RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for REXO5 (Homo sapiens)

Ensembl gene IDs: ENSG00000005189

Ensembl transcript IDs: ENST00000261377.11, ENST00000348433.10, ENST00000561474.1, ENST00000563045.1, ENST00000563068.1, ENST00000563617.1, ENST00000564274.5, ENST00000565340.5, ENST00000566276.5, ENST00000566518.5, ENST00000566993.5, ENST00000567297.5, ENST00000568046.5, ENST00000568476.5, ENST00000568501.5, ENST00000568647.5, ENST00000568894.5

Found 397 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATaGAAACATGGCAGGCCGACTCACGAACACAGGCCTGGGCCAGCG +
Preference number: 1 (lower is better)
Translates to: DHILCHCLQGVRNGT*KHGRPTHEHRPGPA
Trigger: CGCTGGCCCAGGCCTGTGTTCGTGAGTCGGCCTGCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR GCA 90 bp GTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTaGCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCAGGCCG +
Preference number: 1 (lower is better)
Translates to: VCWLGRLQPDHILCH*LQGVRNGTWKHGRP
Trigger: CGGCCTGCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
3UTR GCA 90 bp AAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTaGCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGC +
Preference number: 1 (lower is better)
Translates to: KAVCWLGRLQPDHIL*HCLQGVRNGTWKHG
Trigger: GCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
3UTR GCA 90 bp TTAGGCAAGATCACAGCTTCCAGGCCAAGAAAGAGGCGGGGCTCCTaGAATAGCTGTTCTTTGAAGGTTTCACTCACTCCAGACAGATAT +
Preference number: 1 (lower is better)
Translates to: LGKITASRPRKRRGS*NSCSLKVSLTPDRY
Trigger: ATATCTGTCTGGAGTGAGTGAAACCTTCAAAGAACAGCTATTGCAGGAGCCCCGCCTCTTTCTTGGCCTGGAAGCTGTGATCTTGCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR TCA 90 bp CTGTATACAGAGATGAGGCTGACGGGTTTCAAGAACAAAAGTCATTaGCTGGACTGGGCCAAAGCTTTTAAACAGCCTCTTCAGAGCCCT +
Preference number: 1 (lower is better)
Translates to: LYTEMRLTGFKNKSH*LDWAKAFKQPLQSP
Trigger: AGGGCTCTGAAGAGGCTGTTTAAAAGCTTTGGCCCAGTCCAGTCAATGACTTTTGTTCTTGAAACCCGTCAGCCTCATCTCTGTATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR TCA 90 bp CCACTTGATCCTCATCCTTTTGTTCATCTCCTCAGTGAGGACAGGTaGAAAGGCCTTAAAAGAGAACTGAACAATGCTGAAGGGAAACAG +
Preference number: 1 (lower is better)
Translates to: PLDPHPFVHLLSEDR*KGLKRELNNAEGKQ
Trigger: CTGTTTCCCTTCAGCATTGTTCAGTTCTCTTTTAAGGCCTTTTCACCTGTCCTCACTGAGGAGATGAACAAAAGGATGAGGATCAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR TCA 90 bp TACCGAGCCAATTCAAGGATTGTTCTAGCATCTTCTGTGGCATCATaGCCAAGTCTGTCTGGACACTGTATATCCTTCCCCAAAATAACT +
Preference number: 1 (lower is better)
Translates to: YRANSRIVLASSVAS*PSLSGHCISFPKIT
Trigger: AGTTATTTTGGGGAAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATGCTAGAACAATCCTTGAATTGGCTCGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
3UTR TCA 90 bp CTGGCCTGCTCAAGAACCTCTTTATTTGAAAGACACTTAATAGTTTaGCAATTTCTGGAAGATGGAAGTTCACCAGCATCTGTCTCCCGG +
Preference number: 1 (lower is better)
Translates to: LACSRTSLFERHLIV*QFLEDGSSPASVSR
Trigger: CCGGGAGACAGATGCTGGTGAACTTCCATCTTCCAGAAATTGTCAAACTATTAAGTGTCTTTCAAATAAAGAGGTTCTTGAGCAGGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR CCA 90 bp TGTTCTTTGAAGGTTTCACTCACTCCAGACAGATATATAGAGCCTTaGTTTTCAGAATCTCCTTCCAGCTCATTCACGAGGGTGTCACAA +
Preference number: 1 (lower is better)
Translates to: CSLKVSLTPDRYIEP*FSESPSSSFTRVSQ
Trigger: TTGTGACACCCTCGTGAATGAGCTGGAAGGAGATTCTGAAAACCAAGGCTCTATATATCTGTCTGGAGTGAGTGAAACCTTCAAAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR CAA 90 bp AGGTGCCTGGGGGTTAGGGCATGCCTGCCTTTCAGCTTCCAGTCCTaGCCTGTGAGAATGTTGAGGGCCTGCTGGGCACTGCCAAAACTT +
Preference number: 2 (lower is better)
Translates to: RCLGVRACLPFSFQS*PVRMLRACWALPKL
Trigger: AAGTTTTGGCAGTGCCCAGCAGGCCCTCAACATTCTCACAGGCAAGGACTGGAAGCTGAAAGGCAGGCATGCCCTAACCCCCAGGCACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR-3UTR CCA 90 bp ACATGGCAGGCCGACTCACGAACACAGGCCTGGGCCAGCGCTTTCTTCTTCCTCGCCCTTCCATTGTCTTaGGCAGATCTCCAGCTCTTT +
Preference number: 2 (lower is better)
Translates to: TWQADSRTQAWASAFFFLALPLS*ADLQLF
Trigger: AAAGAGCTGGAGATCTGCCCAAGACAATGGAAGGGC...GAGGAAGAAGAAAGCGCTGGCCCAGGCCTGTGTTCGTGAGTCGGCCTGCCATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR-3UTR CCA 90 bp TGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATaGAAACATGGCAGGCCGACT +
Preference number: 2 (lower is better)
Translates to: CWLGRLQPDHILCHCLQGVRNGT*KHGRPT
Trigger: AGTCGGCCTGCCATGTTTCCATGTGCCATTTCTTAC...CCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR-3UTR CCA 90 bp TCTAGCATCTTCTGTGGCATCATGACCAAGTCTGTCTGGACACTGTATATCCTTAAGCTGTCTGCTGGTTaGGGAGGCTACAGCCTGACC +
Preference number: 2 (lower is better)
Translates to: SSIFCGIMTKSVWTLYILKLSAG*GGYSLT
Trigger: GGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTT...AAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATGCTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR CAA 90 bp GCTTCCAGGCCAAGAAAGAGGCGGGGCTCCTGCAATAGCTGTTCTTaGAAGGTTTCACTCACTCCAGACAGATATATAGAGCCTTGGTTT +
Preference number: 2 (lower is better)
Translates to: ASRPRKRRGSCNSCS*KVSLTPDRYIEPWF
Trigger: AAACCAAGGCTCTATATATCTGTCTGGAGTGAGTGAAACCTTCAAAGAACAGCTATTGCAGGAGCCCCGCCTCTTTCTTGGCCTGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR-3UTR TCA 90 bp AGTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTATGATGGGATCATCCTaGAGGTTGATGGCGGCTTTT +
Preference number: 2 (lower is better)
Translates to: SFHKAVCWLGRLQPDHILMMGSS*RLMAAF
Trigger: AAAAGCCGCCATCAACCTTCAGGATGATCCCATCAT...AAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR-3UTR TCA 90 bp AGAATACCATCCAAGGATTCTATGGCCAGCTGGGCAGCTTCTAGGACTTCATACGCCTCTGTACATCTTTaGGTTTGGTCGTCACTGGGT +
Preference number: 2 (lower is better)
Translates to: RIPSKDSMASWAASRTSYASVHL*VWSSLG
Trigger: ACCCAGTGACGACCAAACTCAAAGATGTACAGAGGC...GTATGAAGTCCTAGAAGCTGCCCAGCTGGCCATAGAATCCTTGGATGGTATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR-3UTR TCA 90 bp AGAATACCATCCAAGGATTCTATGGCCAGCTGGGCAGCTTCTAGGACTTCATACTCTTCTGTGGCATCATaGCCAAGTCTGTCTGGACAC +
Preference number: 2 (lower is better)
Translates to: RIPSKDSMASWAASRTSYSSVAS*PSLSGH
Trigger: GTGTCCAGACAGACTTGGTCATGATGCCACAGAAGA...GTATGAAGTCCTAGAAGCTGCCCAGCTGGCCATAGAATCCTTGGATGGTATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR-3UTR TCA 90 bp AGCATCTTCTGTGGCATCATGACCAAGTCTGTCTGGACACTGTATATCCTTCCCATGATGGGATCATCCTaGAGGTTGATGGCGGCTTTT +
Preference number: 2 (lower is better)
Translates to: SIFCGIMTKSVWTLYILPMMGSS*RLMAAF
Trigger: AAAAGCCGCCATCAACCTTCAGGATGATCCCATCAT...GGGAAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
3UTR-3UTR GCA 90 bp CTGCCTCTGTACATCTTTGAGTTTGGTCGTCACTGGGTTAAGAATCTTCTTCGTCAGCAACCAGTGAGATaGGTGTTAGCTCTCTCCCCT +
Preference number: 2 (lower is better)
Translates to: LPLYIFEFGRHWVKNLLRQQPVR*VLALSP
Trigger: AGGGGAGAGAGCTAACACGCATCTCACTGGTTGCTG...ACGAAGAAGATTCTTAACCCAGTGACGACCAAACTCAAAGATGTACAGAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
3UTR CAA 90 bp ACTCTTTTAGCTGCTATACCAAGTTTCCATAAAGCTGTCTGCTGGTaGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAA +
Preference number: 2 (lower is better)
Translates to: TLLAAIPSFHKAVCW*GRLQPDHILCHCLQ
Trigger: TTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAACTTGGTATAGCAGCTAAAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
3UTR CAA 90 bp ACAGCATCAGGAGGAAGCAGTGCTTTTAACTGCCTCTGTACATCTTaGAGTTTGGTCGTCACTGGGTTAAGAATCTTCTTCGTGATTCCC +
Preference number: 2 (lower is better)
Translates to: TASGGSSAFNCLCTS*SLVVTGLRIFFVIP
Trigger: GGGAATCACGAAGAAGATTCTTAACCCAGTGACGACCAAACTCAAAGATGTACAGAGGCAGTTAAAAGCACTGCTTCCTCCTGATGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
3UTR CAA 90 bp TGTCAGAAGGCATCTGGTCAAGCCCACTTTCTTAGAGCCATACTTTaGAATGATGGGATCATCCTGAAGGTTGATGGCGGCTTTTGCATT +
Preference number: 2 (lower is better)
Translates to: CQKASGQAHFLRAIL*NDGIILKVDGGFCI
Trigger: AATGCAAAAGCCGCCATCAACCTTCAGGATGATCCCATCATTCAAAAGTATGGCTCTAAGAAAGTGGGCTTGACCAGATGCCTTCTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR-3UTR TCA 90 bp TCTTTGAGTTTGGTCGTCACTGGGTTAAGAATCTTCTTCGTGATTCCCGAAAAGCTCTCCCCTTGGATGTaGGGCACATTTCACAGTCAA +
Preference number: 2 (lower is better)
Translates to: SLSLVVTGLRIFFVIPEKLSPWM*GTFHSQ
Trigger: TTGACTGTGAAATGTGCCTCACATCCAAGGGGAGAG...CTTTTCGGGAATCACGAAGAAGATTCTTAACCCAGTGACGACCAAACTCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566518.5
3UTR-3UTR TCA 90 bp GAAATACCGAGCCAATTCAAGGATTGTTCTAGCATCTTCTGTGGCATCATGACCTTCCCGAAAAGCTGGTaGGGTAGTCCAGAATCTTGT +
Preference number: 2 (lower is better)
Translates to: EIPSQFKDCSSIFCGIMTFPKSW*GSPESC
Trigger: ACAAGATTCTGGACTACCTCACCAGCTTTTCGGGAA...GGTCATGATGCCACAGAAGATGCTAGAACAATCCTTGAATTGGCTCGGTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
3UTR-3UTR TCA 90 bp CTGTACATCTTTGAGTTTGGTCGTCACTGGGTTAAGAATCTTCTTCGTGATTCCCTCTCCCCTTGGATGTaGGGCACTTGTAATGGAAAG +
Preference number: 2 (lower is better)
Translates to: LYIFEFGRHWVKNLLRDSLSPWM*GTCNGK
Trigger: CTTTCCATTACAAGTGCCTCACATCCAAGGGGAGAG...GGAATCACGAAGAAGATTCTTAACCCAGTGACGACCAAACTCAAAGATGTACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR-3UTR GCA 90 bp CACAGGCCTCTGCACCTTGATGCAGATACCATCTACCAGAATACCATCCAAGGAATTTCCACTCTGGCCTaGTCAAGAACCTCTTTATTT +
Preference number: 2 (lower is better)
Translates to: HRPLHLDADTIYQNTIQGISTLA*SRTSLF
Trigger: AAATAAAGAGGTTCTTGAGCAGGCCAGAGTGGAAAT...TCCTTGGATGGTATTCTGGTAGATGGTATCTGCATCAAGGTGCAGAGGCCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR CAA 90 bp TCAGGAGGAAGCAGTGCTTTTAACTGCCTCTGTACATCTTTGAGTTaGGTCGTCACTGGGTTAAGAATCTTCTTCGTGATTCCCGAAAAG +
Preference number: 2 (lower is better)
Translates to: SGGSSAFNCLCTSLS*VVTGLRIFFVIPEK
Trigger: CTTTTCGGGAATCACGAAGAAGATTCTTAACCCAGTGACGACCAAACTCAAAGATGTACAGAGGCAGTTAAAAGCACTGCTTCCTCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
3UTR-3UTR TCA 90 bp TCTTTGAGTTTGGTCGTCACTGGGTTAAGAATCTTCTTCGTGATTCCCGAAAAGAGCCATACTTTTGAATaGTGGGATCATCCTGAAGGT +
Preference number: 2 (lower is better)
Translates to: SLSLVVTGLRIFFVIPEKSHTFE*WDHPEG
Trigger: ACCTTCAGGATGATCCCATCATTCAAAAGTATGGCT...CTTTTCGGGAATCACGAAGAAGATTCTTAACCCAGTGACGACCAAACTCAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
3UTR-3UTR GCA 90 bp TCTAGCATCTTCTGTGGCATCATGACCAAGTCTGTCTGGACACTGTATATCCTTAGCAGTGCTTTTAACTaGCTCTGTACATCTTTGAGT +
Preference number: 2 (lower is better)
Translates to: SSIFCGIMTKSVWTLYILSSAFN*LCTSLS
Trigger: ACTCAAAGATGTACAGAGGCAGTTAAAAGCACTGCT...AAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATGCTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
3UTR-3UTR GCA 90 bp TCTAGCATCTTCTGTGGCATCATGACCAAGTCTGTCTGGACACTGTATATCCTTGAGAGGACTATTGTCTaGTATAGAACCATTACATTT +
Preference number: 2 (lower is better)
Translates to: SSIFCGIMTKSVWTLYILERTIV*YRTITF
Trigger: AAATGTAATGGTTCTATAGCAGACAATAGTCCTCTC...AAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATGCTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566518.5
3UTR CAA 90 bp TTGGATGTGAGGCACATTTCACAGTCAAGTCCAAAGAGAGGACTATaGTCTGCTATAGAACCATTACATTTGGTAAGTAAAAAGTTTTCA +
Preference number: 2 (lower is better)
Translates to: LDVRHISQSSPKRGL*SAIEPLHLVSKKFS
Trigger: TGAAAACTTTTTACTTACCAAATGTAATGGTTCTATAGCAGACAATAGTCCTCTCTTTGGACTTGACTGTGAAATGTGCCTCACATCCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566518.5
3UTR CCA 72 bp ATCTTCCGGCTCCAGCGCCAGGCTGCTATCTTCGGGTaGTCCAGTTTCAGAGTCTGCAAGGCCTCCTGTTCA +
Preference number: 3 (lower is better)
Translates to: IFRLQRQAAIFG*SSFRVCKASCS
Trigger: TGAACAGGAGGCCTTGCAGACTCTGAAACTGGACCACCCGAAGATAGCAGCCTGGCGCTGGAGCCGGAAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR-3UTR CAA 90 bp ACATGGCAGGCCGACTCACGAACACAGGCCTGGGCCAGCGCTTTCTTCTTCCTCCAAGAACAAAAGTCATaGACTGGACTGGGCCAAAGC +
Preference number: 3 (lower is better)
Translates to: TWQADSRTQAWASAFFFLQEQKS*TGLGQS
Trigger: GCTTTGGCCCAGTCCAGTCAATGACTTTTGTTCTTG...GAGGAAGAAGAAAGCGCTGGCCCAGGCCTGTGTTCGTGAGTCGGCCTGCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR GCA 72 bp TGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTaGCATTGCCTACAAGGGGTAAGAAATGGCACATGG +
Preference number: 3 (lower is better)
Translates to: CWLGRLQPDHIL*HCLQGVRNGTW
Trigger: CCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
3UTR CCA 72 bp CTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATaGAAACATGGCAGGCCGACTCACGAACACAGGCCT +
Preference number: 3 (lower is better)
Translates to: LCHCLQGVRNGT*KHGRPTHEHRP
Trigger: AGGCCTGTGTTCGTGAGTCGGCCTGCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR GCA 72 bp ATCACAGCTTCCAGGCCAAGAAAGAGGCGGGGCTCCTaGAATAGCTGTTCTTTGAAGGTTTCACTCACTCCA +
Preference number: 3 (lower is better)
Translates to: ITASRPRKRRGS*NSCSLKVSLTP
Trigger: TGGAGTGAGTGAAACCTTCAAAGAACAGCTATTGCAGGAGCCCCGCCTCTTTCTTGGCCTGGAAGCTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR-3UTR CAA 90 bp AAGAAATGGCACATGGAAACATGGCAGGCCGACTCACGAACACAGGCCTGGGCCAGCATTCTAAAACACTaGTGTTTGGGTGCTGAAGTA +
Preference number: 3 (lower is better)
Translates to: KKWHMETWQADSRTQAWASILKH*CLGAEV
Trigger: TACTTCAGCACCCAAACACAAGTGTTTTAGAATGCT...GGCCCAGGCCTGTGTTCGTGAGTCGGCCTGCCATGTTTCCATGTGCCATTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR-3UTR CAA 90 bp AGCATCTTCTGTGGCATCATGACCAAGTCTGTCTGGACACTGTATATCCTTCCCGTTAGCTCTCTCCCCTaGGATGTGAGGCACATTTCA +
Preference number: 3 (lower is better)
Translates to: SIFCGIMTKSVWTLYILPVSSLP*DVRHIS
Trigger: TGAAATGTGCCTCACATCCAAGGGGAGAGAGCTAAC...GGGAAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566518.5
3UTR GCA 72 bp AGCTTCCAGTCCTTGCCTGTGAGAATGTTGAGGGCCTaGTGGGCACTGCCAAAACTTTTGAATTTCAGGAAA +
Preference number: 3 (lower is better)
Translates to: SFQSLPVRMLRA*WALPKLLNFRK
Trigger: TTTCCTGAAATTCAAAAGTTTTGGCAGTGCCCAGCAGGCCCTCAACATTCTCACAGGCAAGGACTGGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR CCA 72 bp CTGCTATACCAAGTTTCCATAAAGCTGTCTGCTGGTTaGGGAGGCTACAGCCTGACCACATTCTTTGCCATT +
Preference number: 3 (lower is better)
Translates to: LLYQVSIKLSAG*GGYSLTTFFAI
Trigger: AATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAACTTGGTATAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
3UTR-3UTR CAA 90 bp TGGAAAGTGAAACGTTCTCATTTCCTCCTTTGTCAGAAGGCATCTGGTCAAGCCCCACATTCTTTGCCATaGCCTACAAGGGGTAAGAAA +
Preference number: 3 (lower is better)
Translates to: WKVKRSHFLLCQKASGQAPHSLP*PTRGKK
Trigger: TTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGG...GGCTTGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAACGTTTCACTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR CCA 72 bp TCTACCAGAATACCATCCAAGGATTCTATGGCCAGCTaGGCAGCTTCTAGGACTTCATACTGTATACAGAGA +
Preference number: 3 (lower is better)
Translates to: STRIPSKDSMAS*AASRTSYCIQR
Trigger: TCTCTGTATACAGTATGAAGTCCTAGAAGCTGCCCAGCTGGCCATAGAATCCTTGGATGGTATTCTGGTAGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR-3UTR CAA 90 bp GAAAGTGAAACGTTCTCATTTCCTCCTTTGTCAGAAGGCATCTGGTCAAGCCCACTTAGAGCCATACTTTaGAATGATGGGATCATCCTG +
Preference number: 3 (lower is better)
Translates to: ESETFSFPPLSEGIWSSPLRAIL*NDGIIL
Trigger: CAGGATGATCCCATCATTCAAAAGTATGGCTCTAAG...TGGGCTTGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAACGTTTCACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
3UTR-3UTR CAA 90 bp GAGGCACATTTCACAGTCAAGTCCAAAGAGAGGACTATTGTCTGCTATAGAACCTTCTCATTTCCTCCTTaGTCAGAAGGCATCTGGTCA +
Preference number: 3 (lower is better)
Translates to: EAHFTVKSKERTIVCYRTFSFPP*SEGIWS
Trigger: TGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAA...GGTTCTATAGCAGACAATAGTCCTCTCTTTGGACTTGACTGTGAAATGTGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566518.5
3UTR TCA 72 bp AATTCAAGGATTGTTCTAGCATCTTCTGTGGCATCATaGCCAAGTCTGTCTGGACACTGTATATCCTTCCCC +
Preference number: 3 (lower is better)
Translates to: NSRIVLASSVAS*PSLSGHCISFP
Trigger: GGGGAAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATGCTAGAACAATCCTTGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
3UTR TCA 72 bp CCTCATCCTTTTGTTCATCTCCTCAGTGAGGACAGGTaGAAAGGCCTTAAAAGAGAACTGAACAATGCTGAA +
Preference number: 3 (lower is better)
Translates to: PHPFVHLLSEDR*KGLKRELNNAE
Trigger: TTCAGCATTGTTCAGTTCTCTTTTAAGGCCTTTTCACCTGTCCTCACTGAGGAGATGAACAAAAGGATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566993.5
3UTR-3UTR CAA 90 bp GCATCTGGTCAAGCCCACTTTCTTAGAGCCATACTTTTGAATGATGGGATCATCCCAAAGAGAGGACTATaGTCTGCTATAGAACCATTA +
Preference number: 3 (lower is better)
Translates to: ASGQAHFLRAILLNDGIIPKRGL*SAIEPL
Trigger: TAATGGTTCTATAGCAGACAATAGTCCTCTCTTTGG...GATGATCCCATCATTCAAAAGTATGGCTCTAAGAAAGTGGGCTTGACCAGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566518.5
3UTR-3UTR CAA 90 bp TGCTTAAGGAAATACCGAGCCAATTCAAGGATTGTTCTAGCATCTTCTGTGGCATGTACATCTTTGAGTTaGGTCGTCACTGGGTTAAGA +
Preference number: 3 (lower is better)
Translates to: CLRKYRANSRIVLASSVACTSLS*VVTGLR
Trigger: TCTTAACCCAGTGACGACCAAACTCAAAGATGTACA...TGCCACAGAAGATGCTAGAACAATCCTTGAATTGGCTCGGTATTTCCTTAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR TCA 90 bp GCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGCAGGTGGTAAGCCTCTaGGCCAGGCATGGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: AGWGGYSLTTFFAIAYKGQVVSL*ARHGGA
Trigger: GGCACCTCCATGCCTGGCTCAGAGGCTTACCACCTG...CCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
3UTR CAA 72 bp GGGGTTAGGGCATGCCTGCCTTTCAGCTTCCAGTCCTaGCCTGTGAGAATGTTGAGGGCCTGCTGGGCACTG +
Preference number: 4 (lower is better)
Translates to: GVRACLPFSFQS*PVRMLRACWAL
Trigger: CAGTGCCCAGCAGGCCCTCAACATTCTCACAGGCAAGGACTGGAAGCTGAAAGGCAGGCATGCCCTAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR GCA 90 bp AAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCGGCAAAGAAGGAAGGTaGTGCCGAGCGGCTTCGCCG +
Preference number: 4 (lower is better)
Translates to: KLSAGWGGYSLTTFFAIAGKEGR*CRAASP
Trigger: CGGCGAAGCCGCTCGGCAGCACCTTCCTTCTTTGCC...GGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp TGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGAGGCATGGAGGTGCCTaGGGGTTAGGGCATGCCTGC +
Preference number: 4 (lower is better)
Translates to: CWLGRLQPDHILCHCLQGRHGGA*GLGHAC
Trigger: GCAGGCATGCCCTAACCCCCAGGCACCTCCATGCCT...CCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp TCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGCAGGTGGTAAGCCTCTaGGCCAGGCATGGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: SAGWGGYSLTTFFAIAYKQVVSL*ARHGGA
Trigger: GGCACCTCCATGCCTGGCTCAGAGGCTTACCACCTG...CTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp TTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCTTCCTGGCAGCAGGATaGGGCAGAGAGTGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: FHKAVCWLGRLQPDHILCFLAAG*GRECPG
Trigger: GCCCGGGCACTCTCTGCCTCATCCTGCTGCCAGGAA...GCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAAGAAGGAAGGTGCTaGCGAGCGGCTTCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LSAGWGGYSLTTFFAIAYKEGRC*RAASPP
Trigger: AGGCGGCGAAGCCGCTCGGCAGCACCTTCCTTCTTT...GTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp GCCAGGCATGGAGGTGCCTGGGGGTTAGGGCATGCCTGCCTTTCAGCTTCCAGTAAGAGGCGGGGCTCCTaGAATAGCTGTTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: ARHGGAWGLGHACLSASSKRRGS*NSCSLK
Trigger: CTTCAAAGAACAGCTATTGCAGGAGCCCCGCCTCTT...ACTGGAAGCTGAAAGGCAGGCATGCCCTAACCCCCAGGCACCTCCATGCCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CCA 90 bp GCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGCAACGGGCGTCTGCCTaGCAAAGAAGGAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: AGWGGYSLTTFFAIAYKGQRASA*QRRKVL
Trigger: CAGCACCTTCCTTCTTTGCCAGGCAGACGCCCGTTG...CCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp GCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGGGTCCCTTCCCTCTCTaGCTCCATGGCGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: AGWGGYSLTTFFAIAYKGGPFPL*LHGGFS
Trigger: TGAGAATCCGCCATGGAGCCAGAGAGGGAAGGGACC...CCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp GCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGGGGGAGGCTACAGCCTaGCCACATTCTTTGCCATTG +
Preference number: 4 (lower is better)
Translates to: AGWGGYSLTTFFAIAYKGGEATA*PHSLPL
Trigger: CAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCC...CCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGC
57% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp AACAATGCTGAAGGGAAACAGGGGGATTTCCACTCTGGCCTGCTCAAGAACCTCGGCAAAGAAGGAAGGTaGTGCCGAGCGGCTTCGCCG +
Preference number: 4 (lower is better)
Translates to: NNAEGKQGDFHSGLLKNLGKEGR*CRAASP
Trigger: CGGCGAAGCCGCTCGGCAGCACCTTCCTTCTTTGCC...GAGGTTCTTGAGCAGGCCAGAGTGGAAATCCCCCTGTTTCCCTTCAGCATTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR GCA 90 bp AAGAAATGGCACATGGAAACATGGCAGGCCGACTCACGAACACAGGCCTGGGCCGCTACAACGGGCGTCTaGCTGGCAAAGAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: KKWHMETWQADSRTQAWAATTGV*LAKKEG
Trigger: ACCTTCCTTCTTTGCCAGGCAGACGCCCGTTGTAGC...GGCCCAGGCCTGTGTTCGTGAGTCGGCCTGCCATGTTTCCATGTGCCATTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CCA 90 bp CTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACCAACGGGCGTCTGCCTaGCAAAGAAGGAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LSAGWGGYSLTTFFAIAYQRASA*QRRKVL
Trigger: CAGCACCTTCCTTCTTTGCCAGGCAGACGCCCGTTG...GTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp GCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGATAAGCGGGCTTTCTTaGCCTCGGGCTGACTCTCCT +
Preference number: 4 (lower is better)
Translates to: AGWGGYSLTTFFAIAYKGISGLS*PRADSP
Trigger: AGGAGAGTCAGCCCGAGGCCAAGAAAGCCCGCTTAT...CCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp AGCATCTTCTGTGGCATCATGACCAAGTCTGTCTGGACACTGTATATCCTTCCCTTCCTGGCAGCAGGATaGGGCAGAGAGTGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: SIFCGIMTKSVWTLYILPFLAAG*GRECPG
Trigger: GCCCGGGCACTCTCTGCCTCATCCTGCTGCCAGGAA...GGGAAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR TCA 90 bp TGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGCCAGAGAGTGAACCATaGGTGCTCTTGGTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: CWLGRLQPDHILCHCLQGPESEP*VLLVPG
Trigger: GCCAGGAACCAAGAGCACTCATGGTTCACTCTCTGG...CCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACGGGTTAGGGCATGCCTaGCTTTCAGCTTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LSAGWGGYSLTTFFAIAYGLGHA*LSASSP
Trigger: AGGACTGGAAGCTGAAAGGCAGGCATGCCCTAACCC...GTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp GTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCTCCAGCGCCAGGCTaGTATCTTCGGGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: VSIKLSAGWGGYSLTTFFAPAPG*YLRVVQ
Trigger: CTGGACCACCCGAAGATAGCAGCCTGGCGCTGGAGC...AAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp TCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCCCCGACCAGCTTATTTaGGGCCTGCCTGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: SIKLSAGWGGYSLTTFFAPDQLI*GLPAFP
Trigger: AGGGAAAGCAGGCAGGCCCCAAATAAGCTGGTCGGG...GGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp GCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGGGGGGATTTCCACTCTaGCCTGCTCAAGAACCTCTT +
Preference number: 4 (lower is better)
Translates to: AGWGGYSLTTFFAIAYKGGGFPL*PAQEPL
Trigger: AAGAGGTTCTTGAGCAGGCCAGAGTGGAAATCCCCC...CCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGC
56% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp CAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAGGCATGGAGGTGCCTaGGGGTTAGGGCATGCCTGC +
Preference number: 4 (lower is better)
Translates to: QPDHILCHCLQGVRNGTWRHGGA*GLGHAC
Trigger: GCAGGCATGCCCTAACCCCCAGGCACCTCCATGCCT...CCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp AAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCAAGCTGTCTGCTGGTTaGGGAGGCTACAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: KAVCWLGRLQPDHILCHCKLSAG*GGYSLT
Trigger: GGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTT...GCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp TCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCAGGCCCCTGCCTGCTTTCCCTaGCCTTCCTGGGGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: SLPLPTRGKKWHMETWQAPACFP*PSWGVS
Trigger: AGAGACACCCCAGGAAGGTCAGGGAAAGCAGGCAGG...GGCCTGCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp CAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGCCTGCCTGCTTTCCCTaGCCTTCCTGGGGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: QPDHILCHCLQGVRNGTWPACFP*PSWGVS
Trigger: AGAGACACCCCAGGAAGGTCAGGGAAAGCAGGCAGG...CCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp CATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTTCTTGGCCTCGGGCTaGCTCTCCTCGAGATCCCAA +
Preference number: 4 (lower is better)
Translates to: HKAVCWLGRLQPDHILCHFLASG*LSSRSQ
Trigger: TTGGGATCTCGAGGAGAGTCAGCCCGAGGCCAAGAA...ATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp GCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTGTTCATCTCCTCAGTaGGGACAGGTGAAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: AGWGGYSLTTFFAIAYKGCSSPQ*GQVKRP
Trigger: AGGCCTTTTCACCTGTCCTCACTGAGGAGATGAACA...CCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp CACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCTTCCTGGCAGCAGGATaGGGCAGAGAGTGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: HILCHCLQGVRNGTWKHGFLAAG*GRECPG
Trigger: GCCCGGGCACTCTCTGCCTCATCCTGCTGCCAGGAA...GCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAGCTTATTTGGGGCCTaGCTGCTTTCCCTGACCTTC +
Preference number: 4 (lower is better)
Translates to: LSAGWGGYSLTTFFAIAYSLFGA*LLSLTF
Trigger: GAAGGTCAGGGAAAGCAGGCAGGCCCCAAATAAGCT...GTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACTTTCATCGCCTCAGCTaGCCCGACCAGCTTATTTGG +
Preference number: 4 (lower is better)
Translates to: LSAGWGGYSLTTFFAIAYFHRLS*PDQLIW
Trigger: CCAAATAAGCTGGTCGGGGCAGCTGAGGCGATGAAA...GTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp TCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTTAGGGCATGCCTaGCTTTCAGCTTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SAGWGGYSLTTFFAIAYKGLGHA*LSASSP
Trigger: AGGACTGGAAGCTGAAAGGCAGGCATGCCCTAACCC...CTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp TTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCTGGGGGTTAGGGCATaGCTGCCTTTCAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FHKAVCWLGRLQPDHILCLGVRA*LPFSFQ
Trigger: CTGGAAGCTGAAAGGCAGGCATGCCCTAACCCCCAG...GCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp TCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATAAGCGGGCTTTCTTaGCCTCGGGCTGACTCTCCT +
Preference number: 4 (lower is better)
Translates to: SIKLSAGWGGYSLTTFFAISGLS*PRADSP
Trigger: AGGAGAGTCAGCCCGAGGCCAAGAAAGCCCGCTTAT...GGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp ACATGGCAGGCCGACTCACGAACACAGGCCTGGGCCAGCGCTTTCTTCTTCCTCTCACACAGCTGGTCATaGGTTACTTCACAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: TWQADSRTQAWASAFFFLSHSWS*VTSQLS
Trigger: TGACAACTGTGAAGTAACCCATGACCAGCTGTGTGA...GAGGAAGAAGAAAGCGCTGGCCCAGGCCTGTGTTCGTGAGTCGGCCTGCCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR TCA 90 bp CTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACACCTGCCTGCTTTCCCTaGCCTTCCTGGGGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LQPDHILCHCLQGVRNGTPACFP*PSWGVS
Trigger: AGAGACACCCCAGGAAGGTCAGGGAAAGCAGGCAGG...TGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp CACTGGGTTAAGAATCTTCTTCGTGATTCCCGAAAAGCTGGTGAGGTAGTCCAGCCTGCCTGCTTTCCCTaGCCTTCCTGGGGTGTCTCT +
Preference number: 4 (lower is better)
Translates to: HWVKNLLRDSRKAGEVVQPACFP*PSWGVS
Trigger: AGAGACACCCCAGGAAGGTCAGGGAAAGCAGGCAGG...CTGGACTACCTCACCAGCTTTTCGGGAATCACGAAGAAGATTCTTAACCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR TCA 90 bp TGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGTCTTCTGTGGCATCATaGCCAAGTCTGTCTGGACAC +
Preference number: 4 (lower is better)
Translates to: CWLGRLQPDHILCHCLQGSSVAS*PSLSGH
Trigger: GTGTCCAGACAGACTTGGTCATGATGCCACAGAAGA...CCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp TCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGTGTCACAATCAAGCGTaGGCTCTGTCACAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SAGWGGYSLTTFFAIAYKCHNQA*ALSQAS
Trigger: AGAGGCCTGTGACAGAGCTCACGCTTGATTGTGACA...CTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp TTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCGGGGAGGCTACAGCCTaGCCACATTCTTTGCCATTG +
Preference number: 4 (lower is better)
Translates to: FHKAVCWLGRLQPDHILCGEATA*PHSLPL
Trigger: CAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCC...GCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp AAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCACAGGCCTCTGCACCTaGCGGGTTTCAAGAACAAAA +
Preference number: 4 (lower is better)
Translates to: KLSAGWGGYSLTTFFAIATGLCT*RVSRTK
Trigger: TTTTGTTCTTGAAACCCGTCAGGTGCAGAGGCCTGT...GGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000348433.10
CDS-3UTR GCA 90 bp CTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACAAAAGAAGGAAGGTGCTaGCGAGCGGCTTCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: LQPDHILCHCLQGVRNGTKEGRC*RAASPP
Trigger: AGGCGGCGAAGCCGCTCGGCAGCACCTTCCTTCTTT...TGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAAGGCAAAGAAGGAAGGTaGTGCCGAGCGGCTTCGCCG +
Preference number: 4 (lower is better)
Translates to: PDHILCHCLQGVRNGTWKGKEGR*CRAASP
Trigger: CGGCGAAGCCGCTCGGCAGCACCTTCCTTCTTTGCC...TTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATGCTACAACGGGCGTCTaGCTGGCAAAGAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: HKAVCWLGRLQPDHILCHATTGV*LAKKEG
Trigger: ACCTTCCTTCTTTGCCAGGCAGACGCCCGTTGTAGC...ATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp TCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGCAGCAACCAGTGAGATaGGTGTTAGCTCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SAGWGGYSLTTFFAIAYKQQPVR*VLALSP
Trigger: AGGGGAGAGAGCTAACACGCATCTCACTGGTTGCTG...CTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAAGCTCCAGCGCCAGGCTaGTATCTTCGGGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: PDHILCHCLQGVRNGTWKAPAPG*YLRVVQ
Trigger: CTGGACCACCCGAAGATAGCAGCCTGGCGCTGGAGC...TTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp TCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCAGGCCGGTCCCTTCCCTCTCTaGCTCCATGGCGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: SLPLPTRGKKWHMETWQAGPFPL*LHGGFS
Trigger: TGAGAATCCGCCATGGAGCCAGAGAGGGAAGGGACC...GGCCTGCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp AGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCCCCGACCAGCTTATTTaGGGCCTGCCTGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: RLQPDHILCHCLQGVRNGPDQLI*GLPAFP
Trigger: AGGGAAAGCAGGCAGGCCCCAAATAAGCTGGTCGGG...GCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp TGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGCACCAGCTGGGTTTTaGAACATTGGATTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: CWLGRLQPDHILCHCLQGAPAGF*NIGFAQ
Trigger: CTGGGCAAATCCAATGTTCCAAAACCCAGCTGGTGC...CCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000348433.10
CDS-3UTR CCA 90 bp CTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACGCCCTTCCATTGTCTTaGGCAGATCTCCAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: LSAGWGGYSLTTFFAIAYALPLS*ADLQLF
Trigger: AAAGAGCTGGAGATCTGCCCAAGACAATGGAAGGGC...GTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp TGTAGCCCAACAACATCAGCTAGAAAATCAGATGATGGTGGAGGCAAGCGGAATAGGCATGGAGGTGCCTaGGGGTTAGGGCATGCCTGC +
Preference number: 4 (lower is better)
Translates to: CSPTTSARKSDDGGGKRNRHGGA*GLGHAC
Trigger: GCAGGCATGCCCTAACCCCCAGGCACCTCCATGCCT...ATTCCGCTTGCCTCCACCATCATCTGATTTTCTAGCTGATGTTGTTGGGCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CCA 90 bp AAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCGCTGCTATCTTCGGGTaGTCCAGTTTCAGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: KAVCWLGRLQPDHILCHCAAIFG*SSFRVC
Trigger: GCAGACTCTGAAACTGGACCACCCGAAGATAGCAGC...GCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp CATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTCACGAACACAGGCCTaGGCCAGCGCTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HKAVCWLGRLQPDHILCHSRTQA*ASAFFF
Trigger: GAAGAAGAAAGCGCTGGCCCAGGCCTGTGTTCGTGA...ATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp AAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCTGGCACATGGAAACATaGCAGGCCGACTCACGAACA +
Preference number: 4 (lower is better)
Translates to: KAVCWLGRLQPDHILCHCWHMET*QADSRT
Trigger: TGTTCGTGAGTCGGCCTGCCATGTTTCCATGTGCCA...GCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp AGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCAAGCTGTCTGCTGGTTaGGGAGGCTACAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: RLQPDHILCHCLQGVRNGKLSAG*GGYSLT
Trigger: GGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTT...GCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp CAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAGCTGTCTGCTGGTTaGGGAGGCTACAGCCTGACC +
Preference number: 4 (lower is better)
Translates to: QPDHILCHCLQGVRNGTWKLSAG*GGYSLT
Trigger: GGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTT...CCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp GTGAAACGTTCTCATTTCCTCCTTTGTCAGAAGGCATCTGGTCAAGCCCACTTTGGTCCCTTCCCTCTCTaGCTCCATGGCGTCCGCATC +
Preference number: 4 (lower is better)
Translates to: VKRSHFLLCQKASGQAHFGPFPL*LHGVRI
Trigger: GATGCGGACGCCATGGAGCCAGAGAGGGAAGGGACC...AAAGTGGGCTTGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAACGTTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566518.5
CDS-3UTR TCA 90 bp AAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTTCCCGAAAAGCTGGTaGGGTAGTCCAGAATCTTGT +
Preference number: 4 (lower is better)
Translates to: KLSAGWGGYSLTTFFAIAFPKSW*GSPESC
Trigger: ACAAGATTCTGGACTACCTCACCAGCTTTTCGGGAA...GGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp TCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGCCTCTGTACATCTTTaGGTTTGGTCGTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: SAGWGGYSLTTFFAIAYKASVHL*VWSSLG
Trigger: ACCCAGTGACGACCAAACTCAAAGATGTACAGAGGC...CTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp TCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCTCTTCTGTGGCATCATaGCCAAGTCTGTCTGGACAC +
Preference number: 4 (lower is better)
Translates to: SIKLSAGWGGYSLTTFFASSVAS*PSLSGH
Trigger: GTGTCCAGACAGACTTGGTCATGATGCCACAGAAGA...GGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp CTGCCTCTGTACATCTTTGAGTTTGGTCGTCACTGGGTTAAGAATCTTCTTCGTCAGGTGGTAAGCCTCTaGGCCAGGCATGGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: LPLYIFEFGRHWVKNLLRQVVSL*ARHGGA
Trigger: GGCACCTCCATGCCTGGCTCAGAGGCTTACCACCTG...ACGAAGAAGATTCTTAACCCAGTGACGACCAAACTCAAAGATGTACAGAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR TCA 90 bp AGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCCCAGAGAGTGAACCATaGGTGCTCTTGGTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: RLQPDHILCHCLQGVRNGPESEP*VLLVPG
Trigger: GCCAGGAACCAAGAGCACTCATGGTTCACTCTCTGG...GCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp AGTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTGGGGAGGCTACAGCCTaGCCACATTCTTTGCCATTG +
Preference number: 4 (lower is better)
Translates to: SFHKAVCWLGRLQPDHILGEATA*PHSLPL
Trigger: CAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCC...AAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp TCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCAGGCCGCTACAACGGGCGTCTaGCTGGCAAAGAAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: SLPLPTRGKKWHMETWQAATTGV*LAKKEG
Trigger: ACCTTCCTTCTTTGCCAGGCAGACGCCCGTTGTAGC...GGCCTGCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp TCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCAGAATGTTGAGGGCCTaGTGGGCACTGCCAAAACTT +
Preference number: 4 (lower is better)
Translates to: SIKLSAGWGGYSLTTFFARMLRA*WALPKL
Trigger: AAGTTTTGGCAGTGCCCAGCAGGCCCTCAACATTCT...GGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACTCCAGTTTCAGAGTCTaGAAGGCCTCCTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: LSAGWGGYSLTTFFAIAYSSFRV*KASCSK
Trigger: CTTTGAACAGGAGGCCTTGCAGACTCTGAAACTGGA...GTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp TCTAGCATCTTCTGTGGCATCATGACCAAGTCTGTCTGGACACTGTATATCCTTGCTCCAGCGCCAGGCTaGTATCTTCGGGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: SSIFCGIMTKSVWTLYILAPAPG*YLRVVQ
Trigger: CTGGACCACCCGAAGATAGCAGCCTGGCGCTGGAGC...AAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATGCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CCA 90 bp AGAATACCATCCAAGGATTCTATGGCCAGCTGGGCAGCTTCTAGGACTTCATACCCCGACCAGCTTATTTaGGGCCTGCCTGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: RIPSKDSMASWAASRTSYPDQLI*GLPAFP
Trigger: AGGGAAAGCAGGCAGGCCCCAAATAAGCTGGTCGGG...GTATGAAGTCCTAGAAGCTGCCCAGCTGGCCATAGAATCCTTGGATGGTATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CCA 90 bp GCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGATGACCAAGTCTGTCTaGACACTGTATATCCTTCCC +
Preference number: 4 (lower is better)
Translates to: AGWGGYSLTTFFAIAYKGMTKSV*TLYILP
Trigger: GGGAAGGATATACAGTGTCCAGACAGACTTGGTCAT...CCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp CATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATGGGGGATTTCCACTCTaGCCTGCTCAAGAACCTCTT +
Preference number: 4 (lower is better)
Translates to: HKAVCWLGRLQPDHILCHGGFPL*PAQEPL
Trigger: AAGAGGTTCTTGAGCAGGCCAGAGTGGAAATCCCCC...ATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp AGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCTCACGAACACAGGCCTaGGCCAGCGCTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RLQPDHILCHCLQGVRNGSRTQA*ASAFFF
Trigger: GAAGAAGAAAGCGCTGGCCCAGGCCTGTGTTCGTGA...GCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp AACAATGCTGAAGGGAAACAGGGGGATTTCCACTCTGGCCTGCTCAAGAACCTCTGGCACATGGAAACATaGCAGGCCGACTCACGAACA +
Preference number: 4 (lower is better)
Translates to: NNAEGKQGDFHSGLLKNLWHMET*QADSRT
Trigger: TGTTCGTGAGTCGGCCTGCCATGTTTCCATGTGCCA...GAGGTTCTTGAGCAGGCCAGAGTGGAAATCCCCCTGTTTCCCTTCAGCATTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR TCA 90 bp GCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGAGCCATACTTTTGAATaGTGGGATCATCCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: AGWGGYSLTTFFAIAYKGSHTFE*WDHPEG
Trigger: ACCTTCAGGATGATCCCATCATTCAAAAGTATGGCT...CCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp CATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATCTCTCCCCTTGGATGTaGGGCACATTTCACAGTCAA +
Preference number: 4 (lower is better)
Translates to: HKAVCWLGRLQPDHILCHLSPWM*GTFHSQ
Trigger: TTGACTGTGAAATGTGCCTCACATCCAAGGGGAGAG...ATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000348433.10
CDS-3UTR TCA 90 bp GCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGGCCTTAAAAGAGAACTaGACAATGCTGAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: AGWGGYSLTTFFAIAYKGALKEN*TMLKGN
Trigger: GTTTCCCTTCAGCATTGTTCAGTTCTCTTTTAAGGC...CCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp CTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACCTCAGTGAGGACAGGTaGAAAGGCCTTAAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: LSAGWGGYSLTTFFAIAYLSEDR*KGLKRE
Trigger: TTCTCTTTTAAGGCCTTTTCACCTGTCCTCACTGAG...GTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp CTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGAACAAAAGTCATTaGCTGGACTGGGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LSAGWGGYSLTTFFAIAYKNKSH*LDWAKA
Trigger: AGCTTTGGCCCAGTCCAGTCAATGACTTTTGTTCTT...GTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp AGTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTCAGGCCTCTGCACCTTaGTGCAGATACCATCTACCA +
Preference number: 4 (lower is better)
Translates to: SFHKAVCWLGRLQPDHILQASAP*CRYHLP
Trigger: TGGTAGATGGTATCTGCATCAAGGTGCAGAGGCCTG...AAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000566993.5
CDS-3UTR TCA 90 bp CTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACACCAGAGAGTGAACCATaGGTGCTCTTGGTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LQPDHILCHCLQGVRNGTPESEP*VLLVPG
Trigger: GCCAGGAACCAAGAGCACTCATGGTTCACTCTCTGG...TGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATAAGAGGCGGGGCTCCTaGAATAGCTGTTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: HKAVCWLGRLQPDHILCHKRRGS*NSCSLK
Trigger: CTTCAAAGAACAGCTATTGCAGGAGCCCCGCCTCTT...ATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACAGGGTTAGGGCATGCCTaGCTTTCAGCTTCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: LQPDHILCHCLQGVRNGTGLGHA*LSASSP
Trigger: AGGACTGGAAGCTGAAAGGCAGGCATGCCCTAACCC...TGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCCTGGGGGTTAGGGCATaGCTGCCTTTCAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: HILCHCLQGVRNGTWKHGLGVRA*LPFSFQ
Trigger: CTGGAAGCTGAAAGGCAGGCATGCCCTAACCCCCAG...GCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp GAAAGTGAAACGTTCTCATTTCCTCCTTTGTCAGAAGGCATCTGGTCAAGCCCACAACGGGCGTCTGCCTaGCAAAGAAGGAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: ESETFSFPPLSEGIWSSPQRASA*QRRKVL
Trigger: CAGCACCTTCCTTCTTTGCCAGGCAGACGCCCGTTG...TGGGCTTGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAACGTTTCACTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CCA 90 bp TGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGAGCAATTCACACAGCTaGTCATGGGTTACTTCACAG +
Preference number: 4 (lower is better)
Translates to: CWLGRLQPDHILCHCLQGSNSHS*SWVTSQ
Trigger: CTGTGAAGTAACCCATGACCAGCTGTGTGAATTGCT...CCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp TTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCGCACCAGCTGGGTTTTaGAACATTGGATTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: FHKAVCWLGRLQPDHILCAPAGF*NIGFAQ
Trigger: CTGGGCAAATCCAATGTTCCAAAACCCAGCTGGTGC...GCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000348433.10
CDS-3UTR CCA 90 bp AAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTCCAAATCTAAGGAGTaGCCCACTAACACAGCATCA +
Preference number: 4 (lower is better)
Translates to: KLSAGWGGYSLTTFFAIASKSKE*PTNTAS
Trigger: TGATGCTGTGTTAGTGGGCCACTCCTTAGATTTGGA...GGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp CACAGGCCTCTGCACCTTGATGCAGATACCATCTACCAGAATACCATCCAAGGAGGGGGATTTCCACTCTaGCCTGCTCAAGAACCTCTT +
Preference number: 4 (lower is better)
Translates to: HRPLHLDADTIYQNTIQGGGFPL*PAQEPL
Trigger: AAGAGGTTCTTGAGCAGGCCAGAGTGGAAATCCCCC...TCCTTGGATGGTATTCTGGTAGATGGTATCTGCATCAAGGTGCAGAGGCCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CCA 90 bp TTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATCCAAGGATTCTATaGCCAGCTGGGCAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: FHKAVCWLGRLQPDHILCHPRIL*PAGQLL
Trigger: TAGAAGCTGCCCAGCTGGCCATAGAATCCTTGGATG...GCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000566993.5
CDS-3UTR CCA 90 bp CATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATATGTTGAGGGCCTGCTaGGCACTGCCAAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: HKAVCWLGRLQPDHILCHMLRAC*ALPKLL
Trigger: CAAAAGTTTTGGCAGTGCCCAGCAGGCCCTCAACAT...ATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp TTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCATGTTGAGGGCCTGCTaGGCACTGCCAAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: FHKAVCWLGRLQPDHILCMLRAC*ALPKLL
Trigger: CAAAAGTTTTGGCAGTGCCCAGCAGGCCCTCAACAT...GCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp TCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCAGGCCGCTGCTATCTTCGGGTaGTCCAGTTTCAGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: SLPLPTRGKKWHMETWQAAAIFG*SSFRVC
Trigger: GCAGACTCTGAAACTGGACCACCCGAAGATAGCAGC...GGCCTGCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp AGTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGGCACATGGAAACATaGCAGGCCGACTCACGAACA +
Preference number: 4 (lower is better)
Translates to: SFHKAVCWLGRLQPDHILWHMET*QADSRT
Trigger: TGTTCGTGAGTCGGCCTGCCATGTTTCCATGTGCCA...AAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp AAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCGTAAGAAATGGCACATaGAAACATGGCAGGCCGACT +
Preference number: 4 (lower is better)
Translates to: KAVCWLGRLQPDHILCHCVRNGT*KHGRPT
Trigger: AGTCGGCCTGCCATGTTTCCATGTGCCATTTCTTAC...GCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp TTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCATGATGGGATCATCCTaGAGGTTGATGGCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: FHKAVCWLGRLQPDHILCMMGSS*RLMAAF
Trigger: AAAAGCCGCCATCAACCTTCAGGATGATCCCATCAT...GCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp TGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGAGCCATACTTTTGAATaGTGGGATCATCCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: CWLGRLQPDHILCHCLQGSHTFE*WDHPEG
Trigger: ACCTTCAGGATGATCCCATCATTCAAAAGTATGGCT...CCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp AGTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTGCCTCTGTACATCTTTaGGTTTGGTCGTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: SFHKAVCWLGRLQPDHILASVHL*VWSSLG
Trigger: ACCCAGTGACGACCAAACTCAAAGATGTACAGAGGC...AAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp TCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGCTTGTGTTTGGGTGCTaGAGTACTTCTGCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: SAGWGGYSLTTFFAIAYKLVFGC*STSAVF
Trigger: AAACACAGCAGAAGTACTTCAGCACCCAAACACAAG...CTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp TCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGAGAACTGAACAATGCTaGAGGGAAACAGGGGGATTT +
Preference number: 4 (lower is better)
Translates to: SAGWGGYSLTTFFAIAYKRTEQC*RETGGF
Trigger: AAATCCCCCTGTTTCCCTTCAGCATTGTTCAGTTCT...CTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp TCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCCTCAGTGAGGACAGGTaGAAAGGCCTTAAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SIKLSAGWGGYSLTTFFALSEDR*KGLKRE
Trigger: TTCTCTTTTAAGGCCTTTTCACCTGTCCTCACTGAG...GGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp AGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCTGTTCATCTCCTCAGTaGGGACAGGTGAAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RLQPDHILCHCLQGVRNGCSSPQ*GQVKRP
Trigger: AGGCCTTTTCACCTGTCCTCACTGAGGAGATGAACA...GCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp CAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGTGTTCATCTCCTCAGTaGGGACAGGTGAAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: QPDHILCHCLQGVRNGTWCSSPQ*GQVKRP
Trigger: AGGCCTTTTCACCTGTCCTCACTGAGGAGATGAACA...CCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp CTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACACAGGCCTCTGCACCTTaGTGCAGATACCATCTACCA +
Preference number: 4 (lower is better)
Translates to: LQPDHILCHCLQGVRNGTQASAP*CRYHLP
Trigger: TGGTAGATGGTATCTGCATCAAGGTGCAGAGGCCTG...TGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000566993.5
CDS-3UTR TCA 90 bp CTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGTCACAATCAAGCGTaGGCTCTGTCACAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LQPDHILCHCLQGVRNGTCHNQA*ALSQAS
Trigger: AGAGGCCTGTGACAGAGCTCACGCTTGATTGTGACA...TGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp TCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGCAATAGCTGTTCTTTaGAGGTTTCACTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: SAGWGGYSLTTFFAIAYKAIAVL*RFHSLQ
Trigger: CTGGAGTGAGTGAAACCTTCAAAGAACAGCTATTGC...CTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACAAGCTTATTTGGGGCCTaGCTGCTTTCCCTGACCTTC +
Preference number: 4 (lower is better)
Translates to: LQPDHILCHCLQGVRNGTSLFGA*LLSLTF
Trigger: GAAGGTCAGGGAAAGCAGGCAGGCCCCAAATAAGCT...TGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATTTCATCGCCTCAGCTaGCCCGACCAGCTTATTTGG +
Preference number: 4 (lower is better)
Translates to: LQPDHILCHCLQGVRNGTFHRLS*PDQLIW
Trigger: CCAAATAAGCTGGTCGGGGCAGCTGAGGCGATGAAA...TGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp TCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCAGGCTCTTGGCCTGCTaGTTGTATTTCTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: SIKLSAGWGGYSLTTFFARLLAC*LYFLVI
Trigger: AATCACCAAGAAATACAAGCAGCAGGCCAAGAGCCT...GGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAGAGGCGGGGCTCCTaGAATAGCTGTTCTTTGAAG +
Preference number: 4 (lower is better)
Translates to: QPDHILCHCLQGVRNGTWKRRGS*NSCSLK
Trigger: CTTCAAAGAACAGCTATTGCAGGAGCCCCGCCTCTT...CCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp TTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCTCCAGTTTCAGAGTCTaGAAGGCCTCCTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: FHKAVCWLGRLQPDHILCSSFRV*KASCSK
Trigger: CTTTGAACAGGAGGCCTTGCAGACTCTGAAACTGGA...GCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp CTCCTTTGTCAGAAGGCATCTGGTCAAGCCCACTTTCTTAGAGCCATACTTTTGATAAGCGGGCTTTCTTaGCCTCGGGCTGACTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLCQKASGQAHFLRAILLISGLS*PRADSP
Trigger: AGGAGAGTCAGCCCGAGGCCAAGAAAGCCCGCTTAT...CAAAAGTATGGCTCTAAGAAAGTGGGCTTGACCAGATGCCTTCTGACAAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR CCA 90 bp TCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCAGCAATTCACACAGCTaGTCATGGGTTACTTCACAG +
Preference number: 4 (lower is better)
Translates to: SIKLSAGWGGYSLTTFFASNSHS*SWVTSQ
Trigger: CTGTGAAGTAACCCATGACCAGCTGTGTGAATTGCT...GGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp TCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCAAAGCTGGCACCAGCTaGGTTTTGGAACATTGGATT +
Preference number: 4 (lower is better)
Translates to: SIKLSAGWGGYSLTTFFAKAGTS*VLEHWI
Trigger: AATCCAATGTTCCAAAACCCAGCTGGTGCCAGCTTT...GGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000348433.10
CDS-3UTR CCA 90 bp GTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCCTTCCATTGTCTTaGGCAGATCTCCAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: VSIKLSAGWGGYSLTTFFALPLS*ADLQLF
Trigger: AAAGAGCTGGAGATCTGCCCAAGACAATGGAAGGGC...AAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp AAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCGAGTTTGGTCGTCACTaGGTTAAGAATCTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: KLSAGWGGYSLTTFFAIAEFGRH*VKNLLR
Trigger: ACGAAGAAGATTCTTAACCCAGTGACGACCAAACTC...GGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp CCTCCTTCAGCAACCAGTGAGATGCGTGTTAGCTCTCTCCCCTTGGATGTGAGGGAGTTTGGTCGTCACTaGGTTAAGAATCTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: PPSATSEMRVSSLPLDVREFGRH*VKNLLR
Trigger: ACGAAGAAGATTCTTAACCCAGTGACGACCAAACTC...CCTCACATCCAAGGGGAGAGAGCTAACACGCATCTCACTGGTTGCTGAAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR CCA 90 bp TCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGATGACCAAGTCTGTCTaGACACTGTATATCCTTCCC +
Preference number: 4 (lower is better)
Translates to: SAGWGGYSLTTFFAIAYKMTKSV*TLYILP
Trigger: GGGAAGGATATACAGTGTCCAGACAGACTTGGTCAT...CTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp AGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCGATTCTATGGCCAGCTaGGCAGCTTCTAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: RLQPDHILCHCLQGVRNGDSMAS*AASRTS
Trigger: TGAAGTCCTAGAAGCTGCCCAGCTGGCCATAGAATC...GCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000566993.5
CDS-3UTR CCA 90 bp CAGAAGGCATCTGGTCAAGCCCACTTTCTTAGAGCCATACTTTTGAATGATGGGTCACGAACACAGGCCTaGGCCAGCGCTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QKASGQAHFLRAILLNDGSRTQA*ASAFFF
Trigger: GAAGAAGAAAGCGCTGGCCCAGGCCTGTGTTCGTGA...CCCATCATTCAAAAGTATGGCTCTAAGAAAGTGGGCTTGACCAGATGCCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CCA 90 bp TTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCGTAAGAAATGGCACATaGAAACATGGCAGGCCGACT +
Preference number: 4 (lower is better)
Translates to: FHKAVCWLGRLQPDHILCVRNGT*KHGRPT
Trigger: AGTCGGCCTGCCATGTTTCCATGTGCCATTTCTTAC...GCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
3UTR CAA 72 bp TCAGCAACCAGTGAGATGCGTGTTAGCTCTCTCCCCTaGGATGTGAGGCACATTTCACAGTCAAGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SATSEMRVSSLP*DVRHISQSSPK
Trigger: CTTTGGACTTGACTGTGAAATGTGCCTCACATCCAAGGGGAGAGAGCTAACACGCATCTCACTGGTTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566518.5
CDS-3UTR TCA 90 bp CTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAGCGGAATTTATGTCTaGATGCTTTTCGAAGACATC +
Preference number: 4 (lower is better)
Translates to: LSAGWGGYSLTTFFAIAYSGIYV*MLFEDI
Trigger: GATGTCTTCGAAAAGCATTCAGACATAAATTCCGCT...GTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp GTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTATGATGGGATCATCCTaGAGGTTGATGGCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: VSIKLSAGWGGYSLTTFFMMGSS*RLMAAF
Trigger: AAAAGCCGCCATCAACCTTCAGGATGATCCCATCAT...AAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp TCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCCCTTGTAATGGAAAGTaGAACGTTCTCATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SIKLSAGWGGYSLTTFFAPCNGK*NVLISS
Trigger: GGAGGAAATGAGAACGTTTCACTTTCCATTACAAGG...GGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000348433.10
CDS-3UTR TCA 90 bp AGTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTTCCCGAAAAGCTGGTaGGGTAGTCCAGAATCTTGT +
Preference number: 4 (lower is better)
Translates to: SFHKAVCWLGRLQPDHILFPKSW*GSPESC
Trigger: ACAAGATTCTGGACTACCTCACCAGCTTTTCGGGAA...AAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp CATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATCTTGTGTTTGGGTGCTaGAGTACTTCTGCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: HKAVCWLGRLQPDHILCHLVFGC*STSAVF
Trigger: AAACACAGCAGAAGTACTTCAGCACCCAAACACAAG...ATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CGTTCTCATTTCCTCCTTTGTCAGAAGGCATCTGGTCAAGCCCACTTTCTTAGAAGCTTATTTGGGGCCTaGCTGCTTTCCCTGACCTTC +
Preference number: 4 (lower is better)
Translates to: RSHFLLCQKASGQAHFLRSLFGA*LLSLTF
Trigger: GAAGGTCAGGGAAAGCAGGCAGGCCCCAAATAAGCT...TCTAAGAAAGTGGGCTTGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR GCA 90 bp CCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAATTTCATCGCCTCAGCTaGCCCGACCAGCTTATTTGG +
Preference number: 4 (lower is better)
Translates to: PDHILCHCLQGVRNGTWKFHRLS*PDQLIW
Trigger: CCAAATAAGCTGGTCGGGGCAGCTGAGGCGATGAAA...TTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp GTGAAACGTTCTCATTTCCTCCTTTGTCAGAAGGCATCTGGTCAAGCCCACTTTTTTCATCGCCTCAGCTaGCCCGACCAGCTTATTTGG +
Preference number: 4 (lower is better)
Translates to: VKRSHFLLCQKASGQAHFFHRLS*PDQLIW
Trigger: CCAAATAAGCTGGTCGGGGCAGCTGAGGCGATGAAA...AAAGTGGGCTTGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAACGTTTCAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR GCA 90 bp TCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCGGATTTGCCCAGAACTaGATACTTCAGCAATTCACA +
Preference number: 4 (lower is better)
Translates to: SIKLSAGWGGYSLTTFFAGFAQN*ILQQFT
Trigger: TGTGAATTGCTGAAGTATGCAGTTCTGGGCAAATCC...GGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CCTCCTTCAGCAACCAGTGAGATGCGTGTTAGCTCTCTCCCCTTGGATGTGAGGTTGGAACATTGGATTTaGCCAGAACTGCATACTTCA +
Preference number: 4 (lower is better)
Translates to: PPSATSEMRVSSLPLDVRLEHWI*PELHTS
Trigger: TGAAGTATGCAGTTCTGGGCAAATCCAATGTTCCAA...CCTCACATCCAAGGGGAGAGAGCTAACACGCATCTCACTGGTTGCTGAAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR GCA 90 bp CCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACAGCAACCAGTGAGATaGGTGTTAGCTCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: PDHILCHCLQGVRNGTWKQQPVR*VLALSP
Trigger: AGGGGAGAGAGCTAACACGCATCTCACTGGTTGCTG...TTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp AGAGCCATACTTTTGAATGATGGGATCATCCTGAAGGTTGATGGCGGCTTTTGCCAGCAACCAGTGAGATaGGTGTTAGCTCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RAILLNDGIILKVDGGFCQQPVR*VLALSP
Trigger: AGGGGAGAGAGCTAACACGCATCTCACTGGTTGCTG...GCAAAAGCCGCCATCAACCTTCAGGATGATCCCATCATTCAAAAGTATGGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR GCA 90 bp AAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCATTTCCACTCTGGCCTaGTCAAGAACCTCTTTATTT +
Preference number: 4 (lower is better)
Translates to: KLSAGWGGYSLTTFFAIAISTLA*SRTSLF
Trigger: AAATAAAGAGGTTCTTGAGCAGGCCAGAGTGGAAAT...GGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp AACTGCCTCTGTACATCTTTGAGTTTGGTCGTCACTGGGTTAAGAATCTTCTTCCTGGGGGTTAGGGCATaGCTGCCTTTCAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: NCLCTSLSLVVTGLRIFFLGVRA*LPFSFQ
Trigger: CTGGAAGCTGAAAGGCAGGCATGCCCTAACCCCCAG...GAAGAAGATTCTTAACCCAGTGACGACCAAACTCAAAGATGTACAGAGGCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR GCA 90 bp AGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCTCCAGTTTCAGAGTCTaGAAGGCCTCCTGTTCAAAG +
Preference number: 4 (lower is better)
Translates to: RLQPDHILCHCLQGVRNGSSFRV*KASCSK
Trigger: CTTTGAACAGGAGGCCTTGCAGACTCTGAAACTGGA...GCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp AAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCCACATTCTTTGCCATTaGCTACAAGGGGTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: KLSAGWGGYSLTTFFAIAHILCH*LQGVRN
Trigger: ATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG...GGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACCACATTCTTTGCCATTaGCTACAAGGGGTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: LSAGWGGYSLTTFFAIAYHILCH*LQGVRN
Trigger: ATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG...GTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp TCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCAGGCCCCTGACCACATTCTTTaGCATTGCCTACAAGGGGTA +
Preference number: 4 (lower is better)
Translates to: SLPLPTRGKKWHMETWQAPDHIL*HCLQGV
Trigger: TACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGG...GGCCTGCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp AGTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTCCTGACCACATTCTTTaGCATTGCCTACAAGGGGTA +
Preference number: 4 (lower is better)
Translates to: SFHKAVCWLGRLQPDHILPDHIL*HCLQGV
Trigger: TACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGG...AAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp GCCCACTTTCTTAGAGCCATACTTTTGAATGATGGGATCATCCTGAAGGTTGATCCCGACCAGCTTATTTaGGGCCTGCCTGCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: AHFLRAILLNDGIILKVDPDQLI*GLPAFP
Trigger: AGGGAAAGCAGGCAGGCCCCAAATAAGCTGGTCGGG...ATCAACCTTCAGGATGATCCCATCATTCAAAAGTATGGCTCTAAGAAAGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR CCA 90 bp CATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTCCAAATCTAAGGAGTaGCCCACTAACACAGCATCA +
Preference number: 4 (lower is better)
Translates to: HKAVCWLGRLQPDHILCHSKSKE*PTNTAS
Trigger: TGATGCTGTGTTAGTGGGCCACTCCTTAGATTTGGA...ATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp TGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGACAATTTCTGGAAGATaGAAGTTCACCAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: CWLGRLQPDHILCHCLQGTISGR*KFTSIC
Trigger: ACAGATGCTGGTGAACTTCCATCTTCCAGAAATTGT...CCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp TGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGACAAAAGTCATTGACTaGACTGGGCCAAAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: CWLGRLQPDHILCHCLQGTKVID*TGPKLL
Trigger: TAAAAGCTTTGGCCCAGTCCAGTCAATGACTTTTGT...CCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp AGAATACCATCCAAGGATTCTATGGCCAGCTGGGCAGCTTCTAGGACTTCATACATGTTGAGGGCCTGCTaGGCACTGCCAAAACTTTTG +
Preference number: 4 (lower is better)
Translates to: RIPSKDSMASWAASRTSYMLRAC*ALPKLL
Trigger: CAAAAGTTTTGGCAGTGCCCAGCAGGCCCTCAACAT...GTATGAAGTCCTAGAAGCTGCCCAGCTGGCCATAGAATCCTTGGATGGTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR TCA 90 bp TTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCAGCCATACTTTTGAATaGTGGGATCATCCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: FHKAVCWLGRLQPDHILCSHTFE*WDHPEG
Trigger: ACCTTCAGGATGATCCCATCATTCAAAAGTATGGCT...GCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp CACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCCTCTCCCCTTGGATGTaGGGCACATTTCACAGTCAA +
Preference number: 4 (lower is better)
Translates to: HILCHCLQGVRNGTWKHGLSPWM*GTFHSQ
Trigger: TTGACTGTGAAATGTGCCTCACATCCAAGGGGAGAG...GCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000348433.10
CDS-3UTR TCA 90 bp CATCTTCTGTGGCATCATGACCAAGTCTGTCTGGACACTGTATATCCTTCCCCATTCCCGAAAAGCTGGTaGGGTAGTCCAGAATCTTGT +
Preference number: 4 (lower is better)
Translates to: HLLWHHDQVCLDTVYPSPFPKSW*GSPESC
Trigger: ACAAGATTCTGGACTACCTCACCAGCTTTTCGGGAA...TGGGGAAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR TCA 90 bp CTCCTTTGTCAGAAGGCATCTGGTCAAGCCCACTTTCTTAGAGCCATACTTTTGGCCTCTGTACATCTTTaGGTTTGGTCGTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: LLCQKASGQAHFLRAILLASVHL*VWSSLG
Trigger: ACCCAGTGACGACCAAACTCAAAGATGTACAGAGGC...CAAAAGTATGGCTCTAAGAAAGTGGGCTTGACCAGATGCCTTCTGACAAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR TCA 90 bp TCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGTCATTTTCAGTGCTCTaGGATCCAAATCTAAGGAGT +
Preference number: 4 (lower is better)
Translates to: SAGWGGYSLTTFFAIAYKSFSVL*DPNLRS
Trigger: ACTCCTTAGATTTGGATCTCAGAGCACTGAAAATGA...CTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp CATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATGCCTTAAAAGAGAACTaGACAATGCTGAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: HKAVCWLGRLQPDHILCHALKEN*TMLKGN
Trigger: GTTTCCCTTCAGCATTGTTCAGTTCTCTTTTAAGGC...ATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp CAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAGAACAAAAGTCATTaGCTGGACTGGGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: QPDHILCHCLQGVRNGTWKNKSH*LDWAKA
Trigger: AGCTTTGGCCCAGTCCAGTCAATGACTTTTGTTCTT...CCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp TCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCAGGCCGCAATAGCTGTTCTTTaGAGGTTTCACTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: SLPLPTRGKKWHMETWQAAIAVL*RFHSLQ
Trigger: CTGGAGTGAGTGAAACCTTCAAAGAACAGCTATTGC...GGCCTGCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp TCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCTTGGAACATTGGATTTaGCCAGAACTGCATACTTCA +
Preference number: 4 (lower is better)
Translates to: SIKLSAGWGGYSLTTFFALEHWI*PELHTS
Trigger: TGAAGTATGCAGTTCTGGGCAAATCCAATGTTCCAA...GGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCTCTGTCACAGGCCTCTaGACCTTGATGCAGATACCA +
Preference number: 4 (lower is better)
Translates to: HILCHCLQGVRNGTWKHGSVTGL*TLMQIP
Trigger: TGGTATCTGCATCAAGGTGCAGAGGCCTGTGACAGA...GCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000566993.5
CDS-3UTR GCA 90 bp GTGAAACGTTCTCATTTCCTCCTTTGTCAGAAGGCATCTGGTCAAGCCCACTTTTCTGTCACAGGCCTCTaGACCTTGATGCAGATACCA +
Preference number: 4 (lower is better)
Translates to: VKRSHFLLCQKASGQAHFSVTGL*TLMQIP
Trigger: TGGTATCTGCATCAAGGTGCAGAGGCCTGTGACAGA...AAAGTGGGCTTGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAACGTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CCA 90 bp AGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCTCACACAGCTGGTCATaGGTTACTTCACAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: RLQPDHILCHCLQGVRNGSHSWS*VTSQLS
Trigger: TGACAACTGTGAAGTAACCCATGACCAGCTGTGTGA...GCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp CAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAGCAATTCACACAGCTaGTCATGGGTTACTTCACAG +
Preference number: 4 (lower is better)
Translates to: QPDHILCHCLQGVRNGTWSNSHS*SWVTSQ
Trigger: CTGTGAAGTAACCCATGACCAGCTGTGTGAATTGCT...CCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp CATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGGGTTTTGGAACATTaGATTTGCCCAGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: HKAVCWLGRLQPDHILCHWVLEH*ICPELH
Trigger: ATGCAGTTCTGGGCAAATCCAATGTTCCAAAACCCA...ATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp AGTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTAAAGCTGGCACCAGCTaGGTTTTGGAACATTGGATT +
Preference number: 4 (lower is better)
Translates to: SFHKAVCWLGRLQPDHILKAGTS*VLEHWI
Trigger: AATCCAATGTTCCAAAACCCAGCTGGTGCCAGCTTT...AAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000348433.10
CDS-3UTR CCA 90 bp CACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCGCCCTTCCATTGTCTTaGGCAGATCTCCAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: HILCHCLQGVRNGTWKHGALPLS*ADLQLF
Trigger: AAAGAGCTGGAGATCTGCCCAAGACAATGGAAGGGC...GCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp CATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATGAGTTTGGTCGTCACTaGGTTAAGAATCTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: HKAVCWLGRLQPDHILCHEFGRH*VKNLLR
Trigger: ACGAAGAAGATTCTTAACCCAGTGACGACCAAACTC...ATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp CACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCGATTCTATGGCCAGCTaGGCAGCTTCTAGGACTTCA +
Preference number: 4 (lower is better)
Translates to: HILCHCLQGVRNGTWKHGDSMAS*AASRTS
Trigger: TGAAGTCCTAGAAGCTGCCCAGCTGGCCATAGAATC...GCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000566993.5
CDS-3UTR CCA 90 bp TGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGAGATATATAGAGCCTTaGTTTTCAGAATCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: CWLGRLQPDHILCHCLQGRYIEP*FSESPS
Trigger: GGAAGGAGATTCTGAAAACCAAGGCTCTATATATCT...CCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp AAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCAGATATATAGAGCCTTaGTTTTCAGAATCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KLSAGWGGYSLTTFFAIARYIEP*FSESPS
Trigger: GGAAGGAGATTCTGAAAACCAAGGCTCTATATATCT...GGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp CATCTTCTGTGGCATCATGACCAAGTCTGTCTGGACACTGTATATCCTTCCCCAAAAGGCCCTGGGTTTTaGAACATTGGATTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: HLLWHHDQVCLDTVYPSPKGPGF*NIGFAQ
Trigger: CTGGGCAAATCCAATGTTCCAAAACCCAGGGCCTTT...TGGGGAAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566518.5
CDS-3UTR TCA 90 bp CATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATAGCGGAATTTATGTCTaGATGCTTTTCGAAGACATC +
Preference number: 4 (lower is better)
Translates to: HKAVCWLGRLQPDHILCHSGIYV*MLFEDI
Trigger: GATGTCTTCGAAAAGCATTCAGACATAAATTCCGCT...ATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp TGTAGCCCAACAACATCAGCTAGAAAATCAGATGATGGTGGAGGCAAGCGGAATATGATGGGATCATCCTaGAGGTTGATGGCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: CSPTTSARKSDDGGGKRNMMGSS*RLMAAF
Trigger: AAAAGCCGCCATCAACCTTCAGGATGATCCCATCAT...ATTCCGCTTGCCTCCACCATCATCTGATTTTCTAGCTGATGTTGTTGGGCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR TCA 90 bp CAGAAGGCATCTGGTCAAGCCCACTTTCTTAGAGCCATACTTTTGAATGATGGGTTCCCGAAAAGCTGGTaGGGTAGTCCAGAATCTTGT +
Preference number: 4 (lower is better)
Translates to: QKASGQAHFLRAILLNDGFPKSW*GSPESC
Trigger: ACAAGATTCTGGACTACCTCACCAGCTTTTCGGGAA...CCCATCATTCAAAAGTATGGCTCTAAGAAAGTGGGCTTGACCAGATGCCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR TCA 90 bp TCTAGCATCTTCTGTGGCATCATGACCAAGTCTGTCTGGACACTGTATATCCTTTCTTCTGTGGCATCATaGCCAAGTCTGTCTGGACAC +
Preference number: 4 (lower is better)
Translates to: SSIFCGIMTKSVWTLYILSSVAS*PSLSGH
Trigger: GTGTCCAGACAGACTTGGTCATGATGCCACAGAAGA...AAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATGCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR TCA 90 bp CTGCCTCTGTACATCTTTGAGTTTGGTCGTCACTGGGTTAAGAATCTTCTTCGTTCTTCTGTGGCATCATaGCCAAGTCTGTCTGGACAC +
Preference number: 4 (lower is better)
Translates to: LPLYIFEFGRHWVKNLLRSSVAS*PSLSGH
Trigger: GTGTCCAGACAGACTTGGTCATGATGCCACAGAAGA...ACGAAGAAGATTCTTAACCCAGTGACGACCAAACTCAAAGATGTACAGAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR TCA 90 bp GCCCACTTTCTTAGAGCCATACTTTTGAATGATGGGATCATCCTGAAGGTTGATTGTCACAATCAAGCGTaGGCTCTGTCACAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: AHFLRAILLNDGIILKVDCHNQA*ALSQAS
Trigger: AGAGGCCTGTGACAGAGCTCACGCTTGATTGTGACA...ATCAACCTTCAGGATGATCCCATCATTCAAAAGTATGGCTCTAAGAAAGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR TCA 90 bp TCACTCACTCCAGACAGATATATAGAGCCTTGGTTTTCAGAATCTCCTTCCAGCCTCTCCCCTTGGATGTaGGGCACTTGTAATGGAAAG +
Preference number: 4 (lower is better)
Translates to: SLTPDRYIEPWFSESPSSLSPWM*GTCNGK
Trigger: CTTTCCATTACAAGTGCCTCACATCCAAGGGGAGAG...GCTGGAAGGAGATTCTGAAAACCAAGGCTCTATATATCTGTCTGGAGTGAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR GCA 90 bp GCCCACTTTCTTAGAGCCATACTTTTGAATGATGGGATCATCCTGAAGGTTGATAGCTTATTTGGGGCCTaGCTGCTTTCCCTGACCTTC +
Preference number: 4 (lower is better)
Translates to: AHFLRAILLNDGIILKVDSLFGA*LLSLTF
Trigger: GAAGGTCAGGGAAAGCAGGCAGGCCCCAAATAAGCT...ATCAACCTTCAGGATGATCCCATCATTCAAAAGTATGGCTCTAAGAAAGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR GCA 90 bp GTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGGATTTGCCCAGAACTaGATACTTCAGCAATTCACA +
Preference number: 4 (lower is better)
Translates to: VSIKLSAGWGGYSLTTFFGFAQN*ILQQFT
Trigger: TGTGAATTGCTGAAGTATGCAGTTCTGGGCAAATCC...AAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp AGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCGGATTTGCCCAGAACTaGATACTTCAGCAATTCACA +
Preference number: 4 (lower is better)
Translates to: RLQPDHILCHCLQGVRNGGFAQN*ILQQFT
Trigger: TGTGAATTGCTGAAGTATGCAGTTCTGGGCAAATCC...GCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp TGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGAGAGGACTATTGTCTaGTATAGAACCATTACATTT +
Preference number: 4 (lower is better)
Translates to: CWLGRLQPDHILCHCLQGERTIV*YRTITF
Trigger: AAATGTAATGGTTCTATAGCAGACAATAGTCCTCTC...CCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000348433.10
CDS-3UTR GCA 90 bp TGCTTAAGGAAATACCGAGCCAATTCAAGGATTGTTCTAGCATCTTCTGTGGCACAGCAACCAGTGAGATaGGTGTTAGCTCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: CLRKYRANSRIVLASSVAQQPVR*VLALSP
Trigger: AGGGGAGAGAGCTAACACGCATCTCACTGGTTGCTG...TGCCACAGAAGATGCTAGAACAATCCTTGAATTGGCTCGGTATTTCCTTAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR GCA 90 bp CATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATAGCAGTGCTTTTAACTaGCTCTGTACATCTTTGAGT +
Preference number: 4 (lower is better)
Translates to: HKAVCWLGRLQPDHILCHSSAFN*LCTSLS
Trigger: ACTCAAAGATGTACAGAGGCAGTTAAAAGCACTGCT...ATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp AACAATGCTGAAGGGAAACAGGGGGATTTCCACTCTGGCCTGCTCAAGAACCTCAGCAGTGCTTTTAACTaGCTCTGTACATCTTTGAGT +
Preference number: 4 (lower is better)
Translates to: NNAEGKQGDFHSGLLKNLSSAFN*LCTSLS
Trigger: ACTCAAAGATGTACAGAGGCAGTTAAAAGCACTGCT...GAGGTTCTTGAGCAGGCCAGAGTGGAAATCCCCCTGTTTCCCTTCAGCATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR GCA 90 bp CATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATATTTCCACTCTGGCCTaGTCAAGAACCTCTTTATTT +
Preference number: 4 (lower is better)
Translates to: HKAVCWLGRLQPDHILCHISTLA*SRTSLF
Trigger: AAATAAAGAGGTTCTTGAGCAGGCCAGAGTGGAAAT...ATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp GAGCTTAAATCTTCTGCCCTGCTCTCTGACATAAAGCAACGATGTATCAATAACATAAGCGGGCTTTCTTaGCCTCGGGCTGACTCTCCT +
Preference number: 4 (lower is better)
Translates to: ELKSSALLSDIKQRCINNISGLS*PRADSP
Trigger: AGGAGAGTCAGCCCGAGGCCAAGAAAGCCCGCTTAT...GTTATTGATACATCGTTGCTTTATGTCAGAGAGCAGGGCAGAAGATTTAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR CCA 90 bp GTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTTGGGTTTTGGAACATTaGATTTGCCCAGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: VSIKLSAGWGGYSLTTFFWVLEH*ICPELH
Trigger: ATGCAGTTCTGGGCAAATCCAATGTTCCAAAACCCA...AAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp CATCTTCTGTGGCATCATGACCAAGTCTGTCTGGACACTGTATATCCTTCCCCATCCAAATCTAAGGAGTaGCCCACTAACACAGCATCA +
Preference number: 4 (lower is better)
Translates to: HLLWHHDQVCLDTVYPSPSKSKE*PTNTAS
Trigger: TGATGCTGTGTTAGTGGGCCACTCCTTAGATTTGGA...TGGGGAAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR CCA 90 bp CTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACAATGACCAAGTCTGTCTaGACACTGTATATCCTTCCC +
Preference number: 4 (lower is better)
Translates to: LQPDHILCHCLQGVRNGTMTKSV*TLYILP
Trigger: GGGAAGGATATACAGTGTCCAGACAGACTTGGTCAT...TGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp TTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCACAATTTCTGGAAGATaGAAGTTCACCAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: FHKAVCWLGRLQPDHILCTISGR*KFTSIC
Trigger: ACAGATGCTGGTGAACTTCCATCTTCCAGAAATTGT...GCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp CTGCCTCTGTACATCTTTGAGTTTGGTCGTCACTGGGTTAAGAATCTTCTTCGTCATCCAAGGATTCTATaGCCAGCTGGGCAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: LPLYIFEFGRHWVKNLLRHPRIL*PAGQLL
Trigger: TAGAAGCTGCCCAGCTGGCCATAGAATCCTTGGATG...ACGAAGAAGATTCTTAACCCAGTGACGACCAAACTCAAAGATGTACAGAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CCA 90 bp TCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCAGATATATAGAGCCTTaGTTTTCAGAATCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SIKLSAGWGGYSLTTFFARYIEP*FSESPS
Trigger: GGAAGGAGATTCTGAAAACCAAGGCTCTATATATCT...GGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp TGTCAGAAGGCATCTGGTCAAGCCCACTTTCTTAGAGCCATACTTTTGAATGATGCTGCTATCTTCGGGTaGTCCAGTTTCAGAGTCTGC +
Preference number: 4 (lower is better)
Translates to: CQKASGQAHFLRAILLNDAAIFG*SSFRVC
Trigger: GCAGACTCTGAAACTGGACCACCCGAAGATAGCAGC...ATCATTCAAAAGTATGGCTCTAAGAAAGTGGGCTTGACCAGATGCCTTCTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR TCA 90 bp GAAATACCGAGCCAATTCAAGGATTGTTCTAGCATCTTCTGTGGCATCATGACCATGATGGGATCATCCTaGAGGTTGATGGCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: EIPSQFKDCSSIFCGIMTMMGSS*RLMAAF
Trigger: AAAAGCCGCCATCAACCTTCAGGATGATCCCATCAT...GGTCATGATGCCACAGAAGATGCTAGAACAATCCTTGAATTGGCTCGGTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR TCA 90 bp AGCATCTTCTGTGGCATCATGACCAAGTCTGTCTGGACACTGTATATCCTTCCCCCTTGTAATGGAAAGTaGAACGTTCTCATTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SIFCGIMTKSVWTLYILPPCNGK*NVLISS
Trigger: GGAGGAAATGAGAACGTTTCACTTTCCATTACAAGG...GGGAAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566518.5
CDS-3UTR TCA 90 bp CTGTACATCTTTGAGTTTGGTCGTCACTGGGTTAAGAATCTTCTTCGTGATTCCCTCTCCCCTTGGATGTaGGGCACATTTCACAGTCAA +
Preference number: 4 (lower is better)
Translates to: LYIFEFGRHWVKNLLRDSLSPWM*GTFHSQ
Trigger: TTGACTGTGAAATGTGCCTCACATCCAAGGGGAGAG...GGAATCACGAAGAAGATTCTTAACCCAGTGACGACCAAACTCAAAGATGTACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566518.5
CDS-3UTR TCA 90 bp AGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCTCATTTTCAGTGCTCTaGGATCCAAATCTAAGGAGT +
Preference number: 4 (lower is better)
Translates to: RLQPDHILCHCLQGVRNGSFSVL*DPNLRS
Trigger: ACTCCTTAGATTTGGATCTCAGAGCACTGAAAATGA...GCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp AGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCGCTTGTATTTCTTGGTaGTTAGCTAGTGCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: RLQPDHILCHCLQGVRNGACISW*LASASR
Trigger: TCTAGAAGCACTAGCTAATCACCAAGAAATACAAGC...GCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp GTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCTTGTATTTCTTGGTaGTTAGCTAGTGCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: VSIKLSAGWGGYSLTTFFACISW*LASASR
Trigger: TCTAGAAGCACTAGCTAATCACCAAGAAATACAAGC...AAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp CACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCAGAACTGAACAATGCTaGAGGGAAACAGGGGGATTT +
Preference number: 4 (lower is better)
Translates to: HILCHCLQGVRNGTWKHGRTEQC*RETGGF
Trigger: AAATCCCCCTGTTTCCCTTCAGCATTGTTCAGTTCT...GCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp TGGAAAGTGAAACGTTCTCATTTCCTCCTTTGTCAGAAGGCATCTGGTCAAGCCAGAACTGAACAATGCTaGAGGGAAACAGGGGGATTT +
Preference number: 4 (lower is better)
Translates to: WKVKRSHFLLCQKASGQARTEQC*RETGGF
Trigger: AAATCCCCCTGTTTCCCTTCAGCATTGTTCAGTTCT...GGCTTGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAACGTTTCACTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR TCA 90 bp CACTGGGTTAAGAATCTTCTTCGTGATTCCCGAAAAGCTGGTGAGGTAGTCCAGGCCTTAAAAGAGAACTaGACAATGCTGAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: HWVKNLLRDSRKAGEVVQALKEN*TMLKGN
Trigger: GTTTCCCTTCAGCATTGTTCAGTTCTCTTTTAAGGC...CTGGACTACCTCACCAGCTTTTCGGGAATCACGAAGAAGATTCTTAACCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR TCA 90 bp CGTGATTCCCGAAAAGCTGGTGAGGTAGTCCAGAATCTTGTTTTCAGGTTTGACCTCAGTGAGGACAGGTaGAAAGGCCTTAAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: RDSRKAGEVVQNLVFRFDLSEDR*KGLKRE
Trigger: TTCTCTTTTAAGGCCTTTTCACCTGTCCTCACTGAG...GTCAAACCTGAAAACAAGATTCTGGACTACCTCACCAGCTTTTCGGGAATCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR TCA 90 bp CACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCAAGAACAAAAGTCATTaGCTGGACTGGGCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: HILCHCLQGVRNGTWKHGKNKSH*LDWAKA
Trigger: AGCTTTGGCCCAGTCCAGTCAATGACTTTTGTTCTT...GCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCAGGCTCTTGGCCTGCTaGTTGTATTTCTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: HILCHCLQGVRNGTWKHGRLLAC*LYFLVI
Trigger: AATCACCAAGAAATACAAGCAGCAGGCCAAGAGCCT...GCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp GTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTATTTCCACTCTGGCCTaGTCAAGAACCTCTTTATTT +
Preference number: 4 (lower is better)
Translates to: VSIKLSAGWGGYSLTTFFISTLA*SRTSLF
Trigger: AAATAAAGAGGTTCTTGAGCAGGCCAGAGTGGAAAT...AAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp GCCCACTTTCTTAGAGCCATACTTTTGAATGATGGGATCATCCTGAAGGTTGATAGAATGTTGAGGGCCTaGTGGGCACTGCCAAAACTT +
Preference number: 4 (lower is better)
Translates to: AHFLRAILLNDGIILKVDRMLRA*WALPKL
Trigger: AAGTTTTGGCAGTGCCCAGCAGGCCCTCAACATTCT...ATCAACCTTCAGGATGATCCCATCATTCAAAAGTATGGCTCTAAGAAAGTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR GCA 90 bp GCATCTGGTCAAGCCCACTTTCTTAGAGCCATACTTTTGAATGATGGGATCATCCCTGACCACATTCTTTaGCATTGCCTACAAGGGGTA +
Preference number: 4 (lower is better)
Translates to: ASGQAHFLRAILLNDGIIPDHIL*HCLQGV
Trigger: TACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGG...GATGATCCCATCATTCAAAAGTATGGCTCTAAGAAAGTGGGCTTGACCAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CCA 90 bp CACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCTCACACAGCTGGTCATaGGTTACTTCACAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: HILCHCLQGVRNGTWKHGSHSWS*VTSQLS
Trigger: TGACAACTGTGAAGTAACCCATGACCAGCTGTGTGA...GCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp TGGAAAGTGAAACGTTCTCATTTCCTCCTTTGTCAGAAGGCATCTGGTCAAGCCAGCAATTCACACAGCTaGTCATGGGTTACTTCACAG +
Preference number: 4 (lower is better)
Translates to: WKVKRSHFLLCQKASGQASNSHS*SWVTSQ
Trigger: CTGTGAAGTAACCCATGACCAGCTGTGTGAATTGCT...GGCTTGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAACGTTTCACTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR CCA 90 bp CTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGGTTTTGGAACATTaGATTTGCCCAGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: LQPDHILCHCLQGVRNGTWVLEH*ICPELH
Trigger: ATGCAGTTCTGGGCAAATCCAATGTTCCAAAACCCA...TGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CCA 90 bp TGTAGCCCAACAACATCAGCTAGAAAATCAGATGATGGTGGAGGCAAGCGGAATTCCAAATCTAAGGAGTaGCCCACTAACACAGCATCA +
Preference number: 4 (lower is better)
Translates to: CSPTTSARKSDDGGGKRNSKSKE*PTNTAS
Trigger: TGATGCTGTGTTAGTGGGCCACTCCTTAGATTTGGA...ATTCCGCTTGCCTCCACCATCATCTGATTTTCTAGCTGATGTTGTTGGGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CCA 90 bp GAAAGTGAAACGTTCTCATTTCCTCCTTTGTCAGAAGGCATCTGGTCAAGCCCAATGACCAAGTCTGTCTaGACACTGTATATCCTTCCC +
Preference number: 4 (lower is better)
Translates to: ESETFSFPPLSEGIWSSPMTKSV*TLYILP
Trigger: GGGAAGGATATACAGTGTCCAGACAGACTTGGTCAT...TGGGCTTGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAACGTTTCACTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR GCA 90 bp GAAAGTGAAACGTTCTCATTTCCTCCTTTGTCAGAAGGCATCTGGTCAAGCCCAGGATTTGCCCAGAACTaGATACTTCAGCAATTCACA +
Preference number: 4 (lower is better)
Translates to: ESETFSFPPLSEGIWSSPGFAQN*ILQQFT
Trigger: TGTGAATTGCTGAAGTATGCAGTTCTGGGCAAATCC...TGGGCTTGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAACGTTTCACTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR GCA 90 bp CTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACAAGCAGTGCTTTTAACTaGCTCTGTACATCTTTGAGT +
Preference number: 4 (lower is better)
Translates to: LQPDHILCHCLQGVRNGTSSAFN*LCTSLS
Trigger: ACTCAAAGATGTACAGAGGCAGTTAAAAGCACTGCT...TGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp CACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCAGCGGAATTTATGTCTaGATGCTTTTCGAAGACATC +
Preference number: 4 (lower is better)
Translates to: HILCHCLQGVRNGTWKHGSGIYV*MLFEDI
Trigger: GATGTCTTCGAAAAGCATTCAGACATAAATTCCGCT...GCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp CTTCGTGATTCCCGAAAAGCTGGTGAGGTAGTCCAGAATCTTGTTTTCAGGTTTAGCCATACTTTTGAATaGTGGGATCATCCTGAAGGT +
Preference number: 4 (lower is better)
Translates to: LRDSRKAGEVVQNLVFRFSHTFE*WDHPEG
Trigger: ACCTTCAGGATGATCCCATCATTCAAAAGTATGGCT...AAACCTGAAAACAAGATTCTGGACTACCTCACCAGCTTTTCGGGAATCACGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR TCA 90 bp CACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCTCATTTTCAGTGCTCTaGGATCCAAATCTAAGGAGT +
Preference number: 4 (lower is better)
Translates to: HILCHCLQGVRNGTWKHGSFSVL*DPNLRS
Trigger: ACTCCTTAGATTTGGATCTCAGAGCACTGAAAATGA...GCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp CCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAAGCTTGTATTTCTTGGTaGTTAGCTAGTGCTTCTAGA +
Preference number: 4 (lower is better)
Translates to: PDHILCHCLQGVRNGTWKACISW*LASASR
Trigger: TCTAGAAGCACTAGCTAATCACCAAGAAATACAAGC...TTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCTTGGAACATTGGATTTaGCCAGAACTGCATACTTCA +
Preference number: 4 (lower is better)
Translates to: HILCHCLQGVRNGTWKHGLEHWI*PELHTS
Trigger: TGAAGTATGCAGTTCTGGGCAAATCCAATGTTCCAA...GCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR GCA 90 bp CGTGATTCCCGAAAAGCTGGTGAGGTAGTCCAGAATCTTGTTTTCAGGTTTGACAGCAGTGCTTTTAACTaGCTCTGTACATCTTTGAGT +
Preference number: 4 (lower is better)
Translates to: RDSRKAGEVVQNLVFRFDSSAFN*LCTSLS
Trigger: ACTCAAAGATGTACAGAGGCAGTTAAAAGCACTGCT...GTCAAACCTGAAAACAAGATTCTGGACTACCTCACCAGCTTTTCGGGAATCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR GCA 90 bp GAAAGTGAAACGTTCTCATTTCCTCCTTTGTCAGAAGGCATCTGGTCAAGCCCACACATTCTTTGCCATTaGCTACAAGGGGTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: ESETFSFPPLSEGIWSSPHILCH*LQGVRN
Trigger: ATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG...TGGGCTTGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAACGTTTCACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CCA 90 bp GCCCACTTTCTTAGAGCCATACTTTTGAATGATGGGATCATCCTGAAGGTTGATTCACACAGCTGGTCATaGGTTACTTCACAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: AHFLRAILLNDGIILKVDSHSWS*VTSQLS
Trigger: TGACAACTGTGAAGTAACCCATGACCAGCTGTGTGA...ATCAACCTTCAGGATGATCCCATCATTCAAAAGTATGGCTCTAAGAAAGTGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR CCA 90 bp CCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAAACAAAAGTCATTGACTaGACTGGGCCAAAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: PDHILCHCLQGVRNGTWKTKVID*TGPKLL
Trigger: TAAAAGCTTTGGCCCAGTCCAGTCAATGACTTTTGT...TTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR TCA 90 bp GAGGCACATTTCACAGTCAAGTCCAAAGAGAGGACTATTGTCTGCTATAGAACCTCATTTTCAGTGCTCTaGGATCCAAATCTAAGGAGT +
Preference number: 4 (lower is better)
Translates to: EAHFTVKSKERTIVCYRTSFSVL*DPNLRS
Trigger: ACTCCTTAGATTTGGATCTCAGAGCACTGAAAATGA...GGTTCTATAGCAGACAATAGTCCTCTCTTTGGACTTGACTGTGAAATGTGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566518.5
CDS-3UTR TCA 90 bp CTCTGTACATCTTTGAGTTTGGTCGTCACTGGGTTAAGAATCTTCTTCGTGATTCTTGTGTTTGGGTGCTaGAGTACTTCTGCTGTGTTT +
Preference number: 4 (lower is better)
Translates to: LCTSLSLVVTGLRIFFVILVFGC*STSAVF
Trigger: AAACACAGCAGAAGTACTTCAGCACCCAAACACAAG...AATCACGAAGAAGATTCTTAACCCAGTGACGACCAAACTCAAAGATGTACAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR TCA 90 bp CTCTGTACATCTTTGAGTTTGGTCGTCACTGGGTTAAGAATCTTCTTCGTGATTGCAATAGCTGTTCTTTaGAGGTTTCACTCACTCCAG +
Preference number: 4 (lower is better)
Translates to: LCTSLSLVVTGLRIFFVIAIAVL*RFHSLQ
Trigger: CTGGAGTGAGTGAAACCTTCAAAGAACAGCTATTGC...AATCACGAAGAAGATTCTTAACCCAGTGACGACCAAACTCAAAGATGTACAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR GCA 90 bp CTCTGTACATCTTTGAGTTTGGTCGTCACTGGGTTAAGAATCTTCTTCGTGATTAGGCTCTTGGCCTGCTaGTTGTATTTCTTGGTGATT +
Preference number: 4 (lower is better)
Translates to: LCTSLSLVVTGLRIFFVIRLLAC*LYFLVI
Trigger: AATCACCAAGAAATACAAGCAGCAGGCCAAGAGCCT...AATCACGAAGAAGATTCTTAACCCAGTGACGACCAAACTCAAAGATGTACAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CCA 90 bp TGCTTAAGGAAATACCGAGCCAATTCAAGGATTGTTCTAGCATCTTCTGTGGCATGGGTTTTGGAACATTaGATTTGCCCAGAACTGCAT +
Preference number: 4 (lower is better)
Translates to: CLRKYRANSRIVLASSVAWVLEH*ICPELH
Trigger: ATGCAGTTCTGGGCAAATCCAATGTTCCAAAACCCA...TGCCACAGAAGATGCTAGAACAATCCTTGAATTGGCTCGGTATTTCCTTAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
3UTR CAA 72 bp AGCAGTGCTTTTAACTGCCTCTGTACATCTTTGAGTTaGGTCGTCACTGGGTTAAGAATCTTCTTCGTGATT +
Preference number: 4 (lower is better)
Translates to: SSAFNCLCTSLS*VVTGLRIFFVI
Trigger: AATCACGAAGAAGATTCTTAACCCAGTGACGACCAAACTCAAAGATGTACAGAGGCAGTTAAAAGCACTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR GCA 90 bp CCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAAGAGAGGACTATTGTCTaGTATAGAACCATTACATTT +
Preference number: 4 (lower is better)
Translates to: PDHILCHCLQGVRNGTWKERTIV*YRTITF
Trigger: AAATGTAATGGTTCTATAGCAGACAATAGTCCTCTC...TTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000348433.10
CDS-3UTR CCA 90 bp TGTCAGAAGGCATCTGGTCAAGCCCACTTTCTTAGAGCCATACTTTTGAATGATACAATTTCTGGAAGATaGAAGTTCACCAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: CQKASGQAHFLRAILLNDTISGR*KFTSIC
Trigger: ACAGATGCTGGTGAACTTCCATCTTCCAGAAATTGT...ATCATTCAAAAGTATGGCTCTAAGAAAGTGGGCTTGACCAGATGCCTTCTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CCA 90 bp TGTCAGAAGGCATCTGGTCAAGCCCACTTTCTTAGAGCCATACTTTTGAATGATACAAAAGTCATTGACTaGACTGGGCCAAAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: CQKASGQAHFLRAILLNDTKVID*TGPKLL
Trigger: TAAAAGCTTTGGCCCAGTCCAGTCAATGACTTTTGT...ATCATTCAAAAGTATGGCTCTAAGAAAGTGGGCTTGACCAGATGCCTTCTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CCA 90 bp CATTTCACAGTCAAGTCCAAAGAGAGGACTATTGTCTGCTATAGAACCATTACAGAGTTTGGTCGTCACTaGGTTAAGAATCTTCTTCGT +
Preference number: 4 (lower is better)
Translates to: HFTVKSKERTIVCYRTITEFGRH*VKNLLR
Trigger: ACGAAGAAGATTCTTAACCCAGTGACGACCAAACTC...TGTAATGGTTCTATAGCAGACAATAGTCCTCTCTTTGGACTTGACTGTGAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566518.5
CDS-3UTR GCA 90 bp TGTCAGAAGGCATCTGGTCAAGCCCACTTTCTTAGAGCCATACTTTTGAATGATGAGAGGACTATTGTCTaGTATAGAACCATTACATTT +
Preference number: 4 (lower is better)
Translates to: CQKASGQAHFLRAILLNDERTIV*YRTITF
Trigger: AAATGTAATGGTTCTATAGCAGACAATAGTCCTCTC...ATCATTCAAAAGTATGGCTCTAAGAAAGTGGGCTTGACCAGATGCCTTCTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566518.5
3UTR CAA 72 bp AGGCACATTTCACAGTCAAGTCCAAAGAGAGGACTATaGTCTGCTATAGAACCATTACATTTGGTAAGTAAA +
Preference number: 4 (lower is better)
Translates to: RHISQSSPKRGL*SAIEPLHLVSK
Trigger: TTTACTTACCAAATGTAATGGTTCTATAGCAGACAATAGTCCTCTCTTTGGACTTGACTGTGAAATGTGCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566518.5
CDS GCA 90 bp CCATGGCGGATTCTCAACGGTTCCCCAACGGCTACAACGGGCGTCTaGCTGGCAAAGAAGGAAGGTGCTGCCGAGCGGCTTCGCCGCCTA +
Preference number: 5 (lower is better)
Translates to: PWRILNGSPTATTGV*LAKKEGAAERLRRL
Trigger: TAGGCGGCGAAGCCGCTCGGCAGCACCTTCCTTCTTTGCCAGGCAGACGCCCGTTGTAGCCGTTGGGGAACCGTTGAGAATCCGCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS GCA 90 bp CCGTCTCGGATTCTCAACGGTTCCCCAACGGCTACAACGGGCGTCTaGCTGGCAAAGAAGGAAGGTGCTGCCGAGCGGCTTCGCCGCCTA +
Preference number: 5 (lower is better)
Translates to: PSRILNGSPTATTGV*LAKKEGAAERLRRL
Trigger: TAGGCGGCGAAGCCGCTCGGCAGCACCTTCCTTCTTTGCCAGGCAGACGCCCGTTGTAGCCGTTGGGGAACCGTTGAGAATCCGAGACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568501.5
CDS GCA 90 bp GGTTACCGGATTCTCAACGGTTCCCCAACGGCTACAACGGGCGTCTaGCTGGCAAAGAAGGAAGGTGCTGCCGAGCGGCTTCGCCGCCTA +
Preference number: 5 (lower is better)
Translates to: GYRILNGSPTATTGV*LAKKEGAAERLRRL
Trigger: TAGGCGGCGAAGCCGCTCGGCAGCACCTTCCTTCTTTGCCAGGCAGACGCCCGTTGTAGCCGTTGGGGAACCGTTGAGAATCCGGTAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566276.5
ENST00000568046.5
CDS GCA 90 bp GGCTTTCGGATTCTCAACGGTTCCCCAACGGCTACAACGGGCGTCTaGCTGGCAAAGAAGGAAGGTGCTGCCGAGCGGCTTCGCCGCCTA +
Preference number: 5 (lower is better)
Translates to: GFRILNGSPTATTGV*LAKKEGAAERLRRL
Trigger: TAGGCGGCGAAGCCGCTCGGCAGCACCTTCCTTCTTTGCCAGGCAGACGCCCGTTGTAGCCGTTGGGGAACCGTTGAGAATCCGAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568476.5
CDS GCA 90 bp GGGCTGACTCTCCTCGAGATCCCAACCGGCTTTCATCGCCTCAGCTaGCCCGACCAGCTTATTTGGGGCCTGCCTGCTTTCCCTGACCTT +
Preference number: 5 (lower is better)
Translates to: GLTLLEIPTGFHRLS*PDQLIWGLPAFPDL
Trigger: AAGGTCAGGGAAAGCAGGCAGGCCCCAAATAAGCTGGTCGGGGCAGCTGAGGCGATGAAAGCCGGTTGGGATCTCGAGGAGAGTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000563068.1
ENST00000564274.5
ENST00000566518.5
ENST00000566993.5
ENST00000567297.5
ENST00000568046.5
ENST00000568647.5
ENST00000568894.5
CDS CCA 90 bp ATCCCAACCGGCTTTCATCGCCTCAGCTGCCCCGACCAGCTTATTTaGGGCCTGCCTGCTTTCCCTGACCTTCCTGGGGTGTCTCTCGGT +
Preference number: 5 (lower is better)
Translates to: IPTGFHRLSCPDQLI*GLPAFPDLPGVSLG
Trigger: ACCGAGAGACACCCCAGGAAGGTCAGGGAAAGCAGGCAGGCCCCAAATAAGCTGGTCGGGGCAGCTGAGGCGATGAAAGCCGGTTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000563068.1
ENST00000564274.5
ENST00000566518.5
ENST00000566993.5
ENST00000567297.5
ENST00000568046.5
ENST00000568647.5
ENST00000568894.5
CDS-3UTR CAA 90 bp ACATGGCAGGCCGACTCACGAACACAGGCCTGGGCCAGCGCTTTCTTCTTCCTCTTGCCTGTGAGAATGTaGAGGGCCTGCTGGGCACTG +
Preference number: 5 (lower is better)
Translates to: TWQADSRTQAWASAFFFLLPVRM*RACWAL
Trigger: CAGTGCCCAGCAGGCCCTCAACATTCTCACAGGCAA...GAGGAAGAAGAAAGCGCTGGCCCAGGCCTGTGTTCGTGAGTCGGCCTGCCATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS TCA 90 bp CTATTCCCCCGCGTGCCGCCTCCTAGCGGGAGAGCTACACGGGCTTaGCAGCTTTCAACCTCCCTCGGATCCGCTTCTCAATTCAGTTTA +
Preference number: 5 (lower is better)
Translates to: LFPRVPPPSGRATRA*QLSTSLGSASQFSL
Trigger: TAAACTGAATTGAGAAGCGGATCCGAGGGAGGTTGAAAGCTGTCAAGCCCGTGTAGCTCTCCCGCTAGGAGGCGGCACGCGGGGGAATAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563068.1
CDS-3UTR CAA 90 bp AAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCCCCGACCAGCTTATTaGGGGCCTGCCTGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: KAVCWLGRLQPDHILCHCPRPAY*GPACFP
Trigger: GGGAAAGCAGGCAGGCCCCAAATAAGCTGGTCGGGG...GCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp AAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCAAAGCTGTCTGCTGGTaGGGGAGGCTACAGCCTGAC +
Preference number: 5 (lower is better)
Translates to: KLSAGWGGYSLTTFFAIAKAVCW*GRLQPD
Trigger: GTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTT...GGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp GCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGACAGGCCTCTGCACCTaGATGCAGATACCATCTACC +
Preference number: 5 (lower is better)
Translates to: AGWGGYSLTTFFAIAYKGTGLCT*MQIPST
Trigger: GGTAGATGGTATCTGCATCAAGGTGCAGAGGCCTGT...CCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000566993.5
CDS-3UTR CAA 90 bp TCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGCCCTGGGAGCCTTGTaGATTCAGGTGGTAAGCCTC +
Preference number: 5 (lower is better)
Translates to: SAGWGGYSLTTFFAIAYKALGAL*IQVVSL
Trigger: GAGGCTTACCACCTGAATCAACAAGGCTCCCAGGGC...CTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp CATCTTCTGTGGCATCATGACCAAGTCTGTCTGGACACTGTATATCCTTCCCCACCCCGACCAGCTTATTaGGGGCCTGCCTGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: HLLWHHDQVCLDTVYPSPPRPAY*GPACFP
Trigger: GGGAAAGCAGGCAGGCCCCAAATAAGCTGGTCGGGG...TGGGGAAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR CAA 90 bp AAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCGGCCCTTCCATTGTCTaGGGCAGATCTCCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: KAVCWLGRLQPDHILCHCGPSIV*GRSPAL
Trigger: AAGAGCTGGAGATCTGCCCAAGACAATGGAAGGGCC...GCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp GCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGGTTAGCTCTCTCCCCTaGGATGTGAGGCACATTTCA +
Preference number: 5 (lower is better)
Translates to: AGWGGYSLTTFFAIAYKGVSSLP*DVRHIS
Trigger: TGAAATGTGCCTCACATCCAAGGGGAGAGAGCTAAC...CCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000348433.10
CDS-3UTR CAA 90 bp TTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCGCCCTGGGAGCCTTGTaGATTCAGGTGGTAAGCCTC +
Preference number: 5 (lower is better)
Translates to: FHKAVCWLGRLQPDHILCALGAL*IQVVSL
Trigger: GAGGCTTACCACCTGAATCAACAAGGCTCCCAGGGC...GCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS TCA 90 bp TCAGTAAATAAAATGGTAGATAAGCGGGCTTTCTTGGCCTCGGGCTaGCTCTCCTCGAGATCCCAACCGGCTTTCATCGCCTCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: SVNKMVDKRAFLASG*LSSRSQPAFIASAA
Trigger: GGCAGCTGAGGCGATGAAAGCCGGTTGGGATCTCGAGGAGAGTCAGCCCGAGGCCAAGAAAGCCCGCTTATCTACCATTTTATTTACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000563068.1
ENST00000564274.5
ENST00000566518.5
ENST00000566993.5
ENST00000567297.5
ENST00000568046.5
ENST00000568647.5
ENST00000568894.5
CDS-3UTR CAA 90 bp CCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACCCCGACCAGCTTATTaGGGGCCTGCCTGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: PDHILCHCLQGVRNGTWKPRPAY*GPACFP
Trigger: GGGAAAGCAGGCAGGCCCCAAATAAGCTGGTCGGGG...TTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp GCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGCTGGGTTTTGGAACATaGGATTTGCCCAGAACTGCA +
Preference number: 5 (lower is better)
Translates to: AGWGGYSLTTFFAIAYKGLGFGT*DLPRTA
Trigger: TGCAGTTCTGGGCAAATCCAATGTTCCAAAACCCAG...CCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp AAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTGCCTCTGTACATCTTaGAGTTTGGTCGTCACTGGG +
Preference number: 5 (lower is better)
Translates to: KLSAGWGGYSLTTFFAIACLCTS*SLVVTG
Trigger: CCCAGTGACGACCAAACTCAAAGATGTACAGAGGCA...GGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp GTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTTTGCCTGTGAGAATGTaGAGGGCCTGCTGGGCACTG +
Preference number: 5 (lower is better)
Translates to: VSIKLSAGWGGYSLTTFFLPVRM*RACWAL
Trigger: CAGTGCCCAGCAGGCCCTCAACATTCTCACAGGCAA...AAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp AGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCAAAGCTGTCTGCTGGTaGGGGAGGCTACAGCCTGAC +
Preference number: 5 (lower is better)
Translates to: RLQPDHILCHCLQGVRNGKAVCW*GRLQPD
Trigger: GTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTT...GCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS TCA 90 bp CTTCAGCAACCAGTGAGATGCGTGTTAGCTCTCTCCCCTTGGATGTaGGGCACTGAAAGACCAACATGTAGTCAGGCTGCTGAACTGTGG +
Preference number: 5 (lower is better)
Translates to: LQQPVRCVLALSPWM*GTERPTCSQAAELW
Trigger: CCACAGTTCAGCAGCCTGACTACATGTTGGTCTTTCAGTGCCTCACATCCAAGGGGAGAGAGCTAACACGCATCTCACTGGTTGCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563045.1
CDS TCA 90 bp ATGAGCCACCGCACTCGGCCGACTCACTATCCCAGTGACAGCCAATaGCAGCCTTGTTGCAGGAAGGTGGTATTACACTCATTCCCATTT +
Preference number: 5 (lower is better)
Translates to: MSHRTRPTHYPSDSQ*QPCCRKVVLHSFPF
Trigger: AAATGGGAATGAGTGTAATACCACCTTCCTGCAACAAGGCTGTCATTGGCTGTCACTGGGATAGTGAGTCGGCCGAGTGCGGTGGCTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563617.1
CDS-3UTR CAA 90 bp GAAATACCGAGCCAATTCAAGGATTGTTCTAGCATCTTCTGTGGCATCATGACCCCCCGACCAGCTTATTaGGGGCCTGCCTGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: EIPSQFKDCSSIFCGIMTPRPAY*GPACFP
Trigger: GGGAAAGCAGGCAGGCCCCAAATAAGCTGGTCGGGG...GGTCATGATGCCACAGAAGATGCTAGAACAATCCTTGAATTGGCTCGGTATTTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR CAA 90 bp TGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGCTGGGTTTTGGAACATaGGATTTGCCCAGAACTGCA +
Preference number: 5 (lower is better)
Translates to: CWLGRLQPDHILCHCLQGLGFGT*DLPRTA
Trigger: TGCAGTTCTGGGCAAATCCAATGTTCCAAAACCCAG...CCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp AGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCGGCCCTTCCATTGTCTaGGGCAGATCTCCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: RLQPDHILCHCLQGVRNGGPSIV*GRSPAL
Trigger: AAGAGCTGGAGATCTGCCCAAGACAATGGAAGGGCC...GCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp AAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCTGCCTCTGTACATCTTaGAGTTTGGTCGTCACTGGG +
Preference number: 5 (lower is better)
Translates to: KAVCWLGRLQPDHILCHCCLCTS*SLVVTG
Trigger: CCCAGTGACGACCAAACTCAAAGATGTACAGAGGCA...GCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp CTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATTGCCTGTGAGAATGTaGAGGGCCTGCTGGGCACTG +
Preference number: 5 (lower is better)
Translates to: LQPDHILCHCLQGVRNGTLPVRM*RACWAL
Trigger: CAGTGCCCAGCAGGCCCTCAACATTCTCACAGGCAA...TGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp CTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACAGCCCTGGGAGCCTTGTaGATTCAGGTGGTAAGCCTC +
Preference number: 5 (lower is better)
Translates to: LQPDHILCHCLQGVRNGTALGAL*IQVVSL
Trigger: GAGGCTTACCACCTGAATCAACAAGGCTCCCAGGGC...TGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp AGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCGAAGCCCTGGGAGCCTaGTTGATTCAGGTGGTAAGC +
Preference number: 5 (lower is better)
Translates to: RLQPDHILCHCLQGVRNGEALGA*LIQVVS
Trigger: GCTTACCACCTGAATCAACAAGGCTCCCAGGGCTTC...GCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp CTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACAGGCCCTTCCATTGTCTaGGGCAGATCTCCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: LQPDHILCHCLQGVRNGTGPSIV*GRSPAL
Trigger: AAGAGCTGGAGATCTGCCCAAGACAATGGAAGGGCC...TGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp GCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGCTTAGAGCCATACTTTaGAATGATGGGATCATCCTG +
Preference number: 5 (lower is better)
Translates to: AGWGGYSLTTFFAIAYKGLRAIL*NDGIIL
Trigger: CAGGATGATCCCATCATTCAAAAGTATGGCTCTAAG...CCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp TTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCTGCCTCTGTACATCTTaGAGTTTGGTCGTCACTGGG +
Preference number: 5 (lower is better)
Translates to: FHKAVCWLGRLQPDHILCCLCTS*SLVVTG
Trigger: CCCAGTGACGACCAAACTCAAAGATGTACAGAGGCA...GCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp TCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGCAAGAACAAAAGTCATaGACTGGACTGGGCCAAAGC +
Preference number: 5 (lower is better)
Translates to: SAGWGGYSLTTFFAIAYKQEQKS*TGLGQS
Trigger: GCTTTGGCCCAGTCCAGTCAATGACTTTTGTTCTTG...CTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp CAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGACAGGCCTCTGCACCTaGATGCAGATACCATCTACC +
Preference number: 5 (lower is better)
Translates to: QPDHILCHCLQGVRNGTWTGLCT*MQIPST
Trigger: GGTAGATGGTATCTGCATCAAGGTGCAGAGGCCTGT...CCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000566993.5
CDS TCA 90 bp TGTCACAGGCCTCTGCACCTGACGGGTTTCAAGAACAAAAGTCATTaGCTGGACTGGGCCAAAGCTTTTAAACAGCCTCTTCAGAGCCCT +
Preference number: 5 (lower is better)
Translates to: CHRPLHLTGFKNKSH*LDWAKAFKQPLQSP
Trigger: AGGGCTCTGAAGAGGCTGTTTAAAAGCTTTGGCCCAGTCCAGTCAATGACTTTTGTTCTTGAAACCCGTCAGGTGCAGAGGCCTGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000348433.10
ENST00000561474.1
CDS-3UTR CAA 90 bp CCTCCTTCAGCAACCAGTGAGATGCGTGTTAGCTCTCTCCCCTTGGATGTGAGGCTTAGAGCCATACTTTaGAATGATGGGATCATCCTG +
Preference number: 5 (lower is better)
Translates to: PPSATSEMRVSSLPLDVRLRAIL*NDGIIL
Trigger: CAGGATGATCCCATCATTCAAAAGTATGGCTCTAAG...CCTCACATCCAAGGGGAGAGAGCTAACACGCATCTCACTGGTTGCTGAAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR CAA 90 bp AAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCTTCTCATTTCCTCCTTaGTCAGAAGGCATCTGGTCA +
Preference number: 5 (lower is better)
Translates to: KAVCWLGRLQPDHILCHCFSFPP*SEGIWS
Trigger: TGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAA...GCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp AGTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTGTTAGCTCTCTCCCCTaGGATGTGAGGCACATTTCA +
Preference number: 5 (lower is better)
Translates to: SFHKAVCWLGRLQPDHILVSSLP*DVRHIS
Trigger: TGAAATGTGCCTCACATCCAAGGGGAGAGAGCTAAC...AAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000348433.10
CDS-3UTR CAA 90 bp CATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATCTCTTGGCCTGCTGCTaGTATTTCTTGGTGATTAGC +
Preference number: 5 (lower is better)
Translates to: HKAVCWLGRLQPDHILCHLLACC*YFLVIS
Trigger: GCTAATCACCAAGAAATACAAGCAGCAGGCCAAGAG...ATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp AAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCTTGATCCTCATCCTTTaGTTCATCTCCTCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: KAVCWLGRLQPDHILCHCLILIL*FISSVR
Trigger: CCTCACTGAGGAGATGAACAAAAGGATGAGGATCAA...GCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp TGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGATATCTCTGTCCACTaGATCCTCATCCTTTTGTTC +
Preference number: 5 (lower is better)
Translates to: CWLGRLQPDHILCHCLQGDISVH*ILILLF
Trigger: GAACAAAAGGATGAGGATCAAGTGGACAGAGATATC...CCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp TGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGTGCAATAGCTGTTCTTaGAAGGTTTCACTCACTCCA +
Preference number: 5 (lower is better)
Translates to: CWLGRLQPDHILCHCLQGCNSCS*KVSLTP
Trigger: TGGAGTGAGTGAAACCTTCAAAGAACAGCTATTGCA...CCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp AGTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTTCAGCTTCCAGTCCTaGCCTGTGAGAATGTTGAGG +
Preference number: 5 (lower is better)
Translates to: SFHKAVCWLGRLQPDHILFSFQS*PVRMLR
Trigger: CCTCAACATTCTCACAGGCAAGGACTGGAAGCTGAA...AAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp CCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAAGAAGCCCTGGGAGCCTaGTTGATTCAGGTGGTAAGC +
Preference number: 5 (lower is better)
Translates to: PDHILCHCLQGVRNGTWKEALGA*LIQVVS
Trigger: GCTTACCACCTGAATCAACAAGGCTCCCAGGGCTTC...TTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp CACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCGAAGCCCTGGGAGCCTaGTTGATTCAGGTGGTAAGC +
Preference number: 5 (lower is better)
Translates to: HILCHCLQGVRNGTWKHGEALGA*LIQVVS
Trigger: GCTTACCACCTGAATCAACAAGGCTCCCAGGGCTTC...GCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp TCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGCCACATTCTTTGCCATaGCCTACAAGGGGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: SAGWGGYSLTTFFAIAYKPHSLP*PTRGKK
Trigger: TTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGG...CTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp TCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCTGTACATCTTTGAGTTaGGTCGTCACTGGGTTAAGA +
Preference number: 5 (lower is better)
Translates to: SIKLSAGWGGYSLTTFFACTSLS*VVTGLR
Trigger: TCTTAACCCAGTGACGACCAAACTCAAAGATGTACA...GGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp AGCATCTTCTGTGGCATCATGACCAAGTCTGTCTGGACACTGTATATCCTTCCCTGCCTCTGTACATCTTaGAGTTTGGTCGTCACTGGG +
Preference number: 5 (lower is better)
Translates to: SIFCGIMTKSVWTLYILPCLCTS*SLVVTG
Trigger: CCCAGTGACGACCAAACTCAAAGATGTACAGAGGCA...GGGAAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR CAA 90 bp CACAGGCCTCTGCACCTTGATGCAGATACCATCTACCAGAATACCATCCAAGGACTCTTGGCCTGCTGCTaGTATTTCTTGGTGATTAGC +
Preference number: 5 (lower is better)
Translates to: HRPLHLDADTIYQNTIQGLLACC*YFLVIS
Trigger: GCTAATCACCAAGAAATACAAGCAGCAGGCCAAGAG...TCCTTGGATGGTATTCTGGTAGATGGTATCTGCATCAAGGTGCAGAGGCCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CAA 90 bp GTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTCAAGAACAAAAGTCATaGACTGGACTGGGCCAAAGC +
Preference number: 5 (lower is better)
Translates to: VSIKLSAGWGGYSLTTFFQEQKS*TGLGQS
Trigger: GCTTTGGCCCAGTCCAGTCAATGACTTTTGTTCTTG...AAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp AAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCCAGATATATAGAGCCTaGGTTTTCAGAATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: KLSAGWGGYSLTTFFAIAQIYRA*VFRISF
Trigger: GAAGGAGATTCTGAAAACCAAGGCTCTATATATCTG...GGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp TCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGTGCAATAGCTGTTCTTaGAAGGTTTCACTCACTCCA +
Preference number: 5 (lower is better)
Translates to: SAGWGGYSLTTFFAIAYKCNSCS*KVSLTP
Trigger: TGGAGTGAGTGAAACCTTCAAAGAACAGCTATTGCA...CTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp TTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCCACATTCTTTGCCATaGCCTACAAGGGGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: FHKAVCWLGRLQPDHILCPHSLP*PTRGKK
Trigger: TTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGG...GCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp CTGTACATCTTTGAGTTTGGTCGTCACTGGGTTAAGAATCTTCTTCGTGATTCCAAAGCTGTCTGCTGGTaGGGGAGGCTACAGCCTGAC +
Preference number: 5 (lower is better)
Translates to: LYIFEFGRHWVKNLLRDSKAVCW*GRLQPD
Trigger: GTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTT...GGAATCACGAAGAAGATTCTTAACCCAGTGACGACCAAACTCAAAGATGTACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS GCA 90 bp AAGCTGGCACCAGCTGGGTTTTGGAACATTGGATTTGCCCAGAACTaGATACTTCAGCAATTCACACAGCTGGTCATGGGTTACTTCACA +
Preference number: 5 (lower is better)
Translates to: KLAPAGFWNIGFAQN*ILQQFTQLVMGYFT
Trigger: TGTGAAGTAACCCATGACCAGCTGTGTGAATTGCTGAAGTATGCAGTTCTGGGCAAATCCAATGTTCCAAAACCCAGCTGGTGCCAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000563068.1
ENST00000563617.1
ENST00000564274.5
ENST00000567297.5
ENST00000568046.5
ENST00000568647.5
ENST00000568894.5
CDS-3UTR CAA 90 bp AGTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTTCTCATTTCCTCCTTaGTCAGAAGGCATCTGGTCA +
Preference number: 5 (lower is better)
Translates to: SFHKAVCWLGRLQPDHILFSFPP*SEGIWS
Trigger: TGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAA...AAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp CGTTCTCATTTCCTCCTTTGTCAGAAGGCATCTGGTCAAGCCCACTTTCTTAGAGTTAGCTCTCTCCCCTaGGATGTGAGGCACATTTCA +
Preference number: 5 (lower is better)
Translates to: RSHFLLCQKASGQAHFLRVSSLP*DVRHIS
Trigger: TGAAATGTGCCTCACATCCAAGGGGAGAGAGCTAAC...TCTAAGAAAGTGGGCTTGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566518.5
CDS-3UTR CAA 90 bp TTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCTGTACATCTTTGAGTTaGGTCGTCACTGGGTTAAGA +
Preference number: 5 (lower is better)
Translates to: FHKAVCWLGRLQPDHILCCTSLS*VVTGLR
Trigger: TCTTAACCCAGTGACGACCAAACTCAAAGATGTACA...GCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp CTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACACTCTTGGCCTGCTGCTaGTATTTCTTGGTGATTAGC +
Preference number: 5 (lower is better)
Translates to: LQPDHILCHCLQGVRNGTLLACC*YFLVIS
Trigger: GCTAATCACCAAGAAATACAAGCAGCAGGCCAAGAG...TGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp AAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTGCAGCATTCTAAAACACTaGTGTTTGGGTGCTGAAGTA +
Preference number: 5 (lower is better)
Translates to: KAVCWLGRLQPDHILCHCSILKH*CLGAEV
Trigger: TACTTCAGCACCCAAACACAAGTGTTTTAGAATGCT...GCAATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp CATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATTTCAGAGCCCTGAGATaGCAATTTTTGCTAAATGGC +
Preference number: 5 (lower is better)
Translates to: HKAVCWLGRLQPDHILCHFRALR*QFLLNG
Trigger: GCCATTTAGCAAAAATTGCAATCTCAGGGCTCTGAA...ATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp TCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCCAGATATATAGAGCCTaGGTTTTCAGAATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SIKLSAGWGGYSLTTFFAQIYRA*VFRISF
Trigger: GAAGGAGATTCTGAAAACCAAGGCTCTATATATCTG...GGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp AACAATGCTGAAGGGAAACAGGGGGATTTCCACTCTGGCCTGCTCAAGAACCTCTGCAATAGCTGTTCTTaGAAGGTTTCACTCACTCCA +
Preference number: 5 (lower is better)
Translates to: NNAEGKQGDFHSGLLKNLCNSCS*KVSLTP
Trigger: TGGAGTGAGTGAAACCTTCAAAGAACAGCTATTGCA...GAGGTTCTTGAGCAGGCCAGAGTGGAAATCCCCCTGTTTCCCTTCAGCATTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CAA 90 bp CCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAATTCAGCTTCCAGTCCTaGCCTGTGAGAATGTTGAGG +
Preference number: 5 (lower is better)
Translates to: PDHILCHCLQGVRNGTWKFSFQS*PVRMLR
Trigger: CCTCAACATTCTCACAGGCAAGGACTGGAAGCTGAA...TTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp CACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCTTCAGCTTCCAGTCCTaGCCTGTGAGAATGTTGAGG +
Preference number: 5 (lower is better)
Translates to: HILCHCLQGVRNGTWKHGFSFQS*PVRMLR
Trigger: CCTCAACATTCTCACAGGCAAGGACTGGAAGCTGAA...GCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp AGTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTCCACATTCTTTGCCATaGCCTACAAGGGGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: SFHKAVCWLGRLQPDHILPHSLP*PTRGKK
Trigger: TTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGG...AAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS GCA 90 bp GAAGGTAAAGGCCCTGGGTTTTGGAACATTGGATTTGCCCAGAACTaGATACTTCAGCAATTCACACAGCTGGTCATGGGTTACTTCACA +
Preference number: 5 (lower is better)
Translates to: EGKGPGFWNIGFAQN*ILQQFTQLVMGYFT
Trigger: TGTGAAGTAACCCATGACCAGCTGTGTGAATTGCTGAAGTATGCAGTTCTGGGCAAATCCAATGTTCCAAAACCCAGGGCCTTTACCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566518.5
CDS-3UTR CAA 90 bp AGAGCCATACTTTTGAATGATGGGATCATCCTGAAGGTTGATGGCGGCTTTTGCCTGGGTTTTGGAACATaGGATTTGCCCAGAACTGCA +
Preference number: 5 (lower is better)
Translates to: RAILLNDGIILKVDGGFCLGFGT*DLPRTA
Trigger: TGCAGTTCTGGGCAAATCCAATGTTCCAAAACCCAG...GCAAAAGCCGCCATCAACCTTCAGGATGATCCCATCATTCAAAAGTATGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR CAA 90 bp GTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTCTTAGAGCCATACTTTaGAATGATGGGATCATCCTG +
Preference number: 5 (lower is better)
Translates to: VSIKLSAGWGGYSLTTFFLRAIL*NDGIIL
Trigger: CAGGATGATCCCATCATTCAAAAGTATGGCTCTAAG...AAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp CACTGGGTTAAGAATCTTCTTCGTGATTCCCGAAAAGCTGGTGAGGTAGTCCAGTTCTCATTTCCTCCTTaGTCAGAAGGCATCTGGTCA +
Preference number: 5 (lower is better)
Translates to: HWVKNLLRDSRKAGEVVQFSFPP*SEGIWS
Trigger: TGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAA...CTGGACTACCTCACCAGCTTTTCGGGAATCACGAAGAAGATTCTTAACCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR CAA 90 bp TTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCCAAAGAGAGGACTATaGTCTGCTATAGAACCATTA +
Preference number: 5 (lower is better)
Translates to: FHKAVCWLGRLQPDHILCPKRGL*SAIEPL
Trigger: TAATGGTTCTATAGCAGACAATAGTCCTCTCTTTGG...GCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000348433.10
CDS-3UTR CAA 90 bp GTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGATATCTCTGTCCACTaGATCCTCATCCTTTTGTTC +
Preference number: 5 (lower is better)
Translates to: VSIKLSAGWGGYSLTTFFDISVH*ILILLF
Trigger: GAACAAAAGGATGAGGATCAAGTGGACAGAGATATC...AAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp TGGAAAGTGAAACGTTCTCATTTCCTCCTTTGTCAGAAGGCATCTGGTCAAGCCCAAGAACAAAAGTCATaGACTGGACTGGGCCAAAGC +
Preference number: 5 (lower is better)
Translates to: WKVKRSHFLLCQKASGQAQEQKS*TGLGQS
Trigger: GCTTTGGCCCAGTCCAGTCAATGACTTTTGTTCTTG...GGCTTGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAACGTTTCACTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS TCA 90 bp GTCCCTGCAGCAATGGCACAAACTTGCTTTCTAGAGGATCTAGTGTaGGTGAAATTAAAGCTGGGCAGGCTGCTGAATGTTACACTTAAG +
Preference number: 5 (lower is better)
Translates to: VPAAMAQTCFLEDLV*VKLKLGRLLNVTLK
Trigger: CTTAAGTGTAACATTCAGCAGCCTGCCCAGCTTTAATTTCACTCACACTAGATCCTCTAGAAAGCAAGTTTGTGCCATTGCTGCAGGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563045.1
CDS-3UTR CAA 90 bp CTTCGTGATTCCCGAAAAGCTGGTGAGGTAGTCCAGAATCTTGTTTTCAGGTTTCTGGGTTTTGGAACATaGGATTTGCCCAGAACTGCA +
Preference number: 5 (lower is better)
Translates to: LRDSRKAGEVVQNLVFRFLGFGT*DLPRTA
Trigger: TGCAGTTCTGGGCAAATCCAATGTTCCAAAACCCAG...AAACCTGAAAACAAGATTCTGGACTACCTCACCAGCTTTTCGGGAATCACGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR CAA 90 bp GTTTCCATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTCCAAAGAGAGGACTATaGTCTGCTATAGAACCATTA +
Preference number: 5 (lower is better)
Translates to: VSIKLSAGWGGYSLTTFFPKRGL*SAIEPL
Trigger: TAATGGTTCTATAGCAGACAATAGTCCTCTCTTTGG...AAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261377.11
ENST00000348433.10
CDS-3UTR CAA 90 bp CATAAAGCTGTCTGCTGGTTGGGGAGGCTACAGCCTGACCACATTCTTTGCCATATCTTGTTTTCAGGTTaGACCAGTTCATCCATAACA +
Preference number: 5 (lower is better)
Translates to: HKAVCWLGRLQPDHILCHILFSG*TSSSIT
Trigger: TGTTATGGATGAACTGGTCAAACCTGAAAACAAGAT...ATGGCAAAGAATGTGGTCAGGCTGTAGCCTCCCCAACCAGCAGACAGCTTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp CTACAGCCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGTACATCTTTGAGTTaGGTCGTCACTGGGTTAAGA +
Preference number: 5 (lower is better)
Translates to: LQPDHILCHCLQGVRNGTCTSLS*VVTGLR
Trigger: TCTTAACCCAGTGACGACCAAACTCAAAGATGTACA...TGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGGCTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp CATCTTCTGTGGCATCATGACCAAGTCTGTCTGGACACTGTATATCCTTCCCCATGTACATCTTTGAGTTaGGTCGTCACTGGGTTAAGA +
Preference number: 5 (lower is better)
Translates to: HLLWHHDQVCLDTVYPSPCTSLS*VVTGLR
Trigger: TCTTAACCCAGTGACGACCAAACTCAAAGATGTACA...TGGGGAAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR CAA 90 bp CACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCTTGATCCTCATCCTTTaGTTCATCTCCTCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: HILCHCLQGVRNGTWKHGLILIL*FISSVR
Trigger: CCTCACTGAGGAGATGAACAAAAGGATGAGGATCAA...GCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp CTCCTTTGTCAGAAGGCATCTGGTCAAGCCCACTTTCTTAGAGCCATACTTTTGTTGATCCTCATCCTTTaGTTCATCTCCTCAGTGAGG +
Preference number: 5 (lower is better)
Translates to: LLCQKASGQAHFLRAILLLILIL*FISSVR
Trigger: CCTCACTGAGGAGATGAACAAAAGGATGAGGATCAA...CAAAAGTATGGCTCTAAGAAAGTGGGCTTGACCAGATGCCTTCTGACAAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CAA 90 bp CACTGGGTTAAGAATCTTCTTCGTGATTCCCGAAAAGCTGGTGAGGTAGTCCAGTTCAGAGCCCTGAGATaGCAATTTTTGCTAAATGGC +
Preference number: 5 (lower is better)
Translates to: HWVKNLLRDSRKAGEVVQFRALR*QFLLNG
Trigger: GCCATTTAGCAAAAATTGCAATCTCAGGGCTCTGAA...CTGGACTACCTCACCAGCTTTTCGGGAATCACGAAGAAGATTCTTAACCCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS GCA 90 bp TTTACACTATGTCAACTGCCATCTACTGTAATCTACCAGGGTCCCTaGAGCAATGGCACAAACTTGCTTTCTAGAGGATCTAGTGTGAGT +
Preference number: 5 (lower is better)
Translates to: FTLCQLPSTVIYQGP*SNGTNLLSRGSSVS
Trigger: ACTCACACTAGATCCTCTAGAAAGCAAGTTTGTGCCATTGCTGCAGGGACCCTGGTAGATTACAGTAGATGGCAGTTGACATAGTGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563045.1
CDS-3UTR CAA 90 bp CCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAATTTGGAACATTGGATTaGCCCAGAACTGCATACTTC +
Preference number: 5 (lower is better)
Translates to: PDHILCHCLQGVRNGTWKFGTLD*PRTAYF
Trigger: GAAGTATGCAGTTCTGGGCAAATCCAATGTTCCAAA...TTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp CAGAAGGCATCTGGTCAAGCCCACTTTCTTAGAGCCATACTTTTGAATGATGGGCTTAGAGCCATACTTTaGAATGATGGGATCATCCTG +
Preference number: 5 (lower is better)
Translates to: QKASGQAHFLRAILLNDGLRAIL*NDGIIL
Trigger: CAGGATGATCCCATCATTCAAAAGTATGGCTCTAAG...CCCATCATTCAAAAGTATGGCTCTAAGAAAGTGGGCTTGACCAGATGCCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR CAA 90 bp CTTCGTGATTCCCGAAAAGCTGGTGAGGTAGTCCAGAATCTTGTTTTCAGGTTTTTCTCATTTCCTCCTTaGTCAGAAGGCATCTGGTCA +
Preference number: 5 (lower is better)
Translates to: LRDSRKAGEVVQNLVFRFFSFPP*SEGIWS
Trigger: TGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAA...AAACCTGAAAACAAGATTCTGGACTACCTCACCAGCTTTTCGGGAATCACGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR CAA 90 bp GTGAAACGTTCTCATTTCCTCCTTTGTCAGAAGGCATCTGGTCAAGCCCACTTTGATATCTCTGTCCACTaGATCCTCATCCTTTTGTTC +
Preference number: 5 (lower is better)
Translates to: VKRSHFLLCQKASGQAHFDISVH*ILILLF
Trigger: GAACAAAAGGATGAGGATCAAGTGGACAGAGATATC...AAAGTGGGCTTGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAACGTTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CAA 90 bp CACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAACATGGCTTCAGAGCCCTGAGATaGCAATTTTTGCTAAATGGC +
Preference number: 5 (lower is better)
Translates to: HILCHCLQGVRNGTWKHGFRALR*QFLLNG
Trigger: GCCATTTAGCAAAAATTGCAATCTCAGGGCTCTGAA...GCCATGTTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp AGCATCTTCTGTGGCATCATGACCAAGTCTGTCTGGACACTGTATATCCTTCCCCAGATATATAGAGCCTaGGTTTTCAGAATCTCCTTC +
Preference number: 5 (lower is better)
Translates to: SIFCGIMTKSVWTLYILPQIYRA*VFRISF
Trigger: GAAGGAGATTCTGAAAACCAAGGCTCTATATATCTG...GGGAAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CAA 90 bp TCTTTGAGTTTGGTCGTCACTGGGTTAAGAATCTTCTTCGTGATTCCCGAAAAGCTCATTCCCTGGGTTTaGGAACATTGGATTTGCCCA +
Preference number: 5 (lower is better)
Translates to: SLSLVVTGLRIFFVIPEKLIPWV*EHWICP
Trigger: TGGGCAAATCCAATGTTCCAAAACCCAGGGAATGAG...CTTTTCGGGAATCACGAAGAAGATTCTTAACCCAGTGACGACCAAACTCAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS CCA 90 bp GATTTGCCCAGAACTGCATACTTCAGCAATTCACACAGCTGGTCATaGGTTACTTCACAGTTGTCAGTAAATAAAATGGTAGATAAGCGG +
Preference number: 5 (lower is better)
Translates to: DLPRTAYFSNSHSWS*VTSQLSVNKMVDKR
Trigger: CCGCTTATCTACCATTTTATTTACTGACAACTGTGAAGTAACCCATGACCAGCTGTGTGAATTGCTGAAGTATGCAGTTCTGGGCAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000563068.1
ENST00000563617.1
ENST00000564274.5
ENST00000566276.5
ENST00000566518.5
ENST00000566993.5
ENST00000567297.5
ENST00000568046.5
ENST00000568476.5
ENST00000568501.5
ENST00000568647.5
ENST00000568894.5
CDS-3UTR CAA 90 bp CCTGACCACATTCTTTGCCATTGCCTACAAGGGGTAAGAAATGGCACATGGAAAATCTTGTTTTCAGGTTaGACCAGTTCATCCATAACA +
Preference number: 5 (lower is better)
Translates to: PDHILCHCLQGVRNGTWKILFSG*TSSSIT
Trigger: TGTTATGGATGAACTGGTCAAACCTGAAAACAAGAT...TTTCCATGTGCCATTTCTTACCCCTTGTAGGCAATGGCAAAGAATGTGGTCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566993.5
CDS-3UTR CAA 90 bp GTGAAACGTTCTCATTTCCTCCTTTGTCAGAAGGCATCTGGTCAAGCCCACTTTATCTTGTTTTCAGGTTaGACCAGTTCATCCATAACA +
Preference number: 5 (lower is better)
Translates to: VKRSHFLLCQKASGQAHFILFSG*TSSSIT
Trigger: TGTTATGGATGAACTGGTCAAACCTGAAAACAAGAT...AAAGTGGGCTTGACCAGATGCCTTCTGACAAAGGAGGAAATGAGAACGTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS TCA 90 bp GTCCACTTGATCCTCATCTCTTTATTTGAAAGACACTTAATAGTTTaGCAATTTCTGGAAGATGGAAGTTCACCAGCATCTGTCTCCCGG +
Preference number: 5 (lower is better)
Translates to: VHLILISLFERHLIV*QFLEDGSSPASVSR
Trigger: CCGGGAGACAGATGCTGGTGAACTTCCATCTTCCAGAAATTGTCAAACTATTAAGTGTCTTTCAAATAAAGAGATGAGGATCAAGTGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561474.1
CDS-3UTR CAA 90 bp GCCCACTTTCTTAGAGCCATACTTTTGAATGATGGGATCATCCTGAAGGTTGATATCTTGTTTTCAGGTTaGACCAGTTCATCCATAACA +
Preference number: 5 (lower is better)
Translates to: AHFLRAILLNDGIILKVDILFSG*TSSSIT
Trigger: TGTTATGGATGAACTGGTCAAACCTGAAAACAAGAT...ATCAACCTTCAGGATGATCCCATCATTCAAAAGTATGGCTCTAAGAAAGTGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566518.5
ENST00000566993.5
CDS-3UTR CAA 90 bp GAGCTTAAATCTTCTGCCCTGCTCTCTGACATAAAGCAACGATGTATCAATAACAGCATTCTAAAACACTaGTGTTTGGGTGCTGAAGTA +
Preference number: 5 (lower is better)
Translates to: ELKSSALLSDIKQRCINNSILKH*CLGAEV
Trigger: TACTTCAGCACCCAAACACAAGTGTTTTAGAATGCT...GTTATTGATACATCGTTGCTTTATGTCAGAGAGCAGGGCAGAAGATTTAAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566993.5
CDS-3UTR CAA 90 bp CATTTCACAGTCAAGTCCAAAGAGAGGACTATTGTCTGCTATAGAACCATTACACCAAAGAGAGGACTATaGTCTGCTATAGAACCATTA +
Preference number: 5 (lower is better)
Translates to: HFTVKSKERTIVCYRTITPKRGL*SAIEPL
Trigger: TAATGGTTCTATAGCAGACAATAGTCCTCTCTTTGG...TGTAATGGTTCTATAGCAGACAATAGTCCTCTCTTTGGACTTGACTGTGAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566518.5
CDS GCA 72 bp GGCTACAACGGGCGTCTGCCTGGCAAAGAAGGAAGGTaGTGCCGAGCGGCTTCGCCGCCTAAAACCACTCCC +
Preference number: 6 (lower is better)
Translates to: GYNGRLPGKEGR*CRAASPPKTTP
Trigger: GGGAGTGGTTTTAGGCGGCGAAGCCGCTCGGCAGCACCTTCCTTCTTTGCCAGGCAGACGCCCGTTGTAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566276.5
ENST00000566993.5
ENST00000568046.5
ENST00000568501.5
CDS CCA 72 bp TCAACGGTTCCCCAACGGCTACAACGGGCGTCTGCCTaGCAAAGAAGGAAGGTGCTGCCGAGCGGCTTCGCC +
Preference number: 6 (lower is better)
Translates to: STVPQRLQRASA*QRRKVLPSGFA
Trigger: GGCGAAGCCGCTCGGCAGCACCTTCCTTCTTTGCCAGGCAGACGCCCGTTGTAGCCGTTGGGGAACCGTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000565340.5
ENST00000566276.5
ENST00000566993.5
ENST00000568046.5
ENST00000568476.5
ENST00000568501.5
CDS TCA 72 bp CGCGTGCCGCCTCCTAGCGGGAGAGCTACACGGGCTTaGCAGCTTTCAACCTCCCTCGGATCCGCTTCTCAA +
Preference number: 6 (lower is better)
Translates to: RVPPPSGRATRA*QLSTSLGSASQ
Trigger: TTGAGAAGCGGATCCGAGGGAGGTTGAAAGCTGTCAAGCCCGTGTAGCTCTCCCGCTAGGAGGCGGCACGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563068.1
CDS GCA 72 bp TACAACGGGCGTCTGCCTGGCAAAGAAGGAAGGTGCTaGCGAGCGGCTTCGCCGCCTAAAACCACTCCCCAC +
Preference number: 6 (lower is better)
Translates to: YNGRLPGKEGRC*RAASPPKTTPH
Trigger: GTGGGGAGTGGTTTTAGGCGGCGAAGCCGCTCGGCAGCACCTTCCTTCTTTGCCAGGCAGACGCCCGTTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000566276.5
ENST00000566993.5
ENST00000568046.5
ENST00000568501.5
CDS CAA 90 bp AGCCACAGCTGCCAACAACAACCGCCCCTCAGCCTCGCGGGCTTTTaGAACGGACCGGAAGTAGAAGTCGAGCGACTTCCGGCAGCTGGA +
Preference number: 6 (lower is better)
Translates to: SHSCQQQPPLSLAGF*NGPEVEVERLPAAG
Trigger: TCCAGCTGCCGGAAGTCGCTCGACTTCTACTTCCGGTCCGTTCAAAAAGCCCGCGAGGCTGAGGGGCGGTTGTTGTTGGCAGCTGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568046.5
CDS GCA 72 bp CTCCTCGAGATCCCAACCGGCTTTCATCGCCTCAGCTaGCCCGACCAGCTTATTTGGGGCCTGCCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: LLEIPTGFHRLS*PDQLIWGLPAF
Trigger: GAAAGCAGGCAGGCCCCAAATAAGCTGGTCGGGGCAGCTGAGGCGATGAAAGCCGGTTGGGATCTCGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000563068.1
ENST00000564274.5
ENST00000566518.5
ENST00000566993.5
ENST00000567297.5
ENST00000568046.5
ENST00000568647.5
ENST00000568894.5
CDS GCA 72 bp ATTCTCAACGGTTCCCCAACGGCTACAACGGGCGTCTaGCTGGCAAAGAAGGAAGGTGCTGCCGAGCGGCTT +
Preference number: 6 (lower is better)
Translates to: ILNGSPTATTGV*LAKKEGAAERL
Trigger: AAGCCGCTCGGCAGCACCTTCCTTCTTTGCCAGGCAGACGCCCGTTGTAGCCGTTGGGGAACCGTTGAGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000565340.5
ENST00000566276.5
ENST00000566993.5
ENST00000568046.5
ENST00000568476.5
ENST00000568501.5
CDS CAA 72 bp TGCCAACAACAACCGCCCCTCAGCCTCGCGGGCTTTTaGAACGGACCGGAAGTAGAAGTCGAGCGACTTCCG +
Preference number: 6 (lower is better)
Translates to: CQQQPPLSLAGF*NGPEVEVERLP
Trigger: CGGAAGTCGCTCGACTTCTACTTCCGGTCCGTTCAAAAAGCCCGCGAGGCTGAGGGGCGGTTGTTGTTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568046.5
CDS TCA 72 bp CATGAGCCACCGCACTCGGCCGACTCACTATCCCAGTaGCAGCCAATGACAGCCTTGTTGCAGGAAGGTGGT +
Preference number: 6 (lower is better)
Translates to: HEPPHSADSLSQ*QPMTALLQEGG
Trigger: ACCACCTTCCTGCAACAAGGCTGTCATTGGCTGTCACTGGGATAGTGAGTCGGCCGAGTGCGGTGGCTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563617.1
CDS TCA 72 bp CGCACTCGGCCGACTCACTATCCCAGTGACAGCCAATaGCAGCCTTGTTGCAGGAAGGTGGTATTACACTCA +
Preference number: 6 (lower is better)
Translates to: RTRPTHYPSDSQ*QPCCRKVVLHS
Trigger: TGAGTGTAATACCACCTTCCTGCAACAAGGCTGTCATTGGCTGTCACTGGGATAGTGAGTCGGCCGAGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563617.1
CDS TCA 72 bp CCAGTGAGATGCGTGTTAGCTCTCTCCCCTTGGATGTaGGGCACTGAAAGACCAACATGTAGTCAGGCTGCT +
Preference number: 6 (lower is better)
Translates to: PVRCVLALSPWM*GTERPTCSQAA
Trigger: AGCAGCCTGACTACATGTTGGTCTTTCAGTGCCTCACATCCAAGGGGAGAGAGCTAACACGCATCTCACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563045.1
CDS GCA 72 bp CCAGCTGGGTTTTGGAACATTGGATTTGCCCAGAACTaGATACTTCAGCAATTCACACAGCTGGTCATGGGT +
Preference number: 6 (lower is better)
Translates to: PAGFWNIGFAQN*ILQQFTQLVMG
Trigger: ACCCATGACCAGCTGTGTGAATTGCTGAAGTATGCAGTTCTGGGCAAATCCAATGTTCCAAAACCCAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000563068.1
ENST00000563617.1
ENST00000564274.5
ENST00000567297.5
ENST00000568046.5
ENST00000568647.5
ENST00000568894.5
CDS CAA 90 bp CCATCTACTGTAATCTACCAGGGTCCCTGCAGCAATGGCACAAACTaGCTTTCTAGAGGATCTAGTGTGAGTGAAATTAAAGCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: PSTVIYQGPCSNGTN*LSRGSSVSEIKAGQ
Trigger: CTGCCCAGCTTTAATTTCACTCACACTAGATCCTCTAGAAAGCAAGTTTGTGCCATTGCTGCAGGGACCCTGGTAGATTACAGTAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563045.1
CDS GCA 72 bp TGTCAACTGCCATCTACTGTAATCTACCAGGGTCCCTaGAGCAATGGCACAAACTTGCTTTCTAGAGGATCT +
Preference number: 6 (lower is better)
Translates to: CQLPSTVIYQGP*SNGTNLLSRGS
Trigger: AGATCCTCTAGAAAGCAAGTTTGTGCCATTGCTGCAGGGACCCTGGTAGATTACAGTAGATGGCAGTTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563045.1
CDS CCA 72 bp GATGAAAAAGCTGGCACCAGCTGGGTTTTGGAACATTaGATTTGCCCAGAACTGCATACTTCAGCAATTCAC +
Preference number: 6 (lower is better)
Translates to: DEKAGTSWVLEH*ICPELHTSAIH
Trigger: GTGAATTGCTGAAGTATGCAGTTCTGGGCAAATCCAATGTTCCAAAACCCAGCTGGTGCCAGCTTTTTCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000563068.1
ENST00000563617.1
ENST00000564274.5
ENST00000567297.5
ENST00000568046.5
ENST00000568647.5
ENST00000568894.5
CDS CAA 72 bp GTAATCTACCAGGGTCCCTGCAGCAATGGCACAAACTaGCTTTCTAGAGGATCTAGTGTGAGTGAAATTAAA +
Preference number: 6 (lower is better)
Translates to: VIYQGPCSNGTN*LSRGSSVSEIK
Trigger: TTTAATTTCACTCACACTAGATCCTCTAGAAAGCAAGTTTGTGCCATTGCTGCAGGGACCCTGGTAGATTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563045.1
CDS CAA 72 bp CCAACATGTAGTCAGGCTGCTGAACTGTGGAAGTTATaGCTTCTTCTTACTATTTACACTATGTCAACTGCC +
Preference number: 6 (lower is better)
Translates to: PTCSQAAELWKL*LLLTIYTMSTA
Trigger: GGCAGTTGACATAGTGTAAATAGTAAGAAGAAGCAATAACTTCCACAGTTCAGCAGCCTGACTACATGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563045.1
CDS CAA 90 bp ACTGAAAGACCAACATGTAGTCAGGCTGCTGAACTGTGGAAGTTATaGCTTCTTCTTACTATTTACACTATGTCAACTGCCATCTACTGT +
Preference number: 6 (lower is better)
Translates to: TERPTCSQAAELWKL*LLLTIYTMSTAIYC
Trigger: ACAGTAGATGGCAGTTGACATAGTGTAAATAGTAAGAAGAAGCAATAACTTCCACAGTTCAGCAGCCTGACTACATGTTGGTCTTTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563045.1
CDS CCA 72 bp AGAACTGCATACTTCAGCAATTCACACAGCTGGTCATaGGTTACTTCACAGTTGTCAGTAAATAAAATGGTA +
Preference number: 6 (lower is better)
Translates to: RTAYFSNSHSWS*VTSQLSVNKMV
Trigger: TACCATTTTATTTACTGACAACTGTGAAGTAACCCATGACCAGCTGTGTGAATTGCTGAAGTATGCAGTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000261377.11
ENST00000348433.10
ENST00000563068.1
ENST00000563617.1
ENST00000564274.5
ENST00000566276.5
ENST00000566518.5
ENST00000566993.5
ENST00000567297.5
ENST00000568046.5
ENST00000568476.5
ENST00000568501.5
ENST00000568647.5
ENST00000568894.5
CDS CCA 72 bp ACTGAAAGACCAACATGTAGTCAGGCTGCTGAACTGTaGAAGTTATTGCTTCTTCTTACTATTTACACTATG +
Preference number: 6 (lower is better)
Translates to: TERPTCSQAAEL*KLLLLLTIYTM
Trigger: CATAGTGTAAATAGTAAGAAGAAGCAATAACTTCCACAGTTCAGCAGCCTGACTACATGTTGGTCTTTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563045.1