Pregenerated sensors for RFC3 (Homo sapiens)
Ensembl gene IDs: ENSG00000133119Ensembl transcript IDs: ENST00000380071.8, ENST00000434425.5, ENST00000616236.1
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATAATGACAAGATCAGTGATCATCTGGGCCAGGGTAGGGATGAACTaGCTGCAAAGGGATATGGAGGGAACTTTTTGGGGTGACGGCATC | + |
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Preference number: 1 (lower is better) Translates to: IMTRSVIIWARVGMN*LQRDMEGTFWGDGI Trigger: GATGCCGTCACCCCAAAAAGTTCCCTCCATATCCCTTTGCAGTCAGTTCATCCCTACCCTGGCCCAGATGATCACTGATCTTGTCATTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| 3UTR-3UTR CCA 90 bp | TTCATAATAACCAAACCTGGAAACAAACCAAAGATCCATCAGCAAGTGAATAGGGACTGCAAAGGGATATaGAGGGAACTTTTTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: FIITKPGNKPKIHQQVNRDCKGI*RELFGV Trigger: CACCCCAAAAAGTTCCCTCCATATCCCTTTGCAGTC...CCTATTCACTTGCTGATGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| 3UTR-3UTR TCA 90 bp | TACTTCGTAGTAAAGGAATTGTTCGGAGTCTGTCACACAAATTTGTCAAGTAAAATCTCCTTTAGCAGGTaGGAGATTAGACGGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: YFVVKELFGVCHTNLSSKISFSR*EIRRKR Trigger: TCTCTTCCGTCTAATCTCTCACCTGCTAAAGGAGAT...TTTACTTGACAAATTTGTGTGACAGACTCCGAACAATTCCTTTACTACGAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| 3UTR-3UTR CCA 90 bp | TTCATAATAACCAAACCTGGAAACAAACCAAAGATCCATCAGCAAGTGAATAGGCAATCATGTTACCTGTaGCAGAAAATGGTCATCTGG | + |
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Preference number: 2 (lower is better) Translates to: FIITKPGNKPKIHQQVNRQSCYL*QKMVIW Trigger: CCAGATGACCATTTTCTGCCACAGGTAACATGATTG...CCTATTCACTTGCTGATGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| 3UTR-3UTR TCA 90 bp | TTCATAATAACCAAACCTGGAAACAAACCAAAGATCCATCAGCAAGTGAATAGGTCCAGAACTTCATTCTaGATTTTCTTCAAGAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: FIITKPGNKPKIHQQVNRSRTSF*IFFKSL Trigger: GAGACTCTTGAAGAAAATTCAGAATGAAGTTCTGGA...CCTATTCACTTGCTGATGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| 3UTR TCA 72 bp | AGTGTTTTGAAGGAGAAGCAGAGGGTTTTGTGGATGTaGTTAGCAGGTGGACCTAACCAGCACAGTGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: SVLKEKQRVLWM*LAGGPNQHSGS Trigger: TGACCCACTGTGCTGGTTAGGTCCACCTGCTAATCACATCCACAAAACCCTCTGCTTCTCCTTCAAAACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| 3UTR CCA 72 bp | AGCTCTGAAGCAGGTGTCAGGACATTCAGAGCAAAGTaGATTATATTTGCAAAACTTCACATGCTAAAAGAT | + |
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Preference number: 3 (lower is better) Translates to: SSEAGVRTFRAK*IIFAKLHMLKD Trigger: ATCTTTTAGCATGTGAAGTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGCTTCAGAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| 3UTR-3UTR CAA 90 bp | TTCATAATAACCAAACCTGGAAACAAACCAAAGATCCATCAGCAAGTGAATAGGGTCTGTCACACAAATTaGTCAAGTAAACCCTTTGGT | + |
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Preference number: 3 (lower is better) Translates to: FIITKPGNKPKIHQQVNRVCHTN*SSKPFG Trigger: ACCAAAGGGTTTACTTGACAAATTTGTGTGACAGAC...CCTATTCACTTGCTGATGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| 3UTR TCA 72 bp | CCCATTCATCAAATTTATTGTCCTCTGAGAAAGACATaGGTTCATCTGATCATTACAGAGGAGATGAGTGTT | + |
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Preference number: 3 (lower is better) Translates to: PIHQIYCPLRKT*VHLIITEEMSV Trigger: AACACTCATCTCCTCTGTAATGATCAGATGAACTCATGTCTTTCTCAGAGGACAATAAATTTGATGAATGGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR TCA 90 bp | AAACTTCACATGCTAAAAGATGAGAGAAGTCCAGTCAGTAGCAAGTTGTTCTTTCCGGGGGCCTACGCTTaGAAATCCCGCGCGAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: KLHMLKDERSPVSSKLFFPGAYA*KSRASA Trigger: CGCGCTCGCGCGGGATTTTCAAGCGTAGGCCCCCGG...AAAGAACAACTTGCTACTGACTGGACTTCTCTCATCTTTTAGCATGTGAAGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434425.5 |
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| CDS-3UTR TCA 90 bp | GCTCTGAAGCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACCTTCGCAAGGCATGCTaGGCATCTTTGGTGAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: ALKQVSGHSEQSGLYLQNLRKAC*ASLVSL Trigger: CAAACTCACCAAAGATGCTCAGCATGCCTTGCGAAG...GTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGCTTCAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434425.5 |
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| CDS-3UTR TCA 90 bp | TTGAGCTCTGAAGCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCACTGAATCTTGAGCTCTaGAGCAGGTGTCAGGACATT | + |
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Preference number: 4 (lower is better) Translates to: LSSEAGVRTFRAKWIIFALNLEL*SRCQDI Trigger: AATGTCCTGACACCTGCTTCAGAGCTCAAGATTCAG...TGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGCTTCAGAGCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR TCA 90 bp | TTTGCAAAACTTCACATGCTAAAAGATGAGAGAAGTCCAGTCAGTAGCAAGTTGCCGTACACTAACAGATaGGGAAAGTCACCACACTGC | + |
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Preference number: 4 (lower is better) Translates to: FAKLHMLKDERSPVSSKLPYTNR*GKSPHC Trigger: GCAGTGTGGTGACTTTCCTCATCTGTTAGTGTACGG...CAACTTGCTACTGACTGGACTTCTCTCATCTTTTAGCATGTGAAGTTTTGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434425.5 |
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| CDS-3UTR TCA 90 bp | TTCATAATAACCAAACCTGGAAACAAACCAAAGATCCATCAGCAAGTGAATAGGCCGTACACTAACAGATaGGGAAAGTCACCACACTGC | + |
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Preference number: 4 (lower is better) Translates to: FIITKPGNKPKIHQQVNRPYTNR*GKSPHC Trigger: GCAGTGTGGTGACTTTCCTCATCTGTTAGTGTACGG...CCTATTCACTTGCTGATGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR TCA 90 bp | TTGAGCTCTGAAGCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCATCAGGAGGAATACAATaGGTTAGAAGCTCATACAGC | + |
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Preference number: 4 (lower is better) Translates to: LSSEAGVRTFRAKWIIFASGGIQ*VRSSYS Trigger: GCTGTATGAGCTTCTAACTCATTGTATTCCTCCTGA...TGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGCTTCAGAGCTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR TCA 90 bp | TTCATAATAACCAAACCTGGAAACAAACCAAAGATCCATCAGCAAGTGAATAGGAGGGTAGGGATGAACTaGCTGCAAAGGGATATGGAG | + |
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Preference number: 4 (lower is better) Translates to: FIITKPGNKPKIHQQVNRRVGMN*LQRDME Trigger: CTCCATATCCCTTTGCAGTCAGTTCATCCCTACCCT...CCTATTCACTTGCTGATGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR TCA 90 bp | AAGCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACTTCACACTGAATCTTGAGCTCTaGAGCAGGTGTCAGGACATT | + |
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Preference number: 4 (lower is better) Translates to: KQVSGHSEQSGLYLQNFTLNLEL*SRCQDI Trigger: AATGTCCTGACACCTGCTTCAGAGCTCAAGATTCAG...TGTGAAGTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR GCA 90 bp | GCTCTGAAGCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACACTGACAATAGCATTTaGAGTCTCCCTCAGATACAC | + |
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Preference number: 4 (lower is better) Translates to: ALKQVSGHSEQSGLYLQNTDNSI*SLPQIH Trigger: GTGTATCTGAGGGAGACTGCAAATGCTATTGTCAGT...GTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGCTTCAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR GCA 90 bp | TTCATAATAACCAAACCTGGAAACAAACCAAAGATCCATCAGCAAGTGAATAGGATGCTCATAGTAAGCTaGCATTTGTGCCACCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: FIITKPGNKPKIHQQVNRMLIVS*HLCHLP Trigger: GGGGAGGTGGCACAAATGGCAGCTTACTATGAGCAT...CCTATTCACTTGCTGATGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR CCA 90 bp | TTCATAATAACCAAACCTGGAAACAAACCAAAGATCCATCAGCAAGTGAATAGGAGATCAGTGATCATCTaGGCCAGGGTAGGGATGAAC | + |
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Preference number: 4 (lower is better) Translates to: FIITKPGNKPKIHQQVNRRSVII*ARVGMN Trigger: GTTCATCCCTACCCTGGCCCAGATGATCACTGATCT...CCTATTCACTTGCTGATGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR TCA 90 bp | TACTTCGTAGTAAAGGAATTGTTCGGAGTCTGTCACACAAATTTGTCAAGTAAACTTCGCAAGGCATGCTaGGCATCTTTGGTGAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: YFVVKELFGVCHTNLSSKLRKAC*ASLVSL Trigger: CAAACTCACCAAAGATGCTCAGCATGCCTTGCGAAG...TTTACTTGACAAATTTGTGTGACAGACTCCGAACAATTCCTTTACTACGAAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR TCA 90 bp | GCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACTTCACATGCTTTGTGGAGTTTGCTaGCTGACAATAGCATTTGCA | + |
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Preference number: 4 (lower is better) Translates to: AGVRTFRAKWIIFAKLHMLCGVC*LTIAFA Trigger: TGCAAATGCTATTGTCAGTCAGCAAACTCCACAAAG...CATGTGAAGTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR TCA 90 bp | CAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACTTCACATGCTCAGGAGGAATACAATaGGTTAGAAGCTCATACAGC | + |
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Preference number: 4 (lower is better) Translates to: QVSGHSEQSGLYLQNFTCSGGIQ*VRSSYS Trigger: GCTGTATGAGCTTCTAACTCATTGTATTCCTCCTGA...GCATGTGAAGTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR TCA 90 bp | CAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACTTCACATGCTATGTCACAGCTTCTTaGTTCCTCCTTACATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: QVSGHSEQSGLYLQNFTCYVTAS*FLLTCL Trigger: AAGGCATGTAAGGAGGAATCAAGAAGCTGTGACATA...GCATGTGAAGTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR TCA 90 bp | TTGAGCTCTGAAGCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCACCTCTGAGAAAGACATaGGTTCATCTGATCATTACA | + |
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Preference number: 4 (lower is better) Translates to: LSSEAGVRTFRAKWIIFAPLRKT*VHLIIT Trigger: TGTAATGATCAGATGAACTCATGTCTTTCTCAGAGG...TGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGCTTCAGAGCTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR GCA 90 bp | CAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACTTCACATGCGTAAAAGGATATTGTTaGACTCTGCAGGCTTCACAC | + |
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Preference number: 4 (lower is better) Translates to: QVSGHSEQSGLYLQNFTCVKGYC*TLQASH Trigger: GTGTGAAGCCTGCAGAGTGCAACAATATCCTTTTAC...GCATGTGAAGTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR GCA 90 bp | CAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACTTCACATGCACTGACAATAGCATTTaGAGTCTCCCTCAGATACAC | + |
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Preference number: 4 (lower is better) Translates to: QVSGHSEQSGLYLQNFTCTDNSI*SLPQIH Trigger: GTGTATCTGAGGGAGACTGCAAATGCTATTGTCAGT...GCATGTGAAGTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR GCA 90 bp | TACTTCGTAGTAAAGGAATTGTTCGGAGTCTGTCACACAAATTTGTCAAGTAAAGTAAGCTGCCATTTGTaGCACCTCCCCTTTCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: YFVVKELFGVCHTNLSSKVSCHL*HLPFQL Trigger: CAACTGAAAGGGGAGGTGGCACAAATGGCAGCTTAC...TTTACTTGACAAATTTGTGTGACAGACTCCGAACAATTCCTTTACTACGAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR TCA 90 bp | AGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACTTCACATGCTTCAACATCTCCTGAATaGCTACTCGGTCACTATTTC | + |
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Preference number: 4 (lower is better) Translates to: RCQDIQSKVDYICKTSHASTSPE*LLGHYF Trigger: GAAATAGTGACCGAGTAGTCATTCAGGAGATGTTGA...AGCATGTGAAGTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434425.5 |
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| CDS-3UTR TCA 90 bp | GCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACTTCACATGGTCTCAGGGATTTCTTaGTCTGCAGTAAAAGGATAT | + |
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Preference number: 4 (lower is better) Translates to: AGVRTFRAKWIIFAKLHMVSGIS*SAVKGY Trigger: ATATCCTTTTACTGCAGATCAAGAAATCCCTGAGAC...CATGTGAAGTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR TCA 90 bp | AGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACTTCACATGCTTATGTCACAGCTTCTTaGTTCCTCCTTACATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: RCQDIQSKVDYICKTSHAYVTAS*FLLTCL Trigger: AAGGCATGTAAGGAGGAATCAAGAAGCTGTGACATA...AGCATGTGAAGTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR TCA 90 bp | CAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACTTCACATGCCCTCTGAGAAAGACATaGGTTCATCTGATCATTACA | + |
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Preference number: 4 (lower is better) Translates to: QVSGHSEQSGLYLQNFTCPLRKT*VHLIIT Trigger: TGTAATGATCAGATGAACTCATGTCTTTCTCAGAGG...GCATGTGAAGTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR GCA 90 bp | AGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACTTCACATGCTGTAAAAGGATATTGTTaGACTCTGCAGGCTTCACAC | + |
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Preference number: 4 (lower is better) Translates to: RCQDIQSKVDYICKTSHAVKGYC*TLQASH Trigger: GTGTGAAGCCTGCAGAGTGCAACAATATCCTTTTAC...AGCATGTGAAGTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR TCA 90 bp | TTCATAATAACCAAACCTGGAAACAAACCAAAGATCCATCAGCAAGTGAATAGGTCAACATCTCCTGAATaGCTACTCGGTCACTATTTC | + |
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Preference number: 4 (lower is better) Translates to: FIITKPGNKPKIHQQVNRSTSPE*LLGHYF Trigger: GAAATAGTGACCGAGTAGTCATTCAGGAGATGTTGA...CCTATTCACTTGCTGATGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR TCA 90 bp | TTCATAATAACCAAACCTGGAAACAAACCAAAGATCCATCAGCAAGTGAATAGGGTTTTCAACATCTCCTaGATGACTACTCGGTCACTA | + |
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Preference number: 4 (lower is better) Translates to: FIITKPGNKPKIHQQVNRVFNIS*MTTRSL Trigger: TAGTGACCGAGTAGTCATTCAGGAGATGTTGAAAAC...CCTATTCACTTGCTGATGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR TCA 90 bp | TTCATAATAACCAAACCTGGAAACAAACCAAAGATCCATCAGCAAGTGAATAGGCTTTGTGGAGTTTGCTaGCTGACAATAGCATTTGCA | + |
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Preference number: 4 (lower is better) Translates to: FIITKPGNKPKIHQQVNRLCGVC*LTIAFA Trigger: TGCAAATGCTATTGTCAGTCAGCAAACTCCACAAAG...CCTATTCACTTGCTGATGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR TCA 90 bp | AAACTTCACATGCTAAAAGATGAGAGAAGTCCAGTCAGTAGCAAGTTGTTCTTTCTTTGTGGAGTTTGCTaGCTGACAATAGCATTTGCA | + |
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Preference number: 4 (lower is better) Translates to: KLHMLKDERSPVSSKLFFLCGVC*LTIAFA Trigger: TGCAAATGCTATTGTCAGTCAGCAAACTCCACAAAG...AAAGAACAACTTGCTACTGACTGGACTTCTCTCATCTTTTAGCATGTGAAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR TCA 90 bp | TTCATAATAACCAAACCTGGAAACAAACCAAAGATCCATCAGCAAGTGAATAGGTCAGGAGGAATACAATaGGTTAGAAGCTCATACAGC | + |
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Preference number: 4 (lower is better) Translates to: FIITKPGNKPKIHQQVNRSGGIQ*VRSSYS Trigger: GCTGTATGAGCTTCTAACTCATTGTATTCCTCCTGA...CCTATTCACTTGCTGATGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR GCA 90 bp | GCTCTGAAGCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACAGGGATTTCTTGATCTaGAGTAAAAGGATATTGTTG | + |
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Preference number: 4 (lower is better) Translates to: ALKQVSGHSEQSGLYLQNRDFLI*SKRILL Trigger: CAACAATATCCTTTTACTGCAGATCAAGAAATCCCT...GTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGCTTCAGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR GCA 90 bp | TTCATAATAACCAAACCTGGAAACAAACCAAAGATCCATCAGCAAGTGAATAGGAGTGATAAATGGCTTTaGTACCCAGCTGTAGACGAT | + |
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Preference number: 4 (lower is better) Translates to: FIITKPGNKPKIHQQVNRSDKWL*YPAVDD Trigger: ATCGTCTACAGCTGGGTAGCAAAGCCATTTATCACT...CCTATTCACTTGCTGATGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR GCA 90 bp | TACTTCGTAGTAAAGGAATTGTTCGGAGTCTGTCACACAAATTTGTCAAGTAAAGAAGTCAGAACATCATaGCTTCCAATCCATCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: YFVVKELFGVCHTNLSSKEVRTS*LPIHPP Trigger: TGGAGGATGGATTGGAAGGCATGATGTTCTGACTTC...TTTACTTGACAAATTTGTGTGACAGACTCCGAACAATTCCTTTACTACGAAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR CCA 90 bp | GCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACTTCACATGACAGTAGATAACACGTaGCAAATATCTTCAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: AGVRTFRAKWIIFAKLHMTVDNT*QISSML Trigger: CAGCATTGAAGATATTTGCCACGTGTTATCTACTGT...CATGTGAAGTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434425.5 |
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| CDS-3UTR CCA 90 bp | GCTCTGAAGCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACGGAAATAAACTTCCATaGTCCCCATTCATCAAATTT | + |
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Preference number: 4 (lower is better) Translates to: ALKQVSGHSEQSGLYLQNGNKLP*SPFIKF Trigger: AAATTTGATGAATGGGGACCATGGAAGTTTATTTCC...GTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGCTTCAGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434425.5 |
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| CDS-3UTR TCA 90 bp | TTCATAATAACCAAACCTGGAAACAAACCAAAGATCCATCAGCAAGTGAATAGGGTCTCAGGGATTTCTTaGTCTGCAGTAAAAGGATAT | + |
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Preference number: 4 (lower is better) Translates to: FIITKPGNKPKIHQQVNRVSGIS*SAVKGY Trigger: ATATCCTTTTACTGCAGATCAAGAAATCCCTGAGAC...CCTATTCACTTGCTGATGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR TCA 90 bp | AAACTTCACATGCTAAAAGATGAGAGAAGTCCAGTCAGTAGCAAGTTGTTCTTTGTCTCAGGGATTTCTTaGTCTGCAGTAAAAGGATAT | + |
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Preference number: 4 (lower is better) Translates to: KLHMLKDERSPVSSKLFFVSGIS*SAVKGY Trigger: ATATCCTTTTACTGCAGATCAAGAAATCCCTGAGAC...AAAGAACAACTTGCTACTGACTGGACTTCTCTCATCTTTTAGCATGTGAAGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR TCA 90 bp | TACTTCGTAGTAAAGGAATTGTTCGGAGTCTGTCACACAAATTTGTCAAGTAAACCAATCCATCCTCCATaGACTTCTTATAAAGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: YFVVKELFGVCHTNLSSKPIHPP*TSYKVP Trigger: TGGCACTTTATAAGAAGTTCATGGAGGATGGATTGG...TTTACTTGACAAATTTGTGTGACAGACTCCGAACAATTCCTTTACTACGAAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR GCA 90 bp | TACTTCGTAGTAAAGGAATTGTTCGGAGTCTGTCACACAAATTTGTCAAGTAAAGTAAAAGGATATTGTTaGACTCTGCAGGCTTCACAC | + |
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Preference number: 4 (lower is better) Translates to: YFVVKELFGVCHTNLSSKVKGYC*TLQASH Trigger: GTGTGAAGCCTGCAGAGTGCAACAATATCCTTTTAC...TTTACTTGACAAATTTGTGTGACAGACTCCGAACAATTCCTTTACTACGAAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR GCA 90 bp | TACTTCGTAGTAAAGGAATTGTTCGGAGTCTGTCACACAAATTTGTCAAGTAAAACTGACAATAGCATTTaGAGTCTCCCTCAGATACAC | + |
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Preference number: 4 (lower is better) Translates to: YFVVKELFGVCHTNLSSKTDNSI*SLPQIH Trigger: GTGTATCTGAGGGAGACTGCAAATGCTATTGTCAGT...TTTACTTGACAAATTTGTGTGACAGACTCCGAACAATTCCTTTACTACGAAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR CCA 90 bp | TACTTCGTAGTAAAGGAATTGTTCGGAGTCTGTCACACAAATTTGTCAAGTAAACAATCATGTTACCTGTaGCAGAAAATGGTCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: YFVVKELFGVCHTNLSSKQSCYL*QKMVIW Trigger: CCAGATGACCATTTTCTGCCACAGGTAACATGATTG...TTTACTTGACAAATTTGTGTGACAGACTCCGAACAATTCCTTTACTACGAAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR GCA 90 bp | TTCATAATAACCAAACCTGGAAACAAACCAAAGATCCATCAGCAAGTGAATAGGAGGGATTTCTTGATCTaGAGTAAAAGGATATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FIITKPGNKPKIHQQVNRRDFLI*SKRILL Trigger: CAACAATATCCTTTTACTGCAGATCAAGAAATCCCT...CCTATTCACTTGCTGATGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR CCA 90 bp | TACTTCGTAGTAAAGGAATTGTTCGGAGTCTGTCACACAAATTTGTCAAGTAAAACAGTAGATAACACGTaGCAAATATCTTCAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: YFVVKELFGVCHTNLSSKTVDNT*QISSML Trigger: CAGCATTGAAGATATTTGCCACGTGTTATCTACTGT...TTTACTTGACAAATTTGTGTGACAGACTCCGAACAATTCCTTTACTACGAAGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR CCA 90 bp | TACTTCGTAGTAAAGGAATTGTTCGGAGTCTGTCACACAAATTTGTCAAGTAAACATAATAACCAAACCTaGAAACAAACCAAAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: YFVVKELFGVCHTNLSSKHNNQT*KQTKDP Trigger: TGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATG...TTTACTTGACAAATTTGTGTGACAGACTCCGAACAATTCCTTTACTACGAAGTA 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR CAA 90 bp | AAACTTCACATGCTAAAAGATGAGAGAAGTCCAGTCAGTAGCAAGTTGTTCTTTCCCGGGGGCCTACGCTaGAAAATCCCGCGCGAGCGC | + |
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Preference number: 5 (lower is better) Translates to: KLHMLKDERSPVSSKLFFPGGLR*KIPRER Trigger: GCGCTCGCGCGGGATTTTCAAGCGTAGGCCCCCGGG...AAAGAACAACTTGCTACTGACTGGACTTCTCTCATCTTTTAGCATGTGAAGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000434425.5 |
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| CDS TCA 90 bp | GCAGTCTCCCTCAGATACACCTCCCAATCTGTCTCAGGGATTTCTTaGTCTGCAGTAAAAGGATATTGTTGCACTCTGCAGGCTTCACAC | + |
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Preference number: 5 (lower is better) Translates to: AVSLRYTSQSVSGIS*SAVKGYCCTLQASH Trigger: GTGTGAAGCCTGCAGAGTGCAACAATATCCTTTTACTGCAGATCAAGAAATCCCTGAGACAGATTGGGAGGTGTATCTGAGGGAGACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380071.8 ENST00000434425.5 ENST00000616236.1 |
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| CDS GCA 90 bp | AACTTCAAGGAGCCTTTGTGGAGTTTGCTGACTGACAATAGCATTTaGAGTCTCCCTCAGATACACCTCCCAATCTGTCTCAGGGATTTC | + |
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Preference number: 5 (lower is better) Translates to: NFKEPLWSLLTDNSI*SLPQIHLPICLRDF Trigger: GAAATCCCTGAGACAGATTGGGAGGTGTATCTGAGGGAGACTGCAAATGCTATTGTCAGTCAGCAAACTCCACAAAGGCTCCTTGAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380071.8 ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR CAA 90 bp | GAAGCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACTTCACCCAGTCAGTAGCAAGTaGTTCTTTGGAGGTCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: EAGVRTFRAKWIIFAKLHPVSSK*FFGGPQ Trigger: CTGAGGACCTCCAAAGAACAACTTGCTACTGACTGG...GTGAAGTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS TCA 90 bp | AGTTCTGAGAGAAGGCCCTTCATTATTATCTCAGGAGGAATACAATaGGTTAGAAGCTCATACAGCCTTCCACGAACTTCAAGGAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: SSERRPFIIISGGIQ*VRSSYSLPRTSRSL Trigger: AAGGCTCCTTGAAGTTCGTGGAAGGCTGTATGAGCTTCTAACTCATTGTATTCCTCCTGAGATAATAATGAAGGGCCTTCTCTCAGAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR CAA 90 bp | TTGAGCTCTGAAGCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCATGCAGTAAAAGGATATaGTTGCACTCTGCAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSSEAGVRTFRAKWIIFACSKRI*LHSAGF Trigger: GAAGCCTGCAGAGTGCAACAATATCCTTTTACTGCA...TGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGCTTCAGAGCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS TCA 90 bp | GATTCCTCCTTACATGCCTTCATTATTATCTCAGGAGGAATACAATaGGTTAGAAGCTCATACAGCCTTCCACGAACTTCAAGGAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: DSSLHAFIIISGGIQ*VRSSYSLPRTSRSL Trigger: AAGGCTCCTTGAAGTTCGTGGAAGGCTGTATGAGCTTCTAACTCATTGTATTCCTCCTGAGATAATAATGAAGGCATGTAAGGAGGAATC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR CAA 90 bp | GCTCTGAAGCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACAGTAAAAGGATATTGTaGCACTCTGCAGGCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: ALKQVSGHSEQSGLYLQNSKRIL*HSAGFT Trigger: TGTGAAGCCTGCAGAGTGCAACAATATCCTTTTACT...GTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGCTTCAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR CAA 90 bp | AAGCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACTTCACAAACTTCAAGGAGCCTTaGTGGAGTTTGCTGACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KQVSGHSEQSGLYLQNFTNFKEP*WSLLTD Trigger: GTCAGTCAGCAAACTCCACAAAGGCTCCTTGAAGTT...TGTGAAGTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR CAA 90 bp | TTTGCAAAACTTCACATGCTAAAAGATGAGAGAAGTCCAGTCAGTAGCAAGTTGAACTTCAAGGAGCCTTaGTGGAGTTTGCTGACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FAKLHMLKDERSPVSSKLNFKEP*WSLLTD Trigger: GTCAGTCAGCAAACTCCACAAAGGCTCCTTGAAGTT...CAACTTGCTACTGACTGGACTTCTCTCATCTTTTAGCATGTGAAGTTTTGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR CAA 90 bp | AAACTTCACATGCTAAAAGATGAGAGAAGTCCAGTCAGTAGCAAGTTGTTCTTTCCAGTCAGTAGCAAGTaGTTCTTTGGAGGTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KLHMLKDERSPVSSKLFFPVSSK*FFGGPQ Trigger: CTGAGGACCTCCAAAGAACAACTTGCTACTGACTGG...AAAGAACAACTTGCTACTGACTGGACTTCTCTCATCTTTTAGCATGTGAAGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR CAA 90 bp | GCTCTGAAGCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACTGTCTCAGGGATTTCTaGATCTGCAGTAAAAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: ALKQVSGHSEQSGLYLQNCLRDF*ICSKRI Trigger: TATCCTTTTACTGCAGATCAAGAAATCCCTGAGACA...GTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGCTTCAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR CAA 90 bp | TTCATAATAACCAAACCTGGAAACAAACCAAAGATCCATCAGCAAGTGAATAGGAACTTCAAGGAGCCTTaGTGGAGTTTGCTGACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FIITKPGNKPKIHQQVNRNFKEP*WSLLTD Trigger: GTCAGTCAGCAAACTCCACAAAGGCTCCTTGAAGTT...CCTATTCACTTGCTGATGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR CAA 90 bp | TACTTCGTAGTAAAGGAATTGTTCGGAGTCTGTCACACAAATTTGTCAAGTAAAATAGTAAGCTGCCATTaGTGCCACCTCCCCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: YFVVKELFGVCHTNLSSKIVSCH*CHLPFQ Trigger: CTGAAAGGGGAGGTGGCACAAATGGCAGCTTACTAT...TTTACTTGACAAATTTGTGTGACAGACTCCGAACAATTCCTTTACTACGAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR CAA 90 bp | AAGCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACTTCACAAGTAAAAGGATATTGTaGCACTCTGCAGGCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: KQVSGHSEQSGLYLQNFTSKRIL*HSAGFT Trigger: TGTGAAGCCTGCAGAGTGCAACAATATCCTTTTACT...TGTGAAGTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR CAA 90 bp | GCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACTTCACATGTGTCTCAGGGATTTCTaGATCTGCAGTAAAAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: AGVRTFRAKWIIFAKLHMCLRDF*ICSKRI Trigger: TATCCTTTTACTGCAGATCAAGAAATCCCTGAGACA...CATGTGAAGTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR CAA 90 bp | AAGCAGGTGTCAGGACATTCAGAGCAAAGTGGATTATATTTGCAAAACTTCACAGTAGCAAGTTGTTCTTaGGAGGTCCTCAGAATATGT | + |
|
Preference number: 5 (lower is better) Translates to: KQVSGHSEQSGLYLQNFTVASCS*EVLRIC Trigger: ACATATTCTGAGGACCTCCAAAGAACAACTTGCTAC...TGTGAAGTTTTGCAAATATAATCCACTTTGCTCTGAATGTCCTGACACCTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR CAA 90 bp | TTTGCAAAACTTCACATGCTAAAAGATGAGAGAAGTCCAGTCAGTAGCAAGTTGGTAGCAAGTTGTTCTTaGGAGGTCCTCAGAATATGT | + |
|
Preference number: 5 (lower is better) Translates to: FAKLHMLKDERSPVSSKLVASCS*EVLRIC Trigger: ACATATTCTGAGGACCTCCAAAGAACAACTTGCTAC...CAACTTGCTACTGACTGGACTTCTCTCATCTTTTAGCATGTGAAGTTTTGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR CAA 90 bp | TTCATAATAACCAAACCTGGAAACAAACCAAAGATCCATCAGCAAGTGAATAGGAGTAAAAGGATATTGTaGCACTCTGCAGGCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: FIITKPGNKPKIHQQVNRSKRIL*HSAGFT Trigger: TGTGAAGCCTGCAGAGTGCAACAATATCCTTTTACT...CCTATTCACTTGCTGATGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR CAA 90 bp | TACTTCGTAGTAAAGGAATTGTTCGGAGTCTGTCACACAAATTTGTCAAGTAAATGCAGTAAAAGGATATaGTTGCACTCTGCAGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YFVVKELFGVCHTNLSSKCSKRI*LHSAGF Trigger: GAAGCCTGCAGAGTGCAACAATATCCTTTTACTGCA...TTTACTTGACAAATTTGTGTGACAGACTCCGAACAATTCCTTTACTACGAAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR CAA 90 bp | AAACTTCACATGCTAAAAGATGAGAGAAGTCCAGTCAGTAGCAAGTTGTTCTTTATATGTCACAGCTTCTaGATTCCTCCTTACATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KLHMLKDERSPVSSKLFFICHSF*IPPYMP Trigger: AGGCATGTAAGGAGGAATCAAGAAGCTGTGACATAT...AAAGAACAACTTGCTACTGACTGGACTTCTCTCATCTTTTAGCATGTGAAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS-3UTR CAA 90 bp | TTCATAATAACCAAACCTGGAAACAAACCAAAGATCCATCAGCAAGTGAATAGGTGTCTCAGGGATTTCTaGATCTGCAGTAAAAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: FIITKPGNKPKIHQQVNRCLRDF*ICSKRI Trigger: TATCCTTTTACTGCAGATCAAGAAATCCCTGAGACA...CCTATTCACTTGCTGATGGATCTTTGGTTTGTTTCCAGGTTTGGTTATTATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR CAA 90 bp | TACTTCGTAGTAAAGGAATTGTTCGGAGTCTGTCACACAAATTTGTCAAGTAAATTCGTAGTAAAGGAATaGTTCGGAGTCTGTCACACA | + |
|
Preference number: 5 (lower is better) Translates to: YFVVKELFGVCHTNLSSKFVVKE*FGVCHT Trigger: TGTGTGACAGACTCCGAACAATTCCTTTACTACGAA...TTTACTTGACAAATTTGTGTGACAGACTCCGAACAATTCCTTTACTACGAAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS-3UTR CAA 90 bp | TTTGCAAAACTTCACATGCTAAAAGATGAGAGAAGTCCAGTCAGTAGCAAGTTGAACAATATCATTTTATaGCAGGGTGGCATAGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: FAKLHMLKDERSPVSSKLNNIIL*QGGIGS Trigger: ACTACCTATGCCACCCTGCAATAAAATGATATTGTT...CAACTTGCTACTGACTGGACTTCTCTCATCTTTTAGCATGTGAAGTTTTGCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000434425.5 |
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| CDS-3UTR CAA 90 bp | TACTTCGTAGTAAAGGAATTGTTCGGAGTCTGTCACACAAATTTGTCAAGTAAAGTCTGTCACACAAATTaGTCAAGTAAACCCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: YFVVKELFGVCHTNLSSKVCHTN*SSKPFG Trigger: ACCAAAGGGTTTACTTGACAAATTTGTGTGACAGAC...TTTACTTGACAAATTTGTGTGACAGACTCCGAACAATTCCTTTACTACGAAGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS TCA 72 bp | GGCTCATGGCAGCTCGAGTTCCCGGGGGCCTACGCTTaGAAATCCCGCGCGAGCGCGCGTCCTCCCCACAAC | + |
|
Preference number: 6 (lower is better) Translates to: GSWQLEFPGAYA*KSRASARPPHN Trigger: GTTGTGGGGAGGACGCGCGCTCGCGCGGGATTTTCAAGCGTAGGCCCCCGGGAACTCGAGCTGCCATGAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434425.5 |
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| CDS GCA 72 bp | GAGCCTTTGTGGAGTTTGCTGACTGACAATAGCATTTaGAGTCTCCCTCAGATACACCTCCCAATCTGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: EPLWSLLTDNSI*SLPQIHLPICL Trigger: GAGACAGATTGGGAGGTGTATCTGAGGGAGACTGCAAATGCTATTGTCAGTCAGCAAACTCCACAAAGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380071.8 ENST00000434425.5 ENST00000616236.1 |
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| CDS CAA 90 bp | TGCAGTCTCCCTCAGATACACCTCCCAATCTGTCTCAGGGATTTCTaGATCTGCAGTAAAAGGATATTGTTGCACTCTGCAGGCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: CSLPQIHLPICLRDF*ICSKRILLHSAGFT Trigger: TGTGAAGCCTGCAGAGTGCAACAATATCCTTTTACTGCAGATCAAGAAATCCCTGAGACAGATTGGGAGGTGTATCTGAGGGAGACTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380071.8 ENST00000434425.5 ENST00000616236.1 |
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| CDS TCA 72 bp | CTTCCACGAACTTCAAGGAGCCTTTGTGGAGTTTGCTaGCTGACAATAGCATTTGCAGTCTCCCTCAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: LPRTSRSLCGVC*LTIAFAVSLRY Trigger: GTATCTGAGGGAGACTGCAAATGCTATTGTCAGTCAGCAAACTCCACAAAGGCTCCTTGAAGTTCGTGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380071.8 ENST00000434425.5 ENST00000616236.1 |
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| CDS TCA 72 bp | CTCAGATACACCTCCCAATCTGTCTCAGGGATTTCTTaGTCTGCAGTAAAAGGATATTGTTGCACTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRYTSQSVSGIS*SAVKGYCCTLQ Trigger: CTGCAGAGTGCAACAATATCCTTTTACTGCAGATCAAGAAATCCCTGAGACAGATTGGGAGGTGTATCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380071.8 ENST00000434425.5 ENST00000616236.1 |
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| CDS GCA 72 bp | ATACACCTCCCAATCTGTCTCAGGGATTTCTTGATCTaGAGTAAAAGGATATTGTTGCACTCTGCAGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IHLPICLRDFLI*SKRILLHSAGF Trigger: GAAGCCTGCAGAGTGCAACAATATCCTTTTACTGCAGATCAAGAAATCCCTGAGACAGATTGGGAGGTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380071.8 ENST00000434425.5 ENST00000616236.1 |
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| CDS CAA 72 bp | CCTCAGATACACCTCCCAATCTGTCTCAGGGATTTCTaGATCTGCAGTAAAAGGATATTGTTGCACTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PQIHLPICLRDF*ICSKRILLHSA Trigger: TGCAGAGTGCAACAATATCCTTTTACTGCAGATCAAGAAATCCCTGAGACAGATTGGGAGGTGTATCTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000380071.8 ENST00000434425.5 ENST00000616236.1 |
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| CDS TCA 72 bp | AGAAGGCCCTTCATTATTATCTCAGGAGGAATACAATaGGTTAGAAGCTCATACAGCCTTCCACGAACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RRPFIIISGGIQ*VRSSYSLPRTS Trigger: TGAAGTTCGTGGAAGGCTGTATGAGCTTCTAACTCATTGTATTCCTCCTGAGATAATAATGAAGGGCCTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380071.8 |
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| CDS CAA 72 bp | AAGATGAGAGAAGTCCAGTCAGTAGCAAGTTGTTCTTaGGAGGTCCTCAGAATATGTCACAGCTTCTTGATT | + |
|
Preference number: 6 (lower is better) Translates to: KMREVQSVASCS*EVLRICHSFLI Trigger: AATCAAGAAGCTGTGACATATTCTGAGGACCTCCAAAGAACAACTTGCTACTGACTGGACTTCTCTCATCTT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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| CDS TCA 72 bp | TTACATGCCTTCATTATTATCTCAGGAGGAATACAATaGGTTAGAAGCTCATACAGCCTTCCACGAACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LHAFIIISGGIQ*VRSSYSLPRTS Trigger: TGAAGTTCGTGGAAGGCTGTATGAGCTTCTAACTCATTGTATTCCTCCTGAGATAATAATGAAGGCATGTAA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000434425.5 ENST00000616236.1 |
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