RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RFC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000049541

Ensembl transcript IDs: ENST00000055077.8, ENST00000352131.7, ENST00000463194.1, ENST00000470266.5, ENST00000479105.6, ENST00000480432.5, ENST00000485545.5, ENST00000491206.5, ENST00000493156.6, ENST00000494019.5, ENST00000497430.1, ENST00000621097.4

Found 438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCGCCCTCAGCTTCTCTGCGCCTTTCCGCCCCGTCACCGCATCAATaGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACGTCCC +
Preference number: 1 (lower is better)
Translates to: PPSASLRLSAPSPHQ*GGGQTQTLAGHRRP
Trigger: GGGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAGAGAAGCTGAGGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
3UTR CCA 90 bp CAGGGCCCGGGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTaGAGGGCCCTGGGAATGAGATCTCCAGTAAAGACTTCAAACCAC +
Preference number: 1 (lower is better)
Translates to: QGPGQAQNACGLAGS*RALGMRSPVKTSNH
Trigger: GTGGTTTGAAGTCTTTACTGGAGATCTCATTCCCAGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCGGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479105.6
3UTR-3UTR GCA 90 bp TTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGAGGCGTGAGCTACCGTaGCTGGCCAGCCACTGGAGT +
Preference number: 2 (lower is better)
Translates to: FRPVTASMGWRPNSNTCGRRELP*LASHWS
Trigger: ACTCCAGTGGCTGGCCAGGCACGGTAGCTCACGCCT...CCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
3UTR-3UTR GCA 90 bp ACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACGTCCAGGCGTGAGCTACCGTaGCTGGCCAGCCACTGGAGT +
Preference number: 2 (lower is better)
Translates to: TASMGWRPNSNTCGAQTSRRELP*LASHWS
Trigger: ACTCCAGTGGCTGGCCAGGCACGGTAGCTCACGCCT...GGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
3UTR-3UTR CCA 90 bp CTGTTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCGGCATCTTTGAGTGCTaGGCCCAGCAGGGCCCGGGC +
Preference number: 2 (lower is better)
Translates to: LLMKPNPEKVDCRLFSACGIFEC*AQQGPG
Trigger: GCCCGGGCCCTGCTGGGCCCAGCACTCAAAGATGCC...GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR CCA 90 bp ATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTGGCATCTTTGAGTGCTaGGCCCAGCAGGGCCCGGGC +
Preference number: 2 (lower is better)
Translates to: MGSMILSEALQARAKRVVGIFEC*AQQGPG
Trigger: GCCCGGGCCCTGCTGGGCCCAGCACTCAAAGATGCC...AACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR TCA 90 bp CACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACGTCCTGGTCTTGAACTTCTaGCCTCAGGTGATCCACCTG +
Preference number: 2 (lower is better)
Translates to: HRINGVEAKLKHLRGTDVLVLNF*PQVIHL
Trigger: CAGGTGGATCACCTGAGGTCAGAAGTTCAAGACCAG...GACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
3UTR-3UTR TCA 90 bp TGTGTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGACATTCATCAGCCTGGTaGGGATCTGGGCGTCGGTCA +
Preference number: 2 (lower is better)
Translates to: CVPEDCTAGLNGLDDLIRHSSAW*GSGRRS
Trigger: TGACCGACGCCCAGATCCTCACCAGGCTGATGAATG...TCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
3UTR-3UTR GCA 90 bp CCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTGAATGCTTGTGGTCTTaGCGGTTCCTGGAGGGCCCT +
Preference number: 2 (lower is better)
Translates to: PEDCTAGLNGLDDLIRSIECLWS*RFLEGP
Trigger: AGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTC...AATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
3UTR-3UTR GCA 90 bp TTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTGCATGGCATCTTTGAGTaGTGGGCCCAGCAGGGCCCG +
Preference number: 2 (lower is better)
Translates to: FSITFISLVRIWASVSFVHGIFE*WAQQGP
Trigger: CGGGCCCTGCTGGGCCCAGCACTCAAAGATGCCATG...CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR GCA 90 bp TCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTCATGGCATCTTTGAGTaGTGGGCCCAGCAGGGCCCG +
Preference number: 2 (lower is better)
Translates to: SFSITFISLVRIWASVSFHGIFE*WAQQGP
Trigger: CGGGCCCTGCTGGGCCCAGCACTCAAAGATGCCATG...AAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR GCA 90 bp TGTGTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAGTTCTCCTCAAGGCTTaGTGGGCTCCGTCGGTCATG +
Preference number: 2 (lower is better)
Translates to: CVPEDCTAGLNGLDDLIRVLLKA*WAPSVM
Trigger: CATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAAC...TCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR GCA 90 bp CCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTGTTCTCCTCAAGGCTTaGTGGGCTCCGTCGGTCATG +
Preference number: 2 (lower is better)
Translates to: PEDCTAGLNGLDDLIRSIVLLKA*WAPSVM
Trigger: CATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAAC...AATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR GCA 90 bp TGTGTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGATGTGTACCGGAGGACTaGACAGCGGGACTGAATGGG +
Preference number: 2 (lower is better)
Translates to: CVPEDCTAGLNGLDDLIRCVPED*TAGLNG
Trigger: CCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA...TCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
3UTR-3UTR GCA 90 bp AAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCTCATGTCTGAATGCTTGTGGTCTTaGCGGTTCCTGGAGGGCCCG +
Preference number: 2 (lower is better)
Translates to: KPNPEKVDCRLFSACLMSECLWS*RFLEGP
Trigger: CGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTC...AGACATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR CCA 90 bp CAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAAAAGGACAGTCATGTTaGCTCCAGCCTAAGGCGGCA +
Preference number: 2 (lower is better)
Translates to: QPKAAFSPIRKPRLLYLRKGQSC*LQPKAA
Trigger: TGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTT...TCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
3UTR-3UTR CCA 90 bp CCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTGGTCTTGCCGGTTCCTaGAGGGCCCGCAATGATGAT +
Preference number: 2 (lower is better)
Translates to: PEDCTAGLNGLDDLIRSIGLAGS*RARNDD
Trigger: ATCATCATTGCGGGCCCTCCAGGAACCGGCAAGACC...AATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR TCA 90 bp CTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTCATTCATCAGCCTGGTaGGGATCTGGGCGTCGGTCA +
Preference number: 2 (lower is better)
Translates to: LLLDNIHQPGEDLGVGQLHSSAW*GSGRRS
Trigger: TGACCGACGCCCAGATCCTCACCAGGCTGATGAATG...AAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
3UTR-3UTR GCA 90 bp TGCGGGGCACAGACGTCCCAGAAGCAAACATGCAAGTCACGGGAGTTTATTTATAGGCGTGAGCTACCGTaGCTGGCCAGCCACTGGAGT +
Preference number: 2 (lower is better)
Translates to: CGAQTSQKQTCKSREFIYRRELP*LASHWS
Trigger: ACTCCAGTGGCTGGCCAGGCACGGTAGCTCACGCCT...ATAAATAAACTCCCGTGACTTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
3UTR-3UTR GCA 90 bp TTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGGCGTGAGCTACCGTaGCTGGCCAGCCACTGGAGT +
Preference number: 2 (lower is better)
Translates to: LKDSHVGSSLRRHFPPSERRELP*LASHWS
Trigger: ACTCCAGTGGCTGGCCAGGCACGGTAGCTCACGCCT...TTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
3UTR-3UTR GCA 90 bp CCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTGGGCCAAGCACAGAATaGTTGTGGTCTTGCCGGTTC +
Preference number: 2 (lower is better)
Translates to: PEDCTAGLNGLDDLIRSIGPSTE*LWSCRF
Trigger: GAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCC...AATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR GCA 90 bp TGTGTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAGGGCTCCGTCGGTCATaGTGTCTGCTTCATCCAGAA +
Preference number: 2 (lower is better)
Translates to: CVPEDCTAGLNGLDDLIRGLRRS*CLLHPE
Trigger: TTCTGGATGAAGCAGACAGCATGACCGACGGAGCCC...TCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
3UTR-3UTR CCA 90 bp CACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACGTCTGCCTGGCCAGCCACTaGAGTTTAAAGGACAGTCAT +
Preference number: 2 (lower is better)
Translates to: HRINGVEAKLKHLRGTDVCLASH*SLKDSH
Trigger: ATGACTGTCCTTTAAACTCCAGTGGCTGGCCAGGCA...GACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
3UTR-3UTR CCA 90 bp GCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGGTCTTGCCGGTTCCTaGAGGGCCCTGGGAATGAGA +
Preference number: 2 (lower is better)
Translates to: AGLNGLDDLIRSITSKGEGLAGS*RALGMR
Trigger: TCTCATTCCCAGGGCCCTCCAGGAACCGGCAAGACC...TTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
3UTR-3UTR CCA 90 bp CAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCCCTGGGAATGAGAAGCACAGAATGCTTGTaGTCTTGCCGGTTCCTGGAG +
Preference number: 2 (lower is better)
Translates to: QAQNACGLAGSWRALGMRSTECL*SCRFLE
Trigger: CTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCT...TCTCATTCCCAGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
3UTR-3UTR CCA 90 bp TCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGGGCATCTTTGAGTGCTaGGCCCAGCAGGGCCCGGGC +
Preference number: 2 (lower is better)
Translates to: SMILSEALQARAKRVVLEGIFEC*AQQGPG
Trigger: GCCCGGGCCCTGCTGGGCCCAGCACTCAAAGATGCC...CTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR CCA 90 bp TTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTGCTCCTCAAGGCTTGCTaGGCTCCGTCGGTCATGCTG +
Preference number: 2 (lower is better)
Translates to: FSITFISLVRIWASVSFVLLKAC*APSVML
Trigger: CAGCATGACCGACGGAGCCCAGCAAGCCTTGAGGAG...CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR CCA 90 bp TCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTCTCCTCAAGGCTTGCTaGGCTCCGTCGGTCATGCTG +
Preference number: 2 (lower is better)
Translates to: SFSITFISLVRIWASVSFLLKAC*APSVML
Trigger: CAGCATGACCGACGGAGCCCAGCAAGCCTTGAGGAG...AAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR TCA 90 bp CTGTTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCATTCATCAGCCTGGTaGGGATCTGGGCGTCGGTCA +
Preference number: 2 (lower is better)
Translates to: LLMKPNPEKVDCRLFSACHSSAW*GSGRRS
Trigger: TGACCGACGCCCAGATCCTCACCAGGCTGATGAATG...GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
3UTR-3UTR GCA 90 bp TTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCTCGTTCTCCTCAAGGCTTaGTGGGCTCCGTCGGTCATG +
Preference number: 2 (lower is better)
Translates to: LMKPNPEKVDCRLFSACLVLLKA*WAPSVM
Trigger: CATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAAC...GAGGCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR GCA 90 bp CTGTTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCGTTCTCCTCAAGGCTTaGTGGGCTCCGTCGGTCATG +
Preference number: 2 (lower is better)
Translates to: LLMKPNPEKVDCRLFSACVLLKA*WAPSVM
Trigger: CATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAAC...GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR CCA 90 bp CTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCGGCATCTTTGAGTGCTaGGCCCAGCAGGGCCCGGGC +
Preference number: 2 (lower is better)
Translates to: LIRSITSKGEASGFRVDFGIFEC*AQQGPG
Trigger: GCCCGGGCCCTGCTGGGCCCAGCACTCAAAGATGCC...GAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR CCA 90 bp GGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTCTCCTCAAGGCTTGCTaGGCTCCGTCGGTCATGCTG +
Preference number: 2 (lower is better)
Translates to: GLDDLIRSITSKGEASGFLLKAC*APSVML
Trigger: CAGCATGACCGACGGAGCCCAGCAAGCCTTGAGGAG...AAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR CCA 90 bp TTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCTCGGTCTTGCCGGTTCCTaGAGGGCCCGCAATGATGAT +
Preference number: 2 (lower is better)
Translates to: LMKPNPEKVDCRLFSACLGLAGS*RARNDD
Trigger: ATCATCATTGCGGGCCCTCCAGGAACCGGCAAGACC...GAGGCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR GCA 90 bp TTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCTCGGGCCAAGCACAGAATaGTTGTGGTCTTGCCGGTTC +
Preference number: 2 (lower is better)
Translates to: LMKPNPEKVDCRLFSACLGPSTE*LWSCRF
Trigger: GAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCC...GAGGCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR GCA 90 bp ATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTGTTCTCCTCAAGGCTTaGTGGGCTCCGTCGGTCATG +
Preference number: 2 (lower is better)
Translates to: MGSMILSEALQARAKRVVVLLKA*WAPSVM
Trigger: CATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAAC...AACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR GCA 90 bp ATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTGTGTACCGGAGGACTaGACAGCGGGACTGAATGGG +
Preference number: 2 (lower is better)
Translates to: MGSMILSEALQARAKRVVCVPED*TAGLNG
Trigger: CCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA...AACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
3UTR-3UTR GCA 90 bp TGTGTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGACAAAGACCTCTAGCCTaGTCACGGTGTCTTCATTCC +
Preference number: 2 (lower is better)
Translates to: CVPEDCTAGLNGLDDLIRQRPLA*SRCLHS
Trigger: GGAATGAAGACACCGTGAGCAGGCTAGAGGTCTTTG...TCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493156.6
3UTR-3UTR CCA 90 bp GGCTCGTCACAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGGGTCTTGCCGGTTCCTaGAGGGCCCTGGGAATGAGA +
Preference number: 2 (lower is better)
Translates to: GSSQTLNTFSLLMKPNPEGLAGS*RALGMR
Trigger: TCTCATTCCCAGGGCCCTCCAGGAACCGGCAAGACC...CTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470266.5
ENST00000479105.6
3UTR-3UTR GCA 90 bp AGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATGGTTCTCCTCAAGGCGGGCCAAGCACAGAATaGTTGTGGTCTTGCCGGTTC +
Preference number: 2 (lower is better)
Translates to: SKGEASGFRVDFHGSPQGGPSTE*LWSCRF
Trigger: GAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCC...GCCTTGAGGAGAACCATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR GCA 90 bp TCGTCACAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGCATGGCATCTTTGAGTaGTGGGCCCAGCAGGGCCCG +
Preference number: 2 (lower is better)
Translates to: SSQTLNTFSLLMKPNPEKHGIFE*WAQQGP
Trigger: CGGGCCCTGCTGGGCCCAGCACTCAAAGATGCCATG...CTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTGTGACGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
3UTR-3UTR GCA 90 bp CTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGGCTCCGTCGGTCATaGTGTCTGCTTCATCCAGAA +
Preference number: 2 (lower is better)
Translates to: LNGLDDLIRSITSKGEASGLRRS*CLLHPE
Trigger: TTCTGGATGAAGCAGACAGCATGACCGACGGAGCCC...ACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
3UTR-3UTR GCA 90 bp AGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCTCATGTCTCATGTTCACTGCTGTTTaGATCTCCGTCACCTCTGAC +
Preference number: 2 (lower is better)
Translates to: SQILRRWTAGCSAPASCLMFTAV*ISVTSD
Trigger: GTCAGAGGTGACGGAGATGCAAACAGCAGTGAACAT...GAGACATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479105.6
3UTR-3UTR TCA 90 bp TGCGGGGCACAGACGTCCCAGAAGCAAACATGCAAGTCACGGGAGTTTATTTATCTGGTCTTGAACTTCTaGCCTCAGGTGATCCACCTG +
Preference number: 2 (lower is better)
Translates to: CGAQTSQKQTCKSREFIYLVLNF*PQVIHL
Trigger: CAGGTGGATCACCTGAGGTCAGAAGTTCAAGACCAG...ATAAATAAACTCCCGTGACTTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
3UTR-3UTR GCA 90 bp CCTCTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGTCCTCACAACGTCAATaGCCCTGTCATTTGAAGCAT +
Preference number: 2 (lower is better)
Translates to: PLLLDNIHQPGEDLGVGQSSQRQ*PCHLKH
Trigger: ATGCTTCAAATGACAGGGGCATTGACGTTGTGAGGA...CTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000491206.5
3UTR-3UTR GCA 90 bp TTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCTCCAGAAATCACACCACTaGACTCCAGCCTGTGTGACA +
Preference number: 2 (lower is better)
Translates to: LMKPNPEKVDCRLFSACLQKSHH*TPACVT
Trigger: TGTCACACAGGCTGGAGTGCAGTGGTGTGATTTCTG...GAGGCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493156.6
3UTR-3UTR CCA 90 bp AGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAAAAGGACAGTCATGTTaGCTCCAGCCTAAGGCGGCA +
Preference number: 2 (lower is better)
Translates to: SLKDSHVGSSLRRHFPPSKGQSC*LQPKAA
Trigger: TGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTT...TGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
3UTR-3UTR CCA 90 bp GGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGCACAGAATGCTTGTaGTCTTGCCGGTTCCTGGAG +
Preference number: 2 (lower is better)
Translates to: GLDDLIRSITSKGEASGFSTECL*SCRFLE
Trigger: CTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCT...AAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR TCA 90 bp CCTGGAGGGCCCGCAATGATGATGTTGGGCACATTTCCTTCCCTTGCAAAGACCAATGCCCCTGTCATTTaGAGCATTGAGTTCCAACAT +
Preference number: 2 (lower is better)
Translates to: PGGPAMMMLGTFPSLAKTNAPVI*SIEFQH
Trigger: ATGTTGGAACTCAATGCTTCAAATGACAGGGGCATT...GGTCTTTGCAAGGGAAGGAAATGTGCCCAACATCATCATTGCGGGCCCTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491206.5
3UTR-3UTR TCA 90 bp CTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTACTGAATGGGCTCGATaGTCTTATCCGAAGCATTAC +
Preference number: 2 (lower is better)
Translates to: LLLDNIHQPGEDLGVGQLTEWAR*SYPKHY
Trigger: GTAATGCTTCGGATAAGATCATCGAGCCCATTCAGT...AAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
3UTR-3UTR TCA 90 bp ATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTAGGCTGAGGCAGAATTaGTTGAACCAGGGAGATGCA +
Preference number: 2 (lower is better)
Translates to: MGSMILSEALQARAKRVVRLRQN*LNQGDA
Trigger: TGCATCTCCCTGGTTCAATCAATTCTGCCTCAGCCT...AACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493156.6
3UTR-3UTR GCA 90 bp TCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGGGGCTCCGTCGGTCATaGTGTCTGCTTCATCCAGAA +
Preference number: 2 (lower is better)
Translates to: SMILSEALQARAKRVVLEGLRRS*CLLHPE
Trigger: TTCTGGATGAAGCAGACAGCATGACCGACGGAGCCC...CTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
3UTR-3UTR GCA 90 bp GATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTATGTGTACCGGAGGACTaGACAGCGGGACTGAATGGG +
Preference number: 2 (lower is better)
Translates to: DDLIRSITSKGEASGFRVCVPED*TAGLNG
Trigger: CCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA...TACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR GCA 90 bp TCGTCACAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGCCTGAGAAGGTGGACTaGAGGTTGTTCAGCGCCTGC +
Preference number: 2 (lower is better)
Translates to: SSQTLNTFSLLMKPNPEKPEKVD*RLFSAC
Trigger: GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGG...CTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTGTGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
3UTR-3UTR GCA 90 bp AGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAAGGAGGCCTGCCATCTaGAAAAGAGAGTTCACTCCT +
Preference number: 2 (lower is better)
Translates to: SLKDSHVGSSLRRHFPPSRRPAI*KREFTP
Trigger: AGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTCCT...TGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000485545.5
3UTR-3UTR CCA 90 bp AGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCATGCCTGGCCAGCCACTaGAGTTTAAAGGACAGTCAT +
Preference number: 2 (lower is better)
Translates to: SLKDSHVGSSLRRHFPPSCLASH*SLKDSH
Trigger: ATGACTGTCCTTTAAACTCCAGTGGCTGGCCAGGCA...TGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
3UTR-3UTR CCA 90 bp TTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAATGCCTGGCCAGCCACTaGAGTTTAAAGGACAGTCAT +
Preference number: 2 (lower is better)
Translates to: LKDSHVGSSLRRHFPPSECLASH*SLKDSH
Trigger: ATGACTGTCCTTTAAACTCCAGTGGCTGGCCAGGCA...TTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
3UTR-3UTR CCA 90 bp TCGTCACAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGAGCCTGGTGAGGATCTaGGCGTCGGTCAGCTTTGTG +
Preference number: 2 (lower is better)
Translates to: SSQTLNTFSLLMKPNPEKSLVRI*ASVSFV
Trigger: CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCT...CTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTGTGACGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
3UTR-3UTR TCA 90 bp TCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGACTGCACAGCGGGACTaGATGGGCTCGATGATCTTA +
Preference number: 2 (lower is better)
Translates to: SMILSEALQARAKRVVLETAQRD*MGSMIL
Trigger: TAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGT...CTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR GCA 90 bp CTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTTCCTCACAACGTCAATaGCCCTGTCATTTGAAGCAT +
Preference number: 2 (lower is better)
Translates to: LNGLDDLIRSITSKGEASSSQRQ*PCHLKH
Trigger: ATGCTTCAAATGACAGGGGCATTGACGTTGTGAGGA...ACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000491206.5
3UTR-3UTR GCA 90 bp GGCTCGTCACAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGGTCGGTCATGCTGTCTaGTTCATCCAGAATGATGAT +
Preference number: 2 (lower is better)
Translates to: GSSQTLNTFSLLMKPNPEVGHAV*FIQNDD
Trigger: ATCATCATTCTGGATGAAGCAGACAGCATGACCGAC...CTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
3UTR-3UTR TCA 90 bp CAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGGTGGACACTGAATGGGCTCGATaGTCTTATCCGAAGCATTAC +
Preference number: 2 (lower is better)
Translates to: QTLNTFSLLMKPNPEKVDTEWAR*SYPKHY
Trigger: GTAATGCTTCGGATAAGATCATCGAGCCCATTCAGT...GTCCACCTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
3UTR-3UTR TCA 90 bp ATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATACCTCAGGTAGCTCTTaGGTTATGTTCACTGCTGTT +
Preference number: 2 (lower is better)
Translates to: IRSITSKGEASGFRVDFHTSGSS*VMFTAV
Trigger: AACAGCAGTGAACATAACTCAAGAGCTACCTGAGGT...ATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479105.6
3UTR-3UTR GCA 90 bp TCACAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGGTGCACATTTCCTTCCCTTaGAAAGACCTACGGCGAAAA +
Preference number: 2 (lower is better)
Translates to: SQTLNTFSLLMKPNPEKVHISFP*KDLRRK
Trigger: TTTTCGCCGTAGGTCTTTGCAAGGGAAGGAAATGTG...CACCTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479105.6
ENST00000491206.5
3UTR CCA 72 bp GCTTCTCTGCGCCTTTCCGCCCCGTCACCGCATCAATaGGGTGGAGGCCAAACTCAAACACTTGCGGGGCAC +
Preference number: 3 (lower is better)
Translates to: ASLRLSAPSPHQ*GGGQTQTLAGH
Trigger: GTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAGAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
3UTR-3UTR CAA 90 bp CTCTGCGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAATGCAATGGTGTGATCTaGGCTCACTGCAACCTCCAC +
Preference number: 3 (lower is better)
Translates to: LCAFPPRHRINGVEAKLKCNGVI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGATCACACCATTGCA...TTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
3UTR-3UTR CAA 90 bp ACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACGTCCTGCAATGGTGTGATCTaGGCTCACTGCAACCTCCAC +
Preference number: 3 (lower is better)
Translates to: TASMGWRPNSNTCGAQTSCNGVI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGATCACACCATTGCA...GGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
3UTR-3UTR CAA 90 bp CTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTAGAATGCTTGTGGTCTaGCCGGTTCCTGGAGGGCCC +
Preference number: 3 (lower is better)
Translates to: LLDNIHQPGEDLGVGQLCRMLVV*PVPGGP
Trigger: GGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCT...ACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
3UTR GCA 72 bp ACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTaGGGGGCACAGACGTCCCAGAAGCAAACATGCAAG +
Preference number: 3 (lower is better)
Translates to: TASMGWRPNSNT*GAQTSQKQTCK
Trigger: CTTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
3UTR CCA 72 bp GGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTaGAGGGCCCTGGGAATGAGATCTCCAGTAAAGACT +
Preference number: 3 (lower is better)
Translates to: GQAQNACGLAGS*RALGMRSPVKT
Trigger: AGTCTTTACTGGAGATCTCATTCCCAGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
3UTR-3UTR CAA 90 bp TCAAACACTTGCGGGGCACAGACGTCCCAGAAGCAAACATGCAAGTCACGGGAGTGCAATGGTGTGATCTaGGCTCACTGCAACCTCCAC +
Preference number: 3 (lower is better)
Translates to: SNTCGAQTSQKQTCKSRECNGVI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGATCACACCATTGCA...CTCCCGTGACTTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCAAGTGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
3UTR-3UTR CAA 90 bp GGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAATGCTTGTGGTCTaGCCGGTTCCTGGAGGGCCC +
Preference number: 3 (lower is better)
Translates to: GLDDLIRSITSKGEASGFRMLVV*PVPGGP
Trigger: GGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCT...AAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR CAA 90 bp CTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTCCAAGCACAGAATGCTaGTGGTCTTGCCGGTTCCTG +
Preference number: 3 (lower is better)
Translates to: LLDNIHQPGEDLGVGQLCPSTEC*WSCRFL
Trigger: CAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGG...ACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR CAA 90 bp GGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGGTTCTCCTCAAGGCTaGCTGGGCTCCGTCGGTCAT +
Preference number: 3 (lower is better)
Translates to: GSMILSEALQARAKRVVLGSPQG*LGSVGH
Trigger: ATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAACC...TAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR CAA 90 bp GGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTCCAAGCACAGAATGCTaGTGGTCTTGCCGGTTCCTG +
Preference number: 3 (lower is better)
Translates to: GLDDLIRSITSKGEASGFPSTEC*WSCRFL
Trigger: CAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGG...AAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR CAA 90 bp GAAGGACCTCAGGTAGCTCTTGAGTTATGTTCACTGCTGTTTGCATCTCCGTCACCAAGCACAGAATGCTaGTGGTCTTGCCGGTTCCTG +
Preference number: 3 (lower is better)
Translates to: EGPQVALELCSLLFASPSPSTEC*WSCRFL
Trigger: CAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGG...TGACGGAGATGCAAACAGCAGTGAACATAACTCAAGAGCTACCTGAGGTCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479105.6
3UTR-3UTR CAA 90 bp CTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCGGTTCTCCTCAAGGCTaGCTGGGCTCCGTCGGTCAT +
Preference number: 3 (lower is better)
Translates to: LIRSITSKGEASGFRVDFGSPQG*LGSVGH
Trigger: ATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAACC...GAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR CAA 90 bp TTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTGCCCGCAATGATGATGTaGGGCACATTTCCTTCCCTT +
Preference number: 3 (lower is better)
Translates to: FSITFISLVRIWASVSFVPAMMM*GTFPSL
Trigger: AAGGGAAGGAAATGTGCCCAACATCATCATTGCGGG...CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR CAA 90 bp CGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATGGTCCAAGCACAGAATGCTaGTGGTCTTGCCGGTTCCTG +
Preference number: 3 (lower is better)
Translates to: RSITSKGEASGFRVDFHGPSTEC*WSCRFL
Trigger: CAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGG...ACCATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
3UTR TCA 72 bp CTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTaGGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCT +
Preference number: 3 (lower is better)
Translates to: LEHVLTVNEAKS*EGGLQVVQRLP
Trigger: AGGCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
3UTR-3UTR CAA 90 bp CGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATGGTCCCGCAATGATGATGTaGGGCACATTTCCTTCCCTT +
Preference number: 3 (lower is better)
Translates to: RSITSKGEASGFRVDFHGPAMMM*GTFPSL
Trigger: AAGGGAAGGAAATGTGCCCAACATCATCATTGCGGG...ACCATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
3UTR-3UTR CAA 90 bp TCGTCACAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGCCCGCAATGATGATGTaGGGCACATTTCCTTCCCTT +
Preference number: 3 (lower is better)
Translates to: SSQTLNTFSLLMKPNPEKPAMMM*GTFPSL
Trigger: AAGGGAAGGAAATGTGCCCAACATCATCATTGCGGG...CTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTGTGACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479105.6
ENST00000491206.5
3UTR-3UTR CAA 90 bp TCACAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGGTGGCACATTTCCTTCCCTaGCAAAGACCTACGGCGAAA +
Preference number: 3 (lower is better)
Translates to: SQTLNTFSLLMKPNPEKVAHFLP*QRPTAK
Trigger: TTTCGCCGTAGGTCTTTGCAAGGGAAGGAAATGTGC...CACCTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479105.6
ENST00000491206.5
3UTR-3UTR CAA 90 bp TTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAGTGTATCCAATTTCCTaGATAAACTCCAGTTTCAGG +
Preference number: 3 (lower is better)
Translates to: LKDSHVGSSLRRHFPPSEVYPIS*INSSFR
Trigger: CCTGAAACTGGAGTTTATCAAGGAAATTGGATACAC...TTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485545.5
CDS-3UTR TCA 90 bp TCTGCGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACCGAGGCACCGCCCCTTaGCGCCGCCACGCAAGCCCC +
Preference number: 4 (lower is better)
Translates to: SAPFRPVTASMGWRPNSNRGTAP*RRHASP
Trigger: GGGGCTTGCGTGGCGGCGTCAAGGGGCGGTGCCTCG...GTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621097.4
CDS-3UTR CCA 90 bp CAGGGCCCGGGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCCGGCATCTTTGAGTGCTaGGCCCAGCAGGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: QGPGQAQNACGLAGSWRAGIFEC*AQQGPG
Trigger: GCCCGGGCCCTGCTGGGCCCAGCACTCAAAGATGCC...GGCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCGGGCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR TCA 90 bp CAGGGCCCGGGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCCCATTCATCAGCCTGGTaGGGATCTGGGCGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: QGPGQAQNACGLAGSWRAHSSAW*GSGRRS
Trigger: TGACCGACGCCCAGATCCTCACCAGGCTGATGAATG...GGCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCGGGCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR GCA 90 bp TCTGCGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACCGCCCTCAGCTTCTCTaGGCCTTTCCGCCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: SAPFRPVTASMGWRPNSNRPQLL*AFPPRH
Trigger: GTGACGGGGCGGAAAGGCGCAGAGAAGCTGAGGGCG...GTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CCA 90 bp ACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACGTCCGGCATCTTTGAGTGCTaGGCCCAGCAGGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: TASMGWRPNSNTCGAQTSGIFEC*AQQGPG
Trigger: GCCCGGGCCCTGCTGGGCCCAGCACTCAAAGATGCC...GGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000352131.7
CDS-3UTR CCA 90 bp CAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGGGCATCTTTGAGTGCTaGGCCCAGCAGGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: QSCWLQPKAAFSPIRKPRGIFEC*AQQGPG
Trigger: GCCCGGGCCCTGCTGGGCCCAGCACTCAAAGATGCC...CCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000352131.7
CDS-3UTR CCA 90 bp CCGGGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCCCTGGGACTCCTCAAGGCTTGCTaGGCTCCGTCGGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: PGQAQNACGLAGSWRALGLLKAC*APSVML
Trigger: CAGCATGACCGACGGAGCCCAGCAAGCCTTGAGGAG...TCCCAGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
CDS-3UTR GCA 90 bp CCGGGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCCCTGGGACCTGAGAAGGTGGACTaGAGGTTGTTCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: PGQAQNACGLAGSWRALGPEKVD*RLFSAC
Trigger: GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGG...TCCCAGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
CDS-3UTR GCA 90 bp CAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGACGCCCTCAGCTTCTCTaGGCCTTTCCGCCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: QPKAAFSPIRKPRLLYLRRPQLL*AFPPRH
Trigger: GTGACGGGGCGGAAAGGCGCAGAGAAGCTGAGGGCG...TCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CCA 90 bp CCGGGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCCCGCAATGGTCTTGCCGGTTCCTaGAGGGCCCGCAATGATGAT +
Preference number: 4 (lower is better)
Translates to: PGQAQNACGLAGSWRARNGLAGS*RARNDD
Trigger: ATCATCATTGCGGGCCCTCCAGGAACCGGCAAGACC...ATTGCGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CCA 90 bp CCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTGGCATCTTTGAGTGCTaGGCCCAGCAGGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: PEDCTAGLNGLDDLIRSIGIFEC*AQQGPG
Trigger: GCCCGGGCCCTGCTGGGCCCAGCACTCAAAGATGCC...AATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CCA 90 bp CTCAGCTTCTCTGCGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCATTTACCAGCAGTGGGTaGGGCTCGTCACAGACCTTG +
Preference number: 4 (lower is better)
Translates to: LSFSAPFRPVTASMGWRPFTSSG*GSSQTL
Trigger: CAAGGTCTGTGACGAGCCCCACCCACTGCTGGTAAA...TGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAGAGAAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
3UTR CAA 72 bp AGCAGGGCCCGGGCCAAGCACAGAATGCTTGTGGTCTaGCCGGTTCCTGGAGGGCCCGCAATGATGATGTTG +
Preference number: 4 (lower is better)
Translates to: SRARAKHRMLVV*PVPGGPAMMML
Trigger: CAACATCATCATTGCGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCGGGCCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491206.5
ENST00000493156.6
CDS-3UTR TCA 90 bp TTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGCATTCATCAGCCTGGTaGGGATCTGGGCGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: FRPVTASMGWRPNSNTCGHSSAW*GSGRRS
Trigger: TGACCGACGCCCAGATCCTCACCAGGCTGATGAATG...CCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR TCA 90 bp CAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCCTCTGCCCAAGAAGTaGGCGGTTCCTCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QSCWLQPKAAFSPIRKPRPLPKK*AVPLPG
Trigger: TCCTGGCAGAGGAACCGCTCACTTCTTGGGCAGAGG...CCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485545.5
CDS-3UTR GCA 90 bp CCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGAGAATGCTTGTGGTCTTaGCGGTTCCTGGAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: PSPHQWGGGQTQTLAGHRECLWS*RFLEGP
Trigger: CGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTC...TCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000352131.7
CDS-3UTR GCA 90 bp CTGCGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACATGTGTACCGGAGGACTaGACAGCGGGACTGAATGGG +
Preference number: 4 (lower is better)
Translates to: LRLSAPSPHQWGGGQTQTCVPED*TAGLNG
Trigger: CCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA...TGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp CAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAAGGTTGTTCAGCGCCTaGCTCATGTCTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QPKAAFSPIRKPRLLYLRRLFSA*LMSPWA
Trigger: GGCCCAGGGAGACATGAGGCAGGCGCTGAACAACCT...TCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR GCA 90 bp CAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGAGGTTGTTCAGCGCCTaGCTCATGTCTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QSCWLQPKAAFSPIRKPRRLFSA*LMSPWA
Trigger: GGCCCAGGGAGACATGAGGCAGGCGCTGAACAACCT...CCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR GCA 90 bp CTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCCCTGAGAAGGTGGACTaGAGGTTGTTCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: LQPKAAFSPIRKPRLLYLPEKVD*RLFSAC
Trigger: GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGG...GAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CCA 90 bp CGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTCTCCTCAAGGCTTGCTaGGCTCCGTCGGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: RLSAPSPHQWGGGQTQTLLLKAC*APSVML
Trigger: CAGCATGACCGACGGAGCCCAGCAAGCCTTGAGGAG...AAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CCA 90 bp AGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCCTCCTCAAGGCTTGCTaGGCTCCGTCGGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: SHVGSSLRRHFPPSESRGLLKAC*APSVML
Trigger: CAGCATGACCGACGGAGCCCAGCAAGCCTTGAGGAG...GCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CCA 90 bp CTCTGCGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAAAGCCTGGTGAGGATCTaGGCGTCGGTCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LCAFPPRHRINGVEAKLKSLVRI*ASVSFV
Trigger: CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCT...TTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR TCA 90 bp AGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCCATTCATCAGCCTGGTaGGGATCTGGGCGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: SHVGSSLRRHFPPSESRGHSSAW*GSGRRS
Trigger: TGACCGACGCCCAGATCCTCACCAGGCTGATGAATG...GCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR TCA 90 bp CCGGGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCCCGCAATGCACTCCAGCCTGTGTaGCAAAGTGTGACTCCATCA +
Preference number: 4 (lower is better)
Translates to: PGQAQNACGLAGSWRARNALQPV*QSVTPS
Trigger: TGATGGAGTCACACTTTGTCACACAGGCTGGAGTGC...ATTGCGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493156.6
CDS-3UTR GCA 90 bp CTCAGCTTCTCTGCGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCACAAAGACCTCTAGCCTaGTCACGGTGTCTTCATTCC +
Preference number: 4 (lower is better)
Translates to: LSFSAPFRPVTASMGWRPQRPLA*SRCLHS
Trigger: GGAATGAAGACACCGTGAGCAGGCTAGAGGTCTTTG...TGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAGAGAAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp CAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAGTTCTCCTCAAGGCTTaGTGGGCTCCGTCGGTCATG +
Preference number: 4 (lower is better)
Translates to: QPKAAFSPIRKPRLLYLRVLLKA*WAPSVM
Trigger: CATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAAC...TCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp CCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGAGTTCTCCTCAAGGCTTaGTGGGCTCCGTCGGTCATG +
Preference number: 4 (lower is better)
Translates to: PSPHQWGGGQTQTLAGHRVLLKA*WAPSVM
Trigger: CATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAAC...TCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp ACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACGTCCTGTGTACCGGAGGACTaGACAGCGGGACTGAATGGG +
Preference number: 4 (lower is better)
Translates to: TASMGWRPNSNTCGAQTSCVPED*TAGLNG
Trigger: CCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA...GGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp CACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACGTCTGTGTACCGGAGGACTaGACAGCGGGACTGAATGGG +
Preference number: 4 (lower is better)
Translates to: HRINGVEAKLKHLRGTDVCVPED*TAGLNG
Trigger: CCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA...GACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp CAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGACCTGAGAAGGTGGACTaGAGGTTGTTCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: QPKAAFSPIRKPRLLYLRPEKVD*RLFSAC
Trigger: GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGG...TCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR GCA 90 bp TTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATAGGGCACCTGTAAGTAGGCGTGAGCTACCGTaGCTGGCCAGCCACTGGAGT +
Preference number: 4 (lower is better)
Translates to: FPHQKAAAPVPQNRAPVSRRELP*LASHWS
Trigger: ACTCCAGTGGCTGGCCAGGCACGGTAGCTCACGCCT...ACTTACAGGTGCCCTATTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR GCA 90 bp CCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATAAGGCGTGAGCTACCGTaGCTGGCCAGCCACTGGAGT +
Preference number: 4 (lower is better)
Translates to: PKAAFSPIRKPRLLYLRIRRELP*LASHWS
Trigger: ACTCCAGTGGCTGGCCAGGCACGGTAGCTCACGCCT...TATTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR GCA 90 bp TCTGCGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACCCAAACTCAAACACTTaGGGGGCACAGACGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SAPFRPVTASMGWRPNSNPNSNT*GAQTSQ
Trigger: CTGGGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGG...GTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp CAGGGCCCGGGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCCATGTTCACTGCTGTTTaGATCTCCGTCACCTCTGAC +
Preference number: 4 (lower is better)
Translates to: QGPGQAQNACGLAGSWRAMFTAV*ISVTSD
Trigger: GTCAGAGGTGACGGAGATGCAAACAGCAGTGAACAT...GGCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCGGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
CDS-3UTR CCA 90 bp CCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGAGGTCTTGCCGGTTCCTaGAGGGCCCGCAATGATGAT +
Preference number: 4 (lower is better)
Translates to: PSPHQWGGGQTQTLAGHRGLAGS*RARNDD
Trigger: ATCATCATTGCGGGCCCTCCAGGAACCGGCAAGACC...TCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000352131.7
CDS-3UTR CCA 90 bp CGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACAGCCTGGTGAGGATCTaGGCGTCGGTCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: RHRINGVEAKLKHLRGTDSLVRI*ASVSFV
Trigger: CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCT...GTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CCA 90 bp CACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACGTCAGCCTGGTGAGGATCTaGGCGTCGGTCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: HRINGVEAKLKHLRGTDVSLVRI*ASVSFV
Trigger: CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCT...GACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CCA 90 bp CCGGGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCCCTGGGACAAATCCTGAGAAGGTaGACTGCAGGTTGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: PGQAQNACGLAGSWRALGQILRR*TAGCSA
Trigger: CGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTG...TCCCAGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
CDS-3UTR CCA 90 bp CTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCTTTACCAGCAGTGGGTaGGGCTCGTCACAGACCTTG +
Preference number: 4 (lower is better)
Translates to: LQPKAAFSPIRKPRLLYLFTSSG*GSSQTL
Trigger: CAAGGTCTGTGACGAGCCCCACCCACTGCTGGTAAA...GAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CCA 90 bp CTCTGCGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACCGTCACCGCATCAATaGGGTGGAGGCCAAACTCAA +
Preference number: 4 (lower is better)
Translates to: LCAFPPRHRINGVEAKLKPSPHQ*GGGQTQ
Trigger: TTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGG...TTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CCA 90 bp GTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCGGTCTTGCCGGTTCCTaGAGGGCCCTGGGAATGAGA +
Preference number: 4 (lower is better)
Translates to: VPEDCTAGLNGLDDLIRSGLAGS*RALGMR
Trigger: TCTCATTCCCAGGGCCCTCCAGGAACCGGCAAGACC...GCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
CDS-3UTR TCA 90 bp CTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCACTGCACAGCGGGACTaGATGGGCTCGATGATCTTA +
Preference number: 4 (lower is better)
Translates to: LQPKAAFSPIRKPRLLYLTAQRD*MGSMIL
Trigger: TAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGT...GAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp CGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGGGCCAAGCACAGAATaGTTGTGGTCTTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: RLSAPSPHQWGGGQTQTLGPSTE*LWSCRF
Trigger: GAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCC...AAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000352131.7
CDS-3UTR GCA 90 bp CCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGAGGGCCAAGCACAGAATaGTTGTGGTCTTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: PSPHQWGGGQTQTLAGHRGPSTE*LWSCRF
Trigger: GAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCC...TCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000352131.7
CDS-3UTR GCA 90 bp CATCAGAAAGCCGCGGCTCCTGTACCTCAGAATAGGGCACCTGTAAGTCAGTCACATGGCATCTTTGAGTaGTGGGCCCAGCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: HQKAAAPVPQNRAPVSQSHGIFE*WAQQGP
Trigger: CGGGCCCTGCTGGGCCCAGCACTCAAAGATGCCATG...TGACTGACTTACAGGTGCCCTATTCTGAGGTACAGGAGCCGCGGCTTTCTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000352131.7
CDS-3UTR GCA 90 bp GCAGGGCCCGGGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCGTCGGTCATGCTGTCTaGTTCATCCAGAATGATGAT +
Preference number: 4 (lower is better)
Translates to: AGPGPSTECLWSCRFLEGVGHAV*FIQNDD
Trigger: ATCATCATTCTGGATGAAGCAGACAGCATGACCGAC...GCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCGGGCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000491206.5
CDS-3UTR GCA 90 bp GTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCTGTGTACCGGAGGACTaGACAGCGGGACTGAATGGG +
Preference number: 4 (lower is better)
Translates to: VPEDCTAGLNGLDDLIRSCVPED*TAGLNG
Trigger: CCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA...GCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp CCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATAAGGTTGTTCAGCGCCTaGCTCATGTCTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PKAAFSPIRKPRLLYLRIRLFSA*LMSPWA
Trigger: GGCCCAGGGAGACATGAGGCAGGCGCTGAACAACCT...TATTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR GCA 90 bp CCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTAGGTTGTTCAGCGCCTaGCTCATGTCTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PEDCTAGLNGLDDLIRSIRLFSA*LMSPWA
Trigger: GGCCCAGGGAGACATGAGGCAGGCGCTGAACAACCT...AATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp TTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGCCTTGCCAGGAGGCCTaGCATCTGCAAAAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: FRPVTASMGWRPNSNTCGPCQEA*HLQKRV
Trigger: AACTCTCTTTTGCAGATGGCAGGCCTCCTGGCAAGG...CCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp GCAGGGCCCGGGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCCACATTTCCTTCCCTTaGAAAGACCTACGGCGAAAA +
Preference number: 4 (lower is better)
Translates to: AGPGPSTECLWSCRFLEGHISFP*KDLRRK
Trigger: TTTTCGCCGTAGGTCTTTGCAAGGGAAGGAAATGTG...GCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCGGGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479105.6
ENST00000491206.5
CDS-3UTR CCA 90 bp TCAAACACTTGCGGGGCACAGACGTCCCAGAAGCAAACATGCAAGTCACGGGAGCTCCTCAAGGCTTGCTaGGCTCCGTCGGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: SNTCGAQTSQKQTCKSRELLKAC*APSVML
Trigger: CAGCATGACCGACGGAGCCCAGCAAGCCTTGAGGAG...CTCCCGTGACTTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCAAGTGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CCA 90 bp TGTGTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGACTCCTCAAGGCTTGCTaGGCTCCGTCGGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: CVPEDCTAGLNGLDDLIRLLKAC*APSVML
Trigger: CAGCATGACCGACGGAGCCCAGCAAGCCTTGAGGAG...TCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CCA 90 bp GTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCAGCCTGGTGAGGATCTaGGCGTCGGTCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: VPEDCTAGLNGLDDLIRSSLVRI*ASVSFV
Trigger: CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCT...GCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR CCA 90 bp CCGGGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCCCGCAATCAAATCCTGAGAAGGTaGACTGCAGGTTGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: PGQAQNACGLAGSWRARNQILRR*TAGCSA
Trigger: CGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTG...ATTGCGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CCA 90 bp TCTGCGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACAAAGGACAGTCATGTTaGCTCCAGCCTAAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: SAPFRPVTASMGWRPNSNKGQSC*LQPKAA
Trigger: TGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTT...GTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR TCA 90 bp ACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACGTCCACTGCACAGCGGGACTaGATGGGCTCGATGATCTTA +
Preference number: 4 (lower is better)
Translates to: TASMGWRPNSNTCGAQTSTAQRD*MGSMIL
Trigger: TAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGT...GGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR TCA 90 bp TCAAACACTTGCGGGGCACAGACGTCCCAGAAGCAAACATGCAAGTCACGGGAGCATTCATCAGCCTGGTaGGGATCTGGGCGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: SNTCGAQTSQKQTCKSREHSSAW*GSGRRS
Trigger: TGACCGACGCCCAGATCCTCACCAGGCTGATGAATG...CTCCCGTGACTTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCAAGTGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR TCA 90 bp AGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCTCATGTCTCCATTCATCAGCCTGGTaGGGATCTGGGCGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: SQILRRWTAGCSAPASCLHSSAW*GSGRRS
Trigger: TGACCGACGCCCAGATCCTCACCAGGCTGATGAATG...GAGACATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp TCTGCGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACCAAAGACCTCTAGCCTaGTCACGGTGTCTTCATTCC +
Preference number: 4 (lower is better)
Translates to: SAPFRPVTASMGWRPNSNQRPLA*SRCLHS
Trigger: GGAATGAAGACACCGTGAGCAGGCTAGAGGTCTTTG...GTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp TTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATAGGGCACCTGTAAGTGTTCTCCTCAAGGCTTaGTGGGCTCCGTCGGTCATG +
Preference number: 4 (lower is better)
Translates to: FPHQKAAAPVPQNRAPVSVLLKA*WAPSVM
Trigger: CATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAAC...ACTTACAGGTGCCCTATTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp CCTCTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGGTTCTCCTCAAGGCTTaGTGGGCTCCGTCGGTCATG +
Preference number: 4 (lower is better)
Translates to: PLLLDNIHQPGEDLGVGQVLLKA*WAPSVM
Trigger: CATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAAC...CTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp CTCTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCGTTCTCCTCAAGGCTTaGTGGGCTCCGTCGGTCATG +
Preference number: 4 (lower is better)
Translates to: LSFSITFISLVRIWASVSVLLKA*WAPSVM
Trigger: CATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAAC...GCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp CTCTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTGTGTACCGGAGGACTaGACAGCGGGACTGAATGGG +
Preference number: 4 (lower is better)
Translates to: LSFSITFISLVRIWASVSCVPED*TAGLNG
Trigger: CCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA...GCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp CTTTGTGTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCAGGTTGTTCAGCGCCTaGCTCATGTCTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LCVPEDCTAGLNGLDDLIRLFSA*LMSPWA
Trigger: GGCCCAGGGAGACATGAGGCAGGCGCTGAACAACCT...GATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp TTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATAGGGCACCTGTAAGTCCTGAGAAGGTGGACTaGAGGTTGTTCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: FPHQKAAAPVPQNRAPVSPEKVD*RLFSAC
Trigger: GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGG...ACTTACAGGTGCCCTATTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR GCA 90 bp CCTGGAGGGCCCGCAATGATGATGTTGGGCACATTTCCTTCCCTTGCAAAGACCCCTGAGAAGGTGGACTaGAGGTTGTTCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: PGGPAMMMLGTFPSLAKTPEKVD*RLFSAC
Trigger: GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGG...GGTCTTTGCAAGGGAAGGAAATGTGCCCAACATCATCATTGCGGGCCCTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491206.5
ENST00000493156.6
CDS-3UTR GCA 90 bp CACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACGTCCCTTGCCAGGAGGCCTaGCATCTGCAAAAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: HRINGVEAKLKHLRGTDVPCQEA*HLQKRV
Trigger: AACTCTCTTTTGCAGATGGCAGGCCTCCTGGCAAGG...GACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp CAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGACCTTGCCAGGAGGCCTaGCATCTGCAAAAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: QPKAAFSPIRKPRLLYLRPCQEA*HLQKRV
Trigger: AACTCTCTTTTGCAGATGGCAGGCCTCCTGGCAAGG...TCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR GCA 90 bp CAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCCTTGCCAGGAGGCCTaGCATCTGCAAAAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: QSCWLQPKAAFSPIRKPRPCQEA*HLQKRV
Trigger: AACTCTCTTTTGCAGATGGCAGGCCTCCTGGCAAGG...CCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR GCA 90 bp AGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCACGCCCTCAGCTTCTCTaGGCCTTTCCGCCCCGTCAC +
Preference number: 4 (lower is better)
Translates to: SLKDSHVGSSLRRHFPPSRPQLL*AFPPRH
Trigger: GTGACGGGGCGGAAAGGCGCAGAGAAGCTGAGGGCG...TGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp GCAGGGCCCGGGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCAAACCGGTTAAAACTTaGTTCTGGATGACTCTAGCC +
Preference number: 4 (lower is better)
Translates to: AGPGPSTECLWSCRFLEGKPVKT*FWMTLA
Trigger: GGCTAGAGTCATCCAGAAGCAAGTTTTAACCGGTTT...GCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCGGGCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479105.6
ENST00000491206.5
CDS-3UTR CCA 90 bp CAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCCCGCAATGATGATGGTCTTGCCGGTTCCTaGAGGGCCCGCAATGATGAT +
Preference number: 4 (lower is better)
Translates to: QAQNACGLAGSWRARNDDGLAGS*RARNDD
Trigger: ATCATCATTGCGGGCCCTCCAGGAACCGGCAAGACC...ATCATCATTGCGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CCA 90 bp CAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAAGCACAGAATGCTTGTaGTCTTGCCGGTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: QPKAAFSPIRKPRLLYLRSTECL*SCRFLE
Trigger: CTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCT...TCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000352131.7
CDS-3UTR CCA 90 bp TTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCTCCTCCTCAAGGCTTGCTaGGCTCCGTCGGTCATGCGC +
Preference number: 4 (lower is better)
Translates to: LMKPNPEKVDCRLFSACLLLKAC*APSVMR
Trigger: GCGCATGACCGACGGAGCCCAGCAAGCCTTGAGGAG...GAGGCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494019.5
CDS-3UTR TCA 90 bp AAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCTCATGTCTCATTCATCAGCCTGGTaGGGATCTGGGCGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: KPNPEKVDCRLFSACLMSHSSAW*GSGRRS
Trigger: TGACCGACGCCCAGATCCTCACCAGGCTGATGAATG...AGACATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp AAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGGAATGCTTGTGGTCTTaGCGGTTCCTGGAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: KGQSCWLQPKAAFSPIRKECLWS*RFLEGP
Trigger: CGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTC...CTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000352131.7
CDS-3UTR GCA 90 bp CTGTTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCGAATGCTTGTGGTCTTaGCGGTTCCTGGAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: LLMKPNPEKVDCRLFSACECLWS*RFLEGP
Trigger: CGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTC...GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491206.5
ENST00000493156.6
CDS-3UTR GCA 90 bp TGCGGGGCACAGACGTCCCAGAAGCAAACATGCAAGTCACGGGAGTTTATTTATCATGGCATCTTTGAGTaGTGGGCCCAGCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: CGAQTSQKQTCKSREFIYHGIFE*WAQQGP
Trigger: CGGGCCCTGCTGGGCCCAGCACTCAAAGATGCCATG...ATAAATAAACTCCCGTGACTTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000352131.7
CDS-3UTR GCA 90 bp TCAAACACTTGCGGGGCACAGACGTCCCAGAAGCAAACATGCAAGTCACGGGAGGGGCTCCGTCGGTCATaGTGTCTGCTTCATCCAGAA +
Preference number: 4 (lower is better)
Translates to: SNTCGAQTSQKQTCKSREGLRRS*CLLHPE
Trigger: TTCTGGATGAAGCAGACAGCATGACCGACGGAGCCC...CTCCCGTGACTTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCAAGTGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000621097.4
CDS-3UTR GCA 90 bp CTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTGTACCGGAGGACTaGACAGCGGGACTGAATGGG +
Preference number: 4 (lower is better)
Translates to: LLLDNIHQPGEDLGVGQLCVPED*TAGLNG
Trigger: CCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA...AAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp CTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTAGGTTGTTCAGCGCCTaGCTCATGTCTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LLDNIHQPGEDLGVGQLCRLFSA*LMSPWA
Trigger: GGCCCAGGGAGACATGAGGCAGGCGCTGAACAACCT...ACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp CTTTGTGTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCCTGAGAAGGTGGACTaGAGGTTGTTCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: LCVPEDCTAGLNGLDDLIPEKVD*RLFSAC
Trigger: GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGG...GATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp CAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAAGGAGGCCTGCCATCTaGAAAAGAGAGTTCACTCCT +
Preference number: 4 (lower is better)
Translates to: QPKAAFSPIRKPRLLYLRRRPAI*KREFTP
Trigger: AGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTCCT...TCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR GCA 90 bp CGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACAGGAGGCCTGCCATCTaGAAAAGAGAGTTCACTCCT +
Preference number: 4 (lower is better)
Translates to: RHRINGVEAKLKHLRGTDRRPAI*KREFTP
Trigger: AGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTCCT...GTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp AGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAAGGCGTGAGCTACCGTaGCTGGCCAGCCACTGGAGT +
Preference number: 4 (lower is better)
Translates to: SLKDSHVGSSLRRHFPPSRRELP*LASHWS
Trigger: ACTCCAGTGGCTGGCCAGGCACGGTAGCTCACGCCT...TGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR GCA 90 bp GACCCCGCAATGATGATGTTGGGCACATTTCCTTCCCTTGCAAAGACCTACGGCGAATGCTTGTGGTCTTaGCGGTTCCTGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: DPAMMMLGTFPSLAKTYGECLWS*RFLEGP
Trigger: AGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTC...GCCGTAGGTCTTTGCAAGGGAAGGAAATGTGCCCAACATCATCATTGCGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479105.6
CDS-3UTR CCA 90 bp CTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTCTCCTCAAGGCTTGCTaGGCTCCGTCGGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: LLDNIHQPGEDLGVGQLCLLKAC*APSVML
Trigger: CAGCATGACCGACGGAGCCCAGCAAGCCTTGAGGAG...ACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CCA 90 bp CAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCAAATCCTGAGAAGGTaGACTGCAGGTTGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: QSCWLQPKAAFSPIRKPRQILRR*TAGCSA
Trigger: CGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTG...CCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CCA 90 bp CCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATATTTACCAGCAGTGGGTaGGGCTCGTCACAGACCTTG +
Preference number: 4 (lower is better)
Translates to: PKAAFSPIRKPRLLYLRIFTSSG*GSSQTL
Trigger: CAAGGTCTGTGACGAGCCCCACCCACTGCTGGTAAA...TATTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CCA 90 bp CCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTTTTACCAGCAGTGGGTaGGGCTCGTCACAGACCTTG +
Preference number: 4 (lower is better)
Translates to: PEDCTAGLNGLDDLIRSIFTSSG*GSSQTL
Trigger: CAAGGTCTGTGACGAGCCCCACCCACTGCTGGTAAA...AATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR CCA 90 bp ACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACGTCCTGCCTGGCCAGCCACTaGAGTTTAAAGGACAGTCAT +
Preference number: 4 (lower is better)
Translates to: TASMGWRPNSNTCGAQTSCLASH*SLKDSH
Trigger: ATGACTGTCCTTTAAACTCCAGTGGCTGGCCAGGCA...GGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CCA 90 bp CGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACACCGCATCAATGGGGTaGAGGCCAAACTCAAACACT +
Preference number: 4 (lower is better)
Translates to: RHRINGVEAKLKHLRGTDTASMG*RPNSNT
Trigger: AGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGT...GTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CCA 90 bp CACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACGTCACCGCATCAATGGGGTaGAGGCCAAACTCAAACACT +
Preference number: 4 (lower is better)
Translates to: HRINGVEAKLKHLRGTDVTASMG*RPNSNT
Trigger: AGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGT...GACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CCA 90 bp CCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGAACCGCATCAATGGGGTaGAGGCCAAACTCAAACACT +
Preference number: 4 (lower is better)
Translates to: PSPHQWGGGQTQTLAGHRTASMG*RPNSNT
Trigger: AGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGT...TCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CCA 90 bp CCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATACCGTCACCGCATCAATaGGGTGGAGGCCAAACTCAA +
Preference number: 4 (lower is better)
Translates to: PKAAFSPIRKPRLLYLRIPSPHQ*GGGQTQ
Trigger: TTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGG...TATTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
3UTR CAA 72 bp CACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTaGCGGGGCACAGACGTCCCAGAAGCAAACATGCAA +
Preference number: 4 (lower is better)
Translates to: HRINGVEAKLKH*RGTDVPEANMQ
Trigger: TTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR TCA 90 bp CTCTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCACTGCACAGCGGGACTaGATGGGCTCGATGATCTTA +
Preference number: 4 (lower is better)
Translates to: LSFSITFISLVRIWASVSTAQRD*MGSMIL
Trigger: TAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGT...GCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR TCA 90 bp TTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTGCATTCATCAGCCTGGTaGGGATCTGGGCGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: FSITFISLVRIWASVSFVHSSAW*GSGRRS
Trigger: TGACCGACGCCCAGATCCTCACCAGGCTGATGAATG...CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR TCA 90 bp ACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCCATTCATCAGCCTGGTaGGGATCTGGGCGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: TAGLNGLDDLIRSITSKGHSSAW*GSGRRS
Trigger: TGACCGACGCCCAGATCCTCACCAGGCTGATGAATG...GCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR TCA 90 bp CCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGAAATGAAGCCAAATCCTaGGAAGGTGGACTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PSPHQWGGGQTQTLAGHRNEAKS*EGGLQV
Trigger: AACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATT...TCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR TCA 90 bp CCGGGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCCCGCAATGGTCATGCTGTCATTTaGAGCATTGAGTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: PGQAQNACGLAGSWRARNGHAVI*SIEFQH
Trigger: ATGTTGGAACTCAATGCTTCAAATGACAGCATGACC...ATTGCGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493156.6
CDS-3UTR GCA 90 bp GAAGGACCTCAGGTAGCTCTTGAGTTATGTTCACTGCTGTTTGCATCTCCGTCACATGGCATCTTTGAGTaGTGGGCCCAGCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: EGPQVALELCSLLFASPSHGIFE*WAQQGP
Trigger: CGGGCCCTGCTGGGCCCAGCACTCAAAGATGCCATG...TGACGGAGATGCAAACAGCAGTGAACATAACTCAAGAGCTACCTGAGGTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479105.6
CDS-3UTR GCA 90 bp TTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGTCGGTCATGCTGTCTaGTTCATCCAGAATGATGAT +
Preference number: 4 (lower is better)
Translates to: FRPVTASMGWRPNSNTCGVGHAV*FIQNDD
Trigger: ATCATCATTCTGGATGAAGCAGACAGCATGACCGAC...CCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000621097.4
CDS-3UTR GCA 90 bp TCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTTCTCCTCAAGGCTTaGTGGGCTCCGTCGGTCATG +
Preference number: 4 (lower is better)
Translates to: SFSITFISLVRIWASVSFVLLKA*WAPSVM
Trigger: CATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAAC...AAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp TTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCTCTGTGTACCGGAGGACTaGACAGCGGGACTGAATGGG +
Preference number: 4 (lower is better)
Translates to: LMKPNPEKVDCRLFSACLCVPED*TAGLNG
Trigger: CCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA...GAGGCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp AGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAAGGTTGTTCAGCGCCTaGCTCATGTCTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SLKDSHVGSSLRRHFPPSRLFSA*LMSPWA
Trigger: GGCCCAGGGAGACATGAGGCAGGCGCTGAACAACCT...TGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR GCA 90 bp AATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTAGGTTGTTCAGCGCCTaGCTCATGTCTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NGLDDLIRSITSKGEASGRLFSA*LMSPWA
Trigger: GGCCCAGGGAGACATGAGGCAGGCGCTGAACAACCT...ACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp CTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTAGGTTGTTCAGCGCCTaGCTCATGTCTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LNGLDDLIRSITSKGEASRLFSA*LMSPWA
Trigger: GGCCCAGGGAGACATGAGGCAGGCGCTGAACAACCT...ACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp ACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCCCTGAGAAGGTGGACTaGAGGTTGTTCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: TAGLNGLDDLIRSITSKGPEKVD*RLFSAC
Trigger: GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGG...GCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp TTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCTCGAATGCTTGTGGTCTTaGCGGTTCCTGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: LMKPNPEKVDCRLFSACLECLWS*RFLEGP
Trigger: AGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTC...GAGGCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
CDS-3UTR CCA 90 bp ATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATGGTTCTCCTGGCATCTTTGAGTGCTaGGCCCAGCAGGGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: ITSKGEASGFRVDFHGSPGIFEC*AQQGPG
Trigger: GCCCGGGCCCTGCTGGGCCCAGCACTCAAAGATGCC...AGGAGAACCATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CCA 90 bp AGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATGGTTCTCCTCAAGGCCTCCTCAAGGCTTGCTaGGCTCCGTCGGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: SKGEASGFRVDFHGSPQGLLKAC*APSVML
Trigger: CAGCATGACCGACGGAGCCCAGCAAGCCTTGAGGAG...GCCTTGAGGAGAACCATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CCA 90 bp AATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTCTCCTCAAGGCTTGCTaGGCTCCGTCGGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: NGLDDLIRSITSKGEASGLLKAC*APSVML
Trigger: CAGCATGACCGACGGAGCCCAGCAAGCCTTGAGGAG...ACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CCA 90 bp TTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTGAGCCTGGTGAGGATCTaGGCGTCGGTCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: FSITFISLVRIWASVSFVSLVRI*ASVSFV
Trigger: CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCT...CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR CCA 90 bp CCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGAAGGCTTCGTCAATGTTaGCATTCACACAGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PSPHQWGGGQTQTLAGHRRLRQC*HSHSAG
Trigger: TCCAGCACTGTGTGAATGCCAACATTGACGAAGCCT...TCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CCA 90 bp AGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCAGGCTTCGTCAATGTTaGCATTCACACAGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SHVGSSLRRHFPPSESRGRLRQC*HSHSAG
Trigger: TCCAGCACTGTGTGAATGCCAACATTGACGAAGCCT...GCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CCA 90 bp AGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATGCCTGGCCAGCCACTaGAGTTTAAAGGACAGTCAT +
Preference number: 4 (lower is better)
Translates to: SLRRHFPPSESRGSCTSECLASH*SLKDSH
Trigger: ATGACTGTCCTTTAAACTCCAGTGGCTGGCCAGGCA...TTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CCA 90 bp AATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTGGTCTTGCCGGTTCCTaGAGGGCCCTGGGAATGAGA +
Preference number: 4 (lower is better)
Translates to: NGLDDLIRSITSKGEASGGLAGS*RALGMR
Trigger: TCTCATTCCCAGGGCCCTCCAGGAACCGGCAAGACC...ACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
3UTR CAA 72 bp TGCATCTCCGTCACCTCTGACCCCGCAATGATGATGTaGGGCACATTTCCTTCCCTTGCAAAGACCTACGGC +
Preference number: 4 (lower is better)
Translates to: CISVTSDPAMMM*GTFPSLAKTYG
Trigger: GCCGTAGGTCTTTGCAAGGGAAGGAAATGTGCCCAACATCATCATTGCGGGGTCAGAGGTGACGGAGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479105.6
CDS-3UTR TCA 90 bp CACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACGTCACTGAATGGGCTCGATaGTCTTATCCGAAGCATTAC +
Preference number: 4 (lower is better)
Translates to: HRINGVEAKLKHLRGTDVTEWAR*SYPKHY
Trigger: GTAATGCTTCGGATAAGATCATCGAGCCCATTCAGT...GACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR TCA 90 bp CTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTACTGCACAGCGGGACTaGATGGGCTCGATGATCTTA +
Preference number: 4 (lower is better)
Translates to: LLLDNIHQPGEDLGVGQLTAQRD*MGSMIL
Trigger: TAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGT...AAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR TCA 90 bp GGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTCATTCATCAGCCTGGTaGGGATCTGGGCGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: GLDDLIRSITSKGEASGFHSSAW*GSGRRS
Trigger: TGACCGACGCCCAGATCCTCACCAGGCTGATGAATG...AAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR TCA 90 bp GGAGGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGCATTCATCAGCCTGGTaGGGATCTGGGCGTCGGTCA +
Preference number: 4 (lower is better)
Translates to: GGLPSAKESSLLPLFSCEHSSAW*GSGRRS
Trigger: TGACCGACGCCCAGATCCTCACCAGGCTGATGAATG...CTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497430.1
CDS-3UTR TCA 90 bp GGTCAGCTTTGTGTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATAATGAAGCCAAATCCTaGGAAGGTGGACTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GQLCVPEDCTAGLNGLDDNEAKS*EGGLQV
Trigger: AACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATT...ATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACAAAGCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR TCA 90 bp CCTCTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGAGGCTGAGGCAGAATTaGTTGAACCAGGGAGATGCA +
Preference number: 4 (lower is better)
Translates to: PLLLDNIHQPGEDLGVGQRLRQN*LNQGDA
Trigger: TGCATCTCCCTGGTTCAATCAATTCTGCCTCAGCCT...CTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493156.6
CDS-3UTR GCA 90 bp CCTCTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCAAAGACCTCTAGCCTaGTCACGGTGTCTTCATTCC +
Preference number: 4 (lower is better)
Translates to: PLLLDNIHQPGEDLGVGQQRPLA*SRCLHS
Trigger: GGAATGAAGACACCGTGAGCAGGCTAGAGGTCTTTG...CTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000480432.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp CTGTTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCGGGCCAAGCACAGAATaGTTGTGGTCTTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: LLMKPNPEKVDCRLFSACGPSTE*LWSCRF
Trigger: GAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCC...GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR GCA 90 bp TTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTGGGGCCAAGCACAGAATaGTTGTGGTCTTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: FSITFISLVRIWASVSFVGPSTE*LWSCRF
Trigger: GAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCC...CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR GCA 90 bp CTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTGGGCCAAGCACAGAATaGTTGTGGTCTTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: LLDNIHQPGEDLGVGQLCGPSTE*LWSCRF
Trigger: GAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCC...ACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR GCA 90 bp CGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATGGTCATGGCATCTTTGAGTaGTGGGCCCAGCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: RSITSKGEASGFRVDFHGHGIFE*WAQQGP
Trigger: CGGGCCCTGCTGGGCCCAGCACTCAAAGATGCCATG...ACCATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR GCA 90 bp CTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTGGGCTCCGTCGGTCATaGTGTCTGCTTCATCCAGAA +
Preference number: 4 (lower is better)
Translates to: LLDNIHQPGEDLGVGQLCGLRRS*CLLHPE
Trigger: TTCTGGATGAAGCAGACAGCATGACCGACGGAGCCC...ACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
CDS-3UTR GCA 90 bp CTGTTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCGGGCTCCGTCGGTCATaGTGTCTGCTTCATCCAGAA +
Preference number: 4 (lower is better)
Translates to: LLMKPNPEKVDCRLFSACGLRRS*CLLHPE
Trigger: TTCTGGATGAAGCAGACAGCATGACCGACGGAGCCC...GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
CDS-3UTR GCA 90 bp GCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGGGCTCCGTCGGTCATaGTGTCTGCTTCATCCAGAA +
Preference number: 4 (lower is better)
Translates to: AGLNGLDDLIRSITSKGEGLRRS*CLLHPE
Trigger: TTCTGGATGAAGCAGACAGCATGACCGACGGAGCCC...TTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
CDS-3UTR GCA 90 bp GAGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCGGGCTCCGTCGGTCATaGTGTCTGCTTCATCCAGAA +
Preference number: 4 (lower is better)
Translates to: EFKGQSCWLQPKAAFSPIGLRRS*CLLHPE
Trigger: TTCTGGATGAAGCAGACAGCATGACCGACGGAGCCC...GATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000621097.4
CDS-3UTR GCA 90 bp GGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTGTTCTCCTCAAGGCTTaGTGGGCTCCGTCGGTCATG +
Preference number: 4 (lower is better)
Translates to: GLDDLIRSITSKGEASGFVLLKA*WAPSVM
Trigger: CATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAAC...AAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR GCA 90 bp GGAGGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGGTTCTCCTCAAGGCTTaGTGGGCTCCGTCGGTCATG +
Preference number: 4 (lower is better)
Translates to: GGLPSAKESSLLPLFSCEVLLKA*WAPSVM
Trigger: CATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAAC...CTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497430.1
CDS-3UTR GCA 90 bp CTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTTGTGTACCGGAGGACTaGACAGCGGGACTGAATGGG +
Preference number: 4 (lower is better)
Translates to: LNGLDDLIRSITSKGEASCVPED*TAGLNG
Trigger: CCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA...ACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp GGCTCGTCACAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAGGTTGTTCAGCGCCTaGCTCATGTCTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GSSQTLNTFSLLMKPNPERLFSA*LMSPWA
Trigger: GGCCCAGGGAGACATGAGGCAGGCGCTGAACAACCT...CTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR GCA 90 bp GAGGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGTAGGTTGTTCAGCGCCTaGCTCATGTCTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: EACHLQKRVHSFRYFHVSRLFSA*LMSPWA
Trigger: GGCCCAGGGAGACATGAGGCAGGCGCTGAACAACCT...ACTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485545.5
ENST00000497430.1
CDS-3UTR GCA 90 bp GGAGGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGCCTGAGAAGGTGGACTaGAGGTTGTTCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GGLPSAKESSLLPLFSCEPEKVD*RLFSAC
Trigger: GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGG...CTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485545.5
ENST00000497430.1
CDS-3UTR GCA 90 bp CTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCTCCCAGAAGCAAACATaGAAGTCACGGGAGTTTATT +
Preference number: 4 (lower is better)
Translates to: LQPKAAFSPIRKPRLLYLSQKQT*KSREFI
Trigger: AATAAACTCCCGTGACTTGCATGTTTGCTTCTGGGA...GAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp AAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCAAACTCAAACACTTaGGGGGCACAGACGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KGQSCWLQPKAAFSPIRKPNSNT*GAQTSQ
Trigger: CTGGGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGG...CTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp GAGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCCCAAACTCAAACACTTaGGGGGCACAGACGTCCCAG +
Preference number: 4 (lower is better)
Translates to: EFKGQSCWLQPKAAFSPIPNSNT*GAQTSQ
Trigger: CTGGGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGG...GATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp AGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCTCATGTCTCTGGATGACTCTAGCCTaGTCACGGTGTCTTCATTCC +
Preference number: 4 (lower is better)
Translates to: SQILRRWTAGCSAPASCLWMTLA*SRCLHS
Trigger: GGAATGAAGACACCGTGAGCAGGCTAGAGTCATCCA...GAGACATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479105.6
ENST00000491206.5
CDS-3UTR CCA 90 bp TTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAGGTCTTGCCGGTTCCTaGAGGGCCCGCAATGATGAT +
Preference number: 4 (lower is better)
Translates to: LKDSHVGSSLRRHFPPSEGLAGS*RARNDD
Trigger: ATCATCATTGCGGGCCCTCCAGGAACCGGCAAGACC...TTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000352131.7
CDS-3UTR CCA 90 bp AATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTAGCCTGGTGAGGATCTaGGCGTCGGTCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: NGLDDLIRSITSKGEASGSLVRI*ASVSFV
Trigger: CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCT...ACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR CCA 90 bp AGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATGGTTCTCCTCAAGGCAGCCTGGTGAGGATCTaGGCGTCGGTCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SKGEASGFRVDFHGSPQGSLVRI*ASVSFV
Trigger: CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCT...GCCTTGAGGAGAACCATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CCA 90 bp TTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATAGGGCACCTGTAAGTCAAATCCTGAGAAGGTaGACTGCAGGTTGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: FPHQKAAAPVPQNRAPVSQILRR*TAGCSA
Trigger: CGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTG...ACTTACAGGTGCCCTATTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CCA 90 bp CTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTTTTACCAGCAGTGGGTaGGGCTCGTCACAGACCTTG +
Preference number: 4 (lower is better)
Translates to: LLDNIHQPGEDLGVGQLCFTSSG*GSSQTL
Trigger: CAAGGTCTGTGACGAGCCCCACCCACTGCTGGTAAA...ACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR CCA 90 bp GGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGGTCTTGCCGGTTCCTaGAGGGCCCTGGGAATGAGA +
Preference number: 4 (lower is better)
Translates to: GSMILSEALQARAKRVVLGLAGS*RALGMR
Trigger: TCTCATTCCCAGGGCCCTCCAGGAACCGGCAAGACC...TAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
CDS-3UTR TCA 90 bp TTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCTCACTGCACAGCGGGACTaGATGGGCTCGATGATCTTA +
Preference number: 4 (lower is better)
Translates to: LMKPNPEKVDCRLFSACLTAQRD*MGSMIL
Trigger: TAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGT...GAGGCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR TCA 90 bp TTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTGACTGCACAGCGGGACTaGATGGGCTCGATGATCTTA +
Preference number: 4 (lower is better)
Translates to: FSITFISLVRIWASVSFVTAQRD*MGSMIL
Trigger: TAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGT...CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR TCA 90 bp CCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTAATGAAGCCAAATCCTaGGAAGGTGGACTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PEDCTAGLNGLDDLIRSINEAKS*EGGLQV
Trigger: AACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATT...AATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR TCA 90 bp CCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATAAATGAAGCCAAATCCTaGGAAGGTGGACTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PKAAFSPIRKPRLLYLRINEAKS*EGGLQV
Trigger: AACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATT...TATTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR TCA 90 bp TGTGTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAATGAAGCCAAATCCTaGGAAGGTGGACTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: CVPEDCTAGLNGLDDLIRNEAKS*EGGLQV
Trigger: AACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATT...TCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR TCA 90 bp CCTCTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGAATGAAGCCAAATCCTaGGAAGGTGGACTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: PLLLDNIHQPGEDLGVGQNEAKS*EGGLQV
Trigger: AACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATT...CTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR TCA 90 bp TCTGCGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACTCCGCTATTTTCATGTaGGTGTATCCAATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SAPFRPVTASMGWRPNSNSAIFM*VYPISL
Trigger: CAAGGAAATTGGATACACTCACATGAAAATAGCGGA...GTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR TCA 90 bp CTGTTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCTGTGTGACAAAGTGTaGCTCCATCACGGCAGTTCG +
Preference number: 4 (lower is better)
Translates to: LLMKPNPEKVDCRLFSACLCDKV*LHHGSS
Trigger: CGAACTGCCGTGATGGAGTCACACTTTGTCACACAG...GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493156.6
CDS-3UTR GCA 90 bp GATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTACATGGCATCTTTGAGTaGTGGGCCCAGCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: DDLIRSITSKGEASGFRVHGIFE*WAQQGP
Trigger: CGGGCCCTGCTGGGCCCAGCACTCAAAGATGCCATG...TACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR GCA 90 bp ATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATCATGGCATCTTTGAGTaGTGGGCCCAGCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: IRSITSKGEASGFRVDFHHGIFE*WAQQGP
Trigger: CGGGCCCTGCTGGGCCCAGCACTCAAAGATGCCATG...ATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR GCA 90 bp GGCTCGTCACAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGGTTCTCCTCAAGGCTTaGTGGGCTCCGTCGGTCATG +
Preference number: 4 (lower is better)
Translates to: GSSQTLNTFSLLMKPNPEVLLKA*WAPSVM
Trigger: CATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAAC...CTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR GCA 90 bp GGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTATGTGTACCGGAGGACTaGACAGCGGGACTGAATGGG +
Preference number: 4 (lower is better)
Translates to: GSMILSEALQARAKRVVLCVPED*TAGLNG
Trigger: CCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA...TAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR GCA 90 bp GGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGTGTTGTGTACCGGAGGACTaGACAGCGGGACTGAATGGG +
Preference number: 4 (lower is better)
Translates to: GLPSAKESSLLPLFSCECCVPED*TAGLNG
Trigger: CCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA...ACACTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497430.1
CDS-3UTR GCA 90 bp CGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATGGTAGGTTGTTCAGCGCCTaGCTCATGTCTCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RSITSKGEASGFRVDFHGRLFSA*LMSPWA
Trigger: GGCCCAGGGAGACATGAGGCAGGCGCTGAACAACCT...ACCATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR GCA 90 bp CCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGATCCCAGAAGCAAACATaGAAGTCACGGGAGTTTATT +
Preference number: 4 (lower is better)
Translates to: PSPHQWGGGQTQTLAGHRSQKQT*KSREFI
Trigger: AATAAACTCCCGTGACTTGCATGTTTGCTTCTGGGA...TCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp GGAGGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGGAATGCTGGTGGGAATaGACGTGCTGCAGCCACTTC +
Preference number: 4 (lower is better)
Translates to: GGLPSAKESSLLPLFSCEECWWE*TCCSHF
Trigger: GAAGTGGCTGCAGCACGTGCATTCCCACCAGCATTC...CTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497430.1
CDS-3UTR CCA 90 bp GGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAAGCCTGGTGAGGATCTaGGCGTCGGTCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: GSMILSEALQARAKRVVLSLVRI*ASVSFV
Trigger: CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCT...TAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CCA 90 bp GAGGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGTAGCCTGGTGAGGATCTaGGCGTCGGTCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: EACHLQKRVHSFRYFHVSSLVRI*ASVSFV
Trigger: CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCT...ACTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497430.1
CDS-3UTR CCA 90 bp CTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTCAAATCCTGAGAAGGTaGACTGCAGGTTGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: LLLDNIHQPGEDLGVGQLQILRR*TAGCSA
Trigger: CGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTG...AAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR CCA 90 bp AGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCATTTACCAGCAGTGGGTaGGGCTCGTCACAGACCTTG +
Preference number: 4 (lower is better)
Translates to: SLKDSHVGSSLRRHFPPSFTSSG*GSSQTL
Trigger: CAAGGTCTGTGACGAGCCCCACCCACTGCTGGTAAA...TGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CCA 90 bp AATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTACCAGCAGTGGGTaGGGCTCGTCACAGACCTTG +
Preference number: 4 (lower is better)
Translates to: NGLDDLIRSITSKGEASGFTSSG*GSSQTL
Trigger: CAAGGTCTGTGACGAGCCCCACCCACTGCTGGTAAA...ACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR CCA 90 bp AGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCTCATGTCTCAGGCTTCGTCAATGTTaGCATTCACACAGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SQILRRWTAGCSAPASCLRLRQC*HSHSAG
Trigger: TCCAGCACTGTGTGAATGCCAACATTGACGAAGCCT...GAGACATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000494019.5
CDS-3UTR TCA 90 bp TGCGGGGCACAGACGTCCCAGAAGCAAACATGCAAGTCACGGGAGTTTATTTATACTGCACAGCGGGACTaGATGGGCTCGATGATCTTA +
Preference number: 4 (lower is better)
Translates to: CGAQTSQKQTCKSREFIYTAQRD*MGSMIL
Trigger: TAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGT...ATAAATAAACTCCCGTGACTTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR TCA 90 bp AATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTACTGCACAGCGGGACTaGATGGGCTCGATGATCTTA +
Preference number: 4 (lower is better)
Translates to: NGLDDLIRSITSKGEASGTAQRD*MGSMIL
Trigger: TAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGT...ACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR TCA 90 bp GGCCAAACTCAAACACTTGCGGGGCACAGACGTCCCAGAAGCAAACATGCAAGTAATGAAGCCAAATCCTaGGAAGGTGGACTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GQTQTLAGHRRPRSKHASNEAKS*EGGLQV
Trigger: AACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATT...ACTTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR TCA 90 bp GACCCCGCAATGATGATGTTGGGCACATTTCCTTCCCTTGCAAAGACCTACGGCAATGAAGCCAAATCCTaGGAAGGTGGACTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: DPAMMMLGTFPSLAKTYGNEAKS*EGGLQV
Trigger: AACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATT...GCCGTAGGTCTTTGCAAGGGAAGGAAATGTGCCCAACATCATCATTGCGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479105.6
CDS-3UTR TCA 90 bp CAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGATCCGCTATTTTCATGTaGGTGTATCCAATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: QPKAAFSPIRKPRLLYLRSAIFM*VYPISL
Trigger: CAAGGAAATTGGATACACTCACATGAAAATAGCGGA...TCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR TCA 90 bp CCTCTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGACCTCAGGTAGCTCTTaGGTTATGTTCACTGCTGTT +
Preference number: 4 (lower is better)
Translates to: PLLLDNIHQPGEDLGVGQTSGSS*VMFTAV
Trigger: AACAGCAGTGAACATAACTCAAGAGCTACCTGAGGT...CTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
CDS-3UTR TCA 90 bp CTCTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCACCTCAGGTAGCTCTTaGGTTATGTTCACTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LSFSITFISLVRIWASVSTSGSS*VMFTAV
Trigger: AACAGCAGTGAACATAACTCAAGAGCTACCTGAGGT...GCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
CDS-3UTR TCA 90 bp GAGGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGTATGTGGTGGCTAGGTTaGGGATCCTCCGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: EACHLQKRVHSFRYFHVSMWWLG*GSSGML
Trigger: CAGCATTCCGGAGGATCCTCAACCTAGCCACCACAT...ACTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497430.1
CDS-3UTR GCA 90 bp GCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAACAAAGACCTCTAGCCTaGTCACGGTGTCTTCATTCC +
Preference number: 4 (lower is better)
Translates to: AGLNGLDDLIRSITSKGEQRPLA*SRCLHS
Trigger: GGAATGAAGACACCGTGAGCAGGCTAGAGGTCTTTG...TTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000480432.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR GCA 90 bp CTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCGAATGCTTGTGGTCTTaGCGGTTCCTGGAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: LIRSITSKGEASGFRVDFECLWS*RFLEGP
Trigger: CGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTC...GAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000491206.5
ENST00000493156.6
CDS-3UTR GCA 90 bp CCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTGTCGGTCATGCTGTCTaGTTCATCCAGAATGATGAT +
Preference number: 4 (lower is better)
Translates to: PEDCTAGLNGLDDLIRSIVGHAV*FIQNDD
Trigger: ATCATCATTCTGGATGAAGCAGACAGCATGACCGAC...AATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
CDS-3UTR GCA 90 bp ACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGGTGGACTGCTGTGTACCGGAGGACTaGACAGCGGGACTGAATGGG +
Preference number: 4 (lower is better)
Translates to: TLNTFSLLMKPNPEKVDCCVPED*TAGLNG
Trigger: CCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA...GCAGTCCACCTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR GCA 90 bp CAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGGTGGACCCTGAGAAGGTGGACTaGAGGTTGTTCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: QTLNTFSLLMKPNPEKVDPEKVD*RLFSAC
Trigger: GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGG...GTCCACCTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR GCA 90 bp CTTTGTGTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCATGTTCACTGCTGTTTaGATCTCCGTCACCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LCVPEDCTAGLNGLDDLIMFTAV*ISVTSD
Trigger: GTCAGAGGTGACGGAGATGCAAACAGCAGTGAACAT...GATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
CDS-3UTR GCA 90 bp ACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGGTGGACTGCGAATGCTTGTGGTCTTaGCGGTTCCTGGAGGGCCCT +
Preference number: 4 (lower is better)
Translates to: TLNTFSLLMKPNPEKVDCECLWS*RFLEGP
Trigger: AGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTC...GCAGTCCACCTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470266.5
ENST00000479105.6
CDS-3UTR GCA 90 bp ACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGGTGGACTGCGGGCTCCGTCGGTCATaGGCAATGATGATGTTGGGC +
Preference number: 4 (lower is better)
Translates to: TLNTFSLLMKPNPEKVDCGLRRS*AMMMLG
Trigger: GCCCAACATCATCATTGCGCATGACCGACGGAGCCC...GCAGTCCACCTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494019.5
CDS-3UTR CCA 90 bp CTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCTCCTCAAGGCTTGCTaGGCTCCGTCGGTCATGCTG +
Preference number: 4 (lower is better)
Translates to: LIRSITSKGEASGFRVDFLLKAC*APSVML
Trigger: CAGCATGACCGACGGAGCCCAGCAAGCCTTGAGGAG...GAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CCA 90 bp AACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGAGCCTGGTGAGGATCTaGGCGTCGGTCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: NTFSLLMKPNPEKVDCRLSLVRI*ASVSFV
Trigger: CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCT...CAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR CCA 90 bp GAGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCCAAATCCTGAGAAGGTaGACTGCAGGTTGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: EFKGQSCWLQPKAAFSPIQILRR*TAGCSA
Trigger: CGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTG...GATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CCA 90 bp ACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCCAAATCCTGAGAAGGTaGACTGCAGGTTGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: TAGLNGLDDLIRSITSKGQILRR*TAGCSA
Trigger: CGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTG...GCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR CCA 90 bp GGCTCGTCACAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGTTTACCAGCAGTGGGTaGGGCTCGTCACAGACCTTG +
Preference number: 4 (lower is better)
Translates to: GSSQTLNTFSLLMKPNPEFTSSG*GSSQTL
Trigger: CAAGGTCTGTGACGAGCCCCACCCACTGCTGGTAAA...CTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR CCA 90 bp AAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGTGCCTGGCCAGCCACTaGAGTTTAAAGGACAGTCAT +
Preference number: 4 (lower is better)
Translates to: KGQSCWLQPKAAFSPIRKCLASH*SLKDSH
Trigger: ATGACTGTCCTTTAAACTCCAGTGGCTGGCCAGGCA...CTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CCA 90 bp GAGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCTGCCTGGCCAGCCACTaGAGTTTAAAGGACAGTCAT +
Preference number: 4 (lower is better)
Translates to: EFKGQSCWLQPKAAFSPICLASH*SLKDSH
Trigger: ATGACTGTCCTTTAAACTCCAGTGGCTGGCCAGGCA...GATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR TCA 90 bp GAGGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGTACTGCACAGCGGGACTaGATGGGCTCGATGATCTTA +
Preference number: 4 (lower is better)
Translates to: EACHLQKRVHSFRYFHVSTAQRD*MGSMIL
Trigger: TAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGT...ACTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497430.1
CDS-3UTR TCA 90 bp CTGTTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCAATGAAGCCAAATCCTaGGAAGGTGGACTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LLMKPNPEKVDCRLFSACNEAKS*EGGLQV
Trigger: AACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATT...GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR TCA 90 bp CCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATAGGTCATGCTGTCATTTaGAGCATTGAGTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: PKAAFSPIRKPRLLYLRIGHAVI*SIEFQH
Trigger: ATGTTGGAACTCAATGCTTCAAATGACAGCATGACC...TATTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000352131.7
CDS-3UTR TCA 90 bp CTCTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCGGTCATGCTGTCATTTaGAGCATTGAGTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: LSFSITFISLVRIWASVSGHAVI*SIEFQH
Trigger: ATGTTGGAACTCAATGCTTCAAATGACAGCATGACC...GCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470266.5
ENST00000493156.6
CDS-3UTR TCA 90 bp GGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGTGTCCCAGATGCCACAAGTaGGCAAGAATCAGAAGGGCT +
Preference number: 4 (lower is better)
Translates to: GLPSAKESSLLPLFSCECPRCHK*ARIRRA
Trigger: AGCCCTTCTGATTCTTGCTCACTTGTGGCATCTGGG...ACACTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485545.5
CDS-3UTR GCA 90 bp AGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATGGTTCTCCTCAAGGCCAAAGACCTCTAGCCTaGTCACGGTGTCTTCATTCC +
Preference number: 4 (lower is better)
Translates to: SKGEASGFRVDFHGSPQGQRPLA*SRCLHS
Trigger: GGAATGAAGACACCGTGAGCAGGCTAGAGGTCTTTG...GCCTTGAGGAGAACCATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000480432.5
ENST00000493156.6
CDS-3UTR GCA 90 bp TCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGGGGCCAAGCACAGAATaGTTGTGGTCTTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: SMILSEALQARAKRVVLEGPSTE*LWSCRF
Trigger: GAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCC...CTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR GCA 90 bp CATCAGAAAGCCGCGGCTCCTGTACCTCAGAATAGGGCACCTGTAAGTCAGTCATCCTCACAACGTCAATaGCCCTGTCATTTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: HQKAAAPVPQNRAPVSQSSSQRQ*PCHLKH
Trigger: ATGCTTCAAATGACAGGGGCATTGACGTTGTGAGGA...TGACTGACTTACAGGTGCCCTATTCTGAGGTACAGGAGCCGCGGCTTTCTGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000055077.8
CDS-3UTR GCA 90 bp ACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGGTGGACTGCGGGCTCCGTCGGTCATaGTGTCTGCTTCATCCAGAA +
Preference number: 4 (lower is better)
Translates to: TLNTFSLLMKPNPEKVDCGLRRS*CLLHPE
Trigger: TTCTGGATGAAGCAGACAGCATGACCGACGGAGCCC...GCAGTCCACCTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
CDS-3UTR GCA 90 bp GATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGTTCTCCTCAAGGCTTaGTGGGCTCCGTCGGTCATG +
Preference number: 4 (lower is better)
Translates to: DDLIRSITSKGEASGFRVVLLKA*WAPSVM
Trigger: CATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAAC...TACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR GCA 90 bp ATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATGGTTCTCCTCCTGAGAAGGTGGACTaGAGGTTGTTCAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: ITSKGEASGFRVDFHGSPPEKVD*RLFSAC
Trigger: GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGG...AGGAGAACCATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR GCA 90 bp TGCGGGGCACAGACGTCCCAGAAGCAAACATGCAAGTCACGGGAGTTTATTTATAGGAGGCCTGCCATCTaGAAAAGAGAGTTCACTCCT +
Preference number: 4 (lower is better)
Translates to: CGAQTSQKQTCKSREFIYRRPAI*KREFTP
Trigger: AGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTCCT...ATAAATAAACTCCCGTGACTTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp GGAGGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGAGGAGGCCTGCCATCTaGAAAAGAGAGTTCACTCCT +
Preference number: 4 (lower is better)
Translates to: GGLPSAKESSLLPLFSCERRPAI*KREFTP
Trigger: AGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTCCT...CTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485545.5
ENST00000497430.1
CDS-3UTR GCA 90 bp GAGGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGTCCTTGCCAGGAGGCCTaGCATCTGCAAAAGAGAGTT +
Preference number: 4 (lower is better)
Translates to: EACHLQKRVHSFRYFHVSPCQEA*HLQKRV
Trigger: AACTCTCTTTTGCAGATGGCAGGCCTCCTGGCAAGG...ACTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000485545.5
ENST00000497430.1
CDS-3UTR GCA 90 bp TCAAACACTTGCGGGGCACAGACGTCCCAGAAGCAAACATGCAAGTCACGGGAGTCCCAGAAGCAAACATaGAAGTCACGGGAGTTTATT +
Preference number: 4 (lower is better)
Translates to: SNTCGAQTSQKQTCKSRESQKQT*KSREFI
Trigger: AATAAACTCCCGTGACTTGCATGTTTGCTTCTGGGA...CTCCCGTGACTTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCAAGTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR GCA 90 bp CTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTTGGATGACTCTAGCCTaGTCACGGTGTCTTCATTCC +
Preference number: 4 (lower is better)
Translates to: LNGLDDLIRSITSKGEASWMTLA*SRCLHS
Trigger: GGAATGAAGACACCGTGAGCAGGCTAGAGTCATCCA...ACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479105.6
ENST00000491206.5
CDS-3UTR GCA 90 bp CCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTAAACCGGTTAAAACTTaGTTCTGGATGACTCTAGCC +
Preference number: 4 (lower is better)
Translates to: PEDCTAGLNGLDDLIRSIKPVKT*FWMTLA
Trigger: GGCTAGAGTCATCCAGAAGCAAGTTTTAACCGGTTT...AATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479105.6
ENST00000491206.5
CDS-3UTR GCA 90 bp CTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTCACATTTCCTTCCCTTaGAAAGACCTACGGCGAAAA +
Preference number: 4 (lower is better)
Translates to: LLLDNIHQPGEDLGVGQLHISFP*KDLRRK
Trigger: TTTTCGCCGTAGGTCTTTGCAAGGGAAGGAAATGTG...AAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479105.6
ENST00000491206.5
CDS-3UTR CCA 90 bp ATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATAGCCTGGTGAGGATCTaGGCGTCGGTCAGCTTTGTG +
Preference number: 4 (lower is better)
Translates to: IRSITSKGEASGFRVDFHSLVRI*ASVSFV
Trigger: CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCT...ATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CCA 90 bp ATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTCAAATCCTGAGAAGGTaGACTGCAGGTTGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: MGSMILSEALQARAKRVVQILRR*TAGCSA
Trigger: CGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTG...AACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR CCA 90 bp AGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCACAAATCCTGAGAAGGTaGACTGCAGGTTGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: SLKDSHVGSSLRRHFPPSQILRR*TAGCSA
Trigger: CGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTG...TGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CCA 90 bp GCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGTGTATTTACCAGCAGTGGGTaGGGCTCGTCACAGACCTTG +
Preference number: 4 (lower is better)
Translates to: ACHLQKRVHSFRYFHVSVFTSSG*GSSQTL
Trigger: CAAGGTCTGTGACGAGCCCCACCCACTGCTGGTAAA...TACACTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485545.5
ENST00000497430.1
CDS-3UTR CCA 90 bp TCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTAGGCTTCGTCAATGTTaGCATTCACACAGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SFSITFISLVRIWASVSFRLRQC*HSHSAG
Trigger: TCCAGCACTGTGTGAATGCCAACATTGACGAAGCCT...AAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000494019.5
CDS-3UTR TCA 90 bp GACCCCGCAATGATGATGTTGGGCACATTTCCTTCCCTTGCAAAGACCTACGGCAATGCCCCTGTCATTTaGAGCATTGAGTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: DPAMMMLGTFPSLAKTYGNAPVI*SIEFQH
Trigger: ATGTTGGAACTCAATGCTTCAAATGACAGGGGCATT...GCCGTAGGTCTTTGCAAGGGAAGGAAATGTGCCCAACATCATCATTGCGGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479105.6
CDS-3UTR TCA 90 bp CAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGGTGGACACTGCACAGCGGGACTaGATGGGCTCGATGATCTTA +
Preference number: 4 (lower is better)
Translates to: QTLNTFSLLMKPNPEKVDTAQRD*MGSMIL
Trigger: TAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGT...GTCCACCTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR TCA 90 bp TTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAATGAAGCCAAATCCTaGGAAGGTGGACTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LKDSHVGSSLRRHFPPSENEAKS*EGGLQV
Trigger: AACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATT...TTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR TCA 90 bp GGAGGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGAATGAAGCCAAATCCTaGGAAGGTGGACTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GGLPSAKESSLLPLFSCENEAKS*EGGLQV
Trigger: AACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATT...CTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485545.5
ENST00000497430.1
CDS-3UTR GCA 90 bp GATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGGGCCAAGCACAGAATaGTTGTGGTCTTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: DDLIRSITSKGEASGFRVGPSTE*LWSCRF
Trigger: GAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCC...TACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR GCA 90 bp CTGTTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCTCCTCACAACGTCAATaGCCCTGTCATTTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: LLMKPNPEKVDCRLFSACSSQRQ*PCHLKH
Trigger: ATGCTTCAAATGACAGGGGCATTGACGTTGTGAGGA...GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000491206.5
CDS-3UTR GCA 90 bp GCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAATCCTCACAACGTCAATaGCCCTGTCATTTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: AGLNGLDDLIRSITSKGESSQRQ*PCHLKH
Trigger: ATGCTTCAAATGACAGGGGCATTGACGTTGTGAGGA...TTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000491206.5
CDS-3UTR GCA 90 bp ACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGTCGGTCATGCTGTCTaGTTCATCCAGAATGATGAT +
Preference number: 4 (lower is better)
Translates to: TAGLNGLDDLIRSITSKGVGHAV*FIQNDD
Trigger: ATCATCATTCTGGATGAAGCAGACAGCATGACCGAC...GCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
CDS-3UTR GCA 90 bp AGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATGGTTCTCCTCAAGGCATGTTCACTGCTGTTTaGATCTCCGTCACCTCTGAC +
Preference number: 4 (lower is better)
Translates to: SKGEASGFRVDFHGSPQGMFTAV*ISVTSD
Trigger: GTCAGAGGTGACGGAGATGCAAACAGCAGTGAACAT...GCCTTGAGGAGAACCATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
CDS-3UTR CCA 90 bp GAGGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGTCAAATCCTGAGAAGGTaGACTGCAGGTTGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: EACHLQKRVHSFRYFHVSQILRR*TAGCSA
Trigger: CGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTG...ACTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485545.5
ENST00000497430.1
CDS-3UTR CCA 90 bp ATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATGGTTCTCCTTTTACCAGCAGTGGGTaGGGCTCGTCACAGACCTTG +
Preference number: 4 (lower is better)
Translates to: ITSKGEASGFRVDFHGSPFTSSG*GSSQTL
Trigger: CAAGGTCTGTGACGAGCCCCACCCACTGCTGGTAAA...AGGAGAACCATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
CDS-3UTR CCA 90 bp AATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTAGGCTTCGTCAATGTTaGCATTCACACAGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: NGLDDLIRSITSKGEASGRLRQC*HSHSAG
Trigger: TCCAGCACTGTGTGAATGCCAACATTGACGAAGCCT...ACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000494019.5
CDS-3UTR TCA 90 bp GAGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAATGCCCCTGTCATTTaGAGCATTGAGTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: EFKGQSCWLQPKAAFSPINAPVI*SIEFQH
Trigger: ATGTTGGAACTCAATGCTTCAAATGACAGGGGCATT...GATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000055077.8
CDS-3UTR TCA 90 bp TCACAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGGTGACTGCACAGCGGGACTaGATGGGCTCGATGATCTTA +
Preference number: 4 (lower is better)
Translates to: SQTLNTFSLLMKPNPEKVTAQRD*MGSMIL
Trigger: TAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGT...CACCTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR TCA 90 bp GGCTCGTCACAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAATGAAGCCAAATCCTaGGAAGGTGGACTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: GSSQTLNTFSLLMKPNPENEAKS*EGGLQV
Trigger: AACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATT...CTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR GCA 90 bp AGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGTCGGTCATGCTGTCTaGTTCATCCAGAATGATGAT +
Preference number: 4 (lower is better)
Translates to: SLKDSHVGSSLRRHFPPSVGHAV*FIQNDD
Trigger: ATCATCATTCTGGATGAAGCAGACAGCATGACCGAC...TGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000621097.4
CDS-3UTR GCA 90 bp ACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCTTGAGTTATGTTCACTaGTGTTTGCATCTCCGTCAC +
Preference number: 4 (lower is better)
Translates to: TAGLNGLDDLIRSITSKGLSYVH*CLHLRH
Trigger: GTGACGGAGATGCAAACAGCAGTGAACATAACTCAA...GCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
CDS-3UTR GCA 90 bp CTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTTTGAGTTATGTTCACTaGTGTTTGCATCTCCGTCAC +
Preference number: 4 (lower is better)
Translates to: LLDNIHQPGEDLGVGQLCLSYVH*CLHLRH
Trigger: GTGACGGAGATGCAAACAGCAGTGAACATAACTCAA...ACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
CDS-3UTR GCA 90 bp TCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGCAGAAATCACACCACTaGACTCCAGCCTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: SMILSEALQARAKRVVLEQKSHH*TPACVT
Trigger: TGTCACACAGGCTGGAGTGCAGTGGTGTGATTTCTG...CTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493156.6
CDS-3UTR CCA 90 bp CAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGGTGGACCAAATCCTGAGAAGGTaGACTGCAGGTTGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: QTLNTFSLLMKPNPEKVDQILRR*TAGCSA
Trigger: CGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTG...GTCCACCTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR CCA 90 bp GGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGTGTAGGCTTCGTCAATGTTaGCATTCACACAGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GLPSAKESSLLPLFSCECRLRQC*HSHSAG
Trigger: TCCAGCACTGTGTGAATGCCAACATTGACGAAGCCT...ACACTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485545.5
ENST00000497430.1
CDS-3UTR CCA 90 bp GGCACAGACGTCCCAGAAGCAAACATGCAAGTCACGGGAGTTTATTTATTTAATCCGTCACCGCATCAATaGGGTGGAGGCCAAACTCAA +
Preference number: 4 (lower is better)
Translates to: GTDVPEANMQVTGVYLFNPSPHQ*GGGQTQ
Trigger: TTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGG...ATTAAATAAATAAACTCCCGTGACTTGCATGTTTGCTTCTGGGACGTCTGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR TCA 90 bp ATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTAATGCCCCTGTCATTTaGAGCATTGAGTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: MGSMILSEALQARAKRVVNAPVI*SIEFQH
Trigger: ATGTTGGAACTCAATGCTTCAAATGACAGGGGCATT...AACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000491206.5
CDS-3UTR TCA 90 bp GAGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCTCCGCTATTTTCATGTaGGTGTATCCAATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: EFKGQSCWLQPKAAFSPISAIFM*VYPISL
Trigger: CAAGGAAATTGGATACACTCACATGAAAATAGCGGA...GATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR TCA 90 bp GCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGACCTACGGCGAAAATaGTCATTAAAACCGGTTAAA +
Preference number: 4 (lower is better)
Translates to: AGLNGLDDLIRSITSKGEDLRRK*SLKPVK
Trigger: TTTAACCGGTTTTAATGATCATTTTCGCCGTAGGTC...TTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479105.6
ENST00000491206.5
CDS-3UTR GCA 90 bp GGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTATCCTCACAACGTCAATaGCCCTGTCATTTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: GSMILSEALQARAKRVVLSSQRQ*PCHLKH
Trigger: ATGCTTCAAATGACAGGGGCATTGACGTTGTGAGGA...TAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000491206.5
CDS-3UTR CCA 90 bp TCGTCACAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGCAAATCCTGAGAAGGTaGACTGCAGGTTGTTCAGCG +
Preference number: 4 (lower is better)
Translates to: SSQTLNTFSLLMKPNPEKQILRR*TAGCSA
Trigger: CGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTG...CTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTGTGACGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR CCA 90 bp GTATCCAATTTCCTATTAGAATGGCTTAAAAACCAAACTGAGCACTCCATGTGGGATCCTCCGGAATGCTaGTGGGAATGCACGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VSNFLLEWLKNQTEHSMWDPPEC*WECTCC
Trigger: GCAGCACGTGCATTCCCACCAGCATTCCGGAGGATC...CCACATGGAGTGCTCAGTTTGGTTTTTAAGCCATTCTAATAGGAAATTGGATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497430.1
CDS-3UTR TCA 90 bp TGCGGGGCACAGACGTCCCAGAAGCAAACATGCAAGTCACGGGAGTTTATTTATTCCGCTATTTTCATGTaGGTGTATCCAATTTCCTTG +
Preference number: 4 (lower is better)
Translates to: CGAQTSQKQTCKSREFIYSAIFM*VYPISL
Trigger: CAAGGAAATTGGATACACTCACATGAAAATAGCGGA...ATAAATAAACTCCCGTGACTTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR TCA 90 bp TCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGACCTCAGGTAGCTCTTaGGTTATGTTCACTGCTGTT +
Preference number: 4 (lower is better)
Translates to: SMILSEALQARAKRVVLETSGSS*VMFTAV
Trigger: AACAGCAGTGAACATAACTCAAGAGCTACCTGAGGT...CTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
CDS-3UTR CCA 90 bp ATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATGGTTCTCCTAGGCTTCGTCAATGTTaGCATTCACACAGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ITSKGEASGFRVDFHGSPRLRQC*HSHSAG
Trigger: TCCAGCACTGTGTGAATGCCAACATTGACGAAGCCT...AGGAGAACCATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
CDS-3UTR GCA 90 bp CTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCGTCGGTCATGCTGTCTaGTTCATCCAGAATGATGAT +
Preference number: 4 (lower is better)
Translates to: LIRSITSKGEASGFRVDFVGHAV*FIQNDD
Trigger: ATCATCATTCTGGATGAAGCAGACAGCATGACCGAC...GAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
CDS-3UTR GCA 90 bp AACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTGAGTTATGTTCACTaGTGTTTGCATCTCCGTCAC +
Preference number: 4 (lower is better)
Translates to: NTFSLLMKPNPEKVDCRLLSYVH*CLHLRH
Trigger: GTGACGGAGATGCAAACAGCAGTGAACATAACTCAA...CAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470266.5
ENST00000479105.6
CDS-3UTR CCA 90 bp GGCACAGACGTCCCAGAAGCAAACATGCAAGTCACGGGAGTTTATTTATTTAATAGGCTTCGTCAATGTTaGCATTCACACAGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GTDVPEANMQVTGVYLFNRLRQC*HSHSAG
Trigger: TCCAGCACTGTGTGAATGCCAACATTGACGAAGCCT...ATTAAATAAATAAACTCCCGTGACTTGCATGTTTGCTTCTGGGACGTCTGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CCA 90 bp CAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGGTGGACGTTAAAACTTGCTTCTaGATGACTCTAGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: QTLNTFSLLMKPNPEKVDVKTCF*MTLACS
Trigger: TGAGCAGGCTAGAGTCATCCAGAAGCAAGTTTTAAC...GTCCACCTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479105.6
ENST00000491206.5
CDS-3UTR CCA 90 bp AACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGGTTAAAACTTGCTTCTaGATGACTCTAGCCTGCTCA +
Preference number: 4 (lower is better)
Translates to: NTFSLLMKPNPEKVDCRLVKTCF*MTLACS
Trigger: TGAGCAGGCTAGAGTCATCCAGAAGCAAGTTTTAAC...CAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479105.6
ENST00000491206.5
CDS-3UTR TCA 90 bp GATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAAATGCCCCTGTCATTTaGAGCATTGAGTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: DDLIRSITSKGEASGFRVNAPVI*SIEFQH
Trigger: ATGTTGGAACTCAATGCTTCAAATGACAGGGGCATT...TACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000491206.5
CDS-3UTR TCA 90 bp GGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGTGTTCCGCTATTTTCATGTaGGTGTATCCAATTTCCTAT +
Preference number: 4 (lower is better)
Translates to: GLPSAKESSLLPLFSCECSAIFM*VYPISY
Trigger: ATAGGAAATTGGATACACTCACATGAAAATAGCGGA...ACACTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000497430.1
CDS-3UTR TCA 90 bp ATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATGGTTCTCCTGACCTACGGCGAAAATaGTCATTAAAACCGGTTAAA +
Preference number: 4 (lower is better)
Translates to: ITSKGEASGFRVDFHGSPDLRRK*SLKPVK
Trigger: TTTAACCGGTTTTAATGATCATTTTCGCCGTAGGTC...AGGAGAACCATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000479105.6
ENST00000491206.5
CDS-3UTR CCA 90 bp GTATCCAATTTCCTATTAGAATGGCTTAAAAACCAAACTGAGCACTCCATGTGGAGGCTTCGTCAATGTTaGCATTCACACAGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: VSNFLLEWLKNQTEHSMWRLRQC*HSHSAG
Trigger: TCCAGCACTGTGTGAATGCCAACATTGACGAAGCCT...CCACATGGAGTGCTCAGTTTGGTTTTTAAGCCATTCTAATAGGAAATTGGATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497430.1
CDS-3UTR CAA 90 bp CAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAGCGCTGCCGGGGGCCTaGCTGAAGGCAGGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: QPKAAFSPIRKPRLLYLRALPGA*LKAGAG
Trigger: CCCTGCCCCTGCCTTCAGCAAGGCCCCCGGCAGCGC...TCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp CCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACCGAGGCACCGCCCCTaGACGCCGCCACGCAAGCCC +
Preference number: 5 (lower is better)
Translates to: PSPHQWGGGQTQTLAGHRPRHRP*TPPRKP
Trigger: GGGCTTGCGTGGCGGCGTCAAGGGGCGGTGCCTCGG...TCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000621097.4
CDS-3UTR CAA 90 bp GTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCGCGCTGCCGGGGGCCTaGCTGAAGGCAGGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: VPEDCTAGLNGLDDLIRSALPGA*LKAGAG
Trigger: CCCTGCCCCTGCCTTCAGCAAGGCCCCCGGCAGCGC...GCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000480432.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR CAA 90 bp TCAAACACTTGCGGGGCACAGACGTCCCAGAAGCAAACATGCAAGTCACGGGAGGCGCTGCCGGGGGCCTaGCTGAAGGCAGGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: SNTCGAQTSQKQTCKSREALPGA*LKAGAG
Trigger: CCCTGCCCCTGCCTTCAGCAAGGCCCCCGGCAGCGC...CTCCCGTGACTTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCAAGTGTTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp CTCAGCTTCTCTGCGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAGGTTCTCCTCAAGGCTaGCTGGGCTCCGTCGGTCAT +
Preference number: 5 (lower is better)
Translates to: LSFSAPFRPVTASMGWRPGSPQG*LGSVGH
Trigger: ATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAACC...TGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAGAGAAGCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp GCAGGGCCCGGGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCAAGGTGGACTGCAGGTaGTTCAGCGCCTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: AGPGPSTECLWSCRFLEGKVDCR*FSACLM
Trigger: CATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTT...GCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCGGGCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CAA 90 bp CGGGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCCCTGGGAAGGTTCTCCTCAAGGCTaGCTGGGCTCCGTCGGTCAT +
Preference number: 5 (lower is better)
Translates to: RAKHRMLVVLPVPGGPWEGSPQG*LGSVGH
Trigger: ATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAACC...TTCCCAGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
CDS-3UTR CAA 90 bp CTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGCGCTGCCGGGGGCCTaGCTGAAGGCAGGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LNGLDDLIRSITSKGEASALPGA*LKAGAG
Trigger: CCCTGCCCCTGCCTTCAGCAAGGCCCCCGGCAGCGC...ACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000479105.6
ENST00000480432.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR CAA 90 bp CTCTGCGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAAAGAATGCTTGTGGTCTaGCCGGTTCCTGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: LCAFPPRHRINGVEAKLKRMLVV*PVPGGP
Trigger: GGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCT...TTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000352131.7
CDS-3UTR CAA 90 bp CTCAGCTTCTCTGCGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCACCAAGCACAGAATGCTaGTGGTCTTGCCGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: LSFSAPFRPVTASMGWRPPSTEC*WSCRFL
Trigger: CAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGG...TGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAGAGAAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000352131.7
CDS-3UTR CAA 90 bp CTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCGGTTCTCCTCAAGGCTaGCTGGGCTCCGTCGGTCAT +
Preference number: 5 (lower is better)
Translates to: LQPKAAFSPIRKPRLLYLGSPQG*LGSVGH
Trigger: ATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAACC...GAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp CAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAGGTTCTCCTCAAGGCTaGCTGGGCTCCGTCGGTCAT +
Preference number: 5 (lower is better)
Translates to: QPKAAFSPIRKPRLLYLRGSPQG*LGSVGH
Trigger: ATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAACC...TCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp CTGCGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACAGCCAAACTCAAACACTaGCGGGGCACAGACGTCCCA +
Preference number: 5 (lower is better)
Translates to: LRLSAPSPHQWGGGQTQTAKLKH*RGTDVP
Trigger: TGGGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGC...TGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp CAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGGTGGACGCGCTGCCGGGGGCCTaGCTGAAGGCAGGGGCAGGG +
Preference number: 5 (lower is better)
Translates to: QTLNTFSLLMKPNPEKVDALPGA*LKAGAG
Trigger: CCCTGCCCCTGCCTTCAGCAAGGCCCCCGGCAGCGC...GTCCACCTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000479105.6
ENST00000480432.5
ENST00000494019.5
CDS-3UTR CAA 90 bp CTCAGCTTCTCTGCGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCACCCGCAATGATGATGTaGGGCACATTTCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: LSFSAPFRPVTASMGWRPPAMMM*GTFPSL
Trigger: AAGGGAAGGAAATGTGCCCAACATCATCATTGCGGG...TGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAGAGAAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp CCGGGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCCCTGGGACCCGCAATGATGATGTaGGGCACATTTCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: PGQAQNACGLAGSWRALGPAMMM*GTFPSL
Trigger: AAGGGAAGGAAATGTGCCCAACATCATCATTGCGGG...TCCCAGGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
CDS-3UTR CAA 90 bp GTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCGGTTCTCCTCAAGGCTaGCTGGGCTCCGTCGGTCAT +
Preference number: 5 (lower is better)
Translates to: VPEDCTAGLNGLDDLIRSGSPQG*LGSVGH
Trigger: ATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAACC...GCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR CAA 90 bp CAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGAAGGTGGACTGCAGGTaGTTCAGCGCCTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: QSCWLQPKAAFSPIRKPRKVDCR*FSACLM
Trigger: CATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTT...CCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CAA 90 bp AGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCTTCTGACACAGCCTaGCCAGGAGGCCTGCCATCT +
Preference number: 5 (lower is better)
Translates to: SHVGSSLRRHFPPSESRGSSDTA*PGGLPS
Trigger: AGATGGCAGGCCTCCTGGCAAGGCTGTGTCAGAAGA...GCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CAA 90 bp CTCTGCGCCTTTCCGCCCCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAAGCACATTTCCTTCCCTaGCAAAGACCTCTAGCCTGC +
Preference number: 5 (lower is better)
Translates to: LCAFPPRHRINGVEAKLKAHFLP*QRPLAC
Trigger: GCAGGCTAGAGGTCTTTGCAAGGGAAGGAAATGTGC...TTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGGGGCGGAAAGGCGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp CCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATAAGAATGCTTGTGGTCTaGCCGGTTCCTGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: PKAAFSPIRKPRLLYLRIRMLVV*PVPGGP
Trigger: GGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCT...TATTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000352131.7
CDS-3UTR CAA 90 bp CTCTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCAGAATGCTTGTGGTCTaGCCGGTTCCTGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: LSFSITFISLVRIWASVSRMLVV*PVPGGP
Trigger: GGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCT...GCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CAA 90 bp CAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCCAAGCACAGAATGCTaGTGGTCTTGCCGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: QSCWLQPKAAFSPIRKPRPSTEC*WSCRFL
Trigger: CAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGG...CCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000055077.8
ENST00000352131.7
CDS-3UTR CAA 90 bp GCCGGTTCCTGGAGGGCCCGCAATGATGATGTTGGGCACATTTCCTTCCCTTGCCCAAGCACAGAATGCTaGTGGTCTTGCCGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: AGSWRARNDDVGHISFPCPSTEC*WSCRFL
Trigger: CAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGG...GCAAGGGAAGGAAATGTGCCCAACATCATCATTGCGGGCCCTCCAGGAACCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CAA 90 bp GTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCAAGGTGGACTGCAGGTaGTTCAGCGCCTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: VPEDCTAGLNGLDDLIRSKVDCR*FSACLM
Trigger: CATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTT...GCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR CAA 90 bp AAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCTCATGTCTGGTTCTCCTCAAGGCTaGCTGGGCTCCGTCGGTCAT +
Preference number: 5 (lower is better)
Translates to: KPNPEKVDCRLFSACLMSGSPQG*LGSVGH
Trigger: ATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAACC...AGACATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR CAA 90 bp CCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATAAAGGTGGACTGCAGGTaGTTCAGCGCCTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: PKAAFSPIRKPRLLYLRIKVDCR*FSACLM
Trigger: CATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTT...TATTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CAA 90 bp CCTGGAGGGCCCGCAATGATGATGTTGGGCACATTTCCTTCCCTTGCAAAGACCAAGGTGGACTGCAGGTaGTTCAGCGCCTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: PGGPAMMMLGTFPSLAKTKVDCR*FSACLM
Trigger: CATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTT...GGTCTTTGCAAGGGAAGGAAATGTGCCCAACATCATCATTGCGGGCCCTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CAA 90 bp TTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATAGGGCACCTGTAAGTAAGGTGGACTGCAGGTaGTTCAGCGCCTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: FPHQKAAAPVPQNRAPVSKVDCR*FSACLM
Trigger: CATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTT...ACTTACAGGTGCCCTATTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CAA 90 bp CAGGGCCCGGGCCAAGCACAGAATGCTTGTGGTCTTGCCGGTTCCTGGAGGGCCCACACTCGAAAGATGTaGCCAATGATATCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: QGPGQAQNACGLAGSWRAHTRKM*PMISSG
Trigger: ACCAGAAGATATCATTGGCAACATCTTTCGAGTGTG...GGCCCTCCAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGGCCCGGGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470266.5
CDS-3UTR CAA 90 bp TTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATAGGGCACCTGTAAGTTCTTCTGACACAGCCTaGCCAGGAGGCCTGCCATCT +
Preference number: 5 (lower is better)
Translates to: FPHQKAAAPVPQNRAPVSSSDTA*PGGLPS
Trigger: AGATGGCAGGCCTCCTGGCAAGGCTGTGTCAGAAGA...ACTTACAGGTGCCCTATTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CAA 90 bp CCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATATCTTCTGACACAGCCTaGCCAGGAGGCCTGCCATCT +
Preference number: 5 (lower is better)
Translates to: PKAAFSPIRKPRLLYLRISSDTA*PGGLPS
Trigger: AGATGGCAGGCCTCCTGGCAAGGCTGTGTCAGAAGA...TATTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CAA 90 bp TTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATAGGGCACCTGTAAGTGCCAAACTCAAACACTaGCGGGGCACAGACGTCCCA +
Preference number: 5 (lower is better)
Translates to: FPHQKAAAPVPQNRAPVSAKLKH*RGTDVP
Trigger: TGGGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGC...ACTTACAGGTGCCCTATTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp CCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATAGCCAAACTCAAACACTaGCGGGGCACAGACGTCCCA +
Preference number: 5 (lower is better)
Translates to: PKAAFSPIRKPRLLYLRIAKLKH*RGTDVP
Trigger: TGGGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGC...TATTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp AGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAAGCACATTTCCTTCCCTaGCAAAGACCTCTAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SLRRHFPPSESRGSCTSEAHFLP*QRPLAC
Trigger: GCAGGCTAGAGGTCTTTGCAAGGGAAGGAAATGTGC...TTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp CGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACCCCGCAATGATGATGTaGGGCACATTTCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: RHRINGVEAKLKHLRGTDPAMMM*GTFPSL
Trigger: AAGGGAAGGAAATGTGCCCAACATCATCATTGCGGG...GTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp TTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTGAGAATGCTTGTGGTCTaGCCGGTTCCTGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: FSITFISLVRIWASVSFVRMLVV*PVPGGP
Trigger: GGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCT...CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CAA 90 bp TTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCTCAGAATGCTTGTGGTCTaGCCGGTTCCTGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: LMKPNPEKVDCRLFSACLRMLVV*PVPGGP
Trigger: GGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCT...GAGGCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CAA 90 bp CCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTCCAAGCACAGAATGCTaGTGGTCTTGCCGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: PEDCTAGLNGLDDLIRSIPSTEC*WSCRFL
Trigger: CAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGG...AATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CAA 90 bp GGCCAAACTCAAACACTTGCGGGGCACAGACGTCCCAGAAGCAAACATGCAAGTAAGGTGGACTGCAGGTaGTTCAGCGCCTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: GQTQTLAGHRRPRSKHASKVDCR*FSACLM
Trigger: CATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTT...ACTTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp CAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAGGCTCGTCACAGACCTaGAACACGTTCTCACTGTTA +
Preference number: 5 (lower is better)
Translates to: QPKAAFSPIRKPRLLYLRGSSQT*NTFSLL
Trigger: TAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC...TCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CAA 90 bp ATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTGGTTCTCCTCAAGGCTaGCTGGGCTCCGTCGGTCAT +
Preference number: 5 (lower is better)
Translates to: MGSMILSEALQARAKRVVGSPQG*LGSVGH
Trigger: ATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAACC...AACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR CAA 90 bp TCCTGGAGGGCCCTGGGAATGAGATCTCCAGTAAAGACTTCAAACCACCAGAAGAAGGTGGACTGCAGGTaGTTCAGCGCCTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: SWRALGMRSPVKTSNHQKKVDCR*FSACLM
Trigger: CATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTT...CTTCTGGTGGTTTGAAGTCTTTACTGGAGATCTCATTCCCAGGGCCCTCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479105.6
CDS-3UTR CAA 90 bp GCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAAAGGTGGACTGCAGGTaGTTCAGCGCCTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: AGLNGLDDLIRSITSKGEKVDCR*FSACLM
Trigger: CATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTT...TTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR CAA 90 bp TTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTGAAGGTGGACTGCAGGTaGTTCAGCGCCTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: FSITFISLVRIWASVSFVKVDCR*FSACLM
Trigger: CATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTT...CACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR CAA 90 bp GAGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCTCTTCTGACACAGCCTaGCCAGGAGGCCTGCCATCT +
Preference number: 5 (lower is better)
Translates to: EFKGQSCWLQPKAAFSPISSDTA*PGGLPS
Trigger: AGATGGCAGGCCTCCTGGCAAGGCTGTGTCAGAAGA...GATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CAA 90 bp CCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCAGAATATGCAATGGTGTGATCTaGGCTCACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: PKAAFSPIRKPRLLYLRICNGVI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGATCACACCATTGCA...TATTCTGAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp CTTTGTGTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCGCACATTTCCTTCCCTaGCAAAGACCTCTAGCCTGC +
Preference number: 5 (lower is better)
Translates to: LCVPEDCTAGLNGLDDLIAHFLP*QRPLAC
Trigger: GCAGGCTAGAGGTCTTTGCAAGGGAAGGAAATGTGC...GATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000480432.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR CAA 90 bp CCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTCCCGCAATGATGATGTaGGGCACATTTCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: PEDCTAGLNGLDDLIRSIPAMMM*GTFPSL
Trigger: AAGGGAAGGAAATGTGCCCAACATCATCATTGCGGG...AATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CAA 90 bp GGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGTGTGGTTCTCCTCAAGGCTaGCTGGGCTCCGTCGGTCAT +
Preference number: 5 (lower is better)
Translates to: GLPSAKESSLLPLFSCECGSPQG*LGSVGH
Trigger: ATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAACC...ACACTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497430.1
CDS-3UTR CAA 90 bp TGTGTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAGGCTCGTCACAGACCTaGAACACGTTCTCACTGTTA +
Preference number: 5 (lower is better)
Translates to: CVPEDCTAGLNGLDDLIRGSSQT*NTFSLL
Trigger: TAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC...TCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR CAA 90 bp CTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCTCCTGTACCTCCACACTCGAAAGATGTaGCCAATGATATCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: LQPKAAFSPIRKPRLLYLHTRKM*PMISSG
Trigger: ACCAGAAGATATCATTGGCAACATCTTTCGAGTGTG...GAGGTACAGGAGCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CAA 90 bp GGAGGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGTCTTCTGACACAGCCTaGCCAGGAGGCCTGCCATCT +
Preference number: 5 (lower is better)
Translates to: GGLPSAKESSLLPLFSCESSDTA*PGGLPS
Trigger: AGATGGCAGGCCTCCTGGCAAGGCTGTGTCAGAAGA...CTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485545.5
ENST00000497430.1
CDS-3UTR CAA 90 bp GGCCAAACTCAAACACTTGCGGGGCACAGACGTCCCAGAAGCAAACATGCAAGTTGCAATGGTGTGATCTaGGCTCACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: GQTQTLAGHRRPRSKHASCNGVI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGATCACACCATTGCA...ACTTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp CTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTGCACATTTCCTTCCCTaGCAAAGACCTCTAGCCTGC +
Preference number: 5 (lower is better)
Translates to: LLDNIHQPGEDLGVGQLCAHFLP*QRPLAC
Trigger: GCAGGCTAGAGGTCTTTGCAAGGGAAGGAAATGTGC...ACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000480432.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR CAA 90 bp ACAGCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGCACATTTCCTTCCCTaGCAAAGACCTCTAGCCTGC +
Preference number: 5 (lower is better)
Translates to: TAGLNGLDDLIRSITSKGAHFLP*QRPLAC
Trigger: GCAGGCTAGAGGTCTTTGCAAGGGAAGGAAATGTGC...GCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000480432.5
ENST00000493156.6
ENST00000494019.5
CDS-3UTR CAA 90 bp GAGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCGCACATTTCCTTCCCTaGCAAAGACCTCTAGCCTGC +
Preference number: 5 (lower is better)
Translates to: EFKGQSCWLQPKAAFSPIAHFLP*QRPLAC
Trigger: GCAGGCTAGAGGTCTTTGCAAGGGAAGGAAATGTGC...GATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp CAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGGTGGACAGAATGCTTGTGGTCTaGCCGGTTCCTGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: QTLNTFSLLMKPNPEKVDRMLVV*PVPGGP
Trigger: GGGCCCTCCAGGAACCGGCAAGACCACAAGCATTCT...GTCCACCTTCTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
CDS-3UTR CAA 90 bp AATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTCCAAGCACAGAATGCTaGTGGTCTTGCCGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: NGLDDLIRSITSKGEASGPSTEC*WSCRFL
Trigger: CAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGG...ACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CAA 90 bp GGCTCGTCACAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTaGTTCAGCGCCTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: GSSQTLNTFSLLMKPNPEKVDCR*FSACLM
Trigger: CATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTT...CTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR CAA 90 bp CTCCTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTGGCTCGTCACAGACCTaGAACACGTTCTCACTGTTA +
Preference number: 5 (lower is better)
Translates to: LLLDNIHQPGEDLGVGQLGSSQT*NTFSLL
Trigger: TAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC...AAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR CAA 90 bp GGCCAAACTCAAACACTTGCGGGGCACAGACGTCCCAGAAGCAAACATGCAAGTGGCTCGTCACAGACCTaGAACACGTTCTCACTGTTA +
Preference number: 5 (lower is better)
Translates to: GQTQTLAGHRRPRSKHASGSSQT*NTFSLL
Trigger: TAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC...ACTTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp ACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGACGTCCCACACTCGAAAGATGTaGCCAATGATATCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: TASMGWRPNSNTCGAQTSHTRKM*PMISSG
Trigger: ACCAGAAGATATCATTGGCAACATCTTTCGAGTGTG...GGACGTCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp CAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCACACTCGAAAGATGTaGCCAATGATATCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: QSCWLQPKAAFSPIRKPRHTRKM*PMISSG
Trigger: ACCAGAAGATATCATTGGCAACATCTTTCGAGTGTG...CCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CAA 90 bp GCGGGACTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAACCCGCAATGATGATGTaGGGCACATTTCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: AGLNGLDDLIRSITSKGEPAMMM*GTFPSL
Trigger: AAGGGAAGGAAATGTGCCCAACATCATCATTGCGGG...TTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAGTCCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CAA 90 bp CTGTTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCCCGCAATGATGATGTaGGGCACATTTCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: LLMKPNPEKVDCRLFSACPAMMM*GTFPSL
Trigger: AAGGGAAGGAAATGTGCCCAACATCATCATTGCGGG...GCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CAA 90 bp GGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTACCAAGCACAGAATGCTaGTGGTCTTGCCGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: GSMILSEALQARAKRVVLPSTEC*WSCRFL
Trigger: CAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGG...TAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CAA 90 bp ATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATGGTTCTCCTGGTTCTCCTCAAGGCTaGCTGGGCTCCGTCGGTCAT +
Preference number: 5 (lower is better)
Translates to: ITSKGEASGFRVDFHGSPGSPQG*LGSVGH
Trigger: ATGACCGACGGAGCCCAGCAAGCCTTGAGGAGAACC...AGGAGAACCATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CAA 90 bp TTAATGAAGCCAAATCCTGAGAAGGTGGACTGCAGGTTGTTCAGCGCCTGCCTCGGCTCGTCACAGACCTaGAACACGTTCTCACTGTTA +
Preference number: 5 (lower is better)
Translates to: LMKPNPEKVDCRLFSACLGSSQT*NTFSLL
Trigger: TAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC...GAGGCAGGCGCTGAACAACCTGCAGTCCACCTTCTCAGGATTTGGCTTCATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR CAA 90 bp GGTCAGCTTTGTGTACCGGAGGACTGCACAGCGGGACTGAATGGGCTCGATGATCACACTCGAAAGATGTaGCCAATGATATCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: GQLCVPEDCTAGLNGLDDHTRKM*PMISSG
Trigger: ACCAGAAGATATCATTGGCAACATCTTTCGAGTGTG...ATCATCGAGCCCATTCAGTCCCGCTGTGCAGTCCTCCGGTACACAAAGCTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470266.5
ENST00000480432.5
ENST00000494019.5
CDS-3UTR CAA 90 bp AGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCAGAAAGCCGCGGCGTGTATCCAATTTCCTaGATAAACTCCAGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: SHVGSSLRRHFPPSESRGVYPIS*INSSFR
Trigger: CCTGAAACTGGAGTTTATCAAGGAAATTGGATACAC...GCCGCGGCTTTCTGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000485545.5
ENST00000621097.4
CDS-3UTR CAA 90 bp CCGTCACCGCATCAATGGGGTGGAGGCCAAACTCAAACACTTGCGGGGCACAGAGTGTATCCAATTTCCTaGATAAACTCCAGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: PSPHQWGGGQTQTLAGHRVYPIS*INSSFR
Trigger: CCTGAAACTGGAGTTTATCAAGGAAATTGGATACAC...TCTGTGCCCCGCAAGTGTTTGAGTTTGGCCTCCACCCCATTGATGCGGTGACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp AGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCATGCAATGGTGTGATCTaGGCTCACTGCAACCTCCAC +
Preference number: 5 (lower is better)
Translates to: SLKDSHVGSSLRRHFPPSCNGVI*AHCNLH
Trigger: GTGGAGGTTGCAGTGAGCCAAGATCACACCATTGCA...TGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp ATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTCCCGCAATGATGATGTaGGGCACATTTCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: MGSMILSEALQARAKRVVPAMMM*GTFPSL
Trigger: AAGGGAAGGAAATGTGCCCAACATCATCATTGCGGG...AACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CAA 90 bp AGTTTAAAGGACAGTCATGTTGGCTCCAGCCTAAGGCGGCATTTTCCCCCATCACCCGCAATGATGATGTaGGGCACATTTCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: SLKDSHVGSSLRRHFPPSPAMMM*GTFPSL
Trigger: AAGGGAAGGAAATGTGCCCAACATCATCATTGCGGG...TGATGGGGGAAAATGCCGCCTTAGGCTGGAGCCAACATGACTGTCCTTTAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp TGCGGGGCACAGACGTCCCAGAAGCAAACATGCAAGTCACGGGAGTTTATTTATGGCTCGTCACAGACCTaGAACACGTTCTCACTGTTA +
Preference number: 5 (lower is better)
Translates to: CGAQTSQKQTCKSREFIYGSSQT*NTFSLL
Trigger: TAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC...ATAAATAAACTCCCGTGACTTGCATGTTTGCTTCTGGGACGTCTGTGCCCCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS-3UTR CAA 90 bp CTGAATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGCTCGTCACAGACCTaGAACACGTTCTCACTGTTA +
Preference number: 5 (lower is better)
Translates to: LNGLDDLIRSITSKGEASGSSQT*NTFSLL
Trigger: TAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC...ACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR CAA 90 bp AATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTGGCTCGTCACAGACCTaGAACACGTTCTCACTGTTA +
Preference number: 5 (lower is better)
Translates to: NGLDDLIRSITSKGEASGGSSQT*NTFSLL
Trigger: TAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC...ACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000470266.5
ENST00000479105.6
ENST00000480432.5
ENST00000491206.5
ENST00000494019.5
CDS-3UTR CAA 90 bp GGAGGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGGGCTCGTCACAGACCTaGAACACGTTCTCACTGTTA +
Preference number: 5 (lower is better)
Translates to: GGLPSAKESSLLPLFSCEGSSQT*NTFSLL
Trigger: TAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC...CTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485545.5
ENST00000497430.1
CDS-3UTR CAA 90 bp ATGGGCTCGATGATCTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTGCACATTTCCTTCCCTaGCAAAGACCTACGGCGAAA +
Preference number: 5 (lower is better)
Translates to: MGSMILSEALQARAKRVVAHFLP*QRPTAK
Trigger: TTTCGCCGTAGGTCTTTGCAAGGGAAGGAAATGTGC...AACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAGATCATCGAGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479105.6
ENST00000491206.5
CDS-3UTR CAA 90 bp CTTATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCCAAGCACAGAATGCTaGTGGTCTTGCCGGTTCCTG +
Preference number: 5 (lower is better)
Translates to: LIRSITSKGEASGFRVDFPSTEC*WSCRFL
Trigger: CAGGAACCGGCAAGACCACAAGCATTCTGTGCTTGG...GAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000479105.6
ENST00000491206.5
ENST00000493156.6
CDS-3UTR CAA 90 bp GAGGCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGTGGCTCGTCACAGACCTaGAACACGTTCTCACTGTTA +
Preference number: 5 (lower is better)
Translates to: EACHLQKRVHSFRYFHVSGSSQT*NTFSLL
Trigger: TAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC...ACTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485545.5
ENST00000497430.1
CDS-3UTR CAA 90 bp GGCTCGTCACAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGGCACATTTCCTTCCCTaGCAAAGACCTACGGCGAAA +
Preference number: 5 (lower is better)
Translates to: GSSQTLNTFSLLMKPNPEAHFLP*QRPTAK
Trigger: TTTCGCCGTAGGTCTTTGCAAGGGAAGGAAATGTGC...CTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479105.6
ENST00000491206.5
CDS-3UTR CAA 90 bp ATCCGAAGCATTACAAGCAAGGGCGAAGCGAGTGGTTTTAGAGTAGATTTCCATGCACATTTCCTTCCCTaGCAAAGACCTCTAGCCTGC +
Preference number: 5 (lower is better)
Translates to: IRSITSKGEASGFRVDFHAHFLP*QRPLAC
Trigger: GCAGGCTAGAGGTCTTTGCAAGGGAAGGAAATGTGC...ATGGAAATCTACTCTAAAACCACTCGCTTCGCCCTTGCTTGTAATGCTTCGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000463194.1
ENST00000470266.5
ENST00000480432.5
ENST00000493156.6
CDS-3UTR CAA 90 bp CTTCTCGATAACATTCATCAGCCTGGTGAGGATCTGGGCGTCGGTCAGCTTTGTCACACTCGAAAGATGTaGCCAATGATATCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: LLDNIHQPGEDLGVGQLCHTRKM*PMISSG
Trigger: ACCAGAAGATATCATTGGCAACATCTTTCGAGTGTG...ACAAAGCTGACCGACGCCCAGATCCTCACCAGGCTGATGAATGTTATCGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000470266.5
ENST00000480432.5
ENST00000494019.5
CDS-3UTR CAA 90 bp GGCTCGTCACAGACCTTGAACACGTTCTCACTGTTAATGAAGCCAAATCCTGAGTGCGCAATGATGATGTaGGGCACATTTCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: GSSQTLNTFSLLMKPNPECAMMM*GTFPSL
Trigger: AAGGGAAGGAAATGTGCCCAACATCATCATTGCGCA...CTCAGGATTTGGCTTCATTAACAGTGAGAACGTGTTCAAGGTCTGTGACGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494019.5
CDS-3UTR CAA 90 bp GTATCCAATTTCCTATTAGAATGGCTTAAAAACCAAACTGAGCACTCCATGTGGAAGGTGGACTGCAGGTaGTTCAGCGCCTGCCTCATG +
Preference number: 5 (lower is better)
Translates to: VSNFLLEWLKNQTEHSMWKVDCR*FSACLM
Trigger: CATGAGGCAGGCGCTGAACAACCTGCAGTCCACCTT...CCACATGGAGTGCTCAGTTTGGTTTTTAAGCCATTCTAATAGGAAATTGGATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497430.1
CDS-3UTR CAA 90 bp GCCTGCCATCTGCAAAAGAGAGTTCACTCCTTCCGCTATTTTCATGTGAGTGTACACACTCGAAAGATGTaGCCAATGATATCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: ACHLQKRVHSFRYFHVSVHTRKM*PMISSG
Trigger: ACCAGAAGATATCATTGGCAACATCTTTCGAGTGTG...TACACTCACATGAAAATAGCGGAAGGAGTGAACTCTCTTTTGCAGATGGCAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485545.5
ENST00000497430.1
CDS-3UTR CAA 90 bp GTATCCAATTTCCTATTAGAATGGCTTAAAAACCAAACTGAGCACTCCATGTGGCCGTTTGGCAGTTCCTaGATAAACTCCAGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: VSNFLLEWLKNQTEHSMWPFGSS*INSSFR
Trigger: CCTGAAACTGGAGTTTATCAAGGAACTGCCAAACGG...CCACATGGAGTGCTCAGTTTGGTTTTTAAGCCATTCTAATAGGAAATTGGATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497430.1
CDS-3UTR CAA 90 bp GGCACAGACGTCCCAGAAGCAAACATGCAAGTCACGGGAGTTTATTTATTTAATGTGTATCCAATTTCCTaGATAAACTCCAGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: GTDVPEANMQVTGVYLFNVYPIS*INSSFR
Trigger: CCTGAAACTGGAGTTTATCAAGGAAATTGGATACAC...ATTAAATAAATAAACTCCCGTGACTTGCATGTTTGCTTCTGGGACGTCTGTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000055077.8
ENST00000352131.7
ENST00000621097.4
CDS GCA 72 bp GTTGAGGATCCTCCGGAATGCTGGTGGGAATGCACGTaGTGCAGCCACTTCGGAAAACCGTTTGGCAGTTCC +
Preference number: 6 (lower is better)
Translates to: VEDPPECWWECT*CSHFGKPFGSS
Trigger: GGAACTGCCAAACGGTTTTCCGAAGTGGCTGCAGCACGTGCATTCCCACCAGCATTCCGGAGGATCCTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497430.1
CDS CAA 72 bp CTTGCTGGGCTCCGTCGGTCATGCGCAATGATGATGTaGGGCACATTTCCTTCCCTTGCAAAGACCTCTAGC +
Preference number: 6 (lower is better)
Translates to: LAGLRRSCAMMM*GTFPSLAKTSS
Trigger: GCTAGAGGTCTTTGCAAGGGAAGGAAATGTGCCCAACATCATCATTGCGCATGACCGACGGAGCCCAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494019.5
CDS CAA 72 bp TGCATCTCCGTCACCTCTGACCCCGCAATGATGATGTaGGGCACATTTCCTTCCCTTGCAAAGACCTCTAGC +
Preference number: 6 (lower is better)
Translates to: CISVTSDPAMMM*GTFPSLAKTSS
Trigger: GCTAGAGGTCTTTGCAAGGGAAGGAAATGTGCCCAACATCATCATTGCGGGGTCAGAGGTGACGGAGATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463194.1
ENST00000470266.5
CDS CAA 72 bp TATTCCTCACAACGTCAATGCCCCGCAATGATGATGTaGGGCACATTTCCTTCCCTTGCAAAGACCTCTAGC +
Preference number: 6 (lower is better)
Translates to: YSSQRQCPAMMM*GTFPSLAKTSS
Trigger: GCTAGAGGTCTTTGCAAGGGAAGGAAATGTGCCCAACATCATCATTGCGGGGCATTGACGTTGTGAGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480432.5
ENST00000621097.4