RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RFC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000035928

Ensembl transcript IDs: ENST00000349703.7, ENST00000381897.5, ENST00000418436.5, ENST00000502706.1, ENST00000502991.5, ENST00000503784.1, ENST00000504554.1, ENST00000504849.5, ENST00000504974.1, ENST00000509084.1, ENST00000510783.5, ENST00000512275.5, ENST00000512726.1, ENST00000512881.5, ENST00000514572.1, ENST00000639695.1

Found 346 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGTaGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTG +
Preference number: 1 (lower is better)
Translates to: PHNRPLHEILFTAET*STHTEGVRLGIRVL
Trigger: CAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR CCA 90 bp CCCCACCATAGTGAAATTAAGAGCCTGACCCAGCCTGGTTCCTACTaGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGAATGTC +
Preference number: 1 (lower is better)
Translates to: PHHSEIKSLTQPGSY*SEPDGLRLQKDKNV
Trigger: GACATTCTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTGGGTCAGGCTCTTAATTTCACTATGGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR-3UTR TCA 90 bp GTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACGATCCTTCACACACAGAGGGAGTaGGGCTGGGAATCCGAGTTC +
Preference number: 2 (lower is better)
Translates to: VSSPKQDYQFLKAGNTILHTQRE*GWESEF
Trigger: GAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTG...AAGGATCGTATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR-3UTR CCA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGATTGACAGAGGACAGTaGAGGACCCAAGCAGTCCTA +
Preference number: 2 (lower is better)
Translates to: AAKPHNRPLHEILFTAETIDRGQ*RTQAVL
Trigger: TAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAAT...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR-3UTR TCA 90 bp GAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACTCCCAGTTCTAGGTGGTaGCTGTTTTGTATAATCATT +
Preference number: 2 (lower is better)
Translates to: ETWSTHTEGVRLGIRVLTPSSRW*LFCIII
Trigger: AATGATTATACAAAACAGTCACCACCTAGAACTGGG...AGTCAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR-3UTR CCA 90 bp GAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACTAGGGAGAGTAAAAAGTaGCTGTCGCTAGTGAAAAAT +
Preference number: 2 (lower is better)
Translates to: ETWSTHTEGVRLGIRVLTRESKK*LSLVKN
Trigger: ATTTTTCACTAGCGACAGCCACTTTTTACTCTCCCT...AGTCAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR-3UTR CCA 90 bp CTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCAGTCCTATCAACCTCTACTAGACCAGCTGGACTaGTCAGGAGGGAGAGTAAAA +
Preference number: 2 (lower is better)
Translates to: LTRLTEDSGGPKQSYQPLLDQLD*SGGRVK
Trigger: TTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAG...TAGAGGTTGATAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR-3UTR TCA 90 bp CAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGCCCAGTTCTAGGTGGTaGCTGTTTTGTATAATCATT +
Preference number: 2 (lower is better)
Translates to: QPGSYWSEPDGLRLQKDKPSSRW*LFCIII
Trigger: AATGATTATACAAAACAGTCACCACCTAGAACTGGG...CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR-3UTR CCA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACAGCCTGGTTCCTACTaGTCTGAACCTGATGGGTTG +
Preference number: 2 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIQPGSY*SEPDGL
Trigger: CAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR-3UTR CCA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATATTCCAACAGGGTTTGTaGAAGCCATCACAGGACAGG +
Preference number: 2 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIFQQGL*KPSQDR
Trigger: CCTGTCCTGTGATGGCTTCCACAAACCCTGTTGGAA...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR-3UTR TCA 90 bp TACAGTTTAAATGTCTCAAGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTGGGAATCCGAGTTCTaGCTCCTCGACTGCCAATGT +
Preference number: 2 (lower is better)
Translates to: YSLNVSRTLSHHPNKTTSWESEF*LLDCQC
Trigger: ACATTGGCAGTCGAGGAGTCAGAACTCGGATTCCCA...ACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR-3UTR TCA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATAGGTAGCACAGACCTCTaGGCATTTACCAACAAGATT +
Preference number: 2 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIGSTDL*AFTNKI
Trigger: AATCTTGTTGGTAAATGCTCAGAGGTCTGTGCTACC...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR-3UTR CCA 90 bp TACAGTTTAAATGTCTCAAGAACTTTGTCTCATCACCCAAACAAGACTACCAGTATTGACAGAGGACAGTaGAGGACCCAAGCAGTCCTA +
Preference number: 2 (lower is better)
Translates to: YSLNVSRTLSHHPNKTTSIDRGQ*RTQAVL
Trigger: TAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAAT...ACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR-3UTR CCA 90 bp TACAGTTTAAATGTCTCAAGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTTCACAGCAGAGACGTaGTCAACACACACAGAGGGA +
Preference number: 2 (lower is better)
Translates to: YSLNVSRTLSHHPNKTTSFTAET*STHTEG
Trigger: TCCCTCTGTGTGTGTTGACCACGTCTCTGCTGTGAA...ACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR-3UTR TCA 90 bp TACAGTTTAAATGTCTCAAGAACTTTGTCTCATCACCCAAACAAGACTACCAGTCTCTCAGGGGCAAAGTaGACAAAAGCCAGTGTTCAT +
Preference number: 2 (lower is better)
Translates to: YSLNVSRTLSHHPNKTTSLSGAK*TKASVH
Trigger: ATGAACACTGGCTTTTGTTCACTTTGCCCCTGAGAG...ACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR-3UTR TCA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATATTGTTAACTAAAATCTaGCTCCAAAGCCCAGGTGTA +
Preference number: 2 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGILLTKI*LQSPGV
Trigger: TACACCTGGGCTTTGGAGTCAGATTTTAGTTAACAA...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR-3UTR GCA 90 bp TACAGTTTAAATGTCTCAAGAACTTTGTCTCATCACCCAAACAAGACTACCAGTCCCATAACAGACCACTaGATGAAATCCTATTCACAG +
Preference number: 2 (lower is better)
Translates to: YSLNVSRTLSHHPNKTTSPITDH*MKSYSQ
Trigger: CTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGG...ACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR CAA 90 bp GACATTTTTCACACTGGTAAATACAGTTTAAATGTCTCAAGAACTTaGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGA +
Preference number: 2 (lower is better)
Translates to: DIFHTGKYSLNVSRT*SHHPNKTTSSLKQG
Trigger: TCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTATTTACCAGTGTGAAAAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR-3UTR TCA 90 bp AAAATGGTACTTTTTCTAACAGAACATATGGCCGTCAATATCATGGCCTGTTTTAAAGATCATCTATTTTaGGGTTCTCCTGTCTGTGGC +
Preference number: 2 (lower is better)
Translates to: KMVLFLTEHMAVNIMACFKDHLF*GSPVCG
Trigger: GCCACAGACAGGAGAACCTCAAAATAGATGATCTTT...AAAACAGGCCATGATATTGACGGCCATATGTTCTGTTAGAAAAAGTACCATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000514572.1
3UTR CCA 72 bp AGACCACTGCATGAAATCCTATTCACAGCAGAGACGTaGTCAACACACACAGAGGGAGTGAGGCTGGGAATC +
Preference number: 3 (lower is better)
Translates to: RPLHEILFTAET*STHTEGVRLGI
Trigger: GATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR CCA 72 bp AGTGAAATTAAGAGCCTGACCCAGCCTGGTTCCTACTaGTCTGAACCTGATGGGTTGAGACTCCAGAAGGAT +
Preference number: 3 (lower is better)
Translates to: SEIKSLTQPGSY*SEPDGLRLQKD
Trigger: ATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTGGGTCAGGCTCTTAATTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR TCA 72 bp CCCAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTaGGACTCCAGAAGGATAAGAATGTCTGAGAATCTT +
Preference number: 3 (lower is better)
Translates to: PSLVPTGLNLMG*DSRRIRMSENL
Trigger: AAGATTCTCAGACATTCTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR-3UTR CAA 90 bp CTCCTCGACTGCCAATGTTATGTTTCACACAACAGGTTAGTAAGGAATACAGTGGCACGTCTAACTAGATaGACAGAGGACAGTGGAGGA +
Preference number: 3 (lower is better)
Translates to: LLDCQCYVSHNRLVRNTVARLTR*TEDSGG
Trigger: TCCTCCACTGTCCTCTGTCAATCTAGTTAGACGTGC...CACTGTATTCCTTACTAACCTGTTGTGTGAAACATAACATTGGCAGTCGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR TCA 72 bp CTACTGCTCCCAGGCTCATTATTGTTAACTAAAATCTaGCTCCAAAGCCCAGGTGTAGTTTCTAGTTCCAAT +
Preference number: 3 (lower is better)
Translates to: LLLPGSLLLTKI*LQSPGVVSSSN
Trigger: ATTGGAACTAGAAACTACACCTGGGCTTTGGAGTCAGATTTTAGTTAACAATAATGAGCCTGGGAGCAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR-3UTR CAA 90 bp TCAATATCATGGCCTGTTTTCTTGCTGTTTGGCTCTTCGACTACCATAAGAAACGAAAGATCATCTATTTaGAGGTTCTCCTGTCTGTGG +
Preference number: 3 (lower is better)
Translates to: SISWPVFLLFGSSTTIRNERSSI*RFSCLW
Trigger: CCACAGACAGGAGAACCTCAAAATAGATGATCTTTC...GTTTCTTATGGTAGTCGAAGAGCCAAACAGCAAGAAAACAGGCCATGATATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514572.1
3UTR CCA 72 bp ATGGCCGTCAATATCATGGCCTGTTTTCTTGCTGTTTaGCTCTTCGACTACCATAAGAAACTTTATAAAAAT +
Preference number: 3 (lower is better)
Translates to: MAVNIMACFLAV*LFDYHKKLYKN
Trigger: ATTTTTATAAAGTTTCTTATGGTAGTCGAAGAGCCAAACAGCAAGAAAACAGGCCATGATATTGACGGCCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514572.1
CDS-3UTR TCA 90 bp GAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACTGGCGGGTGGGCCGGTTaGGGAATCTGTTATCGAGGC +
Preference number: 4 (lower is better)
Translates to: ETWSTHTEGVRLGIRVLTGGWAG*GICYRG
Trigger: GCCTCGATAACAGATTCCTCAACCGGCCCACCCGCC...AGTCAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp AGCCTGACCCAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGCACACACAGAGGGAGTaGGGCTGGGAATCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: SLTQPGSYWSEPDGLRLQHTQRE*GWESEF
Trigger: GAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTG...CTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTGGGTCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp ACAAGGCTTTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCGGCGGGTGGGCCGGTTaGGGAATCTGTTATCGAGGC +
Preference number: 4 (lower is better)
Translates to: TRLSLDQLDWSGGRVKSGGGWAG*GICYRG
Trigger: GCCTCGATAACAGATTCCTCAACCGGCCCACCCGCC...GCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAAAGCCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp CTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCAGTCCTATCAACCTCTAGATGAAGGCGCTGGCTaGCTGGCGGGTGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: LTRLTEDSGGPKQSYQPLDEGAG*LAGGPV
Trigger: AACCGGCCCACCCGCCAGCCAGCCAGCGCCTTCATC...TAGAGGTTGATAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp GCAGAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGGGGAAGGTGGGAAACTaGGTCATGTACCCCCTCATC +
Preference number: 4 (lower is better)
Translates to: AETWSTHTEGVRLGIRVLGKVGN*VMYPLI
Trigger: GATGAGGGGGTACATGACCCAGTTTCCCACCTTCCC...CAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTATCGCAGCCCCAGGATaGAGGCGCTGGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTAIAAPG*RRWLAG
Trigger: GCCAGCCAGCCAGCGCCTTCATCCTGGGGCTGCGAT...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp AGCCTGACCCAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAGTCTCCTCTCCAGCTaGAAACACTTTCCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: SLTQPGSYWSEPDGLRLQSLLSS*KHFPGN
Trigger: GTTGCCCGGAAAGTGTTTGCAGCTGGAGAGGAGACT...CTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTGGGTCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp AGCCTGACCCAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGTGCTTACTCCGGATCTaGCTGTCCACTAGGTCACCA +
Preference number: 4 (lower is better)
Translates to: SLTQPGSYWSEPDGLRLQCLLRI*LSTRSP
Trigger: TGGTGACCTAGTGGACAGCCAGATCCGGAGTAAGCA...CTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTGGGTCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp GCAGAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGGAACACTGGCATAAATaGCCTGCGCAGGCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: AETWSTHTEGVRLGIRVLEHWHK*PAQAED
Trigger: GTCTTCTGCCTGCGCAGGCCATTTATGCCAGTGTTC...CAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp GAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACTGGGAAGGTGGGAAACTaGGTCATGTACCCCCTCATC +
Preference number: 4 (lower is better)
Translates to: ETWSTHTEGVRLGIRVLTGKVGN*VMYPLI
Trigger: GATGAGGGGGTACATGACCCAGTTTCCCACCTTCCC...AGTCAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp AGCCTGACCCAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGTCGGAAGAACTCTTTTaGCAGTTTCGGAGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: SLTQPGSYWSEPDGLRLQSEELF*QFRSQR
Trigger: ACGCTGGCTCCGAAACTGGCAAAAGAGTTCTTCCGA...CTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTGGGTCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp GCAGAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGCTCCCCTATCCTCATTaGCTGCCATGCCATCTACTT +
Preference number: 4 (lower is better)
Translates to: AETWSTHTEGVRLGIRVLLPYPH*LPCHLL
Trigger: AAGTAGATGGCATGGCAGGCAATGAGGATAGGGGAG...CAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp CAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGTTGCCTGTAGACGAGTaGTTCCCCAGCCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: QPGSYWSEPDGLRLQKDKLPVDE*FPSQLG
Trigger: CCCAAGCTGGCTGGGGAAGCACTCGTCTACAGGCAA...CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp GAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACTGAACACTGGCATAAATaGCCTGCGCAGGCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: ETWSTHTEGVRLGIRVLTEHWHK*PAQAED
Trigger: GTCTTCTGCCTGCGCAGGCCATTTATGCCAGTGTTC...AGTCAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp GCAGAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGCTAGACCAGCTGGACTaGTCAGGAGGGAGAGTAAAA +
Preference number: 4 (lower is better)
Translates to: AETWSTHTEGVRLGIRVLLDQLD*SGGRVK
Trigger: TTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAG...CAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp GCAGAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGATTGGCTTGGACAGATaGAAACGTTTCTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: AETWSTHTEGVRLGIRVLIGLDR*KRFSRF
Trigger: GAAGCGGGAGAAACGTTTTCATCTGTCCAAGCCAAT...CAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp GAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACTCTTGGGATCCAGCTTTaGAAAGGGACTAGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: ETWSTHTEGVRLGIRVLTLGIQL*KGTRFA
Trigger: GGCAAACCTAGTCCCTTTTCAAAGCTGGATCCCAAG...AGTCAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp AGCCTGACCCAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGAATGTCTaGGAATCTTCTGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: SLTQPGSYWSEPDGLRLQKDKNV*ESSAAP
Trigger: GGGGGCTGCAGAAGATTCTCAGACATTCTTATCCTT...CTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTGGGTCAGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp AGCCTGACCCAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGCTCTCAGGGGCAAAGTaGACAAAAGCCAGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: SLTQPGSYWSEPDGLRLQLSGAK*TKASVH
Trigger: ATGAACACTGGCTTTTGTTCACTTTGCCCCTGAGAG...CTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTGGGTCAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp GCAGAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGAGAAGACTCCAGTTTTaGTTACTCCGGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: AETWSTHTEGVRLGIRVLRRLQF*LLRIWL
Trigger: CAGCCAGATCCGGAGTAAGCAAAACTGGAGTCTTCT...CAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGTTGCCTGTAGACGAGTaGTTCCCCAGCCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: AAKPHNRPLHEILFTAETLPVDE*FPSQLG
Trigger: CCCAAGCTGGCTGGGGAAGCACTCGTCTACAGGCAA...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATAAAGGCGCTGGCTGGCTaGCGGGTGGGCCGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIKALAG*RVGRLR
Trigger: CCTCAACCGGCCCACCCGCCAGCCAGCCAGCGCCTT...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp CTCCTCGACTGCCAATGTTATGTTTCACACAACAGGTTAGTAAGGAATACAGTGGATGAAGGCGCTGGCTaGCTGGCGGGTGGGCCGGTT +
Preference number: 4 (lower is better)
Translates to: LLDCQCYVSHNRLVRNTVDEGAG*LAGGPV
Trigger: AACCGGCCCACCCGCCAGCCAGCCAGCGCCTTCATC...CACTGTATTCCTTACTAACCTGTTGTGTGAAACATAACATTGGCAGTCGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp GAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACTAGCGTAGGAGTTTGTTaGCACAGCTCTGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: ETWSTHTEGVRLGIRVLTSVGVC*HSSGHL
Trigger: AAGGTGACCAGAGCTGTGCCAACAAACTCCTACGCT...AGTCAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp GAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACTTTCACAGCAGAGACGTaGTCAACACACACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: ETWSTHTEGVRLGIRVLTFTAET*STHTEG
Trigger: TCCCTCTGTGTGTGTTGACCACGTCTCTGCTGTGAA...AGTCAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp GAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACTTTCCAACAGGGTTTGTaGAAGCCATCACAGGACAGG +
Preference number: 4 (lower is better)
Translates to: ETWSTHTEGVRLGIRVLTFQQGL*KPSQDR
Trigger: CCTGTCCTGTGATGGCTTCCACAAACCCTGTTGGAA...AGTCAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp CAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGTCCGTCTACTCCTTGTaGGGTCAAGGGCTGTACAAG +
Preference number: 4 (lower is better)
Translates to: QPGSYWSEPDGLRLQKDKSVYSL*GQGLYK
Trigger: CTTGTACAGCCCTTGACCTCACAAGGAGTAGACGGA...CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp ACAAGGCTTTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCTGGGAATCCGAGTTCTaGCTCCTCGACTGCCAATGT +
Preference number: 4 (lower is better)
Translates to: TRLSLDQLDWSGGRVKSGWESEF*LLDCQC
Trigger: ACATTGGCAGTCGAGGAGTCAGAACTCGGATTCCCA...GCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAAAGCCTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGAAGCTGTGGTGGTTTTaGCAACACCAGGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AAKPHNRPLHEILFTAETKLWWF*QHQEGL
Trigger: CAGGCCCTCCTGGTGTTGGCAAAACCACCACAGCTT...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp CAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGACACCAGGGAAGCTGTaGTGGTTTTGCCAACACCAG +
Preference number: 4 (lower is better)
Translates to: QPGSYWSEPDGLRLQKDKTPGKL*WFCQHQ
Trigger: CTGGTGTTGGCAAAACCACCACAGCTTCCCTGGTGT...CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp TTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCTGTCGCTATGCTTACTCCGGATCTaGCTGTCCACTAGGTCACCA +
Preference number: 4 (lower is better)
Translates to: FSRPAGLVRRESKKWLSLCLLRI*LSTRSP
Trigger: TGGTGACCTAGTGGACAGCCAGATCCGGAGTAAGCA...TAGCGACAGCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGGCCAGCTTGGGAAGGTaGGAAACTGGGTCATGTACC +
Preference number: 4 (lower is better)
Translates to: AAKPHNRPLHEILFTAETASLGR*ETGSCT
Trigger: GGTACATGACCCAGTTTCCCACCTTCCCAAGCTGGC...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp CAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGCAGCCTGGTTCCTACTaGTCTGAACCTGATGGGTTG +
Preference number: 4 (lower is better)
Translates to: QPGSYWSEPDGLRLQKDKQPGSY*SEPDGL
Trigger: CAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG...CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGAACACCAGGAGGGCCTaGCAGCAACGCTGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: AAKPHNRPLHEILFTAETNTRRA*QQRCFK
Trigger: TTTAAAGCAGCGTTGCTGTCAGGCCCTCCTGGTGTT...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGTCCGTCTACTCCTTGTaGGGTCAAGGGCTGTACAAG +
Preference number: 4 (lower is better)
Translates to: AAKPHNRPLHEILFTAETSVYSL*GQGLYK
Trigger: CTTGTACAGCCCTTGACCTCACAAGGAGTAGACGGA...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp ACAAGGCTTTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCGTGAAATTAAGAGCCTaGCCCAGCCTGGTTCCTACT +
Preference number: 4 (lower is better)
Translates to: TRLSLDQLDWSGGRVKSGVKLRA*PSLVPT
Trigger: AGTAGGAACCAGGCTGGGTCAGGCTCTTAATTTCAC...GCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAAAGCCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp ACAAGGCTTTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCAGCTCTTGTGAAGGCTaGTTTCACCTTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: TRLSLDQLDWSGGRVKSGSSCEG*FHLGIQ
Trigger: CTGGATCCCAAGGTGAAAGCAGCCTTCACAAGAGCT...GCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAAAGCCTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp TTTGAAAGATATCTGACAATGTACAAAGAATACCCAGTTCTAGGTGGTGACTGTAAGGCGCTGGCTGGCTaGCGGGTGGGCCGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: FERYLTMYKEYPVLGGDCKALAG*RVGRLR
Trigger: CCTCAACCGGCCCACCCGCCAGCCAGCCAGCGCCTT...ACAGTCACCACCTAGAACTGGGTATTCTTTGTACATTGTCAGATATCTTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp CAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGCGGCCTTATCACTCTTaGACTGTCCACTATCACGAC +
Preference number: 4 (lower is better)
Translates to: QPGSYWSEPDGLRLQKDKRPYHS*TVHYHD
Trigger: GTCGTGATAGTGGACAGTCCAAGAGTGATAAGGCCG...CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp GCAGAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGCTTGGATTTCTTGCCTaGCATAGTCCGAATCAGATT +
Preference number: 4 (lower is better)
Translates to: AETWSTHTEGVRLGIRVLLGFLA*HSPNQI
Trigger: AATCTGATTCGGACTATGCCAGGCAAGAAATCCAAG...CAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp AGCCTGACCCAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGTGTGAGAATCAGCTTTaGCCTGGTCATAGGTTAATG +
Preference number: 4 (lower is better)
Translates to: SLTQPGSYWSEPDGLRLQCENQL*PGHRLM
Trigger: CATTAACCTATGACCAGGCCAAAGCTGATTCTCACA...CTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTGGGTCAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp CAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGTTCCGAATCCAGGGATaGGCTTGTGCTGTGTCTAGA +
Preference number: 4 (lower is better)
Translates to: QPGSYWSEPDGLRLQKDKFRIQG*ACAVSR
Trigger: TCTAGACACAGCACAAGCCCATCCCTGGATTCGGAA...CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp TTTGAAAGATATCTGACAATGTACAAAGAATACCCAGTTCTAGGTGGTGACTGTATCGCAGCCCCAGGATaGAGGCGCTGGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: FERYLTMYKEYPVLGGDCIAAPG*RRWLAG
Trigger: GCCAGCCAGCCAGCGCCTTCATCCTGGGGCTGCGAT...ACAGTCACCACCTAGAACTGGGTATTCTTTGTACATTGTCAGATATCTTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp TTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCTGTCGCTAATTGGCTTGGACAGATaGAAACGTTTCTCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: FSRPAGLVRRESKKWLSLIGLDR*KRFSRF
Trigger: GAAGCGGGAGAAACGTTTTCATCTGTCCAAGCCAAT...TAGCGACAGCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp GCAGAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGGAGCGAATCTTGGGATaGTTTCTATCATTGCACATA +
Preference number: 4 (lower is better)
Translates to: AETWSTHTEGVRLGIRVLERILG*FLSLHI
Trigger: TATGTGCAATGATAGAAATCATCCCAAGATTCGCTC...CAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp TTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCTGTCGCTATGCAAGGCCAGGTCCTaGACAATACGATCATGTTTG +
Preference number: 4 (lower is better)
Translates to: FSRPAGLVRRESKKWLSLCKARS*TIRSCL
Trigger: CAAACATGATCGTATTGTTCAGGACCTGGCCTTGCA...TAGCGACAGCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp ACAAGGCTTTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCTGCAAGGCCAGGTCCTaGACAATACGATCATGTTTG +
Preference number: 4 (lower is better)
Translates to: TRLSLDQLDWSGGRVKSGCKARS*TIRSCL
Trigger: CAAACATGATCGTATTGTTCAGGACCTGGCCTTGCA...GCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAAAGCCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp ACAAGGCTTTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCAAGGATAAGAATGTCTaGGAATCTTCTGCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: TRLSLDQLDWSGGRVKSGKDKNV*ESSAAP
Trigger: GGGGGCTGCAGAAGATTCTCAGACATTCTTATCCTT...GCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAAAGCCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp GAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACTTCATCAAGCTGTAATTaGTTGGCGATGGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: ETWSTHTEGVRLGIRVLTSSSCN*LAMASS
Trigger: TGATGAAGCCATCGCCAAGCAATTACAGCTTGATGA...AGTCAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp ACAAGGCTTTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCCAGCTCTGGTCACCTTaGTGTCCAATTATGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TRLSLDQLDWSGGRVKSGQLWSP*CPIMVL
Trigger: CAAGACCATAATTGGACAGCAAGGTGACCAGAGCTG...GCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAAAGCCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGCTCCCCTATCCTCATTaGCTGCCATGCCATCTACTT +
Preference number: 4 (lower is better)
Translates to: AAKPHNRPLHEILFTAETLPYPH*LPCHLL
Trigger: AAGTAGATGGCATGGCAGGCAATGAGGATAGGGGAG...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp GCAGAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGGTAATTGCTTGGCGATaGCTTCATCATTTAATCCAG +
Preference number: 4 (lower is better)
Translates to: AETWSTHTEGVRLGIRVLVIAWR*LHHLIQ
Trigger: CTGGATTAAATGATGAAGCCATCGCCAAGCAATTAC...CAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp AGCCTGACCCAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGGTTCTTCATCCAACATaGCTAATGTTCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: SLTQPGSYWSEPDGLRLQVLHPT*LMFWQT
Trigger: AGTTTGCCAGAACATTAGCCATGTTGGATGAAGAAC...CTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTGGGTCAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp GAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACTATTTTCAGCTCCCTTTaGTATTTCTTTGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: ETWSTHTEGVRLGIRVLTIFSSL*YFFGAQ
Trigger: CTGGGCTCCAAAGAAATACCAAAGGGAGCTGAAAAT...AGTCAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp GAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACTCCAGAGAGCGAATCTTaGGATGATTTCTATCATTGC +
Preference number: 4 (lower is better)
Translates to: ETWSTHTEGVRLGIRVLTPESES*DDFYHC
Trigger: GCAATGATAGAAATCATCCCAAGATTCGCTCTCTGG...AGTCAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp ACAAGGCTTTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCAGGCTGCTTTCACCTTaGGATCCAGCTTTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: TRLSLDQLDWSGGRVKSGRLLSP*DPALKR
Trigger: CCTTTTCAAAGCTGGATCCCAAGGTGAAAGCAGCCT...GCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAAAGCCTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp GCAGAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGAGGGAGAGTAAAAAGTaGCTGTCGCTAGTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: AETWSTHTEGVRLGIRVLRESKK*LSLVKN
Trigger: ATTTTTCACTAGCGACAGCCACTTTTTACTCTCCCT...CAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp GCAGAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGGACTTGGAATGTTGCTaGGATTCTTTTGAACTTTCA +
Preference number: 4 (lower is better)
Translates to: AETWSTHTEGVRLGIRVLDLECC*DSFELS
Trigger: TGAAAGTTCAAAAGAATCTCAGCAACATTCCAAGTC...CAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp CTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCAGTCCTATCAACCTCTATCGGAAGAACTCTTTTaGCAGTTTCGGAGCCAGCGT +
Preference number: 4 (lower is better)
Translates to: LTRLTEDSGGPKQSYQPLSEELF*QFRSQR
Trigger: ACGCTGGCTCCGAAACTGGCAAAAGAGTTCTTCCGA...TAGAGGTTGATAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp AGTCATTCAGAAGCACGTCTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGACTCCGGGTGTCACTTaGATTCAGTTCCACGTAGCT +
Preference number: 4 (lower is better)
Translates to: SHSEARLTRLTEDSGGPKTPGVT*IQFHVA
Trigger: AGCTACGTGGAACTGAATGCAAGTGACACCCGGAGT...CTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAGACGTGCTTCTGAATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTTTTCATGTCACCCCCTaGTGCTACAGGCTTCACGTG +
Preference number: 4 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTAFHVTP*CYRLHV
Trigger: CACGTGAAGCCTGTAGCAGCAGGGGGTGACATGAAA...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp GAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACTGTTCTTCATCCAACATaGCTAATGTTCTGGCAAACT +
Preference number: 4 (lower is better)
Translates to: ETWSTHTEGVRLGIRVLTVLHPT*LMFWQT
Trigger: AGTTTGCCAGAACATTAGCCATGTTGGATGAAGAAC...AGTCAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp AGTCATTCAGAAGCACGTCTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCGGCCTTATCACTCTTaGACTGTCCACTATCACGAC +
Preference number: 4 (lower is better)
Translates to: SHSEARLTRLTEDSGGPKRPYHS*TVHYHD
Trigger: GTCGTGATAGTGGACAGTCCAAGAGTGATAAGGCCG...CTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAGACGTGCTTCTGAATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp CTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCAGTCCTATCAACCTCTATTCCAACAGGGTTTGTaGAAGCCATCACAGGACAGG +
Preference number: 4 (lower is better)
Translates to: LTRLTEDSGGPKQSYQPLFQQGL*KPSQDR
Trigger: CCTGTCCTGTGATGGCTTCCACAAACCCTGTTGGAA...TAGAGGTTGATAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp TTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCTGTCGCTAGTCCAATTATGGTCTTaGGCGAGGTTGGCTTATATT +
Preference number: 4 (lower is better)
Translates to: FSRPAGLVRRESKKWLSLVQLWS*ARLAYI
Trigger: AATATAAGCCAACCTCGCTCAAGACCATAATTGGAC...TAGCGACAGCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp ACAAGGCTTTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCGATGCCTTTATAGCTTaGAGTGAGTATGGAGTAAGG +
Preference number: 4 (lower is better)
Translates to: TRLSLDQLDWSGGRVKSGDAFIA*SEYGVR
Trigger: CCTTACTCCATACTCACTTCAAGCTATAAAGGCATC...GCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAAAGCCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp TTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCTGTCGCTAGATGCCTTTATAGCTTaGAGTGAGTATGGAGTAAGG +
Preference number: 4 (lower is better)
Translates to: FSRPAGLVRRESKKWLSLDAFIA*SEYGVR
Trigger: CCTTACTCCATACTCACTTCAAGCTATAAAGGCATC...TAGCGACAGCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGGGTAGCACAGACCTCTaGGCATTTACCAACAAGATT +
Preference number: 4 (lower is better)
Translates to: AAKPHNRPLHEILFTAETGSTDL*AFTNKI
Trigger: AATCTTGTTGGTAAATGCTCAGAGGTCTGTGCTACC...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp TTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCTGTCGCTATCATCAAGCTGTAATTaGTTGGCGATGGCTTCATCA +
Preference number: 4 (lower is better)
Translates to: FSRPAGLVRRESKKWLSLSSSCN*LAMASS
Trigger: TGATGAAGCCATCGCCAAGCAATTACAGCTTGATGA...TAGCGACAGCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp CAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGCCACTTTGTTTTCACTaGTGTCATCAGCCAAATTCC +
Preference number: 4 (lower is better)
Translates to: QPGSYWSEPDGLRLQKDKPLCFH*CHQPNS
Trigger: GGAATTTGGCTGATGACAGCAGTGAAAACAAAGTGG...CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTCAATCGCCTTCAAACTaGTCTTACTCCGGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTAQSPSN*SYSGCH
Trigger: GTGACACCCGGAGTAAGAGCAGTTTGAAGGCGATTG...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp AGTCATTCAGAAGCACGTCTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCCTATCCTCATTGCCTaGCATGCCATCTACTTCATC +
Preference number: 4 (lower is better)
Translates to: SHSEARLTRLTEDSGGPKPILIA*HAIYFI
Trigger: GATGAAGTAGATGGCATGGCAGGCAATGAGGATAGG...CTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAGACGTGCTTCTGAATGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp CTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCAGTCCTATCAACCTCTATGCTGTCTGCTGCTCTaGTTAAAAGCATCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LTRLTEDSGGPKQSYQPLCCLLL*LKASGA
Trigger: AGCACCTGATGCTTTTAAGCAGAGCAGCAGACAGCA...TAGAGGTTGATAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTGGTCACCATCGCATATaGTGTCTGCTGCTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTAGHHRI*CLLLCL
Trigger: TAAGCAGAGCAGCAGACAGCATATGCGATGGTGACC...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp GCCGTCAATATCATGGCCTGTTTTCTTGCTGTTTGGCTCTTCGACTACCATAAGAGCTCTTGTGAAGGCTaGTTTCACCTTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: AVNIMACFLAVWLFDYHKSSCEG*FHLGIQ
Trigger: CTGGATCCCAAGGTGAAAGCAGCCTTCACAAGAGCT...CTTATGGTAGTCGAAGAGCCAAACAGCAAGAAAACAGGCCATGATATTGACGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514572.1
CDS-3UTR GCA 90 bp TTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCTGTCGCTACCCATAACAGACCACTaGATGAAATCCTATTCACAG +
Preference number: 4 (lower is better)
Translates to: FSRPAGLVRRESKKWLSLPITDH*MKSYSQ
Trigger: CTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGG...TAGCGACAGCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp GTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACGATCCTTACACCAGGGAAGCTGTaGTGGTTTTGCCAACACCAG +
Preference number: 4 (lower is better)
Translates to: VSSPKQDYQFLKAGNTILTPGKL*WFCQHQ
Trigger: CTGGTGTTGGCAAAACCACCACAGCTTCCCTGGTGT...AAGGATCGTATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp TTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCTGTCGCTACCAGAGAGCGAATCTTaGGATGATTTCTATCATTGC +
Preference number: 4 (lower is better)
Translates to: FSRPAGLVRRESKKWLSLPESES*DDFYHC
Trigger: GCAATGATAGAAATCATCCCAAGATTCGCTCTCTGG...TAGCGACAGCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp GTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACGATCCTTCTCCAGGAAGAACACTaGCATAAATGGCCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: VSSPKQDYQFLKAGNTILLQEEH*HKWPAQ
Trigger: CTGCGCAGGCCATTTATGCCAGTGTTCTTCCTGGAG...AAGGATCGTATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTATTGACAGAGGACAGTaGAGGACCCAAGCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTAIDRGQ*RTQAVL
Trigger: TAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAAT...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTTTCACAGCAGAGACGTaGTCAACACACACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTAFTAET*STHTEG
Trigger: TCCCTCTGTGTGTGTTGACCACGTCTCTGCTGTGAA...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGTCTTCCATTCTCTTTTaGTTTAGAGGCCGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: AAKPHNRPLHEILFTAETSSILF*FRGRLL
Trigger: AAGAAGGCGGCCTCTAAATCAAAAGAGAATGGAAGA...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGAGAGGCTGCTCCATTTaGATAAAAGCCTTTGATGCT +
Preference number: 4 (lower is better)
Translates to: AAKPHNRPLHEILFTAETRGCSI*IKAFDA
Trigger: AGCATCAAAGGCTTTTATTCAAATGGAGCAGCCTCT...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGCAAATGGGCCCATTTTaGTATCCTTTTTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: AAKPHNRPLHEILFTAETQMGPF*YPFWLC
Trigger: ACAGAGCCAAAAAGGATATCAAAATGGGCCCATTTG...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp CAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGTTGTTAACTAAAATCTaGCTCCAAAGCCCAGGTGTA +
Preference number: 4 (lower is better)
Translates to: QPGSYWSEPDGLRLQKDKLLTKI*LQSPGV
Trigger: TACACCTGGGCTTTGGAGTCAGATTTTAGTTAACAA...CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp CTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCAGTCCTATCAACCTCTAGGTAGCACAGACCTCTaGGCATTTACCAACAAGATT +
Preference number: 4 (lower is better)
Translates to: LTRLTEDSGGPKQSYQPLGSTDL*AFTNKI
Trigger: AATCTTGTTGGTAAATGCTCAGAGGTCTGTGCTACC...TAGAGGTTGATAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp GTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACGATCCTTTCATCTTCATGCAACTaGCTCTCCAGCTCCGCATCT +
Preference number: 4 (lower is better)
Translates to: VSSPKQDYQFLKAGNTILSSSCN*LSSSAS
Trigger: AGATGCGGAGCTGGAGAGGCAGTTGCATGAAGATGA...AAGGATCGTATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGCCACTTTGTTTTCACTaGTGTCATCAGCCAAATTCC +
Preference number: 4 (lower is better)
Translates to: AAKPHNRPLHEILFTAETPLCFH*CHQPNS
Trigger: GGAATTTGGCTGATGACAGCAGTGAAAACAAAGTGG...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATAAAGCTGTGGTGGTTTTaGCAACACCAGGAGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIKLWWF*QHQEGL
Trigger: CAGGCCCTCCTGGTGTTGGCAAAACCACCACAGCTT...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTCCTATCCTCATTGCCTaGCATGCCATCTACTTCATC +
Preference number: 4 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTAPILIA*HAIYFI
Trigger: GATGAAGTAGATGGCATGGCAGGCAATGAGGATAGG...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTTGCTGTCTGCTGCTCTaGTTAAAAGCATCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTACCLLL*LKASGA
Trigger: AGCACCTGATGCTTTTAAGCAGAGCAGCAGACAGCA...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp GTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACGATCCTTAGCTCTTGTGAAGGCTaGTTTCACCTTGGGATCCAG +
Preference number: 4 (lower is better)
Translates to: VSSPKQDYQFLKAGNTILSSCEG*FHLGIQ
Trigger: CTGGATCCCAAGGTGAAAGCAGCCTTCACAAGAGCT...AAGGATCGTATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTTTGTTGGCACAGCTCTaGTCACCTTGCTGTCCAATT +
Preference number: 4 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTALLAQL*SPCCPI
Trigger: AATTGGACAGCAAGGTGACCAGAGCTGTGCCAACAA...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATAGCCAGCTTGGGAAGGTaGGAAACTGGGTCATGTACC +
Preference number: 4 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIASLGR*ETGSCT
Trigger: GGTACATGACCCAGTTTCCCACCTTCCCAAGCTGGC...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTAGGCTGCTTTCACCTTaGGATCCAGCTTTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTARLLSP*DPALKR
Trigger: CCTTTTCAAAGCTGGATCCCAAGGTGAAAGCAGCCT...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp CATATGGCCGTCAATATCATGGCCTGTTTTCTTGCTGTTTGGCTCTTCGACTACAGGCTGCTTTCACCTTaGGATCCAGCTTTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: HMAVNIMACFLAVWLFDYRLLSP*DPALKR
Trigger: CCTTTTCAAAGCTGGATCCCAAGGTGAAAGCAGCCT...GTAGTCGAAGAGCCAAACAGCAAGAAAACAGGCCATGATATTGACGGCCATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514572.1
CDS-3UTR CCA 90 bp GTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACGATCCTTTTCCGAATCCAGGGATaGGCTTGTGCTGTGTCTAGA +
Preference number: 4 (lower is better)
Translates to: VSSPKQDYQFLKAGNTILFRIQG*ACAVSR
Trigger: TCTAGACACAGCACAAGCCCATCCCTGGATTCGGAA...AAGGATCGTATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp TTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCTGTCGCTAAGGGAGAGTAAAAAGTaGCTGTCGCTAGTGAAAAAT +
Preference number: 4 (lower is better)
Translates to: FSRPAGLVRRESKKWLSLRESKK*LSLVKN
Trigger: ATTTTTCACTAGCGACAGCCACTTTTTACTCTCCCT...TAGCGACAGCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp GTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACGATCCTTCTAGACCAGCTGGACTaGTCAGGAGGGAGAGTAAAA +
Preference number: 4 (lower is better)
Translates to: VSSPKQDYQFLKAGNTILLDQLD*SGGRVK
Trigger: TTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAG...AAGGATCGTATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp CTCCTCGACTGCCAATGTTATGTTTCACACAACAGGTTAGTAAGGAATACAGTGCAGCCTGGTTCCTACTaGTCTGAACCTGATGGGTTG +
Preference number: 4 (lower is better)
Translates to: LLDCQCYVSHNRLVRNTVQPGSY*SEPDGL
Trigger: CAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG...CACTGTATTCCTTACTAACCTGTTGTGTGAAACATAACATTGGCAGTCGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp ACAAGGCTTTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCGACTTGGAATGTTGCTaGGATTCTTTTGAACTTTCA +
Preference number: 4 (lower is better)
Translates to: TRLSLDQLDWSGGRVKSGDLECC*DSFELS
Trigger: TGAAAGTTCAAAAGAATCTCAGCAACATTCCAAGTC...GCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAAAGCCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp TTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCTGTCGCTATTGAATAAAAGCCTTTaGTGCTGGTATTGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: FSRPAGLVRRESKKWLSLLNKSL*CWYCSV
Trigger: CACTGAACAATACCAGCATCAAAGGCTTTTATTCAA...TAGCGACAGCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp CAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGTTGAATAAAAGCCTTTaGTGCTGGTATTGTTCAGTG +
Preference number: 4 (lower is better)
Translates to: QPGSYWSEPDGLRLQKDKLNKSL*CWYCSV
Trigger: CACTGAACAATACCAGCATCAAAGGCTTTTATTCAA...CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATATGGGAATCCGAGTTCTaGCTCCTCGACTGCCAATGT +
Preference number: 4 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIWESEF*LLDCQC
Trigger: ACATTGGCAGTCGAGGAGTCAGAACTCGGATTCCCA...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp TTTGAAAGATATCTGACAATGTACAAAGAATACCCAGTTCTAGGTGGTGACTGTCACACACAGAGGGAGTaGGGCTGGGAATCCGAGTTC +
Preference number: 4 (lower is better)
Translates to: FERYLTMYKEYPVLGGDCHTQRE*GWESEF
Trigger: GAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTG...ACAGTCACCACCTAGAACTGGGTATTCTTTGTACATTGTCAGATATCTTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp CTCCTCGACTGCCAATGTTATGTTTCACACAACAGGTTAGTAAGGAATACAGTGGGTCACCATCGCATATaGTGTCTGCTGCTCTGCTTA +
Preference number: 4 (lower is better)
Translates to: LLDCQCYVSHNRLVRNTVGHHRI*CLLLCL
Trigger: TAAGCAGAGCAGCAGACAGCATATGCGATGGTGACC...CACTGTATTCCTTACTAACCTGTTGTGTGAAACATAACATTGGCAGTCGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp TGGCCGTCAATATCATGGCCTGTTTTCTTGCTGTTTGGCTCTTCGACTACCATACATGGCCTGTTTTCTTaGTGTTTGGCTCTTCGACTA +
Preference number: 4 (lower is better)
Translates to: WPSISWPVFLLFGSSTTIHGLFS*CLALRL
Trigger: TAGTCGAAGAGCCAAACAGCAAGAAAACAGGCCATG...TATGGTAGTCGAAGAGCCAAACAGCAAGAAAACAGGCCATGATATTGACGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514572.1
CDS-3UTR CCA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTGAGCCTTTTTGGTCTTaGGTTCTTCATCCAACATGG +
Preference number: 4 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTAEPFWS*VLHPTW
Trigger: CCATGTTGGATGAAGAACCCAAGACCAAAAAGGCTC...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp CTCCTCGACTGCCAATGTTATGTTTCACACAACAGGTTAGTAAGGAATACAGTGTGGAGCCCAGAGCCTTaGGACCTTCTCGATTTAAGT +
Preference number: 4 (lower is better)
Translates to: LLDCQCYVSHNRLVRNTVWSPEP*DLLDLS
Trigger: ACTTAAATCGAGAAGGTCCCAAGGCTCTGGGCTCCA...CACTGTATTCCTTACTAACCTGTTGTGTGAAACATAACATTGGCAGTCGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp CTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCAGTCCTATCAACCTCTACTTGGATTTCTTGCCTaGCATAGTCCGAATCAGATT +
Preference number: 4 (lower is better)
Translates to: LTRLTEDSGGPKQSYQPLLGFLA*HSPNQI
Trigger: AATCTGATTCGGACTATGCCAGGCAAGAAATCCAAG...TAGAGGTTGATAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTGGTCTTGAGCGAGGTTaGCTTATATTTATCCACCCA +
Preference number: 4 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTAGLERG*LIFIHP
Trigger: TGGGTGGATAAATATAAGCCAACCTCGCTCAAGACC...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR CAA 72 bp CAATTCTACAGTCATTCAGAAGCACGTCTAACTAGATaGACAGAGGACAGTGGAGGACCCAAGCAGTCCTAT +
Preference number: 4 (lower is better)
Translates to: QFYSHSEARLTR*TEDSGGPKQSY
Trigger: ATAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAGACGTGCTTCTGAATGACTGTAGAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACAGCCACCTGCTCCTTaGAATCCAGGCTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIQPPAP*NPGFSK
Trigger: TTTGGAAAAGCCTGGATTTCAAGGAGCAGGTGGCTG...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGACCTGTCTGATATCTTaGTTGGCTCCCAAAATTATT +
Preference number: 4 (lower is better)
Translates to: AAKPHNRPLHEILFTAETTCLIS*LAPKII
Trigger: AATAATTTTGGGAGCCAATCAAGATATCAGACAGGT...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp TCAATATCATGGCCTGTTTTCTTGCTGTTTGGCTCTTCGACTACCATAAGAAACCTTGGGATCCAGCTTTaGAAAGGGACTAGGTTTGCC +
Preference number: 4 (lower is better)
Translates to: SISWPVFLLFGSSTTIRNLGIQL*KGTRFA
Trigger: GGCAAACCTAGTCCCTTTTCAAAGCTGGATCCCAAG...GTTTCTTATGGTAGTCGAAGAGCCAAACAGCAAGAAAACAGGCCATGATATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514572.1
CDS-3UTR TCA 90 bp TGGCCGTCAATATCATGGCCTGTTTTCTTGCTGTTTGGCTCTTCGACTACCATAGATGCCTTTATAGCTTaGAGTGAGTATGGAGTAAGG +
Preference number: 4 (lower is better)
Translates to: WPSISWPVFLLFGSSTTIDAFIA*SEYGVR
Trigger: CCTTACTCCATACTCACTTCAAGCTATAAAGGCATC...TATGGTAGTCGAAGAGCCAAACAGCAAGAAAACAGGCCATGATATTGACGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514572.1
CDS-3UTR TCA 90 bp CTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCAGTCCTATCAACCTCTATTGTTAACTAAAATCTaGCTCCAAAGCCCAGGTGTA +
Preference number: 4 (lower is better)
Translates to: LTRLTEDSGGPKQSYQPLLLTKI*LQSPGV
Trigger: TACACCTGGGCTTTGGAGTCAGATTTTAGTTAACAA...TAGAGGTTGATAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp TTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCTGTCGCTACTCTTTTCTTTTGCTTaGCACCATCTTCTTATTAGA +
Preference number: 4 (lower is better)
Translates to: FSRPAGLVRRESKKWLSLLFSFA*HHLLIR
Trigger: TCTAATAAGAAGATGGTGGCAAGCAAAAGAAAAGAG...TAGCGACAGCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp TTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCTGTCGCTATTTTCTTTTCATAATTaGCAGCTTAGAACTGGCCTT +
Preference number: 4 (lower is better)
Translates to: FSRPAGLVRRESKKWLSLFSFHN*QLRTGL
Trigger: AAGGCCAGTTCTAAGCTGGCAATTATGAAAAGAAAA...TAGCGACAGCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACAATCGCCTTCAAACTaGTCTTACTCCGGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIQSPSN*SYSGCH
Trigger: GTGACACCCGGAGTAAGAGCAGTTTGAAGGCGATTG...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp AGTCATTCAGAAGCACGTCTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGATATGTGTCCATAAGTaGAACAACATCCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: SHSEARLTRLTEDSGGPKICVHK*NNILYS
Trigger: GGAGTACAGGATGTTGTTGCACTTATGGACACATAT...CTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAGACGTGCTTCTGAATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp AGTCATTCAGAAGCACGTCTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGGTAATTGCTTGGCGATaGCTTCATCATTTAATCCAG +
Preference number: 4 (lower is better)
Translates to: SHSEARLTRLTEDSGGPKVIAWR*LHHLIQ
Trigger: CTGGATTAAATGATGAAGCCATCGCCAAGCAATTAC...CTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAGACGTGCTTCTGAATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACCTTTGGTATTTCTTTaGAGCCCAGAGCCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIPLVFL*SPEPWD
Trigger: GTCCCAAGGCTCTGGGCTCCAAAGAAATACCAAAGG...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATAAGCGTAGGAGTTTGTTaGCACAGCTCTGGTCACCTT +
Preference number: 4 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGISVGVC*HSSGHL
Trigger: AAGGTGACCAGAGCTGTGCCAACAAACTCCTACGCT...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp TCAATATCATGGCCTGTTTTCTTGCTGTTTGGCTCTTCGACTACCATAAGAAACTTCCGAATCCAGGGATaGGCTTGTGCTGTGTCTAGA +
Preference number: 4 (lower is better)
Translates to: SISWPVFLLFGSSTTIRNFRIQG*ACAVSR
Trigger: TCTAGACACAGCACAAGCCCATCCCTGGATTCGGAA...GTTTCTTATGGTAGTCGAAGAGCCAAACAGCAAGAAAACAGGCCATGATATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514572.1
CDS-3UTR TCA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTGAGCGAATCTTGGGATaGTTTCTATCATTGCACATA +
Preference number: 4 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTAERILG*FLSLHI
Trigger: TATGTGCAATGATAGAAATCATCCCAAGATTCGCTC...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp AGTCATTCAGAAGCACGTCTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGACCTGTCTGATATCTTaGTTGGCTCCCAAAATTATT +
Preference number: 4 (lower is better)
Translates to: SHSEARLTRLTEDSGGPKTCLIS*LAPKII
Trigger: AATAATTTTGGGAGCCAATCAAGATATCAGACAGGT...CTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAGACGTGCTTCTGAATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTTATGTAAAACCTGTCTaGTATCTTGATTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTAYVKPV*YLDWLP
Trigger: TGGGAGCCAATCAAGATATCAGACAGGTTTTACATA...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACTGAACCTGATGGGTTaGGACTCCAGAAGGATAAGA +
Preference number: 4 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGILNLMG*DSRRIR
Trigger: TCTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAG...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGTTTTCTTTTCATAATTaGCAGCTTAGAACTGGCCTT +
Preference number: 4 (lower is better)
Translates to: AAKPHNRPLHEILFTAETFSFHN*QLRTGL
Trigger: AAGGCCAGTTCTAAGCTGGCAATTATGAAAAGAAAA...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp TACAGTTTAAATGTCTCAAGAACTTTGTCTCATCACCCAAACAAGACTACCAGTAGTCTCCTCTCCAGCTaGAAACACTTTCCGGGCAAC +
Preference number: 4 (lower is better)
Translates to: YSLNVSRTLSHHPNKTTSSLLSS*KHFPGN
Trigger: GTTGCCCGGAAAGTGTTTGCAGCTGGAGAGGAGACT...ACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp TACAGTTTAAATGTCTCAAGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTTTCATGTCACCCCCTaGTGCTACAGGCTTCACGTG +
Preference number: 4 (lower is better)
Translates to: YSLNVSRTLSHHPNKTTSFHVTP*CYRLHV
Trigger: CACGTGAAGCCTGTAGCAGCAGGGGGTGACATGAAA...ACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATAAGAAGACTCCAGTTTTaGTTACTCCGGATCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIRRLQF*LLRIWL
Trigger: CAGCCAGATCCGGAGTAAGCAAAACTGGAGTCTTCT...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp TACAGTTTAAATGTCTCAAGAACTTTGTCTCATCACCCAAACAAGACTACCAGTACTTCTCCCGCGAAGTaGAAGAAGGCGAAGACAGTG +
Preference number: 4 (lower is better)
Translates to: YSLNVSRTLSHHPNKTTSTSPAK*KKAKTV
Trigger: CACTGTCTTCGCCTTCTTGCACTTCGCGGGAGAAGT...ACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381897.5
CDS-3UTR CCA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTAGGTTTAGAAGATACTaGCAGTTTTTCTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTARFRRY*QFFWWL
Trigger: AAGCCACCAGAAAAACTGCCAGTATCTTCTAAACCT...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp CTCCTCGACTGCCAATGTTATGTTTCACACAACAGGTTAGTAAGGAATACAGTGGAGCCTTTTTGGTCTTaGGTTCTTCATCCAACATGG +
Preference number: 4 (lower is better)
Translates to: LLDCQCYVSHNRLVRNTVEPFWS*VLHPTW
Trigger: CCATGTTGGATGAAGAACCCAAGACCAAAAAGGCTC...CACTGTATTCCTTACTAACCTGTTGTGTGAAACATAACATTGGCAGTCGAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACCAAACTGTCCCTTTTaGAAGTCGGCCTGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIPNCPF*KSACSF
Trigger: AAAAGAGCAGGCCGACTTCCAAAAGGGACAGTTTGG...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp CTCCTCGACTGCCAATGTTATGTTTCACACAACAGGTTAGTAAGGAATACAGTGGGTCTTGAGCGAGGTTaGCTTATATTTATCCACCCA +
Preference number: 4 (lower is better)
Translates to: LLDCQCYVSHNRLVRNTVGLERG*LIFIHP
Trigger: TGGGTGGATAAATATAAGCCAACCTCGCTCAAGACC...CACTGTATTCCTTACTAACCTGTTGTGTGAAACATAACATTGGCAGTCGAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp TTTGAAAGATATCTGACAATGTACAAAGAATACCCAGTTCTAGGTGGTGACTGTCTCCAGGAAGAACACTaGCATAAATGGCCTGCGCAG +
Preference number: 4 (lower is better)
Translates to: FERYLTMYKEYPVLGGDCLQEEH*HKWPAQ
Trigger: CTGCGCAGGCCATTTATGCCAGTGTTCTTCCTGGAG...ACAGTCACCACCTAGAACTGGGTATTCTTTGTACATTGTCAGATATCTTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp TGGCCGTCAATATCATGGCCTGTTTTCTTGCTGTTTGGCTCTTCGACTACCATATGTTTTCTTGCTGTTTaGCTCTTCGACTACCATAAG +
Preference number: 4 (lower is better)
Translates to: WPSISWPVFLLFGSSTTICFLAV*LFDYHK
Trigger: CTTATGGTAGTCGAAGAGCCAAACAGCAAGAAAACA...TATGGTAGTCGAAGAGCCAAACAGCAAGAAAACAGGCCATGATATTGACGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514572.1
CDS-3UTR TCA 90 bp CTCCTCGACTGCCAATGTTATGTTTCACACAACAGGTTAGTAAGGAATACAGTGGTCCAATTATGGTCTTaGGCGAGGTTGGCTTATATT +
Preference number: 4 (lower is better)
Translates to: LLDCQCYVSHNRLVRNTVVQLWS*ARLAYI
Trigger: AATATAAGCCAACCTCGCTCAAGACCATAATTGGAC...CACTGTATTCCTTACTAACCTGTTGTGTGAAACATAACATTGGCAGTCGAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp GTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACGATCCTTTATGTAAAACCTGTCTaGTATCTTGATTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: VSSPKQDYQFLKAGNTILYVKPV*YLDWLP
Trigger: TGGGAGCCAATCAAGATATCAGACAGGTTTTACATA...AAGGATCGTATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp CTCCTCGACTGCCAATGTTATGTTTCACACAACAGGTTAGTAAGGAATACAGTGCAAATGGGCCCATTTTaGTATCCTTTTTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LLDCQCYVSHNRLVRNTVQMGPF*YPFWLC
Trigger: ACAGAGCCAAAAAGGATATCAAAATGGGCCCATTTG...CACTGTATTCCTTACTAACCTGTTGTGTGAAACATAACATTGGCAGTCGAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp CTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCAGTCCTATCAACCTCTACTCTTTTCTTTTGCTTaGCACCATCTTCTTATTAGA +
Preference number: 4 (lower is better)
Translates to: LTRLTEDSGGPKQSYQPLLFSFA*HHLLIR
Trigger: TCTAATAAGAAGATGGTGGCAAGCAAAAGAAAAGAG...TAGAGGTTGATAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp TTTGAAAGATATCTGACAATGTACAAAGAATACCCAGTTCTAGGTGGTGACTGTACTCCGGGTGTCACTTaGATTCAGTTCCACGTAGCT +
Preference number: 4 (lower is better)
Translates to: FERYLTMYKEYPVLGGDCTPGVT*IQFHVA
Trigger: AGCTACGTGGAACTGAATGCAAGTGACACCCGGAGT...ACAGTCACCACCTAGAACTGGGTATTCTTTGTACATTGTCAGATATCTTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp TTTGAAAGATATCTGACAATGTACAAAGAATACCCAGTTCTAGGTGGTGACTGTTGGAGCCCAGAGCCTTaGGACCTTCTCGATTTAAGT +
Preference number: 4 (lower is better)
Translates to: FERYLTMYKEYPVLGGDCWSPEP*DLLDLS
Trigger: ACTTAAATCGAGAAGGTCCCAAGGCTCTGGGCTCCA...ACAGTCACCACCTAGAACTGGGTATTCTTTGTACATTGTCAGATATCTTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp TACAGTTTAAATGTCTCAAGAACTTTGTCTCATCACCCAAACAAGACTACCAGTCCTTTGGTATTTCTTTaGAGCCCAGAGCCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: YSLNVSRTLSHHPNKTTSPLVFL*SPEPWD
Trigger: GTCCCAAGGCTCTGGGCTCCAAAGAAATACCAAAGG...ACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACCGGGCAACATCAAATaGGCCCATTTTGATATCCTT +
Preference number: 4 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIPGNIK*AHFDIL
Trigger: AAGGATATCAAAATGGGCCCATTTGATGTTGCCCGG...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
3UTR CAA 72 bp CAGAACATATGGCCGTCAATATCATGGCCTGTTTTCTaGCTGTTTGGCTCTTCGACTACCATAAGAAACTTT +
Preference number: 4 (lower is better)
Translates to: QNIWPSISWPVF*LFGSSTTIRNF
Trigger: AAAGTTTCTTATGGTAGTCGAAGAGCCAAACAGCAAGAAAACAGGCCATGATATTGACGGCCATATGTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514572.1
CDS-3UTR TCA 90 bp CTCCTCGACTGCCAATGTTATGTTTCACACAACAGGTTAGTAAGGAATACAGTGCCCAGTTCTAGGTGGTaGCTGTTTTGTATAATCATT +
Preference number: 4 (lower is better)
Translates to: LLDCQCYVSHNRLVRNTVPSSRW*LFCIII
Trigger: AATGATTATACAAAACAGTCACCACCTAGAACTGGG...CACTGTATTCCTTACTAACCTGTTGTGTGAAACATAACATTGGCAGTCGAGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp TTTGAAAGATATCTGACAATGTACAAAGAATACCCAGTTCTAGGTGGTGACTGTCTGAACCTGATGGGTTaGGACTCCAGAAGGATAAGA +
Preference number: 4 (lower is better)
Translates to: FERYLTMYKEYPVLGGDCLNLMG*DSRRIR
Trigger: TCTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAG...ACAGTCACCACCTAGAACTGGGTATTCTTTGTACATTGTCAGATATCTTTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp TTTGAAAGATATCTGACAATGTACAAAGAATACCCAGTTCTAGGTGGTGACTGTCTCTCAGGGGCAAAGTaGACAAAAGCCAGTGTTCAT +
Preference number: 4 (lower is better)
Translates to: FERYLTMYKEYPVLGGDCLSGAK*TKASVH
Trigger: ATGAACACTGGCTTTTGTTCACTTTGCCCCTGAGAG...ACAGTCACCACCTAGAACTGGGTATTCTTTGTACATTGTCAGATATCTTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp TCAATATCATGGCCTGTTTTCTTGCTGTTTGGCTCTTCGACTACCATAAGAAACAAAGATCATCTATTTTaGGGTTCTCCTGTCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SISWPVFLLFGSSTTIRNKDHLF*GSPVCG
Trigger: GCCACAGACAGGAGAACCTCAAAATAGATGATCTTT...GTTTCTTATGGTAGTCGAAGAGCCAAACAGCAAGAAAACAGGCCATGATATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514572.1
CDS-3UTR GCA 90 bp TTTGAAAGATATCTGACAATGTACAAAGAATACCCAGTTCTAGGTGGTGACTGTCAGCTCTGGTCACCTTaGTGTCCAATTATGGTCTTG +
Preference number: 4 (lower is better)
Translates to: FERYLTMYKEYPVLGGDCQLWSP*CPIMVL
Trigger: CAAGACCATAATTGGACAGCAAGGTGACCAGAGCTG...ACAGTCACCACCTAGAACTGGGTATTCTTTGTACATTGTCAGATATCTTTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR GCA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACCCATAACAGACCACTaGATGAAATCCTATTCACAG +
Preference number: 4 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIPITDH*MKSYSQ
Trigger: CTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGG...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp TTTGAAAGATATCTGACAATGTACAAAGAATACCCAGTTCTAGGTGGTGACTGTCCAAACTGTCCCTTTTaGAAGTCGGCCTGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: FERYLTMYKEYPVLGGDCPNCPF*KSACSF
Trigger: AAAAGAGCAGGCCGACTTCCAAAAGGGACAGTTTGG...ACAGTCACCACCTAGAACTGGGTATTCTTTGTACATTGTCAGATATCTTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp TTTGAAAGATATCTGACAATGTACAAAGAATACCCAGTTCTAGGTGGTGACTGTTTGTTGGCACAGCTCTaGTCACCTTGCTGTCCAATT +
Preference number: 4 (lower is better)
Translates to: FERYLTMYKEYPVLGGDCLLAQL*SPCCPI
Trigger: AATTGGACAGCAAGGTGACCAGAGCTGTGCCAACAA...ACAGTCACCACCTAGAACTGGGTATTCTTTGTACATTGTCAGATATCTTTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTGTCGCTAGTGAAAAATaGTTTCATTTCTTCGAACTT +
Preference number: 4 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTAVASEK*FHFFEL
Trigger: AAGTTCGAAGAAATGAAACCATTTTTCACTAGCGAC...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp TTTGAAAGATATCTGACAATGTACAAAGAATACCCAGTTCTAGGTGGTGACTGTCCGGGCAACATCAAATaGGCCCATTTTGATATCCTT +
Preference number: 4 (lower is better)
Translates to: FERYLTMYKEYPVLGGDCPGNIK*AHFDIL
Trigger: AAGGATATCAAAATGGGCCCATTTGATGTTGCCCGG...ACAGTCACCACCTAGAACTGGGTATTCTTTGTACATTGTCAGATATCTTTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR TCA 90 bp TTTGAAAGATATCTGACAATGTACAAAGAATACCCAGTTCTAGGTGGTGACTGTAGAGGCTGCTCCATTTaGATAAAAGCCTTTGATGCT +
Preference number: 4 (lower is better)
Translates to: FERYLTMYKEYPVLGGDCRGCSI*IKAFDA
Trigger: AGCATCAAAGGCTTTTATTCAAATGGAGCAGCCTCT...ACAGTCACCACCTAGAACTGGGTATTCTTTGTACATTGTCAGATATCTTTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp TACAGTTTAAATGTCTCAAGAACTTTGTCTCATCACCCAAACAAGACTACCAGTATTTTCAGCTCCCTTTaGTATTTCTTTGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: YSLNVSRTLSHHPNKTTSIFSSL*YFFGAQ
Trigger: CTGGGCTCCAAAGAAATACCAAAGGGAGCTGAAAAT...ACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp TTTGAAAGATATCTGACAATGTACAAAGAATACCCAGTTCTAGGTGGTGACTGTTGTGAGAATCAGCTTTaGCCTGGTCATAGGTTAATG +
Preference number: 4 (lower is better)
Translates to: FERYLTMYKEYPVLGGDCCENQL*PGHRLM
Trigger: CATTAACCTATGACCAGGCCAAAGCTGATTCTCACA...ACAGTCACCACCTAGAACTGGGTATTCTTTGTACATTGTCAGATATCTTTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp CTCCTCGACTGCCAATGTTATGTTTCACACAACAGGTTAGTAAGGAATACAGTGGTCGCTAGTGAAAAATaGTTTCATTTCTTCGAACTT +
Preference number: 4 (lower is better)
Translates to: LLDCQCYVSHNRLVRNTVVASEK*FHFFEL
Trigger: AAGTTCGAAGAAATGAAACCATTTTTCACTAGCGAC...CACTGTATTCCTTACTAACCTGTTGTGTGAAACATAACATTGGCAGTCGAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CCA 90 bp ATGGTACTTTTTCTAACAGAACATATGGCCGTCAATATCATGGCCTGTTTTCTTTGGCCGTCAATATCATaGCCTGTTTTCTTGCTGTTT +
Preference number: 4 (lower is better)
Translates to: MVLFLTEHMAVNIMACFLWPSIS*PVFLLF
Trigger: AAACAGCAAGAAAACAGGCCATGATATTGACGGCCA...AAGAAAACAGGCCATGATATTGACGGCCATATGTTCTGTTAGAAAAAGTACCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514572.1
CDS-3UTR GCA 90 bp TTTGAAAGATATCTGACAATGTACAAAGAATACCCAGTTCTAGGTGGTGACTGTATATGTGTCCATAAGTaGAACAACATCCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: FERYLTMYKEYPVLGGDCICVHK*NNILYS
Trigger: GGAGTACAGGATGTTGTTGCACTTATGGACACATAT...ACAGTCACCACCTAGAACTGGGTATTCTTTGTACATTGTCAGATATCTTTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS CCA 90 bp GCGAGACTTCACCATCGCAGCCCCAGGATGAAGGCGCTGGCTGGCTaGCGGGTGGGCCGGTTGAGGAATCTGTTATCGAGGCTCAGGATC +
Preference number: 5 (lower is better)
Translates to: ARLHHRSPRMKALAG*RVGRLRNLLSRLRI
Trigger: GATCCTGAGCCTCGATAACAGATTCCTCAACCGGCCCACCCGCCAGCCAGCCAGCGCCTTCATCCTGGGGCTGCGATGGTGAAGTCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418436.5
CDS CCA 90 bp CAGAGCGAGACTTCACCATCGCAGCCCCAGGATGAAGGCGCTGGCTaGCTGGCGGGTGGGCCGGTTGAGGAATCTGTTATCGAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: QSETSPSQPQDEGAG*LAGGPVEESVIEAQ
Trigger: CTGAGCCTCGATAACAGATTCCTCAACCGGCCCACCCGCCAGCCAGCCAGCGCCTTCATCCTGGGGCTGCGATGGTGAAGTCTCGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000418436.5
CDS CCA 90 bp TTTCCGAATGTCCATCGCAGCCCCAGGATGAAGGCGCTGGCTGGCTaGCGGGTGGGCCGGTTGAGGAATCTGTTATCGAGGCTCAGGATC +
Preference number: 5 (lower is better)
Translates to: FPNVHRSPRMKALAG*RVGRLRNLLSRLRI
Trigger: GATCCTGAGCCTCGATAACAGATTCCTCAACCGGCCCACCCGCCAGCCAGCCAGCGCCTTCATCCTGGGGCTGCGATGGACATTCGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000503784.1
ENST00000504849.5
ENST00000512275.5
CDS CCA 90 bp AGAATTTCCGAATGTCCATCGCAGCCCCAGGATGAAGGCGCTGGCTaGCTGGCGGGTGGGCCGGTTGAGGAATCTGTTATCGAGGCTCAG +
Preference number: 5 (lower is better)
Translates to: RISECPSQPQDEGAG*LAGGPVEESVIEAQ
Trigger: CTGAGCCTCGATAACAGATTCCTCAACCGGCCCACCCGCCAGCCAGCCAGCGCCTTCATCCTGGGGCTGCGATGGACATTCGGAAATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000503784.1
ENST00000504849.5
ENST00000512275.5
CDS CCA 90 bp CCTGTAGACGAGTGCTTCCCCAGCCAGCTTGGGAAGGTGGGAAACTaGGTCATGTACCCCCTCATCAACTCTCCAGGAAGAACACTGGCA +
Preference number: 5 (lower is better)
Translates to: PVDECFPSQLGKVGN*VMYPLINSPGRTLA
Trigger: TGCCAGTGTTCTTCCTGGAGAGTTGATGAGGGGGTACATGACCCAGTTTCCCACCTTCCCAAGCTGGCTGGGGAAGCACTCGTCTACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000510783.5
CDS-3UTR CAA 90 bp AGCCTGACCCAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGCCTCCCCTATCCTCATaGCCTGCCATGCCATCTACT +
Preference number: 5 (lower is better)
Translates to: SLTQPGSYWSEPDGLRLQPPLSS*PAMPST
Trigger: AGTAGATGGCATGGCAGGCAATGAGGATAGGGGAGG...CTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTGGGTCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp ACAAGGCTTTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCGCTTCCCCAGCCAGCTaGGGAAGGTGGGAAACTGGG +
Preference number: 5 (lower is better)
Translates to: TRLSLDQLDWSGGRVKSGASPAS*GRWETG
Trigger: CCCAGTTTCCCACCTTCCCAAGCTGGCTGGGGAAGC...GCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAAAGCCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS CCA 90 bp ATGGCCTGCGCAGGCAGAAGACTCCAGTTTTGCTTACTCCGGATCTaGCTGTCCACTAGGTCACCATCGCATATGCTGTCTGCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: MACAGRRLQFCLLRI*LSTRSPSHMLSAAL
Trigger: CAGAGCAGCAGACAGCATATGCGATGGTGACCTAGTGGACAGCCAGATCCGGAGTAAGCAAAACTGGAGTCTTCTGCCTGCGCAGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp ACAAGGCTTTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCTGGCGGGTGGGCCGGTaGAGGAATCTGTTATCGAGG +
Preference number: 5 (lower is better)
Translates to: TRLSLDQLDWSGGRVKSGWRVGR*RNLLSR
Trigger: CCTCGATAACAGATTCCTCAACCGGCCCACCCGCCA...GCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAAAGCCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GCAGAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGTTGGAGCCCAGAGCCTaGGGACCTTCTCGATTTAAG +
Preference number: 5 (lower is better)
Translates to: AETWSTHTEGVRLGIRVLLEPRA*GPSRFK
Trigger: CTTAAATCGAGAAGGTCCCAAGGCTCTGGGCTCCAA...CAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGCCTGACCCAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGGCGGCCTTATCACTCTaGGACTGTCCACTATCACGA +
Preference number: 5 (lower is better)
Translates to: SLTQPGSYWSEPDGLRLQAALSL*DCPLSR
Trigger: TCGTGATAGTGGACAGTCCAAGAGTGATAAGGCCGC...CTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTGGGTCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGCCTGACCCAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGTTCGGAAGAACTCTTTaGCCAGTTTCGGAGCCAGCG +
Preference number: 5 (lower is better)
Translates to: SLTQPGSYWSEPDGLRLQFGRTL*PVSEPA
Trigger: CGCTGGCTCCGAAACTGGCAAAAGAGTTCTTCCGAA...CTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTGGGTCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GCAGAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGGAAAAGGGACTAGGTTaGCCACCCCAGCTGCTGATT +
Preference number: 5 (lower is better)
Translates to: AETWSTHTEGVRLGIRVLEKGLG*PPQLLI
Trigger: AATCAGCAGCTGGGGTGGCAAACCTAGTCCCTTTTC...CAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGCCTGACCCAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGGCACGTCTAACTAGATaGACAGAGGACAGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: SLTQPGSYWSEPDGLRLQARLTR*TEDSGG
Trigger: TCCTCCACTGTCCTCTGTCAATCTAGTTAGACGTGC...CTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTGGGTCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS CCA 90 bp AATACGATCATGTTTGCCTGTAGACGAGTGCTTCCCCAGCCAGCTTaGGAAGGTGGGAAACTGGGTCATGTACCCCCTCATCAACTCTCC +
Preference number: 5 (lower is better)
Translates to: NTIMFACRRVLPQPA*EGGKLGHVPPHQLS
Trigger: GGAGAGTTGATGAGGGGGTACATGACCCAGTTTCCCACCTTCCCAAGCTGGCTGGGGAAGCACTCGTCTACAGGCAAACATGATCGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000510783.5
CDS-3UTR CAA 90 bp GCAGAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACAGCTCTGGTCACCTaGCTGTCCAATTATGGTCTT +
Preference number: 5 (lower is better)
Translates to: AETWSTHTEGVRLGIRVLTALVT*LSNYGL
Trigger: AAGACCATAATTGGACAGCAAGGTGACCAGAGCTGT...CAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp TTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCTGTCGCTACAGCGTAGGAGTTTGTaGGCACAGCTCTGGTCACCT +
Preference number: 5 (lower is better)
Translates to: FSRPAGLVRRESKKWLSLQRRSL*AQLWSP
Trigger: AGGTGACCAGAGCTGTGCCAACAAACTCCTACGCTG...TAGCGACAGCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGCAGCGTAGGAGTTTGTaGGCACAGCTCTGGTCACCT +
Preference number: 5 (lower is better)
Translates to: QPGSYWSEPDGLRLQKDKQRRSL*AQLWSP
Trigger: AGGTGACCAGAGCTGTGCCAACAAACTCCTACGCTG...CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGAGCCAGCGTAGGAGTTaGTTGGCACAGCTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: QPGSYWSEPDGLRLQKDKSQRRS*LAQLWS
Trigger: TGACCAGAGCTGTGCCAACAAACTCCTACGCTGGCT...CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGCCTCCCCTATCCTCATaGCCTGCCATGCCATCTACT +
Preference number: 5 (lower is better)
Translates to: QPGSYWSEPDGLRLQKDKPPLSS*PAMPST
Trigger: AGTAGATGGCATGGCAGGCAATGAGGATAGGGGAGG...CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GCAGAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGAAGGCTGCTTTCACCTaGGGATCCAGCTTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: AETWSTHTEGVRLGIRVLKAAFT*GSSFEK
Trigger: CTTTTCAAAGCTGGATCCCAAGGTGAAAGCAGCCTT...CAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACTTCCTTTCGAGCCTTTTaGGTCTTGGGTTCTTCATCC +
Preference number: 5 (lower is better)
Translates to: ETWSTHTEGVRLGIRVLTSFRAF*VLGSSS
Trigger: GGATGAAGAACCCAAGACCAAAAAGGCTCGAAAGGA...AGTCAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GCAGAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGTCATACTTGGATTTCTaGCCTGGCATAGTCCGAATC +
Preference number: 5 (lower is better)
Translates to: AETWSTHTEGVRLGIRVLSYLDF*PGIVRI
Trigger: GATTCGGACTATGCCAGGCAAGAAATCCAAGTATGA...CAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCAGTCCTATCAACCTCTACCTTGCTGTCACCACTaGTCTCCTCAGCCACCTGCT +
Preference number: 5 (lower is better)
Translates to: LTRLTEDSGGPKQSYQPLPCCHH*SPQPPA
Trigger: AGCAGGTGGCTGAGGAGACAAGTGGTGACAGCAAGG...TAGAGGTTGATAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCAGTCCTATCAACCTCTAGAAGCTGTGGTGGTTTaGCCAACACCAGGAGGGCCT +
Preference number: 5 (lower is better)
Translates to: LTRLTEDSGGPKQSYQPLEAVVV*PTPGGP
Trigger: AGGCCCTCCTGGTGTTGGCAAAACCACCACAGCTTC...TAGAGGTTGATAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS CCA 90 bp TTTTGCCAGTTTCGGAGCCAGCGTAGGAGTTTGTTGGCACAGCTCTaGTCACCTTGCTGTCCAATTATGGTCTTGAGCGAGGTTGGCTTA +
Preference number: 5 (lower is better)
Translates to: FCQFRSQRRSLLAQL*SPCCPIMVLSEVGL
Trigger: TAAGCCAACCTCGCTCAAGACCATAATTGGACAGCAAGGTGACCAGAGCTGTGCCAACAAACTCCTACGCTGGCTCCGAAACTGGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000502706.1
CDS-3UTR CAA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGCCCTTTGGTATTTCTTaGGAGCCCAGAGCCTTGGGA +
Preference number: 5 (lower is better)
Translates to: AAKPHNRPLHEILFTAETPFGIS*EPRALG
Trigger: TCCCAAGGCTCTGGGCTCCAAAGAAATACCAAAGGG...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGTCAGCCACCTGCTCCTaGAAATCCAGGCTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: QPGSYWSEPDGLRLQKDKSATCS*KSRLFQ
Trigger: TTGGAAAAGCCTGGATTTCAAGGAGCAGGTGGCTGA...CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTGAAGCTGTGGTGGTTTaGCCAACACCAGGAGGGCCT +
Preference number: 5 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTAEAVVV*PTPGGP
Trigger: AGGCCCTCCTGGTGTTGGCAAAACCACCACAGCTTC...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGCAGAAGACTCCAGTTTaGCTTACTCCGGATCTGGCT +
Preference number: 5 (lower is better)
Translates to: QPGSYWSEPDGLRLQKDKQKTPV*LTPDLA
Trigger: AGCCAGATCCGGAGTAAGCAAAACTGGAGTCTTCTG...CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGGAAAAGGGACTAGGTTaGCCACCCCAGCTGCTGATT +
Preference number: 5 (lower is better)
Translates to: AAKPHNRPLHEILFTAETEKGLG*PPQLLI
Trigger: AATCAGCAGCTGGGGTGGCAAACCTAGTCCCTTTTC...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGCCTGACCCAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGGAAAGCTCTTTTCTTTaGCTTGCCACCATCTTCTTA +
Preference number: 5 (lower is better)
Translates to: SLTQPGSYWSEPDGLRLQESSFL*LATIFL
Trigger: TAAGAAGATGGTGGCAAGCAAAAGAAAAGAGCTTTC...CTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTGGGTCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACTAATTTTCAGCTCCCTTaGGTATTTCTTTGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: ETWSTHTEGVRLGIRVLTNFQLP*VFLWSP
Trigger: TGGGCTCCAAAGAAATACCAAAGGGAGCTGAAAATT...AGTCAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACTTGTCCAATTATGGTCTaGAGCGAGGTTGGCTTATAT +
Preference number: 5 (lower is better)
Translates to: ETWSTHTEGVRLGIRVLTCPIMV*SEVGLY
Trigger: ATATAAGCCAACCTCGCTCAAGACCATAATTGGACA...AGTCAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCAGTCCTATCAACCTCTATTCGGAAGAACTCTTTaGCCAGTTTCGGAGCCAGCG +
Preference number: 5 (lower is better)
Translates to: LTRLTEDSGGPKQSYQPLFGRTL*PVSEPA
Trigger: CGCTGGCTCCGAAACTGGCAAAAGAGTTCTTCCGAA...TAGAGGTTGATAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACTCTAGAGCCATCATCTTaGCCGGAAAATTTACCAAAC +
Preference number: 5 (lower is better)
Translates to: ETWSTHTEGVRLGIRVLTLEPSS*PENLPN
Trigger: GTTTGGTAAATTTTCCGGCAAAGATGATGGCTCTAG...AGTCAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGTCATTCAGAAGCACGTCTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGTACTCCGGGTGTCACTaGCATTCAGTTCCACGTAGC +
Preference number: 5 (lower is better)
Translates to: SHSEARLTRLTEDSGGPKYSGCH*HSVPRS
Trigger: GCTACGTGGAACTGAATGCAAGTGACACCCGGAGTA...CTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAGACGTGCTTCTGAATGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGTCTGAACCTGATGGGTaGAGACTCCAGAAGGATAAG +
Preference number: 5 (lower is better)
Translates to: QPGSYWSEPDGLRLQKDKSEPDG*RLQKDK
Trigger: CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGA...CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS GCA 90 bp TTTCGGAGCCAGCGTAGGAGTTTGTTGGCACAGCTCTGGTCACCTTaGTGTCCAATTATGGTCTTGAGCGAGGTTGGCTTATATTTATCC +
Preference number: 5 (lower is better)
Translates to: FRSQRRSLLAQLWSP*CPIMVLSEVGLYLS
Trigger: GGATAAATATAAGCCAACCTCGCTCAAGACCATAATTGGACAGCAAGGTGACCAGAGCTGTGCCAACAAACTCCTACGCTGGCTCCGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000502706.1
CDS-3UTR CAA 90 bp GCAGAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGATGATCCTCTTTTTCTaGCTTGGTTGCTTTTGTTTG +
Preference number: 5 (lower is better)
Translates to: AETWSTHTEGVRLGIRVLMILFF*LGCFCL
Trigger: CAAACAAAAGCAACCAAGCAAGAAAAAGAGGATCAT...CAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGCCTGACCCAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGGTAGCTTCGATAAGCTaGATAATTAGTGCGTTTCTT +
Preference number: 5 (lower is better)
Translates to: SLTQPGSYWSEPDGLRLQVASIS*IISAFL
Trigger: AAGAAACGCACTAATTATCAAGCTTATCGAAGCTAC...CTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTGGGTCAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CTCCTCGACTGCCAATGTTATGTTTCACACAACAGGTTAGTAAGGAATACAGTGCCTTGCTGTCACCACTaGTCTCCTCAGCCACCTGCT +
Preference number: 5 (lower is better)
Translates to: LLDCQCYVSHNRLVRNTVPCCHH*SPQPPA
Trigger: AGCAGGTGGCTGAGGAGACAAGTGGTGACAGCAAGG...CACTGTATTCCTTACTAACCTGTTGTGTGAAACATAACATTGGCAGTCGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CAGAACATATGGCCGTCAATATCATGGCCTGTTTTCTTGCTGTTTGGCTCTTCGGAAAAGGGACTAGGTTaGCCACCCCAGCTGCTGATT +
Preference number: 5 (lower is better)
Translates to: QNIWPSISWPVFLLFGSSEKGLG*PPQLLI
Trigger: AATCAGCAGCTGGGGTGGCAAACCTAGTCCCTTTTC...CGAAGAGCCAAACAGCAAGAAAACAGGCCATGATATTGACGGCCATATGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514572.1
CDS-3UTR CAA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGAAGGCTGCTTTCACCTaGGGATCCAGCTTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: AAKPHNRPLHEILFTAETKAAFT*GSSFEK
Trigger: CTTTTCAAAGCTGGATCCCAAGGTGAAAGCAGCCTT...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp TTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCTGTCGCTAAAGCCAGTGTTCATTTaGTCCCCCACCATAGTGAAA +
Preference number: 5 (lower is better)
Translates to: FSRPAGLVRRESKKWLSLKPVFI*SPTIVK
Trigger: TTTCACTATGGTGGGGGACAAAATGAACACTGGCTT...TAGCGACAGCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GAGACGTGGTCAACACACACAGAGGGAGTGAGGCTGGGAATCCGAGTTCTGACTTCTGCTTTACTTAAATaGGCTTGGACAGATGAAAAC +
Preference number: 5 (lower is better)
Translates to: ETWSTHTEGVRLGIRVLTSALLK*AWTDEN
Trigger: GTTTTCATCTGTCCAAGCCAATTTAAGTAAAGCAGA...AGTCAGAACTCGGATTCCCAGCCTCACTCCCTCTGTGTGTGTTGACCACGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp TACAGTTTAAATGTCTCAAGAACTTTGTCTCATCACCCAAACAAGACTACCAGTGCTTCCCCAGCCAGCTaGGGAAGGTGGGAAACTGGG +
Preference number: 5 (lower is better)
Translates to: YSLNVSRTLSHHPNKTTSASPAS*GRWETG
Trigger: CCCAGTTTCCCACCTTCCCAAGCTGGCTGGGGAAGC...ACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGACAATACGATCATGTTaGCCTGTAGACGAGTGCTTC +
Preference number: 5 (lower is better)
Translates to: AAKPHNRPLHEILFTAETTIRSC*PVDECF
Trigger: GAAGCACTCGTCTACAGGCAAACATGATCGTATTGT...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp TACAGTTTAAATGTCTCAAGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTGGCGGGTGGGCCGGTaGAGGAATCTGTTATCGAGG +
Preference number: 5 (lower is better)
Translates to: YSLNVSRTLSHHPNKTTSWRVGR*RNLLSR
Trigger: CCTCGATAACAGATTCCTCAACCGGCCCACCCGCCA...ACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CAGCCTGGTTCCTACTGGTCTGAACCTGATGGGTTGAGACTCCAGAAGGATAAGCTTGCTTGGTTGCTTTaGTTTGAAGTCATCCTCTTT +
Preference number: 5 (lower is better)
Translates to: QPGSYWSEPDGLRLQKDKLAWLL*FEVILF
Trigger: AAAGAGGATGACTTCAAACAAAAGCAACCAAGCAAG...CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGACCAGTAGGAACCAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGTCAAGCTGTAATTGCTaGGCGATGGCTTCATCATTT +
Preference number: 5 (lower is better)
Translates to: AAKPHNRPLHEILFTAETSSCNC*AMASSF
Trigger: AAATGATGAAGCCATCGCCAAGCAATTACAGCTTGA...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACGATCCTTAGCTTAGAACTGGCCTaGGGAGAAGAGACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: VSSPKQDYQFLKAGNTILSLELA*GEETSP
Trigger: AGGAGAAGTCTCTTCTCCCAAGGCCAGTTCTAAGCT...AAGGATCGTATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CTCCTCGACTGCCAATGTTATGTTTCACACAACAGGTTAGTAAGGAATACAGTGTTGGAGCCCAGAGCCTaGGGACCTTCTCGATTTAAG +
Preference number: 5 (lower is better)
Translates to: LLDCQCYVSHNRLVRNTVLEPRA*GPSRFK
Trigger: CTTAAATCGAGAAGGTCCCAAGGCTCTGGGCTCCAA...CACTGTATTCCTTACTAACCTGTTGTGTGAAACATAACATTGGCAGTCGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp ACAAGGCTTTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCACTGCTATTTCATACTaGGATTTCTTGCCTGGCATA +
Preference number: 5 (lower is better)
Translates to: TRLSLDQLDWSGGRVKSGTAISY*DFLPGI
Trigger: TATGCCAGGCAAGAAATCCAAGTATGAAATAGCAGT...GCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAAAGCCTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACGATCCTTTCAGCCACCTGCTCCTaGAAATCCAGGCTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: VSSPKQDYQFLKAGNTILSATCS*KSRLFQ
Trigger: TTGGAAAAGCCTGGATTTCAAGGAGCAGGTGGCTGA...AAGGATCGTATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CTCCTCGACTGCCAATGTTATGTTTCACACAACAGGTTAGTAAGGAATACAGTGGCCAAATTCCTAGCCTaGCTGTCACCACTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: LLDCQCYVSHNRLVRNTVAKFLA*LSPLVS
Trigger: GGAGACAAGTGGTGACAGCAAGGCTAGGAATTTGGC...CACTGTATTCCTTACTAACCTGTTGTGTGAAACATAACATTGGCAGTCGAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGCTAGAGCCATCATCTTaGCCGGAAAATTTACCAAAC +
Preference number: 5 (lower is better)
Translates to: AAKPHNRPLHEILFTAETLEPSS*PENLPN
Trigger: GTTTGGTAAATTTTCCGGCAAAGATGATGGCTCTAG...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGTCATTCAGAAGCACGTCTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCCTTTGATGCTGGTATaGTTCAGTGACTCAGCAACA +
Preference number: 5 (lower is better)
Translates to: SHSEARLTRLTEDSGGPKPLMLV*FSDSAT
Trigger: TGTTGCTGAGTCACTGAACAATACCAGCATCAAAGG...CTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAGACGTGCTTCTGAATGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCAGTCCTATCAACCTCTAACAATACGATCATGTTaGCCTGTAGACGAGTGCTTC +
Preference number: 5 (lower is better)
Translates to: LTRLTEDSGGPKQSYQPLTIRSC*PVDECF
Trigger: GAAGCACTCGTCTACAGGCAAACATGATCGTATTGT...TAGAGGTTGATAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS TCA 90 bp GTTTGTTGGCACAGCTCTGGTCACCTTGCTGTCCAATTATGGTCTTaGGCGAGGTTGGCTTATATTTATCCACCCAGAGCAAATTTTCCA +
Preference number: 5 (lower is better)
Translates to: VCWHSSGHLAVQLWS*ARLAYIYPPRANFP
Trigger: TGGAAAATTTGCTCTGGGTGGATAAATATAAGCCAACCTCGCTCAAGACCATAATTGGACAGCAAGGTGACCAGAGCTGTGCCAACAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000502706.1
CDS CCA 90 bp GCAACTGCCTCTCCAGCTCCGCATCTTCATCAAGCTGTAATTGCTTaGCGATGGCTTCATCATTTAATCCAGACTCATCTGTATTTTGTG +
Preference number: 5 (lower is better)
Translates to: ATASPAPHLHQAVIA*RWLHHLIQTHLYFV
Trigger: CACAAAATACAGATGAGTCTGGATTAAATGATGAAGCCATCGCCAAGCAATTACAGCTTGATGAAGATGCGGAGCTGGAGAGGCAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000418436.5
ENST00000639695.1
CDS CCA 90 bp CCACCTTTTTGGTCTTGGGTTCTTCATCCAACATGGCTAATGTTCTaGCAAACTCTTCATCTTCATGCAACTGCCTCTCCAGCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: PPFWSWVLHPTWLMF*QTLHLHATASPALF
Trigger: GAAAAGAGCTGGAGAGGCAGTTGCATGAAGATGAAGAGTTTGCCAGAACATTAGCCATGTTGGATGAAGAACCCAAGACCAAAAAGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504849.5
CDS-3UTR CAA 90 bp ACAAGGCTTTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCATGATCCTCTTTTTCTaGCTTGGTTGCTTTTGTTTG +
Preference number: 5 (lower is better)
Translates to: TRLSLDQLDWSGGRVKSGMILFF*LGCFCL
Trigger: CAAACAAAAGCAACCAAGCAAGAAAAAGAGGATCAT...GCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAAAGCCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp ACAAGGCTTTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCGTAGCTTCGATAAGCTaGATAATTAGTGCGTTTCTT +
Preference number: 5 (lower is better)
Translates to: TRLSLDQLDWSGGRVKSGVASIS*IISAFL
Trigger: AAGAAACGCACTAATTATCAAGCTTATCGAAGCTAC...GCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAAAGCCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACCCTTTGGTATTTCTTaGGAGCCCAGAGCCTTGGGA +
Preference number: 5 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIPFGIS*EPRALG
Trigger: TCCCAAGGCTCTGGGCTCCAAAGAAATACCAAAGGG...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCAGTCCTATCAACCTCTACGTTCAATTAGAGACTaGGCCTCATCTCGTTCAATA +
Preference number: 5 (lower is better)
Translates to: LTRLTEDSGGPKQSYQPLRSIRD*ASSRSI
Trigger: TATTGAACGAGATGAGGCCAAGTCTCTAATTGAACG...TAGAGGTTGATAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTTCATACTTGGATTTCTaGCCTGGCATAGTCCGAATC +
Preference number: 5 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTASYLDF*PGIVRI
Trigger: GATTCGGACTATGCCAGGCAAGAAATCCAAGTATGA...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACGATCCTTACAGCTCTGGTCACCTaGCTGTCCAATTATGGTCTT +
Preference number: 5 (lower is better)
Translates to: VSSPKQDYQFLKAGNTILTALVT*LSNYGL
Trigger: AAGACCATAATTGGACAGCAAGGTGACCAGAGCTGT...AAGGATCGTATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATATACTCCGGGTGTCACTaGCATTCAGTTCCACGTAGC +
Preference number: 5 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIYSGCH*HSVPRS
Trigger: GCTACGTGGAACTGAATGCAAGTGACACCCGGAGTA...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTCCTTTGATGCTGGTATaGTTCAGTGACTCAGCAACA +
Preference number: 5 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTAPLMLV*FSDSAT
Trigger: TGTTGCTGAGTCACTGAACAATACCAGCATCAAAGG...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp ACAAGGCTTTCTCTAGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTGGCAACCTGTCTGATATCTaGATTGGCTCCCAAAATTAT +
Preference number: 5 (lower is better)
Translates to: TRLSLDQLDWSGGRVKSGNLSDI*IGSQNY
Trigger: ATAATTTTGGGAGCCAATCAAGATATCAGACAGGTT...GCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCTAGAGAAAGCCTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGTCATTCAGAAGCACGTCTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGTCAAATGGGCCCATTTaGATATCCTTTTTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: SHSEARLTRLTEDSGGPKSNGPI*ISFLAL
Trigger: CAGAGCCAAAAAGGATATCAAAATGGGCCCATTTGA...CTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAGACGTGCTTCTGAATGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CTCCTCGACTGCCAATGTTATGTTTCACACAACAGGTTAGTAAGGAATACAGTGCAGAAGACTCCAGTTTaGCTTACTCCGGATCTGGCT +
Preference number: 5 (lower is better)
Translates to: LLDCQCYVSHNRLVRNTVQKTPV*LTPDLA
Trigger: AGCCAGATCCGGAGTAAGCAAAACTGGAGTCTTCTG...CACTGTATTCCTTACTAACCTGTTGTGTGAAACATAACATTGGCAGTCGAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACGATCCTTTCTGAACCTGATGGGTaGAGACTCCAGAAGGATAAG +
Preference number: 5 (lower is better)
Translates to: VSSPKQDYQFLKAGNTILSEPDG*RLQKDK
Trigger: CTTATCCTTCTGGAGTCTCAACCCATCAGGTTCAGA...AAGGATCGTATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS GCA 90 bp TCATGCAACTGCCTCTCCAGCTCCGCATCTTCATCAAGCTGTAATTaGTTGGCGATGGCTTCATCATTTAATCCAGACTCATCTGTATTT +
Preference number: 5 (lower is better)
Translates to: SCNCLSSSASSSSCN*LAMASSFNPDSSVF
Trigger: AAATACAGATGAGTCTGGATTAAATGATGAAGCCATCGCCAAGCAATTACAGCTTGATGAAGATGCGGAGCTGGAGAGGCAGTTGCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000418436.5
ENST00000639695.1
CDS CCA 90 bp GCCTCTCCAGCTCCGCATCTTCATCAAGCTGTAATTGCTTGGCGATaGCTTCATCATTTAATCCAGACTCATCTGTATTTTGTGAAAGCT +
Preference number: 5 (lower is better)
Translates to: ASPAPHLHQAVIAWR*LHHLIQTHLYFVKA
Trigger: AGCTTTCACAAAATACAGATGAGTCTGGATTAAATGATGAAGCCATCGCCAAGCAATTACAGCTTGATGAAGATGCGGAGCTGGAGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000418436.5
ENST00000639695.1
CDS-3UTR CAA 90 bp CTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCAGTCCTATCAACCTCTACGGGAGCTATTTACCTaGATTTCCTTTATTCCTTTC +
Preference number: 5 (lower is better)
Translates to: LTRLTEDSGGPKQSYQPLRELFT*ISFIPF
Trigger: GAAAGGAATAAAGGAAATCAAGGTAAATAGCTCCCG...TAGAGGTTGATAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CTCCTCGACTGCCAATGTTATGTTTCACACAACAGGTTAGTAAGGAATACAGTGTCCTTTCGAGCCTTTTaGGTCTTGGGTTCTTCATCC +
Preference number: 5 (lower is better)
Translates to: LLDCQCYVSHNRLVRNTVSFRAF*VLGSSS
Trigger: GGATGAAGAACCCAAGACCAAAAAGGCTCGAAAGGA...CACTGTATTCCTTACTAACCTGTTGTGTGAAACATAACATTGGCAGTCGAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGTCTGCTTTACTTAAATaGGCTTGGACAGATGAAAAC +
Preference number: 5 (lower is better)
Translates to: AAKPHNRPLHEILFTAETSALLK*AWTDEN
Trigger: GTTTTCATCTGTCCAAGCCAATTTAAGTAAAGCAGA...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATAAGCTTAGAACTGGCCTaGGGAGAAGAGACTTCTCCT +
Preference number: 5 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGISLELA*GEETSP
Trigger: AGGAGAAGTCTCTTCTCCCAAGGCCAGTTCTAAGCT...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCAGTCCTATCAACCTCTAACTGCTATTTCATACTaGGATTTCTTGCCTGGCATA +
Preference number: 5 (lower is better)
Translates to: LTRLTEDSGGPKQSYQPLTAISY*DFLPGI
Trigger: TATGCCAGGCAAGAAATCCAAGTATGAAATAGCAGT...TAGAGGTTGATAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp TTTGAAAGATATCTGACAATGTACAAAGAATACCCAGTTCTAGGTGGTGACTGTAGCCAGCGTAGGAGTTaGTTGGCACAGCTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: FERYLTMYKEYPVLGGDCSQRRS*LAQLWS
Trigger: TGACCAGAGCTGTGCCAACAAACTCCTACGCTGGCT...ACAGTCACCACCTAGAACTGGGTATTCTTTGTACATTGTCAGATATCTTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp GCTGCAAAGCCCCATAACAGACCACTGCATGAAATCCTATTCACAGCAGAGACGAACCTGTCTGATATCTaGATTGGCTCCCAAAATTAT +
Preference number: 5 (lower is better)
Translates to: AAKPHNRPLHEILFTAETNLSDI*IGSQNY
Trigger: ATAATTTTGGGAGCCAATCAAGATATCAGACAGGTT...CGTCTCTGCTGTGAATAGGATTTCATGCAGTGGTCTGTTATGGGGCTTTGCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATAGCACGTCTAACTAGATaGACAGAGGACAGTGGAGGA +
Preference number: 5 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIARLTR*TEDSGG
Trigger: TCCTCCACTGTCCTCTGTCAATCTAGTTAGACGTGC...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CAGAACATATGGCCGTCAATATCATGGCCTGTTTTCTTGCTGTTTGGCTCTTCGGAAAGATCATCTATTTaGAGGTTCTCCTGTCTGTGG +
Preference number: 5 (lower is better)
Translates to: QNIWPSISWPVFLLFGSSERSSI*RFSCLW
Trigger: CCACAGACAGGAGAACCTCAAAATAGATGATCTTTC...CGAAGAGCCAAACAGCAAGAAAACAGGCCATGATATTGACGGCCATATGTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514572.1
CDS-3UTR CAA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTCGGGAGCTATTTACCTaGATTTCCTTTATTCCTTTC +
Preference number: 5 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTARELFT*ISFIPF
Trigger: GAAAGGAATAAAGGAAATCAAGGTAAATAGCTCCCG...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CTAACTAGATTGACAGAGGACAGTGGAGGACCCAAGCAGTCCTATCAACCTCTACTTCTTATTAGATCTTaGGACACTTCCAGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: LTRLTEDSGGPKQSYQPLLLIRS*DTSSSK
Trigger: TTTGGAACTGGAAGTGTCCAAAGATCTAATAAGAAG...TAGAGGTTGATAGGACTGCTTGGGTCCTCCACTGTCCTCTGTCAATCTAGTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp TACAGTTTAAATGTCTCAAGAACTTTGTCTCATCACCCAAACAAGACTACCAGTGCGGCCTTATCACTCTaGGACTGTCCACTATCACGA +
Preference number: 5 (lower is better)
Translates to: YSLNVSRTLSHHPNKTTSAALSL*DCPLSR
Trigger: TCGTGATAGTGGACAGTCCAAGAGTGATAAGGCCGC...ACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp TACAGTTTAAATGTCTCAAGAACTTTGTCTCATCACCCAAACAAGACTACCAGTGCCAAATTCCTAGCCTaGCTGTCACCACTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: YSLNVSRTLSHHPNKTTSAKFLA*LSPLVS
Trigger: GGAGACAAGTGGTGACAGCAAGGCTAGGAATTTGGC...ACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTCTTCTTATTAGATCTTaGGACACTTCCAGTTCCAAA +
Preference number: 5 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTALLIRS*DTSSSK
Trigger: TTTGGAACTGGAAGTGTCCAAAGATCTAATAAGAAG...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp CTCCTCGACTGCCAATGTTATGTTTCACACAACAGGTTAGTAAGGAATACAGTGGAGACTTCTCCTATTTaGTCAGCTGATGACTTGGAA +
Preference number: 5 (lower is better)
Translates to: LLDCQCYVSHNRLVRNTVETSPI*SADDLE
Trigger: TTCCAAGTCATCAGCTGACAAAATAGGAGAAGTCTC...CACTGTATTCCTTACTAACCTGTTGTGTGAAACATAACATTGGCAGTCGAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGGACCCAAGCAGTCCTATCAACCTCTATAAGAGGTGTACATAAGCCTACTGCTAGTTTCTATAGCATCTaGGTCTTTCTCATCAGATTG +
Preference number: 5 (lower is better)
Translates to: RTQAVLSTSIRGVHKPTASFYSI*VFLIRL
Trigger: CAATCTGATGAGAAAGACCAAGATGCTATAGAAACT...AGCAGTAGGCTTATGTACACCTCTTATAGAGGTTGATAGGACTGCTTGGGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATAGAGACTTCTCCTATTTaGTCAGCTGATGACTTGGAA +
Preference number: 5 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIETSPI*SADDLE
Trigger: TTCCAAGTCATCAGCTGACAAAATAGGAGAAGTCTC...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACGTTCAATTAGAGACTaGGCCTCATCTCGTTCAATA +
Preference number: 5 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIRSIRD*ASSRSI
Trigger: TATTGAACGAGATGAGGCCAAGTCTCTAATTGAACG...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS CCA 90 bp TTTCTCATTCTTCTTTACTGTTTCACTTACAAGTTTCTTTCCACTTaGTATTACTCCAAAGAATTTCCGAATGTCCATCGCAGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: FLILLYCFTYKFLST*YYSKEFPNVHRSPR
Trigger: CCTGGGGCTGCGATGGACATTCGGAAATTCTTTGGAGTAATACCAAGTGGAAAGAAACTTGTAAGTGAAACAGTAAAGAAGAATGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000504849.5
ENST00000512275.5
CDS CCA 90 bp CAACTCCTCAGTTTCAACTGCTATTTCATACTTGGATTTCTTGCCTaGCATAGTCCGAATCAGATTCAACAGGCCATCTTCATCAATAAT +
Preference number: 5 (lower is better)
Translates to: QLLSFNCYFILGFLA*HSPNQIQQAIFINN
Trigger: ATTATTGATGAAGATGGCCTGTTGAATCTGATTCGGACTATGCCAGGCAAGAAATCCAAGTATGAAATAGCAGTTGAAACTGAGGAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504554.1
CDS-3UTR CAA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATAGAAAGCTCTTTTCTTTaGCTTGCCACCATCTTCTTA +
Preference number: 5 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGIESSFL*LATIFL
Trigger: TAAGAAGATGGTGGCAAGCAAAAGAAAAGAGCTTTC...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AAAAATGGTACTTTTTCTAACAGAACATATGGCCGTCAATATCATGGCCTGTTTAAGGCTGCTTTCACCTaGGGATCCAGCTTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: KNGTFSNRTYGRQYHGLFKAAFT*GSSFEK
Trigger: CTTTTCAAAGCTGGATCCCAAGGTGAAAGCAGCCTT...AAACAGGCCATGATATTGACGGCCATATGTTCTGTTAGAAAAAGTACCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000514572.1
CDS-3UTR CAA 90 bp TACAGTTTAAATGTCTCAAGAACTTTGTCTCATCACCCAAACAAGACTACCAGTAAGCCAGTGTTCATTTaGTCCCCCACCATAGTGAAA +
Preference number: 5 (lower is better)
Translates to: YSLNVSRTLSHHPNKTTSKPVFI*SPTIVK
Trigger: TTTCACTATGGTGGGGGACAAAATGAACACTGGCTT...ACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATAAATGTCTCAAGAACTTaGTCTCATCACCCAAACAAG +
Preference number: 5 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGINVSRT*SHHPNK
Trigger: CTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATT...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AAAATGGTACTTTTTCTAACAGAACATATGGCCGTCAATATCATGGCCTGTTTTTCATGGCCTGTTTTCTaGCTGTTTGGCTCTTCGACT +
Preference number: 5 (lower is better)
Translates to: KMVLFLTEHMAVNIMACFSWPVF*LFGSST
Trigger: AGTCGAAGAGCCAAACAGCAAGAAAACAGGCCATGA...AAAACAGGCCATGATATTGACGGCCATATGTTCTGTTAGAAAAAGTACCATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000514572.1
CDS TCA 90 bp TTATTCATGTTTTGGCTAGAGCCTAGAACACGCAAGTATGAACACTaGTCTGTACTGTATATTCAGAACGCAAATAGCCCAACATTATGC +
Preference number: 5 (lower is better)
Translates to: LFMFWLEPRTRKYEH*SVLYIQNANSPTLC
Trigger: GCATAATGTTGGGCTATTTGCGTTCTGAATATACAGTACAGATCAGTGTTCATACTTGCGTGTTCTAGGCTCTAGCCAAAACATGAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504849.5
CDS-3UTR CAA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATACTTTTTCTTGCTTGGTaGCTTTTGTTTGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGILFLAW*LLFEVI
Trigger: GATGACTTCAAACAAAAGCAACCAAGCAAGAAAAAG...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp TTTGAAAGATATCTGACAATGTACAAAGAATACCCAGTTCTAGGTGGTGACTGTTCAAGCTGTAATTGCTaGGCGATGGCTTCATCATTT +
Preference number: 5 (lower is better)
Translates to: FERYLTMYKEYPVLGGDCSSCNC*AMASSF
Trigger: AAATGATGAAGCCATCGCCAAGCAATTACAGCTTGA...ACAGTCACCACCTAGAACTGGGTATTCTTTGTACATTGTCAGATATCTTTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp TACAGTTTAAATGTCTCAAGAACTTTGTCTCATCACCCAAACAAGACTACCAGTAATTTTCAGCTCCCTTaGGTATTTCTTTGGAGCCCA +
Preference number: 5 (lower is better)
Translates to: YSLNVSRTLSHHPNKTTSNFQLP*VFLWSP
Trigger: TGGGCTCCAAAGAAATACCAAAGGGAGCTGAAAATT...ACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp TTTGAAAGATATCTGACAATGTACAAAGAATACCCAGTTCTAGGTGGTGACTGTTGTCCAATTATGGTCTaGAGCGAGGTTGGCTTATAT +
Preference number: 5 (lower is better)
Translates to: FERYLTMYKEYPVLGGDCCPIMV*SEVGLY
Trigger: ATATAAGCCAACCTCGCTCAAGACCATAATTGGACA...ACAGTCACCACCTAGAACTGGGTATTCTTTGTACATTGTCAGATATCTTTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp TACAGTTTAAATGTCTCAAGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCAAATGGGCCCATTTaGATATCCTTTTTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: YSLNVSRTLSHHPNKTTSSNGPI*ISFLAL
Trigger: CAGAGCCAAAAAGGATATCAAAATGGGCCCATTTGA...ACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AGAACTTTGTCTCATCACCCAAACAAGACTACCAGTTCCTTAAAGCAGGGAATAAGTTTCTATAGCATCTaGGTCTTTCTCATCAGATTG +
Preference number: 5 (lower is better)
Translates to: RTLSHHPNKTTSSLKQGISFYSI*VFLIRL
Trigger: CAATCTGATGAGAAAGACCAAGATGCTATAGAAACT...TATTCCCTGCTTTAAGGAACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp TACAGTTTAAATGTCTCAAGAACTTTGTCTCATCACCCAAACAAGACTACCAGTCTTTTTCTTGCTTGGTaGCTTTTGTTTGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: YSLNVSRTLSHHPNKTTSLFLAW*LLFEVI
Trigger: GATGACTTCAAACAAAAGCAACCAAGCAAGAAAAAG...ACTGGTAGTCTTGTTTGGGTGATGAGACAAAGTTCTTGAGACATTTAAACTGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS-3UTR CAA 90 bp AAAATGGTACTTTTTCTAACAGAACATATGGCCGTCAATATCATGGCCTGTTTTAGTTTCTATAGCATCTaGGTCTTTCTCATCAGATTG +
Preference number: 5 (lower is better)
Translates to: KMVLFLTEHMAVNIMACFSFYSI*VFLIRL
Trigger: CAATCTGATGAGAAAGACCAAGATGCTATAGAAACT...AAAACAGGCCATGATATTGACGGCCATATGTTCTGTTAGAAAAAGTACCATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000514572.1
CDS CCA 72 bp GAATGTCCATCGCAGCCCCAGGATGAAGGCGCTGGCTaGCTGGCGGGTGGGCCGGTTGAGGAATCTGTTATC +
Preference number: 6 (lower is better)
Translates to: ECPSQPQDEGAG*LAGGPVEESVI
Trigger: GATAACAGATTCCTCAACCGGCCCACCCGCCAGCCAGCCAGCGCCTTCATCCTGGGGCTGCGATGGACATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000503784.1
ENST00000504849.5
ENST00000512275.5
CDS CCA 72 bp CTTCTGTGTCCTTTCGAGCCTGTAGTCCCAGCTACTTaGGGGGCTGCGGTGAGGGGATCAATCAAGCCCAAG +
Preference number: 6 (lower is better)
Translates to: LLCPFEPVVPAT*GAAVRGSIKPK
Trigger: CTTGGGCTTGATTGATCCCCTCACCGCAGCCCCCCAAGTAGCTGGGACTACAGGCTCGAAAGGACACAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000512881.5
CDS CCA 72 bp GAGTGCTTCCCCAGCCAGCTTGGGAAGGTGGGAAACTaGGTCATGTACCCCCTCATCAACTCTCCAGGAAGA +
Preference number: 6 (lower is better)
Translates to: ECFPSQLGKVGN*VMYPLINSPGR
Trigger: TCTTCCTGGAGAGTTGATGAGGGGGTACATGACCCAGTTTCCCACCTTCCCAAGCTGGCTGGGGAAGCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000510783.5
CDS CCA 72 bp ATGTTTGCCTGTAGACGAGTGCTTCCCCAGCCAGCTTaGGAAGGTGGGAAACTGGGTCATGTACCCCCTCAT +
Preference number: 6 (lower is better)
Translates to: MFACRRVLPQPA*EGGKLGHVPPH
Trigger: ATGAGGGGGTACATGACCCAGTTTCCCACCTTCCCAAGCTGGCTGGGGAAGCACTCGTCTACAGGCAAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000510783.5
CDS TCA 72 bp GGAAGCTGTGGTGGTTTTGCCAACACCAGGAGGGCCTaGCAGCAACGCTGCTTTAAAACTAGAGCCATCATC +
Preference number: 6 (lower is better)
Translates to: GSCGGFANTRRA*QQRCFKTRAII
Trigger: GATGATGGCTCTAGTTTTAAAGCAGCGTTGCTGTCAGGCCCTCCTGGTGTTGGCAAAACCACCACAGCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS GCA 72 bp TCCGGATCTGGCTGTCCACTAGGTCACCATCGCATATaGTGTCTGCTGCTCTGCTTAAAAGCATCAGGTGCT +
Preference number: 6 (lower is better)
Translates to: SGSGCPLGHHRI*CLLLCLKASGA
Trigger: AGCACCTGATGCTTTTAAGCAGAGCAGCAGACAGCATATGCGATGGTGACCTAGTGGACAGCCAGATCCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS CCA 72 bp TTTCGGAGCCAGCGTAGGAGTTTGTTGGCACAGCTCTaGTCACCTTGCTGTCCAATTATGGTCTTGAGCGAG +
Preference number: 6 (lower is better)
Translates to: FRSQRRSLLAQL*SPCCPIMVLSE
Trigger: CTCGCTCAAGACCATAATTGGACAGCAAGGTGACCAGAGCTGTGCCAACAAACTCCTACGCTGGCTCCGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000502706.1
CDS CCA 72 bp GCAGGCAGAAGACTCCAGTTTTGCTTACTCCGGATCTaGCTGTCCACTAGGTCACCATCGCATATGCTGTCT +
Preference number: 6 (lower is better)
Translates to: AGRRLQFCLLRI*LSTRSPSHMLS
Trigger: AGACAGCATATGCGATGGTGACCTAGTGGACAGCCAGATCCGGAGTAAGCAAAACTGGAGTCTTCTGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS CAA 90 bp TCGGAAGAACTCTTTTGCCAGTTTCGGAGCCAGCGTAGGAGTTTGTaGGCACAGCTCTGGTCACCTTGCTGTCCAATTATGGTCTTGAGC +
Preference number: 6 (lower is better)
Translates to: SEELFCQFRSQRRSL*AQLWSPCCPIMVLS
Trigger: GCTCAAGACCATAATTGGACAGCAAGGTGACCAGAGCTGTGCCAACAAACTCCTACGCTGGCTCCGAAACTGGCAAAAGAGTTCTTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000502706.1
CDS TCA 72 bp TCTTGTGAAGGCTGCTTTCACCTTGGGATCCAGCTTTaGAAAGGGACTAGGTTTGCCACCCCAGCTGCTGAT +
Preference number: 6 (lower is better)
Translates to: SCEGCFHLGIQL*KGTRFATPAAD
Trigger: ATCAGCAGCTGGGGTGGCAAACCTAGTCCCTTTTCAAAGCTGGATCCCAAGGTGAAAGCAGCCTTCACAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000502991.5
ENST00000504974.1
ENST00000510783.5
ENST00000514572.1
CDS GCA 72 bp CAGCGTAGGAGTTTGTTGGCACAGCTCTGGTCACCTTaGTGTCCAATTATGGTCTTGAGCGAGGTTGGCTTA +
Preference number: 6 (lower is better)
Translates to: QRRSLLAQLWSP*CPIMVLSEVGL
Trigger: TAAGCCAACCTCGCTCAAGACCATAATTGGACAGCAAGGTGACCAGAGCTGTGCCAACAAACTCCTACGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000502706.1
CDS CCA 72 bp TCTTTTGCCAGTTTCGGAGCCAGCGTAGGAGTTTGTTaGCACAGCTCTGGTCACCTTGCTGTCCAATTATGG +
Preference number: 6 (lower is better)
Translates to: SFASFGASVGVC*HSSGHLAVQLW
Trigger: CCATAATTGGACAGCAAGGTGACCAGAGCTGTGCCAACAAACTCCTACGCTGGCTCCGAAACTGGCAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000502706.1
CDS CAA 72 bp TTGTTTTCACTGCTGTCATCAGCCAAATTCCTAGCCTaGCTGTCACCACTTGTCTCCTCAGCCACCTGCTCC +
Preference number: 6 (lower is better)
Translates to: LFSLLSSAKFLA*LSPLVSSATCS
Trigger: GGAGCAGGTGGCTGAGGAGACAAGTGGTGACAGCAAGGCTAGGAATTTGGCTGATGACAGCAGTGAAAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000502706.1
CDS CAA 72 bp CTCTTTTGCCAGTTTCGGAGCCAGCGTAGGAGTTTGTaGGCACAGCTCTGGTCACCTTGCTGTCCAATTATG +
Preference number: 6 (lower is better)
Translates to: LFCQFRSQRRSL*AQLWSPCCPIM
Trigger: CATAATTGGACAGCAAGGTGACCAGAGCTGTGCCAACAAACTCCTACGCTGGCTCCGAAACTGGCAAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000502706.1
CDS CAA 72 bp GAACTCTTTTGCCAGTTTCGGAGCCAGCGTAGGAGTTaGTTGGCACAGCTCTGGTCACCTTGCTGTCCAATT +
Preference number: 6 (lower is better)
Translates to: ELFCQFRSQRRS*LAQLWSPCCPI
Trigger: AATTGGACAGCAAGGTGACCAGAGCTGTGCCAACAAACTCCTACGCTGGCTCCGAAACTGGCAAAAGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000502706.1
CDS CAA 90 bp TCTTCGGAAGAACTCTTTTGCCAGTTTCGGAGCCAGCGTAGGAGTTaGTTGGCACAGCTCTGGTCACCTTGCTGTCCAATTATGGTCTTG +
Preference number: 6 (lower is better)
Translates to: SSEELFCQFRSQRRS*LAQLWSPCCPIMVL
Trigger: CAAGACCATAATTGGACAGCAAGGTGACCAGAGCTGTGCCAACAAACTCCTACGCTGGCTCCGAAACTGGCAAAAGAGTTCTTCCGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000502706.1
CDS CAA 90 bp ACTCAGCAACAATCGCCTTCAAACTGCTCTTACTCCGGGTGTCACTaGCATTCAGTTCCACGTAGCTGTATCCCAACTCCTGACACACCA +
Preference number: 6 (lower is better)
Translates to: TQQQSPSNCSYSGCH*HSVPRSCIPTPDTP
Trigger: TGGTGTGTCAGGAGTTGGGATACAGCTACGTGGAACTGAATGCAAGTGACACCCGGAGTAAGAGCAGTTTGAAGGCGATTGTTGCTGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349703.7
ENST00000381897.5
CDS CAA 72 bp CAATCGCCTTCAAACTGCTCTTACTCCGGGTGTCACTaGCATTCAGTTCCACGTAGCTGTATCCCAACTCCT +
Preference number: 6 (lower is better)
Translates to: QSPSNCSYSGCH*HSVPRSCIPTP
Trigger: AGGAGTTGGGATACAGCTACGTGGAACTGAATGCAAGTGACACCCGGAGTAAGAGCAGTTTGAAGGCGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000504554.1
CDS CAA 90 bp TTTTCCACTTTGTTTTCACTGCTGTCATCAGCCAAATTCCTAGCCTaGCTGTCACCACTTGTCTCCTCAGCCACCTGCTCCTTGAAATCC +
Preference number: 6 (lower is better)
Translates to: FSTLFSLLSSAKFLA*LSPLVSSATCSLKS
Trigger: GGATTTCAAGGAGCAGGTGGCTGAGGAGACAAGTGGTGACAGCAAGGCTAGGAATTTGGCTGATGACAGCAGTGAAAACAAAGTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000502706.1
CDS CAA 90 bp ACTCAGCAACAATCGCCTTCAAACTGCTCTTACTCCGGGTGTCACTaGCATTCAGTTCCACGTAGCTGTATCCCAACTCCTCAGTTTCAA +
Preference number: 6 (lower is better)
Translates to: TQQQSPSNCSYSGCH*HSVPRSCIPTPQFQ
Trigger: TTGAAACTGAGGAGTTGGGATACAGCTACGTGGAACTGAATGCAAGTGACACCCGGAGTAAGAGCAGTTTGAAGGCGATTGTTGCTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504554.1
CDS TCA 72 bp CGGAAAATTTACCAAACTTTGCTGTGCCAGCGGGCATaGAGACAGGGACTAGAGTTCACCCGAAGCTTTAAA +
Preference number: 6 (lower is better)
Translates to: RKIYQTLLCQRA*RQGLEFTRSFK
Trigger: TTTAAAGCTTCGGGTGAACTCTAGTCCCTGTCTTCATGCCCGCTGGCACAGCAAAGTTTGGTAAATTTTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502706.1
CDS GCA 72 bp TGCCTCTCCAGCTCCGCATCTTCATCAAGCTGTAATTaGTTGGCGATGGCTTCATCATTTAATCCAGACTCA +
Preference number: 6 (lower is better)
Translates to: CLSSSASSSSCN*LAMASSFNPDS
Trigger: TGAGTCTGGATTAAATGATGAAGCCATCGCCAAGCAATTACAGCTTGATGAAGATGCGGAGCTGGAGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000418436.5
ENST00000639695.1
CDS CCA 72 bp CAGCTCCCTTTGGTATTTCTTTGGAGCCCAGAGCCTTaGGACCTTCTCGATTTAAGTAGCTTCGATAAGCTT +
Preference number: 6 (lower is better)
Translates to: QLPLVFLWSPEP*DLLDLSSFDKL
Trigger: AAGCTTATCGAAGCTACTTAAATCGAGAAGGTCCCAAGGCTCTGGGCTCCAAAGAAATACCAAAGGGAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000504554.1
ENST00000509084.1
CDS CCA 72 bp AGACCAGCTGGACTGGTCAGGAGGGAGAGTAAAAAGTaGCTGTCGCTAGTGAAAAATGGTTTCATTTCTTCG +
Preference number: 6 (lower is better)
Translates to: RPAGLVRRESKK*LSLVKNGFISS
Trigger: CGAAGAAATGAAACCATTTTTCACTAGCGACAGCCACTTTTTACTCTCCCTCCTGACCAGTCCAGCTGGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000510783.5
CDS CAA 90 bp AGTTTGTTGGCACAGCTCTGGTCACCTTGCTGTCCAATTATGGTCTaGAGCGAGGTTGGCTTATATTTATCCACCCAGAGCAAATTTTCC +
Preference number: 6 (lower is better)
Translates to: SLLAQLWSPCCPIMV*SEVGLYLSTQSKFS
Trigger: GGAAAATTTGCTCTGGGTGGATAAATATAAGCCAACCTCGCTCAAGACCATAATTGGACAGCAAGGTGACCAGAGCTGTGCCAACAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000502706.1
CDS TCA 72 bp GATGGGCTTGTGCTGTGTCTAGATGCCTTTATAGCTTaGAGTGAGTATGGAGTAAGGTGGGCTTCCTTATTG +
Preference number: 6 (lower is better)
Translates to: DGLVLCLDAFIA*SEYGVRWASLL
Trigger: CAATAAGGAAGCCCACCTTACTCCATACTCACTTCAAGCTATAAAGGCATCTAGACACAGCACAAGCCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000502991.5
ENST00000504974.1
ENST00000510783.5
ENST00000514572.1
CDS CCA 72 bp TCTCCAGCTCCGCATCTTCATCAAGCTGTAATTGCTTaGCGATGGCTTCATCATTTAATCCAGACTCATCTG +
Preference number: 6 (lower is better)
Translates to: SPAPHLHQAVIA*RWLHHLIQTHL
Trigger: CAGATGAGTCTGGATTAAATGATGAAGCCATCGCCAAGCAATTACAGCTTGATGAAGATGCGGAGCTGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000418436.5
ENST00000639695.1
CDS CCA 72 bp TGGTCTTGGGTTCTTCATCCAACATGGCTAATGTTCTaGCAAACTCTTCATCTTCATGCAACTGCCTCTCCA +
Preference number: 6 (lower is better)
Translates to: WSWVLHPTWLMF*QTLHLHATASP
Trigger: TGGAGAGGCAGTTGCATGAAGATGAAGAGTTTGCCAGAACATTAGCCATGTTGGATGAAGAACCCAAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000418436.5
ENST00000504849.5
ENST00000639695.1
CDS CAA 72 bp CTCTCCAGCTCCGCATCTTCATCAAGCTGTAATTGCTaGGCGATGGCTTCATCATTTAATCCAGACTCATCT +
Preference number: 6 (lower is better)
Translates to: LSSSASSSSCNC*AMASSFNPDSS
Trigger: AGATGAGTCTGGATTAAATGATGAAGCCATCGCCAAGCAATTACAGCTTGATGAAGATGCGGAGCTGGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000418436.5
ENST00000639695.1
CDS CAA 72 bp GACAGCAACGCTGCTTTAAAACTAGAGCCATCATCTTaGCCGGAAAATTTACCAAACTTTGCTGTGCCAGCG +
Preference number: 6 (lower is better)
Translates to: DSNAALKLEPSS*PENLPNFAVPA
Trigger: CGCTGGCACAGCAAAGTTTGGTAAATTTTCCGGCAAAGATGATGGCTCTAGTTTTAAAGCAGCGTTGCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502706.1
CDS CAA 90 bp TGCAACTGCCTCTCCAGCTCCGCATCTTCATCAAGCTGTAATTGCTaGGCGATGGCTTCATCATTTAATCCAGACTCATCTGTATTTTGT +
Preference number: 6 (lower is better)
Translates to: CNCLSSSASSSSCNC*AMASSFNPDSSVFC
Trigger: ACAAAATACAGATGAGTCTGGATTAAATGATGAAGCCATCGCCAAGCAATTACAGCTTGATGAAGATGCGGAGCTGGAGAGGCAGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000418436.5
ENST00000639695.1
CDS CAA 72 bp ACGCAAATAGCCCAACATTATGCCACCTTTTTGGTCTaGGGTTCTTCATCCAACATGGCTAATGTTCTGGCA +
Preference number: 6 (lower is better)
Translates to: TQIAQHYATFLV*GSSSNMANVLA
Trigger: TGCCAGAACATTAGCCATGTTGGATGAAGAACCCAAGACCAAAAAGGTGGCATAATGTTGGGCTATTTGCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504849.5
CDS CAA 72 bp TCCTCAGTTTCAACTGCTATTTCATACTTGGATTTCTaGCCTGGCATAGTCCGAATCAGATTCAACAGGCCA +
Preference number: 6 (lower is better)
Translates to: SSVSTAISYLDF*PGIVRIRFNRP
Trigger: TGGCCTGTTGAATCTGATTCGGACTATGCCAGGCAAGAAATCCAAGTATGAAATAGCAGTTGAAACTGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504554.1
CDS CAA 90 bp TATCCCAACTCCTCAGTTTCAACTGCTATTTCATACTTGGATTTCTaGCCTGGCATAGTCCGAATCAGATTCAACAGGCCATCTTCATCA +
Preference number: 6 (lower is better)
Translates to: YPNSSVSTAISYLDF*PGIVRIRFNRPSSS
Trigger: TGATGAAGATGGCCTGTTGAATCTGATTCGGACTATGCCAGGCAAGAAATCCAAGTATGAAATAGCAGTTGAAACTGAGGAGTTGGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504554.1
CDS TCA 72 bp TTACTGAAGAGGCTGCTCCATTTGAATAAAAGCCTTTaGTGCTGGTATTGTTCAGTGACTCAGCAACAATCG +
Preference number: 6 (lower is better)
Translates to: LLKRLLHLNKSL*CWYCSVTQQQS
Trigger: CGATTGTTGCTGAGTCACTGAACAATACCAGCATCAAAGGCTTTTATTCAAATGGAGCAGCCTCTTCAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000504554.1
CDS TCA 72 bp TTTTGGCTAGAGCCTAGAACACGCAAGTATGAACACTaGTCTGTACTGTATATTCAGAACGCAAATAGCCCA +
Preference number: 6 (lower is better)
Translates to: FWLEPRTRKYEH*SVLYIQNANSP
Trigger: TGGGCTATTTGCGTTCTGAATATACAGTACAGATCAGTGTTCATACTTGCGTGTTCTAGGCTCTAGCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504849.5
CDS CAA 72 bp GACAGCAACGCTGCTTTAAAACTAGAGCCATCATCTTaGCCGGAAAATTTACCAAACTTTGCTGCGTGTTTT +
Preference number: 6 (lower is better)
Translates to: DSNAALKLEPSS*PENLPNFAACF
Trigger: AAAACACGCAGCAAAGTTTGGTAAATTTTCCGGCAAAGATGATGGCTCTAGTTTTAAAGCAGCGTTGCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381897.5
CDS CAA 72 bp TATCCCAACTCCTCAGTTTCAACTGCTATTTCATACTaGGATTTCTTGCCTGGCATAGTCCGAATCAGATTC +
Preference number: 6 (lower is better)
Translates to: YPNSSVSTAISY*DFLPGIVRIRF
Trigger: GAATCTGATTCGGACTATGCCAGGCAAGAAATCCAAGTATGAAATAGCAGTTGAAACTGAGGAGTTGGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504554.1
CDS CAA 72 bp TTCAGAACGCAAATAGCCCAACATTATGCCACCTTTTaGGTCTTGGGTTCTTCATCCAACATGGCTAATGTT +
Preference number: 6 (lower is better)
Translates to: FRTQIAQHYATF*VLGSSSNMANV
Trigger: AACATTAGCCATGTTGGATGAAGAACCCAAGACCAAAAAGGTGGCATAATGTTGGGCTATTTGCGTTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504849.5
CDS CAA 90 bp ATATTCAGAACGCAAATAGCCCAACATTATGCCACCTTTTTGGTCTaGGGTTCTTCATCCAACATGGCTAATGTTCTGGCAAACTCTTCA +
Preference number: 6 (lower is better)
Translates to: IFRTQIAQHYATFLV*GSSSNMANVLANSS
Trigger: TGAAGAGTTTGCCAGAACATTAGCCATGTTGGATGAAGAACCCAAGACCAAAAAGGTGGCATAATGTTGGGCTATTTGCGTTCTGAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504849.5
CDS CAA 90 bp TACTGTATATTCAGAACGCAAATAGCCCAACATTATGCCACCTTTTaGGTCTTGGGTTCTTCATCCAACATGGCTAATGTTCTGGCAAAC +
Preference number: 6 (lower is better)
Translates to: YCIFRTQIAQHYATF*VLGSSSNMANVLAN
Trigger: GTTTGCCAGAACATTAGCCATGTTGGATGAAGAACCCAAGACCAAAAAGGTGGCATAATGTTGGGCTATTTGCGTTCTGAATATACAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504849.5
CDS CCA 72 bp CTCTTTACGGGAGCTATTTACAAGTTTCTTTCCACTTaGTATTACTCCAAAGAATTTCCGAATGTCCATCGC +
Preference number: 6 (lower is better)
Translates to: LFTGAIYKFLST*YYSKEFPNVHR
Trigger: GCGATGGACATTCGGAAATTCTTTGGAGTAATACCAAGTGGAAAGAAACTTGTAAATAGCTCCCGTAAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503784.1
CDS CAA 72 bp CCCTATTATTCACCAGGCAAGGAAAGATCATCTATTTaGAGGTTCTCCTGTCTGTGGCTTAAAATACTACCT +
Preference number: 6 (lower is better)
Translates to: PYYSPGKERSSI*RFSCLWLKILP
Trigger: AGGTAGTATTTTAAGCCACAGACAGGAGAACCTCAAAATAGATGATCTTTCCTTGCCTGGTGAATAATAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514572.1
CDS CAA 72 bp TACTACCTTGATCATGGCATCAGTTTCTATAGCATCTaGGTCTTTCTCATCAGATTGAGAGTCATCTTCATT +
Preference number: 6 (lower is better)
Translates to: YYLDHGISFYSI*VFLIRLRVIFI
Trigger: AATGAAGATGACTCTCAATCTGATGAGAAAGACCAAGATGCTATAGAAACTGATGCCATGATCAAGGTAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514572.1
CDS CCA 72 bp GAGAAGAGACTTCTCCTATTTTGTCAGCTGATGACTTaGAATGTTGCTGAGATTCTTTTGAACTTTCATATT +
Preference number: 6 (lower is better)
Translates to: EKRLLLFCQLMT*NVAEILLNFHI
Trigger: AATATGAAAGTTCAAAAGAATCTCAGCAACATTCCAAGTCATCAGCTGACAAAATAGGAGAAGTCTCTTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000349703.7
ENST00000381897.5
ENST00000418436.5
ENST00000512726.1
ENST00000512881.5
ENST00000639695.1