RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for REV3L (Homo sapiens)

Ensembl gene IDs: ENSG00000009413

Ensembl transcript IDs: ENST00000358835.7, ENST00000368802.8, ENST00000413831.1, ENST00000422377.5, ENST00000434009.5, ENST00000435970.5, ENST00000462119.5, ENST00000470871.1, ENST00000619481.1

Found 1529 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGGTCCTGCAGGACTTCCACTGGGCGCCTTACAAGCTGGATAAGTaGTACTCCGGGGGTCCCATAAATGATGACGTATGGCACTCGCTC +
Preference number: 1 (lower is better)
Translates to: WVLQDFHWAPYKLDK*YSGGPINDDVWHSL
Trigger: GAGCGAGTGCCATACGTCATCATTTATGGGACCCCCGGAGTACCACTTATCCAGCTTGTAAGGCGCCCAGTGGAAGTCCTGCAGGACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 90 bp AAGCTGGATAAGTGGTACTCCGGGGGTCCCATAAATGATGACGTATaGCACTCGCTCCCCAACCTGAGGCTCAGAGCGCCGGTCATAAGT +
Preference number: 1 (lower is better)
Translates to: KLDKWYSGGPINDDV*HSLPNLRLRAPVIS
Trigger: ACTTATGACCGGCGCTCTGAGCCTCAGGTTGGGGAGCGAGTGCCATACGTCATCATTTATGGGACCCCCGGAGTACCACTTATCCAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 90 bp GTAAGTAGCATTCAGTCTCAGAGTTGGGTCCTGCAGGACTTCCACTaGGCGCCTTACAAGCTGGATAAGTGGTACTCCGGGGGTCCCATA +
Preference number: 1 (lower is better)
Translates to: VSSIQSQSWVLQDFH*APYKLDKWYSGGPI
Trigger: TATGGGACCCCCGGAGTACCACTTATCCAGCTTGTAAGGCGCCCAGTGGAAGTCCTGCAGGACCCAACTCTGAGACTGAATGCTACTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 90 bp CTCCCTCAAACTCAGCCAGATCATTTGCAAGTCGAGTTTCTACCATaGGGAGCCGTCCACCAATCTCCCTGGGCTTTTCTGGTACATCAG +
Preference number: 1 (lower is better)
Translates to: LPQTQPDHLQVEFLP*GAVHQSPWAFLVHQ
Trigger: CTGATGTACCAGAAAAGCCCAGGGAGATTGGTGGACGGCTCCTCATGGTAGAAACTCGACTTGCAAATGATCTGGCTGAGTTTGAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 90 bp CTCCTGTTGACGTTCCAACTCCCGGATTTCTTGGTTGAGGATGACTaGAACATGCTGAGGTTGGCTCCGACATTTACTACAGATGCCATG +
Preference number: 1 (lower is better)
Translates to: LLLTFQLPDFLVEDD*NMLRLAPTFTTDAM
Trigger: CATGGCATCTGTAGTAAATGTCGGAGCCAACCTCAGCATGTTGCAGTCATCCTCAACCAAGAAATCCGGGAGTTGGAACGTCAACAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 90 bp AAGTCCTTCCAAGGAAAAGTCTCCCTCAAACTCAGCCAGATCATTTaGAAGTCGAGTTTCTACCATGAGGAGCCGTCCACCAATCTCCCT +
Preference number: 1 (lower is better)
Translates to: KSFQGKVSLKLSQII*KSSFYHEEPSTNLP
Trigger: AGGGAGATTGGTGGACGGCTCCTCATGGTAGAAACTCGACTTGCAAATGATCTGGCTGAGTTTGAGGGAGACTTTTCCTTGGAAGGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 90 bp AAGCATTGCCTCTTTTTCTGCAGCAGCCATGATTTCTTCAGCTCTTaGATCTGTGGGAGACCAGCAGCGAGGTGGAGAAGAATTTATGGG +
Preference number: 1 (lower is better)
Translates to: KHCLFFCSSHDFFSS*ICGRPAARWRRIYG
Trigger: CCCATAAATTCTTCTCCACCTCGCTGCTGGTCTCCCACAGATCCAAGAGCTGAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 90 bp ATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTaGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGT +
Preference number: 1 (lower is better)
Translates to: IIIFIFFGITCRGNW*QHLTFTCSLTTSRG
Trigger: ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 90 bp GCTCCTCTACTGGTGATGAGGGTCTATCATCTCCATTTAATGCTTTaGAATCTGGGGATATTGGTTGTTGCCAAGGGGGAATTACTGGAG +
Preference number: 1 (lower is better)
Translates to: APLLVMRVYHLHLML*NLGILVVAKGELLE
Trigger: CTCCAGTAATTCCCCCTTGGCAACAACCAATATCCCCAGATTCCAAAGCATTAAATGGAGATGATAGACCCTCATCACCAGTAGAGGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 90 bp AAGGATTTGCTTGGTAATATAGTAAGTAGCATTCAGTCTCAGAGTTaGGTCCTGCAGGACTTCCACTGGGCGCCTTACAAGCTGGATAAG +
Preference number: 1 (lower is better)
Translates to: KDLLGNIVSSIQSQS*VLQDFHWAPYKLDK
Trigger: CTTATCCAGCTTGTAAGGCGCCCAGTGGAAGTCCTGCAGGACCCAACTCTGAGACTGAATGCTACTTACTATATTACCAAGCAAATCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 90 bp CTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTaGTTGGTGCTTGTAAAGCAATCTGAGAATTATCAACATCCTCCT +
Preference number: 1 (lower is better)
Translates to: LVAASDFHLQFDYIP*LVLVKQSENYQHPP
Trigger: AGGAGGATGTTGATAATTCTCAGATTGCTTTACAAGCACCAACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 90 bp TTCACTGGTTTAGGATTGGTAGCAGTTACAGCTTCGGCAATTTCCTaGCCAATCTTAAAAGACTGCTCCTTAGTGGCTCCTTTCAGTAGC +
Preference number: 1 (lower is better)
Translates to: FTGLGLVAVTASAIS*PILKDCSLVAPFSS
Trigger: GCTACTGAAAGGAGCCACTAAGGAGCAGTCTTTTAAGATTGGTCAGGAAATTGCCGAAGCTGTAACTGCTACCAATCCTAAACCAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 90 bp GGAGATATGGTGCCTTGGACAATTCTCTATTTACTCGGGAGAGTTTaGAAAGTACTGGGCAGTTCAGAGAAACACATGGGATGTGTCGAT +
Preference number: 1 (lower is better)
Translates to: GDMVPWTILYLLGRV*KVLGSSEKHMGCVD
Trigger: ATCGACACATCCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAGAGAATTGTCCAAGGCACCATATCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 90 bp AAGTGCTCTGTCGATACTGAATGCCATCTGAGAAAGATAGCTTTCTaGCTGCTGTCCATAACCATCGTATGGCACATAGAGGTAAGGAAA +
Preference number: 1 (lower is better)
Translates to: KCSVDTECHLRKIAF*LLSITIVWHIEVRK
Trigger: TTTCCTTACCTCTATGTGCCATACGATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCTCAGATGGCATTCAGTATCGACAGAGCACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 90 bp TGCCTTGGACAATTCTCTATTTACTCGGGAGAGTTTGAAAAGTACTaGGCAGTTCAGAGAAACACATGGGATGTGTCGATCAAAGCAACC +
Preference number: 1 (lower is better)
Translates to: CLGQFSIYSGEFEKY*AVQRNTWDVSIKAT
Trigger: GGTTGCTTTGATCGACACATCCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAGAGAATTGTCCAAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 90 bp AAGAGACTGTCCCATTTCTTTTCTGGTGTGACCTTGAATCCAGTCTaGATTGTTTGGCTGTGGGAGGCTAAGAAACACTTCTTTGCTTAC +
Preference number: 1 (lower is better)
Translates to: KRLSHFFSGVTLNPV*IVWLWEAKKHFFAY
Trigger: GTAAGCAAAGAAGTGTTTCTTAGCCTCCCACAGCCAAACAATTCAGACTGGATTCAAGGTCACACCAGAAAAGAAATGGGACAGTCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 90 bp GCTGCTGTCCATAACCATCGTATGGCACATAGAGGTAAGGAAAGATaGCATGTAGATGAAGACATGTCTTCTGACCTATTGAGTACTATG +
Preference number: 1 (lower is better)
Translates to: AAVHNHRMAHRGKER*HVDEDMSSDLLSTM
Trigger: CATAGTACTCAATAGGTCAGAAGACATGTCTTCATCTACATGGCATCTTTCCTTACCTCTATGTGCCATACGATGGTTATGGACAGCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434009.5
3UTR CCA 90 bp TGTGACCTTTGCTTGACTCTTTGTCTTTGTGAACTTCTACCATATTaGCTGGTGTACACTGAAGCATTTCAGGAGACAGAACCTCAGAGT +
Preference number: 1 (lower is better)
Translates to: CDLCLTLCLCELLPY*LVYTEAFQETEPQS
Trigger: ACTCTGAGGTTCTGTCTCCTGAAATGCTTCAGTGTACACCAGCCAATATGGTAGAAGTTCACAAAGACAAAGAGTCAAGCAAAGGTCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 90 bp ATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATACATaGACTTACATCCATTTTTGGAGGCACTACAGGTTTGTCATCTGG +
Preference number: 1 (lower is better)
Translates to: IINILLGMCCSGEYT*TYIHFWRHYRFVIW
Trigger: CCAGATGACAAACCTGTAGTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 90 bp CAGCAGCCAGATTTATTAAATTCATGCCATAAAGATTGTAGTCAATaGAGAGCTGTAGGAGGTAGGGAATATGCGCTTCATGAGGCTGGT +
Preference number: 1 (lower is better)
Translates to: QQPDLLNSCHKDCSQ*RAVGGREYALHEAG
Trigger: ACCAGCCTCATGAAGCGCATATTCCCTACCTCCTACAGCTCTTCATTGACTACAATCTTTATGGCATGAATTTAATAAATCTGGCTGCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 90 bp CTTCTTATATACATTAGGACCCTTAAAAAGCATTGCCTCTTTTTCTaGAGCAGCCATGATTTCTTCAGCTCTTGGATCTGTGGGAGACCA +
Preference number: 1 (lower is better)
Translates to: LLIYIRTLKKHCLFF*SSHDFFSSWICGRP
Trigger: TGGTCTCCCACAGATCCAAGAGCTGAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATGCTTTTTAAGGGTCCTAATGTATATAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 90 bp GGGTCAAATTCAGGATCCGGTTCTAAGTCTCGTCTAGTTCGAGCATaGAACTCCACACTGATTAGGGTAAGATTTTGTATCTCATGTAAA +
Preference number: 1 (lower is better)
Translates to: GSNSGSGSKSRLVRA*NSTLIRVRFCISCK
Trigger: TTTACATGAGATACAAAATCTTACCCTAATCAGTGTGGAGTTGCATGCTCGAACTAGACGAGACTTAGAACCGGATCCTGAATTTGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 90 bp AATCTCCCTGGGCTTTTCTGGTACATCAGAAGGATTACTGCAAAATaGTTCCTGGTAAATAGTCTCAGACAGGTCATGATCCAACAAAGT +
Preference number: 1 (lower is better)
Translates to: NLPGLFWYIRRITAK*FLVNSLRQVMIQQS
Trigger: ACTTTGTTGGATCATGACCTGTCTGAGACTATTTACCAGGAACCATTTTGCAGTAATCCTTCTGATGTACCAGAAAAGCCCAGGGAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 90 bp ACAGCAGAGCCCATTAGTGGCATATCTTTCTGTTTAAAAAGTAGTTaGGAGCCTCCAGAACTACTTGCAAATTCAGACACATTCTGGTGT +
Preference number: 1 (lower is better)
Translates to: TAEPISGISFCLKSS*EPPELLANSDTFWC
Trigger: ACACCAGAATGTGTCTGAATTTGCAAGTAGTTCTGGAGGCTCTCAACTACTTTTTAAACAGAAAGATATGCCACTAATGGGCTCTGCTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 90 bp TACATCCATTTTTGGAGGCACTACAGGTTTGTCATCTGGGTTAACTaGAGAGCTAAAGTTCTCAGCAGATTTTACAACTCCAGTTGGCTT +
Preference number: 1 (lower is better)
Translates to: YIHFWRHYRFVIWVN*RAKVLSRFYNSSWL
Trigger: AAGCCAACTGGAGTTGTAAAATCTGCTGAGAACTTTAGCTCTTCAGTTAACCCAGATGACAAACCTGTAGTGCCTCCAAAAATGGATGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 90 bp TTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATaGATTTACAAGATGGTACACATACTGGAGCAAATCCAACACCTG +
Preference number: 1 (lower is better)
Translates to: FSVLLPLGSKHDLLK*IYKMVHILEQIQHL
Trigger: CAGGTGTTGGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR TCA 90 bp TCTCATGATAACCATAAAAAGGCATTCCTGATACTAATGACACTTTaGACACATGCTGAGCAGTGGAAGATGGATTGCCTAAAGCCACAT +
Preference number: 1 (lower is better)
Translates to: SHDNHKKAFLILMTL*THAEQWKMDCLKPH
Trigger: ATGTGGCTTTAGGCAATCCATCTTCCACTGCTCAGCATGTGTTCAAAGTGTCATTAGTATCAGGAATGCCTTTTTATGGTTATCATGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 90 bp CCTTCACCAAATGCTGAAGGTGTTGACACATTTCGATTTTTACACTaGGAAAGTGCTTTGGTTTGTGAAATTGCTTCTGATAACGACCTC +
Preference number: 1 (lower is better)
Translates to: PSPNAEGVDTFRFLH*ESALVCEIASDNDL
Trigger: GAGGTCGTTATCAGAAGCAATTTCACAAACCAAAGCACTTTCTCAGTGTAAAAATCGAAATGTGTCAACACCTTCAGCATTTGGTGAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 90 bp ACACAGAAAGAATCCATTATTGAGTTAGACCGAGTTGTTAGAGGATaGAAGCTATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTA +
Preference number: 1 (lower is better)
Translates to: TQKESIIELDRVVRG*KLFFHWLWRRFSLL
Trigger: TAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATAGCTTTCATCCTCTAACAACTCGGTCTAACTCAATAATGGATTCTTTCTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 90 bp CAAACAACTGATGGATGCAAATCATCTCGTGAACTGGGGAATGTCTaGAAATCTACAGACTTCTTGCTTTCTAAGAAAGAAGAAAAGCAG +
Preference number: 1 (lower is better)
Translates to: QTTDGCKSSRELGNV*KSTDFLLSKKEEKQ
Trigger: CTGCTTTTCTTCTTTCTTAGAAAGCAAGAAGTCTGTAGATTTGCAGACATTCCCCAGTTCACGAGATGATTTGCATCCATCAGTTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 90 bp ATTTTTGAGACTCCAGGTCCTATAGAATTACAAACAACTGATGGATaGAAATCATCTCGTGAACTGGGGAATGTCTGCAAATCTACAGAC +
Preference number: 1 (lower is better)
Translates to: IFETPGPIELQTTDG*KSSRELGNVCKSTD
Trigger: GTCTGTAGATTTGCAGACATTCCCCAGTTCACGAGATGATTTGCATCCATCAGTTGTTTGTAATTCTATAGGACCTGGAGTCTCAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 90 bp TTGATTGGACTTCTCAAGGAAGTTACAAAGCAATTATTAGGCATTTaGCTTTCCTCTGAAGCTGTATTTCCCGGAGAACAAGTTTCACTG +
Preference number: 1 (lower is better)
Translates to: LIGLLKEVTKQLLGI*LSSEAVFPGEQVSL
Trigger: CAGTGAAACTTGTTCTCCGGGAAATACAGCTTCAGAGGAAAGCCAAATGCCTAATAATTGCTTTGTAACTTCCTTGAGAAGTCCAATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 90 bp GAGGATGAAAGCTATTTTTCCACTGGTTGTGGCGACGATTCTCATTaGTATCTATGGTTGACTTCTCAAAAATTTCAGGACTTAAAGTAC +
Preference number: 1 (lower is better)
Translates to: EDESYFSTGCGDDSH*YLWLTSQKFQDLKY
Trigger: GTACTTTAAGTCCTGAAATTTTTGAGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATAGCTTTCATCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 90 bp TTGTTCAATGGATTGTCACTATTTTCATCTGCAGTTCCATCTAACTaGGGTATAGAAAGACTGGCTAGAAGCAAACTGTTATCACTCCAT +
Preference number: 1 (lower is better)
Translates to: LFNGLSLFSSAVPSN*GIERLARSKLLSLH
Trigger: ATGGAGTGATAACAGTTTGCTTCTAGCCAGTCTTTCTATACCTCAGTTAGATGGAACTGCAGATGAAAATAGTGACAATCCATTGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 90 bp CTCCTATTCAATCTAGATTTTTCACTTAGACAGTCTTCTGCCTGCTaGACACAGAAAGAATCCATTATTGAGTTAGACCGAGTTGTTAGA +
Preference number: 1 (lower is better)
Translates to: LLFNLDFSLRQSSAC*TQKESIIELDRVVR
Trigger: TCTAACAACTCGGTCTAACTCAATAATGGATTCTTTCTGTGTTCAGCAGGCAGAAGACTGTCTAAGTGAAAAATCTAGATTGAATAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 90 bp TCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATACATTGTCGCTaGACATACTGTTTAATTAGACTTATATCTCTCGTTTCAAATAGC +
Preference number: 1 (lower is better)
Translates to: SCMLAFPSRSFIHCR*TYCLIRLISLVSNS
Trigger: GCTATTTGAAACGAGAGATATAAGTCTAATTAAACAGTATGTTCAGCGACAATGTATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 90 bp AGAATTAACAGTCTTCTTATATACATTAGGACCCTTAAAAAGCATTaGCTCTTTTTCTGCAGCAGCCATGATTTCTTCAGCTCTTGGATC +
Preference number: 1 (lower is better)
Translates to: RINSLLIYIRTLKKH*LFFCSSHDFFSSWI
Trigger: GATCCAAGAGCTGAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATGCTTTTTAAGGGTCCTAATGTATATAAGAAGACTGTTAATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 90 bp TGTTCCCACCGAAATAAAGTATCAGCAAGAGAATTTCCTGATAAATaGTTCTTGCAGGATCCAGTTGCATGCAATGTATTACTTTTCCTT +
Preference number: 1 (lower is better)
Translates to: CSHRNKVSAREFPDK*FLQDPVACNVLLFL
Trigger: AAGGAAAAGTAATACATTGCATGCAACTGGATCCTGCAAGAATCATTTATCAGGAAATTCTCTTGCTGATACTTTATTTCGGTGGGAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 90 bp TTAAGTTTATTTAGTCCACTTTCATCAGCAGTGCTATTAAGAGAATaGACCATAGTTCTATTCTCCCCTGAGCATGACAGTAATTCACAA +
Preference number: 1 (lower is better)
Translates to: LSLFSPLSSAVLLRE*TIVLFSPEHDSNSQ
Trigger: TTGTGAATTACTGTCATGCTCAGGGGAGAATAGAACTATGGTGCATTCTCTTAATAGCACTGCTGATGAAAGTGGACTAAATAAACTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 90 bp CACACAAATGCTTTTTCTTTAAGAGGTTTTCAGTGCTCCTTCCACTaGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTAC +
Preference number: 1 (lower is better)
Translates to: HTNAFSLRGFQCSFH*EVNMIYSNEFTRWY
Trigger: GTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCTTAAAGAAAAAGCATTTGTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR TCA 90 bp TTCCAGAAGTTTTCTCTGTATGATTGGTGTACTATGAAAGCAAAGTaGTTCACATTTCCCAGTTCTTGCCCTAGTATTAATTGGAGATAT +
Preference number: 1 (lower is better)
Translates to: FQKFSLYDWCTMKAK*FTFPSSCPSINWRY
Trigger: ATATCTCCAATTAATACTAGGGCAAGAACTGGGAAATGTGAATCACTTTGCTTTCATAGTACACCAATCATACAGAGAAAACTTCTGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 90 bp ATGGAGGGTTTAACTGAAAGCTTGCTTGTTGCAATTACAGAAGAGTaGGTTCTAGAATTTTCATTGTTCAATGGATTGTCACTATTTTCA +
Preference number: 1 (lower is better)
Translates to: MEGLTESLLVAITEE*VLEFSLFNGLSLFS
Trigger: TGAAAATAGTGACAATCCATTGAACAATGAAAATTCTAGAACCCACTCTTCTGTAATTGCAACAAGCAAGCTTTCAGTTAAACCCTCCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTCAGCTCTTGGATCTGTaGGAGACCAGCAGCGAGGTG +
Preference number: 2 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGQLLDL*ETSSEV
Trigger: CACCTCGCTGCTGGTCTCCCACAGATCCAAGAGCTG...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp CTATTTACTCGGGAGAGTTTGAAAAGTACTGGGCAGTTCAGAGAAACACATGGGACTCGCTCCCCAACCTaGGGCTCAGAGCGCCGGTCA +
Preference number: 2 (lower is better)
Translates to: LFTRESLKSTGQFRETHGTRSPT*GSERRS
Trigger: TGACCGGCGCTCTGAGCCTCAGGTTGGGGAGCGAGT...CCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp TTTGCAAGTCGAGTTTCTACCATGAGGAGCCGTCCACCAATCTCCCTGGGCTTTGTGCTGCTTGCTGGCTaGGGCTTGGCTTTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: FASRVSTMRSRPPISLGFVLLAG*GLAFLF
Trigger: AAACAGAAAAGCCAAGCCTCAGCCAGCAAGCAGCAC...AAAGCCCAGGGAGATTGGTGGACGGCTCCTCATGGTAGAAACTCGACTTGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACCAGCTCTTGGATCTGTaGGAGACCAGCAGCGAGGTG +
Preference number: 2 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHQLLDL*ETSSEV
Trigger: CACCTCGCTGCTGGTCTCCCACAGATCCAAGAGCTG...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTAGTTCGAGGTTTTCTTaGGGACGTTACCGATCGTGT +
Preference number: 2 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGSSRFS*GRYRSC
Trigger: ACACGATCGGTAACGTCCCCAAGAAAACCTCGAACT...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp TTTGCAAGTCGAGTTTCTACCATGAGGAGCCGTCCACCAATCTCCCTGGGCTTTAGTGTGACCTTTGCTTaGCTCTTTGTCTTTGTGAAC +
Preference number: 2 (lower is better)
Translates to: FASRVSTMRSRPPISLGFSVTFA*LFVFVN
Trigger: GTTCACAAAGACAAAGAGTCAAGCAAAGGTCACACT...AAAGCCCAGGGAGATTGGTGGACGGCTCCTCATGGTAGAAACTCGACTTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACCCTGGCCTTGGATTCTaGGTCATTGCTGAGAATGCT +
Preference number: 2 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHPGLGF*VIAENA
Trigger: AGCATTCTCAGCAATGACTCAGAATCCAAGGCCAGG...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTCTCAGCCAGATCATTTaGAAGTCGAGTTTCTACCAT +
Preference number: 2 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGLSQII*KSSFYH
Trigger: ATGGTAGAAACTCGACTTGCAAATGATCTGGCTGAG...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 90 bp TTTCCTCTGAAGCTGTATTTCCCGGAGAACAAGTTTCACTGTGCTTaGACTGTTCCGCTATGCACACAATCTGCTGCTGACTGTCTTTGC +
Preference number: 2 (lower is better)
Translates to: FPLKLYFPENKFHCA*TVPLCTQSAADCLC
Trigger: GCAAAGACAGTCAGCAGCAGATTGTGTGCATAGCGGAACAGTCAAAGCACAGTGAAACTTGTTCTCCGGGAAATACAGCTTCAGAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 90 bp TATCTTTACAAGTTGCTCCTGTTGACGTTCCAACTCCCGGATTTCTaGGTTGAGGATGACTGCAACATGCTGAGGTTGGCTCCGACATTT +
Preference number: 2 (lower is better)
Translates to: YLYKLLLLTFQLPDF*VEDDCNMLRLAPTF
Trigger: AAATGTCGGAGCCAACCTCAGCATGTTGCAGTCATCCTCAACCAAGAAATCCGGGAGTTGGAACGTCAACAGGAGCAACTTGTAAAGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTGCCATTTTTAGATTGTaGAGGAGAGCTAGTAGATCT +
Preference number: 2 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGAIFRL*RRASRS
Trigger: AGATCTACTAGCTCTCCTTCACAATCTAAAAATGGC...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp TCATTGATTCCACACGGTACTGTGAACCCCTTGTCAGTACATGTAAAAACTGAAATCACTAGAGGCTCTTaGGGCTCACTGCAGGGGCTT +
Preference number: 2 (lower is better)
Translates to: SLIPHGTVNPLSVHVKTEITRGS*GSLQGL
Trigger: AAGCCCCTGCAGTGAGCCTCAAGAGCCTCTAGTGAT...TTCAGTTTTTACATGTACTGACAAGGGGTTCACAGTACCGTGTGGAATCAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp CCAATGAAGGCAGCTCCTCTACTGGTGATGAGGGTCTATCATCTCCATTTAATGGGAATCTGGGGATATTaGTTGTTGCCAAGGGGGAAT +
Preference number: 2 (lower is better)
Translates to: PMKAAPLLVMRVYHLHLMGIWGY*LLPRGN
Trigger: ATTCCCCCTTGGCAACAACCAATATCCCCAGATTCC...CATTAAATGGAGATGATAGACCCTCATCACCAGTAGAGGAGCTGCCTTCATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 90 bp CAGTTTCTTGGAACGTTCGTATTCTTCTTTGGCTTGAAGCCACACTaGAACCAGTTGTCGACTTGGGGCACATTTGCAAGGCATAATCAC +
Preference number: 2 (lower is better)
Translates to: QFLGTFVFFFGLKPH*NQLSTWGTFARHNH
Trigger: GTGATTATGCCTTGCAAATGTGCCCCAAGTCGACAACTGGTTCAAGTGTGGCTTCAAGCCAAAGAAGAATACGAACGTTCCAAGAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 90 bp CTTGGTTTTAGGCAGTTTCTTGGAACGTTCGTATTCTTCTTTGGCTaGAAGCCACACTTGAACCAGTTGTCGACTTGGGGCACATTTGCA +
Preference number: 2 (lower is better)
Translates to: LGFRQFLGTFVFFFG*KPHLNQLSTWGTFA
Trigger: TGCAAATGTGCCCCAAGTCGACAACTGGTTCAAGTGTGGCTTCAAGCCAAAGAAGAATACGAACGTTCCAAGAAACTGCCTAAAACCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 90 bp GTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTaGGTGCTTGTAAAGCAATCTGAGAATTATCAACATCCTCCTTGG +
Preference number: 2 (lower is better)
Translates to: VAASDFHLQFDYIPW*VLVKQSENYQHPPW
Trigger: CCAAGGAGGATGTTGATAATTCTCAGATTGCTTTACAAGCACCAACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 90 bp AGCTCCTCTACTGGTGATGAGGGTCTATCATCTCCATTTAATGCTTaGGAATCTGGGGATATTGGTTGTTGCCAAGGGGGAATTACTGGA +
Preference number: 2 (lower is better)
Translates to: SSSTGDEGLSSPFNA*ESGDIGCCQGGITG
Trigger: TCCAGTAATTCCCCCTTGGCAACAACCAATATCCCCAGATTCCAAAGCATTAAATGGAGATGATAGACCCTCATCACCAGTAGAGGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp TTAGGCATTTGGCTTTCCTCTGAAGCTGTATTTCCCGGAGAACAAGTTTCACTGCCCCAGGAATGCATCTaGATCTCATATCCTAGCAGA +
Preference number: 2 (lower is better)
Translates to: LGIWLSSEAVFPGEQVSLPQECI*ISYPSR
Trigger: TCTGCTAGGATATGAGATTCAGATGCATTCCTGGGG...CAGTGAAACTTGTTCTCCGGGAAATACAGCTTCAGAGGAAAGCCAAATGCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp TTATCATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTGGCGTCCATGAAAACAGGTaGCTCACTCAGTCTTTGGGT +
Preference number: 2 (lower is better)
Translates to: LSSSSSSFSGSLAEATGGVHENR*LTQSLG
Trigger: ACCCAAAGACTGAGTGAGTCACCTGTTTTCATGGAC...GCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp CCAATGAAGGCAGCTCCTCTACTGGTGATGAGGGTCTATCATCTCCATTTAATGGTCATCTGGGTTAACTaGAGAGCTAAAGTTCTCAGC +
Preference number: 2 (lower is better)
Translates to: PMKAAPLLVMRVYHLHLMVIWVN*RAKVLS
Trigger: GCTGAGAACTTTAGCTCTTCAGTTAACCCAGATGAC...CATTAAATGGAGATGATAGACCCTCATCACCAGTAGAGGAGCTGCCTTCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp CTATTTACTCGGGAGAGTTTGAAAAGTACTGGGCAGTTCAGAGAAACACATGGGAGACCAGCAGCGAGGTaGAGAAGAATTTATGGGACT +
Preference number: 2 (lower is better)
Translates to: LFTRESLKSTGQFRETHGRPAAR*RRIYGT
Trigger: AGTCCCATAAATTCTTCTCCACCTCGCTGCTGGTCT...CCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTTTTGTTTTGTACTTCTaGGAGTTCGAGGTTTTCTTG +
Preference number: 2 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGFVLYF*EFEVFL
Trigger: CAAGAAAACCTCGAACTCCCAGAAGTACAAAACAAA...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp TTATCATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTGGCAACCAGTTGTCGACTTaGGGCACATTTGCAAGGCAT +
Preference number: 2 (lower is better)
Translates to: LSSSSSSFSGSLAEATGGNQLST*GTFARH
Trigger: ATGCCTTGCAAATGTGCCCCAAGTCGACAACTGGTT...GCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATTGCAGAGGCAACTGGTaGCAGCATCTGACTTTCACT +
Preference number: 2 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHCRGNW*QHLTFT
Trigger: AGTGAAAGTCAGATGCTGCCACCAGTTGCCTCTGCA...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp GACTCGAAAGGTAAAGAGGGGAAAACGCTGATGAAGAACATGAAAGCTCACATTCCCCAGGAATGCATCTaGATCTCATATCCTAGCAGA +
Preference number: 2 (lower is better)
Translates to: DSKGKEGKTLMKNMKAHIPQECI*ISYPSR
Trigger: TCTGCTAGGATATGAGATTCAGATGCATTCCTGGGG...AATGTGAGCTTTCATGTTCTTCATCAGCGTTTTCCCCTCTTTACCTTTCGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATTTGGCTGGTGTACACTaGAGCATTTCAGGAGACAGA +
Preference number: 2 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHLAGVH*SISGDR
Trigger: TCTGTCTCCTGAAATGCTTCAGTGTACACCAGCCAA...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGGTGCTGCTTGCTGGCTaGGGCTTGGCTTTTCTGTTT +
Preference number: 2 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQVLLAG*GLAFLF
Trigger: AAACAGAAAAGCCAAGCCTCAGCCAGCAAGCAGCAC...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp TCTCAGAGAGGTACAGCCAAATTTGAACTCATCATACTTTCCCAAGTTCTCCACATCTGGGATCTTTGCTaGACACTAGGTGTCACAGGA +
Preference number: 2 (lower is better)
Translates to: SQRGTAKFELIILSQVLHIWDLC*TLGVTG
Trigger: TCCTGTGACACCTAGTGTTCAGCAAAGATCCCAGAT...GTGGAGAACTTGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTCTCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGACAAGTTGCTCCTGTTaGCGTTCCAACTCCCGGATT +
Preference number: 2 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQTSCSC*RSNSRI
Trigger: AATCCGGGAGTTGGAACGTCAACAGGAGCAACTTGT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACCATTGCCTCTTTTTCTaGAGCAGCCATGATTTCTTC +
Preference number: 2 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHHCLFF*SSHDFF
Trigger: GAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATG...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp CCAATGAAGGCAGCTCCTCTACTGGTGATGAGGGTCTATCATCTCCATTTAATGGAACAAGTTTCACTGTaGTTTGACTGTTCCGCTATG +
Preference number: 2 (lower is better)
Translates to: PMKAAPLLVMRVYHLHLMEQVSL*FDCSAM
Trigger: CATAGCGGAACAGTCAAAGCACAGTGAAACTTGTTC...CATTAAATGGAGATGATAGACCCTCATCACCAGTAGAGGAGCTGCCTTCATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp TTATCATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTGGCATCCTCCTTGGTATGTaGTGTAGTGGGGAGTATACA +
Preference number: 2 (lower is better)
Translates to: LSSSSSSFSGSLAEATGGILLGM*CSGEYT
Trigger: TGTATACTCCCCACTACAGCACATACCAAGGAGGAT...GCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAGATGGTACACATACTaGAGCAAATCCAACACCTGC +
Preference number: 2 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCRWYTY*SKSNTC
Trigger: GCAGGTGTTGGATTTGCTCCAGTATGTGTACCATCT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR-3UTR CCA 90 bp TTAGGCATTTGGCTTTCCTCTGAAGCTGTATTTCCCGGAGAACAAGTTTCACTGGATAAATGGGATATTTaGTTGCAGGGGAGTCGGGAA +
Preference number: 2 (lower is better)
Translates to: LGIWLSSEAVFPGEQVSLDKWDI*LQGSRE
Trigger: TTCCCGACTCCCCTGCAACCAAATATCCCATTTATC...CAGTGAAACTTGTTCTCCGGGAAATACAGCTTCAGAGGAAAGCCAAATGCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp TTAAAAGACTGCTCCTTAGTGGCTCCTTTCAGTAGCACAAACATACTGTCAGTATTGGCTGGTGTACACTaGAGCATTTCAGGAGACAGA +
Preference number: 2 (lower is better)
Translates to: LKDCSLVAPFSSTNILSVLAGVH*SISGDR
Trigger: TCTGTCTCCTGAAATGCTTCAGTGTACACCAGCCAA...TACTGACAGTATGTTTGTGCTACTGAAAGGAGCCACTAAGGAGCAGTCTTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATATGCAAATCATCTCGTaGACTGGGGAATGTCTGCAA +
Preference number: 2 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHMQIIS*TGECLQ
Trigger: TTGCAGACATTCCCCAGTTCACGAGATGATTTGCAT...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp CTATTTACTCGGGAGAGTTTGAAAAGTACTGGGCAGTTCAGAGAAACACATGGGGATGGGACTATCATCTaGTACAGAGTTATCCAACTG +
Preference number: 2 (lower is better)
Translates to: LFTRESLKSTGQFRETHGDGTII*YRVIQL
Trigger: CAGTTGGATAACTCTGTATCAGATGATAGTCCCATC...CCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATAAAAGAGGTATTGGCTaGGTCAAGAGACTGTCCCAT +
Preference number: 2 (lower is better)
Translates to: SNLRIINILLGMCCSGEYKRGIG*VKRLSH
Trigger: ATGGGACAGTCTCTTGACTCAGCCAATACCTCTTTT...ATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp CCAATGAAGGCAGCTCCTCTACTGGTGATGAGGGTCTATCATCTCCATTTAATGAATGTTCTTCAATATTaGTGTCCCATCTCTGGGACA +
Preference number: 2 (lower is better)
Translates to: PMKAAPLLVMRVYHLHLMNVLQY*CPISGT
Trigger: TGTCCCAGAGATGGGACAGCAATATTGAAGAACATT...CATTAAATGGAGATGATAGACCCTCATCACCAGTAGAGGAGCTGCCTTCATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGAAACATATAGTGTGCTaGTTGCTGGCTGAGGCTTGG +
Preference number: 2 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQKHIVC*LLAEAW
Trigger: CCAAGCCTCAGCCAGCAAGCAGCACACTATATGTTT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATAGATGGTACACATACTaGAGCAAATCCAACACCTGC +
Preference number: 2 (lower is better)
Translates to: SNLRIINILLGMCCSGEYRWYTY*SKSNTC
Trigger: GCAGGTGTTGGATTTGCTCCAGTATGTGTACCATCT...ATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp TCTCAGAGAGGTACAGCCAAATTTGAACTCATCATACTTTCCCAAGTTCTCCACACACATGCTGAGCAGTaGAAGATGGATTGCCTAAAG +
Preference number: 2 (lower is better)
Translates to: SQRGTAKFELIILSQVLHTHAEQ*KMDCLK
Trigger: CTTTAGGCAATCCATCTTCCACTGCTCAGCATGTGT...GTGGAGAACTTGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTCTCTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp TCTCAGAGAGGTACAGCCAAATTTGAACTCATCATACTTTCCCAAGTTCTCCACTTTCATCTTCCCATATaGCCTGTAGACCAGGGTTTC +
Preference number: 2 (lower is better)
Translates to: SQRGTAKFELIILSQVLHFHLPI*PVDQGF
Trigger: GAAACCCTGGTCTACAGGCCATATGGGAAGATGAAA...GTGGAGAACTTGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTCTCTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp TCTGATCAGCTGGGACAAACTGACTTCCAGAATAAAAGCTACAAAATCCAGTCTGATTTCTTCAGCTCTTaGATCTGTGGGAGACCAGCA +
Preference number: 2 (lower is better)
Translates to: SDQLGQTDFQNKSYKIQSDFFSS*ICGRPA
Trigger: TGCTGGTCTCCCACAGATCCAAGAGCTGAAGAAATC...AGACTGGATTTTGTAGCTTTTATTCTGGAAGTCAGTTTGTCCCAGCTGATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp TCTGATCAGCTGGGACAAACTGACTTCCAGAATAAAAGCTACAAAATCCAGTCTAGTTCGAGGTTTTCTTaGGGACGTTACCGATCGTGT +
Preference number: 2 (lower is better)
Translates to: SDQLGQTDFQNKSYKIQSSSRFS*GRYRSC
Trigger: ACACGATCGGTAACGTCCCCAAGAAAACCTCGAACT...AGACTGGATTTTGTAGCTTTTATTCTGGAAGTCAGTTTGTCCCAGCTGATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp CTATTTACTCGGGAGAGTTTGAAAAGTACTGGGCAGTTCAGAGAAACACATGGGCAAATTCTGATCAGCTaGGACAAACTGACTTCCAGA +
Preference number: 2 (lower is better)
Translates to: LFTRESLKSTGQFRETHGQILIS*DKLTSR
Trigger: TCTGGAAGTCAGTTTGTCCCAGCTGATCAGAATTTG...CCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 90 bp GTATTTCTGCACAGTGATCTCTTTTTGGCACAATGTTCTTCAATATaGCTGTCCCATCTCTGGGACATCACCAAACTAAGCTCCATTTCC +
Preference number: 2 (lower is better)
Translates to: VFLHSDLFLAQCSSI*LSHLWDITKLSSIS
Trigger: GGAAATGGAGCTTAGTTTGGTGATGTCCCAGAGATGGGACAGCAATATTGAAGAACATTGTGCCAAAAAGAGATCACTGTGCAGAAATAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCACATCCTTGACTCGATaGAAGTTAAAAAGCACCATG +
Preference number: 2 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCTSLTR*KLKSTM
Trigger: CATGGTGCTTTTTAACTTTCATCGAGTCAAGGATGT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR-3UTR TCA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATCGAAGTAACACGTCTTaGTACAGACAGTTCAAGGAA +
Preference number: 2 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHRSNTS*YRQFKE
Trigger: TTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCG...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp TCTCAGAGAGGTACAGCCAAATTTGAACTCATCATACTTTCCCAAGTTCTCCACCGAAGTAACACGTCTTaGTACAGACAGTTCAAGGAA +
Preference number: 2 (lower is better)
Translates to: SQRGTAKFELIILSQVLHRSNTS*YRQFKE
Trigger: TTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCG...GTGGAGAACTTGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTCTCTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGACTTTGAACACATGCTaGGCAGTGGAAGATGGATTG +
Preference number: 2 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQTLNTC*AVEDGL
Trigger: CAATCCATCTTCCACTGCTCAGCATGTGTTCAAAGT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp AAAGTGATTGGAAATCCAAAACGAGAACAGAGTTGCTATAGAAGCGGGATTCAGACTTTGAACACATGCTaGGCAGTGGAAGATGGATTG +
Preference number: 2 (lower is better)
Translates to: KVIGNPKREQSCYRSGIQTLNTC*AVEDGL
Trigger: CAATCCATCTTCCACTGCTCAGCATGTGTTCAAAGT...CTGAATCCCGCTTCTATAGCAACTCTGTTCTCGTTTTGGATTTCCAATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp GACATAAGTGGTTTCAGAATGTTAGCAGTTCGAGGGGTGAAGCTGCCATTTTTAACTTTGTGTCTAGTGTaGCCTTTGCTTGACTCTTTG +
Preference number: 2 (lower is better)
Translates to: DISGFRMLAVRGVKLPFLTLCLV*PLLDSL
Trigger: CAAAGAGTCAAGCAAAGGTCACACTAGACACAAAGT...TAAAAATGGCAGCTTCACCCCTCGAACTGCTAACATTCTGAAACCACTTATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp GGCGACGATTCTCATTGCTATCTATGGTTGACTTCTCAAAAATTTCAGGACTTAGTCCATGAAAACAGGTaGCTCACTCAGTCTTTGGGT +
Preference number: 2 (lower is better)
Translates to: GDDSHCYLWLTSQKFQDLVHENR*LTQSLG
Trigger: ACCCAAAGACTGAGTGAGTCACCTGTTTTCATGGAC...TAAGTCCTGAAATTTTTGAGAAGTCAACCATAGATAGCAATGAGAATCGTCGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp CCCTTAAAAAGCATTGCCTCTTTTTCTGCAGCAGCCATGATTTCTTCAGCTCTTGATGGAGGGTTTAACTaGAAGCTTGCTTGTTGCAAT +
Preference number: 2 (lower is better)
Translates to: PLKSIASFSAAAMISSALDGGFN*KLACCN
Trigger: ATTGCAACAAGCAAGCTTTCAGTTAAACCCTCCATC...AAGAGCTGAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATGCTTTTTAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp GACATAAGTGGTTTCAGAATGTTAGCAGTTCGAGGGGTGAAGCTGCCATTTTTACCCATGCTATTTGTTTaGTTGGACTTCTCAAGGAAG +
Preference number: 2 (lower is better)
Translates to: DISGFRMLAVRGVKLPFLPMLFV*LDFSRK
Trigger: CTTCCTTGAGAAGTCCAATCAAACAAATAGCATGGG...TAAAAATGGCAGCTTCACCCCTCGAACTGCTAACATTCTGAAACCACTTATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp CCAATGAAGGCAGCTCCTCTACTGGTGATGAGGGTCTATCATCTCCATTTAATGCAGGATCCAGTTGCATaGAATGTATTACTTTTCCTT +
Preference number: 2 (lower is better)
Translates to: PMKAAPLLVMRVYHLHLMQDPVA*NVLLFL
Trigger: AAGGAAAAGTAATACATTGCATGCAACTGGATCCTG...CATTAAATGGAGATGATAGACCCTCATCACCAGTAGAGGAGCTGCCTTCATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp CCAATGAAGGCAGCTCCTCTACTGGTGATGAGGGTCTATCATCTCCATTTAATGCTTGCAGGATCCAGTTaGATGCAATGTATTACTTTT +
Preference number: 2 (lower is better)
Translates to: PMKAAPLLVMRVYHLHLMLAGSS*MQCITF
Trigger: AAAAGTAATACATTGCATGCAACTGGATCCTGCAAG...CATTAAATGGAGATGATAGACCCTCATCACCAGTAGAGGAGCTGCCTTCATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp GGCGACGATTCTCATTGCTATCTATGGTTGACTTCTCAAAAATTTCAGGACTTAAAACATATAGTGTGCTaGTTGCTGGCTGAGGCTTGG +
Preference number: 2 (lower is better)
Translates to: GDDSHCYLWLTSQKFQDLKHIVC*LLAEAW
Trigger: CCAAGCCTCAGCCAGCAAGCAGCACACTATATGTTT...TAAGTCCTGAAATTTTTGAGAAGTCAACCATAGATAGCAATGAGAATCGTCGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCTGCCGGAGATATGGTaGCTTGGACAATTCTCTATT +
Preference number: 2 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLPEIW*LGQFSI
Trigger: AATAGAGAATTGTCCAAGGCACCATATCTCCGGCAG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATACTCAATTTTGTCATCTaGCACCCGAGAGATCATCCG +
Preference number: 2 (lower is better)
Translates to: LCSCATSFSYTRINSLLILNFVI*HPRDHP
Trigger: CGGATGATCTCTCGGGTGCCAGATGACAAAATTGAG...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp CCCTTAAAAAGCATTGCCTCTTTTTCTGCAGCAGCCATGATTTCTTCAGCTCTTAGAAAGATAGCTTTCTaGCTGCTGTCCATAACCATC +
Preference number: 2 (lower is better)
Translates to: PLKSIASFSAAAMISSALRKIAF*LLSITI
Trigger: GATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCT...AAGAGCTGAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATGCTTTTTAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp TTTGGCTGTGGGAGGCTAAGAAACACTTCTTTGCTTACTGAACTCCTATTCAATACACATGCTGAGCAGTaGAAGATGGATTGCCTAAAG +
Preference number: 2 (lower is better)
Translates to: FGCGRLRNTSLLTELLFNTHAEQ*KMDCLK
Trigger: CTTTAGGCAATCCATCTTCCACTGCTCAGCATGTGT...ATTGAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAGCCTCCCACAGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp TTATCATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTGGCTTCACAGGAAGATACTaGGAGGATCTCTTTCTTACT +
Preference number: 2 (lower is better)
Translates to: LSSSSSSFSGSLAEATGGFTGRY*EDLFLT
Trigger: AGTAAGAAAGAGATCCTCCCAGTATCTTCCTGTGAA...GCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp TCTCAGAGAGGTACAGCCAAATTTGAACTCATCATACTTTCCCAAGTTCTCCACTTGCTGGCTGAGGCTTaGCTTTTCTGTTTTATGTTC +
Preference number: 2 (lower is better)
Translates to: SQRGTAKFELIILSQVLHLLAEA*LFCFMF
Trigger: GAACATAAAACAGAAAAGCCAAGCCTCAGCCAGCAA...GTGGAGAACTTGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTCTCTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp GACATAAGTGGTTTCAGAATGTTAGCAGTTCGAGGGGTGAAGCTGCCATTTTTAGTGGAGAAGAATTTATaGGACTTGTGCTTCTCTCAG +
Preference number: 2 (lower is better)
Translates to: DISGFRMLAVRGVKLPFLVEKNL*DLCFSQ
Trigger: CTGAGAGAAGCACAAGTCCCATAAATTCTTCTCCAC...TAAAAATGGCAGCTTCACCCCTCGAACTGCTAACATTCTGAAACCACTTATGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATATGAGGCTGAGTCTGTaGTATGATGCTTGTCTTCAT +
Preference number: 2 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHMRLSL*YDACLH
Trigger: ATGAAGACAAGCATCATACCACAGACTCAGCCTCAT...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp CCAATGAAGGCAGCTCCTCTACTGGTGATGAGGGTCTATCATCTCCATTTAATGAGGATTACTGCAAAATaGTTCCTGGTAAATAGTCTC +
Preference number: 2 (lower is better)
Translates to: PMKAAPLLVMRVYHLHLMRITAK*FLVNSL
Trigger: GAGACTATTTACCAGGAACCATTTTGCAGTAATCCT...CATTAAATGGAGATGATAGACCCTCATCACCAGTAGAGGAGCTGCCTTCATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCTCCCTGGGCTTTTCTaGTACATCAGAAGGATTACT +
Preference number: 2 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLPGLF*YIRRIT
Trigger: AGTAATCCTTCTGATGTACCAGAAAAGCCCAGGGAG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp CTATTTACTCGGGAGAGTTTGAAAAGTACTGGGCAGTTCAGAGAAACACATGGGTTTTGCATCAAATACTaGGTCCTTCTGATCCAGTGT +
Preference number: 2 (lower is better)
Translates to: LFTRESLKSTGQFRETHGFCIKY*VLLIQC
Trigger: ACACTGGATCAGAAGGACCCAGTATTTGATGCAAAA...CCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 90 bp ACTGAAGAGCTAAAGTTCTCAGCAGATTTTACAACTCCAGTTGGCTaGGTTTTAGGCAGTTTCTTGGAACGTTCGTATTCTTCTTTGGCT +
Preference number: 2 (lower is better)
Translates to: TEELKFSADFTTPVG*VLGSFLERSYSSLA
Trigger: AGCCAAAGAAGAATACGAACGTTCCAAGAAACTGCCTAAAACCAAGCCAACTGGAGTTGTAAAATCTGCTGAGAACTTTAGCTCTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 90 bp GGGAGTATACATGGACTTACATCCATTTTTGGAGGCACTACAGGTTaGTCATCTGGGTTAACTGAAGAGCTAAAGTTCTCAGCAGATTTT +
Preference number: 2 (lower is better)
Translates to: GSIHGLTSIFGGTTG*SSGLTEELKFSADF
Trigger: AAAATCTGCTGAGAACTTTAGCTCTTCAGTTAACCCAGATGACAAACCTGTAGTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTCCCCAGGAATGCATCTaGATCTCATATCCTAGCAGA +
Preference number: 2 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSPQECI*ISYPSR
Trigger: TCTGCTAGGATATGAGATTCAGATGCATTCCTGGGG...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATTTGCTTTTCGGAACTTaGCAGCAGCCAGATTTATTA +
Preference number: 2 (lower is better)
Translates to: SNLRIINILLGMCCSGEYLLFGT*QQPDLL
Trigger: TAATAAATCTGGCTGCTGTCAAGTTCCGAAAAGCAA...ATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp CCCTTAAAAAGCATTGCCTCTTTTTCTGCAGCAGCCATGATTTCTTCAGCTCTTGACTCTTTGTCTTTGTaGACTTCTACCATATTGGCT +
Preference number: 2 (lower is better)
Translates to: PLKSIASFSAAAMISSALDSLSL*TSTILA
Trigger: AGCCAATATGGTAGAAGTTCACAAAGACAAAGAGTC...AAGAGCTGAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATGCTTTTTAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp GACATAAGTGGTTTCAGAATGTTAGCAGTTCGAGGGGTGAAGCTGCCATTTTTAGTATTCTCGTTAGGGTaGCGGTGCATATGTATAAAA +
Preference number: 2 (lower is better)
Translates to: DISGFRMLAVRGVKLPFLVFSLG*RCICIK
Trigger: TTTTATACATATGCACCGTCACCCTAACGAGAATAC...TAAAAATGGCAGCTTCACCCCTCGAACTGCTAACATTCTGAAACCACTTATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTAGTTTCACTGTGCTTTaGCTGTTCCGCTATGCACAC +
Preference number: 2 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFSFTVL*LFRYAH
Trigger: GTGTGCATAGCGGAACAGTCAAAGCACAGTGAAACT...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp TTAAAAGACTGCTCCTTAGTGGCTCCTTTCAGTAGCACAAACATACTGTCAGTACTTAGGGCTATTACTTaGCCCTTTATTGACAACTCC +
Preference number: 2 (lower is better)
Translates to: LKDCSLVAPFSSTNILSVLRAIT*PFIDNS
Trigger: GGAGTTGTCAATAAAGGGTCAAGTAATAGCCCTAAG...TACTGACAGTATGTTTGTGCTACTGAAAGGAGCCACTAAGGAGCAGTCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGAATACTGGGTCCTTCTaGTCCAGTGTTTCATACATG +
Preference number: 2 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQNTGSF*SSVSYM
Trigger: CATGTATGAAACACTGGATCAGAAGGACCCAGTATT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATTCTGTCGATACTGAATaGCATCTGAGAAAGATAGCT +
Preference number: 2 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHSVDTE*HLRKIA
Trigger: AGCTATCTTTCTCAGATGGCATTCAGTATCGACAGA...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATTTTTTCACTTTCTGTTaGTGGCACAAACCTGTGATC +
Preference number: 2 (lower is better)
Translates to: SNLRIINILLGMCCSGEYFFTFC*WHKPVI
Trigger: GATCACAGGTTTGTGCCAGCAACAGAAAGTGAAAAA...ATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATAGACAGAACCTCAGAGTaGAATGTTAACTCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: LCSCATSFSYTRINSLLIDRTSE*NVNSAE
Trigger: CTCTGCTGAGTTAACATTGCACTCTGAGGTTCTGTC...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp CCAATGAAGGCAGCTCCTCTACTGGTGATGAGGGTCTATCATCTCCATTTAATGAATTTATGGGACTTGTaGTTCTCTCAGAAAGAAAAC +
Preference number: 2 (lower is better)
Translates to: PMKAAPLLVMRVYHLHLMNLWDL*FSQKEN
Trigger: GTTTTCTTTCTGAGAGAAGCACAAGTCCCATAAATT...CATTAAATGGAGATGATAGACCCTCATCACCAGTAGAGGAGCTGCCTTCATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATCTTAATCTGTGCTCTTaGGCGACTAGTTTTTCCTAT +
Preference number: 2 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHLNLCS*ATSFSY
Trigger: ATAGGAAAAACTAGTCGCGCAAGAGCACAGATTAAG...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGAAACGAGAACAGAGTTaGTATAGAAGCGGGATTCAG +
Preference number: 2 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQKREQS*YRSGIQ
Trigger: CTGAATCCCGCTTCTATAGCAACTCTGTTCTCGTTT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTAGATGGTACACATACTaGAGCAAATCCAACACCTGC +
Preference number: 2 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFRWYTY*SKSNTC
Trigger: GCAGGTGTTGGATTTGCTCCAGTATGTGTACCATCT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR-3UTR CCA 90 bp TTTGGCTGTGGGAGGCTAAGAAACACTTCTTTGCTTACTGAACTCCTATTCAATTTCACTTTCTGTTGCTaGCACAAACCTGTGATCTTG +
Preference number: 2 (lower is better)
Translates to: FGCGRLRNTSLLTELLFNFTFCC*HKPVIL
Trigger: CAAGATCACAGGTTTGTGCCAGCAACAGAAAGTGAA...ATTGAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAGCCTCCCACAGCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATTCAGTTGAACTTCTGTaGGTATTTCTGCACAGTGAT +
Preference number: 2 (lower is better)
Translates to: SNLRIINILLGMCCSGEYSVELL*VFLHSD
Trigger: ATCACTGTGCAGAAATACCCACAGAAGTTCAACTGA...ATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp TCTCAGAGAGGTACAGCCAAATTTGAACTCATCATACTTTCCCAAGTTCTCCACTTCACAGGAAGATACTaGGAGGATCTCTTTCTTACT +
Preference number: 2 (lower is better)
Translates to: SQRGTAKFELIILSQVLHFTGRY*EDLFLT
Trigger: AGTAAGAAAGAGATCCTCCCAGTATCTTCCTGTGAA...GTGGAGAACTTGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTCTCTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp TCATTGATTCCACACGGTACTGTGAACCCCTTGTCAGTACATGTAAAAACTGAATTAGGGGTATATGCTTaGTCCAGCTTTGATTCTAGG +
Preference number: 2 (lower is better)
Translates to: SLIPHGTVNPLSVHVKTELGVYA*SSFDSR
Trigger: CCTAGAATCAAAGCTGGACCAAGCATATACCCCTAA...TTCAGTTTTTACATGTACTGACAAGGGGTTCACAGTACCGTGTGGAATCAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGGGTATTTCTGCACAGTaGTCTCTTTTTGGCACAATG +
Preference number: 2 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQGISAQ*SLFGTM
Trigger: CATTGTGCCAAAAAGAGATCACTGTGCAGAAATACC...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp TATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTTGACTTCTGTATTCTCGTTAGGGTaGCGGTGCATATGTATAAAA +
Preference number: 2 (lower is better)
Translates to: YFSTGCGDDSHCYLWLTSVFSLG*RCICIK
Trigger: TTTTATACATATGCACCGTCACCCTAACGAGAATAC...AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCTTGTAAGCCTTCATTaGCTGCTTCACCATAAATCT +
Preference number: 2 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLVSLH*LLHHKS
Trigger: AGATTTATGGTGAAGCAGTCAATGAAGGCTTACAAG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATATTACTTTTCCTTCTTaGTTTTCGGAACTTGACAGC +
Preference number: 2 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHITFPS*FSELDS
Trigger: GCTGTCAAGTTCCGAAAAGCAAGAAGGAAAAGTAAT...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTGACAGAACCTCAGAGTaGAATGTTAACTCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFDRTSE*NVNSAE
Trigger: CTCTGCTGAGTTAACATTGCACTCTGAGGTTCTGTC...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp TATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTTGACTTCTAATGTTCTTCAATATTaGTGTCCCATCTCTGGGACA +
Preference number: 2 (lower is better)
Translates to: YFSTGCGDDSHCYLWLTSNVLQY*CPISGT
Trigger: TGTCCCAGAGATGGGACAGCAATATTGAAGAACATT...AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATAGTCTCCTGATGACCTaGAAGTTTCCTTTTATTCAA +
Preference number: 2 (lower is better)
Translates to: SNLRIINILLGMCCSGEYSLLMT*KFPFIQ
Trigger: TTGAATAAAAGGAAACTTGCAGGTCATCAGGAGACT...ATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp TTTGGCTGTGGGAGGCTAAGAAACACTTCTTTGCTTACTGAACTCCTATTCAATTATAGTCCAAAGGACTaGTCAGTTTCTAACGTTCCA +
Preference number: 2 (lower is better)
Translates to: FGCGRLRNTSLLTELLFNYSPKD*SVSNVP
Trigger: TGGAACGTTAGAAACTGAGCAGTCCTTTGGACTATA...ATTGAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAGCCTCCCACAGCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp TTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTCTCAATTTTGTCATCTaGCACCCGAGAGATCATCCG +
Preference number: 2 (lower is better)
Translates to: LSHSLYMIHTHLFQLQICLNFVI*HPRDHP
Trigger: CGGATGATCTCTCGGGTGCCAGATGACAAAATTGAG...ACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp TGTTTCTTGAAACATACAGTTCTAAATCTTCACAGGCCACGTCTACAAGTTCACTTCACTTTCTGTTGCTaGCACAAACCTGTGATCTTG +
Preference number: 2 (lower is better)
Translates to: CFLKHTVLNLHRPRLQVHFTFCC*HKPVIL
Trigger: CAAGATCACAGGTTTGTGCCAGCAACAGAAAGTGAA...GTGAACTTGTAGACGTGGCCTGTGAAGATTTAGAACTGTATGTTTCAAGAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp GGCGACGATTCTCATTGCTATCTATGGTTGACTTCTCAAAAATTTCAGGACTTAGAACTTCTACCATATTaGCTGGTGTACACTGAAGCA +
Preference number: 2 (lower is better)
Translates to: GDDSHCYLWLTSQKFQDLELLPY*LVYTEA
Trigger: TGCTTCAGTGTACACCAGCCAATATGGTAGAAGTTC...TAAGTCCTGAAATTTTTGAGAAGTCAACCATAGATAGCAATGAGAATCGTCGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATAGTGGAGAAGAATTTATaGGACTTGTGCTTCTCTCAG +
Preference number: 2 (lower is better)
Translates to: LCSCATSFSYTRINSLLIVEKNL*DLCFSQ
Trigger: CTGAGAGAAGCACAAGTCCCATAAATTCTTCTCCAC...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp AAAGTGATTGGAAATCCAAAACGAGAACAGAGTTGCTATAGAAGCGGGATTCAGACTTACATCCATTTTTaGAGGCACTACAGGTTTGTC +
Preference number: 2 (lower is better)
Translates to: KVIGNPKREQSCYRSGIQTYIHF*RHYRFV
Trigger: GACAAACCTGTAGTGCCTCCAAAAATGGATGTAAGT...CTGAATCCCGCTTCTATAGCAACTCTGTTCTCGTTTTGGATTTCCAATCACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 90 bp ATCCAGTCTGAATTGTTTGGCTGTGGGAGGCTAAGAAACACTTCTTaGCTTACTGAACTCCTATTCAATCTAGATTTTTCACTTAGACAG +
Preference number: 2 (lower is better)
Translates to: IQSELFGCGRLRNTS*LTELLFNLDFSLRQ
Trigger: CTGTCTAAGTGAAAAATCTAGATTGAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAGCCTCCCACAGCCAAACAATTCAGACTGGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATCTCATCTCTTTCAGCTaGAAATCTGTTCTCAATTTT +
Preference number: 2 (lower is better)
Translates to: SNLRIINILLGMCCSGEYLISFS*KSVLNF
Trigger: AAAATTGAGAACAGATTTGCAGCTGAAAGAGATGAG...ATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp TGTTTCTTGAAACATACAGTTCTAAATCTTCACAGGCCACGTCTACAAGTTCACAGAGGTAAGGAAAGATaGCATGTAGATGAAGACATG +
Preference number: 2 (lower is better)
Translates to: CFLKHTVLNLHRPRLQVHRGKER*HVDEDM
Trigger: CATGTCTTCATCTACATGGCATCTTTCCTTACCTCT...GTGAACTTGTAGACGTGGCCTGTGAAGATTTAGAACTGTATGTTTCAAGAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp TCTGATCAGCTGGGACAAACTGACTTCCAGAATAAAAGCTACAAAATCCAGTCTATTACTTTTCCTTCTTaGTTTTCGGAACTTGACAGC +
Preference number: 2 (lower is better)
Translates to: SDQLGQTDFQNKSYKIQSITFPS*FSELDS
Trigger: GCTGTCAAGTTCCGAAAAGCAAGAAGGAAAAGTAAT...AGACTGGATTTTGTAGCTTTTATTCTGGAAGTCAGTTTGTCCCAGCTGATCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp TCTGATCAGCTGGGACAAACTGACTTCCAGAATAAAAGCTACAAAATCCAGTCTCTTGCAGGATCCAGTTaGATGCAATGTATTACTTTT +
Preference number: 2 (lower is better)
Translates to: SDQLGQTDFQNKSYKIQSLAGSS*MQCITF
Trigger: AAAAGTAATACATTGCATGCAACTGGATCCTGCAAG...AGACTGGATTTTGTAGCTTTTATTCTGGAAGTCAGTTTGTCCCAGCTGATCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATATTCTGTGGGTATTTCTaGACAGTGATCTCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: LCSCATSFSYTRINSLLIFCGYF*TVISFW
Trigger: CCAAAAAGAGATCACTGTGCAGAAATACCCACAGAA...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGTTCTGTGGGTATTTCTaGACAGTGATCTCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQFCGYF*TVISFW
Trigger: CCAAAAAGAGATCACTGTGCAGAAATACCCACAGAA...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp TCATTGATTCCACACGGTACTGTGAACCCCTTGTCAGTACATGTAAAAACTGAAGTCTTGTGTAGTATTTaGATTTTGTGCTTTCTGCTG +
Preference number: 2 (lower is better)
Translates to: SLIPHGTVNPLSVHVKTEVLCSI*ILCFLL
Trigger: CAGCAGAAAGCACAAAATGCAAATACTACACAAGAC...TTCAGTTTTTACATGTACTGACAAGGGGTTCACAGTACCGTGTGGAATCAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGATGGTACACATACTaGAGCAAATCCAACACCTGC +
Preference number: 2 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHRWYTY*SKSNTC
Trigger: GCAGGTGTTGGATTTGCTCCAGTATGTGTACCATCT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR-3UTR CCA 90 bp GGATATTTATTATTTCCAAAGGAGCGACATGGTGATGGCATCCTATTTCTTTCCTCCATAACCATCGTATaGCACATAGAGGTAAGGAAA +
Preference number: 2 (lower is better)
Translates to: GYLLFPKERHGDGILFLSSITIV*HIEVRK
Trigger: TTTCCTTACCTCTATGTGCCATACGATGGTTATGGA...GGAAAGAAATAGGATGCCATCACCATGTCGCTCCTTTGGAAATAATAAATATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp GGCGACGATTCTCATTGCTATCTATGGTTGACTTCTCAAAAATTTCAGGACTTATTCTATAGCTTGTCCTaGAAAAAGATCCTGAACAGC +
Preference number: 2 (lower is better)
Translates to: GDDSHCYLWLTSQKFQDLFYSLS*KKILNS
Trigger: GCTGTTCAGGATCTTTTTCCAGGACAAGCTATAGAA...TAAGTCCTGAAATTTTTGAGAAGTCAACCATAGATAGCAATGAGAATCGTCGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp TCATTGATTCCACACGGTACTGTGAACCCCTTGTCAGTACATGTAAAAACTGAAAGGATTACTGCAAAATaGTTCCTGGTAAATAGTCTC +
Preference number: 2 (lower is better)
Translates to: SLIPHGTVNPLSVHVKTERITAK*FLVNSL
Trigger: GAGACTATTTACCAGGAACCATTTTGCAGTAATCCT...TTCAGTTTTTACATGTACTGACAAGGGGTTCACAGTACCGTGTGGAATCAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGAGAAGTTTCTTTCTGTaGGGTATTTACTGCTGCAAA +
Preference number: 2 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQRSFFL*GIYCCK
Trigger: TTTGCAGCAGTAAATACCCCACAGAAAGAAACTTCT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp AAAGTGATTGGAAATCCAAAACGAGAACAGAGTTGCTATAGAAGCGGGATTCAGAGAAGTTTCTTTCTGTaGGGTATTTACTGCTGCAAA +
Preference number: 2 (lower is better)
Translates to: KVIGNPKREQSCYRSGIQRSFFL*GIYCCK
Trigger: TTTGCAGCAGTAAATACCCCACAGAAAGAAACTTCT...CTGAATCCCGCTTCTATAGCAACTCTGTTCTCGTTTTGGATTTCCAATCACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTACATCCTTGACTCGATaGAAGTTAAAAAGCACCATG +
Preference number: 2 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSTSLTR*KLKSTM
Trigger: CATGGTGCTTTTTAACTTTCATCGAGTCAAGGATGT...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp TATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTTGACTTCTCTCATCTCTTTCAGCTaGAAATCTGTTCTCAATTTT +
Preference number: 2 (lower is better)
Translates to: YFSTGCGDDSHCYLWLTSLISFS*KSVLNF
Trigger: AAAATTGAGAACAGATTTGCAGCTGAAAGAGATGAG...AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACACATCCTTGACTCGATaGAAGTTAAAAAGCACCATG +
Preference number: 2 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHTSLTR*KLKSTM
Trigger: CATGGTGCTTTTTAACTTTCATCGAGTCAAGGATGT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGACATCCTTGACTCGATaGAAGTTAAAAAGCACCATG +
Preference number: 2 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWTSLTR*KLKSTM
Trigger: CATGGTGCTTTTTAACTTTCATCGAGTCAAGGATGT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGTACATTGTAAGAAGTaGGCTATTCAGAGATCAACA +
Preference number: 2 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTVHCKK*AIQRST
Trigger: TGTTGATCTCTGAATAGCTCACTTCTTACAATGTAC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR-3UTR GCA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATATTATTTTTAAAGTATTaGAACAGGCCCACAGGTTTG +
Preference number: 2 (lower is better)
Translates to: LCSCATSFSYTRINSLLILFLKY*NRPTGL
Trigger: CAAACCTGTGGGCCTGTTGCAATACTTTAAAAATAA...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTATTATGGCTCCGCTTTaGAAAAGTTCACATATCCTT +
Preference number: 2 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFIMAPL*KSSHIL
Trigger: AAGGATATGTGAACTTTTGCAAAGCGGAGCCATAAT...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTCAGGATCCAGTTGCATaGAATGTATTACTTTTCCTT +
Preference number: 2 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFQDPVA*NVLLFL
Trigger: AAGGAAAAGTAATACATTGCATGCAACTGGATCCTG...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR GCA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTCTGAATGAACAGTACTaGTTAAAGATCCAGGGTATT +
Preference number: 2 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFLNEQY*LKIQGI
Trigger: AATACCCTGGATCTTTAAGCAGTACTGTTCATTCAG...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACTCAAAATGCTACACGTaGTACTACTGTTTGCACAGT +
Preference number: 2 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHSKCYT*YYCLHS
Trigger: ACTGTGCAAACAGTAGTACCACGTGTAGCATTTTGA...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR-3UTR CCA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTTCAGTTGAACTTCTGTaGGTATTTCTGCACAGTGAT +
Preference number: 2 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISSVELL*VFLHSD
Trigger: ATCACTGTGCAGAAATACCCACAGAAGTTCAACTGA...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CCA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTCAATTATTAGGCATTTaGCTTTCCTCTGAAGCTGTA +
Preference number: 2 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFQLLGI*LSSEAV
Trigger: TACAGCTTCAGAGGAAAGCCAAATGCCTAATAATTG...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCCTCACTCATTGTATATaGTCCATACTCATCTCTTTC +
Preference number: 2 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSLTHCI*SILISF
Trigger: GAAAGAGATGAGTATGGATCATATACAATGAGTGAG...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 72 bp AAGTGGTACTCCGGGGGTCCCATAAATGATGACGTATaGCACTCGCTCCCCAACCTGAGGCTCAGAGCGCCG +
Preference number: 3 (lower is better)
Translates to: KWYSGGPINDDV*HSLPNLRLRAP
Trigger: CGGCGCTCTGAGCCTCAGGTTGGGGAGCGAGTGCCATACGTCATCATTTATGGGACCCCCGGAGTACCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 72 bp ATTCAGTCTCAGAGTTGGGTCCTGCAGGACTTCCACTaGGCGCCTTACAAGCTGGATAAGTGGTACTCCGGG +
Preference number: 3 (lower is better)
Translates to: IQSQSWVLQDFH*APYKLDKWYSG
Trigger: CCCGGAGTACCACTTATCCAGCTTGTAAGGCGCCCAGTGGAAGTCCTGCAGGACCCAACTCTGAGACTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 72 bp CAGGACTTCCACTGGGCGCCTTACAAGCTGGATAAGTaGTACTCCGGGGGTCCCATAAATGATGACGTATGG +
Preference number: 3 (lower is better)
Translates to: QDFHWAPYKLDK*YSGGPINDDVW
Trigger: CCATACGTCATCATTTATGGGACCCCCGGAGTACCACTTATCCAGCTTGTAAGGCGCCCAGTGGAAGTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTCTTTTTCGGGATCACTaGCAGAGGCAACTGGTGGCA +
Preference number: 3 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGLFRDH*QRQLVA
Trigger: TGCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAG...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 72 bp ACTCAGCCAGATCATTTGCAAGTCGAGTTTCTACCATaGGGAGCCGTCCACCAATCTCCCTGGGCTTTTCTG +
Preference number: 3 (lower is better)
Translates to: TQPDHLQVEFLP*GAVHQSPWAFL
Trigger: CAGAAAAGCCCAGGGAGATTGGTGGACGGCTCCTCATGGTAGAAACTCGACTTGCAAATGATCTGGCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 72 bp CTCTTTTTCTGCAGCAGCCATGATTTCTTCAGCTCTTaGATCTGTGGGAGACCAGCAGCGAGGTGGAGAAGA +
Preference number: 3 (lower is better)
Translates to: LFFCSSHDFFSS*ICGRPAARWRR
Trigger: TCTTCTCCACCTCGCTGCTGGTCTCCCACAGATCCAAGAGCTGAAGAAATCATGGCTGCTGCAGAAAAAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TTTGCAAGTCGAGTTTCTACCATGAGGAGCCGTCCACCAATCTCCCTGGGCTTTGGGAAGAAAGGGCACTaGTGTGTTTACACTGAAAGG +
Preference number: 3 (lower is better)
Translates to: FASRVSTMRSRPPISLGFGKKGH*CVYTER
Trigger: CCTTTCAGTGTAAACACACAAGTGCCCTTTCTTCCC...AAAGCCCAGGGAGATTGGTGGACGGCTCCTCATGGTAGAAACTCGACTTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 72 bp CAAGGAAAAGTCTCCCTCAAACTCAGCCAGATCATTTaGAAGTCGAGTTTCTACCATGAGGAGCCGTCCACC +
Preference number: 3 (lower is better)
Translates to: QGKVSLKLSQII*KSSFYHEEPST
Trigger: GGTGGACGGCTCCTCATGGTAGAAACTCGACTTGCAAATGATCTGGCTGAGTTTGAGGGAGACTTTTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTTGGCGACGATTCTCATaGCTATCTATGGTTGACTTC +
Preference number: 3 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGWRRFS*LSMVDF
Trigger: GAAGTCAACCATAGATAGCAATGAGAATCGTCGCCA...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTACAACTCCAGTTGGCTaGGTTTTAGGCAGTTTCTTG +
Preference number: 3 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGTTPVG*VLGSFL
Trigger: CAAGAAACTGCCTAAAACCAAGCCAACTGGAGTTGT...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 72 bp CCAAATGTGACATTTGCTATCAGCTTAAGTCCCAACTaGCGCGCATCAAGCATTCGTGACAGGGCTCTGTCT +
Preference number: 3 (lower is better)
Translates to: PNVTFAISLSPN*RASSIRDRALS
Trigger: AGACAGAGCCCTGTCACGAATGCTTGATGCGCGTCAGTTGGGACTTAAGCTGATAGCAAATGTCACATTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 72 bp CAACATGCTGAGGTTGGCTCCGACATTTACTACAGATaGCATGCTGAGTTAGGTCATCACACACAGGACAGT +
Preference number: 3 (lower is better)
Translates to: QHAEVGSDIYYR*HAELGHHTQDS
Trigger: ACTGTCCTGTGTGTGATGACCTAACTCAGCATGGCATCTGTAGTAAATGTCGGAGCCAACCTCAGCATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 72 bp ACGTTCCAACTCCCGGATTTCTTGGTTGAGGATGACTaGAACATGCTGAGGTTGGCTCCGACATTTACTACA +
Preference number: 3 (lower is better)
Translates to: TFQLPDFLVEDD*NMLRLAPTFTT
Trigger: TGTAGTAAATGTCGGAGCCAACCTCAGCATGTTGCAGTCATCCTCAACCAAGAAATCCGGGAGTTGGAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 72 bp CTTGGTAATATAGTAAGTAGCATTCAGTCTCAGAGTTaGGTCCTGCAGGACTTCCACTGGGCGCCTTACAAG +
Preference number: 3 (lower is better)
Translates to: LGNIVSSIQSQS*VLQDFHWAPYK
Trigger: CTTGTAAGGCGCCCAGTGGAAGTCCTGCAGGACCCAACTCTGAGACTGAATGCTACTTACTATATTACCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTAAAGCCCCTTTGCTTTaGCTCCCATGCTATTTGTTT +
Preference number: 3 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGKAPLL*LPCYLF
Trigger: AAACAAATAGCATGGGAGCAAAAGCAAAGGGGCTTT...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATGAACCAGTTGTCGACTaGGGGCACATTTGCAAGGCA +
Preference number: 3 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHEPVVD*GHICKA
Trigger: TGCCTTGCAAATGTGCCCCAAGTCGACAACTGGTTC...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATGGCTTGAAGCCACACTaGAACCAGTTGTCGACTTGG +
Preference number: 3 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHGLKPH*NQLSTW
Trigger: CCAAGTCGACAACTGGTTCAAGTGTGGCTTCAAGCC...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 72 bp AGCTGTATTTCCCGGAGAACAAGTTTCACTGTGCTTTaGCTGTTCCGCTATGCACACAATCTGCTGCTGACT +
Preference number: 3 (lower is better)
Translates to: SCISRRTSFTVL*LFRYAHNLLLT
Trigger: AGTCAGCAGCAGATTGTGTGCATAGCGGAACAGTCAAAGCACAGTGAAACTTGTTCTCCGGGAAATACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 72 bp TCTGAAGCTGTATTTCCCGGAGAACAAGTTTCACTGTaGTTTGACTGTTCCGCTATGCACACAATCTGCTGC +
Preference number: 3 (lower is better)
Translates to: SEAVFPGEQVSL*FDCSAMHTICC
Trigger: GCAGCAGATTGTGTGCATAGCGGAACAGTCAAAGCACAGTGAAACTTGTTCTCCGGGAAATACAGCTTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp CTATTTACTCGGGAGAGTTTGAAAAGTACTGGGCAGTTCAGAGAAACACATGGGAGGGTTTCCACCAATTaGAGCTTCAATGTCCAGACG +
Preference number: 3 (lower is better)
Translates to: LFTRESLKSTGQFRETHGRVSTN*SFNVQT
Trigger: CGTCTGGACATTGAAGCTCAAATTGGTGGAAACCCT...CCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp CCAATGAAGGCAGCTCCTCTACTGGTGATGAGGGTCTATCATCTCCATTTAATGCAATGTTCTTCAATATaGCTGTCCCATCTCTGGGAC +
Preference number: 3 (lower is better)
Translates to: PMKAAPLLVMRVYHLHLMQCSSI*LSHLWD
Trigger: GTCCCAGAGATGGGACAGCAATATTGAAGAACATTG...CATTAAATGGAGATGATAGACCCTCATCACCAGTAGAGGAGCTGCCTTCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTTGACTTCTGAGTTCGAGGTTTTCTaGGGGACGTTACCGATCGTG +
Preference number: 3 (lower is better)
Translates to: YFSTGCGDDSHCYLWLTSEFEVF*GTLPIV
Trigger: CACGATCGGTAACGTCCCCAAGAAAACCTCGAACTC...AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACCTATTTTTCCACTGGTaGTGGCGACGATTCTCATTG +
Preference number: 3 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHLFFHW*WRRFSL
Trigger: CAATGAGAATCGTCGCCACAACCAGTGGAAAAATAG...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TCTCAGAGAGGTACAGCCAAATTTGAACTCATCATACTTTCCCAAGTTCTCCACCCACACTTGAACCAGTaGTCGACTTGGGGCACATTT +
Preference number: 3 (lower is better)
Translates to: SQRGTAKFELIILSQVLHPHLNQ*STWGTF
Trigger: AAATGTGCCCCAAGTCGACAACTGGTTCAAGTGTGG...GTGGAGAACTTGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTCTCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 72 bp GAGAACAAGTTTCACTGTGCTTTGACTGTTCCGCTATaGACACAATCTGCTGCTGACTGTCTTTGCAATGCA +
Preference number: 3 (lower is better)
Translates to: ENKFHCALTVPL*TQSAADCLCNA
Trigger: TGCATTGCAAAGACAGTCAGCAGCAGATTGTGTGCATAGCGGAACAGTCAAAGCACAGTGAAACTTGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 72 bp GTCGATACTGAATGCCATCTGAGAAAGATAGCTTTCTaGCTGCTGTCCATAACCATCGTATGGCACATAGAG +
Preference number: 3 (lower is better)
Translates to: VDTECHLRKIAF*LLSITIVWHIE
Trigger: CTCTATGTGCCATACGATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCTCAGATGGCATTCAGTATCGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 72 bp CTGGTGATGAGGGTCTATCATCTCCATTTAATGCTTTaGAATCTGGGGATATTGGTTGTTGCCAAGGGGGAA +
Preference number: 3 (lower is better)
Translates to: LVMRVYHLHLML*NLGILVVAKGE
Trigger: TTCCCCCTTGGCAACAACCAATATCCCCAGATTCCAAAGCATTAAATGGAGATGATAGACCCTCATCACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp GACATAAGTGGTTTCAGAATGTTAGCAGTTCGAGGGGTGAAGCTGCCATTTTTAAAATGGGATATTTGGTaGCAGGGGAGTCGGGAACTT +
Preference number: 3 (lower is better)
Translates to: DISGFRMLAVRGVKLPFLKWDIW*QGSREL
Trigger: AAGTTCCCGACTCCCCTGCAACCAAATATCCCATTT...TAAAAATGGCAGCTTCACCCCTCGAACTGCTAACATTCTGAAACCACTTATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACCTTTGGTTTGTGAAATaGCTTCTGATAACGACCTCG +
Preference number: 3 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHLWFVK*LLITTS
Trigger: CGAGGTCGTTATCAGAAGCAATTTCACAAACCAAAG...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TCTCAGAGAGGTACAGCCAAATTTGAACTCATCATACTTTCCCAAGTTCTCCACGACTACATCCCGTGGTaGGTGCTTGTAAAGCAATCT +
Preference number: 3 (lower is better)
Translates to: SQRGTAKFELIILSQVLHDYIPW*VLVKQS
Trigger: AGATTGCTTTACAAGCACCAACCACGGGATGTAGTC...GTGGAGAACTTGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTCTCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TTAAAAGACTGCTCCTTAGTGGCTCCTTTCAGTAGCACAAACATACTGTCAGTATGGGGATATTGGTTGTaGCCAAGGGGGAATTACTGG +
Preference number: 3 (lower is better)
Translates to: LKDCSLVAPFSSTNILSVWGYWL*PRGNYW
Trigger: CCAGTAATTCCCCCTTGGCAACAACCAATATCCCCA...TACTGACAGTATGTTTGTGCTACTGAAAGGAGCCACTAAGGAGCAGTCTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp CTATTTACTCGGGAGAGTTTGAAAAGTACTGGGCAGTTCAGAGAAACACATGGGCAATACGCAACATCATaGATTCCACACGGTACTGTG +
Preference number: 3 (lower is better)
Translates to: LFTRESLKSTGQFRETHGQYATS*IPHGTV
Trigger: CACAGTACCGTGTGGAATCAATGATGTTGCGTATTG...CCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 72 bp TCCCATTTCTTTTCTGGTGTGACCTTGAATCCAGTCTaGATTGTTTGGCTGTGGGAGGCTAAGAAACACTTC +
Preference number: 3 (lower is better)
Translates to: SHFFSGVTLNPV*IVWLWEAKKHF
Trigger: GAAGTGTTTCTTAGCCTCCCACAGCCAAACAATTCAGACTGGATTCAAGGTCACACCAGAAAAGAAATGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 72 bp TTAGGATTGGTAGCAGTTACAGCTTCGGCAATTTCCTaGCCAATCTTAAAAGACTGCTCCTTAGTGGCTCCT +
Preference number: 3 (lower is better)
Translates to: LGLVAVTASAIS*PILKDCSLVAP
Trigger: AGGAGCCACTAAGGAGCAGTCTTTTAAGATTGGTCAGGAAATTGCCGAAGCTGTAACTGCTACCAATCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 72 bp GTACAGTTCTTGCATATCTTTACAAGTTGCTCCTGTTaGCGTTCCAACTCCCGGATTTCTTGGTTGAGGATG +
Preference number: 3 (lower is better)
Translates to: VQFLHIFTSCSC*RSNSRISWLRM
Trigger: CATCCTCAACCAAGAAATCCGGGAGTTGGAACGTCAACAGGAGCAACTTGTAAAGATATGCAAGAACTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 72 bp GTGCCTTGGACAATTCTCTATTTACTCGGGAGAGTTTaGAAAGTACTGGGCAGTTCAGAGAAACACATGGGA +
Preference number: 3 (lower is better)
Translates to: VPWTILYLLGRV*KVLGSSEKHMG
Trigger: TCCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAGAGAATTGTCCAAGGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 72 bp GTTATCATCATCATCTTCATCTTTTTCGGGATCACTTaGAGAGGCAACTGGTGGCAGCATCTGACTTTCACT +
Preference number: 3 (lower is better)
Translates to: VIIIIFIFFGIT*RGNWWQHLTFT
Trigger: AGTGAAAGTCAGATGCTGCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 72 bp TCAGGATCCGGTTCTAAGTCTCGTCTAGTTCGAGCATaGAACTCCACACTGATTAGGGTAAGATTTTGTATC +
Preference number: 3 (lower is better)
Translates to: SGSGSKSRLVRA*NSTLIRVRFCI
Trigger: GATACAAAATCTTACCCTAATCAGTGTGGAGTTGCATGCTCGAACTAGACGAGACTTAGAACCGGATCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 72 bp ATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATACATaGACTTACATCCATTTTTGGAGGCACTACAGGTTT +
Preference number: 3 (lower is better)
Translates to: ILLGMCCSGEYT*TYIHFWRHYRF
Trigger: AAACCTGTAGTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACCAAGGAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp CCCTTAAAAAGCATTGCCTCTTTTTCTGCAGCAGCCATGATTTCTTCAGCTCTTAATCTGTTCTCAATTTaGTCATCTGGCACCCGAGAG +
Preference number: 3 (lower is better)
Translates to: PLKSIASFSAAAMISSALNLFSI*SSGTRE
Trigger: CTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT...AAGAGCTGAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATGCTTTTTAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TTATCATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTGGCCATTATGGCTCCGCTTaGCAAAAGTTCACATATCCT +
Preference number: 3 (lower is better)
Translates to: LSSSSSSFSGSLAEATGGHYGSA*QKFTYP
Trigger: AGGATATGTGAACTTTTGCAAAGCGGAGCCATAATG...GCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCTTGCTTTTCGGAACTaGACAGCAGCCAGATTTATT +
Preference number: 3 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCLAFRN*TAARFI
Trigger: AATAAATCTGGCTGCTGTCAAGTTCCGAAAAGCAAG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TCTGATCAGCTGGGACAAACTGACTTCCAGAATAAAAGCTACAAAATCCAGTCTAGGGTTTCCACCAATTaGAGCTTCAATGTCCAGACG +
Preference number: 3 (lower is better)
Translates to: SDQLGQTDFQNKSYKIQSRVSTN*SFNVQT
Trigger: CGTCTGGACATTGAAGCTCAAATTGGTGGAAACCCT...AGACTGGATTTTGTAGCTTTTATTCTGGAAGTCAGTTTGTCCCAGCTGATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTTGACTTCTGGGAAGAAAGGGCACTaGTGTGTTTACACTGAAAGG +
Preference number: 3 (lower is better)
Translates to: YFSTGCGDDSHCYLWLTSGKKGH*CVYTER
Trigger: CCTTTCAGTGTAAACACACAAGTGCCCTTTCTTCCC...AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TTAGGCATTTGGCTTTCCTCTGAAGCTGTATTTCCCGGAGAACAAGTTTCACTGAGCCTCCAGAACTACTaGCAAATTCAGACACATTCT +
Preference number: 3 (lower is better)
Translates to: LGIWLSSEAVFPGEQVSLSLQNY*QIQTHS
Trigger: AGAATGTGTCTGAATTTGCAAGTAGTTCTGGAGGCT...CAGTGAAACTTGTTCTCCGGGAAATACAGCTTCAGAGGAAAGCCAAATGCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TCATTGATTCCACACGGTACTGTGAACCCCTTGTCAGTACATGTAAAAACTGAAGACTACATCCCGTGGTaGGTGCTTGTAAAGCAATCT +
Preference number: 3 (lower is better)
Translates to: SLIPHGTVNPLSVHVKTEDYIPW*VLVKQS
Trigger: AGATTGCTTTACAAGCACCAACCACGGGATGTAGTC...TTCAGTTTTTACATGTACTGACAAGGGGTTCACAGTACCGTGTGGAATCAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 72 bp GGCATTCCTGATACTAATGACACTTTGAACACATGCTaGGCAGTGGAAGATGGATTGCCTAAAGCCACATTA +
Preference number: 3 (lower is better)
Translates to: GIPDTNDTLNTC*AVEDGLPKATL
Trigger: TAATGTGGCTTTAGGCAATCCATCTTCCACTGCTCAGCATGTGTTCAAAGTGTCATTAGTATCAGGAATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 72 bp AGTTTAATAGCTCGTTCCAAGGTCTCTCTGGCTTTGTaGACAATACTATCGCCAACCTCAATGCATGGCATT +
Preference number: 3 (lower is better)
Translates to: SLIARSKVSLAL*TILSPTSMHGI
Trigger: AATGCCATGCATTGAGGTTGGCGATAGTATTGTTCACAAAGCCAGAGAGACCTTGGAACGAGCTATTAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 72 bp TATTGGCTGAGTCAAGAGACTGTCCCATTTCTTTTCTaGTGTGACCTTGAATCCAGTCTGAATTGTTTGGCT +
Preference number: 3 (lower is better)
Translates to: YWLSQETVPFLF*CDLESSLNCLA
Trigger: AGCCAAACAATTCAGACTGGATTCAAGGTCACACCAGAAAAGAAATGGGACAGTCTCTTGACTCAGCCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TTAGGCATTTGGCTTTCCTCTGAAGCTGTATTTCCCGGAGAACAAGTTTCACTGTCTTGCAGGATCCAGTaGCATGCAATGTATTACTTT +
Preference number: 3 (lower is better)
Translates to: LGIWLSSEAVFPGEQVSLSCRIQ*HAMYYF
Trigger: AAAGTAATACATTGCATGCAACTGGATCCTGCAAGA...CAGTGAAACTTGTTCTCCGGGAAATACAGCTTCAGAGGAAAGCCAAATGCCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TTAGGCATTTGGCTTTCCTCTGAAGCTGTATTTCCCGGAGAACAAGTTTCACTGCTTCGTTTTCGGGATTaGAGAGTTCCATCTAAACTT +
Preference number: 3 (lower is better)
Translates to: LGIWLSSEAVFPGEQVSLLRFRD*RVPSKL
Trigger: AAGTTTAGATGGAACTCTCAAATCCCGAAAACGAAG...CAGTGAAACTTGTTCTCCGGGAAATACAGCTTCAGAGGAAAGCCAAATGCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TTAAAAGACTGCTCCTTAGTGGCTCCTTTCAGTAGCACAAACATACTGTCAGTATTACTTGACCCTTTATaGACAACTCCTTGGCCACTG +
Preference number: 3 (lower is better)
Translates to: LKDCSLVAPFSSTNILSVLLDPL*TTPWPL
Trigger: CAGTGGCCAAGGAGTTGTCAATAAAGGGTCAAGTAA...TACTGACAGTATGTTTGTGCTACTGAAAGGAGCCACTAAGGAGCAGTCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TTAAAAGACTGCTCCTTAGTGGCTCCTTTCAGTAGCACAAACATACTGTCAGTACGACTTGGGGCACATTaGCAAGGCATAATCACAATT +
Preference number: 3 (lower is better)
Translates to: LKDCSLVAPFSSTNILSVRLGAH*QGIITI
Trigger: AATTGTGATTATGCCTTGCAAATGTGCCCCAAGTCG...TACTGACAGTATGTTTGTGCTACTGAAAGGAGCCACTAAGGAGCAGTCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp CTATTTACTCGGGAGAGTTTGAAAAGTACTGGGCAGTTCAGAGAAACACATGGGCAAGGGTGGAAGGATTaGCTTGGTAATATAGTAAGT +
Preference number: 3 (lower is better)
Translates to: LFTRESLKSTGQFRETHGQGWKD*LGNIVS
Trigger: ACTTACTATATTACCAAGCAAATCCTTCCACCCTTG...CCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 72 bp TGTAGCAGCATCTTTGTGAAAGATGGAGGGTTTAACTaGAAGCTTGCTTGTTGCAATTACAGAAGAGTGGGT +
Preference number: 3 (lower is better)
Translates to: CSSIFVKDGGFN*KLACCNYRRVG
Trigger: ACCCACTCTTCTGTAATTGCAACAAGCAAGCTTTCAGTTAAACCCTCCATCTTTCACAAAGATGCTGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 72 bp GAATCCATTATTGAGTTAGACCGAGTTGTTAGAGGATaGAAGCTATTTTTCCACTGGTTGTGGCGACGATTC +
Preference number: 3 (lower is better)
Translates to: ESIIELDRVVRG*KLFFHWLWRRF
Trigger: GAATCGTCGCCACAACCAGTGGAAAAATAGCTTTCATCCTCTAACAACTCGGTCTAACTCAATAATGGATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 72 bp TTTTGGAGGCACTACAGGTTTGTCATCTGGGTTAACTaGAGAGCTAAAGTTCTCAGCAGATTTTACAACTCC +
Preference number: 3 (lower is better)
Translates to: FWRHYRFVIWVN*RAKVLSRFYNS
Trigger: GGAGTTGTAAAATCTGCTGAGAACTTTAGCTCTTCAGTTAACCCAGATGACAAACCTGTAGTGCCTCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 72 bp TTTAGTCCACTTTCATCAGCAGTGCTATTAAGAGAATaGACCATAGTTCTATTCTCCCCTGAGCATGACAGT +
Preference number: 3 (lower is better)
Translates to: FSPLSSAVLLRE*TIVLFSPEHDS
Trigger: ACTGTCATGCTCAGGGGAGAATAGAACTATGGTGCATTCTCTTAATAGCACTGCTGATGAAAGTGGACTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 72 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTaGTGTAGTGGGGAGTATACATGGACTTACATCCAT +
Preference number: 3 (lower is better)
Translates to: SNLRIINILLGM*CSGEYTWTYIH
Trigger: ATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 72 bp TGCTTGACTCTTTGTCTTTGTGAACTTCTACCATATTaGCTGGTGTACACTGAAGCATTTCAGGAGACAGAA +
Preference number: 3 (lower is better)
Translates to: CLTLCLCELLPY*LVYTEAFQETE
Trigger: TTCTGTCTCCTGAAATGCTTCAGTGTACACCAGCCAATATGGTAGAAGTTCACAAAGACAAAGAGTCAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 72 bp AGAGCTAAAGTTCTCAGCAGATTTTACAACTCCAGTTaGCTTGGTTTTAGGCAGTTTCTTGGAACGTTCGTA +
Preference number: 3 (lower is better)
Translates to: RAKVLSRFYNSS*LGFRQFLGTFV
Trigger: TACGAACGTTCCAAGAAACTGCCTAAAACCAAGCCAACTGGAGTTGTAAAATCTGCTGAGAACTTTAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 72 bp GCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTaGTTGGTGCTTGTAAAGCAATCTGAGAATTATCAA +
Preference number: 3 (lower is better)
Translates to: ASDFHLQFDYIP*LVLVKQSENYQ
Trigger: TTGATAATTCTCAGATTGCTTTACAAGCACCAACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 72 bp GTCATAAGTCAGCATTTTCCTTGTAAGTTCAAGGGCTaGCACACAAGCTCCTGGTTTATAAGAAAAACTTCC +
Preference number: 3 (lower is better)
Translates to: VISQHFPCKFKG*HTSSWFIRKTS
Trigger: GGAAGTTTTTCTTATAAACCAGGAGCTTGTGTGCCAGCCCTTGAACTTACAAGGAAAATGCTGACTTATGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGCAATGTTCTTCAATATaGCTGTCCCATCTCTGGGAC +
Preference number: 3 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQQCSSI*LSHLWD
Trigger: GTCCCAGAGATGGGACAGCAATATTGAAGAACATTG...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATTGTGAGTTACAAAACTaGACTCACTGTCTTCAGTCT +
Preference number: 3 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHCELQN*THCLQS
Trigger: AGACTGAAGACAGTGAGTCAAGTTTTGTAACTCACA...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TTATCATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTGGCAAGAATTTATGGGACTaGTGCTTCTCTCAGAAAGAA +
Preference number: 3 (lower is better)
Translates to: LSSSSSSFSGSLAEATGGKNLWD*CFSQKE
Trigger: TTCTTTCTGAGAGAAGCACAAGTCCCATAAATTCTT...GCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATTTGCTCCCATGCTATTaGTTTGATTGGACTTCTCAA +
Preference number: 3 (lower is better)
Translates to: SNLRIINILLGMCCSGEYLLPCY*FDWTSQ
Trigger: TTGAGAAGTCCAATCAAACAAATAGCATGGGAGCAA...ATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp AAAGTGATTGGAAATCCAAAACGAGAACAGAGTTGCTATAGAAGCGGGATTCAGGTCCGTTTATTTGCTTaGTTATGCTCAAGGGAACCA +
Preference number: 3 (lower is better)
Translates to: KVIGNPKREQSCYRSGIQVRLFA*LCSREP
Trigger: TGGTTCCCTTGAGCATAACAAAGCAAATAAACGGAC...CTGAATCCCGCTTCTATAGCAACTCTGTTCTCGTTTTGGATTTCCAATCACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TCATTGATTCCACACGGTACTGTGAACCCCTTGTCAGTACATGTAAAAACTGAAATCGTGTCCGTTTATTaGCTTTGTTATGCTCAAGGG +
Preference number: 3 (lower is better)
Translates to: SLIPHGTVNPLSVHVKTEIVSVY*LCYAQG
Trigger: CCCTTGAGCATAACAAAGCAAATAAACGGACACGAT...TTCAGTTTTTACATGTACTGACAAGGGGTTCACAGTACCGTGTGGAATCAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGACTTACATCCATTTTaGGAGGCACTACAGGTTTGT +
Preference number: 3 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQDLHPF*EALQVC
Trigger: ACAAACCTGTAGTGCCTCCAAAAATGGATGTAAGTC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGTAACAAAAATGTCTTaGCACAGTTCCTCACAATGC +
Preference number: 3 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQVTKMS*HSSSQC
Trigger: GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTAC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR-3UTR CAA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTAATCTGTTCTCAATTTaGTCATCTGGCACCCGAGAG +
Preference number: 3 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFNLFSI*SSGTRE
Trigger: CTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATAACCGGGATGGTTTATaGCCAGGTTGTAATTTATAT +
Preference number: 3 (lower is better)
Translates to: SNLRIINILLGMCCSGEYNRDGL*PGCNLY
Trigger: ATATAAATTACAACCTGGCAATAAACCATCCCGGTT...ATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTAAGTTTCACTGTGCTTaGACTGTTCCGCTATGCACA +
Preference number: 3 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFKFHCA*TVPLCT
Trigger: TGTGCATAGCGGAACAGTCAAAGCACAGTGAAACTT...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATCTAAGAAACACTTCTTaGCTTACTGAACTCCTATTC +
Preference number: 3 (lower is better)
Translates to: SNLRIINILLGMCCSGEYLRNTS*LTELLF
Trigger: GAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAG...ATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATTCTCATGTAAAGCTTTaGCCTCCTGTAAGTTTTGTA +
Preference number: 3 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHSHVKL*PPVSFV
Trigger: TACAAAACTTACAGGAGGCAAAAGCTTTACATGAGA...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 72 bp TTCATGATACCAGCTGAAGACATCAATACCAATAAGTaGGAAGATTCTTGCCAAGGGTGGAAGGATTTGCTT +
Preference number: 3 (lower is better)
Translates to: FMIPAEDINTNK*EDSCQGWKDLL
Trigger: AAGCAAATCCTTCCACCCTTGGCAAGAATCTTCTCACTTATTGGTATTGATGTCTTCAGCTGGTATCATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 72 bp AGCTATTTTTCCACTGGTTGTGGCGACGATTCTCATTaGTATCTATGGTTGACTTCTCAAAAATTTCAGGAC +
Preference number: 3 (lower is better)
Translates to: SYFSTGCGDDSH*YLWLTSQKFQD
Trigger: GTCCTGAAATTTTTGAGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 72 bp AGAAAAATTAGCAGATGTATAGCCAAATGTGACATTTaGTATCAGCTTAAGTCCCAACTGACGCGCATCAAG +
Preference number: 3 (lower is better)
Translates to: RKISRCIAKCDI*YQLKSQLTRIK
Trigger: CTTGATGCGCGTCAGTTGGGACTTAAGCTGATAGCAAATGTCACATTTGGCTATACATCTGCTAATTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 72 bp TACAAACAACTGATGGATGCAAATCATCTCGTGAACTaGGGAATGTCTGCAAATCTACAGACTTCTTGCTTT +
Preference number: 3 (lower is better)
Translates to: YKQLMDANHLVN*GMSANLQTSCF
Trigger: AAAGCAAGAAGTCTGTAGATTTGCAGACATTCCCCAGTTCACGAGATGATTTGCATCCATCAGTTGTTTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 72 bp TCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATaGTTGACTTCTCAAAAATTTCAGGACTTAAAGTAC +
Preference number: 3 (lower is better)
Translates to: STGCGDDSHCYL*LTSQKFQDLKY
Trigger: GTACTTTAAGTCCTGAAATTTTTGAGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TTTGGCTGTGGGAGGCTAAGAAACACTTCTTTGCTTACTGAACTCCTATTCAATACGTGGTACTACTGTTaGCACAGTTTGATCAAAATA +
Preference number: 3 (lower is better)
Translates to: FGCGRLRNTSLLTELLFNTWYYC*HSLIKI
Trigger: TATTTTGATCAAACTGTGCAAACAGTAGTACCACGT...ATTGAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAGCCTCCCACAGCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTTGACTTCTCCAATATTAAAGAGCTaGGTATTTCATCTTGTTCCC +
Preference number: 3 (lower is better)
Translates to: YFSTGCGDDSHCYLWLTSPILKS*VFHLVP
Trigger: GGGAACAAGATGAAATACCAAGCTCTTTAATATTGG...AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp TTTGGCTGTGGGAGGCTAAGAAACACTTCTTTGCTTACTGAACTCCTATTCAATCCAATATTAAAGAGCTaGGTATTTCATCTTGTTCCC +
Preference number: 3 (lower is better)
Translates to: FGCGRLRNTSLLTELLFNPILKS*VFHLVP
Trigger: GGGAACAAGATGAAATACCAAGCTCTTTAATATTGG...ATTGAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAGCCTCCCACAGCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 72 bp CTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATaGATTTACAAGATGGTACACATACTGGAGCAAATC +
Preference number: 3 (lower is better)
Translates to: LLPLGSKHDLLK*IYKMVHILEQI
Trigger: GATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR TCA 72 bp GGATTGTCACTATTTTCATCTGCAGTTCCATCTAACTaGGGTATAGAAAGACTGGCTAGAAGCAAACTGTTA +
Preference number: 3 (lower is better)
Translates to: GLSLFSSAVPSN*GIERLARSKLL
Trigger: TAACAGTTTGCTTCTAGCCAGTCTTTCTATACCTCAGTTAGATGGAACTGCAGATGAAAATAGTGACAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 72 bp CCCATTAGTGGCATATCTTTCTGTTTAAAAAGTAGTTaGGAGCCTCCAGAACTACTTGCAAATTCAGACACA +
Preference number: 3 (lower is better)
Translates to: PISGISFCLKSS*EPPELLANSDT
Trigger: TGTGTCTGAATTTGCAAGTAGTTCTGGAGGCTCTCAACTACTTTTTAAACAGAAAGATATGCCACTAATGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR TCA 72 bp CTGGCCTTTCCTTCCAGAAGCTTCATACATTGTCGCTaGACATACTGTTTAATTAGACTTATATCTCTCGTT +
Preference number: 3 (lower is better)
Translates to: LAFPSRSFIHCR*TYCLIRLISLV
Trigger: AACGAGAGATATAAGTCTAATTAAACAGTATGTTCAGCGACAATGTATGAAGCTTCTGGAAGGAAAGGCCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 72 bp GGGTATATGCTTGGTCCAGCTTTGATTCTAGGGAATTaGGATATTCACTTAACTTTCCGATTGATGACAAAT +
Preference number: 3 (lower is better)
Translates to: GYMLGPALILGN*DIHLTFRLMTN
Trigger: ATTTGTCATCAATCGGAAAGTTAAGTGAATATCGCAATTCCCTAGAATCAAAGCTGGACCAAGCATATACCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR GCA 72 bp TTTTCTTGGGGACGTTACCGATCGTGTCCGTTTATTTaGTTTGTTATGCTCAAGGGAACCAGAAATATTTTT +
Preference number: 3 (lower is better)
Translates to: FSWGRYRSCPFI*FVMLKGTRNIF
Trigger: AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCGGTAACGTCCCCAAGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTAGCCTCCAGAACTACTaGCAAATTCAGACACATTCT +
Preference number: 3 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISSLQNY*QIQTHS
Trigger: AGAATGTGTCTGAATTTGCAAGTAGTTCTGGAGGCT...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTTTGCTCCCATGCTATTaGTTTGATTGGACTTCTCAA +
Preference number: 3 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFLLPCY*FDWTSQ
Trigger: TTGAGAAGTCCAATCAAACAAATAGCATGGGAGCAA...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTGGTTTAACTGAAAGCTaGCTTGTTGCAATTACAGAA +
Preference number: 3 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFGLTES*LVAITE
Trigger: TTCTGTAATTGCAACAAGCAAGCTTTCAGTTAAACC...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACACGTGGTACTACTGTTaGCACAGTTTGATCAAAATA +
Preference number: 3 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHTWYYC*HSLIKI
Trigger: TATTTTGATCAAACTGTGCAAACAGTAGTACCACGT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR TCA 72 bp GATTTATTAAATTCATGCCATAAAGATTGTAGTCAATaGAGAGCTGTAGGAGGTAGGGAATATGCGCTTCAT +
Preference number: 3 (lower is better)
Translates to: DLLNSCHKDCSQ*RAVGGREYALH
Trigger: ATGAAGCGCATATTCCCTACCTCCTACAGCTCTTCATTGACTACAATCTTTATGGCATGAATTTAATAAATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CCA 72 bp GCTTTTTCTTTAAGAGGTTTTCAGTGCTCCTTCCACTaGGAAGTAAACATGATCTACTCAAATGAATTTACA +
Preference number: 3 (lower is better)
Translates to: AFSLRGFQCSFH*EVNMIYSNEFT
Trigger: TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCTTAAAGAAAAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR TCA 72 bp CTGTTTGCACAGTTTGATCAAAATAACGATCTACTTTaGGTCAAGCAAAACCTAGAGGAAATATACCAAACA +
Preference number: 3 (lower is better)
Translates to: LFAQFDQNNDLL*VKQNLEEIYQT
Trigger: TGTTTGGTATATTTCCTCTAGGTTTTGCTTGACTCAAAGTAGATCGTTATTTTGATCAAACTGTGCAAACAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATCGTCGGTGCTGGTGCTaGCGCCACTGCCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: DISQYLKRQPFVRGNPRNRRCWC*RHCRHR
Trigger: GCGGTGGCGGCAGTGGCGGCAGCACCAGCACCGACG...ATTCCTGGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422377.5
CDS-3UTR TCA 90 bp CCAATGAAGGCAGCTCCTCTACTGGTGATGAGGGTCTATCATCTCCATTTAATGGAAAATCCGCCCGCGTaGGGAGGGAGGCGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: PMKAAPLLVMRVYHLHLMENPPA*GGRRGA
Trigger: TGCGCCTCGCCTCCCTCCTCACGCGGGCGGATTTTC...CATTAAATGGAGATGATAGACCCTCATCACCAGTAGAGGAGCTGCCTTCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422377.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCGTCGGTGCTGGTGCTaGCGCCACTGCCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQRRCWC*RHCRHR
Trigger: GCGGTGGCGGCAGTGGCGGCAGCACCAGCACCGACG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGGGCGGTGTAGGCGCTaGTGCCGCCGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEGRCRR*CRRLLR
Trigger: CCTGAGGAGGCGGCGGCAGCAGCGCCTACACCGCCC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTAGCCCCTGCAGCGGGCTaGCCATGTAGTAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RQPFVRGNPRNASESHILAPAAG*PCSSLQ
Trigger: CTGCAGACTACTACATGGCCAGCCCGCTGCAGGGGC...TAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGGCTGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TTTGCAAGTCGAGTTTCTACCATGAGGAGCCGTCCACCAATCTCCCTGGGCTTTATCACTAGAGGCTCTTaGGGCTCACTGCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: FASRVSTMRSRPPISLGFITRGS*GSLQGL
Trigger: AAGCCCCTGCAGTGAGCCTCAAGAGCCTCTAGTGAT...AAAGCCCAGGGAGATTGGTGGACGGCTCCTCATGGTAGAAACTCGACTTGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TTAGGCATTTGGCTTTCCTCTGAAGCTGTATTTCCCGGAGAACAAGTTTCACTGACTCGCTCCCCAACCTaGGGCTCAGAGCGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: LGIWLSSEAVFPGEQVSLTRSPT*GSERRS
Trigger: TGACCGGCGCTCTGAGCCTCAGGTTGGGGAGCGAGT...CAGTGAAACTTGTTCTCCGGGAAATACAGCTTCAGAGGAAAGCCAAATGCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCGTCGGTGCTGGTGCTaGCGCCACTGCCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFRRCWC*RHCRHR
Trigger: GCGGTGGCGGCAGTGGCGGCAGCACCAGCACCGACG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGGGCGGTGTAGGCGCTaGTGCCGCCGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKGRCRR*CRRLLR
Trigger: CCTGAGGAGGCGGCGGCAGCAGCGCCTACACCGCCC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTACTCAGAGTTGGGTCCTaGAGGACTTCCACTGGGCGC +
Preference number: 4 (lower is better)
Translates to: RQPFVRGNPRNASESHILLRVGS*RTSTGR
Trigger: GCGCCCAGTGGAAGTCCTGCAGGACCCAACTCTGAG...TAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGGCTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGAAAATCCGCCCGCGTaGGGAGGGAGGCGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQENPPA*GGRRGA
Trigger: TGCGCCTCGCCTCCCTCCTCACGCGGGCGGATTTTC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358835.7
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATGGTGCTGCCGCCACTaGCGCCACCGCCGGGAATCA +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEWCCRH*RHRRES
Trigger: TGATTCCCGGCGGTGGCGGCAGTGGCGGCAGCACCA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAATACTTTCGTCGGTGCTGGTaGTGCCGCCACTGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: CSQFCHLAPERSSDISQYFRRCW*CRHCRH
Trigger: GTGGCGGCAGTGGCGGCAGCACCAGCACCGACGAAA...GTATTGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422377.5
CDS-3UTR GCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCTCGAGCTTTCGTCGGTaGTGGTGCTGCCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCSSFRR*WCCRHC
Trigger: GCAGTGGCGGCAGCACCAGCACCGACGAAAGCTCGA...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAACGGTGTAGGCGCTGCTaGCGCCGCCTCCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKRCRRC*RRLLRS
Trigger: GCTCCTGAGGAGGCGGCGGCAGCAGCGCCTACACCG...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TGTTTCTTGAAACATACAGTTCTAAATCTTCACAGGCCACGTCTACAAGTTCACCGGTGTAGGCGCTGCTaGCGCCGCCTCCTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: CFLKHTVLNLHRPRLQVHRCRRC*RRLLRS
Trigger: GCTCCTGAGGAGGCGGCGGCAGCAGCGCCTACACCG...GTGAACTTGTAGACGTGGCCTGTGAAGATTTAGAACTGTATGTTTCAAGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422377.5
CDS-3UTR GCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGGGCGGTGTAGGCGCTaGTGCCGCCGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTGRCRR*CRRLLR
Trigger: CCTGAGGAGGCGGCGGCAGCAGCGCCTACACCGCCC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGACTGCCTCCCTTCACTaGCGACCCGGCAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQTASLH*RPGSGS
Trigger: GCTGCCGCTGCCGGGTCGCCAGTGAAGGGAGGCAGT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAACTGCCTCCCTTCACTaGCGACCCGGCAGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNETASLH*RPGSGS
Trigger: GCTGCCGCTGCCGGGTCGCCAGTGAAGGGAGGCAGT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTAATCACTAGAGGCTCTTaGGGCTCACTGCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: RQPFVRGNPRNASESHILITRGS*GSLQGL
Trigger: AAGCCCCTGCAGTGAGCCTCAAGAGCCTCTAGTGAT...TAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGGCTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TTTGCAAGTCGAGTTTCTACCATGAGGAGCCGTCCACCAATCTCCCTGGGCTTTACAAGTTGCTCCTGTTaGCGTTCCAACTCCCGGATT +
Preference number: 4 (lower is better)
Translates to: FASRVSTMRSRPPISLGFTSCSC*RSNSRI
Trigger: AATCCGGGAGTTGGAACGTCAACAGGAGCAACTTGT...AAAGCCCAGGGAGATTGGTGGACGGCTCCTCATGGTAGAAACTCGACTTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATGGTGCTGCCGCCACTaGCGCCACCGCCGGGAATCA +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKWCCRH*RHRRES
Trigger: TGATTCCCGGCGGTGGCGGCAGTGGCGGCAGCACCA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCGTCGGTGCTGGTGCTaGCGCCACTGCCGCCACCGC +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHRRCWC*RHCRHR
Trigger: GCGGTGGCGGCAGTGGCGGCAGCACCAGCACCGACG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTTTCGTCGGTGCTGGTaGTGCCGCCACTGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQFRRCW*CRHCRH
Trigger: GTGGCGGCAGTGGCGGCAGCACCAGCACCGACGAAA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TTTGCAAGTCGAGTTTCTACCATGAGGAGCCGTCCACCAATCTCCCTGGGCTTTTTTTTCGGGATCACTTaGAGAGGCAACTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: FASRVSTMRSRPPISLGFFFGIT*RGNWWQ
Trigger: CTGCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAA...AAAGCCCAGGGAGATTGGTGGACGGCTCCTCATGGTAGAAACTCGACTTGCAAA
51% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACGGGCGCCTTACAAGCTaGATAAGTGGTACTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHGRLTS*ISGTPG
Trigger: CCCCGGAGTACCACTTATCCAGCTTGTAAGGCGCCC...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGAAAATCCGCCCGCGTaGGGAGGGAGGCGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTENPPA*GGRRGA
Trigger: TGCGCCTCGCCTCCCTCCTCACGCGGGCGGATTTTC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358835.7
ENST00000422377.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTTGCAAGTCGAGTTTCTACCATGAGGAGCCGTCCACCAATCTCCCTGGGCTTTGTCCATGAAAACAGGTaGCTCACTCAGTCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: FASRVSTMRSRPPISLGFVHENR*LTQSLG
Trigger: ACCCAAAGACTGAGTGAGTCACCTGTTTTCATGGAC...AAAGCCCAGGGAGATTGGTGGACGGCTCCTCATGGTAGAAACTCGACTTGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACTCGCTCCCCAACCTaGGGCTCAGAGCGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFTRSPT*GSERRS
Trigger: TGACCGGCGCTCTGAGCCTCAGGTTGGGGAGCGAGT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATTTCGTCGGTGCTGGTaGTGCCGCCACTGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKFRRCW*CRHCRH
Trigger: GTGGCGGCAGTGGCGGCAGCACCAGCACCGACGAAA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCTGGGCTAAGGCCAGGTaGTTCAGGAAGCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SSDISQYLKRQPFVRGNPWAKAR*FRKPFQ
Trigger: CTGGAAAGGCTTCCTGAAGCACCTGGCCTTAGCCCA...GGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTAGCTTTCGTCGGTGCTaGTGCTGCCGCCACTGCCGC +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFSFRRC*CCRHCR
Trigger: GCGGCAGTGGCGGCAGCACCAGCACCGACGAAAGCT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGAGCTTTCGTCGGTGCTaGTGCTGCCGCCACTGCCGC +
Preference number: 4 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQSFRRC*CCRHCR
Trigger: GCGGCAGTGGCGGCAGCACCAGCACCGACGAAAGCT...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422377.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCAGCTCTTGGATCTGTaGGAGACCAGCAGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCQLLDL*ETSSEV
Trigger: CACCTCGCTGCTGGTCTCCCACAGATCCAAGAGCTG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGGGCGCCTTACAAGCTaGATAAGTGGTACTCCGGGG +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCGRLTS*ISGTPG
Trigger: CCCCGGAGTACCACTTATCCAGCTTGTAAGGCGCCC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR CAA 72 bp TTGCAGAGGCAACTGGTGGCAGCATCTGACTTTCACTaGCAGTTTGACTACATCCCGTGGTTGGTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: LQRQLVAASDFH*QFDYIPWLVLV
Trigger: TACAAGCACCAACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCCTCTGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 72 bp AAGTTGCTCCTGTTGACGTTCCAACTCCCGGATTTCTaGGTTGAGGATGACTGCAACATGCTGAGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: KLLLLTFQLPDF*VEDDCNMLRLA
Trigger: AGCCAACCTCAGCATGTTGCAGTCATCCTCAACCAAGAAATCCGGGAGTTGGAACGTCAACAGGAGCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGGGCGGGGGCAGCCGCTaGGACGGTTTTTCACAAGGT +
Preference number: 4 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQGGGSR*DGFSQG
Trigger: ACCTTGTGAAAAACCGTCTCAGCGGCTGCCCCCGCC...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000422377.5
CDS-3UTR TCA 90 bp TTAGGCATTTGGCTTTCCTCTGAAGCTGTATTTCCCGGAGAACAAGTTTCACTGATCACTAGAGGCTCTTaGGGCTCACTGCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: LGIWLSSEAVFPGEQVSLITRGS*GSLQGL
Trigger: AAGCCCCTGCAGTGAGCCTCAAGAGCCTCTAGTGAT...CAGTGAAACTTGTTCTCCGGGAAATACAGCTTCAGAGGAAAGCCAAATGCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACTGGTGCTGCCGCCACTaGCGCCACCGCCGGGAATCA +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHWCCRH*RHRRES
Trigger: TGATTCCCGGCGGTGGCGGCAGTGGCGGCAGCACCA...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACATTTCGTCGGTGCTGGTaGTGCCGCCACTGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTFRRCW*CRHCRH
Trigger: GTGGCGGCAGTGGCGGCAGCACCAGCACCGACGAAA...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATCGAGCTTTCGTCGGTaGTGGTGCTGCCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKSSFRR*WCCRHC
Trigger: GCAGTGGCGGCAGCACCAGCACCGACGAAAGCTCGA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTCGAGCTTTCGTCGGTaGTGGTGCTGCCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFSSFRR*WCCRHC
Trigger: GCAGTGGCGGCAGCACCAGCACCGACGAAAGCTCGA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCTGGGCTAAGGCCAGGTaGTTCAGGAAGCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCWAKAR*FRKPFQ
Trigger: CTGGAAAGGCTTCCTGAAGCACCTGGCCTTAGCCCA...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATTGGGCTAAGGCCAGGTaGTTCAGGAAGCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: DISQYLKRQPFVRGNPRNWAKAR*FRKPFQ
Trigger: CTGGAAAGGCTTCCTGAAGCACCTGGCCTTAGCCCA...ATTCCTGGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp CTATTTACTCGGGAGAGTTTGAAAAGTACTGGGCAGTTCAGAGAAACACATGGGTGGGCTAAGGCCAGGTaGTTCAGGAAGCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LFTRESLKSTGQFRETHGWAKAR*FRKPFQ
Trigger: CTGGAAAGGCTTCCTGAAGCACCTGGCCTTAGCCCA...CCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCTCAGAGTTGGGTCCTaGAGGACTTCCACTGGGCGC +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLRVGS*RTSTGR
Trigger: GCGCCCAGTGGAAGTCCTGCAGGACCCAACTCTGAG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAATACCAGCTCTTGGATCTGTaGGAGACCAGCAGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: CSQFCHLAPERSSDISQYQLLDL*ETSSEV
Trigger: CACCTCGCTGCTGGTCTCCCACAGATCCAAGAGCTG...GTATTGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCTGCAGGACTTCCACTaGGCGCCTTACAAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCLQDFH*APYKLD
Trigger: ATCCAGCTTGTAAGGCGCCCAGTGGAAGTCCTGCAG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTAGGCATTTGGCTTTCCTCTGAAGCTGTATTTCCCGGAGAACAAGTTTCACTGCTGCAGGACTTCCACTaGGCGCCTTACAAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: LGIWLSSEAVFPGEQVSLLQDFH*APYKLD
Trigger: ATCCAGCTTGTAAGGCGCCCAGTGGAAGTCCTGCAG...CAGTGAAACTTGTTCTCCGGGAAATACAGCTTCAGAGGAAAGCCAAATGCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 72 bp TCTTCAACCATCTTAGGGCTATTACTTGACCCTTTATaGACAACTCCTTGGCCACTGCGAAGGGGTGACCCT +
Preference number: 4 (lower is better)
Translates to: SSTILGLLLDPL*TTPWPLRRGDP
Trigger: AGGGTCACCCCTTCGCAGTGGCCAAGGAGTTGTCAATAAAGGGTCAAGTAATAGCCCTAAGATGGTTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 72 bp GGAACGTTCGTATTCTTCTTTGGCTTGAAGCCACACTaGAACCAGTTGTCGACTTGGGGCACATTTGCAAGG +
Preference number: 4 (lower is better)
Translates to: GTFVFFFGLKPH*NQLSTWGTFAR
Trigger: CCTTGCAAATGTGCCCCAAGTCGACAACTGGTTCAAGTGTGGCTTCAAGCCAAAGAAGAATACGAACGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 72 bp AGGCAGTTTCTTGGAACGTTCGTATTCTTCTTTGGCTaGAAGCCACACTTGAACCAGTTGTCGACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: RQFLGTFVFFFG*KPHLNQLSTWG
Trigger: GCCCCAAGTCGACAACTGGTTCAAGTGTGGCTTCAAGCCAAAGAAGAATACGAACGTTCCAAGAAACTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTACTTTGTGTCTAGTGTaGCCTTTGCTTGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGTLCLV*PLLDSL
Trigger: CAAAGAGTCAAGCAAAGGTCACACTAGACACAAAGT...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGTGCTGCTTGCTGGCTaGGGCTTGGCTTTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCVLLAG*GLAFLF
Trigger: AAACAGAAAAGCCAAGCCTCAGCCAGCAAGCAGCAC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTCCCATGCTATTTGTTTaGTTGGACTTCTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGPMLFV*LDFSRK
Trigger: CTTCCTTGAGAAGTCCAATCAAACAAATAGCATGGG...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGTCGAGTTTCTACCATaGGGAGCCGTCCACCAATCT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCVEFLP*GAVHQS
Trigger: AGATTGGTGGACGGCTCCTCATGGTAGAAACTCGAC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CTATTTACTCGGGAGAGTTTGAAAAGTACTGGGCAGTTCAGAGAAACACATGGGGTCGAGTTTCTACCATaGGGAGCCGTCCACCAATCT +
Preference number: 4 (lower is better)
Translates to: LFTRESLKSTGQFRETHGVEFLP*GAVHQS
Trigger: AGATTGGTGGACGGCTCCTCATGGTAGAAACTCGAC...CCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACAGCTTAAGTCCCAACTaGCGCGCATCAAGCATTCGT +
Preference number: 4 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHSLSPN*RASSIR
Trigger: ACGAATGCTTGATGCGCGTCAGTTGGGACTTAAGCT...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CAGCTGCAAATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACGTCTCTCTGGCTTTGTaGACAATACTATCGCCAACC +
Preference number: 4 (lower is better)
Translates to: QLQICSQFCHLAPERSSDVSLAL*TILSPT
Trigger: GGTTGGCGATAGTATTGTTCACAAAGCCAGAGAGAC...GTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATTTGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCACTCGCTCCCCAACCTaGGGCTCAGAGCGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSTRSPT*GSERRS
Trigger: TGACCGGCGCTCTGAGCCTCAGGTTGGGGAGCGAGT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGACTCGCTCCCCAACCTaGGGCTCAGAGCGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWTRSPT*GSERRS
Trigger: TGACCGGCGCTCTGAGCCTCAGGTTGGGGAGCGAGT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACACTCGCTCCCCAACCTaGGGCTCAGAGCGCCGGTCA +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHTRSPT*GSERRS
Trigger: TGACCGGCGCTCTGAGCCTCAGGTTGGGGAGCGAGT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTACTACAGATGCCATGCTaGGTTAGGTCATCACACACA +
Preference number: 4 (lower is better)
Translates to: RQPFVRGNPRNASESHILLQMPC*VRSSHT
Trigger: TGTGTGTGATGACCTAACTCAGCATGGCATCTGTAG...TAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGGCTGCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCACAAGTTGCTCCTGTTaGCGTTCCAACTCCCGGATT +
Preference number: 4 (lower is better)
Translates to: SSDISQYLKRQPFVRGNPTSCSC*RSNSRI
Trigger: AATCCGGGAGTTGGAACGTCAACAGGAGCAACTTGT...GGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTTCGAGCTTTCGTCGGTaGTGGTGCTGCCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFSSFRR*WCCRHC
Trigger: GCAGTGGCGGCAGCACCAGCACCGACGAAAGCTCGA...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000422377.5
CDS-3UTR GCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCTCAGAGTTGGGTCCTaGAGGACTTCCACTGGGCGC +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFLRVGS*RTSTGR
Trigger: GCGCCCAGTGGAAGTCCTGCAGGACCCAACTCTGAG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTAGCAGAATCTTGGGTTTTATTCTaGCGGGGTCGCTCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: PFVRGNPRNASESHILAESWVLF*RGRSED
Trigger: GTCTTCGGAGCGACCCCGGCAGAATAAAACCCAAGA...TTCTGCTAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCTTTCGTCGGTGCTaGTGCTGCCGCCACTGCCGC +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWSFRRC*CCRHCR
Trigger: GCGGCAGTGGCGGCAGCACCAGCACCGACGAAAGCT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CAGCTGCAAATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACTTGCTGTCCCATCTCTaGGACATCACCAAACTAAGC +
Preference number: 4 (lower is better)
Translates to: QLQICSQFCHLAPERSSDLLSHL*DITKLS
Trigger: GCTTAGTTTGGTGATGTCCCAGAGATGGGACAGCAA...GTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATTTGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTGTGTTAGTGGATAAATaGGATATTTGGTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGVLVDK*DIWLQG
Trigger: CCCCTGCAACCAAATATCCCATTTATCCACTAACAC...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TTTGCAAGTCGAGTTTCTACCATGAGGAGCCGTCCACCAATCTCCCTGGGCTTTGTGGAGAAGAATTTATaGGACTTGTGCTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: FASRVSTMRSRPPISLGFVEKNL*DLCFSQ
Trigger: CTGAGAGAAGCACAAGTCCCATAAATTCTTCTCCAC...AAAGCCCAGGGAGATTGGTGGACGGCTCCTCATGGTAGAAACTCGACTTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTTTAGGGGTATATGCTTaGTCCAGCTTTGATTCTAGG +
Preference number: 4 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGLGVYA*SSFDSR
Trigger: CCTAGAATCAAAGCTGGACCAAGCATATACCCCTAA...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTCAAATTCTGATCAGCTaGGACAAACTGACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGQILIS*DKLTSR
Trigger: TCTGGAAGTCAGTTTGTCCCAGCTGATCAGAATTTG...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CAGCTGCAAATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACGAACAGAGCACAGATTaGGTCAAATTCAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: QLQICSQFCHLAPERSSDEQSTD*VKFRIR
Trigger: CCGGATCCTGAATTTGACCCAATCTGTGCTCTGTTC...GTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATTTGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp ACCCGAGAGATCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGTACAAGCTGGATAAGTaGTACTCCGGGGGTCCCATA +
Preference number: 4 (lower is better)
Translates to: TREIIRHKSILKAAALCKYKLDK*YSGGPI
Trigger: TATGGGACCCCCGGAGTACCACTTATCCAGCTTGTA...CTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGATCTCTCGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACATTCAGTCTCAGAGTTaGGTCCTGCAGGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHIQSQS*VLQDFH
Trigger: GTGGAAGTCCTGCAGGACCCAACTCTGAGACTGAAT...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGGGCGGGGGCAGCCGCTaGGACGGTTTTTCACAAGGT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWGGGSR*DGFSQG
Trigger: ACCTTGTGAAAAACCGTCTCAGCGGCTGCCCCCGCC...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000358835.7
ENST00000422377.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAGTCACTATCCTTACTaGAAACATGTTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCSHYPY*KHVRRR
Trigger: GCGGCGGCGAACATGTTTTCAGTAAGGATAGTGACT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATGTGCTGCTTGCTGGCTaGGGCTTGGCTTTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHVLLAG*GLAFLF
Trigger: AAACAGAAAAGCCAAGCCTCAGCCAGCAAGCAGCAC...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTCCAATTTCCATGGGATaGGGTAGACTAATTTTTGAG +
Preference number: 4 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGPISMG*GRLIFE
Trigger: CTCAAAAATTAGTCTACCTCATCCCATGGAAATTGG...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CAGCTGCAAATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATGCAAATCATCTCGTaGACTGGGGAATGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: QLQICSQFCHLAPERSSDMQIIS*TGECLQ
Trigger: TTGCAGACATTCCCCAGTTCACGAGATGATTTGCAT...GTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATTTGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACACCTTGAATCCAGTCTaGATTGTTTGGCTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHTLNPV*IVWLWE
Trigger: CTCCCACAGCCAAACAATTCAGACTGGATTCAAGGT...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCCCCCAGGAATGCATCTaGATCTCATATCCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: SSDISQYLKRQPFVRGNPPQECI*ISYPSR
Trigger: TCTGCTAGGATATGAGATTCAGATGCATTCCTGGGG...GGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGA
47% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AGAAAGATAGCTTTCTGGCTGCTGTCCATAACCATCGTATGGCACATAGAGGTATTCCACACGGTACTGTaGACCCCTTGTCAGTACATG +
Preference number: 4 (lower is better)
Translates to: RKIAFWLLSITIVWHIEVFHTVL*TPCQYM
Trigger: CATGTACTGACAAGGGGTTCACAGTACCGTGTGGAA...TACCTCTATGTGCCATACGATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCTTCCACACGGTACTGTaGACCCCTTGTCAGTACATG +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCFHTVL*TPCQYM
Trigger: CATGTACTGACAAGGGGTTCACAGTACCGTGTGGAA...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAGCTTAAGTCCCAACTaGCGCGCATCAAGCATTCGT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCSLSPN*RASSIR
Trigger: ACGAATGCTTGATGCGCGTCAGTTGGGACTTAAGCT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp ACCCGAGAGATCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGGTCTCTCTGGCTTTGTaGACAATACTATCGCCAACC +
Preference number: 4 (lower is better)
Translates to: TREIIRHKSILKAAALCKVSLAL*TILSPT
Trigger: GGTTGGCGATAGTATTGTTCACAAAGCCAGAGAGAC...CTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGATCTCTCGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp TTTGCAAGTCGAGTTTCTACCATGAGGAGCCGTCCACCAATCTCCCTGGGCTTTTATAGTCCAAAGGACTaGTCAGTTTCTAACGTTCCA +
Preference number: 4 (lower is better)
Translates to: FASRVSTMRSRPPISLGFYSPKD*SVSNVP
Trigger: TGGAACGTTAGAAACTGAGCAGTCCTTTGGACTATA...AAAGCCCAGGGAGATTGGTGGACGGCTCCTCATGGTAGAAACTCGACTTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTCTTAATCTGTGCTCTTaGGCGACTAGTTTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGLNLCS*ATSFSY
Trigger: ATAGGAAAAACTAGTCGCGCAAGAGCACAGATTAAG...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCTTTTTCGGGATCACTTaGAGAGGCAACTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCFFGIT*RGNWWQ
Trigger: CTGCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAA...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTCTGTGGGGTATTTACTaGTGCAAATTGATTCTTTGC +
Preference number: 4 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGLWGIY*CKLILC
Trigger: GCAAAGAATCAATTTGCAGCAGTAAATACCCCACAG...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGCCCCTGCAGCGGGCTaGCCATGTAGTAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSAPAAG*PCSSLQ
Trigger: CTGCAGACTACTACATGGCCAGCCCGCTGCAGGGGC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGGCCCCTGCAGCGGGCTaGCCATGTAGTAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWAPAAG*PCSSLQ
Trigger: CTGCAGACTACTACATGGCCAGCCCGCTGCAGGGGC...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTGCCCCTGCAGCGGGCTaGCCATGTAGTAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LSHSLYMIHTHLFQLQICAPAAG*PCSSLQ
Trigger: CTGCAGACTACTACATGGCCAGCCCGCTGCAGGGGC...ACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CAGCTGCAAATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACACACATGCTGAGCAGTaGAAGATGGATTGCCTAAAG +
Preference number: 4 (lower is better)
Translates to: QLQICSQFCHLAPERSSDTHAEQ*KMDCLK
Trigger: CTTTAGGCAATCCATCTTCCACTGCTCAGCATGTGT...GTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATTTGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTTTCACAGGAAGATACTaGGAGGATCTCTTTCTTACT +
Preference number: 4 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGFTGRY*EDLFLT
Trigger: AGTAAGAAAGAGATCCTCCCAGTATCTTCCTGTGAA...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCAGCTCTTGGATCTGTaGGAGACCAGCAGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFQLLDL*ETSSEV
Trigger: CACCTCGCTGCTGGTCTCCCACAGATCCAAGAGCTG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCGATTTCTTCAGCTCTTaGATCTGTGGGAGACCAGCA +
Preference number: 4 (lower is better)
Translates to: SSDISQYLKRQPFVRGNPDFFSS*ICGRPA
Trigger: TGCTGGTCTCCCACAGATCCAAGAGCTGAAGAAATC...GGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp ACCCGAGAGATCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGGGAATCTGGGGATATTaGTTGTTGCCAAGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: TREIIRHKSILKAAALCKGIWGY*LLPRGN
Trigger: ATTCCCCCTTGGCAACAACCAATATCCCCAGATTCC...CTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGATCTCTCGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTAAGCTGTTCTAACATTTaGAGATTTCCACGGACACGG +
Preference number: 4 (lower is better)
Translates to: RQPFVRGNPRNASESHILSCSNI*RFPRTR
Trigger: CCGTGTCCGTGGAAATCTCCAAATGTTAGAACAGCT...TAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGGCTGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATCCCAAGTTCTCCACATaGCCAAGGCAGGTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHPKFST*PRQVEK
Trigger: CTTTTCCACCTGCCTTGGCCATGTGGAGAACTTGGG...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCTACAAGCTGGATAAGTaGTACTCCGGGGGTCCCATA +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCYKLDK*YSGGPI
Trigger: TATGGGACCCCCGGAGTACCACTTATCCAGCTTGTA...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGGGCGCCTTACAAGCTaGATAAGTGGTACTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFGRLTS*ISGTPG
Trigger: CCCCGGAGTACCACTTATCCAGCTTGTAAGGCGCCC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGGGGCGCCTTACAAGCTaGATAAGTGGTACTCCGGGG +
Preference number: 4 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQGRLTS*ISGTPG
Trigger: CCCCGGAGTACCACTTATCCAGCTTGTAAGGCGCCC...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCATTCAGTCTCAGAGTTaGGTCCTGCAGGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCIQSQS*VLQDFH
Trigger: GTGGAAGTCCTGCAGGACCCAACTCTGAGACTGAAT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR CAA 72 bp AAGCTGTATTTCCCGGAGAACAAGTTTCACTGTGCTTaGACTGTTCCGCTATGCACACAATCTGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: KLYFPENKFHCA*TVPLCTQSAAD
Trigger: GTCAGCAGCAGATTGTGTGCATAGCGGAACAGTCAAAGCACAGTGAAACTTGTTCTCCGGGAAATACAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 72 bp GATTTCTTGGTTGAGGATGACTGCAACATGCTGAGGTaGGCTCCGACATTTACTACAGATGCCATGCTGAGT +
Preference number: 4 (lower is better)
Translates to: DFLVEDDCNMLR*APTFTTDAMLS
Trigger: ACTCAGCATGGCATCTGTAGTAAATGTCGGAGCCAACCTCAGCATGTTGCAGTCATCCTCAACCAAGAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAAGTCACTATCCTTACTaGAAACATGTTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: NLFSILSSGTREIIRHKSSHYPY*KHVRRR
Trigger: GCGGCGGCGAACATGTTTTCAGTAAGGATAGTGACT...TGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GACATAAGTGGTTTCAGAATGTTAGCAGTTCGAGGGGTGAAGCTGCCATTTTTAAGTCACTATCCTTACTaGAAACATGTTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: DISGFRMLAVRGVKLPFLSHYPY*KHVRRR
Trigger: GCGGCGGCGAACATGTTTTCAGTAAGGATAGTGACT...TAAAAATGGCAGCTTCACCCCTCGAACTGCTAACATTCTGAAACCACTTATGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCTTGGCTGGTGTACACTaGAGCATTTCAGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCLAGVH*SISGDR
Trigger: TCTGTCTCCTGAAATGCTTCAGTGTACACCAGCCAA...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAGTTTCACTGTGCTTTaGCTGTTCCGCTATGCACAC +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCSFTVL*LFRYAH
Trigger: GTGTGCATAGCGGAACAGTCAAAGCACAGTGAAACT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAATACCCTGGCCTTGGATTCTaGGTCATTGCTGAGAATGCT +
Preference number: 4 (lower is better)
Translates to: CSQFCHLAPERSSDISQYPGLGF*VIAENA
Trigger: AGCATTCTCAGCAATGACTCAGAATCCAAGGCCAGG...GTATTGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCTTTCACTTGCAGTTTaGCTACATCCCGTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCLSLAV*LHPVVG
Trigger: ACCAACCACGGGATGTAGTCAAACTGCAAGTGAAAG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATCCCCAGGAATGCATCTaGATCTCATATCCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: DISQYLKRQPFVRGNPRNPQECI*ISYPSR
Trigger: TCTGCTAGGATATGAGATTCAGATGCATTCCTGGGG...ATTCCTGGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACGCTTCGGCAATTTCCTaGCCAATCTTAAAAGACTGC +
Preference number: 4 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHASAIS*PILKDC
Trigger: GCAGTCTTTTAAGATTGGTCAGGAAATTGCCGAAGC...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CAGCTGCAAATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACAATACTGGGTCCTTCTaGTCCAGTGTTTCATACATG +
Preference number: 4 (lower is better)
Translates to: QLQICSQFCHLAPERSSDNTGSF*SSVSYM
Trigger: CATGTATGAAACACTGGATCAGAAGGACCCAGTATT...GTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATTTGCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AGAAAGATAGCTTTCTGGCTGCTGTCCATAACCATCGTATGGCACATAGAGGTAATGACTGCAACATGCTaGGGTTGGCTCCGACATTTA +
Preference number: 4 (lower is better)
Translates to: RKIAFWLLSITIVWHIEVMTATC*GWLRHL
Trigger: TAAATGTCGGAGCCAACCTCAGCATGTTGCAGTCAT...TACCTCTATGTGCCATACGATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATCCTCGGTCCCAGGCTaGAGCTCTTGTTGCCATGAT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKSSVPG*SSCCHD
Trigger: ATCATGGCAACAAGAGCTGCAGCCTGGGACCGAGGA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAAACATATAGTGTGCTaGTTGCTGGCTGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCKHIVC*LLAEAW
Trigger: CCAAGCCTCAGCCAGCAAGCAGCACACTATATGTTT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTAGTCTCCTGATGACCTaGAAGTTTCCTTTTATTCAA +
Preference number: 4 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGSLLMT*KFPFIQ
Trigger: TTGAATAAAAGGAAACTTGCAGGTCATCAGGAGACT...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp TTATCATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTGGCTTGACTGTTCCGCTATaGACACAATCTGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: LSSSSSSFSGSLAEATGGLTVPL*TQSAAD
Trigger: GTCAGCAGCAGATTGTGTGCATAGCGGAACAGTCAA...GCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATGGGCTAAGGCCAGGTaGTTCAGGAAGCCTTTCCAG +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKWAKAR*FRKPFQ
Trigger: CTGGAAAGGCTTCCTGAAGCACCTGGCCTTAGCCCA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTAGCAGAACGTCTAGTTCGAGCATaGAACTCCACACTGATTAGG +
Preference number: 4 (lower is better)
Translates to: PFVRGNPRNASESHILAERLVRA*NSTLIR
Trigger: CCTAATCAGTGTGGAGTTGCATGCTCGAACTAGACG...TTCTGCTAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCTCAGAGTTGGGTCCTaGAGGACTTCCACTGGGCGC +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHLRVGS*RTSTGR
Trigger: GCGCCCAGTGGAAGTCCTGCAGGACCCAACTCTGAG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CGGCCAACAATATTTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCACTCAGAGTTGGGTCCTaGAGGACTTCCACTGGGCGC +
Preference number: 4 (lower is better)
Translates to: RPTIFISLIVYDPYSSLSLRVGS*RTSTGR
Trigger: GCGCCCAGTGGAAGTCCTGCAGGACCCAACTCTGAG...TGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAAATATTGTTGGCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AAAGTGATTGGAAATCCAAAACGAGAACAGAGTTGCTATAGAAGCGGGATTCAGTCTTGGGTTTTATTCTaGCGGGGTCGCTCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: KVIGNPKREQSCYRSGIQSWVLF*RGRSED
Trigger: GTCTTCGGAGCGACCCCGGCAGAATAAAACCCAAGA...CTGAATCCCGCTTCTATAGCAACTCTGTTCTCGTTTTGGATTTCCAATCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCTTGCTGTCCCATCTCTaGGACATCACCAAACTAAGC +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCLLSHL*DITKLS
Trigger: GCTTAGTTTGGTGATGTCCCAGAGATGGGACAGCAA...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGGAGTCGGGAACTTTTaGCCAAAAGTCCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCGVGNF*PKVLQR
Trigger: CCTTTGAAGGACTTTTGGCCAAAAGTTCCCGACTCC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGATTTCTTCAGCTCTTaGATCTGTGGGAGACCAGCA +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCDFFSS*ICGRPA
Trigger: TGCTGGTCTCCCACAGATCCAAGAGCTGAAGAAATC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAATATTATTGACAACTCCTTaGCCACTGCGAAGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: LFSILSSGTREIIRHKSILLTTP*PLRRGD
Trigger: GTCACCCCTTCGCAGTGGCCAAGGAGTTGTCAATAA...TATTGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAACCAGTTGTCGACTTaGGGCACATTTGCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCNQLST*GTFARH
Trigger: ATGCCTTGCAAATGTGCCCCAAGTCGACAACTGGTT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTTTTTACAACTCCAGTTaGCTTGGTTTTAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGFYNSS*LGFRQF
Trigger: AAACTGCCTAAAACCAAGCCAACTGGAGTTGTAAAA...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TTATCATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTGGCGAACAGAGCACAGATTaGGTCAAATTCAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: LSSSSSSFSGSLAEATGGEQSTD*VKFRIR
Trigger: CCGGATCCTGAATTTGACCCAATCTGTGCTCTGTTC...GCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACCCAAGTTCTCCACATaGCCAAGGCAGGTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEPKFST*PRQVEK
Trigger: CTTTTCCACCTGCCTTGGCCATGTGGAGAACTTGGG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTAGCCAACCTCAATGCATaGCATTCTCCCAGAAAAATT +
Preference number: 4 (lower is better)
Translates to: RQPFVRGNPRNASESHILANLNA*HSPRKI
Trigger: AATTTTTCTGGGAGAATGCCATGCATTGAGGTTGGC...TAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGGCTGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCTGCAGGACTTCCACTaGGCGCCTTACAAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFLQDFH*APYKLD
Trigger: ATCCAGCTTGTAAGGCGCCCAGTGGAAGTCCTGCAG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp ACCCGAGAGATCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGATGGTACACATACTaGAGCAAATCCAACACCTGC +
Preference number: 4 (lower is better)
Translates to: TREIIRHKSILKAAALCKRWYTY*SKSNTC
Trigger: GCAGGTGTTGGATTTGCTCCAGTATGTGTACCATCT...CTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGATCTCTCGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 72 bp GTATTCTTCTTTGGCTTGAAGCCACACTTGAACCAGTaGTCGACTTGGGGCACATTTGCAAGGCATAATCAC +
Preference number: 4 (lower is better)
Translates to: VFFFGLKPHLNQ*STWGTFARHNH
Trigger: GTGATTATGCCTTGCAAATGTGCCCCAAGTCGACAACTGGTTCAAGTGTGGCTTCAAGCCAAAGAAGAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAAACCTGTGATCTTGTaGCTCAGGTTGGCTCATTTG +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCKPVIL*LRLAHL
Trigger: CAAATGAGCCAACCTGAGTCACAAGATCACAGGTTT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTAGCAGAAAAACCTGTGATCTTGTaGCTCAGGTTGGCTCATTTG +
Preference number: 4 (lower is better)
Translates to: PFVRGNPRNASESHILAEKPVIL*LRLAHL
Trigger: CAAATGAGCCAACCTGAGTCACAAGATCACAGGTTT...TTCTGCTAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GACATAAGTGGTTTCAGAATGTTAGCAGTTCGAGGGGTGAAGCTGCCATTTTTATTGGCTGGTGTACACTaGAGCATTTCAGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: DISGFRMLAVRGVKLPFLLAGVH*SISGDR
Trigger: TCTGTCTCCTGAAATGCTTCAGTGTACACCAGCCAA...TAAAAATGGCAGCTTCACCCCTCGAACTGCTAACATTCTGAAACCACTTATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TCTCAGAGAGGTACAGCCAAATTTGAACTCATCATACTTTCCCAAGTTCTCCACTTGGCTGGTGTACACTaGAGCATTTCAGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: SQRGTAKFELIILSQVLHLAGVH*SISGDR
Trigger: TCTGTCTCCTGAAATGCTTCAGTGTACACCAGCCAA...GTGGAGAACTTGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTCTCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CCCTTAAAAAGCATTGCCTCTTTTTCTGCAGCAGCCATGATTTCTTCAGCTCTTGTCCATGAAAACAGGTaGCTCACTCAGTCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: PLKSIASFSAAAMISSALVHENR*LTQSLG
Trigger: ACCCAAAGACTGAGTGAGTCACCTGTTTTCATGGAC...AAGAGCTGAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATGCTTTTTAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGTGCTGCTTGCTGGCTaGGGCTTGGCTTTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKVLLAG*GLAFLF
Trigger: AAACAGAAAAGCCAAGCCTCAGCCAGCAAGCAGCAC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGTTTCTTGAAACATACAGTTCTAAATCTTCACAGGCCACGTCTACAAGTTCACGTGCTGCTTGCTGGCTaGGGCTTGGCTTTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: CFLKHTVLNLHRPRLQVHVLLAG*GLAFLF
Trigger: AAACAGAAAAGCCAAGCCTCAGCCAGCAAGCAGCAC...GTGAACTTGTAGACGTGGCCTGTGAAGATTTAGAACTGTATGTTTCAAGAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAGCATTGTAAGATGGTaGGGGAGGAGAAAGAATAGC +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCSIVRW*GRRKNS
Trigger: GCTATTCTTTCTCCTCCCTCACCATCTTACAATGCT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTATCATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTGGCAGCATTGTAAGATGGTaGGGGAGGAGAAAGAATAGC +
Preference number: 4 (lower is better)
Translates to: LSSSSSSFSGSLAEATGGSIVRW*GRRKNS
Trigger: GCTATTCTTTCTCCTCCCTCACCATCTTACAATGCT...GCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAAGTTTCACTGTGCTTTaGCTGTTCCGCTATGCACAC +
Preference number: 4 (lower is better)
Translates to: NLFSILSSGTREIIRHKSSFTVL*LFRYAH
Trigger: GTGTGCATAGCGGAACAGTCAAAGCACAGTGAAACT...TGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAAAAGAGGTATTGGCTaGGTCAAGAGACTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCKRGIG*VKRLSH
Trigger: ATGGGACAGTCTCTTGACTCAGCCAATACCTCTTTT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGCGACGATTCTCATTGCTATCTATGGTTGACTTCTCAAAAATTTCAGGACTTAGTCGAGTTTCTACCATaGGGAGCCGTCCACCAATCT +
Preference number: 4 (lower is better)
Translates to: GDDSHCYLWLTSQKFQDLVEFLP*GAVHQS
Trigger: AGATTGGTGGACGGCTCCTCATGGTAGAAACTCGAC...TAAGTCCTGAAATTTTTGAGAAGTCAACCATAGATAGCAATGAGAATCGTCGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGTCGAGTTTCTACCATaGGGAGCCGTCCACCAATCT +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFVEFLP*GAVHQS
Trigger: AGATTGGTGGACGGCTCCTCATGGTAGAAACTCGAC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATCTTTCACTTGCAGTTTaGCTACATCCCGTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SNLRIINILLGMCCSGEYLSLAV*LHPVVG
Trigger: ACCAACCACGGGATGTAGTCAAACTGCAAGTGAAAG...ATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAATCACTAGAGGCTCTTaGGGCTCACTGCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTITRGS*GSLQGL
Trigger: AAGCCCCTGCAGTGAGCCTCAAGAGCCTCTAGTGAT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACAGTGGAGTGTCAGATaGGATGCAGTAGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEQWSVR*DAVEQS
Trigger: GCTCTGTTCTACTGCATCTCATCTGACACTCCACTG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTCCACACGGTACTGTaGACCCCTTGTCAGTACATG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEFHTVL*TPCQYM
Trigger: CATGTACTGACAAGGGGTTCACAGTACCGTGTGGAA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAAGCTTAAGTCCCAACTaGCGCGCATCAAGCATTCGT +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNESLSPN*RASSIR
Trigger: ACGAATGCTTGATGCGCGTCAGTTGGGACTTAAGCT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGCTTCGGCAATTTCCTaGCCAATCTTAAAAGACTGC +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCASAIS*PILKDC
Trigger: GCAGTCTTTTAAGATTGGTCAGGAAATTGCCGAAGC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACCGAAGTAACACGTCTTaGTACAGACAGTTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHRSNTS*YRQFKE
Trigger: TTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCG...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGGCTGCAGCTCTTGTTaGCATGATGATGATGTCACG +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQGCSSC*HDDDVT
Trigger: CGTGACATCATCATCATGGCAACAAGAGCTGCAGCC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358835.7
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACACATGTCTTCTGACCTaGCGGGGTCGCTCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHTCLLT*RGRSED
Trigger: GTCTTCGGAGCGACCCCGGCAGGTCAGAAGACATGT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000358835.7
ENST00000368802.8
CDS-3UTR GCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAATGGGATATTTGGTTaGAGGGGAGTCGGGAACTTT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCNGIFG*RGVGNF
Trigger: AAAGTTCCCGACTCCCCTGCAACCAAATATCCCATT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACGAACAAGTTTCACTGTaGTTTGACTGTTCCGCTATG +
Preference number: 4 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHEQVSL*FDCSAM
Trigger: CATAGCGGAACAGTCAAAGCACAGTGAAACTTGTTC...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AGAAAGATAGCTTTCTGGCTGCTGTCCATAACCATCGTATGGCACATAGAGGTAAGGGGAGGAGAGTATTaGAGTAAAAGAGGTATTGGC +
Preference number: 4 (lower is better)
Translates to: RKIAFWLLSITIVWHIEVRGGEY*SKRGIG
Trigger: GCCAATACCTCTTTTACTGCAATACTCTCCTCCCCT...TACCTCTATGTGCCATACGATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp TTAGGCATTTGGCTTTCCTCTGAAGCTGTATTTCCCGGAGAACAAGTTTCACTGATCCTCCTTGGTATGTaGTGTAGTGGGGAGTATACA +
Preference number: 4 (lower is better)
Translates to: LGIWLSSEAVFPGEQVSLILLGM*CSGEYT
Trigger: TGTATACTCCCCACTACAGCACATACCAAGGAGGAT...CAGTGAAACTTGTTCTCCGGGAAATACAGCTTCAGAGGAAAGCCAAATGCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTTTTTCGGGATCACTTaGAGAGGCAACTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQFFGIT*RGNWWQ
Trigger: CTGCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTAGCAGAATATCGCCAACCTCAATaGATGGCATTCTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: PFVRGNPRNASESHILAEYRQPQ*MAFSQK
Trigger: TTTCTGGGAGAATGCCATGCATTGAGGTTGGCGATA...TTCTGCTAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GACTCGAAAGGTAAAGAGGGGAAAACGCTGATGAAGAACATGAAAGCTCACATTTTGGTTGAGGATGACTaGAACATGCTGAGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: DSKGKEGKTLMKNMKAHILVEDD*NMLRLA
Trigger: AGCCAACCTCAGCATGTTGCAGTCATCCTCAACCAA...AATGTGAGCTTTCATGTTCTTCATCAGCGTTTTCCCCTCTTTACCTTTCGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATCTTGGGTTTTATTCTaGCGGGGTCGCTCCGAAGAC +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKSWVLF*RGRSED
Trigger: GTCTTCGGAGCGACCCCGGCAGAATAAAACCCAAGA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTAGCAGAAGATAAATGGGATATTTaGTTGCAGGGGAGTCGGGAA +
Preference number: 4 (lower is better)
Translates to: PFVRGNPRNASESHILAEDKWDI*LQGSRE
Trigger: TTCCCGACTCCCCTGCAACCAAATATCCCATTTATC...TTCTGCTAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACGTGGAGAAGAATTTATaGGACTTGTGCTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHVEKNL*DLCFSQ
Trigger: CTGAGAGAAGCACAAGTCCCATAAATTCTTCTCCAC...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GACTCGAAAGGTAAAGAGGGGAAAACGCTGATGAAGAACATGAAAGCTCACATTAGACCAGCAGCGAGGTaGAGAAGAATTTATGGGACT +
Preference number: 4 (lower is better)
Translates to: DSKGKEGKTLMKNMKAHIRPAAR*RRIYGT
Trigger: AGTCCCATAAATTCTTCTCCACCTCGCTGCTGGTCT...AATGTGAGCTTTCATGTTCTTCATCAGCGTTTTCCCCTCTTTACCTTTCGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCAGCTCTTGGATCTGTaGGAGACCAGCAGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHQLLDL*ETSSEV
Trigger: CACCTCGCTGCTGGTCTCCCACAGATCCAAGAGCTG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GACATAAGTGGTTTCAGAATGTTAGCAGTTCGAGGGGTGAAGCTGCCATTTTTAGATTTCTTCAGCTCTTaGATCTGTGGGAGACCAGCA +
Preference number: 4 (lower is better)
Translates to: DISGFRMLAVRGVKLPFLDFFSS*ICGRPA
Trigger: TGCTGGTCTCCCACAGATCCAAGAGCTGAAGAAATC...TAAAAATGGCAGCTTCACCCCTCGAACTGCTAACATTCTGAAACCACTTATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp ACCCGAGAGATCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGTTAGGGGTATATGCTTaGTCCAGCTTTGATTCTAGG +
Preference number: 4 (lower is better)
Translates to: TREIIRHKSILKAAALCKLGVYA*SSFDSR
Trigger: CCTAGAATCAAAGCTGGACCAAGCATATACCCCTAA...CTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGATCTCTCGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AGAAAGATAGCTTTCTGGCTGCTGTCCATAACCATCGTATGGCACATAGAGGTACTCCCTGGGCTTTTCTaGTACATCAGAAGGATTACT +
Preference number: 4 (lower is better)
Translates to: RKIAFWLLSITIVWHIEVLPGLF*YIRRIT
Trigger: AGTAATCCTTCTGATGTACCAGAAAAGCCCAGGGAG...TACCTCTATGTGCCATACGATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGTCCACCAATCTCCCTaGGCTTTTCTGGTACATCAG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEVHQSP*AFLVHQ
Trigger: CTGATGTACCAGAAAAGCCCAGGGAGATTGGTGGAC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CAGCTGCAAATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACACTTACATCCATTTTTaGAGGCACTACAGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: QLQICSQFCHLAPERSSDTYIHF*RHYRFV
Trigger: GACAAACCTGTAGTGCCTCCAAAAATGGATGTAAGT...GTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATTTGCAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATCCAAGGGGGAATTACTaGAGAATCAGGGGAGCTATA +
Preference number: 4 (lower is better)
Translates to: SNLRIINILLGMCCSGEYPRGNY*RIRGAI
Trigger: TATAGCTCCCCTGATTCTCCAGTAATTCCCCCTTGG...ATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAATACGGAATCTGGGGATATTaGTTGTTGCCAAGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: CSQFCHLAPERSSDISQYGIWGY*LLPRGN
Trigger: ATTCCCCCTTGGCAACAACCAATATCCCCAGATTCC...GTATTGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GACATAAGTGGTTTCAGAATGTTAGCAGTTCGAGGGGTGAAGCTGCCATTTTTACTCAATTTTGTCATCTaGCACCCGAGAGATCATCCG +
Preference number: 4 (lower is better)
Translates to: DISGFRMLAVRGVKLPFLLNFVI*HPRDHP
Trigger: CGGATGATCTCTCGGGTGCCAGATGACAAAATTGAG...TAAAAATGGCAGCTTCACCCCTCGAACTGCTAACATTCTGAAACCACTTATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAACCCAAGTTCTCCACATaGCCAAGGCAGGTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKPKFST*PRQVEK
Trigger: CTTTTCCACCTGCCTTGGCCATGTGGAGAACTTGGG...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGCCCAAGTTCTCCACATaGCCAAGGCAGGTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQPKFST*PRQVEK
Trigger: CTTTTCCACCTGCCTTGGCCATGTGGAGAACTTGGG...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTAAACTTCAATTTCACTaGTTTAGGATTGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGKLQFH*FRIGSS
Trigger: ACTGCTACCAATCCTAAACCAGTGAAATTGAAGTTT...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTATTTTGCATCAAATACTaGGTCCTTCTGATCCAGTGT +
Preference number: 4 (lower is better)
Translates to: RQPFVRGNPRNASESHILFCIKY*VLLIQC
Trigger: ACACTGGATCAGAAGGACCCAGTATTTGATGCAAAA...TAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGGCTGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAATATGTAAGTTCAAGGGCTaGCACACAAGCTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LFSILSSGTREIIRHKSICKFKG*HTSSWF
Trigger: AAACCAGGAGCTTGTGTGCCAGCCCTTGAACTTACA...TATTGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATTGTAAGTTCAAGGGCTaGCACACAAGCTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHCKFKG*HTSSWF
Trigger: AAACCAGGAGCTTGTGTGCCAGCCCTTGAACTTACA...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TCTCAGAGAGGTACAGCCAAATTTGAACTCATCATACTTTCCCAAGTTCTCCACATAAATGATGACGTATaGCACTCGCTCCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: SQRGTAKFELIILSQVLHINDDV*HSLPNL
Trigger: CAGGTTGGGGAGCGAGTGCCATACGTCATCATTTAT...GTGGAGAACTTGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTCTCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATACAAGCTGGATAAGTaGTACTCCGGGGGTCCCATA +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEYKLDK*YSGGPI
Trigger: TATGGGACCCCCGGAGTACCACTTATCCAGCTTGTA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTTGACTTCTTACAAGCTGGATAAGTaGTACTCCGGGGGTCCCATA +
Preference number: 4 (lower is better)
Translates to: YFSTGCGDDSHCYLWLTSYKLDK*YSGGPI
Trigger: TATGGGACCCCCGGAGTACCACTTATCCAGCTTGTA...AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACTGCAGGACTTCCACTaGGCGCCTTACAAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTLQDFH*APYKLD
Trigger: ATCCAGCTTGTAAGGCGCCCAGTGGAAGTCCTGCAG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGATTCAGTCTCAGAGTTaGGTCCTGCAGGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQIQSQS*VLQDFH
Trigger: GTGGAAGTCCTGCAGGACCCAACTCTGAGACTGAAT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAATTCAGTCTCAGAGTTaGGTCCTGCAGGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEIQSQS*VLQDFH
Trigger: GTGGAAGTCCTGCAGGACCCAACTCTGAGACTGAAT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAACTCCCGGATTTCTTaGTTGAGGATGACTGCAACA +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCNSRIS*LRMTAT
Trigger: TGTTGCAGTCATCCTCAACCAAGAAATCCGGGAGTT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CTATTTACTCGGGAGAGTTTGAAAAGTACTGGGCAGTTCAGAGAAACACATGGGAACTCCCGGATTTCTTaGTTGAGGATGACTGCAACA +
Preference number: 4 (lower is better)
Translates to: LFTRESLKSTGQFRETHGNSRIS*LRMTAT
Trigger: TGTTGCAGTCATCCTCAACCAAGAAATCCGGGAGTT...CCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTATCAAAATGCTACACGTaGTACTACTGTTTGCACAGT +
Preference number: 4 (lower is better)
Translates to: RQPFVRGNPRNASESHILSKCYT*YYCLHS
Trigger: ACTGTGCAAACAGTAGTACCACGTGTAGCATTTTGA...TAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGGCTGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATTTATGTGGCTTGTCTTaGGTTTTATTCTGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: DISQYLKRQPFVRGNPRNLCGLS*VLFCRG
Trigger: ACCCCGGCAGAATAAAACCCAAGACAAGCCACATAA...ATTCCTGGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTAGTCACTATCCTTACTaGAAACATGTTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFSHYPY*KHVRRR
Trigger: GCGGCGGCGAACATGTTTTCAGTAAGGATAGTGACT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GACTCGAAAGGTAAAGAGGGGAAAACGCTGATGAAGAACATGAAAGCTCACATTGTGCTCTGTCGATACTaGATGCCATCTGAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: DSKGKEGKTLMKNMKAHIVLCRY*MPSEKD
Trigger: ATCTTTCTCAGATGGCATTCAGTATCGACAGAGCAC...AATGTGAGCTTTCATGTTCTTCATCAGCGTTTTCCCCTCTTTACCTTTCGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATACTTTGAACACATGCTaGGCAGTGGAAGATGGATTG +
Preference number: 4 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHTLNTC*AVEDGL
Trigger: CAATCCATCTTCCACTGCTCAGCATGTGTTCAAAGT...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TCTCAGAGAGGTACAGCCAAATTTGAACTCATCATACTTTCCCAAGTTCTCCACACTTTGAACACATGCTaGGCAGTGGAAGATGGATTG +
Preference number: 4 (lower is better)
Translates to: SQRGTAKFELIILSQVLHTLNTC*AVEDGL
Trigger: CAATCCATCTTCCACTGCTCAGCATGTGTTCAAAGT...GTGGAGAACTTGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTCTCTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTTGGCTGGTGTACACTaGAGCATTTCAGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLAGVH*SISGDR
Trigger: TCTGTCTCCTGAAATGCTTCAGTGTACACCAGCCAA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGTCCATGAAAACAGGTaGCTCACTCAGTCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQVHENR*LTQSLG
Trigger: ACCCAAAGACTGAGTGAGTCACCTGTTTTCATGGAC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCGTATTCTCGTTAGGGTaGCGGTGCATATGTATAAAA +
Preference number: 4 (lower is better)
Translates to: SSDISQYLKRQPFVRGNPVFSLG*RCICIK
Trigger: TTTTATACATATGCACCGTCACCCTAACGAGAATAC...GGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACGTATTCTCGTTAGGGTaGCGGTGCATATGTATAAAA +
Preference number: 4 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHVFSLG*RCICIK
Trigger: TTTTATACATATGCACCGTCACCCTAACGAGAATAC...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGTGAGTTACAAAACTTaGCTCACTGTCTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCVSYKT*LTVFSL
Trigger: GAGACTGAAGACAGTGAGTCAAGTTTTGTAACTCAC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AGAAAGATAGCTTTCTGGCTGCTGTCCATAACCATCGTATGGCACATAGAGGTAGTGAGTTACAAAACTTaGCTCACTGTCTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: RKIAFWLLSITIVWHIEVVSYKT*LTVFSL
Trigger: GAGACTGAAGACAGTGAGTCAAGTTTTGTAACTCAC...TACCTCTATGTGCCATACGATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGAAGCAGAAAGGGGATaGTCTACAGCAGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKEAERG*STAEPI
Trigger: AATGGGCTCTGCTGTAGATCATCCCCTTTCTGCTTC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGAAGCAGAAAGGGGATaGTCTACAGCAGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFEAERG*STAEPI
Trigger: AATGGGCTCTGCTGTAGATCATCCCCTTTCTGCTTC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAATGCAAATCATCTCGTaGACTGGGGAATGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: NLFSILSSGTREIIRHKSMQIIS*TGECLQ
Trigger: TTGCAGACATTCCCCAGTTCACGAGATGATTTGCAT...TGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTAAGAATTACAAACAACTaGTGGATGCAAATCATCTCG +
Preference number: 4 (lower is better)
Translates to: RQPFVRGNPRNASESHILRITNN*WMQIIS
Trigger: CGAGATGATTTGCATCCATCAGTTGTTTGTAATTCT...TAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGGCTGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAAGTTTCACTGTGCTTTaGCTGTTCCGCTATGCACAC +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNESFTVL*LFRYAH
Trigger: GTGTGCATAGCGGAACAGTCAAAGCACAGTGAAACT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AAAGTGATTGGAAATCCAAAACGAGAACAGAGTTGCTATAGAAGCGGGATTCAGCATTTGGCTTTCCTCTaGAGCTGTATTTCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: KVIGNPKREQSCYRSGIQHLAFL*SCISRR
Trigger: TCTCCGGGAAATACAGCTTCAGAGGAAAGCCAAATG...CTGAATCCCGCTTCTATAGCAACTCTGTTCTCGTTTTGGATTTCCAATCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATCCCATGCTATTTGTTTaGTTGGACTTCTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: DISQYLKRQPFVRGNPRNPMLFV*LDFSRK
Trigger: CTTCCTTGAGAAGTCCAATCAAACAAATAGCATGGG...ATTCCTGGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TCTGATCAGCTGGGACAAACTGACTTCCAGAATAAAAGCTACAAAATCCAGTCTACCTTGAATCCAGTCTaGATTGTTTGGCTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SDQLGQTDFQNKSYKIQSTLNPV*IVWLWE
Trigger: CTCCCACAGCCAAACAATTCAGACTGGATTCAAGGT...AGACTGGATTTTGTAGCTTTTATTCTGGAAGTCAGTTTGTCCCAGCTGATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAACCTTGAATCCAGTCTaGATTGTTTGGCTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNETLNPV*IVWLWE
Trigger: CTCCCACAGCCAAACAATTCAGACTGGATTCAAGGT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCCTGGCCTTGGATTCTaGGTCATTGCTGAGAATGCT +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFPGLGF*VIAENA
Trigger: AGCATTCTCAGCAATGACTCAGAATCCAAGGCCAGG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACATCACTAGAGGCTCTTaGGGCTCACTGCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHITRGS*GSLQGL
Trigger: AAGCCCCTGCAGTGAGCCTCAAGAGCCTCTAGTGAT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAGATGGTCCATCAATCTaGGAAGTTTCTTTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: NLFSILSSGTREIIRHKSDGPSI*EVSFCG
Trigger: CCCACAGAAAGAAACTTCTCAGATTGATGGACCATC...TGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GACTCGAAAGGTAAAGAGGGGAAAACGCTGATGAAGAACATGAAAGCTCACATTGATGGTCCATCAATCTaGGAAGTTTCTTTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: DSKGKEGKTLMKNMKAHIDGPSI*EVSFCG
Trigger: CCCACAGAAAGAAACTTCTCAGATTGATGGACCATC...AATGTGAGCTTTCATGTTCTTCATCAGCGTTTTCCCCTCTTTACCTTTCGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCAGTGGAGTGTCAGATaGGATGCAGTAGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFQWSVR*DAVEQS
Trigger: GCTCTGTTCTACTGCATCTCATCTGACACTCCACTG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTTGACTTCTCCCCAGGAATGCATCTaGATCTCATATCCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: YFSTGCGDDSHCYLWLTSPQECI*ISYPSR
Trigger: TCTGCTAGGATATGAGATTCAGATGCATTCCTGGGG...AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAATCTGGGATCTTTGCTaGACACTAGGTGTCACAGGA +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEIWDLC*TLGVTG
Trigger: TCCTGTGACACCTAGTGTTCAGCAAAGATCCCAGAT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AAAGTGATTGGAAATCCAAAACGAGAACAGAGTTGCTATAGAAGCGGGATTCAGATCTGGGATCTTTGCTaGACACTAGGTGTCACAGGA +
Preference number: 4 (lower is better)
Translates to: KVIGNPKREQSCYRSGIQIWDLC*TLGVTG
Trigger: TCCTGTGACACCTAGTGTTCAGCAAAGATCCCAGAT...CTGAATCCCGCTTCTATAGCAACTCTGTTCTCGTTTTGGATTTCCAATCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCCTTGTAAGCCTTCATTaGCTGCTTCACCATAAATCT +
Preference number: 4 (lower is better)
Translates to: SSDISQYLKRQPFVRGNPLVSLH*LLHHKS
Trigger: AGATTTATGGTGAAGCAGTCAATGAAGGCTTACAAG...GGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGTCTCTCTGGCTTTGTaGACAATACTATCGCCAACC +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQVSLAL*TILSPT
Trigger: GGTTGGCGATAGTATTGTTCACAAAGCCAGAGAGAC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAATACTGGGTCCTTCTaGTCCAGTGTTTCATACATG +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCNTGSF*SSVSYM
Trigger: CATGTATGAAACACTGGATCAGAAGGACCCAGTATT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGGTAGTAAAATATTGTaGAATAGTGCCTTTCCGCCC +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCGSKIL*NSAFPP
Trigger: GGGCGGAAAGGCACTATTTCACAATATTTTACTACC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AAAGTGATTGGAAATCCAAAACGAGAACAGAGTTGCTATAGAAGCGGGATTCAGCTACAGATGCCATGCTaGGTTAGGTCATCACACACA +
Preference number: 4 (lower is better)
Translates to: KVIGNPKREQSCYRSGIQLQMPC*VRSSHT
Trigger: TGTGTGTGATGACCTAACTCAGCATGGCATCTGTAG...CTGAATCCCGCTTCTATAGCAACTCTGTTCTCGTTTTGGATTTCCAATCACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCGAAGTAACACGTCTTaGTACAGACAGTTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCRSNTS*YRQFKE
Trigger: TTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTCCTCGGTCCCAGGCTaGAGCTCTTGTTGCCATGAT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWSSVPG*SSCCHD
Trigger: ATCATGGCAACAAGAGCTGCAGCCTGGGACCGAGGA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTAATTACTTTTCCTTCTTaGTTTTCGGAACTTGACAGC +
Preference number: 4 (lower is better)
Translates to: RQPFVRGNPRNASESHILITFPS*FSELDS
Trigger: GCTGTCAAGTTCCGAAAAGCAAGAAGGAAAAGTAAT...TAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGGCTGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GACTCGAAAGGTAAAGAGGGGAAAACGCTGATGAAGAACATGAAAGCTCACATTAATGGGATATTTGGTTaGAGGGGAGTCGGGAACTTT +
Preference number: 4 (lower is better)
Translates to: DSKGKEGKTLMKNMKAHINGIFG*RGVGNF
Trigger: AAAGTTCCCGACTCCCCTGCAACCAAATATCCCATT...AATGTGAGCTTTCATGTTCTTCATCAGCGTTTTCCCCTCTTTACCTTTCGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp TTAGGCATTTGGCTTTCCTCTGAAGCTGTATTTCCCGGAGAACAAGTTTCACTGGGCGACGATTCTCATTaGTATCTATGGTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: LGIWLSSEAVFPGEQVSLGDDSH*YLWLTS
Trigger: AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCC...CAGTGAAACTTGTTCTCCGGGAAATACAGCTTCAGAGGAAAGCCAAATGCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGGCGACGATTCTCATTaGTATCTATGGTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCGDDSH*YLWLTS
Trigger: AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCTCAGCCAGATCATTTaGAAGTCGAGTTTCTACCAT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCLSQII*KSSFYH
Trigger: ATGGTAGAAACTCGACTTGCAAATGATCTGGCTGAG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGGGGATATTGGTTGTTaGCAAGGGGGAATTACTGGA +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEGDIGC*QGGITG
Trigger: TCCAGTAATTCCCCCTTGGCAACAACCAATATCCCC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTTGACTTCTGGGGATATTGGTTGTTaGCAAGGGGGAATTACTGGA +
Preference number: 4 (lower is better)
Translates to: YFSTGCGDDSHCYLWLTSGDIGC*QGGITG
Trigger: TCCAGTAATTCCCCCTTGGCAACAACCAATATCCCC...AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp TCATTGATTCCACACGGTACTGTGAACCCCTTGTCAGTACATGTAAAAACTGAAGGGGATATTGGTTGTTaGCAAGGGGGAATTACTGGA +
Preference number: 4 (lower is better)
Translates to: SLIPHGTVNPLSVHVKTEGDIGC*QGGITG
Trigger: TCCAGTAATTCCCCCTTGGCAACAACCAATATCCCC...TTCAGTTTTTACATGTACTGACAAGGGGTTCACAGTACCGTGTGGAATCAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCGTCTAGTTCGAGCATaGAACTCCACACTGATTAGG +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQRLVRA*NSTLIR
Trigger: CCTAATCAGTGTGGAGTTGCATGCTCGAACTAGACG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATCCAATCTTAAAAGACTaGTCCTTAGTGGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: DISQYLKRQPFVRGNPRNPILKD*SLVAPF
Trigger: GAAAGGAGCCACTAAGGAGCAGTCTTTTAAGATTGG...ATTCCTGGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp ACCCGAGAGATCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGGACATTTACTACAGATaGCATGCTGAGTTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: TREIIRHKSILKAAALCKDIYYR*HAELGH
Trigger: ATGACCTAACTCAGCATGGCATCTGTAGTAAATGTC...CTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGATCTCTCGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTGGTTGAGGATGACTaGAACATGCTGAGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNELVEDD*NMLRLA
Trigger: AGCCAACCTCAGCATGTTGCAGTCATCCTCAACCAA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTTGGTTGAGGATGACTaGAACATGCTGAGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLVEDD*NMLRLA
Trigger: AGCCAACCTCAGCATGTTGCAGTCATCCTCAACCAA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATAGAAAGATAGCTTTCTaGCTGCTGTCCATAACCATC +
Preference number: 4 (lower is better)
Translates to: DISQYLKRQPFVRGNPRNRKIAF*LLSITI
Trigger: GATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCT...ATTCCTGGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CCCTTAAAAAGCATTGCCTCTTTTTCTGCAGCAGCCATGATTTCTTCAGCTCTTTTTCATCTTCCCATATaGCCTGTAGACCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: PLKSIASFSAAAMISSALFHLPI*PVDQGF
Trigger: GAAACCCTGGTCTACAGGCCATATGGGAAGATGAAA...AAGAGCTGAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATGCTTTTTAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CCAATGAAGGCAGCTCCTCTACTGGTGATGAGGGTCTATCATCTCCATTTAATGTCAGTTGAACTTCTGTaGGTATTTCTGCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: PMKAAPLLVMRVYHLHLMSVELL*VFLHSD
Trigger: ATCACTGTGCAGAAATACCCACAGAAGTTCAACTGA...CATTAAATGGAGATGATAGACCCTCATCACCAGTAGAGGAGCTGCCTTCATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCTTCACAGGAAGATACTaGGAGGATCTCTTTCTTACT +
Preference number: 4 (lower is better)
Translates to: SSDISQYLKRQPFVRGNPFTGRY*EDLFLT
Trigger: AGTAAGAAAGAGATCCTCCCAGTATCTTCCTGTGAA...GGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCTTGCTGGCTGAGGCTTaGCTTTTCTGTTTTATGTTC +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCLLAEA*LFCFMF
Trigger: GAACATAAAACAGAAAAGCCAAGCCTCAGCCAGCAA...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGGAGTCGGGAACTTTTaGCCAAAAGTCCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEGVGNF*PKVLQR
Trigger: CCTTTGAAGGACTTTTGGCCAAAAGTTCCCGACTCC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAAGACCAGCAGCGAGGTaGAGAAGAATTTATGGGACT +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNERPAAR*RRIYGT
Trigger: AGTCCCATAAATTCTTCTCCACCTCGCTGCTGGTCT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGAGACCAGCAGCGAGGTaGAGAAGAATTTATGGGACT +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQRPAAR*RRIYGT
Trigger: AGTCCCATAAATTCTTCTCCACCTCGCTGCTGGTCT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGATTTCTTCAGCTCTTaGATCTGTGGGAGACCAGCA +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQDFFSS*ICGRPA
Trigger: TGCTGGTCTCCCACAGATCCAAGAGCTGAAGAAATC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAAGTTCGAGGTTTTCTTaGGGACGTTACCGATCGTGT +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNESSRFS*GRYRSC
Trigger: ACACGATCGGTAACGTCCCCAAGAAAACCTCGAACT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCAAATTCTGATCAGCTaGGACAAACTGACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCQILIS*DKLTSR
Trigger: TCTGGAAGTCAGTTTGTCCCAGCTGATCAGAATTTG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGGTCCACCAATCTCCCTaGGCTTTTCTGGTACATCAG +
Preference number: 4 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQVHQSP*AFLVHQ
Trigger: CTGATGTACCAGAAAAGCCCAGGGAGATTGGTGGAC...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGTCCACCAATCTCCCTaGGCTTTTCTGGTACATCAG +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKVHQSP*AFLVHQ
Trigger: CTGATGTACCAGAAAAGCCCAGGGAGATTGGTGGAC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTTATTGACAACTCCTTaGCCACTGCGAAGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFLLTTP*PLRRGD
Trigger: GTCACCCCTTCGCAGTGGCCAAGGAGTTGTCAATAA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCAGTGGGGAGTATACATaGACTTACATCCATTTTTGG +
Preference number: 4 (lower is better)
Translates to: SSDISQYLKRQPFVRGNPSGEYT*TYIHFW
Trigger: CCAAAAATGGATGTAAGTCCATGTATACTCCCCACT...GGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCTTTGACTACATCCCGTaGTTGGTGCTTGTAAAGCAA +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCFDYIP*LVLVKQ
Trigger: TTGCTTTACAAGCACCAACCACGGGATGTAGTCAAA...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATGCAGAGGCAACTGGTaGCAGCATCTGACTTTCACT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKCRGNW*QHLTFT
Trigger: AGTGAAAGTCAGATGCTGCCACCAGTTGCCTCTGCA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCCAAGGGGGAATTACTaGAGAATCAGGGGAGCTATA +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQPRGNY*RIRGAI
Trigger: TATAGCTCCCCTGATTCTCCAGTAATTCCCCCTTGG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCTCAATTTTGTCATCTaGCACCCGAGAGATCATCCG +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLNFVI*HPRDHP
Trigger: CGGATGATCTCTCGGGTGCCAGATGACAAAATTGAG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACTCAATTTTGTCATCTaGCACCCGAGAGATCATCCG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNELNFVI*HPRDHP
Trigger: CGGATGATCTCTCGGGTGCCAGATGACAAAATTGAG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACCCAAGTTCTCCACATaGCCAAGGCAGGTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTPKFST*PRQVEK
Trigger: CTTTTCCACCTGCCTTGGCCATGTGGAGAACTTGGG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAAAGATAGCTTTCTGGCTGCTGTCCATAACCATCGTATGGCACATAGAGGTAGCCAACCTCAATGCATaGCATTCTCCCAGAAAAATT +
Preference number: 4 (lower is better)
Translates to: RKIAFWLLSITIVWHIEVANLNA*HSPRKI
Trigger: AATTTTTCTGGGAGAATGCCATGCATTGAGGTTGGC...TACCTCTATGTGCCATACGATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACGTTCCAAGGTCTCTCTaGCTTTGTGAACAATACTAT +
Preference number: 4 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHVPRSL*LCEQYY
Trigger: ATAGTATTGTTCACAAAGCCAGAGAGACCTTGGAAC...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTGTAAGTTCAAGGGCTaGCACACAAGCTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQCKFKG*HTSSWF
Trigger: AAACCAGGAGCTTGTGTGCCAGCCCTTGAACTTACA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAATAAATGATGACGTATaGCACTCGCTCCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEINDDV*HSLPNL
Trigger: CAGGTTGGGGAGCGAGTGCCATACGTCATCATTTAT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCTGCAGGACTTCCACTaGGCGCCTTACAAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWLQDFH*APYKLD
Trigger: ATCCAGCTTGTAAGGCGCCCAGTGGAAGTCCTGCAG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAAAGATAGCTTTCTGGCTGCTGTCCATAACCATCGTATGGCACATAGAGGTAGATTCTTGCCAAGGGTaGAAGGATTTGCTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: RKIAFWLLSITIVWHIEVDSCQG*KDLLGN
Trigger: ATTACCAAGCAAATCCTTCCACCCTTGGCAAGAATC...TACCTCTATGTGCCATACGATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGATTCTTGCCAAGGGTaGAAGGATTTGCTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCDSCQG*KDLLGN
Trigger: ATTACCAAGCAAATCCTTCCACCCTTGGCAAGAATC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGTTCAGAGAAACACATaGGATGTGTCGATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCVQRNT*DVSIKA
Trigger: TGCTTTGATCGACACATCCCATGTGTTTCTCTGAAC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GACATAAGTGGTTTCAGAATGTTAGCAGTTCGAGGGGTGAAGCTGCCATTTTTAAGATGGTACACATACTaGAGCAAATCCAACACCTGC +
Preference number: 4 (lower is better)
Translates to: DISGFRMLAVRGVKLPFLRWYTY*SKSNTC
Trigger: GCAGGTGTTGGATTTGCTCCAGTATGTGTACCATCT...TAAAAATGGCAGCTTCACCCCTCGAACTGCTAACATTCTGAAACCACTTATGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TCTCAGAGAGGTACAGCCAAATTTGAACTCATCATACTTTCCCAAGTTCTCCACTTATGTGGCTTGTCTTaGGTTTTATTCTGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: SQRGTAKFELIILSQVLHLCGLS*VLFCRG
Trigger: ACCCCGGCAGAATAAAACCCAAGACAAGCCACATAA...GTGGAGAACTTGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTCTCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 72 bp AAATCTGGAGGTACTCTCAGAGAGGTACAGCCAAATTaGAACTCATCATACTTTCCCAAGTTCTCCACATGG +
Preference number: 4 (lower is better)
Translates to: KSGGTLREVQPN*NSSYFPKFSTW
Trigger: CCATGTGGAGAACTTGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTCTCTGAGAGTACCTCCAGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 72 bp TGTACAGTTCTTGCATATCTTTACAAGTTGCTCCTGTaGACGTTCCAACTCCCGGATTTCTTGGTTGAGGAT +
Preference number: 4 (lower is better)
Translates to: CTVLAYLYKLLL*TFQLPDFLVED
Trigger: ATCCTCAACCAAGAAATCCGGGAGTTGGAACGTCAACAGGAGCAACTTGTAAAGATATGCAAGAACTGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGTGCTCTGTCGATACTaGATGCCATCTGAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQVLCRY*MPSEKD
Trigger: ATCTTTCTCAGATGGCATTCAGTATCGACAGAGCAC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CTATTTACTCGGGAGAGTTTGAAAAGTACTGGGCAGTTCAGAGAAACACATGGGTTGCTTTTCGGAACTTaGCAGCAGCCAGATTTATTA +
Preference number: 4 (lower is better)
Translates to: LFTRESLKSTGQFRETHGLLFGT*QQPDLL
Trigger: TAATAAATCTGGCTGCTGTCAAGTTCCGAAAAGCAA...CCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AAAGTGATTGGAAATCCAAAACGAGAACAGAGTTGCTATAGAAGCGGGATTCAGAAAGGAGCGACATGGTaGTGGCATCCTATTTCTTTC +
Preference number: 4 (lower is better)
Translates to: KVIGNPKREQSCYRSGIQKGATW*WHPISF
Trigger: GAAAGAAATAGGATGCCATCACCATGTCGCTCCTTT...CTGAATCCCGCTTCTATAGCAACTCTGTTCTCGTTTTGGATTTCCAATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGAAAGGAGCGACATGGTaGTGGCATCCTATTTCTTTC +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQKGATW*WHPISF
Trigger: GAAAGAAATAGGATGCCATCACCATGTCGCTCCTTT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CCCTTAAAAAGCATTGCCTCTTTTTCTGCAGCAGCCATGATTTCTTCAGCTCTTGGTATTTCTGCACAGTaGTCTCTTTTTGGCACAATG +
Preference number: 4 (lower is better)
Translates to: PLKSIASFSAAAMISSALGISAQ*SLFGTM
Trigger: CATTGTGCCAAAAAGAGATCACTGTGCAGAAATACC...AAGAGCTGAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATGCTTTTTAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TTTGGCTGTGGGAGGCTAAGAAACACTTCTTTGCTTACTGAACTCCTATTCAATGCAGTTCCATCTAACTaGGGTATAGAAAGACTGGCT +
Preference number: 4 (lower is better)
Translates to: FGCGRLRNTSLLTELLFNAVPSN*GIERLA
Trigger: AGCCAGTCTTTCTATACCTCAGTTAGATGGAACTGC...ATTGAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAGCCTCCCACAGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCCAATTTCCATGGGATaGGGTAGACTAATTTTTGAG +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCPISMG*GRLIFE
Trigger: CTCAAAAATTAGTCTACCTCATCCCATGGAAATTGG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CCAATGAAGGCAGCTCCTCTACTGGTGATGAGGGTCTATCATCTCCATTTAATGTTCGTTTTCGGGATTTaGGAGTTCCATCTAAACTTT +
Preference number: 4 (lower is better)
Translates to: PMKAAPLLVMRVYHLHLMFVFGI*EFHLNF
Trigger: AAAGTTTAGATGGAACTCTCAAATCCCGAAAACGAA...CATTAAATGGAGATGATAGACCCTCATCACCAGTAGAGGAGCTGCCTTCATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGAGCATTGTAAGATGGTaGGGGAGGAGAAAGAATAGC +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQSIVRW*GRRKNS
Trigger: GCTATTCTTTCTCCTCCCTCACCATCTTACAATGCT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGAAGCAGAAAGGGGATaGTCTACAGCAGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTEAERG*STAEPI
Trigger: AATGGGCTCTGCTGTAGATCATCCCCTTTCTGCTTC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACACACAATCTGCTGCTaGCTGTCTTTGCAATGCAAA +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEHTICC*LSLQCK
Trigger: TTTGCATTGCAAAGACAGTCAGCAGCAGATTGTGTG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATAAGTTTCACTGTGCTTTaGCTGTTCCGCTATGCACAC +
Preference number: 4 (lower is better)
Translates to: LCSCATSFSYTRINSLLISFTVL*LFRYAH
Trigger: GTGTGCATAGCGGAACAGTCAAAGCACAGTGAAACT...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TGTTTCTTGAAACATACAGTTCTAAATCTTCACAGGCCACGTCTACAAGTTCACCATTTGGCTTTCCTCTaGAGCTGTATTTCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: CFLKHTVLNLHRPRLQVHHLAFL*SCISRR
Trigger: TCTCCGGGAAATACAGCTTCAGAGGAAAGCCAAATG...GTGAACTTGTAGACGTGGCCTGTGAAGATTTAGAACTGTATGTTTCAAGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAACATTTGGCTTTCCTCTaGAGCTGTATTTCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKHLAFL*SCISRR
Trigger: TCTCCGGGAAATACAGCTTCAGAGGAAAGCCAAATG...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TCTGATCAGCTGGGACAAACTGACTTCCAGAATAAAAGCTACAAAATCCAGTCTGCTGAGTCTGTGGTATaGTGCTTGTCTTCATCACAT +
Preference number: 4 (lower is better)
Translates to: SDQLGQTDFQNKSYKIQSAESVV*CLSSSH
Trigger: ATGTGATGAAGACAAGCATCATACCACAGACTCAGC...AGACTGGATTTTGTAGCTTTTATTCTGGAAGTCAGTTTGTCCCAGCTGATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGCTGAGTCTGTGGTATaGTGCTTGTCTTCATCACAT +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQAESVV*CLSSSH
Trigger: ATGTGATGAAGACAAGCATCATACCACAGACTCAGC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAACCTTGAATCCAGTCTaGATTGTTTGGCTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKTLNPV*IVWLWE
Trigger: CTCCCACAGCCAAACAATTCAGACTGGATTCAAGGT...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTTGACTTCTAAAAGAGGTATTGGCTaGGTCAAGAGACTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: YFSTGCGDDSHCYLWLTSKRGIG*VKRLSH
Trigger: ATGGGACAGTCTCTTGACTCAGCCAATACCTCTTTT...AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGCCATTTTTAGATTGTaGAGGAGAGCTAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCAIFRL*RRASRS
Trigger: AGATCTACTAGCTCTCCTTCACAATCTAAAAATGGC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TCTGATCAGCTGGGACAAACTGACTTCCAGAATAAAAGCTACAAAATCCAGTCTGTCTCAGACAGGTCATaGTCCAACAAAGTTGCCATA +
Preference number: 4 (lower is better)
Translates to: SDQLGQTDFQNKSYKIQSVSDRS*SNKVAI
Trigger: TATGGCAACTTTGTTGGATCATGACCTGTCTGAGAC...AGACTGGATTTTGTAGCTTTTATTCTGGAAGTCAGTTTGTCCCAGCTGATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGTCGAGTTTCTACCATaGGGAGCCGTCCACCAATCT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHVEFLP*GAVHQS
Trigger: AGATTGGTGGACGGCTCCTCATGGTAGAAACTCGAC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATCTTAGGGCTATTACTTaGCCCTTTATTGACAACTCC +
Preference number: 4 (lower is better)
Translates to: SNLRIINILLGMCCSGEYLRAIT*PFIDNS
Trigger: GGAGTTGTCAATAAAGGGTCAAGTAATAGCCCTAAG...ATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGTCATCTGGGTTAACTaGAGAGCTAAAGTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQVIWVN*RAKVLS
Trigger: GCTGAGAACTTTAGCTCTTCAGTTAACCCAGATGAC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCTTTCACTTGCAGTTTaGCTACATCCCGTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFLSLAV*LHPVVG
Trigger: ACCAACCACGGGATGTAGTCAAACTGCAAGTGAAAG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp ACCCGAGAGATCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGACTATGAAAGCAAAGTaGTTCACATTTCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: TREIIRHKSILKAAALCKTMKAK*FTFPSS
Trigger: AGAACTGGGAAATGTGAATCACTTTGCTTTCATAGT...CTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGATCTCTCGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGATGGTCCATCAATCTaGGAAGTTTCTTTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQDGPSI*EVSFCG
Trigger: CCCACAGAAAGAAACTTCTCAGATTGATGGACCATC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGTTATCAAACCAGTCTaGCAAGACTCGAAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCVIKPV*QDSKGK
Trigger: TTTACCTTTCGAGTCTTGTCAGACTGGTTTGATAAC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAATCTGGGATCTTTGCTaGACACTAGGTGTCACAGGA +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKIWDLC*TLGVTG
Trigger: TCCTGTGACACCTAGTGTTCAGCAAAGATCCCAGAT...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAGGTACAGCCAAATTTaGACTCATCATACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCRYSQI*THHTFP
Trigger: TGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AGAAAGATAGCTTTCTGGCTGCTGTCCATAACCATCGTATGGCACATAGAGGTAAGGTACAGCCAAATTTaGACTCATCATACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: RKIAFWLLSITIVWHIEVRYSQI*THHTFP
Trigger: TGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCT...TACCTCTATGTGCCATACGATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CTATTTACTCGGGAGAGTTTGAAAAGTACTGGGCAGTTCAGAGAAACACATGGGAGGTACAGCCAAATTTaGACTCATCATACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: LFTRESLKSTGQFRETHGRYSQI*THHTFP
Trigger: TGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCT...CCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AGAAAGATAGCTTTCTGGCTGCTGTCCATAACCATCGTATGGCACATAGAGGTATACACCTTTTCTTACTaGAGGCTTGACAAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: RKIAFWLLSITIVWHIEVYTFSY*RLDKSY
Trigger: GTAGCTTTTGTCAAGCCTTCAGTAAGAAAAGGTGTA...TACCTCTATGTGCCATACGATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGTCTCTCTGGCTTTGTaGACAATACTATCGCCAACC +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFVSLAL*TILSPT
Trigger: GGTTGGCGATAGTATTGTTCACAAAGCCAGAGAGAC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGCTTCGGCAATTTCCTaGCCAATCTTAAAAGACTGC +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEASAIS*PILKDC
Trigger: GCAGTCTTTTAAGATTGGTCAGGAAATTGCCGAAGC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TCATTGATTCCACACGGTACTGTGAACCCCTTGTCAGTACATGTAAAAACTGAAGCTTCGGCAATTTCCTaGCCAATCTTAAAAGACTGC +
Preference number: 4 (lower is better)
Translates to: SLIPHGTVNPLSVHVKTEASAIS*PILKDC
Trigger: GCAGTCTTTTAAGATTGGTCAGGAAATTGCCGAAGC...TTCAGTTTTTACATGTACTGACAAGGGGTTCACAGTACCGTGTGGAATCAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGCTTCGGCAATTTCCTaGCCAATCTTAAAAGACTGC +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQASAIS*PILKDC
Trigger: GCAGTCTTTTAAGATTGGTCAGGAAATTGCCGAAGC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAATACGGCAGGAATCTCTTCTaGCTGTTTCTATTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: CSQFCHLAPERSSDISQYGRNLF*LFLFLL
Trigger: CAAAAGGAATAGAAACAGTCAGAAGAGATTCCTGCC...GTATTGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCATCAATACCAATAAGTaGGAAGATTCTTGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCINTNK*EDSCQG
Trigger: CCCTTGGCAAGAATCTTCTCACTTATTGGTATTGAT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CTATTTACTCGGGAGAGTTTGAAAAGTACTGGGCAGTTCAGAGAAACACATGGGATCAATACCAATAAGTaGGAAGATTCTTGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LFTRESLKSTGQFRETHGINTNK*EDSCQG
Trigger: CCCTTGGCAAGAATCTTCTCACTTATTGGTATTGAT...CCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GACTCGAAAGGTAAAGAGGGGAAAACGCTGATGAAGAACATGAAAGCTCACATTGGTAGTAAAATATTGTaGAATAGTGCCTTTCCGCCC +
Preference number: 4 (lower is better)
Translates to: DSKGKEGKTLMKNMKAHIGSKIL*NSAFPP
Trigger: GGGCGGAAAGGCACTATTTCACAATATTTTACTACC...AATGTGAGCTTTCATGTTCTTCATCAGCGTTTTCCCCTCTTTACCTTTCGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTAGCAGAAACATCCTTGACTCGATaGAAGTTAAAAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: PFVRGNPRNASESHILAETSLTR*KLKSTM
Trigger: CATGGTGCTTTTTAACTTTCATCGAGTCAAGGATGT...TTCTGCTAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCTCTGTCGATACTGAATaGCATCTGAGAAAGATAGCT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCSVDTE*HLRKIA
Trigger: AGCTATCTTTCTCAGATGGCATTCAGTATCGACAGA...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGACAGAACCTCAGAGTaGAATGTTAACTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEDRTSE*NVNSAE
Trigger: CTCTGCTGAGTTAACATTGCACTCTGAGGTTCTGTC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAATGTTCTTCAATATTaGTGTCCCATCTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCNVLQY*CPISGT
Trigger: TGTCCCAGAGATGGGACAGCAATATTGAAGAACATT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACCTGAATGAACAGTACTaGTTAAAGATCCAGGGTATT +
Preference number: 4 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHLNEQY*LKIQGI
Trigger: AATACCCTGGATCTTTAAGCAGTACTGTTCATTCAG...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCTATAGTCCAAAGGACTaGTCAGTTTCTAACGTTCCA +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCYSPKD*SVSNVP
Trigger: TGGAACGTTAGAAACTGAGCAGTCCTTTGGACTATA...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAATACCATTGCCTCTTTTTCTaGAGCAGCCATGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: CSQFCHLAPERSSDISQYHCLFF*SSHDFF
Trigger: GAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATG...GTATTGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATCAAACAACTGATGGATaGAAATCATCTCGTGAACTG +
Preference number: 4 (lower is better)
Translates to: DISQYLKRQPFVRGNPRNQTTDG*KSSREL
Trigger: CAGTTCACGAGATGATTTGCATCCATCAGTTGTTTG...ATTCCTGGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCAAACAACTGATGGATaGAAATCATCTCGTGAACTG +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCQTTDG*KSSREL
Trigger: CAGTTCACGAGATGATTTGCATCCATCAGTTGTTTG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGCGACGATTCTCATTGCTATCTATGGTTGACTTCTCAAAAATTTCAGGACTTATTGACTGTTCCGCTATaGACACAATCTGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: GDDSHCYLWLTSQKFQDLLTVPL*TQSAAD
Trigger: GTCAGCAGCAGATTGTGTGCATAGCGGAACAGTCAA...TAAGTCCTGAAATTTTTGAGAAGTCAACCATAGATAGCAATGAGAATCGTCGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAGAACAAGTTTCACTGTaGTTTGACTGTTCCGCTATG +
Preference number: 4 (lower is better)
Translates to: NLFSILSSGTREIIRHKSEQVSL*FDCSAM
Trigger: CATAGCGGAACAGTCAAAGCACAGTGAAACTTGTTC...TGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGAGGGGAGGAGAGTATTaGAGTAAAAGAGGTATTGGC +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQRGGEY*SKRGIG
Trigger: GCCAATACCTCTTTTACTGCAATACTCTCCTCCCCT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAAGGGGAGGAGAGTATTaGAGTAAAAGAGGTATTGGC +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNERGGEY*SKRGIG
Trigger: GCCAATACCTCTTTTACTGCAATACTCTCCTCCCCT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CCCTTAAAAAGCATTGCCTCTTTTTCTGCAGCAGCCATGATTTCTTCAGCTCTTCATCTGACTTTCACTTaGAGTTTGACTACATCCCGT +
Preference number: 4 (lower is better)
Translates to: PLKSIASFSAAAMISSALHLTFT*SLTTSR
Trigger: ACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATG...AAGAGCTGAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATGCTTTTTAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGCGTCTAGTTCGAGCATaGAACTCCACACTGATTAGG +
Preference number: 4 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQRLVRA*NSTLIR
Trigger: CCTAATCAGTGTGGAGTTGCATGCTCGAACTAGACG...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCGTCTAGTTCGAGCATaGAACTCCACACTGATTAGG +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFRLVRA*NSTLIR
Trigger: CCTAATCAGTGTGGAGTTGCATGCTCGAACTAGACG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTATCGCCAACCTCAATaGATGGCATTCTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQYRQPQ*MAFSQK
Trigger: TTTCTGGGAGAATGCCATGCATTGAGGTTGGCGATA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATATCGCCAACCTCAATaGATGGCATTCTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEYRQPQ*MAFSQK
Trigger: TTTCTGGGAGAATGCCATGCATTGAGGTTGGCGATA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATTGGTTGAGGATGACTaGAACATGCTGAGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKLVEDD*NMLRLA
Trigger: AGCCAACCTCAGCATGTTGCAGTCATCCTCAACCAA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TCTGATCAGCTGGGACAAACTGACTTCCAGAATAAAAGCTACAAAATCCAGTCTCTGCCGGAGATATGGTaGCTTGGACAATTCTCTATT +
Preference number: 4 (lower is better)
Translates to: SDQLGQTDFQNKSYKIQSLPEIW*LGQFSI
Trigger: AATAGAGAATTGTCCAAGGCACCATATCTCCGGCAG...AGACTGGATTTTGTAGCTTTTATTCTGGAAGTCAGTTTGTCCCAGCTGATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGAACTGGTCTAATAACTaGCGGAGATATGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQNWSNN*RRYGAL
Trigger: CAAGGCACCATATCTCCGGCAGTTATTAGACCAGTT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TCTGATCAGCTGGGACAAACTGACTTCCAGAATAAAAGCTACAAAATCCAGTCTAACTGGTCTAATAACTaGCGGAGATATGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: SDQLGQTDFQNKSYKIQSNWSNN*RRYGAL
Trigger: CAAGGCACCATATCTCCGGCAGTTATTAGACCAGTT...AGACTGGATTTTGTAGCTTTTATTCTGGAAGTCAGTTTGTCCCAGCTGATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAAGAAAGATAGCTTTCTaGCTGCTGTCCATAACCATC +
Preference number: 4 (lower is better)
Translates to: NLFSILSSGTREIIRHKSRKIAF*LLSITI
Trigger: GATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCT...TGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TTAAAAGACTGCTCCTTAGTGGCTCCTTTCAGTAGCACAAACATACTGTCAGTAACACATGCTGAGCAGTaGAAGATGGATTGCCTAAAG +
Preference number: 4 (lower is better)
Translates to: LKDCSLVAPFSSTNILSVTHAEQ*KMDCLK
Trigger: CTTTAGGCAATCCATCTTCCACTGCTCAGCATGTGT...TACTGACAGTATGTTTGTGCTACTGAAAGGAGCCACTAAGGAGCAGTCTTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATTTGCTGGCTGAGGCTTaGCTTTTCTGTTTTATGTTC +
Preference number: 4 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHLLAEA*LFCFMF
Trigger: GAACATAAAACAGAAAAGCCAAGCCTCAGCCAGCAA...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGATAAATGGGATATTTaGTTGCAGGGGAGTCGGGAA +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEDKWDI*LQGSRE
Trigger: TTCCCGACTCCCCTGCAACCAAATATCCCATTTATC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAATCATCTCGTGAACTaGGGAATGTCTGCAAATCTA +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCNHLVN*GMSANL
Trigger: TAGATTTGCAGACATTCCCCAGTTCACGAGATGATT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGAGTTCGAGGTTTTCTTaGGGACGTTACCGATCGTGT +
Preference number: 4 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQSSRFS*GRYRSC
Trigger: ACACGATCGGTAACGTCCCCAAGAAAACCTCGAACT...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CCCTTAAAAAGCATTGCCTCTTTTTCTGCAGCAGCCATGATTTCTTCAGCTCTTCAAATTCTGATCAGCTaGGACAAACTGACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PLKSIASFSAAAMISSALQILIS*DKLTSR
Trigger: TCTGGAAGTCAGTTTGTCCCAGCTGATCAGAATTTG...AAGAGCTGAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATGCTTTTTAAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CTATTTACTCGGGAGAGTTTGAAAAGTACTGGGCAGTTCAGAGAAACACATGGGTTCTATAGCTTGTCCTaGAAAAAGATCCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: LFTRESLKSTGQFRETHGFYSLS*KKILNS
Trigger: GCTGTTCAGGATCTTTTTCCAGGACAAGCTATAGAA...CCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AGAAAGATAGCTTTCTGGCTGCTGTCCATAACCATCGTATGGCACATAGAGGTATTCTATAGCTTGTCCTaGAAAAAGATCCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: RKIAFWLLSITIVWHIEVFYSLS*KKILNS
Trigger: GCTGTTCAGGATCTTTTTCCAGGACAAGCTATAGAA...TACCTCTATGTGCCATACGATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAATAATGAGGCTGAGTCTGTaGTATGATGCTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LFSILSSGTREIIRHKSIMRLSL*YDACLH
Trigger: ATGAAGACAAGCATCATACCACAGACTCAGCCTCAT...TATTGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATTTTTTCCACTGGTTGTaGCGACGATTCTCATTGCTA +
Preference number: 4 (lower is better)
Translates to: SNLRIINILLGMCCSGEYFFHWL*RRFSLL
Trigger: TAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAA...ATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTAACCAGTTGTCGACTTaGGGCACATTTGCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFNQLST*GTFARH
Trigger: ATGCCTTGCAAATGTGCCCCAAGTCGACAACTGGTT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGTTCGTATTCTTCTTTaGCTTGAAGCCACACTTGAA +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCVRILL*LEATLE
Trigger: TTCAAGTGTGGCTTCAAGCCAAAGAAGAATACGAAC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTATCATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTGGCGTTCGTATTCTTCTTTaGCTTGAAGCCACACTTGAA +
Preference number: 4 (lower is better)
Translates to: LSSSSSSFSGSLAEATGGVRILL*LEATLE
Trigger: TTCAAGTGTGGCTTCAAGCCAAAGAAGAATACGAAC...GCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCACTTACATCCATTTTTaGAGGCACTACAGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCTYIHF*RHYRFV
Trigger: GACAAACCTGTAGTGCCTCCAAAAATGGATGTAAGT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAGTGGGGAGTATACATaGACTTACATCCATTTTTGG +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCSGEYT*TYIHFW
Trigger: CCAAAAATGGATGTAAGTCCATGTATACTCCCCACT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GACTCGAAAGGTAAAGAGGGGAAAACGCTGATGAAGAACATGAAAGCTCACATTTTTGACTACATCCCGTaGTTGGTGCTTGTAAAGCAA +
Preference number: 4 (lower is better)
Translates to: DSKGKEGKTLMKNMKAHIFDYIP*LVLVKQ
Trigger: TTGCTTTACAAGCACCAACCACGGGATGTAGTCAAA...AATGTGAGCTTTCATGTTCTTCATCAGCGTTTTCCCCTCTTTACCTTTCGAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTTGCAGAGGCAACTGGTaGCAGCATCTGACTTTCACT +
Preference number: 4 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSCRGNW*QHLTFT
Trigger: AGTGAAAGTCAGATGCTGCCACCAGTTGCCTCTGCA...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACATGCAGAGGCAACTGGTaGCAGCATCTGACTTTCACT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTCRGNW*QHLTFT
Trigger: AGTGAAAGTCAGATGCTGCCACCAGTTGCCTCTGCA...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TGTTTCTTGAAACATACAGTTCTAAATCTTCACAGGCCACGTCTACAAGTTCACCCAAGGGGGAATTACTaGAGAATCAGGGGAGCTATA +
Preference number: 4 (lower is better)
Translates to: CFLKHTVLNLHRPRLQVHPRGNY*RIRGAI
Trigger: TATAGCTCCCCTGATTCTCCAGTAATTCCCCCTTGG...GTGAACTTGTAGACGTGGCCTGTGAAGATTTAGAACTGTATGTTTCAAGAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGGAATCTGGGGATATTaGTTGTTGCCAAGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFGIWGY*LLPRGN
Trigger: ATTCCCCCTTGGCAACAACCAATATCCCCAGATTCC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAAGCTGTTCTAACATTTaGAGATTTCCACGGACACGG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNESCSNI*RFPRTR
Trigger: CCGTGTCCGTGGAAATCTCCAAATGTTAGAACAGCT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGTTCCAAGGTCTCTCTaGCTTTGTGAACAATACTAT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCVPRSL*LCEQYY
Trigger: ATAGTATTGTTCACAAAGCCAGAGAGACCTTGGAAC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCTTTTGCATCAAATACTaGGTCCTTCTGATCCAGTGT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCFCIKY*VLLIQC
Trigger: ACACTGGATCAGAAGGACCCAGTATTTGATGCAAAA...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCTGGCACACAAGCTCCTaGTTTATAAGAAAAACTTCC +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCWHTSS*FIRKTS
Trigger: GGAAGTTTTTCTTATAAACCAGGAGCTTGTGTGCCA...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTAGGCATTTGGCTTTCCTCTGAAGCTGTATTTCCCGGAGAACAAGTTTCACTGTGGCACACAAGCTCCTaGTTTATAAGAAAAACTTCC +
Preference number: 4 (lower is better)
Translates to: LGIWLSSEAVFPGEQVSLWHTSS*FIRKTS
Trigger: GGAAGTTTTTCTTATAAACCAGGAGCTTGTGTGCCA...CAGTGAAACTTGTTCTCCGGGAAATACAGCTTCAGAGGAAAGCCAAATGCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTATAAATGATGACGTATaGCACTCGCTCCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFINDDV*HSLPNL
Trigger: CAGGTTGGGGAGCGAGTGCCATACGTCATCATTTAT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATAATAAATGATGACGTATaGCACTCGCTCCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: LCSCATSFSYTRINSLLIINDDV*HSLPNL
Trigger: CAGGTTGGGGAGCGAGTGCCATACGTCATCATTTAT...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAAACTCCCGGATTTCTTaGTTGAGGATGACTGCAACA +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNENSRIS*LRMTAT
Trigger: TGTTGCAGTCATCCTCAACCAAGAAATCCGGGAGTT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATGTTCAGAGAAACACATaGGATGTGTCGATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: SNLRIINILLGMCCSGEYVQRNT*DVSIKA
Trigger: TGCTTTGATCGACACATCCCATGTGTTTCTCTGAAC...ATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGGAGATATGGTGCCTTaGACAATTCTCTATTTACTC +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCGDMVP*TILYLL
Trigger: GAGTAAATAGAGAATTGTCCAAGGCACCATATCTCC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTTATGTGGCTTGTCTTaGGTTTTATTCTGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLCGLS*VLFCRG
Trigger: ACCCCGGCAGAATAAAACCCAAGACAAGCCACATAA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR CAA 72 bp TATCATCTCCATTTAATGCTTTGGAATCTGGGGATATaGGTTGTTGCCAAGGGGGAATTACTGGAGAATCAG +
Preference number: 4 (lower is better)
Translates to: YHLHLMLWNLGI*VVAKGELLENQ
Trigger: CTGATTCTCCAGTAATTCCCCCTTGGCAACAACCAATATCCCCAGATTCCAAAGCATTAAATGGAGATGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTCACTATCCTTACTaGAAACATGTTCGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHSHYPY*KHVRRR
Trigger: GCGGCGGCGAACATGTTTTCAGTAAGGATAGTGACT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGTGCTCTGTCGATACTaGATGCCATCTGAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKVLCRY*MPSEKD
Trigger: ATCTTTCTCAGATGGCATTCAGTATCGACAGAGCAC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACTTTGAACACATGCTaGGCAGTGGAAGATGGATTG +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFTLNTC*AVEDGL
Trigger: CAATCCATCTTCCACTGCTCAGCATGTGTTCAAAGT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTAAACCTGTGATCTTGTaGCTCAGGTTGGCTCATTTG +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFKPVIL*LRLAHL
Trigger: CAAATGAGCCAACCTGAGTCACAAGATCACAGGTTT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAGACTCTTTGTCTTTGTaGACTTCTACCATATTGGCT +
Preference number: 4 (lower is better)
Translates to: NLFSILSSGTREIIRHKSDSLSL*TSTILA
Trigger: AGCCAATATGGTAGAAGTTCACAAAGACAAAGAGTC...TGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAAGTGTGACCTTTGCTTaGCTCTTTGTCTTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNESVTFA*LFVFVN
Trigger: GTTCACAAAGACAAAGAGTCAAGCAAAGGTCACACT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAACTTTGTGTCTAGTGTaGCCTTTGCTTGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNETLCLV*PLLDSL
Trigger: CAAAGAGTCAAGCAAAGGTCACACTAGACACAAAGT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGGTATTTCTGCACAGTaGTCTCTTTTTGGCACAATG +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQGISAQ*SLFGTM
Trigger: CATTGTGCCAAAAAGAGATCACTGTGCAGAAATACC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGCAGTTCCATCTAACTaGGGTATAGAAAGACTGGCT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKAVPSN*GIERLA
Trigger: AGCCAGTCTTTCTATACCTCAGTTAGATGGAACTGC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGATGGAGGGTTTAACTaGAAGCTTGCTTGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQDGGFN*KLACCN
Trigger: ATTGCAACAAGCAAGCTTTCAGTTAAACCCTCCATC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTAAAAGACTGCTCCTTAGTGGCTCCTTTCAGTAGCACAAACATACTGTCAGTAGATGGAGGGTTTAACTaGAAGCTTGCTTGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: LKDCSLVAPFSSTNILSVDGGFN*KLACCN
Trigger: ATTGCAACAAGCAAGCTTTCAGTTAAACCCTCCATC...TACTGACAGTATGTTTGTGCTACTGAAAGGAGCCACTAAGGAGCAGTCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGAAGCAGAAAGGGGATaGTCTACAGCAGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSEAERG*STAEPI
Trigger: AATGGGCTCTGCTGTAGATCATCCCCTTTCTGCTTC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGAAGCAGAAAGGGGATaGTCTACAGCAGAGCCCATT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHEAERG*STAEPI
Trigger: AATGGGCTCTGCTGTAGATCATCCCCTTTCTGCTTC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTATGCAAATCATCTCGTaGACTGGGGAATGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFMQIIS*TGECLQ
Trigger: TTGCAGACATTCCCCAGTTCACGAGATGATTTGCAT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAACACACAATCTGCTGCTaGCTGTCTTTGCAATGCAAA +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKHTICC*LSLQCK
Trigger: TTTGCATTGCAAAGACAGTCAGCAGCAGATTGTGTG...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGTTTCTTGAAACATACAGTTCTAAATCTTCACAGGCCACGTCTACAAGTTCACCACACAATCTGCTGCTaGCTGTCTTTGCAATGCAAA +
Preference number: 4 (lower is better)
Translates to: CFLKHTVLNLHRPRLQVHHTICC*LSLQCK
Trigger: TTTGCATTGCAAAGACAGTCAGCAGCAGATTGTGTG...GTGAACTTGTAGACGTGGCCTGTGAAGATTTAGAACTGTATGTTTCAAGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCCCATGCTATTTGTTTaGTTGGACTTCTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQPMLFV*LDFSRK
Trigger: CTTCCTTGAGAAGTCCAATCAAACAAATAGCATGGG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTTGGCTGTGGGAGGCTAAGAAACACTTCTTTGCTTACTGAACTCCTATTCAATGATGGGACTATCATCTaGTACAGAGTTATCCAACTG +
Preference number: 4 (lower is better)
Translates to: FGCGRLRNTSLLTELLFNDGTII*YRVIQL
Trigger: CAGTTGGATAACTCTGTATCAGATGATAGTCCCATC...ATTGAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAGCCTCCCACAGCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGATGGGACTATCATCTaGTACAGAGTTATCCAACTG +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQDGTII*YRVIQL
Trigger: CAGTTGGATAACTCTGTATCAGATGATAGTCCCATC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAAAAAGAGGTATTGGCTaGGTCAAGAGACTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKKRGIG*VKRLSH
Trigger: ATGGGACAGTCTCTTGACTCAGCCAATACCTCTTTT...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GACTCGAAAGGTAAAGAGGGGAAAACGCTGATGAAGAACATGAAAGCTCACATTGCCATTTTTAGATTGTaGAGGAGAGCTAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: DSKGKEGKTLMKNMKAHIAIFRL*RRASRS
Trigger: AGATCTACTAGCTCTCCTTCACAATCTAAAAATGGC...AATGTGAGCTTTCATGTTCTTCATCAGCGTTTTCCCCTCTTTACCTTTCGAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGTCTCAGACAGGTCATaGTCCAACAAAGTTGCCATA +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFVSDRS*SNKVAI
Trigger: TATGGCAACTTTGTTGGATCATGACCTGTCTGAGAC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGTCTCAGACAGGTCATaGTCCAACAAAGTTGCCATA +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKVSDRS*SNKVAI
Trigger: TATGGCAACTTTGTTGGATCATGACCTGTCTGAGAC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCCTGGCCTTGGATTCTaGGTCATTGCTGAGAATGCT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHPGLGF*VIAENA
Trigger: AGCATTCTCAGCAATGACTCAGAATCCAAGGCCAGG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCCCTGGCCTTGGATTCTaGGTCATTGCTGAGAATGCT +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSPGLGF*VIAENA
Trigger: AGCATTCTCAGCAATGACTCAGAATCCAAGGCCAGG...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCCTGGCCTTGGATTCTaGGTCATTGCTGAGAATGCT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWPGLGF*VIAENA
Trigger: AGCATTCTCAGCAATGACTCAGAATCCAAGGCCAGG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCTTAGGGCTATTACTTaGCCCTTTATTGACAACTCC +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLRAIT*PFIDNS
Trigger: GGAGTTGTCAATAAAGGGTCAAGTAATAGCCCTAAG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATAGTCATCTGGGTTAACTaGAGAGCTAAAGTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LCSCATSFSYTRINSLLIVIWVN*RAKVLS
Trigger: GCTGAGAACTTTAGCTCTTCAGTTAACCCAGATGAC...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGTCATCTGGGTTAACTaGAGAGCTAAAGTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKVIWVN*RAKVLS
Trigger: GCTGAGAACTTTAGCTCTTCAGTTAACCCAGATGAC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTAGGCATTTGGCTTTCCTCTGAAGCTGTATTTCCCGGAGAACAAGTTTCACTGACTATGAAAGCAAAGTaGTTCACATTTCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LGIWLSSEAVFPGEQVSLTMKAK*FTFPSS
Trigger: AGAACTGGGAAATGTGAATCACTTTGCTTTCATAGT...CAGTGAAACTTGTTCTCCGGGAAATACAGCTTCAGAGGAAAGCCAAATGCCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGAAGTTTTCTCTGTATaGTTGGTGTACTATGAAAGC +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCEVFSV*LVYYES
Trigger: GCTTTCATAGTACACCAATCATACAGAGAAAACTTC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTAGCAGAAGAAGTTTTCTCTGTATaGTTGGTGTACTATGAAAGC +
Preference number: 4 (lower is better)
Translates to: PFVRGNPRNASESHILAEEVFSV*LVYYES
Trigger: GCTTTCATAGTACACCAATCATACAGAGAAAACTTC...TTCTGCTAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGATGGTCCATCAATCTaGGAAGTTTCTTTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFDGPSI*EVSFCG
Trigger: CCCACAGAAAGAAACTTCTCAGATTGATGGACCATC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCAGTGGAGTGTCAGATaGGATGCAGTAGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHQWSVR*DAVEQS
Trigger: GCTCTGTTCTACTGCATCTCATCTGACACTCCACTG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTCAGTGGAGTGTCAGATaGGATGCAGTAGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISQWSVR*DAVEQS
Trigger: GCTCTGTTCTACTGCATCTCATCTGACACTCCACTG...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCAGTGGAGTGTCAGATaGGATGCAGTAGAACAGAGC +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWQWSVR*DAVEQS
Trigger: GCTCTGTTCTACTGCATCTCATCTGACACTCCACTG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACCCCAGGAATGCATCTaGATCTCATATCCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTPQECI*ISYPSR
Trigger: TCTGCTAGGATATGAGATTCAGATGCATTCCTGGGG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCTCACTCATTGTATATaGTCCATACTCATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCLTHCI*SILISF
Trigger: GAAAGAGATGAGTATGGATCATATACAATGAGTGAG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAGTTATCAAACCAGTCTaGCAAGACTCGAAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: NLFSILSSGTREIIRHKSVIKPV*QDSKGK
Trigger: TTTACCTTTCGAGTCTTGTCAGACTGGTTTGATAAC...TGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCTTCCACACGGTACTGTaGACCCCTTGTCAGTACATG +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSFHTVL*TPCQYM
Trigger: CATGTACTGACAAGGGGTTCACAGTACCGTGTGGAA...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTTCCACACGGTACTGTaGACCCCTTGTCAGTACATG +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWFHTVL*TPCQYM
Trigger: CATGTACTGACAAGGGGTTCACAGTACCGTGTGGAA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCATACACCTTTTCTTACTaGAGGCTTGACAAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: NLFSILSSGTREIIRHKSYTFSY*RLDKSY
Trigger: GTAGCTTTTGTCAAGCCTTCAGTAAGAAAAGGTGTA...TGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGCTTAAGTCCCAACTaGCGCGCATCAAGCATTCGT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHSLSPN*RASSIR
Trigger: ACGAATGCTTGATGCGCGTCAGTTGGGACTTAAGCT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTAGCTTAAGTCCCAACTaGCGCGCATCAAGCATTCGT +
Preference number: 4 (lower is better)
Translates to: LSHSLYMIHTHLFQLQICSLSPN*RASSIR
Trigger: ACGAATGCTTGATGCGCGTCAGTTGGGACTTAAGCT...ACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGGCAGGAATCTCTTCTaGCTGTTTCTATTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQGRNLF*LFLFLL
Trigger: CAAAAGGAATAGAAACAGTCAGAAGAGATTCCTGCC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GACATAAGTGGTTTCAGAATGTTAGCAGTTCGAGGGGTGAAGCTGCCATTTTTAATCCTTGGTAATTCATaGTACCAGCTGAAGACATCA +
Preference number: 4 (lower is better)
Translates to: DISGFRMLAVRGVKLPFLILGNS*YQLKTS
Trigger: TGATGTCTTCAGCTGGTATCATGAATTACCAAGGAT...TAAAAATGGCAGCTTCACCCCTCGAACTGCTAACATTCTGAAACCACTTATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGGTAGTAAAATATTGTaGAATAGTGCCTTTCCGCCC +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEGSKIL*NSAFPP
Trigger: GGGCGGAAAGGCACTATTTCACAATATTTTACTACC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACTACAGATGCCATGCTaGGTTAGGTCATCACACACA +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTLQMPC*VRSSHT
Trigger: TGTGTGTGATGACCTAACTCAGCATGGCATCTGTAG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCACAAGTTGCTCCTGTTaGCGTTCCAACTCCCGGATT +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSTSCSC*RSNSRI
Trigger: AATCCGGGAGTTGGAACGTCAACAGGAGCAACTTGT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCGAAGTAACACGTCTTaGTACAGACAGTTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQRSNTS*YRQFKE
Trigger: TTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CGGCCAACAATATTTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGGCTGCAGCTCTTGTTaGCATGATGATGATGTCACG +
Preference number: 4 (lower is better)
Translates to: RPTIFISLIVYDPYSSLSGCSSC*HDDDVT
Trigger: CGTGACATCATCATCATGGCAACAAGAGCTGCAGCC...TGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAAATATTGTTGGCCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422377.5
CDS-3UTR GCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGGCTGCAGCTCTTGTTaGCATGATGATGATGTCACG +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHGCSSC*HDDDVT
Trigger: CGTGACATCATCATCATGGCAACAAGAGCTGCAGCC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000358835.7
ENST00000422377.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CCCTTAAAAAGCATTGCCTCTTTTTCTGCAGCAGCCATGATTTCTTCAGCTCTTAGAGGTAAGGAAAGATaGCATGTAGATGAAGACATG +
Preference number: 4 (lower is better)
Translates to: PLKSIASFSAAAMISSALRGKER*HVDEDM
Trigger: CATGTCTTCATCTACATGGCATCTTTCCTTACCTCT...AAGAGCTGAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATGCTTTTTAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCATTATGGCTCCGCTTTaGAAAAGTTCACATATCCTT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCIMAPL*KSSHIL
Trigger: AAGGATATGTGAACTTTTGCAAAGCGGAGCCATAAT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCTTGCAGGATCCAGTTaGATGCAATGTATTACTTTT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCLAGSS*MQCITF
Trigger: AAAAGTAATACATTGCATGCAACTGGATCCTGCAAG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATCTGATAAATGATTCTTaGAGGATCCAGTTGCATGCA +
Preference number: 4 (lower is better)
Translates to: SNLRIINILLGMCCSGEYLINDS*RIQLHA
Trigger: TGCATGCAACTGGATCCTGCAAGAATCATTTATCAG...ATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGACAGAACCTCAGAGTaGAATGTTAACTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKDRTSE*NVNSAE
Trigger: CTCTGCTGAGTTAACATTGCACTCTGAGGTTCTGTC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAAAACATATAGTGTGCTaGTTGCTGGCTGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTKHIVC*LLAEAW
Trigger: CCAAGCCTCAGCCAGCAAGCAGCACACTATATGTTT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCACCGGGATGGTTTATTaGCAGGTTGTAATTTATATG +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCTGMVY*QVVIYM
Trigger: CATATAAATTACAACCTGGCAATAAACCATCCCGGT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTAATGGGATATTTGGTTaGAGGGGAGTCGGGAACTTT +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFNGIFG*RGVGNF
Trigger: AAAGTTCCCGACTCCCCTGCAACCAAATATCCCATT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACATTGCCTCTTTTTCTaGAGCAGCCATGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEHCLFF*SSHDFF
Trigger: GAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACATTGACTGTTCCGCTATaGACACAATCTGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTLTVPL*TQSAAD
Trigger: GTCAGCAGCAGATTGTGTGCATAGCGGAACAGTCAA...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGAACAAGTTTCACTGTaGTTTGACTGTTCCGCTATG +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQEQVSL*FDCSAM
Trigger: CATAGCGGAACAGTCAAAGCACAGTGAAACTTGTTC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGTCTTGTGTAGTATTTaGATTTTGTGCTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCVLCSI*ILCFLL
Trigger: CAGCAGAAAGCACAAAATGCAAATACTACACAAGAC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATAAGGGGAGGAGAGTATTaGAGTAAAAGAGGTATTGGC +
Preference number: 4 (lower is better)
Translates to: LCSCATSFSYTRINSLLIRGGEY*SKRGIG
Trigger: GCCAATACCTCTTTTACTGCAATACTCTCCTCCCCT...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCATCAGAAGGATTACTaGAAAATGGTTCCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCHQKDY*KMVPGK
Trigger: TTTACCAGGAACCATTTTGCAGTAATCCTTCTGATG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TGTTTCTTGAAACATACAGTTCTAAATCTTCACAGGCCACGTCTACAAGTTCACATCCTCCTTGGTATGTaGTGTAGTGGGGAGTATACA +
Preference number: 4 (lower is better)
Translates to: CFLKHTVLNLHRPRLQVHILLGM*CSGEYT
Trigger: TGTATACTCCCCACTACAGCACATACCAAGGAGGAT...GTGAACTTGTAGACGTGGCCTGTGAAGATTTAGAACTGTATGTTTCAAGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAATCCTCCTTGGTATGTaGTGTAGTGGGGAGTATACA +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKILLGM*CSGEYT
Trigger: TGTATACTCCCCACTACAGCACATACCAAGGAGGAT...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCATCTGACTTTCACTTaGAGTTTGACTACATCCCGT +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQHLTFT*SLTTSR
Trigger: ACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCTTTTTCGGGATCACTTaGAGAGGCAACTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSFFGIT*RGNWWQ
Trigger: CTGCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAA...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTCAATTTTTTTCGGGATCACTTaGAGAGGCAACTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LIVYDPYSSLSAANLFSIFFGIT*RGNWWQ
Trigger: CTGCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAA...AATTGAGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCACTGTGGGGTATTTACTaGTGCAAATTGATTCTTTGC +
Preference number: 4 (lower is better)
Translates to: NLFSILSSGTREIIRHKSLWGIY*CKLILC
Trigger: GCAAAGAATCAATTTGCAGCAGTAAATACCCCACAG...TGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACGTCTAGTTCGAGCATaGAACTCCACACTGATTAGG +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTRLVRA*NSTLIR
Trigger: CCTAATCAGTGTGGAGTTGCATGCTCGAACTAGACG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAAAACGAGAACAGAGTTaGTATAGAAGCGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEKREQS*YRSGIQ
Trigger: CTGAATCCCGCTTCTATAGCAACTCTGTTCTCGTTT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TTAAAAGACTGCTCCTTAGTGGCTCCTTTCAGTAGCACAAACATACTGTCAGTAAAACGAGAACAGAGTTaGTATAGAAGCGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: LKDCSLVAPFSSTNILSVKREQS*YRSGIQ
Trigger: CTGAATCCCGCTTCTATAGCAACTCTGTTCTCGTTT...TACTGACAGTATGTTTGTGCTACTGAAAGGAGCCACTAAGGAGCAGTCTTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGATATTTATTATTTCCAAAGGAGCGACATGGTGATGGCATCCTATTTCTTTCCTATCGCCAACCTCAATaGATGGCATTCTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GYLLFPKERHGDGILFLSYRQPQ*MAFSQK
Trigger: TTTCTGGGAGAATGCCATGCATTGAGGTTGGCGATA...GGAAAGAAATAGGATGCCATCACCATGTCGCTCCTTTGGAAATAATAAATATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCCAATCTTAAAAGACTaGTCCTTAGTGGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQPILKD*SLVAPF
Trigger: GAAAGGAGCCACTAAGGAGCAGTCTTTTAAGATTGG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACCAATCTTAAAAGACTaGTCCTTAGTGGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEPILKD*SLVAPF
Trigger: GAAAGGAGCCACTAAGGAGCAGTCTTTTAAGATTGG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAACTGCCGGAGATATGGTaGCTTGGACAATTCTCTATT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKLPEIW*LGQFSI
Trigger: AATAGAGAATTGTCCAAGGCACCATATCTCCGGCAG...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGCGACGATTCTCATTGCTATCTATGGTTGACTTCTCAAAAATTTCAGGACTTAAACTGGTCTAATAACTaGCGGAGATATGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: GDDSHCYLWLTSQKFQDLNWSNN*RRYGAL
Trigger: CAAGGCACCATATCTCCGGCAGTTATTAGACCAGTT...TAAGTCCTGAAATTTTTGAGAAGTCAACCATAGATAGCAATGAGAATCGTCGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACATGCTGAGCAGTaGAAGATGGATTGCCTAAAG +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFTHAEQ*KMDCLK
Trigger: CTTTAGGCAATCCATCTTCCACTGCTCAGCATGTGT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTTTCATCTTCCCATATaGCCTGTAGACCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFFHLPI*PVDQGF
Trigger: GAAACCCTGGTCTACAGGCCATATGGGAAGATGAAA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTTCACTTTCTGTTGCTaGCACAAACCTGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQFTFCC*HKPVIL
Trigger: CAAGATCACAGGTTTGTGCCAGCAACAGAAAGTGAA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTCACTTTCTGTTGCTaGCACAAACCTGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEFTFCC*HKPVIL
Trigger: CAAGATCACAGGTTTGTGCCAGCAACAGAAAGTGAA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TCATTGATTCCACACGGTACTGTGAACCCCTTGTCAGTACATGTAAAAACTGAATTCACTTTCTGTTGCTaGCACAAACCTGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: SLIPHGTVNPLSVHVKTEFTFCC*HKPVIL
Trigger: CAAGATCACAGGTTTGTGCCAGCAACAGAAAGTGAA...TTCAGTTTTTACATGTACTGACAAGGGGTTCACAGTACCGTGTGGAATCAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TCATTGATTCCACACGGTACTGTGAACCCCTTGTCAGTACATGTAAAAACTGAAGAACTTCTACCATATTaGCTGGTGTACACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SLIPHGTVNPLSVHVKTEELLPY*LVYTEA
Trigger: TGCTTCAGTGTACACCAGCCAATATGGTAGAAGTTC...TTCAGTTTTTACATGTACTGACAAGGGGTTCACAGTACCGTGTGGAATCAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACATTGCTGTCCCATCTCTaGGACATCACCAAACTAAGC +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTLLSHL*DITKLS
Trigger: GCTTAGTTTGGTGATGTCCCAGAGATGGGACAGCAA...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTTTGCTGTCCCATCTCTaGGACATCACCAAACTAAGC +
Preference number: 4 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSLLSHL*DITKLS
Trigger: GCTTAGTTTGGTGATGTCCCAGAGATGGGACAGCAA...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTTGCTGGCTGAGGCTTaGCTTTTCTGTTTTATGTTC +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLLAEA*LFCFMF
Trigger: GAACATAAAACAGAAAAGCCAAGCCTCAGCCAGCAA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGATAAATGGGATATTTaGTTGCAGGGGAGTCGGGAA +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFDKWDI*LQGSRE
Trigger: TTCCCGACTCCCCTGCAACCAAATATCCCATTTATC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGTGTTAGTGGATAAATaGGATATTTGGTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQVLVDK*DIWLQG
Trigger: CCCCTGCAACCAAATATCCCATTTATCCACTAACAC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGTGGAGAAGAATTTATaGGACTTGTGCTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQVEKNL*DLCFSQ
Trigger: CTGAGAGAAGCACAAGTCCCATAAATTCTTCTCCAC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGACCAGCAGCGAGGTaGAGAAGAATTTATGGGACT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTRPAAR*RRIYGT
Trigger: AGTCCCATAAATTCTTCTCCACCTCGCTGCTGGTCT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGATTTCTTCAGCTCTTaGATCTGTGGGAGACCAGCA +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTDFFSS*ICGRPA
Trigger: TGCTGGTCTCCCACAGATCCAAGAGCTGAAGAAATC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTAGGGGTATATGCTTaGTCCAGCTTTGATTCTAGG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNELGVYA*SSFDSR
Trigger: CCTAGAATCAAAGCTGGACCAAGCATATACCCCTAA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCAATTATTAGGCATTTaGCTTTCCTCTGAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCQLLGI*LSSEAV
Trigger: TACAGCTTCAGAGGAAAGCCAAATGCCTAATAATTG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CTATTTACTCGGGAGAGTTTGAAAAGTACTGGGCAGTTCAGAGAAACACATGGGCAATTATTAGGCATTTaGCTTTCCTCTGAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: LFTRESLKSTGQFRETHGQLLGI*LSSEAV
Trigger: TACAGCTTCAGAGGAAAGCCAAATGCCTAATAATTG...CCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACAAATTCTGATCAGCTaGGACAAACTGACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEQILIS*DKLTSR
Trigger: TCTGGAAGTCAGTTTGTCCCAGCTGATCAGAATTTG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTTCCACTGGTTGTaGCGACGATTCTCATTGCTA +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEFFHWL*RRFSLL
Trigger: TAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTTTTTCCACTGGTTGTaGCGACGATTCTCATTGCTA +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQFFHWL*RRFSLL
Trigger: TAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGAAGCTATTTTTCCACTaGTTGTGGCGACGATTCTCA +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQKLFFH*LWRRFS
Trigger: TGAGAATCGTCGCCACAACCAGTGGAAAAATAGCTT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGTCCCATTTCTTTTCTaGTGTGACCTTGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEVPFLF*CDLESS
Trigger: ACTGGATTCAAGGTCACACCAGAAAAGAAATGGGAC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGTCCCATTTCTTTTCTaGTGTGACCTTGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQVPFLF*CDLESS
Trigger: ACTGGATTCAAGGTCACACCAGAAAAGAAATGGGAC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTTGACTTCTGTCCCATTTCTTTTCTaGTGTGACCTTGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: YFSTGCGDDSHCYLWLTSVPFLF*CDLESS
Trigger: ACTGGATTCAAGGTCACACCAGAAAAGAAATGGGAC...AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGTCCACCAATCTCCCTaGGCTTTTCTGGTACATCAG +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSVHQSP*AFLVHQ
Trigger: CTGATGTACCAGAAAAGCCCAGGGAGATTGGTGGAC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CGGCCAACAATATTTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGTCCACCAATCTCCCTaGGCTTTTCTGGTACATCAG +
Preference number: 4 (lower is better)
Translates to: RPTIFISLIVYDPYSSLSVHQSP*AFLVHQ
Trigger: CTGATGTACCAGAAAAGCCCAGGGAGATTGGTGGAC...TGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAAATATTGTTGGCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCTTATTGACAACTCCTTaGCCACTGCGAAGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSLLTTP*PLRRGD
Trigger: GTCACCCCTTCGCAGTGGCCAAGGAGTTGTCAATAA...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTTATTGACAACTCCTTaGCCACTGCGAAGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: LSHSLYMIHTHLFQLQICLLTTP*PLRRGD
Trigger: GTCACCCCTTCGCAGTGGCCAAGGAGTTGTCAATAA...ACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTTATTGACAACTCCTTaGCCACTGCGAAGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWLLTTP*PLRRGD
Trigger: GTCACCCCTTCGCAGTGGCCAAGGAGTTGTCAATAA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTAACCAGTTGTCGACTTaGGGCACATTTGCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSNQLST*GTFARH
Trigger: ATGCCTTGCAAATGTGCCCCAAGTCGACAACTGGTT...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAAACCAGTTGTCGACTTaGGGCACATTTGCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTNQLST*GTFARH
Trigger: ATGCCTTGCAAATGTGCCCCAAGTCGACAACTGGTT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGACTACATCCCGTaGTTGGTGCTTGTAAAGCAA +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEFDYIP*LVLVKQ
Trigger: TTGCTTTACAAGCACCAACCACGGGATGTAGTCAAA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTGCAGAGGCAACTGGTaGCAGCATCTGACTTTCACT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWCRGNW*QHLTFT
Trigger: AGTGAAAGTCAGATGCTGCCACCAGTTGCCTCTGCA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACCAAGGGGGAATTACTaGAGAATCAGGGGAGCTATA +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTPRGNY*RIRGAI
Trigger: TATAGCTCCCCTGATTCTCCAGTAATTCCCCCTTGG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGGAATCTGGGGATATTaGTTGTTGCCAAGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTGIWGY*LLPRGN
Trigger: ATTCCCCCTTGGCAACAACCAATATCCCCAGATTCC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGAACAGAGCACAGATTaGGTCAAATTCAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTEQSTD*VKFRIR
Trigger: CCGGATCCTGAATTTGACCCAATCTGTGCTCTGTTC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTCTCAATTTTGTCATCTaGCACCCGAGAGATCATCCG +
Preference number: 4 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSLNFVI*HPRDHP
Trigger: CGGATGATCTCTCGGGTGCCAGATGACAAAATTGAG...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTCTCAATTTTGTCATCTaGCACCCGAGAGATCATCCG +
Preference number: 4 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFLNFVI*HPRDHP
Trigger: CGGATGATCTCTCGGGTGCCAGATGACAAAATTGAG...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TGTTTCTTGAAACATACAGTTCTAAATCTTCACAGGCCACGTCTACAAGTTCACAGCTGTTCTAACATTTaGAGATTTCCACGGACACGG +
Preference number: 4 (lower is better)
Translates to: CFLKHTVLNLHRPRLQVHSCSNI*RFPRTR
Trigger: CCGTGTCCGTGGAAATCTCCAAATGTTAGAACAGCT...GTGAACTTGTAGACGTGGCCTGTGAAGATTTAGAACTGTATGTTTCAAGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGCCAACCTCAATGCATaGCATTCTCCCAGAAAAATT +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEANLNA*HSPRKI
Trigger: AATTTTTCTGGGAGAATGCCATGCATTGAGGTTGGC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAATAAATGATGACGTATaGCACTCGCTCCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTINDDV*HSLPNL
Trigger: CAGGTTGGGGAGCGAGTGCCATACGTCATCATTTAT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCATTCAGTCTCAGAGTTaGGTCCTGCAGGACTTCCAC +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSIQSQS*VLQDFH
Trigger: GTGGAAGTCCTGCAGGACCCAACTCTGAGACTGAAT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGATTCTTGCCAAGGGTaGAAGGATTTGCTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEDSCQG*KDLLGN
Trigger: ATTACCAAGCAAATCCTTCCACCCTTGGCAAGAATC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGCGACGATTCTCATTGCTATCTATGGTTGACTTCTCAAAAATTTCAGGACTTAAACTCCCGGATTTCTTaGTTGAGGATGACTGCAACA +
Preference number: 4 (lower is better)
Translates to: GDDSHCYLWLTSQKFQDLNSRIS*LRMTAT
Trigger: TGTTGCAGTCATCCTCAACCAAGAAATCCGGGAGTT...TAAGTCCTGAAATTTTTGAGAAGTCAACCATAGATAGCAATGAGAATCGTCGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATGGAGATATGGTGCCTTaGACAATTCTCTATTTACTC +
Preference number: 4 (lower is better)
Translates to: SNLRIINILLGMCCSGEYGDMVP*TILYLL
Trigger: GAGTAAATAGAGAATTGTCCAAGGCACCATATCTCC...ATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGTGCTCTGTCGATACTaGATGCCATCTGAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTVLCRY*MPSEKD
Trigger: ATCTTTCTCAGATGGCATTCAGTATCGACAGAGCAC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTTGCTTTTCGGAACTTaGCAGCAGCCAGATTTATTA +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLLFGT*QQPDLL
Trigger: TAATAAATCTGGCTGCTGTCAAGTTCCGAAAAGCAA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCTTGGCTGGTGTACACTaGAGCATTTCAGGAGACAGA +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSLAGVH*SISGDR
Trigger: TCTGTCTCCTGAAATGCTTCAGTGTACACCAGCCAA...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGACTCTTTGTCTTTGTaGACTTCTACCATATTGGCT +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEDSLSL*TSTILA
Trigger: AGCCAATATGGTAGAAGTTCACAAAGACAAAGAGTC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGTCCATGAAAACAGGTaGCTCACTCAGTCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSVHENR*LTQSLG
Trigger: ACCCAAAGACTGAGTGAGTCACCTGTTTTCATGGAC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTAAAGGAGCGACATGGTaGTGGCATCCTATTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSKGATW*WHPISF
Trigger: GAAAGAAATAGGATGCCATCACCATGTCGCTCCTTT...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGGTATTTCTGCACAGTaGTCTCTTTTTGGCACAATG +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFGISAQ*SLFGTM
Trigger: CATTGTGCCAAAAAGAGATCACTGTGCAGAAATACC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGATGGAGGGTTTAACTaGAAGCTTGCTTGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFDGGFN*KLACCN
Trigger: ATTGCAACAAGCAAGCTTTCAGTTAAACCCTCCATC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CCCTTAAAAAGCATTGCCTCTTTTTCTGCAGCAGCCATGATTTCTTCAGCTCTTTTCGTTTTCGGGATTTaGGAGTTCCATCTAAACTTT +
Preference number: 4 (lower is better)
Translates to: PLKSIASFSAAAMISSALFVFGI*EFHLNF
Trigger: AAAGTTTAGATGGAACTCTCAAATCCCGAAAACGAA...AAGAGCTGAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATGCTTTTTAAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATTGTTTAAAAAGTAGTTaGGAGCCTCCAGAACTACTT +
Preference number: 4 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHCLKSS*EPPELL
Trigger: AAGTAGTTCTGGAGGCTCTCAACTACTTTTTAAACA...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTTCACTGTGCTTTaGCTGTTCCGCTATGCACAC +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHSFTVL*LFRYAH
Trigger: GTGTGCATAGCGGAACAGTCAAAGCACAGTGAAACT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCATTTGGCTTTCCTCTaGAGCTGTATTTCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWHLAFL*SCISRR
Trigger: TCTCCGGGAAATACAGCTTCAGAGGAAAGCCAAATG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCCATTTGGCTTTCCTCTaGAGCTGTATTTCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSHLAFL*SCISRR
Trigger: TCTCCGGGAAATACAGCTTCAGAGGAAAGCCAAATG...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGATGGGACTATCATCTaGTACAGAGTTATCCAACTG +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKDGTII*YRVIQL
Trigger: CAGTTGGATAACTCTGTATCAGATGATAGTCCCATC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGCTGAGTCTGTGGTATaGTGCTTGTCTTCATCACAT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTAESVV*CLSSSH
Trigger: ATGTGATGAAGACAAGCATCATACCACAGACTCAGC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTGCTGAGTCTGTGGTATaGTGCTTGTCTTCATCACAT +
Preference number: 4 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSAESVV*CLSSSH
Trigger: ATGTGATGAAGACAAGCATCATACCACAGACTCAGC...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCACCTTGAATCCAGTCTaGATTGTTTGGCTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSTLNPV*IVWLWE
Trigger: CTCCCACAGCCAAACAATTCAGACTGGATTCAAGGT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGCCATTTTTAGATTGTaGAGGAGAGCTAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEAIFRL*RRASRS
Trigger: AGATCTACTAGCTCTCCTTCACAATCTAAAAATGGC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCTTTCACTTGCAGTTTaGCTACATCCCGTGGTTGGT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWLSLAV*LHPVVG
Trigger: ACCAACCACGGGATGTAGTCAAACTGCAAGTGAAAG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTGATGGTCCATCAATCTaGGAAGTTTCTTTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFDGPSI*EVSFCG
Trigger: CCCACAGAAAGAAACTTCTCAGATTGATGGACCATC...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCCCCAGGAATGCATCTaGATCTCATATCCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWPQECI*ISYPSR
Trigger: TCTGCTAGGATATGAGATTCAGATGCATTCCTGGGG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCCCCAGGAATGCATCTaGATCTCATATCCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHPQECI*ISYPSR
Trigger: TCTGCTAGGATATGAGATTCAGATGCATTCCTGGGG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GACTCGAAAGGTAAAGAGGGGAAAACGCTGATGAAGAACATGAAAGCTCACATTCTCACTCATTGTATATaGTCCATACTCATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: DSKGKEGKTLMKNMKAHILTHCI*SILISF
Trigger: GAAAGAGATGAGTATGGATCATATACAATGAGTGAG...AATGTGAGCTTTCATGTTCTTCATCAGCGTTTTCCCCTCTTTACCTTTCGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACATCTGGGATCTTTGCTaGACACTAGGTGTCACAGGA +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHIWDLC*TLGVTG
Trigger: TCCTGTGACACCTAGTGTTCAGCAAAGATCCCAGAT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACTTGTAAGCCTTCATTaGCTGCTTCACCATAAATCT +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNELVSLH*LLHHKS
Trigger: AGATTTATGGTGAAGCAGTCAATGAAGGCTTACAAG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGTCTCTCTGGCTTTGTaGACAATACTATCGCCAACC +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSVSLAL*TILSPT
Trigger: GGTTGGCGATAGTATTGTTCACAAAGCCAGAGAGAC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAAATACTGGGTCCTTCTaGTCCAGTGTTTCATACATG +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKNTGSF*SSVSYM
Trigger: CATGTATGAAACACTGGATCAGAAGGACCCAGTATT...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGGCAGGAATCTCTTCTaGCTGTTTCTATTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKGRNLF*LFLFLL
Trigger: CAAAAGGAATAGAAACAGTCAGAAGAGATTCCTGCC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGATCCTTGGTAATTCATaGTACCAGCTGAAGACATCA +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQILGNS*YQLKTS
Trigger: TGATGTCTTCAGCTGGTATCATGAATTACCAAGGAT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGGTAGTAAAATATTGTaGAATAGTGCCTTTCCGCCC +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKGSKIL*NSAFPP
Trigger: GGGCGGAAAGGCACTATTTCACAATATTTTACTACC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCCTACAGATGCCATGCTaGGTTAGGTCATCACACACA +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSLQMPC*VRSSHT
Trigger: TGTGTGTGATGACCTAACTCAGCATGGCATCTGTAG...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCATGACTGCAACATGCTaGGGTTGGCTCCGACATTTA +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSMTATC*GWLRHL
Trigger: TAAATGTCGGAGCCAACCTCAGCATGTTGCAGTCAT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CGGCCAACAATATTTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCAATGACTGCAACATGCTaGGGTTGGCTCCGACATTTA +
Preference number: 4 (lower is better)
Translates to: RPTIFISLIVYDPYSSLSMTATC*GWLRHL
Trigger: TAAATGTCGGAGCCAACCTCAGCATGTTGCAGTCAT...TGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAAATATTGTTGGCCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GACATAAGTGGTTTCAGAATGTTAGCAGTTCGAGGGGTGAAGCTGCCATTTTTAGTACATTGTAAGAAGTaGGCTATTCAGAGATCAACA +
Preference number: 4 (lower is better)
Translates to: DISGFRMLAVRGVKLPFLVHCKK*AIQRST
Trigger: TGTTGATCTCTGAATAGCTCACTTCTTACAATGTAC...TAAAAATGGCAGCTTCACCCCTCGAACTGCTAACATTCTGAAACCACTTATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AGCAATCTGAGAATTATCAACATCCTCCTTGGTATGTGCTGTAGTGGGGAGTATATTACTTTTCCTTCTTaGTTTTCGGAACTTGACAGC +
Preference number: 4 (lower is better)
Translates to: SNLRIINILLGMCCSGEYITFPS*FSELDS
Trigger: GCTGTCAAGTTCCGAAAAGCAAGAAGGAAAAGTAAT...ATACTCCCCACTACAGCACATACCAAGGAGGATGTTGATAATTCTCAGATTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCACAGGATCCAGTTGCATaGAATGTATTACTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: NLFSILSSGTREIIRHKSQDPVA*NVLLFL
Trigger: AAGGAAAAGTAATACATTGCATGCAACTGGATCCTG...TGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCTGATAAATGATTCTTaGAGGATCCAGTTGCATGCA +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLINDS*RIQLHA
Trigger: TGCATGCAACTGGATCCTGCAAGAATCATTTATCAG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TTAAAAGACTGCTCCTTAGTGGCTCCTTTCAGTAGCACAAACATACTGTCAGTACTGATAAATGATTCTTaGAGGATCCAGTTGCATGCA +
Preference number: 4 (lower is better)
Translates to: LKDCSLVAPFSSTNILSVLINDS*RIQLHA
Trigger: TGCATGCAACTGGATCCTGCAAGAATCATTTATCAG...TACTGACAGTATGTTTGTGCTACTGAAAGGAGCCACTAAGGAGCAGTCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAAATGTTCTTCAATATTaGTGTCCCATCTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNENVLQY*CPISGT
Trigger: TGTCCCAGAGATGGGACAGCAATATTGAAGAACATT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AAAGTGATTGGAAATCCAAAACGAGAACAGAGTTGCTATAGAAGCGGGATTCAGAATGTTCTTCAATATTaGTGTCCCATCTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: KVIGNPKREQSCYRSGIQNVLQY*CPISGT
Trigger: TGTCCCAGAGATGGGACAGCAATATTGAAGAACATT...CTGAATCCCGCTTCTATAGCAACTCTGTTCTCGTTTTGGATTTCCAATCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTCTGTGGGTATTTCTaGACAGTGATCTCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEFCGYF*TVISFW
Trigger: CCAAAAAGAGATCACTGTGCAGAAATACCCACAGAA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TTTGGCTGTGGGAGGCTAAGAAACACTTCTTTGCTTACTGAACTCCTATTCAATTTCTGTGGGTATTTCTaGACAGTGATCTCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: FGCGRLRNTSLLTELLFNFCGYF*TVISFW
Trigger: CCAAAAAGAGATCACTGTGCAGAAATACCCACAGAA...ATTGAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAGCCTCCCACAGCCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp CGGCCAACAATATTTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCAAAACATATAGTGTGCTaGTTGCTGGCTGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RPTIFISLIVYDPYSSLSKHIVC*LLAEAW
Trigger: CCAAGCCTCAGCCAGCAAGCAGCACACTATATGTTT...TGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAAATATTGTTGGCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATATAGTCCAAAGGACTaGTCAGTTTCTAACGTTCCA +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEYSPKD*SVSNVP
Trigger: TGGAACGTTAGAAACTGAGCAGTCCTTTGGACTATA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TGTTTCTTGAAACATACAGTTCTAAATCTTCACAGGCCACGTCTACAAGTTCACCATTGCCTCTTTTTCTaGAGCAGCCATGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: CFLKHTVLNLHRPRLQVHHCLFF*SSHDFF
Trigger: GAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATG...GTGAACTTGTAGACGTGGCCTGTGAAGATTTAGAACTGTATGTTTCAAGAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCATTGCCTCTTTTTCTaGAGCAGCCATGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFHCLFF*SSHDFF
Trigger: GAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACTTAATCTGTGCTCTTaGGCGACTAGTTTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNELNLCS*ATSFSY
Trigger: ATAGGAAAAACTAGTCGCGCAAGAGCACAGATTAAG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTTGACTTCTCTTAATCTGTGCTCTTaGGCGACTAGTTTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: YFSTGCGDDSHCYLWLTSLNLCS*ATSFSY
Trigger: ATAGGAAAAACTAGTCGCGCAAGAGCACAGATTAAG...AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp TTAAAAGACTGCTCCTTAGTGGCTCCTTTCAGTAGCACAAACATACTGTCAGTACAAACAACTGATGGATaGAAATCATCTCGTGAACTG +
Preference number: 4 (lower is better)
Translates to: LKDCSLVAPFSSTNILSVQTTDG*KSSREL
Trigger: CAGTTCACGAGATGATTTGCATCCATCAGTTGTTTG...TACTGACAGTATGTTTGTGCTACTGAAAGGAGCCACTAAGGAGCAGTCTTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACTTGACTGTTCCGCTATaGACACAATCTGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHLTVPL*TQSAAD
Trigger: GTCAGCAGCAGATTGTGTGCATAGCGGAACAGTCAA...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGGCGACGATTCTCATTaGTATCTATGGTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKGDDSH*YLWLTS
Trigger: AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAACTCAGCCAGATCATTTaGAAGTCGAGTTTCTACCAT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKLSQII*KSSFYH
Trigger: ATGGTAGAAACTCGACTTGCAAATGATCTGGCTGAG...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGGGGGATATTGGTTGTTaGCAAGGGGGAATTACTGGA +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWGDIGC*QGGITG
Trigger: TCCAGTAATTCCCCCTTGGCAACAACCAATATCCCC...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGGGGATATTGGTTGTTaGCAAGGGGGAATTACTGGA +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSGDIGC*QGGITG
Trigger: TCCAGTAATTCCCCCTTGGCAACAACCAATATCCCC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACTGTGGGGTATTTACTaGTGCAAATTGATTCTTTGC +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNELWGIY*CKLILC
Trigger: GCAAAGAATCAATTTGCAGCAGTAAATACCCCACAG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCTCATCTCTTTCAGCTaGAAATCTGTTCTCAATTTT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCLISFS*KSVLNF
Trigger: AAAATTGAGAACAGATTTGCAGCTGAAAGAGATGAG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATCTCATCTCTTTCAGCTaGAAATCTGTTCTCAATTTT +
Preference number: 4 (lower is better)
Translates to: DISQYLKRQPFVRGNPRNLISFS*KSVLNF
Trigger: AAAATTGAGAACAGATTTGCAGCTGAAAGAGATGAG...ATTCCTGGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp TATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTTGACTTCTGACATTTACTACAGATaGCATGCTGAGTTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: YFSTGCGDDSHCYLWLTSDIYYR*HAELGH
Trigger: ATGACCTAACTCAGCATGGCATCTGTAGTAAATGTC...AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGACATTTACTACAGATaGCATGCTGAGTTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEDIYYR*HAELGH
Trigger: ATGACCTAACTCAGCATGGCATCTGTAGTAAATGTC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACTTGGTTGAGGATGACTaGAACATGCTGAGGTTGGCT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHLVEDD*NMLRLA
Trigger: AGCCAACCTCAGCATGTTGCAGTCATCCTCAACCAA...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACTGCCGGAGATATGGTaGCTTGGACAATTCTCTATT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTLPEIW*LGQFSI
Trigger: AATAGAGAATTGTCCAAGGCACCATATCTCCGGCAG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTCCATAACCATCGTATaGCACATAGAGGTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQSITIV*HIEVRK
Trigger: TTTCCTTACCTCTATGTGCCATACGATGGTTATGGA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTGGCTGTGGGAGGCTAAGAAACACTTCTTTGCTTACTGAACTCCTATTCAATTCCATAACCATCGTATaGCACATAGAGGTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: FGCGRLRNTSLLTELLFNSITIV*HIEVRK
Trigger: TTTCCTTACCTCTATGTGCCATACGATGGTTATGGA...ATTGAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAGCCTCCCACAGCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTAGAAAGATAGCTTTCTaGCTGCTGTCCATAACCATC +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFRKIAF*LLSITI
Trigger: GATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAACACATGCTGAGCAGTaGAAGATGGATTGCCTAAAG +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTTHAEQ*KMDCLK
Trigger: CTTTAGGCAATCCATCTTCCACTGCTCAGCATGTGT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACATTTCATCTTCCCATATaGCCTGTAGACCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTFHLPI*PVDQGF
Trigger: GAAACCCTGGTCTACAGGCCATATGGGAAGATGAAA...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTTTTCATCTTCCCATATaGCCTGTAGACCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSFHLPI*PVDQGF
Trigger: GAAACCCTGGTCTACAGGCCATATGGGAAGATGAAA...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TGTTTCTTGAAACATACAGTTCTAAATCTTCACAGGCCACGTCTACAAGTTCACGAACTTCTACCATATTaGCTGGTGTACACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: CFLKHTVLNLHRPRLQVHELLPY*LVYTEA
Trigger: TGCTTCAGTGTACACCAGCCAATATGGTAGAAGTTC...GTGAACTTGTAGACGTGGCCTGTGAAGATTTAGAACTGTATGTTTCAAGAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTTGCTGTCCCATCTCTaGGACATCACCAAACTAAGC +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWLLSHL*DITKLS
Trigger: GCTTAGTTTGGTGATGTCCCAGAGATGGGACAGCAA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTCACAGGAAGATACTaGGAGGATCTCTTTCTTACT +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEFTGRY*EDLFLT
Trigger: AGTAAGAAAGAGATCCTCCCAGTATCTTCCTGTGAA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGGAGTCGGGAACTTTTaGCCAAAAGTCCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHGVGNF*PKVLQR
Trigger: CCTTTGAAGGACTTTTGGCCAAAAGTTCCCGACTCC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTGGAGTCGGGAACTTTTaGCCAAAAGTCCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LSHSLYMIHTHLFQLQICGVGNF*PKVLQR
Trigger: CCTTTGAAGGACTTTTGGCCAAAAGTTCCCGACTCC...ACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTGGAGTCGGGAACTTTTaGCCAAAAGTCCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISGVGNF*PKVLQR
Trigger: CCTTTGAAGGACTTTTGGCCAAAAGTTCCCGACTCC...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGTGTTAGTGGATAAATaGGATATTTGGTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFVLVDK*DIWLQG
Trigger: CCCCTGCAACCAAATATCCCATTTATCCACTAACAC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGTGGAGAAGAATTTATaGGACTTGTGCTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFVEKNL*DLCFSQ
Trigger: CTGAGAGAAGCACAAGTCCCATAAATTCTTCTCCAC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGACCAGCAGCGAGGTaGAGAAGAATTTATGGGACT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHRPAAR*RRIYGT
Trigger: AGTCCCATAAATTCTTCTCCACCTCGCTGCTGGTCT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAAATCATCTCGTGAACTaGGGAATGTCTGCAAATCTA +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNENHLVN*GMSANL
Trigger: TAGATTTGCAGACATTCCCCAGTTCACGAGATGATT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TCATTGATTCCACACGGTACTGTGAACCCCTTGTCAGTACATGTAAAAACTGAAAATCATCTCGTGAACTaGGGAATGTCTGCAAATCTA +
Preference number: 4 (lower is better)
Translates to: SLIPHGTVNPLSVHVKTENHLVN*GMSANL
Trigger: TAGATTTGCAGACATTCCCCAGTTCACGAGATGATT...TTCAGTTTTTACATGTACTGACAAGGGGTTCACAGTACCGTGTGGAATCAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TTATCATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTGGCTGCTATTTGTTTGATTaGACTTCTCAAGGAAGTTAC +
Preference number: 4 (lower is better)
Translates to: LSSSSSSFSGSLAEATGGCYLFD*TSQGSY
Trigger: GTAACTTCCTTGAGAAGTCCAATCAAACAAATAGCA...GCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGTTCGAGGTTTTCTTaGGGACGTTACCGATCGTGT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWSSRFS*GRYRSC
Trigger: ACACGATCGGTAACGTCCCCAAGAAAACCTCGAACT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCGAGGTTTTCTTaGGGACGTTACCGATCGTGT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHSSRFS*GRYRSC
Trigger: ACACGATCGGTAACGTCCCCAAGAAAACCTCGAACT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TCTCAGAGAGGTACAGCCAAATTTGAACTCATCATACTTTCCCAAGTTCTCCACTTTGTTTTGTACTTCTaGGAGTTCGAGGTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: SQRGTAKFELIILSQVLHFVLYF*EFEVFL
Trigger: CAAGAAAACCTCGAACTCCCAGAAGTACAAAACAAA...GTGGAGAACTTGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTCTCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GACATAAGTGGTTTCAGAATGTTAGCAGTTCGAGGGGTGAAGCTGCCATTTTTAAGGATTACTGCAAAATaGTTCCTGGTAAATAGTCTC +
Preference number: 4 (lower is better)
Translates to: DISGFRMLAVRGVKLPFLRITAK*FLVNSL
Trigger: GAGACTATTTACCAGGAACCATTTTGCAGTAATCCT...TAAAAATGGCAGCTTCACCCCTCGAACTGCTAACATTCTGAAACCACTTATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACTCCCTGGGCTTTTCTaGTACATCAGAAGGATTACT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTLPGLF*YIRRIT
Trigger: AGTAATCCTTCTGATGTACCAGAAAAGCCCAGGGAG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAACCAGTTGTCGACTTaGGGCACATTTGCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHNQLST*GTFARH
Trigger: ATGCCTTGCAAATGTGCCCCAAGTCGACAACTGGTT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAACTTACATCCATTTTTaGAGGCACTACAGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNETYIHF*RHYRFV
Trigger: GACAAACCTGTAGTGCCTCCAAAAATGGATGTAAGT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTGGCTGTGGGAGGCTAAGAAACACTTCTTTGCTTACTGAACTCCTATTCAATACTTACATCCATTTTTaGAGGCACTACAGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: FGCGRLRNTSLLTELLFNTYIHF*RHYRFV
Trigger: GACAAACCTGTAGTGCCTCCAAAAATGGATGTAAGT...ATTGAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAGCCTCCCACAGCCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAAGTGGGGAGTATACATaGACTTACATCCATTTTTGG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNESGEYT*TYIHFW
Trigger: CCAAAAATGGATGTAAGTCCATGTATACTCCCCACT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCCAAGGGGGAATTACTaGAGAATCAGGGGAGCTATA +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHPRGNY*RIRGAI
Trigger: TATAGCTCCCCTGATTCTCCAGTAATTCCCCCTTGG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGGGAATCTGGGGATATTaGTTGTTGCCAAGGGGGAAT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWGIWGY*LLPRGN
Trigger: ATTCCCCCTTGGCAACAACCAATATCCCCAGATTCC...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCACTCCATTTAATGCTTTaGAATCTGGGGATATTGGTT +
Preference number: 4 (lower is better)
Translates to: NLFSILSSGTREIIRHKSLHLML*NLGILV
Trigger: AACCAATATCCCCAGATTCCAAAGCATTAAATGGAG...TGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GACTCGAAAGGTAAAGAGGGGAAAACGCTGATGAAGAACATGAAAGCTCACATTAGAAGTTTCTTTCTGTaGGGTATTTACTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: DSKGKEGKTLMKNMKAHIRSFFL*GIYCCK
Trigger: TTTGCAGCAGTAAATACCCCACAGAAAGAAACTTCT...AATGTGAGCTTTCATGTTCTTCATCAGCGTTTTCCCCTCTTTACCTTTCGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGAACAGAGCACAGATTaGGTCAAATTCAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHEQSTD*VKFRIR
Trigger: CCGGATCCTGAATTTGACCCAATCTGTGCTCTGTTC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGGAACAGAGCACAGATTaGGTCAAATTCAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWEQSTD*VKFRIR
Trigger: CCGGATCCTGAATTTGACCCAATCTGTGCTCTGTTC...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCCTCAATTTTGTCATCTaGCACCCGAGAGATCATCCG +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSLNFVI*HPRDHP
Trigger: CGGATGATCTCTCGGGTGCCAGATGACAAAATTGAG...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGCTGTTCTAACATTTaGAGATTTCCACGGACACGG +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTSCSNI*RFPRTR
Trigger: CCGTGTCCGTGGAAATCTCCAAATGTTAGAACAGCT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAAACTTCAATTTCACTaGTTTAGGATTGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCKLQFH*FRIGSS
Trigger: ACTGCTACCAATCCTAAACCAGTGAAATTGAAGTTT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTGGCACACAAGCTCCTaGTTTATAAGAAAAACTTCC +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQWHTSS*FIRKTS
Trigger: GGAAGTTTTTCTTATAAACCAGGAGCTTGTGTGCCA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCTGTAAGTTCAAGGGCTaGCACACAAGCTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSCKFKG*HTSSWF
Trigger: AAACCAGGAGCTTGTGTGCCAGCCCTTGAACTTACA...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTGTAAGTTCAAGGGCTaGCACACAAGCTCCTGGTTT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWCKFKG*HTSSWF
Trigger: AAACCAGGAGCTTGTGTGCCAGCCCTTGAACTTACA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGATTCTTGCCAAGGGTaGAAGGATTTGCTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKDSCQG*KDLLGN
Trigger: ATTACCAAGCAAATCCTTCCACCCTTGGCAAGAATC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATAGATTCTTGCCAAGGGTaGAAGGATTTGCTTGGTAAT +
Preference number: 4 (lower is better)
Translates to: LCSCATSFSYTRINSLLIDSCQG*KDLLGN
Trigger: ATTACCAAGCAAATCCTTCCACCCTTGGCAAGAATC...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGTTCAGAGAAACACATaGGATGTGTCGATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFVQRNT*DVSIKA
Trigger: TGCTTTGATCGACACATCCCATGTGTTTCTCTGAAC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGGAGATATGGTGCCTTaGACAATTCTCTATTTACTC +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQGDMVP*TILYLL
Trigger: GAGTAAATAGAGAATTGTCCAAGGCACCATATCTCC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR CAA 72 bp GGGGTATATGCTTGGTCCAGCTTTGATTCTAGGGAATaGCGATATTCACTTAACTTTCCGATTGATGACAAA +
Preference number: 4 (lower is better)
Translates to: GVYAWSSFDSRE*RYSLNFPIDDK
Trigger: TTTGTCATCAATCGGAAAGTTAAGTGAATATCGCAATTCCCTAGAATCAAAGCTGGACCAAGCATATACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 72 bp GTTTTCTTGGGGACGTTACCGATCGTGTCCGTTTATTaGCTTTGTTATGCTCAAGGGAACCAGAAATATTTT +
Preference number: 4 (lower is better)
Translates to: VFLGTLPIVSVY*LCYAQGNQKYF
Trigger: AAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCGGTAACGTCCCCAAGAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 72 bp ACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTaGACTTCTCAAAAATTTCAGGACTTAAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: TGCGDDSHCYLW*TSQKFQDLKYQ
Trigger: CTGGTACTTTAAGTCCTGAAATTTTTGAGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 72 bp CTAAAGTTCTCAGCAGATTTTACAACTCCAGTTGGCTaGGTTTTAGGCAGTTTCTTGGAACGTTCGTATTCT +
Preference number: 4 (lower is better)
Translates to: LKFSADFTTPVG*VLGSFLERSYS
Trigger: AGAATACGAACGTTCCAAGAAACTGCCTAAAACCAAGCCAACTGGAGTTGTAAAATCTGCTGAGAACTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 72 bp TCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTaGGTGCTTGTAAAGCAATCTGAGAATTATCAACAT +
Preference number: 4 (lower is better)
Translates to: SDFHLQFDYIPW*VLVKQSENYQH
Trigger: ATGTTGATAATTCTCAGATTGCTTTACAAGCACCAACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTGTGCTCTGTCGATACTaGATGCCATCTGAGAAAGAT +
Preference number: 4 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISVLCRY*MPSEKD
Trigger: ATCTTTCTCAGATGGCATTCAGTATCGACAGAGCAC...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCACTTTGAACACATGCTaGGCAGTGGAAGATGGATTG +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSTLNTC*AVEDGL
Trigger: CAATCCATCTTCCACTGCTCAGCATGTGTTCAAAGT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAAACCTGTGATCTTGTaGCTCAGGTTGGCTCATTTG +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWKPVIL*LRLAHL
Trigger: CAAATGAGCCAACCTGAGTCACAAGATCACAGGTTT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTAAACCTGTGATCTTGTaGCTCAGGTTGGCTCATTTG +
Preference number: 4 (lower is better)
Translates to: LSHSLYMIHTHLFQLQICKPVIL*LRLAHL
Trigger: CAAATGAGCCAACCTGAGTCACAAGATCACAGGTTT...ACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGACTCTTTGTCTTTGTaGACTTCTACCATATTGGCT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKDSLSL*TSTILA
Trigger: AGCCAATATGGTAGAAGTTCACAAAGACAAAGAGTC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGTGTGACCTTTGCTTaGCTCTTTGTCTTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTSVTFA*LFVFVN
Trigger: GTTCACAAAGACAAAGAGTCAAGCAAAGGTCACACT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAACTTTGTGTCTAGTGTaGCCTTTGCTTGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTTLCLV*PLLDSL
Trigger: CAAAGAGTCAAGCAAAGGTCACACTAGACACAAAGT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCAAAGGAGCGACATGGTaGTGGCATCCTATTTCTTTC +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSKGATW*WHPISF
Trigger: GAAAGAAATAGGATGCCATCACCATGTCGCTCCTTT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGCAGTTCCATCTAACTaGGGTATAGAAAGACTGGCT +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSAVPSN*GIERLA
Trigger: AGCCAGTCTTTCTATACCTCAGTTAGATGGAACTGC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGGCAGTTCCATCTAACTaGGGTATAGAAAGACTGGCT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWAVPSN*GIERLA
Trigger: AGCCAGTCTTTCTATACCTCAGTTAGATGGAACTGC...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTCAATTGCAGTTCCATCTAACTaGGGTATAGAAAGACTGGCT +
Preference number: 4 (lower is better)
Translates to: LIVYDPYSSLSAANLFSIAVPSN*GIERLA
Trigger: AGCCAGTCTTTCTATACCTCAGTTAGATGGAACTGC...AATTGAGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGATGGAGGGTTTAACTaGAAGCTTGCTTGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTDGGFN*KLACCN
Trigger: ATTGCAACAAGCAAGCTTTCAGTTAAACCCTCCATC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGTGAGTTACAAAACTTaGCTCACTGTCTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTVSYKT*LTVFSL
Trigger: GAGACTGAAGACAGTGAGTCAAGTTTTGTAACTCAC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAACCAATTTCCATGGGATaGGGTAGACTAATTTTTGAG +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKPISMG*GRLIFE
Trigger: CTCAAAAATTAGTCTACCTCATCCCATGGAAATTGG...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTCAATTAGCATTGTAAGATGGTaGGGGAGGAGAAAGAATAGC +
Preference number: 4 (lower is better)
Translates to: LIVYDPYSSLSAANLFSISIVRW*GRRKNS
Trigger: GCTATTCTTTCTCCTCCCTCACCATCTTACAATGCT...AATTGAGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCAGCATTGTAAGATGGTaGGGGAGGAGAAAGAATAGC +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSSIVRW*GRRKNS
Trigger: GCTATTCTTTCTCCTCCCTCACCATCTTACAATGCT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCATGCAAATCATCTCGTaGACTGGGGAATGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSMQIIS*TGECLQ
Trigger: TTGCAGACATTCCCCAGTTCACGAGATGATTTGCAT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAAGAATTACAAACAACTaGTGGATGCAAATCATCTCG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNERITNN*WMQIIS
Trigger: CGAGATGATTTGCATCCATCAGTTGTTTGTAATTCT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGAGAATTACAAACAACTaGTGGATGCAAATCATCTCG +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQRITNN*WMQIIS
Trigger: CGAGATGATTTGCATCCATCAGTTGTTTGTAATTCT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCACACAATCTGCTGCTaGCTGTCTTTGCAATGCAAA +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWHTICC*LSLQCK
Trigger: TTTGCATTGCAAAGACAGTCAGCAGCAGATTGTGTG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTCAATTCACACAATCTGCTGCTaGCTGTCTTTGCAATGCAAA +
Preference number: 4 (lower is better)
Translates to: LIVYDPYSSLSAANLFSIHTICC*LSLQCK
Trigger: TTTGCATTGCAAAGACAGTCAGCAGCAGATTGTGTG...AATTGAGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGATGGGACTATCATCTaGTACAGAGTTATCCAACTG +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTDGTII*YRVIQL
Trigger: CAGTTGGATAACTCTGTATCAGATGATAGTCCCATC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTAAAAGAGGTATTGGCTaGGTCAAGAGACTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISKRGIG*VKRLSH
Trigger: ATGGGACAGTCTCTTGACTCAGCCAATACCTCTTTT...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGTCTCAGACAGGTCATaGTCCAACAAAGTTGCCATA +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHVSDRS*SNKVAI
Trigger: TATGGCAACTTTGTTGGATCATGACCTGTCTGAGAC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGTCTCAGACAGGTCATaGTCCAACAAAGTTGCCATA +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSVSDRS*SNKVAI
Trigger: TATGGCAACTTTGTTGGATCATGACCTGTCTGAGAC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGTCATCTGGGTTAACTaGAGAGCTAAAGTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSVIWVN*RAKVLS
Trigger: GCTGAGAACTTTAGCTCTTCAGTTAACCCAGATGAC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGACTATGAAAGCAAAGTaGTTCACATTTCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQTMKAK*FTFPSS
Trigger: AGAACTGGGAAATGTGAATCACTTTGCTTTCATAGT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTTGACTTCTACTATGAAAGCAAAGTaGTTCACATTTCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: YFSTGCGDDSHCYLWLTSTMKAK*FTFPSS
Trigger: AGAACTGGGAAATGTGAATCACTTTGCTTTCATAGT...AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGAAGTTTTCTCTGTATaGTTGGTGTACTATGAAAGC +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEEVFSV*LVYYES
Trigger: GCTTTCATAGTACACCAATCATACAGAGAAAACTTC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTAAAAGACTGCTCCTTAGTGGCTCCTTTCAGTAGCACAAACATACTGTCAGTAGAAGTTTTCTCTGTATaGTTGGTGTACTATGAAAGC +
Preference number: 4 (lower is better)
Translates to: LKDCSLVAPFSSTNILSVEVFSV*LVYYES
Trigger: GCTTTCATAGTACACCAATCATACAGAGAAAACTTC...TACTGACAGTATGTTTGTGCTACTGAAAGGAGCCACTAAGGAGCAGTCTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCTCACTCATTGTATATaGTCCATACTCATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLTHCI*SILISF
Trigger: GAAAGAGATGAGTATGGATCATATACAATGAGTGAG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGTTATCAAACCAGTCTaGCAAGACTCGAAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFVIKPV*QDSKGK
Trigger: TTTACCTTTCGAGTCTTGTCAGACTGGTTTGATAAC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATACACCTTTTCTTACTaGAGGCTTGACAAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKYTFSY*RLDKSY
Trigger: GTAGCTTTTGTCAAGCCTTCAGTAAGAAAAGGTGTA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAACTTGTAAGCCTTCATTaGCTGCTTCACCATAAATCT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKLVSLH*LLHHKS
Trigger: AGATTTATGGTGAAGCAGTCAATGAAGGCTTACAAG...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTATCAATACCAATAAGTaGGAAGATTCTTGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFINTNK*EDSCQG
Trigger: CCCTTGGCAAGAATCTTCTCACTTATTGGTATTGAT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATAATCAATACCAATAAGTaGGAAGATTCTTGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LCSCATSFSYTRINSLLIINTNK*EDSCQG
Trigger: CCCTTGGCAAGAATCTTCTCACTTATTGGTATTGAT...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAATCAATACCAATAAGTaGGAAGATTCTTGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKINTNK*EDSCQG
Trigger: CCCTTGGCAAGAATCTTCTCACTTATTGGTATTGAT...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGGTAGTAAAATATTGTaGAATAGTGCCTTTCCGCCC +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTGSKIL*NSAFPP
Trigger: GGGCGGAAAGGCACTATTTCACAATATTTTACTACC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAAGAGGTAAGGAAAGATaGCATGTAGATGAAGACATG +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKRGKER*HVDEDM
Trigger: CATGTCTTCATCTACATGGCATCTTTCCTTACCTCT...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGAGAGGTAAGGAAAGATaGCATGTAGATGAAGACATG +
Preference number: 4 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQRGKER*HVDEDM
Trigger: CATGTCTTCATCTACATGGCATCTTTCCTTACCTCT...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATCTGTCGATACTGAATaGCATCTGAGAAAGATAGCT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKSVDTE*HLRKIA
Trigger: AGCTATCTTTCTCAGATGGCATTCAGTATCGACAGA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAATTACTTTTCCTTCTTaGTTTTCGGAACTTGACAGC +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEITFPS*FSELDS
Trigger: GCTGTCAAGTTCCGAAAAGCAAGAAGGAAAAGTAAT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACAGGATCCAGTTGCATaGAATGTATTACTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEQDPVA*NVLLFL
Trigger: AAGGAAAAGTAATACATTGCATGCAACTGGATCCTG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCAGGATCCAGTTGCATaGAATGTATTACTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQQDPVA*NVLLFL
Trigger: AAGGAAAAGTAATACATTGCATGCAACTGGATCCTG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACTTGCAGGATCCAGTTaGATGCAATGTATTACTTTT +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNELAGSS*MQCITF
Trigger: AAAAGTAATACATTGCATGCAACTGGATCCTGCAAG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCTTGCAGGATCCAGTTaGATGCAATGTATTACTTTT +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLAGSS*MQCITF
Trigger: AAAAGTAATACATTGCATGCAACTGGATCCTGCAAG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCTGATAAATGATTCTTaGAGGATCCAGTTGCATGCA +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFLINDS*RIQLHA
Trigger: TGCATGCAACTGGATCCTGCAAGAATCATTTATCAG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTTTTTCACTTTCTGTTaGTGGCACAAACCTGTGATC +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFFFTFC*WHKPVI
Trigger: GATCACAGGTTTGTGCCAGCAACAGAAAGTGAAAAA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGACAGAACCTCAGAGTaGAATGTTAACTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSDRTSE*NVNSAE
Trigger: CTCTGCTGAGTTAACATTGCACTCTGAGGTTCTGTC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTGACAGAACCTCAGAGTaGAATGTTAACTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LSHSLYMIHTHLFQLQICDRTSE*NVNSAE
Trigger: CTCTGCTGAGTTAACATTGCACTCTGAGGTTCTGTC...ACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTGACAGAACCTCAGAGTaGAATGTTAACTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISDRTSE*NVNSAE
Trigger: CTCTGCTGAGTTAACATTGCACTCTGAGGTTCTGTC...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGATATTTATTATTTCCAAAGGAGCGACATGGTGATGGCATCCTATTTCTTTCCAATGTTCTTCAATATTaGTGTCCCATCTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: GYLLFPKERHGDGILFLSNVLQY*CPISGT
Trigger: TGTCCCAGAGATGGGACAGCAATATTGAAGAACATT...GGAAAGAAATAGGATGCCATCACCATGTCGCTCCTTTGGAAATAATAAATATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATTCTGTGGGTATTTCTaGACAGTGATCTCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKFCGYF*TVISFW
Trigger: CCAAAAAGAGATCACTGTGCAGAAATACCCACAGAA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACTGAATGAACAGTACTaGTTAAAGATCCAGGGTATT +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNELNEQY*LKIQGI
Trigger: AATACCCTGGATCTTTAAGCAGTACTGTTCATTCAG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAACCGGGATGGTTTATTaGCAGGTTGTAATTTATATG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNETGMVY*QVVIYM
Trigger: CATATAAATTACAACCTGGCAATAAACCATCCCGGT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAAGTCTCCTGATGACCTaGAAGTTTCCTTTTATTCAA +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNESLLMT*KFPFIQ
Trigger: TTGAATAAAAGGAAACTTGCAGGTCATCAGGAGACT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTATAGTCCAAAGGACTaGTCAGTTTCTAACGTTCCA +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFYSPKD*SVSNVP
Trigger: TGGAACGTTAGAAACTGAGCAGTCCTTTGGACTATA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTCAATTAATGGGATATTTGGTTaGAGGGGAGTCGGGAACTTT +
Preference number: 4 (lower is better)
Translates to: LIVYDPYSSLSAANLFSINGIFG*RGVGNF
Trigger: AAAGTTCCCGACTCCCCTGCAACCAAATATCCCATT...AATTGAGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCAAACAACTGATGGATaGAAATCATCTCGTGAACTG +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFQTTDG*KSSREL
Trigger: CAGTTCACGAGATGATTTGCATCCATCAGTTGTTTG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGAACAAGTTTCACTGTaGTTTGACTGTTCCGCTATG +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTEQVSL*FDCSAM
Trigger: CATAGCGGAACAGTCAAAGCACAGTGAAACTTGTTC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGTCTTGTGTAGTATTTaGATTTTGTGCTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQVLCSI*ILCFLL
Trigger: CAGCAGAAAGCACAAAATGCAAATACTACACAAGAC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGTCTTGTGTAGTATTTaGATTTTGTGCTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEVLCSI*ILCFLL
Trigger: CAGCAGAAAGCACAAAATGCAAATACTACACAAGAC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCAGGGGAGGAGAGTATTaGAGTAAAAGAGGTATTGGC +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSRGGEY*SKRGIG
Trigger: GCCAATACCTCTTTTACTGCAATACTCTCCTCCCCT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCATCAGAAGGATTACTaGAAAATGGTTCCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQHQKDY*KMVPGK
Trigger: TTTACCAGGAACCATTTTGCAGTAATCCTTCTGATG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCATCCTCCTTGGTATGTaGTGTAGTGGGGAGTATACA +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSILLGM*CSGEYT
Trigger: TGTATACTCCCCACTACAGCACATACCAAGGAGGAT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACATCTGACTTTCACTTaGAGTTTGACTACATCCCGT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTHLTFT*SLTTSR
Trigger: ACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTAAACGAGAACAGAGTTaGTATAGAAGCGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSKREQS*YRSGIQ
Trigger: CTGAATCCCGCTTCTATAGCAACTCTGTTCTCGTTT...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTATCGCCAACCTCAATaGATGGCATTCTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWYRQPQ*MAFSQK
Trigger: TTTCTGGGAGAATGCCATGCATTGAGGTTGGCGATA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACCAATCTTAAAAGACTaGTCCTTAGTGGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTPILKD*SLVAPF
Trigger: GAAAGGAGCCACTAAGGAGCAGTCTTTTAAGATTGG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCCTGCCGGAGATATGGTaGCTTGGACAATTCTCTATT +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSLPEIW*LGQFSI
Trigger: AATAGAGAATTGTCCAAGGCACCATATCTCCGGCAG...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAACTGGTCTAATAACTaGCGGAGATATGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWNWSNN*RRYGAL
Trigger: CAAGGCACCATATCTCCGGCAGTTATTAGACCAGTT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAATATTATTTTTAAAGTATTaGAACAGGCCCACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: LFSILSSGTREIIRHKSILFLKY*NRPTGL
Trigger: CAAACCTGTGGGCCTGTTGCAATACTTTAAAAATAA...TATTGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTCCATAACCATCGTATaGCACATAGAGGTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFSITIV*HIEVRK
Trigger: TTTCCTTACCTCTATGTGCCATACGATGGTTATGGA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGAAAGATAGCTTTCTaGCTGCTGTCCATAACCATC +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTRKIAF*LLSITI
Trigger: GATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCACACATGCTGAGCAGTaGAAGATGGATTGCCTAAAG +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSTHAEQ*KMDCLK
Trigger: CTTTAGGCAATCCATCTTCCACTGCTCAGCATGTGT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTTTCATCTTCCCATATaGCCTGTAGACCAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWFHLPI*PVDQGF
Trigger: GAAACCCTGGTCTACAGGCCATATGGGAAGATGAAA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACATTCACTTTCTGTTGCTaGCACAAACCTGTGATCTTG +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTFTFCC*HKPVIL
Trigger: CAAGATCACAGGTTTGTGCCAGCAACAGAAAGTGAA...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATCAGTTGAACTTCTGTaGGTATTTCTGCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKSVELL*VFLHSD
Trigger: ATCACTGTGCAGAAATACCCACAGAAGTTCAACTGA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTTCACAGGAAGATACTaGGAGGATCTCTTTCTTACT +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFFTGRY*EDLFLT
Trigger: AGTAAGAAAGAGATCCTCCCAGTATCTTCCTGTGAA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGATAAATGGGATATTTaGTTGCAGGGGAGTCGGGAA +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHDKWDI*LQGSRE
Trigger: TTCCCGACTCCCCTGCAACCAAATATCCCATTTATC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGTGTTAGTGGATAAATaGGATATTTGGTTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTVLVDK*DIWLQG
Trigger: CCCCTGCAACCAAATATCCCATTTATCCACTAACAC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGATATTTATTATTTCCAAAGGAGCGACATGGTGATGGCATCCTATTTCTTTCCAATCATCTCGTGAACTaGGGAATGTCTGCAAATCTA +
Preference number: 4 (lower is better)
Translates to: GYLLFPKERHGDGILFLSNHLVN*GMSANL
Trigger: TAGATTTGCAGACATTCCCCAGTTCACGAGATGATT...GGAAAGAAATAGGATGCCATCACCATGTCGCTCCTTTGGAAATAATAAATATCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TTTGGCTGTGGGAGGCTAAGAAACACTTCTTTGCTTACTGAACTCCTATTCAATCAATTATTAGGCATTTaGCTTTCCTCTGAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: FGCGRLRNTSLLTELLFNQLLGI*LSSEAV
Trigger: TACAGCTTCAGAGGAAAGCCAAATGCCTAATAATTG...ATTGAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAGCCTCCCACAGCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCATGCTATTTGTTTGATTaGACTTCTCAAGGAAGTTAC +
Preference number: 4 (lower is better)
Translates to: NLFSILSSGTREIIRHKSCYLFD*TSQGSY
Trigger: GTAACTTCCTTGAGAAGTCCAATCAAACAAATAGCA...TGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTTTGTTTTGTACTTCTaGGAGTTCGAGGTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQFVLYF*EFEVFL
Trigger: CAAGAAAACCTCGAACTCCCAGAAGTACAAAACAAA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATTCTATAGCTTGTCCTaGAAAAAGATCCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKFYSLS*KKILNS
Trigger: GCTGTTCAGGATCTTTTTCCAGGACAAGCTATAGAA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACATTTTTCCACTGGTTGTaGCGACGATTCTCATTGCTA +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTFFHWL*RRFSLL
Trigger: TAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAA...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTAAGCTATTTTTCCACTaGTTGTGGCGACGATTCTCA +
Preference number: 4 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSKLFFH*LWRRFS
Trigger: TGAGAATCGTCGCCACAACCAGTGGAAAAATAGCTT...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGTCCCATTTCTTTTCTaGTGTGACCTTGAATCCAGT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTVPFLF*CDLESS
Trigger: ACTGGATTCAAGGTCACACCAGAAAAGAAATGGGAC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTGGCTGTGGGAGGCTAAGAAACACTTCTTTGCTTACTGAACTCCTATTCAATAGGATTACTGCAAAATaGTTCCTGGTAAATAGTCTC +
Preference number: 4 (lower is better)
Translates to: FGCGRLRNTSLLTELLFNRITAK*FLVNSL
Trigger: GAGACTATTTACCAGGAACCATTTTGCAGTAATCCT...ATTGAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAGCCTCCCACAGCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCTCCCTGGGCTTTTCTaGTACATCAGAAGGATTACT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHLPGLF*YIRRIT
Trigger: AGTAATCCTTCTGATGTACCAGAAAAGCCCAGGGAG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGTTCGTATTCTTCTTTaGCTTGAAGCCACACTTGAA +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFVRILL*LEATLE
Trigger: TTCAAGTGTGGCTTCAAGCCAAAGAAGAATACGAAC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTACAACTCCAGTTaGCTTGGTTTTAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEFYNSS*LGFRQF
Trigger: AAACTGCCTAAAACCAAGCCAACTGGAGTTGTAAAA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTTGACTTCTTTTTACAACTCCAGTTaGCTTGGTTTTAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: YFSTGCGDDSHCYLWLTSFYNSS*LGFRQF
Trigger: AAACTGCCTAAAACCAAGCCAACTGGAGTTGTAAAA...AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTAGTGGGGAGTATACATaGACTTACATCCATTTTTGG +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFSGEYT*TYIHFW
Trigger: CCAAAAATGGATGTAAGTCCATGTATACTCCCCACT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCTCCATTTAATGCTTTaGAATCTGGGGATATTGGTT +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLHLML*NLGILV
Trigger: AACCAATATCCCCAGATTCCAAAGCATTAAATGGAG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACTCCATTTAATGCTTTaGAATCTGGGGATATTGGTT +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNELHLML*NLGILV
Trigger: AACCAATATCCCCAGATTCCAAAGCATTAAATGGAG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAAGAAGTTTCTTTCTGTaGGGTATTTACTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNERSFFL*GIYCCK
Trigger: TTTGCAGCAGTAAATACCCCACAGAAAGAAACTTCT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTGGCTGTGGGAGGCTAAGAAACACTTCTTTGCTTACTGAACTCCTATTCAATAGAAGTTTCTTTCTGTaGGGTATTTACTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: FGCGRLRNTSLLTELLFNRSFFL*GIYCCK
Trigger: TTTGCAGCAGTAAATACCCCACAGAAAGAAACTTCT...ATTGAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAGCCTCCCACAGCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCTGTTCTAACATTTaGAGATTTCCACGGACACGG +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWSCSNI*RFPRTR
Trigger: CCGTGTCCGTGGAAATCTCCAAATGTTAGAACAGCT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATTTTGCATCAAATACTaGGTCCTTCTGATCCAGTGT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKFCIKY*VLLIQC
Trigger: ACACTGGATCAGAAGGACCCAGTATTTGATGCAAAA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGATATTTATTATTTCCAAAGGAGCGACATGGTGATGGCATCCTATTTCTTTCCTTTTGCATCAAATACTaGGTCCTTCTGATCCAGTGT +
Preference number: 4 (lower is better)
Translates to: GYLLFPKERHGDGILFLSFCIKY*VLLIQC
Trigger: ACACTGGATCAGAAGGACCCAGTATTTGATGCAAAA...GGAAAGAAATAGGATGCCATCACCATGTCGCTCCTTTGGAAATAATAAATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAACTCCCGGATTTCTTaGTTGAGGATGACTGCAACA +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWNSRIS*LRMTAT
Trigger: TGTTGCAGTCATCCTCAACCAAGAAATCCGGGAGTT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGTTCAGAGAAACACATaGGATGTGTCGATCAAAGCA +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTVQRNT*DVSIKA
Trigger: TGCTTTGATCGACACATCCCATGTGTTTCTCTGAAC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTCAAAATGCTACACGTaGTACTACTGTTTGCACAGT +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFSKCYT*YYCLHS
Trigger: ACTGTGCAAACAGTAGTACCACGTGTAGCATTTTGA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATCAAAATGCTACACGTaGTACTACTGTTTGCACAGT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKSKCYT*YYCLHS
Trigger: ACTGTGCAAACAGTAGTACCACGTGTAGCATTTTGA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR CAA 72 bp CTTGGGGACGTTACCGATCGTGTCCGTTTATTTGCTTaGTTATGCTCAAGGGAACCAGAAATATTTTTATTT +
Preference number: 4 (lower is better)
Translates to: LGDVTDRVRLFA*LCSREPEIFLF
Trigger: AAATAAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCGGTAACGTCCCCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
3UTR CAA 72 bp AAGCTATTTTTCCACTGGTTGTGGCGACGATTCTCATaGCTATCTATGGTTGACTTCTCAAAAATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KLFFHWLWRRFS*LSMVDFSKISG
Trigger: TCCTGAAATTTTTGAGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTAGTGTGACCTTTGCTTaGCTCTTTGTCTTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: LSHSLYMIHTHLFQLQICSVTFA*LFVFVN
Trigger: GTTCACAAAGACAAAGAGTCAAGCAAAGGTCACACT...ACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGTGTGACCTTTGCTTaGCTCTTTGTCTTTGTGAAC +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWSVTFA*LFVFVN
Trigger: GTTCACAAAGACAAAGAGTCAAGCAAAGGTCACACT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGACTTTGTGTCTAGTGTaGCCTTTGCTTGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWTLCLV*PLLDSL
Trigger: CAAAGAGTCAAGCAAAGGTCACACTAGACACAAAGT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGGTATTTCTGCACAGTaGTCTCTTTTTGGCACAATG +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHGISAQ*SLFGTM
Trigger: CATTGTGCCAAAAAGAGATCACTGTGCAGAAATACC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTGGTATTTCTGCACAGTaGTCTCTTTTTGGCACAATG +
Preference number: 4 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISGISAQ*SLFGTM
Trigger: CATTGTGCCAAAAAGAGATCACTGTGCAGAAATACC...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTGATGGAGGGTTTAACTaGAAGCTTGCTTGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISDGGFN*KLACCN
Trigger: ATTGCAACAAGCAAGCTTTCAGTTAAACCCTCCATC...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGTGAGTTACAAAACTTaGCTCACTGTCTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHVSYKT*LTVFSL
Trigger: GAGACTGAAGACAGTGAGTCAAGTTTTGTAACTCAC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTGTGAGTTACAAAACTTaGCTCACTGTCTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISVSYKT*LTVFSL
Trigger: GAGACTGAAGACAGTGAGTCAAGTTTTGTAACTCAC...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACCAATTTCCATGGGATaGGGTAGACTAATTTTTGAG +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTPISMG*GRLIFE
Trigger: CTCAAAAATTAGTCTACCTCATCCCATGGAAATTGG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGCGACGATTCTCATTGCTATCTATGGTTGACTTCTCAAAAATTTCAGGACTTAAGAATTACAAACAACTaGTGGATGCAAATCATCTCG +
Preference number: 4 (lower is better)
Translates to: GDDSHCYLWLTSQKFQDLRITNN*WMQIIS
Trigger: CGAGATGATTTGCATCCATCAGTTGTTTGTAATTCT...TAAGTCCTGAAATTTTTGAGAAGTCAACCATAGATAGCAATGAGAATCGTCGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCCCATGCTATTTGTTTaGTTGGACTTCTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWPMLFV*LDFSRK
Trigger: CTTCCTTGAGAAGTCCAATCAAACAAATAGCATGGG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCCCATGCTATTTGTTTaGTTGGACTTCTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHPMLFV*LDFSRK
Trigger: CTTCCTTGAGAAGTCCAATCAAACAAATAGCATGGG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGCCATTTTTAGATTGTaGAGGAGAGCTAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTAIFRL*RRASRS
Trigger: AGATCTACTAGCTCTCCTTCACAATCTAAAAATGGC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCCTTAGGGCTATTACTTaGCCCTTTATTGACAACTCC +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSLRAIT*PFIDNS
Trigger: GGAGTTGTCAATAAAGGGTCAAGTAATAGCCCTAAG...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCTTAGGGCTATTACTTaGCCCTTTATTGACAACTCC +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWLRAIT*PFIDNS
Trigger: GGAGTTGTCAATAAAGGGTCAAGTAATAGCCCTAAG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAACTATGAAAGCAAAGTaGTTCACATTTCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKTMKAK*FTFPSS
Trigger: AGAACTGGGAAATGTGAATCACTTTGCTTTCATAGT...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATAGAAGTTTTCTCTGTATaGTTGGTGTACTATGAAAGC +
Preference number: 4 (lower is better)
Translates to: LCSCATSFSYTRINSLLIEVFSV*LVYYES
Trigger: GCTTTCATAGTACACCAATCATACAGAGAAAACTTC...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAACTCACTCATTGTATATaGTCCATACTCATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKLTHCI*SILISF
Trigger: GAAAGAGATGAGTATGGATCATATACAATGAGTGAG...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGGTACAGCCAAATTTaGACTCATCATACTTTCCCA +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTRYSQI*THHTFP
Trigger: TGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACTTGTAAGCCTTCATTaGCTGCTTCACCATAAATCT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTLVSLH*LLHHKS
Trigger: AGATTTATGGTGAAGCAGTCAATGAAGGCTTACAAG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAATACTGGGTCCTTCTaGTCCAGTGTTTCATACATG +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWNTGSF*SSVSYM
Trigger: CATGTATGAAACACTGGATCAGAAGGACCCAGTATT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCAATACTGGGTCCTTCTaGTCCAGTGTTTCATACATG +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSNTGSF*SSVSYM
Trigger: CATGTATGAAACACTGGATCAGAAGGACCCAGTATT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGGCAGGAATCTCTTCTaGCTGTTTCTATTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSGRNLF*LFLFLL
Trigger: CAAAAGGAATAGAAACAGTCAGAAGAGATTCCTGCC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAATCCTTGGTAATTCATaGTACCAGCTGAAGACATCA +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTILGNS*YQLKTS
Trigger: TGATGTCTTCAGCTGGTATCATGAATTACCAAGGAT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAACATCCTTGACTCGATaGAAGTTAAAAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTTSLTR*KLKSTM
Trigger: CATGGTGCTTTTTAACTTTCATCGAGTCAAGGATGT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGTACATTGTAAGAAGTaGGCTATTCAGAGATCAACA +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKVHCKK*AIQRST
Trigger: TGTTGATCTCTGAATAGCTCACTTCTTACAATGTAC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGGTACATTGTAAGAAGTaGGCTATTCAGAGATCAACA +
Preference number: 4 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQVHCKK*AIQRST
Trigger: TGTTGATCTCTGAATAGCTCACTTCTTACAATGTAC...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCGAAGTAACACGTCTTaGTACAGACAGTTCAAGGAA +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWRSNTS*YRQFKE
Trigger: TTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGAGGTAAGGAAAGATaGCATGTAGATGAAGACATG +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTRGKER*HVDEDM
Trigger: CATGTCTTCATCTACATGGCATCTTTCCTTACCTCT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTTCTGTCGATACTGAATaGCATCTGAGAAAGATAGCT +
Preference number: 4 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSSVDTE*HLRKIA
Trigger: AGCTATCTTTCTCAGATGGCATTCAGTATCGACAGA...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTATTATGGCTCCGCTTTaGAAAAGTTCACATATCCTT +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFIMAPL*KSSHIL
Trigger: AAGGATATGTGAACTTTTGCAAAGCGGAGCCATAAT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTATTACTTTTCCTTCTTaGTTTTCGGAACTTGACAGC +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFITFPS*FSELDS
Trigger: GCTGTCAAGTTCCGAAAAGCAAGAAGGAAAAGTAAT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAATTACTTTTCCTTCTTaGTTTTCGGAACTTGACAGC +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKITFPS*FSELDS
Trigger: GCTGTCAAGTTCCGAAAAGCAAGAAGGAAAAGTAAT...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGCAGGATCCAGTTGCATaGAATGTATTACTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQQDPVA*NVLLFL
Trigger: AAGGAAAAGTAATACATTGCATGCAACTGGATCCTG...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAACAGGATCCAGTTGCATaGAATGTATTACTTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKQDPVA*NVLLFL
Trigger: AAGGAAAAGTAATACATTGCATGCAACTGGATCCTG...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAACTTGCAGGATCCAGTTaGATGCAATGTATTACTTTT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKLAGSS*MQCITF
Trigger: AAAAGTAATACATTGCATGCAACTGGATCCTGCAAG...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACATTTTTCACTTTCTGTTaGTGGCACAAACCTGTGATC +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTFFTFC*WHKPVI
Trigger: GATCACAGGTTTGTGCCAGCAACAGAAAGTGAAAAA...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAAATGTTCTTCAATATTaGTGTCCCATCTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTNVLQY*CPISGT
Trigger: TGTCCCAGAGATGGGACAGCAATATTGAAGAACATT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATAACCGGGATGGTTTATTaGCAGGTTGTAATTTATATG +
Preference number: 4 (lower is better)
Translates to: LCSCATSFSYTRINSLLITGMVY*QVVIYM
Trigger: CATATAAATTACAACCTGGCAATAAACCATCCCGGT...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACCGGGATGGTTTATTaGCAGGTTGTAATTTATATG +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFTGMVY*QVVIYM
Trigger: CATATAAATTACAACCTGGCAATAAACCATCCCGGT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATAAGTCTCCTGATGACCTaGAAGTTTCCTTTTATTCAA +
Preference number: 4 (lower is better)
Translates to: LCSCATSFSYTRINSLLISLLMT*KFPFIQ
Trigger: TTGAATAAAAGGAAACTTGCAGGTCATCAGGAGACT...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAAATTTATGGGACTTGTaGTTCTCTCAGAAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNENLWDL*FSQKEN
Trigger: GTTTTCTTTCTGAGAGAAGCACAAGTCCCATAAATT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TCATTGATTCCACACGGTACTGTGAACCCCTTGTCAGTACATGTAAAAACTGAAAATTTATGGGACTTGTaGTTCTCTCAGAAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SLIPHGTVNPLSVHVKTENLWDL*FSQKEN
Trigger: GTTTTCTTTCTGAGAGAAGCACAAGTCCCATAAATT...TTCAGTTTTTACATGTACTGACAAGGGGTTCACAGTACCGTGTGGAATCAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCATTGCCTCTTTTTCTaGAGCAGCCATGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHHCLFF*SSHDFF
Trigger: GAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGGAACAAGTTTCACTGTaGTTTGACTGTTCCGCTATG +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWEQVSL*FDCSAM
Trigger: CATAGCGGAACAGTCAAAGCACAGTGAAACTTGTTC...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGGCGACGATTCTCATTaGTATCTATGGTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSGDDSH*YLWLTS
Trigger: AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGGCGACGATTCTCATTaGTATCTATGGTTGACTTCT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHGDDSH*YLWLTS
Trigger: AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCCTCAGCCAGATCATTTaGAAGTCGAGTTTCTACCAT +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSLSQII*KSSFYH
Trigger: ATGGTAGAAACTCGACTTGCAAATGATCTGGCTGAG...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCTCAGCCAGATCATTTaGAAGTCGAGTTTCTACCAT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHLSQII*KSSFYH
Trigger: ATGGTAGAAACTCGACTTGCAAATGATCTGGCTGAG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TCTGATCAGCTGGGACAAACTGACTTCCAGAATAAAAGCTACAAAATCCAGTCTCTCATCTCTTTCAGCTaGAAATCTGTTCTCAATTTT +
Preference number: 4 (lower is better)
Translates to: SDQLGQTDFQNKSYKIQSLISFS*KSVLNF
Trigger: AAAATTGAGAACAGATTTGCAGCTGAAAGAGATGAG...AGACTGGATTTTGTAGCTTTTATTCTGGAAGTCAGTTTGTCCCAGCTGATCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCCAATCTTAAAAGACTaGTCCTTAGTGGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWPILKD*SLVAPF
Trigger: GAAAGGAGCCACTAAGGAGCAGTCTTTTAAGATTGG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGAACCTGTACAGTTCTTaGATATCTTTACAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQNLYSS*ISLQVA
Trigger: AGCAACTTGTAAAGATATGCAAGAACTGTACAGGTT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTATTTTTAAAGTATTaGAACAGGCCCACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNELFLKY*NRPTGL
Trigger: CAAACCTGTGGGCCTGTTGCAATACTTTAAAAATAA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTTATTTTTAAAGTATTaGAACAGGCCCACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLFLKY*NRPTGL
Trigger: CAAACCTGTGGGCCTGTTGCAATACTTTAAAAATAA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGAACTTCTACCATATTaGCTGGTGTACACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHELLPY*LVYTEA
Trigger: TGCTTCAGTGTACACCAGCCAATATGGTAGAAGTTC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGGAACTTCTACCATATTaGCTGGTGTACACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWELLPY*LVYTEA
Trigger: TGCTTCAGTGTACACCAGCCAATATGGTAGAAGTTC...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGTGGAGAAGAATTTATaGGACTTGTGCTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSVEKNL*DLCFSQ
Trigger: CTGAGAGAAGCACAAGTCCCATAAATTCTTCTCCAC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACTTAGGGGTATATGCTTaGTCCAGCTTTGATTCTAGG +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHLGVYA*SSFDSR
Trigger: CCTAGAATCAAAGCTGGACCAAGCATATACCCCTAA...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCTTAGGGGTATATGCTTaGTCCAGCTTTGATTCTAGG +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSLGVYA*SSFDSR
Trigger: CCTAGAATCAAAGCTGGACCAAGCATATACCCCTAA...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATGCTATTTGTTTGATTaGACTTCTCAAGGAAGTTAC +
Preference number: 4 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNECYLFD*TSQGSY
Trigger: GTAACTTCCTTGAGAAGTCCAATCAAACAAATAGCA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATTTGTTTTGTACTTCTaGGAGTTCGAGGTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKFVLYF*EFEVFL
Trigger: CAAGAAAACCTCGAACTCCCAGAAGTACAAAACAAA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATATTTGTTTTGTACTTCTaGGAGTTCGAGGTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: LCSCATSFSYTRINSLLIFVLYF*EFEVFL
Trigger: CAAGAAAACCTCGAACTCCCAGAAGTACAAAACAAA...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACATGAGGCTGAGTCTGTaGTATGATGCTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHMRLSL*YDACLH
Trigger: ATGAAGACAAGCATCATACCACAGACTCAGCCTCAT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGATGAGGCTGAGTCTGTaGTATGATGCTTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWMRLSL*YDACLH
Trigger: ATGAAGACAAGCATCATACCACAGACTCAGCCTCAT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACTTTTTCCACTGGTTGTaGCGACGATTCTCATTGCTA +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHFFHWL*RRFSLL
Trigger: TAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAA...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCAAGCTATTTTTCCACTaGTTGTGGCGACGATTCTCA +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSKLFFH*LWRRFS
Trigger: TGAGAATCGTCGCCACAACCAGTGGAAAAATAGCTT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAAGCTATTTTTCCACTaGTTGTGGCGACGATTCTCA +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHKLFFH*LWRRFS
Trigger: TGAGAATCGTCGCCACAACCAGTGGAAAAATAGCTT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAAGCTATTTTTCCACTaGTTGTGGCGACGATTCTCA +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWKLFFH*LWRRFS
Trigger: TGAGAATCGTCGCCACAACCAGTGGAAAAATAGCTT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTAGGATTACTGCAAAATaGTTCCTGGTAAATAGTCTC +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFRITAK*FLVNSL
Trigger: GAGACTATTTACCAGGAACCATTTTGCAGTAATCCT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTTTTACAACTCCAGTTaGCTTGGTTTTAGGCAGTTT +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFFYNSS*LGFRQF
Trigger: AAACTGCCTAAAACCAAGCCAACTGGAGTTGTAAAA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
38% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTTTGACTACATCCCGTaGTTGGTGCTTGTAAAGCAA +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWFDYIP*LVLVKQ
Trigger: TTGCTTTACAAGCACCAACCACGGGATGTAGTCAAA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAAGAAGTTTCTTTCTGTaGGGTATTTACTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKRSFFL*GIYCCK
Trigger: TTTGCAGCAGTAAATACCCCACAGAAAGAAACTTCT...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACATGGCACACAAGCTCCTaGTTTATAAGAAAAACTTCC +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTWHTSS*FIRKTS
Trigger: GGAAGTTTTTCTTATAAACCAGGAGCTTGTGTGCCA...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGGAGATATGGTGCCTTaGACAATTCTCTATTTACTC +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTGDMVP*TILYLL
Trigger: GAGTAAATAGAGAATTGTCCAAGGCACCATATCTCC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTTGCTTTTCGGAACTTaGCAGCAGCCAGATTTATTA +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWLLFGT*QQPDLL
Trigger: TAATAAATCTGGCTGCTGTCAAGTTCCGAAAAGCAA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CGGCCAACAATATTTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCATTGCTTTTCGGAACTTaGCAGCAGCCAGATTTATTA +
Preference number: 4 (lower is better)
Translates to: RPTIFISLIVYDPYSSLSLLFGT*QQPDLL
Trigger: TAATAAATCTGGCTGCTGTCAAGTTCCGAAAAGCAA...TGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAAATATTGTTGGCCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTGACTCTTTGTCTTTGTaGACTTCTACCATATTGGCT +
Preference number: 4 (lower is better)
Translates to: LSHSLYMIHTHLFQLQICDSLSL*TSTILA
Trigger: AGCCAATATGGTAGAAGTTCACAAAGACAAAGAGTC...ACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGACTCTTTGTCTTTGTaGACTTCTACCATATTGGCT +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSDSLSL*TSTILA
Trigger: AGCCAATATGGTAGAAGTTCACAAAGACAAAGAGTC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGTATTCTCGTTAGGGTaGCGGTGCATATGTATAAAA +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHVFSLG*RCICIK
Trigger: TTTTATACATATGCACCGTCACCCTAACGAGAATAC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGTATTCTCGTTAGGGTaGCGGTGCATATGTATAAAA +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSVFSLG*RCICIK
Trigger: TTTTATACATATGCACCGTCACCCTAACGAGAATAC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCCAATTTCCATGGGATaGGGTAGACTAATTTTTGAG +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHPISMG*GRLIFE
Trigger: CTCAAAAATTAGTCTACCTCATCCCATGGAAATTGG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACATGTTTAAAAAGTAGTTaGGAGCCTCCAGAACTACTT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTCLKSS*EPPELL
Trigger: AAGTAGTTCTGGAGGCTCTCAACTACTTTTTAAACA...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTTGTTTAAAAAGTAGTTaGGAGCCTCCAGAACTACTT +
Preference number: 4 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSCLKSS*EPPELL
Trigger: AAGTAGTTCTGGAGGCTCTCAACTACTTTTTAAACA...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGCCATTTTTAGATTGTaGAGGAGAGCTAGTAGATCT +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSAIFRL*RRASRS
Trigger: AGATCTACTAGCTCTCCTTCACAATCTAAAAATGGC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGTTATCAAACCAGTCTaGCAAGACTCGAAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHVIKPV*QDSKGK
Trigger: TTTACCTTTCGAGTCTTGTCAGACTGGTTTGATAAC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGGTTATCAAACCAGTCTaGCAAGACTCGAAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWVIKPV*QDSKGK
Trigger: TTTACCTTTCGAGTCTTGTCAGACTGGTTTGATAAC...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTACACCTTTTCTTACTaGAGGCTTGACAAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWYTFSY*RLDKSY
Trigger: GTAGCTTTTGTCAAGCCTTCAGTAAGAAAAGGTGTA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCATCCTTGGTAATTCATaGTACCAGCTGAAGACATCA +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSILGNS*YQLKTS
Trigger: TGATGTCTTCAGCTGGTATCATGAATTACCAAGGAT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTATCCTTGGTAATTCATaGTACCAGCTGAAGACATCA +
Preference number: 4 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISILGNS*YQLKTS
Trigger: TGATGTCTTCAGCTGGTATCATGAATTACCAAGGAT...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCACATCCTTGACTCGATaGAAGTTAAAAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSTSLTR*KLKSTM
Trigger: CATGGTGCTTTTTAACTTTCATCGAGTCAAGGATGT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCAGAGGTAAGGAAAGATaGCATGTAGATGAAGACATG +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSRGKER*HVDEDM
Trigger: CATGTCTTCATCTACATGGCATCTTTCCTTACCTCT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTCTGTCGATACTGAATaGCATCTGAGAAAGATAGCT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWSVDTE*HLRKIA
Trigger: AGCTATCTTTCTCAGATGGCATTCAGTATCGACAGA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCTGATAAATGATTCTTaGAGGATCCAGTTGCATGCA +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHLINDS*RIQLHA
Trigger: TGCATGCAACTGGATCCTGCAAGAATCATTTATCAG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTTTTTCACTTTCTGTTaGTGGCACAAACCTGTGATC +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWFFTFC*WHKPVI
Trigger: GATCACAGGTTTGTGCCAGCAACAGAAAGTGAAAAA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTCAATTTTTTTCACTTTCTGTTaGTGGCACAAACCTGTGATC +
Preference number: 4 (lower is better)
Translates to: LIVYDPYSSLSAANLFSIFFTFC*WHKPVI
Trigger: GATCACAGGTTTGTGCCAGCAACAGAAAGTGAAAAA...AATTGAGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAG
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACTTCTGTGGGTATTTCTaGACAGTGATCTCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHFCGYF*TVISFW
Trigger: CCAAAAAGAGATCACTGTGCAGAAATACCCACAGAA...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACTGAATGAACAGTACTaGTTAAAGATCCAGGGTATT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTLNEQY*LKIQGI
Trigger: AATACCCTGGATCTTTAAGCAGTACTGTTCATTCAG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTACCGGGATGGTTTATTaGCAGGTTGTAATTTATATG +
Preference number: 4 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSTGMVY*QVVIYM
Trigger: CATATAAATTACAACCTGGCAATAAACCATCCCGGT...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGTCTCCTGATGACCTaGAAGTTTCCTTTTATTCAA +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTSLLMT*KFPFIQ
Trigger: TTGAATAAAAGGAAACTTGCAGGTCATCAGGAGACT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CGGCCAACAATATTTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCATATAGTCCAAAGGACTaGTCAGTTTCTAACGTTCCA +
Preference number: 4 (lower is better)
Translates to: RPTIFISLIVYDPYSSLSYSPKD*SVSNVP
Trigger: TGGAACGTTAGAAACTGAGCAGTCCTTTGGACTATA...TGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAAATATTGTTGGCCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTAATTTATGGGACTTGTaGTTCTCTCAGAAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFNLWDL*FSQKEN
Trigger: GTTTTCTTTCTGAGAGAAGCACAAGTCCCATAAATT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCCTTAATCTGTGCTCTTaGGCGACTAGTTTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSLNLCS*ATSFSY
Trigger: ATAGGAAAAACTAGTCGCGCAAGAGCACAGATTAAG...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCCAAACAACTGATGGATaGAAATCATCTCGTGAACTG +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSQTTDG*KSSREL
Trigger: CAGTTCACGAGATGATTTGCATCCATCAGTTGTTTG...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTGTCTTGTGTAGTATTTaGATTTTGTGCTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSVLCSI*ILCFLL
Trigger: CAGCAGAAAGCACAAAATGCAAATACTACACAAGAC...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACATCAGAAGGATTACTaGAAAATGGTTCCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTHQKDY*KMVPGK
Trigger: TTTACCAGGAACCATTTTGCAGTAATCCTTCTGATG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCTGTGGGGTATTTACTaGTGCAAATTGATTCTTTGC +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWLWGIY*CKLILC
Trigger: GCAAAGAATCAATTTGCAGCAGTAAATACCCCACAG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCCTGTGGGGTATTTACTaGTGCAAATTGATTCTTTGC +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSLWGIY*CKLILC
Trigger: GCAAAGAATCAATTTGCAGCAGTAAATACCCCACAG...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCTCATCTCTTTCAGCTaGAAATCTGTTCTCAATTTT +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFLISFS*KSVLNF
Trigger: AAAATTGAGAACAGATTTGCAGCTGAAAGAGATGAG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGGACATTTACTACAGATaGCATGCTGAGTTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWDIYYR*HAELGH
Trigger: ATGACCTAACTCAGCATGGCATCTGTAGTAAATGTC...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGACATTTACTACAGATaGCATGCTGAGTTAGGTCAT +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSDIYYR*HAELGH
Trigger: ATGACCTAACTCAGCATGGCATCTGTAGTAAATGTC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAAACCTGTACAGTTCTTaGATATCTTTACAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKNLYSS*ISLQVA
Trigger: AGCAACTTGTAAAGATATGCAAGAACTGTACAGGTT...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATAAACCTGTACAGTTCTTaGATATCTTTACAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: LCSCATSFSYTRINSLLINLYSS*ISLQVA
Trigger: AGCAACTTGTAAAGATATGCAAGAACTGTACAGGTT...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGAACCTGTACAGTTCTTaGATATCTTTACAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQNLYSS*ISLQVA
Trigger: AGCAACTTGTAAAGATATGCAAGAACTGTACAGGTT...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTTCCATAACCATCGTATaGCACATAGAGGTAAGGAAA +
Preference number: 4 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISSITIV*HIEVRK
Trigger: TTTCCTTACCTCTATGTGCCATACGATGGTTATGGA...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACTCAGTTGAACTTCTGTaGGTATTTCTGCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHSVELL*VFLHSD
Trigger: ATCACTGTGCAGAAATACCCACAGAAGTTCAACTGA...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp CTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTCAATTTCAGTTGAACTTCTGTaGGTATTTCTGCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: LIVYDPYSSLSAANLFSISVELL*VFLHSD
Trigger: ATCACTGTGCAGAAATACCCACAGAAGTTCAACTGA...AATTGAGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCTCAGTTGAACTTCTGTaGGTATTTCTGCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSSVELL*VFLHSD
Trigger: ATCACTGTGCAGAAATACCCACAGAAGTTCAACTGA...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTTCACAGGAAGATACTaGGAGGATCTCTTTCTTACT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWFTGRY*EDLFLT
Trigger: AGTAAGAAAGAGATCCTCCCAGTATCTTCCTGTGAA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAATCATCTCGTGAACTaGGGAATGTCTGCAAATCTA +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHNHLVN*GMSANL
Trigger: TAGATTTGCAGACATTCCCCAGTTCACGAGATGATT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATGCTATTTGTTTGATTaGACTTCTCAAGGAAGTTAC +
Preference number: 4 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKCYLFD*TSQGSY
Trigger: GTAACTTCCTTGAGAAGTCCAATCAAACAAATAGCA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTGCTATTTGTTTGATTaGACTTCTCAAGGAAGTTAC +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFCYLFD*TSQGSY
Trigger: GTAACTTCCTTGAGAAGTCCAATCAAACAAATAGCA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTTCTATAGCTTGTCCTaGAAAAAGATCCTGAACAGC +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWFYSLS*KKILNS
Trigger: GCTGTTCAGGATCTTTTTCCAGGACAAGCTATAGAA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGGATTACTGCAAAATaGTTCCTGGTAAATAGTCTC +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTRITAK*FLVNSL
Trigger: GAGACTATTTACCAGGAACCATTTTGCAGTAATCCT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGTTCGTATTCTTCTTTaGCTTGAAGCCACACTTGAA +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSVRILL*LEATLE
Trigger: TTCAAGTGTGGCTTCAAGCCAAAGAAGAATACGAAC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGTTCGTATTCTTCTTTaGCTTGAAGCCACACTTGAA +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHVRILL*LEATLE
Trigger: TTCAAGTGTGGCTTCAAGCCAAAGAAGAATACGAAC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACACTTACATCCATTTTTaGAGGCACTACAGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHTYIHF*RHYRFV
Trigger: GACAAACCTGTAGTGCCTCCAAAAATGGATGTAAGT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCAGTGGGGAGTATACATaGACTTACATCCATTTTTGG +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSSGEYT*TYIHFW
Trigger: CCAAAAATGGATGTAAGTCCATGTATACTCCCCACT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGTTCCAAGGTCTCTCTaGCTTTGTGAACAATACTAT +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSVPRSL*LCEQYY
Trigger: ATAGTATTGTTCACAAAGCCAGAGAGACCTTGGAAC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTGTTCCAAGGTCTCTCTaGCTTTGTGAACAATACTAT +
Preference number: 4 (lower is better)
Translates to: LSHSLYMIHTHLFQLQICVPRSL*LCEQYY
Trigger: ATAGTATTGTTCACAAAGCCAGAGAGACCTTGGAAC...ACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGTTCCAAGGTCTCTCTaGCTTTGTGAACAATACTAT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHVPRSL*LCEQYY
Trigger: ATAGTATTGTTCACAAAGCCAGAGAGACCTTGGAAC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTAAACTTCAATTTCACTaGTTTAGGATTGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFKLQFH*FRIGSS
Trigger: ACTGCTACCAATCCTAAACCAGTGAAATTGAAGTTT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCTGGCACACAAGCTCCTaGTTTATAAGAAAAACTTCC +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSWHTSS*FIRKTS
Trigger: GGAAGTTTTTCTTATAAACCAGGAGCTTGTGTGCCA...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCTCAAAATGCTACACGTaGTACTACTGTTTGCACAGT +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSSKCYT*YYCLHS
Trigger: ACTGTGCAAACAGTAGTACCACGTGTAGCATTTTGA...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCTTCGTTTTCGGGATTTaGGAGTTCCATCTAAACTTT +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSFVFGI*EFHLNF
Trigger: AAAGTTTAGATGGAACTCTCAAATCCCGAAAACGAA...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTTCGTTTTCGGGATTTaGGAGTTCCATCTAAACTTT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWFVFGI*EFHLNF
Trigger: AAAGTTTAGATGGAACTCTCAAATCCCGAAAACGAA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTGTTTAAAAAGTAGTTaGGAGCCTCCAGAACTACTT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWCLKSS*EPPELL
Trigger: AAGTAGTTCTGGAGGCTCTCAACTACTTTTTAAACA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGAATTACAAACAACTaGTGGATGCAAATCATCTCG +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHRITNN*WMQIIS
Trigger: CGAGATGATTTGCATCCATCAGTTGTTTGTAATTCT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACACTATGAAAGCAAAGTaGTTCACATTTCCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHTMKAK*FTFPSS
Trigger: AGAACTGGGAAATGTGAATCACTTTGCTTTCATAGT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR TCA 90 bp CGGCCAACAATATTTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCACTCACTCATTGTATATaGTCCATACTCATCTCTTTC +
Preference number: 4 (lower is better)
Translates to: RPTIFISLIVYDPYSSLSLTHCI*SILISF
Trigger: GAAAGAGATGAGTATGGATCATATACAATGAGTGAG...TGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAAATATTGTTGGCCG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR TCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGGTACATTGTAAGAAGTaGGCTATTCAGAGATCAACA +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWVHCKK*AIQRST
Trigger: TGTTGATCTCTGAATAGCTCACTTCTTACAATGTAC...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTATTATGGCTCCGCTTTaGAAAAGTTCACATATCCTT +
Preference number: 4 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISIMAPL*KSSHIL
Trigger: AAGGATATGTGAACTTTTGCAAAGCGGAGCCATAAT...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGATTATGGCTCCGCTTTaGAAAAGTTCACATATCCTT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWIMAPL*KSSHIL
Trigger: AAGGATATGTGAACTTTTGCAAAGCGGAGCCATAAT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCTTGCAGGATCCAGTTaGATGCAATGTATTACTTTT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWLAGSS*MQCITF
Trigger: AAAAGTAATACATTGCATGCAACTGGATCCTGCAAG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCTGAATGAACAGTACTaGTTAAAGATCCAGGGTATT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHLNEQY*LKIQGI
Trigger: AATACCCTGGATCTTTAAGCAGTACTGTTCATTCAG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTCTCCTGATGACCTaGAAGTTTCCTTTTATTCAA +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHSLLMT*KFPFIQ
Trigger: TTGAATAAAAGGAAACTTGCAGGTCATCAGGAGACT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCCATCAGAAGGATTACTaGAAAATGGTTCCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSHQKDY*KMVPGK
Trigger: TTTACCAGGAACCATTTTGCAGTAATCCTTCTGATG...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CGGCCAACAATATTTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCACATCAGAAGGATTACTaGAAAATGGTTCCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: RPTIFISLIVYDPYSSLSHQKDY*KMVPGK
Trigger: TTTACCAGGAACCATTTTGCAGTAATCCTTCTGATG...TGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAAATATTGTTGGCCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAAACCTGTACAGTTCTTaGATATCTTTACAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTNLYSS*ISLQVA
Trigger: AGCAACTTGTAAAGATATGCAAGAACTGTACAGGTT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCAATTATTAGGCATTTaGCTTTCCTCTGAAGCTGTA +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHQLLGI*LSSEAV
Trigger: TACAGCTTCAGAGGAAAGCCAAATGCCTAATAATTG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTTTGTTTTGTACTTCTaGGAGTTCGAGGTTTTCTTG +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWFVLYF*EFEVFL
Trigger: CAAGAAAACCTCGAACTCCCAGAAGTACAAAACAAA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCTCCATTTAATGCTTTaGAATCTGGGGATATTGGTT +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWLHLML*NLGILV
Trigger: AACCAATATCCCCAGATTCCAAAGCATTAAATGGAG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCCTCCATTTAATGCTTTaGAATCTGGGGATATTGGTT +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSLHLML*NLGILV
Trigger: AACCAATATCCCCAGATTCCAAAGCATTAAATGGAG...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCAGAAGTTTCTTTCTGTaGGGTATTTACTGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSRSFFL*GIYCCK
Trigger: TTTGCAGCAGTAAATACCCCACAGAAAGAAACTTCT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
3UTR CAA 72 bp TCAAAATGCTACACGTGGTACTACTGTTTGCACAGTTaGATCAAAATAACGATCTACTTTGAGTCAAGCAAA +
Preference number: 4 (lower is better)
Translates to: SKCYTWYYCLHS*IKITIYFESSK
Trigger: TTTGCTTGACTCAAAGTAGATCGTTATTTTGATCAAACTGTGCAAACAGTAGTACCACGTGTAGCATTTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAATTTATGGGACTTGTaGTTCTCTCAGAAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWNLWDL*FSQKEN
Trigger: GTTTTCTTTCTGAGAGAAGCACAAGTCCCATAAATT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCTCATCTCTTTCAGCTaGAAATCTGTTCTCAATTTT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHLISFS*KSVLNF
Trigger: AAAATTGAGAACAGATTTGCAGCTGAAAGAGATGAG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR GCA 90 bp CTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTCAATTTTATTTTTAAAGTATTaGAACAGGCCCACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: LIVYDPYSSLSAANLFSILFLKY*NRPTGL
Trigger: CAAACCTGTGGGCCTGTTGCAATACTTTAAAAATAA...AATTGAGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR GCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACTTATTTTTAAAGTATTaGAACAGGCCCACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHLFLKY*NRPTGL
Trigger: CAAACCTGTGGGCCTGTTGCAATACTTTAAAAATAA...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CCA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAAACTTCAATTTCACTaGTTTAGGATTGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHKLQFH*FRIGSS
Trigger: ACTGCTACCAATCCTAAACCAGTGAAATTGAAGTTT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS GCA 90 bp ACACAGAGGCACCTCGAGGAGCGGCGGGCGGGGCGGTGTAGGCGCTaGTGCCGCCGCCTCCTCAGGAGCACCCGGCAAGGGGCCGCAGGA +
Preference number: 5 (lower is better)
Translates to: TQRHLEERRAGRCRR*CRRLLRSTRQGAAG
Trigger: TCCTGCGGCCCCTTGCCGGGTGCTCCTGAGGAGGCGGCGGCAGCAGCGCCTACACCGCCCCGCCCGCCGCTCCTCGAGGTGCCTCTGTGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS GCA 90 bp GGGGCCGCAGGAGAGAAGCCCTCGAGCTTTCGTCGGTGCTGGTGCTaGCGCCACTGCCGCCACCGCCGGGAATCACACGGGCTCCTCGGT +
Preference number: 5 (lower is better)
Translates to: GAAGEKPSSFRRCWC*RHCRHRRESHGLLG
Trigger: ACCGAGGAGCCCGTGTGATTCCCGGCGGTGGCGGCAGTGGCGGCAGCACCAGCACCGACGAAAGCTCGAGGGCTTCTCTCCTGCGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS GCA 90 bp ACCCGGCAAGGGGCCGCAGGAGAGAAGCCCTCGAGCTTTCGTCGGTaGTGGTGCTGCCGCCACTGCCGCCACCGCCGGGAATCACACGGG +
Preference number: 5 (lower is better)
Translates to: TRQGAAGEKPSSFRR*WCCRHCRHRRESHG
Trigger: CCCGTGTGATTCCCGGCGGTGGCGGCAGTGGCGGCAGCACCAGCACCGACGAAAGCTCGAGGGCTTCTCTCCTGCGGCCCCTTGCCGGGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS CCA 90 bp CGGCAAGGGGCCGCAGGAGAGAAGCCCTCGAGCTTTCGTCGGTGCTaGTGCTGCCGCCACTGCCGCCACCGCCGGGAATCACACGGGCTC +
Preference number: 5 (lower is better)
Translates to: RQGAAGEKPSSFRRC*CCRHCRHRRESHGL
Trigger: GAGCCCGTGTGATTCCCGGCGGTGGCGGCAGTGGCGGCAGCACCAGCACCGACGAAAGCTCGAGGGCTTCTCTCCTGCGGCCCCTTGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS GCA 90 bp GGAGAGAAGCCCTCGAGCTTTCGTCGGTGCTGGTGCTGCCGCCACTaGCGCCACCGCCGGGAATCACACGGGCTCCTCGGTCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GEKPSSFRRCWCCRH*RHRRESHGLLGPRL
Trigger: CAGCCTGGGACCGAGGAGCCCGTGTGATTCCCGGCGGTGGCGGCAGTGGCGGCAGCACCAGCACCGACGAAAGCTCGAGGGCTTCTCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS GCA 90 bp GCCGGGAATCACACGGGCTCCTCGGTCCCAGGCTGCAGCTCTTGTTaGCATGATGATGATGTCACGGACGCAACCACTCGCCGACCGCCA +
Preference number: 5 (lower is better)
Translates to: AGNHTGSSVPGCSSC*HDDDVTDATTRRPP
Trigger: TGGCGGTCGGCGAGTGGTTGCGTCCGTGACATCATCATCATGGCAACAAGAGCTGCAGCCTGGGACCGAGGAGCCCGTGTGATTCCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358835.7
ENST00000422377.5
ENST00000435970.5
CDS GCA 90 bp ACTGCCGCCACCGCCGGGAATCACACGGGCTCCTCGGTCCCAGGCTaGAGCTCTTGTTGCCATGATGATGATGTCACGGACGCAACCACT +
Preference number: 5 (lower is better)
Translates to: TAATAGNHTGSSVPG*SSCCHDDDVTDATT
Trigger: AGTGGTTGCGTCCGTGACATCATCATCATGGCAACAAGAGCTGCAGCCTGGGACCGAGGAGCCCGTGTGATTCCCGGCGGTGGCGGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358835.7
ENST00000422377.5
ENST00000435970.5
CDS GCA 90 bp GCTGCTGTCCATAACCATCGTATGGCACATAGAGGTAAGGAAAGATaGCATGTAGATGAAGACATGTCTTCTGACCTGCCGGGGTCGCTC +
Preference number: 5 (lower is better)
Translates to: AAVHNHRMAHRGKER*HVDEDMSSDLPGSL
Trigger: GAGCGACCCCGGCAGGTCAGAAGACATGTCTTCATCTACATGGCATCTTTCCTTACCTCTATGTGCCATACGATGGTTATGGACAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358835.7
ENST00000368802.8
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACCACCGGCACCTTCTaGACAGGGGCCTGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFTTGTF*TGAWVR
Trigger: CCTCACCCAGGCCCCTGTCAAGAAGGTGCCGGTGGT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTAGAGTTCGAGGTTTTCTaGGGGACGTTACCGATCGTG +
Preference number: 5 (lower is better)
Translates to: RQPFVRGNPRNASESHILEFEVF*GTLPIV
Trigger: CACGATCGGTAACGTCCCCAAGAAAACCTCGAACTC...TAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGGCTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TTTGCAAGTCGAGTTTCTACCATGAGGAGCCGTCCACCAATCTCCCTGGGCTTTTTATCAACATCCTCCTaGGTATGTGCTGTAGTGGGG +
Preference number: 5 (lower is better)
Translates to: FASRVSTMRSRPPISLGFLSTSS*VCAVVG
Trigger: CCCCACTACAGCACATACCAAGGAGGATGTTGATAA...AAAGCCCAGGGAGATTGGTGGACGGCTCCTCATGGTAGAAACTCGACTTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TTTGCAAGTCGAGTTTCTACCATGAGGAGCCGTCCACCAATCTCCCTGGGCTTTATGCTTGGTCCAGCTTaGATTCTAGGGAATTGCGAT +
Preference number: 5 (lower is better)
Translates to: FASRVSTMRSRPPISLGFMLGPA*ILGNCD
Trigger: ATCGCAATTCCCTAGAATCAAAGCTGGACCAAGCAT...AAAGCCCAGGGAGATTGGTGGACGGCTCCTCATGGTAGAAACTCGACTTGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGCAACTGGTGGCAGCATCTGACTTTCACTTGCAGTTTGACTACATCCCGTGGTTTCACTGGTTTAGGATaGGTAGCAGTTACAGCTTCG +
Preference number: 5 (lower is better)
Translates to: GNWWQHLTFTCSLTTSRGFTGLG*VAVTAS
Trigger: CGAAGCTGTAACTGCTACCAATCCTAAACCAGTGAA...ACCACGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGCTGCCACCAGTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGACCACCGGCACCTTCTaGACAGGGGCCTGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWTTGTF*TGAWVR
Trigger: CCTCACCCAGGCCCCTGTCAAGAAGGTGCCGGTGGT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACACCACCGGCACCTTCTaGACAGGGGCCTGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHTTGTF*TGAWVR
Trigger: CCTCACCCAGGCCCCTGTCAAGAAGGTGCCGGTGGT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCACCACCGGCACCTTCTaGACAGGGGCCTGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSTTGTF*TGAWVR
Trigger: CCTCACCCAGGCCCCTGTCAAGAAGGTGCCGGTGGT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTACCACCGGCACCTTCTaGACAGGGGCCTGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: LSHSLYMIHTHLFQLQICTTGTF*TGAWVR
Trigger: CCTCACCCAGGCCCCTGTCAAGAAGGTGCCGGTGGT...ACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGAGTTCGAGGTTTTCTaGGGGACGTTACCGATCGTG +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCEFEVF*GTLPIV
Trigger: CACGATCGGTAACGTCCCCAAGAAAACCTCGAACTC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTATCATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTGGCGGCTTGAAGCCACACTaGAACCAGTTGTCGACTTGG +
Preference number: 5 (lower is better)
Translates to: LSSSSSSFSGSLAEATGGGLKPH*NQLSTW
Trigger: CCAAGTCGACAACTGGTTCAAGTGTGGCTTCAAGCC...GCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAGCTGCAAATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACACTTTCACTTGCAGTTaGACTACATCCCGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: QLQICSQFCHLAPERSSDTFTCS*TTSRGW
Trigger: CCAACCACGGGATGTAGTCAAACTGCAAGTGAAAGT...GTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATTTGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAGCTGCAAATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACGCATCTGACTTTCACTaGCAGTTTGACTACATCCCG +
Preference number: 5 (lower is better)
Translates to: QLQICSQFCHLAPERSSDASDFH*QFDYIP
Trigger: CGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGC...GTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATTTGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CCAATGAAGGCAGCTCCTCTACTGGTGATGAGGGTCTATCATCTCCATTTAATGTGGAATCTGGGGATATaGGTTGTTGCCAAGGGGGAA +
Preference number: 5 (lower is better)
Translates to: PMKAAPLLVMRVYHLHLMWNLGI*VVAKGE
Trigger: TTCCCCCTTGGCAACAACCAATATCCCCAGATTCCA...CATTAAATGGAGATGATAGACCCTCATCACCAGTAGAGGAGCTGCCTTCATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TTTGCAAGTCGAGTTTCTACCATGAGGAGCCGTCCACCAATCTCCCTGGGCTTTGAGGTACAGCCAAATTaGAACTCATCATACTTTCCC +
Preference number: 5 (lower is better)
Translates to: FASRVSTMRSRPPISLGFEVQPN*NSSYFP
Trigger: GGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTC...AAAGCCCAGGGAGATTGGTGGACGGCTCCTCATGGTAGAAACTCGACTTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CCAATGAAGGCAGCTCCTCTACTGGTGATGAGGGTCTATCATCTCCATTTAATGTCCCGGATTTCTTGGTaGAGGATGACTGCAACATGC +
Preference number: 5 (lower is better)
Translates to: PMKAAPLLVMRVYHLHLMSRISW*RMTATC
Trigger: GCATGTTGCAGTCATCCTCAACCAAGAAATCCGGGA...CATTAAATGGAGATGATAGACCCTCATCACCAGTAGAGGAGCTGCCTTCATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAGCTGCAAATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACGCAGTGGAAGATGGATaGCCTAAAGCCACATTAAGT +
Preference number: 5 (lower is better)
Translates to: QLQICSQFCHLAPERSSDAVEDG*PKATLS
Trigger: ACTTAATGTGGCTTTAGGCAATCCATCTTCCACTGC...GTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATTTGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCAGGGTTTCCACCAATTaGAGCTTCAATGTCCAGACG +
Preference number: 5 (lower is better)
Translates to: SSDISQYLKRQPFVRGNPRVSTN*SFNVQT
Trigger: CGTCTGGACATTGAAGCTCAAATTGGTGGAAACCCT...GGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTAGCAGTAAAAGAGGTATaGGCTGAGTCAAGAGACTGT +
Preference number: 5 (lower is better)
Translates to: RQPFVRGNPRNASESHILAVKEV*AESRDC
Trigger: ACAGTCTCTTGACTCAGCCAATACCTCTTTTACTGC...TAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGGCTGCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAGAACCAGTTGTCGACTaGGGGCACATTTGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: NLFSILSSGTREIIRHKSEPVVD*GHICKA
Trigger: TGCCTTGCAAATGTGCCCCAAGTCGACAACTGGTTC...TGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TTTGCAAGTCGAGTTTCTACCATGAGGAGCCGTCCACCAATCTCCCTGGGCTTTTCAACTTCTGTGTTTTaGGTTCTGTTGATAATGGGC +
Preference number: 5 (lower is better)
Translates to: FASRVSTMRSRPPISLGFSTSVF*VLLIMG
Trigger: GCCCATTATCAACAGAACCAAAAACACAGAAGTTGA...AAAGCCCAGGGAGATTGGTGGACGGCTCCTCATGGTAGAAACTCGACTTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAGCTGCAAATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACAATCTGTTCTCAATTTaGTCATCTGGCACCCGAGAG +
Preference number: 5 (lower is better)
Translates to: QLQICSQFCHLAPERSSDNLFSI*SSGTRE
Trigger: CTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT...GTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATTTGCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TCTCAGAGAGGTACAGCCAAATTTGAACTCATCATACTTTCCCAAGTTCTCCACCATTCAGTCTCAGAGTaGGGTCCTGCAGGACTTCCA +
Preference number: 5 (lower is better)
Translates to: SQRGTAKFELIILSQVLHHSVSE*GPAGLP
Trigger: TGGAAGTCCTGCAGGACCCAACTCTGAGACTGAATG...GTGGAGAACTTGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTCTCTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CCCTTAAAAAGCATTGCCTCTTTTTCTGCAGCAGCCATGATTTCTTCAGCTCTTCATTCAGTCTCAGAGTaGGGTCCTGCAGGACTTCCA +
Preference number: 5 (lower is better)
Translates to: PLKSIASFSAAAMISSALHSVSE*GPAGLP
Trigger: TGGAAGTCCTGCAGGACCCAACTCTGAGACTGAATG...AAGAGCTGAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATGCTTTTTAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCTCCCGGATTTCTTGGTaGAGGATGACTGCAACATGC +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCSRISW*RMTATC
Trigger: GCATGTTGCAGTCATCCTCAACCAAGAAATCCGGGA...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCTACAAGTTGCTCCTGTaGACGTTCCAACTCCCGGAT +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCYKLLL*TFQLPD
Trigger: ATCCGGGAGTTGGAACGTCAACAGGAGCAACTTGTA...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ACCCGAGAGATCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGTTTATGTGGCTTGTCTaGGGTTTTATTCTGCCGGGG +
Preference number: 5 (lower is better)
Translates to: TREIIRHKSILKAAALCKFMWLV*GFILPG
Trigger: CCCCGGCAGAATAAAACCCAAGACAAGCCACATAAA...CTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGATCTCTCGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAGGGTTTCCACCAATTaGAGCTTCAATGTCCAGACG +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCRVSTN*SFNVQT
Trigger: CGTCTGGACATTGAAGCTCAAATTGGTGGAAACCCT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACAAGTTTCACTGTGCTTaGACTGTTCCGCTATGCACA +
Preference number: 5 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHKFHCA*TVPLCT
Trigger: TGTGCATAGCGGAACAGTCAAAGCACAGTGAAACTT...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACACTCAGCCAGATCATTaGCAAGTCGAGTTTCTACCA +
Preference number: 5 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHTQPDH*QVEFLP
Trigger: TGGTAGAAACTCGACTTGCAAATGATCTGGCTGAGT...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CCAATGAAGGCAGCTCCTCTACTGGTGATGAGGGTCTATCATCTCCATTTAATGACTCAGCCAGATCATTaGCAAGTCGAGTTTCTACCA +
Preference number: 5 (lower is better)
Translates to: PMKAAPLLVMRVYHLHLMTQPDH*QVEFLP
Trigger: TGGTAGAAACTCGACTTGCAAATGATCTGGCTGAGT...CATTAAATGGAGATGATAGACCCTCATCACCAGTAGAGGAGCTGCCTTCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGAACCAGTTGTCGACTaGGGGCACATTTGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEEPVVD*GHICKA
Trigger: TGCCTTGCAAATGTGCCCCAAGTCGACAACTGGTTC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTATCATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTGGCGGAGGCACTACAGGTTaGTCATCTGGGTTAACTGAA +
Preference number: 5 (lower is better)
Translates to: LSSSSSSFSGSLAEATGGGGTTG*SSGLTE
Trigger: TTCAGTTAACCCAGATGACAAACCTGTAGTGCCTCC...GCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCACTTTCACTTGCAGTTaGACTACATCCCGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCTFTCS*TTSRGW
Trigger: CCAACCACGGGATGTAGTCAAACTGCAAGTGAAAGT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCTTTTTCGGGATCACTaGCAGAGGCAACTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLFRDH*QRQLVA
Trigger: TGCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACTTTTTCGGGATCACTaGCAGAGGCAACTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNELFRDH*QRQLVA
Trigger: TGCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATTGGGGATATTGGTTGTaGCCAAGGGGGAATTACTGG +
Preference number: 5 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHWGYWL*PRGNYW
Trigger: CCAGTAATTCCCCCTTGGCAACAACCAATATCCCCA...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AGAAAGATAGCTTTCTGGCTGCTGTCCATAACCATCGTATGGCACATAGAGGTAATCTGGGGATATTGGTaGTTGCCAAGGGGGAATTAC +
Preference number: 5 (lower is better)
Translates to: RKIAFWLLSITIVWHIEVIWGYW*LPRGNY
Trigger: GTAATTCCCCCTTGGCAACAACCAATATCCCCAGAT...TACCTCTATGTGCCATACGATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAGAACAGAGCACAGATaGGGTCAAATTCAGGATCCG +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCRTEHR*GQIQDP
Trigger: CGGATCCTGAATTTGACCCAATCTGTGCTCTGTTCT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACCAATACGCAACATCATaGATTCCACACGGTACTGTG +
Preference number: 5 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHQYATS*IPHGTV
Trigger: CACAGTACCGTGTGGAATCAATGATGTTGCGTATTG...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATTGCAACATGCTGAGGTaGGCTCCGACATTTACTACA +
Preference number: 5 (lower is better)
Translates to: DISQYLKRQPFVRGNPRNCNMLR*APTFTT
Trigger: TGTAGTAAATGTCGGAGCCAACCTCAGCATGTTGCA...ATTCCTGGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TTATCATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTGGCGCAGTGGAAGATGGATaGCCTAAAGCCACATTAAGT +
Preference number: 5 (lower is better)
Translates to: LSSSSSSFSGSLAEATGGAVEDG*PKATLS
Trigger: ACTTAATGTGGCTTTAGGCAATCCATCTTCCACTGC...GCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCAATGTTCTTCAATATaGCTGTCCCATCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCQCSSI*LSHLWD
Trigger: GTCCCAGAGATGGGACAGCAATATTGAAGAACATTG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATCAATGTTCTTCAATATaGCTGTCCCATCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: DISQYLKRQPFVRGNPRNQCSSI*LSHLWD
Trigger: GTCCCAGAGATGGGACAGCAATATTGAAGAACATTG...ATTCCTGGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAATAGGGAAGAAAGGGCACTaGTGTGTTTACACTGAAAGG +
Preference number: 5 (lower is better)
Translates to: LFSILSSGTREIIRHKSIGKKGH*CVYTER
Trigger: CCTTTCAGTGTAAACACACAAGTGCCCTTTCTTCCC...TATTGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATAAATGGGATATTTGGTaGCAGGGGAGTCGGGAACTT +
Preference number: 5 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHKWDIW*QGSREL
Trigger: AAGTTCCCGACTCCCCTGCAACCAAATATCCCATTT...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATAAGTTTCACTGTGCTTaGACTGTTCCGCTATGCACA +
Preference number: 5 (lower is better)
Translates to: DISQYLKRQPFVRGNPRNKFHCA*TVPLCT
Trigger: TGTGCATAGCGGAACAGTCAAAGCACAGTGAAACTT...ATTCCTGGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGAGTTCGAGGTTTTCTaGGGGACGTTACCGATCGTG +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKEFEVF*GTLPIV
Trigger: CACGATCGGTAACGTCCCCAAGAAAACCTCGAACTC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATTTATTATTTCCAAAGGAGCGACATGGTGATGGCATCCTATTTCTTTCCGAGTTCGAGGTTTTCTaGGGGACGTTACCGATCGTG +
Preference number: 5 (lower is better)
Translates to: GYLLFPKERHGDGILFLSEFEVF*GTLPIV
Trigger: CACGATCGGTAACGTCCCCAAGAAAACCTCGAACTC...GGAAAGAAATAGGATGCCATCACCATGTCGCTCCTTTGGAAATAATAAATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TTATCATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTGGCTGGCGACGATTCTCATaGCTATCTATGGTTGACTTC +
Preference number: 5 (lower is better)
Translates to: LSSSSSSFSGSLAEATGGWRRFS*LSMVDF
Trigger: GAAGTCAACCATAGATAGCAATGAGAATCGTCGCCA...GCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCTATTTTTCCACTGGTaGTGGCGACGATTCTCATTG +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCLFFHW*WRRFSL
Trigger: CAATGAGAATCGTCGCCACAACCAGTGGAAAAATAG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCACTCAGCCAGATCATTaGCAAGTCGAGTTTCTACCA +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCTQPDH*QVEFLP
Trigger: TGGTAGAAACTCGACTTGCAAATGATCTGGCTGAGT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGAACCAGTTGTCGACTaGGGGCACATTTGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKEPVVD*GHICKA
Trigger: TGCCTTGCAAATGTGCCCCAAGTCGACAACTGGTTC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATTTATTATTTCCAAAGGAGCGACATGGTGATGGCATCCTATTTCTTTCCGAACCAGTTGTCGACTaGGGGCACATTTGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: GYLLFPKERHGDGILFLSEPVVD*GHICKA
Trigger: TGCCTTGCAAATGTGCCCCAAGTCGACAACTGGTTC...GGAAAGAAATAGGATGCCATCACCATGTCGCTCCTTTGGAAATAATAAATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACCACACTTGAACCAGTaGTCGACTTGGGGCACATTT +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEPHLNQ*STWGTF
Trigger: AAATGTGCCCCAAGTCGACAACTGGTTCAAGTGTGG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGGCTTGAAGCCACACTaGAACCAGTTGTCGACTTGG +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKGLKPH*NQLSTW
Trigger: CCAAGTCGACAACTGGTTCAAGTGTGGCTTCAAGCC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGTATTCTTCTTTGGCTaGAAGCCACACTTGAACCAG +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCVFFFG*KPHLNQ
Trigger: CTGGTTCAAGTGTGGCTTCAAGCCAAAGAAGAATAC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCACAACTCCAGTTGGCTaGGTTTTAGGCAGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCTTPVG*VLGSFL
Trigger: CAAGAAACTGCCTAAAACCAAGCCAACTGGAGTTGT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GACATAAGTGGTTTCAGAATGTTAGCAGTTCGAGGGGTGAAGCTGCCATTTTTAGCATCTGACTTTCACTaGCAGTTTGACTACATCCCG +
Preference number: 5 (lower is better)
Translates to: DISGFRMLAVRGVKLPFLASDFH*QFDYIP
Trigger: CGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGC...TAAAAATGGCAGCTTCACCCCTCGAACTGCTAACATTCTGAAACCACTTATGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTGGAATCTGGGGATATaGGTTGTTGCCAAGGGGGAA +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQWNLGI*VVAKGE
Trigger: TTCCCCCTTGGCAACAACCAATATCCCCAGATTCCA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AAAGTGATTGGAAATCCAAAACGAGAACAGAGTTGCTATAGAAGCGGGATTCAGTGGAATCTGGGGATATaGGTTGTTGCCAAGGGGGAA +
Preference number: 5 (lower is better)
Translates to: KVIGNPKREQSCYRSGIQWNLGI*VVAKGE
Trigger: TTCCCCCTTGGCAACAACCAATATCCCCAGATTCCA...CTGAATCCCGCTTCTATAGCAACTCTGTTCTCGTTTTGGATTTCCAATCACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAGCTGCAAATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACTCAACTTCTGTGTTTTaGGTTCTGTTGATAATGGGC +
Preference number: 5 (lower is better)
Translates to: QLQICSQFCHLAPERSSDSTSVF*VLLIMG
Trigger: GCCCATTATCAACAGAACCAAAAACACAGAAGTTGA...GTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATTTGCAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAAGAACAGAGCACAGATaGGGTCAAATTCAGGATCCG +
Preference number: 5 (lower is better)
Translates to: NLFSILSSGTREIIRHKSRTEHR*GQIQDP
Trigger: CGGATCCTGAATTTGACCCAATCTGTGCTCTGTTCT...TGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCAATACGCAACATCATaGATTCCACACGGTACTGTG +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCQYATS*IPHGTV
Trigger: CACAGTACCGTGTGGAATCAATGATGTTGCGTATTG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTACAGAAGCTTCATACATaGTCGCTGAACATACTGTTT +
Preference number: 5 (lower is better)
Translates to: RQPFVRGNPRNASESHILQKLHT*SLNILF
Trigger: AAACAGTATGTTCAGCGACAATGTATGAAGCTTCTG...TAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGGCTGCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAACATTCAGTCTCAGAGTaGGGTCCTGCAGGACTTCCA +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKHSVSE*GPAGLP
Trigger: TGGAAGTCCTGCAGGACCCAACTCTGAGACTGAATG...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCATTCAGTCTCAGAGTaGGGTCCTGCAGGACTTCCA +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFHSVSE*GPAGLP
Trigger: TGGAAGTCCTGCAGGACCCAACTCTGAGACTGAATG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATCCCGGATTTCTTGGTaGAGGATGACTGCAACATGC +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNESRISW*RMTATC
Trigger: GCATGTTGCAGTCATCCTCAACCAAGAAATCCGGGA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TCTGATCAGCTGGGACAAACTGACTTCCAGAATAAAAGCTACAAAATCCAGTCTCAACTCCCGGATTTCTaGGTTGAGGATGACTGCAAC +
Preference number: 5 (lower is better)
Translates to: SDQLGQTDFQNKSYKIQSQLPDF*VEDDCN
Trigger: GTTGCAGTCATCCTCAACCAAGAAATCCGGGAGTTG...AGACTGGATTTTGTAGCTTTTATTCTGGAAGTCAGTTTGTCCCAGCTGATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACAACTCCCGGATTTCTaGGTTGAGGATGACTGCAAC +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEQLPDF*VEDDCN
Trigger: GTTGCAGTCATCCTCAACCAAGAAATCCGGGAGTTG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTAGCAGAACTTGCTTTTCGGAACTaGACAGCAGCCAGATTTATT +
Preference number: 5 (lower is better)
Translates to: PFVRGNPRNASESHILAELAFRN*TAARFI
Trigger: AATAAATCTGGCTGCTGTCAAGTTCCGAAAAGCAAG...TTCTGCTAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp ACCCGAGAGATCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGTCTTGCAGGATCCAGTaGCATGCAATGTATTACTTT +
Preference number: 5 (lower is better)
Translates to: TREIIRHKSILKAAALCKSCRIQ*HAMYYF
Trigger: AAAGTAATACATTGCATGCAACTGGATCCTGCAAGA...CTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGATCTCTCGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTTGACTTCTAGGGTTTCCACCAATTaGAGCTTCAATGTCCAGACG +
Preference number: 5 (lower is better)
Translates to: YFSTGCGDDSHCYLWLTSRVSTN*SFNVQT
Trigger: CGTCTGGACATTGAAGCTCAAATTGGTGGAAACCCT...AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCTCTGTTTCTTCGCCGTaGCTTTTCATCTTCCCATAT +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCSVSSP*LFIFPY
Trigger: ATATGGGAAGATGAAAAGCAACGGCGAAGAAACAGA...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGGGAAGAAAGGGCACTaGTGTGTTTACACTGAAAGG +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEGKKGH*CVYTER
Trigger: CCTTTCAGTGTAAACACACAAGTGCCCTTTCTTCCC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTAAACCGGGATGGTTTATaGCCAGGTTGTAATTTATAT +
Preference number: 5 (lower is better)
Translates to: RQPFVRGNPRNASESHILNRDGL*PGCNLY
Trigger: ATATAAATTACAACCTGGCAATAAACCATCCCGGTT...TAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGGCTGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGGGAGTCGGGAACTTTaGGCCAAAAGTCCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFGSREL*AKSPSK
Trigger: CTTTGAAGGACTTTTGGCCAAAAGTTCCCGACTCCC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGGGAGTCGGGAACTTTaGGCCAAAAGTCCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKGSREL*AKSPSK
Trigger: CTTTGAAGGACTTTTGGCCAAAAGTTCCCGACTCCC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAAAGCCCCTTTGCTTTaGCTCCCATGCTATTTGTTT +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCKAPLL*LPCYLF
Trigger: AAACAAATAGCATGGGAGCAAAAGCAAAGGGGCTTT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CTATTTACTCGGGAGAGTTTGAAAAGTACTGGGCAGTTCAGAGAAACACATGGGGTCCGTTTATTTGCTTaGTTATGCTCAAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: LFTRESLKSTGQFRETHGVRLFA*LCSREP
Trigger: TGGTTCCCTTGAGCATAACAAAGCAAATAAACGGAC...CCCATGTGTTTCTCTGAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGAACCAGTTGTCGACTaGGGGCACATTTGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTEPVVD*GHICKA
Trigger: TGCCTTGCAAATGTGCCCCAAGTCGACAACTGGTTC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAACCACACTTGAACCAGTaGTCGACTTGGGGCACATTT +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKPHLNQ*STWGTF
Trigger: AAATGTGCCCCAAGTCGACAACTGGTTCAAGTGTGG...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAATAGTATTCTTCTTTGGCTaGAAGCCACACTTGAACCAG +
Preference number: 5 (lower is better)
Translates to: LFSILSSGTREIIRHKSIVFFFG*KPHLNQ
Trigger: CTGGTTCAAGTGTGGCTTCAAGCCAAAGAAGAATAC...TATTGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATGTATTCTTCTTTGGCTaGAAGCCACACTTGAACCAG +
Preference number: 5 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHVFFFG*KPHLNQ
Trigger: CTGGTTCAAGTGTGGCTTCAAGCCAAAGAAGAATAC...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAATAACAACTCCAGTTGGCTaGGTTTTAGGCAGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: LFSILSSGTREIIRHKSITTPVG*VLGSFL
Trigger: CAAGAAACTGCCTAAAACCAAGCCAACTGGAGTTGT...TATTGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTTATCAACATCCTCCTaGGTATGTGCTGTAGTGGGG +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLSTSS*VCAVVG
Trigger: CCCCACTACAGCACATACCAAGGAGGATGTTGATAA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGACTACATCCCGTGGTaGGTGCTTGTAAAGCAATCT +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEDYIPW*VLVKQS
Trigger: AGATTGCTTTACAAGCACCAACCACGGGATGTAGTC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGCATCTGACTTTCACTaGCAGTTTGACTACATCCCG +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEASDFH*QFDYIP
Trigger: CGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTGGGGATATTGGTTGTaGCCAAGGGGGAATTACTGG +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFWGYWL*PRGNYW
Trigger: CCAGTAATTCCCCCTTGGCAACAACCAATATCCCCA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATGGGGATATTGGTTGTaGCCAAGGGGGAATTACTGG +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKWGYWL*PRGNYW
Trigger: CCAGTAATTCCCCCTTGGCAACAACCAATATCCCCA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATGCATCTGAATCTCATATCCTACTGATATCTGATATCTaGACTGAAAACTGTCTTGTC +
Preference number: 5 (lower is better)
Translates to: RQPFVRGNPRNASESHILLISDI*TENCLV
Trigger: GACAAGACAGTTTTCAGTCAAGATATCAGATATCAG...TAGGATATGAGATTCAGATGCATTCCTGGGGTTACCTCTTACAAAGGGCTGCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATCAATACGCAACATCATaGATTCCACACGGTACTGTG +
Preference number: 5 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHQYATS*IPHGTV
Trigger: CACAGTACCGTGTGGAATCAATGATGTTGCGTATTG...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATGAGGTACAGCCAAATTaGAACTCATCATACTTTCCC +
Preference number: 5 (lower is better)
Translates to: DISQYLKRQPFVRGNPRNEVQPN*NSSYFP
Trigger: GGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTC...ATTCCTGGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGTATGTGCTGTAGTGGGGAGTATACATGGACTTACATCCATTTTTGGAGGCACCCACATACCTCTTTTTaGTTTGTAAAACACAGGGCA +
Preference number: 5 (lower is better)
Translates to: GMCCSGEYTWTYIHFWRHPHTSF*FVKHRA
Trigger: TGCCCTGTGTTTTACAAACAAAAAAGAGGTATGTGG...GTGCCTCCAAAAATGGATGTAAGTCCATGTATACTCCCCACTACAGCACATACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAATAGGCAAAGATAAAGTCTaGTATGCTGGCCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LFSILSSGTREIIRHKSIGKDKV*YAGLSF
Trigger: GAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCC...TATTGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CCAATGAAGGCAGCTCCTCTACTGGTGATGAGGGTCTATCATCTCCATTTAATGCAAGGGTGGAAGGATTaGCTTGGTAATATAGTAAGT +
Preference number: 5 (lower is better)
Translates to: PMKAAPLLVMRVYHLHLMQGWKD*LGNIVS
Trigger: ACTTACTATATTACCAAGCAAATCCTTCCACCCTTG...CATTAAATGGAGATGATAGACCCTCATCACCAGTAGAGGAGCTGCCTTCATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAACAACTCCCGGATTTCTaGGTTGAGGATGACTGCAAC +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKQLPDF*VEDDCN
Trigger: GTTGCAGTCATCCTCAACCAAGAAATCCGGGAGTTG...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGTTTCTTGAAACATACAGTTCTAAATCTTCACAGGCCACGTCTACAAGTTCACCAACTCCCGGATTTCTaGGTTGAGGATGACTGCAAC +
Preference number: 5 (lower is better)
Translates to: CFLKHTVLNLHRPRLQVHQLPDF*VEDDCN
Trigger: GTTGCAGTCATCCTCAACCAAGAAATCCGGGAGTTG...GTGAACTTGTAGACGTGGCCTGTGAAGATTTAGAACTGTATGTTTCAAGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTACAAGTTGCTCCTGTaGACGTTCCAACTCCCGGAT +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFYKLLL*TFQLPD
Trigger: ATCCGGGAGTTGGAACGTCAACAGGAGCAACTTGTA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGCATATCTTTACAAGTaGCTCCTGTTGACGTTCCAA +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCAYLYK*LLLTFQ
Trigger: TTGGAACGTCAACAGGAGCAACTTGTAAAGATATGC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AATCTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCATTTACTCGGGAGAGTTaGAAAAGTACTGGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: NLFSILSSGTREIIRHKSFTRES*KSTGQF
Trigger: GAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAA...TGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TTATCATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTGGCCGGAGATATGGTGCCTaGGACAATTCTCTATTTACT +
Preference number: 5 (lower is better)
Translates to: LSSSSSSFSGSLAEATGGRRYGA*DNSLFT
Trigger: AGTAAATAGAGAATTGTCCAAGGCACCATATCTCCG...GCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTTTATGTGGCTTGTCTaGGGTTTTATTCTGCCGGGG +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQFMWLV*GFILPG
Trigger: CCCCGGCAGAATAAAACCCAAGACAAGCCACATAAA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS CCA 90 bp TCTTACCTTTGCTTGACTCTTTGTCTTTGTGAACTTCTACCATATTaGCTGGTGTACACTGAAGCATTTCAGGAGACAGAACCTCAGAGT +
Preference number: 5 (lower is better)
Translates to: SYLCLTLCLCELLPY*LVYTEAFQETEPQS
Trigger: ACTCTGAGGTTCTGTCTCCTGAAATGCTTCAGTGTACACCAGCCAATATGGTAGAAGTTCACAAAGACAAAGAGTCAAGCAAAGGTAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470871.1
CDS-3UTR CAA 90 bp GACTCGAAAGGTAAAGAGGGGAAAACGCTGATGAAGAACATGAAAGCTCACATTCATTATGGCTCCGCTTaGCAAAAGTTCACATATCCT +
Preference number: 5 (lower is better)
Translates to: DSKGKEGKTLMKNMKAHIHYGSA*QKFTYP
Trigger: AGGATATGTGAACTTTTGCAAAGCGGAGCCATAATG...AATGTGAGCTTTCATGTTCTTCATCAGCGTTTTCCCCTCTTTACCTTTCGAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCCCAATATTAAAGAGCTaGGTATTTCATCTTGTTCCC +
Preference number: 5 (lower is better)
Translates to: SSDISQYLKRQPFVRGNPPILKS*VFHLVP
Trigger: GGGAACAAGATGAAATACCAAGCTCTTTAATATTGG...GGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAAGGGTTTCCACCAATTaGAGCTTCAATGTCCAGACG +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKRVSTN*SFNVQT
Trigger: CGTCTGGACATTGAAGCTCAAATTGGTGGAAACCCT...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TCTGATCAGCTGGGACAAACTGACTTCCAGAATAAAAGCTACAAAATCCAGTCTCAATGTTCTTCAATATaGCTGTCCCATCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: SDQLGQTDFQNKSYKIQSQCSSI*LSHLWD
Trigger: GTCCCAGAGATGGGACAGCAATATTGAAGAACATTG...AGACTGGATTTTGTAGCTTTTATTCTGGAAGTCAGTTTGTCCCAGCTGATCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACTGAAAGCTTGCTTGTaGCAATTACAGAAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNELKACL*QLQKSG
Trigger: CCCACTCTTCTGTAATTGCAACAAGCAAGCTTTCAG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCTGAAAGCTTGCTTGTaGCAATTACAGAAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLKACL*QLQKSG
Trigger: CCCACTCTTCTGTAATTGCAACAAGCAAGCTTTCAG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTGGCTGTGGGAGGCTAAGAAACACTTCTTTGCTTACTGAACTCCTATTCAATCTGAAAGCTTGCTTGTaGCAATTACAGAAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: FGCGRLRNTSLLTELLFNLKACL*QLQKSG
Trigger: CCCACTCTTCTGTAATTGCAACAAGCAAGCTTTCAG...ATTGAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAGCCTCCCACAGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGGGAAGAAAGGGCACTaGTGTGTTTACACTGAAAGG +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKGKKGH*CVYTER
Trigger: CCTTTCAGTGTAAACACACAAGTGCCCTTTCTTCCC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCTGTGAGTTACAAAACTaGACTCACTGTCTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCCELQN*THCLQS
Trigger: AGACTGAAGACAGTGAGTCAAGTTTTGTAACTCACA...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGGGAGTCGGGAACTTTaGGCCAAAAGTCCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTGSREL*AKSPSK
Trigger: CTTTGAAGGACTTTTGGCCAAAAGTTCCCGACTCCC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAAAATGGGATATTTGGTaGCAGGGGAGTCGGGAACTT +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKKWDIW*QGSREL
Trigger: AAGTTCCCGACTCCCCTGCAACCAAATATCCCATTT...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CTGTTCTCAATTTTGTCATCTGGCACCCGAGAGATCATCCGACATAAGTCAATAAGCCTCCAGAACTACTaGCAAATTCAGACACATTCT +
Preference number: 5 (lower is better)
Translates to: LFSILSSGTREIIRHKSISLQNY*QIQTHS
Trigger: AGAATGTGTCTGAATTTGCAAGTAGTTCTGGAGGCT...TATTGACTTATGTCGGATGATCTCTCGGGTGCCAGATGACAAAATTGAGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TTATCATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTGGCTTGCTCCCATGCTATTaGTTTGATTGGACTTCTCAA +
Preference number: 5 (lower is better)
Translates to: LSSSSSSFSGSLAEATGGLLPCY*FDWTSQ
Trigger: TTGAGAAGTCCAATCAAACAAATAGCATGGGAGCAA...GCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATGGCGACGATTCTCATaGCTATCTATGGTTGACTTC +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEWRRFS*LSMVDF
Trigger: GAAGTCAACCATAGATAGCAATGAGAATCGTCGCCA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCTATTTTTCCACTGGTaGTGGCGACGATTCTCATTG +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLFFHW*WRRFSL
Trigger: CAATGAGAATCGTCGCCACAACCAGTGGAAAAATAG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCCTAAGAAACACTTCTTaGCTTACTGAACTCCTATTC +
Preference number: 5 (lower is better)
Translates to: SSDISQYLKRQPFVRGNPLRNTS*LTELLF
Trigger: GAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAG...GGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGCAGTAAAAGAGGTATaGGCTGAGTCAAGAGACTGT +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQAVKEV*AESRDC
Trigger: ACAGTCTCTTGACTCAGCCAATACCTCTTTTACTGC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTACTTGACCCTTTATaGACAACTCCTTGGCCACTG +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNELLDPL*TTPWPL
Trigger: CAGTGGCCAAGGAGTTGTCAATAAAGGGTCAAGTAA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TCATTGATTCCACACGGTACTGTGAACCCCTTGTCAGTACATGTAAAAACTGAACGACTTGGGGCACATTaGCAAGGCATAATCACAATT +
Preference number: 5 (lower is better)
Translates to: SLIPHGTVNPLSVHVKTERLGAH*QGIITI
Trigger: AATTGTGATTATGCCTTGCAAATGTGCCCCAAGTCG...TTCAGTTTTTACATGTACTGACAAGGGGTTCACAGTACCGTGTGGAATCAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCGACTTGGGGCACATTaGCAAGGCATAATCACAATT +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQRLGAH*QGIITI
Trigger: AATTGTGATTATGCCTTGCAAATGTGCCCCAAGTCG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACCACACTTGAACCAGTaGTCGACTTGGGGCACATTT +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTPHLNQ*STWGTF
Trigger: AAATGTGCCCCAAGTCGACAACTGGTTCAAGTGTGG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGGCTTGAAGCCACACTaGAACCAGTTGTCGACTTGG +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHGLKPH*NQLSTW
Trigger: CCAAGTCGACAACTGGTTCAAGTGTGGCTTCAAGCC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGGCTTGAAGCCACACTaGAACCAGTTGTCGACTTGG +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSGLKPH*NQLSTW
Trigger: CCAAGTCGACAACTGGTTCAAGTGTGGCTTCAAGCC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGACAACTCCAGTTGGCTaGGTTTTAGGCAGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQTTPVG*VLGSFL
Trigger: CAAGAAACTGCCTAAAACCAAGCCAACTGGAGTTGT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGGAGGCACTACAGGTTaGTCATCTGGGTTAACTGAA +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKGGTTG*SSGLTE
Trigger: TTCAGTTAACCCAGATGACAAACCTGTAGTGCCTCC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGGAGGCACTACAGGTTaGTCATCTGGGTTAACTGAA +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFGGTTG*SSGLTE
Trigger: TTCAGTTAACCCAGATGACAAACCTGTAGTGCCTCC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGTTTCTTGAAACATACAGTTCTAAATCTTCACAGGCCACGTCTACAAGTTCACGACTACATCCCGTGGTaGGTGCTTGTAAAGCAATCT +
Preference number: 5 (lower is better)
Translates to: CFLKHTVLNLHRPRLQVHDYIPW*VLVKQS
Trigger: AGATTGCTTTACAAGCACCAACCACGGGATGTAGTC...GTGAACTTGTAGACGTGGCCTGTGAAGATTTAGAACTGTATGTTTCAAGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAACTTTCACTTGCAGTTaGACTACATCCCGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKTFTCS*TTSRGW
Trigger: CCAACCACGGGATGTAGTCAAACTGCAAGTGAAAGT...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACTTTCACTTGCAGTTaGACTACATCCCGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFTFTCS*TTSRGW
Trigger: CCAACCACGGGATGTAGTCAAACTGCAAGTGAAAGT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGCATCTGACTTTCACTaGCAGTTTGACTACATCCCG +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKASDFH*QFDYIP
Trigger: CGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCTTTTTCGGGATCACTaGCAGAGGCAACTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHLFRDH*QRQLVA
Trigger: TGCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCTTTTTCGGGATCACTaGCAGAGGCAACTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWLFRDH*QRQLVA
Trigger: TGCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACATGGGGATATTGGTTGTaGCCAAGGGGGAATTACTGG +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTWGYWL*PRGNYW
Trigger: CCAGTAATTCCCCCTTGGCAACAACCAATATCCCCA...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTATCTGGGGATATTGGTaGTTGCCAAGGGGGAATTAC +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFIWGYW*LPRGNY
Trigger: GTAATTCCCCCTTGGCAACAACCAATATCCCCAGAT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACATGGAATCTGGGGATATaGGTTGTTGCCAAGGGGGAA +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTWNLGI*VVAKGE
Trigger: TTCCCCCTTGGCAACAACCAATATCCCCAGATTCCA...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AGAAAGATAGCTTTCTGGCTGCTGTCCATAACCATCGTATGGCACATAGAGGTATCTCCATTTAATGCTTaGGAATCTGGGGATATTGGT +
Preference number: 5 (lower is better)
Translates to: RKIAFWLLSITIVWHIEVSPFNA*ESGDIG
Trigger: ACCAATATCCCCAGATTCCAAAGCATTAAATGGAGA...TACCTCTATGTGCCATACGATGGTTATGGACAGCAGCCAGAAAGCTATCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp ACCCGAGAGATCATCCGACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGTCTCATGTAAAGCTTTaGCCTCCTGTAAGTTTTGTA +
Preference number: 5 (lower is better)
Translates to: TREIIRHKSILKAAALCKSHVKL*PPVSFV
Trigger: TACAAAACTTACAGGAGGCAAAAGCTTTACATGAGA...CTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTCGGATGATCTCTCGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAACAAAAGCTACTCCATaGGGGGACACTGTGATATCA +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNETKATP*GDTVIS
Trigger: TGATATCACAGTGTCCCCCAATGGAGTAGCTTTTGT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCTTTCTTACTGAAGGCTaGACAAAAGCTACTCCATTG +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCFLTEG*TKATPL
Trigger: CAATGGAGTAGCTTTTGTCAAGCCTTCAGTAAGAAA...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AAAGTGATTGGAAATCCAAAACGAGAACAGAGTTGCTATAGAAGCGGGATTCAGTTCACTGGTTTAGGATaGGTAGCAGTTACAGCTTCG +
Preference number: 5 (lower is better)
Translates to: KVIGNPKREQSCYRSGIQFTGLG*VAVTAS
Trigger: CGAAGCTGTAACTGCTACCAATCCTAAACCAGTGAA...CTGAATCCCGCTTCTATAGCAACTCTGTTCTCGTTTTGGATTTCCAATCACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCCACATACCTCTTTTTaGTTTGTAAAACACAGGGCA +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCPHTSF*FVKHRA
Trigger: TGCCCTGTGTTTTACAAACAAAAAAGAGGTATGTGG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCAGAAGCTTCATACATaGTCGCTGAACATACTGTTT +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCQKLHT*SLNILF
Trigger: AAACAGTATGTTCAGCGACAATGTATGAAGCTTCTG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGGCAAAGATAAAGTCTaGTATGCTGGCCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEGKDKV*YAGLSF
Trigger: GAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCATTCAGTCTCAGAGTaGGGTCCTGCAGGACTTCCA +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHHSVSE*GPAGLP
Trigger: TGGAAGTCCTGCAGGACCCAACTCTGAGACTGAATG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACATACAAGTTGCTCCTGTaGACGTTCCAACTCCCGGAT +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTYKLLL*TFQLPD
Trigger: ATCCGGGAGTTGGAACGTCAACAGGAGCAACTTGTA...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGTAACAAAAATGTCTTaGCACAGTTCCTCACAATGC +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCVTKMS*HSSSQC
Trigger: GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTAC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATATTTATGTGGCTTGTCTaGGGTTTTATTCTGCCGGGG +
Preference number: 5 (lower is better)
Translates to: LCSCATSFSYTRINSLLIFMWLV*GFILPG
Trigger: CCCCGGCAGAATAAAACCCAAGACAAGCCACATAAA...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCATTATGGCTCCGCTTaGCAAAAGTTCACATATCCT +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQHYGSA*QKFTYP
Trigger: AGGATATGTGAACTTTTGCAAAGCGGAGCCATAATG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTGGCTGTGGGAGGCTAAGAAACACTTCTTTGCTTACTGAACTCCTATTCAATCATTATGGCTCCGCTTaGCAAAAGTTCACATATCCT +
Preference number: 5 (lower is better)
Translates to: FGCGRLRNTSLLTELLFNHYGSA*QKFTYP
Trigger: AGGATATGTGAACTTTTGCAAAGCGGAGCCATAATG...ATTGAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAGCCTCCCACAGCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCTTGCTTTTCGGAACTaGACAGCAGCCAGATTTATT +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLAFRN*TAARFI
Trigger: AATAAATCTGGCTGCTGTCAAGTTCCGAAAAGCAAG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACTTGCTTTTCGGAACTaGACAGCAGCCAGATTTATT +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNELAFRN*TAARFI
Trigger: AATAAATCTGGCTGCTGTCAAGTTCCGAAAAGCAAG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GACATAAGTGGTTTCAGAATGTTAGCAGTTCGAGGGGTGAAGCTGCCATTTTTATCTTGCAGGATCCAGTaGCATGCAATGTATTACTTT +
Preference number: 5 (lower is better)
Translates to: DISGFRMLAVRGVKLPFLSCRIQ*HAMYYF
Trigger: AAAGTAATACATTGCATGCAACTGGATCCTGCAAGA...TAAAAATGGCAGCTTCACCCCTCGAACTGCTAACATTCTGAAACCACTTATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCCAATATTAAAGAGCTaGGTATTTCATCTTGTTCCC +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCPILKS*VFHLVP
Trigger: GGGAACAAGATGAAATACCAAGCTCTTTAATATTGG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTCTGTTTCTTCGCCGTaGCTTTTCATCTTCCCATAT +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQSVSSP*LFIFPY
Trigger: ATATGGGAAGATGAAAAGCAACGGCGAAGAAACAGA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTATCATCATCATCTTCATCTTTTTCGGGATCACTTGCAGAGGCAACTGGTGGCGGTTTAACTGAAAGCTaGCTTGTTGCAATTACAGAA +
Preference number: 5 (lower is better)
Translates to: LSSSSSSFSGSLAEATGGGLTES*LVAITE
Trigger: TTCTGTAATTGCAACAAGCAAGCTTTCAGTTAAACC...GCCACCAGTTGCCTCTGCAAGTGATCCCGAAAAAGATGAAGATGATGATGATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCGGTTTAACTGAAAGCTaGCTTGTTGCAATTACAGAA +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCGLTES*LVAITE
Trigger: TTCTGTAATTGCAACAAGCAAGCTTTCAGTTAAACC...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GACTCGAAAGGTAAAGAGGGGAAAACGCTGATGAAGAACATGAAAGCTCACATTTGTGAGTTACAAAACTaGACTCACTGTCTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: DSKGKEGKTLMKNMKAHICELQN*THCLQS
Trigger: AGACTGAAGACAGTGAGTCAAGTTTTGTAACTCACA...AATGTGAGCTTTCATGTTCTTCATCAGCGTTTTCCCCTCTTTACCTTTCGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TCTCAGAGAGGTACAGCCAAATTTGAACTCATCATACTTTCCCAAGTTCTCCACCTTCGTTTTCGGGATTaGAGAGTTCCATCTAAACTT +
Preference number: 5 (lower is better)
Translates to: SQRGTAKFELIILSQVLHLRFRD*RVPSKL
Trigger: AAGTTTAGATGGAACTCTCAAATCCCGAAAACGAAG...GTGGAGAACTTGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTCTCTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGGGAGTCGGGAACTTTaGGCCAAAAGTCCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSGSREL*AKSPSK
Trigger: CTTTGAAGGACTTTTGGCCAAAAGTTCCCGACTCCC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAAAATGGGATATTTGGTaGCAGGGGAGTCGGGAACTT +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTKWDIW*QGSREL
Trigger: AAGTTCCCGACTCCCCTGCAACCAAATATCCCATTT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGAGCCTCCAGAACTACTaGCAAATTCAGACACATTCT +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQSLQNY*QIQTHS
Trigger: AGAATGTGTCTGAATTTGCAAGTAGTTCTGGAGGCT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTTGACTTCTAGCCTCCAGAACTACTaGCAAATTCAGACACATTCT +
Preference number: 5 (lower is better)
Translates to: YFSTGCGDDSHCYLWLTSSLQNY*QIQTHS
Trigger: AGAATGTGTCTGAATTTGCAAGTAGTTCTGGAGGCT...AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCAGTAAACATAGCACTTaGATTATGAGGCCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCSKHST*IMRPLN
Trigger: GTTCAAAGGCCTCATAATCAAAGTGCTATGTTTACT...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGTTTCTTGAAACATACAGTTCTAAATCTTCACAGGCCACGTCTACAAGTTCACATGCTTGGTCCAGCTTaGATTCTAGGGAATTGCGAT +
Preference number: 5 (lower is better)
Translates to: CFLKHTVLNLHRPRLQVHMLGPA*ILGNCD
Trigger: ATCGCAATTCCCTAGAATCAAAGCTGGACCAAGCAT...GTGAACTTGTAGACGTGGCCTGTGAAGATTTAGAACTGTATGTTTCAAGAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAATGCTTGGTCCAGCTTaGATTCTAGGGAATTGCGAT +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKMLGPA*ILGNCD
Trigger: ATCGCAATTCCCTAGAATCAAAGCTGGACCAAGCAT...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CCCTTAAAAAGCATTGCCTCTTTTTCTGCAGCAGCCATGATTTCTTCAGCTCTTTCCCATGCTATTTGTTaGATTGGACTTCTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: PLKSIASFSAAAMISSALSHAIC*IGLLKE
Trigger: TTCCTTGAGAAGTCCAATCAAACAAATAGCATGGGA...AAGAGCTGAAGAAATCATGGCTGCTGCAGAAAAAGAGGCAATGCTTTTTAAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GACATAAGTGGTTTCAGAATGTTAGCAGTTCGAGGGGTGAAGCTGCCATTTTTATCCCATGCTATTTGTTaGATTGGACTTCTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: DISGFRMLAVRGVKLPFLSHAIC*IGLLKE
Trigger: TTCCTTGAGAAGTCCAATCAAACAAATAGCATGGGA...TAAAAATGGCAGCTTCACCCCTCGAACTGCTAACATTCTGAAACCACTTATGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGAAAGCCCCTTTGCTTTaGCTCCCATGCTATTTGTTT +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQKAPLL*LPCYLF
Trigger: AAACAAATAGCATGGGAGCAAAAGCAAAGGGGCTTT...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACTTTGGTTTGTGAAATaGCTTCTGATAACGACCTCG +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNELWFVK*LLITTS
Trigger: CGAGGTCGTTATCAGAAGCAATTTCACAAACCAAAG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TCTGATCAGCTGGGACAAACTGACTTCCAGAATAAAAGCTACAAAATCCAGTCTCTTTGGTTTGTGAAATaGCTTCTGATAACGACCTCG +
Preference number: 5 (lower is better)
Translates to: SDQLGQTDFQNKSYKIQSLWFVK*LLITTS
Trigger: CGAGGTCGTTATCAGAAGCAATTTCACAAACCAAAG...AGACTGGATTTTGTAGCTTTTATTCTGGAAGTCAGTTTGTCCCAGCTGATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCAAATGCTGAAGGTGTaGACACATTTCGATTTTTAC +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCQMLKV*THFDFY
Trigger: GTAAAAATCGAAATGTGTCAACACCTTCAGCATTTG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGTCCGTTTATTTGCTTaGTTATGCTCAAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEVRLFA*LCSREP
Trigger: TGGTTCCCTTGAGCATAACAAAGCAAATAAACGGAC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGTCCGTTTATTTGCTTaGTTATGCTCAAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQVRLFA*LCSREP
Trigger: TGGTTCCCTTGAGCATAACAAAGCAAATAAACGGAC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTGGCGACGATTCTCATaGCTATCTATGGTTGACTTC +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFWRRFS*LSMVDF
Trigger: GAAGTCAACCATAGATAGCAATGAGAATCGTCGCCA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATGGCGACGATTCTCATaGCTATCTATGGTTGACTTC +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKWRRFS*LSMVDF
Trigger: GAAGTCAACCATAGATAGCAATGAGAATCGTCGCCA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCTATTTTTCCACTGGTaGTGGCGACGATTCTCATTG +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFLFFHW*WRRFSL
Trigger: CAATGAGAATCGTCGCCACAACCAGTGGAAAAATAG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGGCAGTAAAAGAGGTATaGGCTGAGTCAAGAGACTGT +
Preference number: 5 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQAVKEV*AESRDC
Trigger: ACAGTCTCTTGACTCAGCCAATACCTCTTTTACTGC...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACTCAGCCAGATCATTaGCAAGTCGAGTTTCTACCA +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFTQPDH*QVEFLP
Trigger: TGGTAGAAACTCGACTTGCAAATGATCTGGCTGAGT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAACTCAGCCAGATCATTaGCAAGTCGAGTTTCTACCA +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKTQPDH*QVEFLP
Trigger: TGGTAGAAACTCGACTTGCAAATGATCTGGCTGAGT...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATTACTTGACCCTTTATaGACAACTCCTTGGCCACTG +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKLLDPL*TTPWPL
Trigger: CAGTGGCCAAGGAGTTGTCAATAAAGGGTCAAGTAA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCGACTTGGGGCACATTaGCAAGGCATAATCACAATT +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFRLGAH*QGIITI
Trigger: AATTGTGATTATGCCTTGCAAATGTGCCCCAAGTCG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTCCACACTTGAACCAGTaGTCGACTTGGGGCACATTT +
Preference number: 5 (lower is better)
Translates to: LSHSLYMIHTHLFQLQICPHLNQ*STWGTF
Trigger: AAATGTGCCCCAAGTCGACAACTGGTTCAAGTGTGG...ACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGTATTCTTCTTTGGCTaGAAGCCACACTTGAACCAG +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFVFFFG*KPHLNQ
Trigger: CTGGTTCAAGTGTGGCTTCAAGCCAAAGAAGAATAC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAACTCCAGTTGGCTaGGTTTTAGGCAGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFTTPVG*VLGSFL
Trigger: CAAGAAACTGCCTAAAACCAAGCCAACTGGAGTTGT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGACTTACATCCATTTTaGGAGGCACTACAGGTTTGT +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEDLHPF*EALQVC
Trigger: ACAAACCTGTAGTGCCTCCAAAAATGGATGTAAGTC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGACTACATCCCGTGGTaGGTGCTTGTAAAGCAATCT +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTDYIPW*VLVKQS
Trigger: AGATTGCTTTACAAGCACCAACCACGGGATGTAGTC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTACTTTCACTTGCAGTTaGACTACATCCCGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSTFTCS*TTSRGW
Trigger: CCAACCACGGGATGTAGTCAAACTGCAAGTGAAAGT...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTGGGGATATTGGTTGTaGCCAAGGGGGAATTACTGG +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWWGYWL*PRGNYW
Trigger: CCAGTAATTCCCCCTTGGCAACAACCAATATCCCCA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATTCTCCATTTAATGCTTaGGAATCTGGGGATATTGGT +
Preference number: 5 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHSPFNA*ESGDIG
Trigger: ACCAATATCCCCAGATTCCAAAGCATTAAATGGAGA...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GACATAAGTCAATACTTAAAGCGGCAGCCCTTTGTAAGAGGTAACCCCAGGAATCTGATATCTGATATCTaGACTGAAAACTGTCTTGTC +
Preference number: 5 (lower is better)
Translates to: DISQYLKRQPFVRGNPRNLISDI*TENCLV
Trigger: GACAAGACAGTTTTCAGTCAAGATATCAGATATCAG...ATTCCTGGGGTTACCTCTTACAAAGGGCTGCCGCTTTAAGTATTGACTTATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGTTCCTCACAATGCCTGATATCTGATATCTaGACTGAAAACTGTCTTGTC +
Preference number: 5 (lower is better)
Translates to: QQAHRFVTKMSLHSSSQCLISDI*TENCLV
Trigger: GACAAGACAGTTTTCAGTCAAGATATCAGATATCAG...GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATTTATTATTTCCAAAGGAGCGACATGGTGATGGCATCCTATTTCTTTCCAATCTGTTCTCAATTTaGTCATCTGGCACCCGAGAG +
Preference number: 5 (lower is better)
Translates to: GYLLFPKERHGDGILFLSNLFSI*SSGTRE
Trigger: CTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT...GGAAAGAAATAGGATGCCATCACCATGTCGCTCCTTTGGAAATAATAAATATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGGTACTGTGAACCCCTaGTCAGTACATGTAAAAACT +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEGTVNP*SVHVKT
Trigger: AGTTTTTACATGTACTGACAAGGGGTTCACAGTACC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCAATACGCAACATCATaGATTCCACACGGTACTGTG +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFQYATS*IPHGTV
Trigger: CACAGTACCGTGTGGAATCAATGATGTTGCGTATTG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGAGGTACAGCCAAATTaGAACTCATCATACTTTCCC +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEEVQPN*NSSYFP
Trigger: GGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAAAAGCTACTCCATaGGGGGACACTGTGATATCA +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFTKATP*GDTVIS
Trigger: TGATATCACAGTGTCCCCCAATGGAGTAGCTTTTGT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TCTCAGAGAGGTACAGCCAAATTTGAACTCATCATACTTTCCCAAGTTCTCCACTTTCTTACTGAAGGCTaGACAAAAGCTACTCCATTG +
Preference number: 5 (lower is better)
Translates to: SQRGTAKFELIILSQVLHFLTEG*TKATPL
Trigger: CAATGGAGTAGCTTTTGTCAAGCCTTCAGTAAGAAA...GTGGAGAACTTGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTCTCTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GACTCGAAAGGTAAAGAGGGGAAAACGCTGATGAAGAACATGAAAGCTCACATTCTGTTTCTATTCCTTTaGCATCAAATACTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: DSKGKEGKTLMKNMKAHILFLFL*HQILGP
Trigger: AGGACCCAGTATTTGATGCAAAAGGAATAGAAACAG...AATGTGAGCTTTCATGTTCTTCATCAGCGTTTTCCCCTCTTTACCTTTCGAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGGCAAAGATAAAGTCTaGTATGCTGGCCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKGKDKV*YAGLSF
Trigger: GAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATAGGCAAAGATAAAGTCTaGTATGCTGGCCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: LCSCATSFSYTRINSLLIGKDKV*YAGLSF
Trigger: GAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCC...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGGCAAAGATAAAGTCTaGTATGCTGGCCTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFGKDKV*YAGLSF
Trigger: GAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACATGCAACATGCTGAGGTaGGCTCCGACATTTACTACA +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTCNMLR*APTFTT
Trigger: TGTAGTAAATGTCGGAGCCAACCTCAGCATGTTGCA...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCTCCCGGATTTCTTGGTaGAGGATGACTGCAACATGC +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSSRISW*RMTATC
Trigger: GCATGTTGCAGTCATCCTCAACCAAGAAATCCGGGA...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCAACTCCCGGATTTCTaGGTTGAGGATGACTGCAAC +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWQLPDF*VEDDCN
Trigger: GTTGCAGTCATCCTCAACCAAGAAATCCGGGAGTTG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTACAAGTTGCTCCTGTaGACGTTCCAACTCCCGGAT +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWYKLLL*TFQLPD
Trigger: ATCCGGGAGTTGGAACGTCAACAGGAGCAACTTGTA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGTTTCTTGAAACATACAGTTCTAAATCTTCACAGGCCACGTCTACAAGTTCACTTTACTCGGGAGAGTTaGAAAAGTACTGGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: CFLKHTVLNLHRPRLQVHFTRES*KSTGQF
Trigger: GAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAA...GTGAACTTGTAGACGTGGCCTGTGAAGATTTAGAACTGTATGTTTCAAGAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCGGAGATATGGTGCCTaGGACAATTCTCTATTTACT +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQRRYGA*DNSLFT
Trigger: AGTAAATAGAGAATTGTCCAAGGCACCATATCTCCG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TCTCAGAGAGGTACAGCCAAATTTGAACTCATCATACTTTCCCAAGTTCTCCACGTAACAAAAATGTCTTaGCACAGTTCCTCACAATGC +
Preference number: 5 (lower is better)
Translates to: SQRGTAKFELIILSQVLHVTKMS*HSSSQC
Trigger: GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTAC...GTGGAGAACTTGGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTCTCTGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTCTTGCAGGATCCAGTaGCATGCAATGTATTACTTT +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQSCRIQ*HAMYYF
Trigger: AAAGTAATACATTGCATGCAACTGGATCCTGCAAGA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGGGTTTCCACCAATTaGAGCTTCAATGTCCAGACG +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHRVSTN*SFNVQT
Trigger: CGTCTGGACATTGAAGCTCAAATTGGTGGAAACCCT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGCGACGATTCTCATTGCTATCTATGGTTGACTTCTCAAAAATTTCAGGACTTATCTGTTTCTTCGCCGTaGCTTTTCATCTTCCCATAT +
Preference number: 5 (lower is better)
Translates to: GDDSHCYLWLTSQKFQDLSVSSP*LFIFPY
Trigger: ATATGGGAAGATGAAAAGCAACGGCGAAGAAACAGA...TAAGTCCTGAAATTTTTGAGAAGTCAACCATAGATAGCAATGAGAATCGTCGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACAATGTTCTTCAATATaGCTGTCCCATCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTQCSSI*LSHLWD
Trigger: GTCCCAGAGATGGGACAGCAATATTGAAGAACATTG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTCTGAAAGCTTGCTTGTaGCAATTACAGAAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFLKACL*QLQKSG
Trigger: CCCACTCTTCTGTAATTGCAACAAGCAAGCTTTCAG...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACTGAAAGCTTGCTTGTaGCAATTACAGAAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTLKACL*QLQKSG
Trigger: CCCACTCTTCTGTAATTGCAACAAGCAAGCTTTCAG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGGGGAAGAAAGGGCACTaGTGTGTTTACACTGAAAGG +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWGKKGH*CVYTER
Trigger: CCTTTCAGTGTAAACACACAAGTGCCCTTTCTTCCC...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGGGAAGAAAGGGCACTaGTGTGTTTACACTGAAAGG +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHGKKGH*CVYTER
Trigger: CCTTTCAGTGTAAACACACAAGTGCCCTTTCTTCCC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATGTGAGTTACAAAACTaGACTCACTGTCTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNECELQN*THCLQS
Trigger: AGACTGAAGACAGTGAGTCAAGTTTTGTAACTCACA...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAAATGGGATATTTGGTaGCAGGGGAGTCGGGAACTT +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHKWDIW*QGSREL
Trigger: AAGTTCCCGACTCCCCTGCAACCAAATATCCCATTT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTAAATGGGATATTTGGTaGCAGGGGAGTCGGGAACTT +
Preference number: 5 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISKWDIW*QGSREL
Trigger: AAGTTCCCGACTCCCCTGCAACCAAATATCCCATTT...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTAGCCTCCAGAACTACTaGCAAATTCAGACACATTCT +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFSLQNY*QIQTHS
Trigger: AGAATGTGTCTGAATTTGCAAGTAGTTCTGGAGGCT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTTGCTCCCATGCTATTaGTTTGATTGGACTTCTCAA +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLLPCY*FDWTSQ
Trigger: TTGAGAAGTCCAATCAAACAAATAGCATGGGAGCAA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGCGACGATTCTCATTGCTATCTATGGTTGACTTCTCAAAAATTTCAGGACTTAAAAGCCCCTTTGCTTTaGCTCCCATGCTATTTGTTT +
Preference number: 5 (lower is better)
Translates to: GDDSHCYLWLTSQKFQDLKAPLL*LPCYLF
Trigger: AAACAAATAGCATGGGAGCAAAAGCAAAGGGGCTTT...TAAGTCCTGAAATTTTTGAGAAGTCAACCATAGATAGCAATGAGAATCGTCGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATAGTCCGTTTATTTGCTTaGTTATGCTCAAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: LCSCATSFSYTRINSLLIVRLFA*LCSREP
Trigger: TGGTTCCCTTGAGCATAACAAAGCAAATAAACGGAC...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTTGGCGACGATTCTCATaGCTATCTATGGTTGACTTC +
Preference number: 5 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFWRRFS*LSMVDF
Trigger: GAAGTCAACCATAGATAGCAATGAGAATCGTCGCCA...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTCTATTTTTCCACTGGTaGTGGCGACGATTCTCATTG +
Preference number: 5 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFLFFHW*WRRFSL
Trigger: CAATGAGAATCGTCGCCACAACCAGTGGAAAAATAG...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAGTGAACTATCAGGAGTaGGTGTCAACATATCATTGT +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEVNYQE*VSTYHC
Trigger: ACAATGATATGTTGACACCAACTCCTGATAGTTCAC...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACGACTTGGGGCACATTaGCAAGGCATAATCACAATT +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTRLGAH*QGIITI
Trigger: AATTGTGATTATGCCTTGCAAATGTGCCCCAAGTCG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGTTTTAGGCAGTTTCTaGGAACGTTCGTATTCTTCT +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQVLGSF*ERSYSS
Trigger: AGAAGAATACGAACGTTCCAAGAAACTGCCTAAAAC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAGACTTACATCCATTTTaGGAGGCACTACAGGTTTGT +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKDLHPF*EALQVC
Trigger: ACAAACCTGTAGTGCCTCCAAAAATGGATGTAAGTC...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGGACTTACATCCATTTTaGGAGGCACTACAGGTTTGT +
Preference number: 5 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQDLHPF*EALQVC
Trigger: ACAAACCTGTAGTGCCTCCAAAAATGGATGTAAGTC...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCTTATCAACATCCTCCTaGGTATGTGCTGTAGTGGGG +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSLSTSS*VCAVVG
Trigger: CCCCACTACAGCACATACCAAGGAGGATGTTGATAA...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTTTATCAACATCCTCCTaGGTATGTGCTGTAGTGGGG +
Preference number: 5 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISLSTSS*VCAVVG
Trigger: CCCCACTACAGCACATACCAAGGAGGATGTTGATAA...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTTATCAACATCCTCCTaGGTATGTGCTGTAGTGGGG +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWLSTSS*VCAVVG
Trigger: CCCCACTACAGCACATACCAAGGAGGATGTTGATAA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGACTACATCCCGTGGTaGGTGCTTGTAAAGCAATCT +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSDYIPW*VLVKQS
Trigger: AGATTGCTTTACAAGCACCAACCACGGGATGTAGTC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGGCATCTGACTTTCACTaGCAGTTTGACTACATCCCG +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWASDFH*QFDYIP
Trigger: CGGGATGTAGTCAAACTGCAAGTGAAAGTCAGATGC...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGATCTGGGGATATTGGTaGTTGCCAAGGGGGAATTAC +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWIWGYW*LPRGNY
Trigger: GTAATTCCCCCTTGGCAACAACCAATATCCCCAGAT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GACTCGAAAGGTAAAGAGGGGAAAACGCTGATGAAGAACATGAAAGCTCACATTCTGCAAATTGATTCTTaGCTTGTGTTAACAGTACTC +
Preference number: 5 (lower is better)
Translates to: DSKGKEGKTLMKNMKAHILQIDS*LVLTVL
Trigger: GAGTACTGTTAACACAAGCAAAGAATCAATTTGCAG...AATGTGAGCTTTCATGTTCTTCATCAGCGTTTTCCCCTCTTTACCTTTCGAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413831.1
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TTCCTTGGCAAAGATAAAGTCTTGTATGCTGGCCTTTCCTTCCAGAAGCTTCATCTGCAAATTGATTCTTaGCTTGTGTTAACAGTACTC +
Preference number: 5 (lower is better)
Translates to: FLGKDKVLYAGLSFQKLHLQIDS*LVLTVL
Trigger: GAGTACTGTTAACACAAGCAAAGAATCAATTTGCAG...ATGAAGCTTCTGGAAGGAAAGGCCAGCATACAAGACTTTATCTTTGCCAAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGAACAGAGCACAGATaGGGTCAAATTCAGGATCCG +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWRTEHR*GQIQDP
Trigger: CGGATCCTGAATTTGACCCAATCTGTGCTCTGTTCT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTAGAACAGAGCACAGATaGGGTCAAATTCAGGATCCG +
Preference number: 5 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISRTEHR*GQIQDP
Trigger: CGGATCCTGAATTTGACCCAATCTGTGCTCTGTTCT...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAGAACAGAGCACAGATaGGGTCAAATTCAGGATCCG +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHRTEHR*GQIQDP
Trigger: CGGATCCTGAATTTGACCCAATCTGTGCTCTGTTCT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAAATCTGTTCTCAATTTaGTCATCTGGCACCCGAGAG +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTNLFSI*SSGTRE
Trigger: CTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTACAAAAGCTACTCCATaGGGGGACACTGTGATATCA +
Preference number: 5 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFTKATP*GDTVIS
Trigger: TGATATCACAGTGTCCCCCAATGGAGTAGCTTTTGT...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACTGTTTCTATTCCTTTaGCATCAAATACTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNELFLFL*HQILGP
Trigger: AGGACCCAGTATTTGATGCAAAAGGAATAGAAACAG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCTGTTTCTATTCCTTTaGCATCAAATACTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLFLFL*HQILGP
Trigger: AGGACCCAGTATTTGATGCAAAAGGAATAGAAACAG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTGGCTGTGGGAGGCTAAGAAACACTTCTTTGCTTACTGAACTCCTATTCAATCAGAAGCTTCATACATaGTCGCTGAACATACTGTTT +
Preference number: 5 (lower is better)
Translates to: FGCGRLRNTSLLTELLFNQKLHT*SLNILF
Trigger: AAACAGTATGTTCAGCGACAATGTATGAAGCTTCTG...ATTGAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAGCCTCCCACAGCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACTGCAACATGCTGAGGTaGGCTCCGACATTTACTACA +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHCNMLR*APTFTT
Trigger: TGTAGTAAATGTCGGAGCCAACCTCAGCATGTTGCA...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTGCAACATGCTGAGGTaGGCTCCGACATTTACTACA +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWCNMLR*APTFTT
Trigger: TGTAGTAAATGTCGGAGCCAACCTCAGCATGTTGCA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGCATATCTTTACAAGTaGCTCCTGTTGACGTTCCAA +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFAYLYK*LLLTFQ
Trigger: TTGGAACGTCAACAGGAGCAACTTGTAAAGATATGC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCAACCTGTACAGTTCTaGCATATCTTTACAAGTTGC +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQQPVQF*HIFTSC
Trigger: GCAACTTGTAAAGATATGCAAGAACTGTACAGGTTG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TATTTTTCCACTGGTTGTGGCGACGATTCTCATTGCTATCTATGGTTGACTTCTCAACCTGTACAGTTCTaGCATATCTTTACAAGTTGC +
Preference number: 5 (lower is better)
Translates to: YFSTGCGDDSHCYLWLTSQPVQF*HIFTSC
Trigger: GCAACTTGTAAAGATATGCAAGAACTGTACAGGTTG...AGAAGTCAACCATAGATAGCAATGAGAATCGTCGCCACAACCAGTGGAAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAACGGAGATATGGTGCCTaGGACAATTCTCTATTTACT +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKRRYGA*DNSLFT
Trigger: AGTAAATAGAGAATTGTCCAAGGCACCATATCTCCG...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGGCAGTGGAAGATGGATaGCCTAAAGCCACATTAAGT +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWAVEDG*PKATLS
Trigger: ACTTAATGTGGCTTTAGGCAATCCATCTTCCACTGC...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGCAGTGGAAGATGGATaGCCTAAAGCCACATTAAGT +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHAVEDG*PKATLS
Trigger: ACTTAATGTGGCTTTAGGCAATCCATCTTCCACTGC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTCTTGCAGGATCCAGTaGCATGCAATGTATTACTTT +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFSCRIQ*HAMYYF
Trigger: AAAGTAATACATTGCATGCAACTGGATCCTGCAAGA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCCAATATTAAAGAGCTaGGTATTTCATCTTGTTCCC +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQPILKS*VFHLVP
Trigger: GGGAACAAGATGAAATACCAAGCTCTTTAATATTGG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACATCTGTTTCTTCGCCGTaGCTTTTCATCTTCCCATAT +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTSVSSP*LFIFPY
Trigger: ATATGGGAAGATGAAAAGCAACGGCGAAGAAACAGA...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCAATGTTCTTCAATATaGCTGTCCCATCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWQCSSI*LSHLWD
Trigger: GTCCCAGAGATGGGACAGCAATATTGAAGAACATTG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGGGTTTAACTGAAAGCTaGCTTGTTGCAATTACAGAA +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQGLTES*LVAITE
Trigger: TTCTGTAATTGCAACAAGCAAGCTTTCAGTTAAACC...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCTTCGTTTTCGGGATTaGAGAGTTCCATCTAAACTT +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFLRFRD*RVPSKL
Trigger: AAGTTTAGATGGAACTCTCAAATCCCGAAAACGAAG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAACTTCGTTTTCGGGATTaGAGAGTTCCATCTAAACTT +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKLRFRD*RVPSKL
Trigger: AAGTTTAGATGGAACTCTCAAATCCCGAAAACGAAG...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGATGCTTGGTCCAGCTTaGATTCTAGGGAATTGCGAT +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWMLGPA*ILGNCD
Trigger: ATCGCAATTCCCTAGAATCAAAGCTGGACCAAGCAT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAAGTTTCACTGTGCTTaGACTGTTCCGCTATGCACA +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHKFHCA*TVPLCT
Trigger: TGTGCATAGCGGAACAGTCAAAGCACAGTGAAACTT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAAGTTTCACTGTGCTTaGACTGTTCCGCTATGCACA +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWKFHCA*TVPLCT
Trigger: TGTGCATAGCGGAACAGTCAAAGCACAGTGAAACTT...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTCCCATGCTATTTGTTaGATTGGACTTCTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFSHAIC*IGLLKE
Trigger: TTCCTTGAGAAGTCCAATCAAACAAATAGCATGGGA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTTGCTCCCATGCTATTaGTTTGATTGGACTTCTCAA +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFLLPCY*FDWTSQ
Trigger: TTGAGAAGTCCAATCAAACAAATAGCATGGGAGCAA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACTTTGGTTTGTGAAATaGCTTCTGATAACGACCTCG +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTLWFVK*LLITTS
Trigger: CGAGGTCGTTATCAGAAGCAATTTCACAAACCAAAG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTCTTTGGTTTGTGAAATaGCTTCTGATAACGACCTCG +
Preference number: 5 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSLWFVK*LLITTS
Trigger: CGAGGTCGTTATCAGAAGCAATTTCACAAACCAAAG...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCAAATGCTGAAGGTGTaGACACATTTCGATTTTTAC +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQQMLKV*THFDFY
Trigger: GTAAAAATCGAAATGTGTCAACACCTTCAGCATTTG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACAAATGCTGAAGGTGTaGACACATTTCGATTTTTAC +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNEQMLKV*THFDFY
Trigger: GTAAAAATCGAAATGTGTCAACACCTTCAGCATTTG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAGTCCGTTTATTTGCTTaGTTATGCTCAAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTVRLFA*LCSREP
Trigger: TGGTTCCCTTGAGCATAACAAAGCAAATAAACGGAC...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCTATTTTTCCACTGGTaGTGGCGACGATTCTCATTG +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWLFFHW*WRRFSL
Trigger: CAATGAGAATCGTCGCCACAACCAGTGGAAAAATAG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGCTAAGAAACACTTCTTaGCTTACTGAACTCCTATTC +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQLRNTS*LTELLF
Trigger: GAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAG...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAACTAAGAAACACTTCTTaGCTTACTGAACTCCTATTC +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNELRNTS*LTELLF
Trigger: GAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAG...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGCAGTAAAAGAGGTATaGGCTGAGTCAAGAGACTGT +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHAVKEV*AESRDC
Trigger: ACAGTCTCTTGACTCAGCCAATACCTCTTTTACTGC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGCAGTAAAAGAGGTATaGGCTGAGTCAAGAGACTGT +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSAVKEV*AESRDC
Trigger: ACAGTCTCTTGACTCAGCCAATACCTCTTTTACTGC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGGTGAACTATCAGGAGTaGGTGTCAACATATCATTGT +
Preference number: 5 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQVNYQE*VSTYHC
Trigger: ACAATGATATGTTGACACCAACTCCTGATAGTTCAC...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp CTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTCAATTTTACTTGACCCTTTATaGACAACTCCTTGGCCACTG +
Preference number: 5 (lower is better)
Translates to: LIVYDPYSSLSAANLFSILLDPL*TTPWPL
Trigger: CAGTGGCCAAGGAGTTGTCAATAAAGGGTCAAGTAA...AATTGAGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACTTACTTGACCCTTTATaGACAACTCCTTGGCCACTG +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHLLDPL*TTPWPL
Trigger: CAGTGGCCAAGGAGTTGTCAATAAAGGGTCAAGTAA...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCTTACTTGACCCTTTATaGACAACTCCTTGGCCACTG +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSLLDPL*TTPWPL
Trigger: CAGTGGCCAAGGAGTTGTCAATAAAGGGTCAAGTAA...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCGACTTGGGGCACATTaGCAAGGCATAATCACAATT +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHRLGAH*QGIITI
Trigger: AATTGTGATTATGCCTTGCAAATGTGCCCCAAGTCG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGTATTCTTCTTTGGCTaGAAGCCACACTTGAACCAG +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSVFFFG*KPHLNQ
Trigger: CTGGTTCAAGTGTGGCTTCAAGCCAAAGAAGAATAC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTGTTTTAGGCAGTTTCTaGGAACGTTCGTATTCTTCT +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFVLGSF*ERSYSS
Trigger: AGAAGAATACGAACGTTCCAAGAAACTGCCTAAAAC...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATTTATTATTTCCAAAGGAGCGACATGGTGATGGCATCCTATTTCTTTCCGTTTTAGGCAGTTTCTaGGAACGTTCGTATTCTTCT +
Preference number: 5 (lower is better)
Translates to: GYLLFPKERHGDGILFLSVLGSF*ERSYSS
Trigger: AGAAGAATACGAACGTTCCAAGAAACTGCCTAAAAC...GGAAAGAAATAGGATGCCATCACCATGTCGCTCCTTTGGAAATAATAAATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACACAACTCCAGTTGGCTaGGTTTTAGGCAGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHTTPVG*VLGSFL
Trigger: CAAGAAACTGCCTAAAACCAAGCCAACTGGAGTTGT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTCTCCATTTAATGCTTaGGAATCTGGGGATATTGGT +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFSPFNA*ESGDIG
Trigger: ACCAATATCCCCAGATTCCAAAGCATTAAATGGAGA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTCAACTTCTGTGTTTTaGGTTCTGTTGATAATGGGC +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFSTSVF*VLLIMG
Trigger: GCCCATTATCAACAGAACCAAAAACACAGAAGTTGA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAATCAACTTCTGTGTTTTaGGTTCTGTTGATAATGGGC +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKSTSVF*VLLIMG
Trigger: GCCCATTATCAACAGAACCAAAAACACAGAAGTTGA...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AAATGTCTTTGCACAGTTCCTCACAATGCCCCATTAATAGCTAAAGCAAGACAGTCTCATGTAAAGCTTTaGCCTCCTGTAAGTTTTGTA +
Preference number: 5 (lower is better)
Translates to: KCLCTVPHNAPLIAKARQSHVKL*PPVSFV
Trigger: TACAAAACTTACAGGAGGCAAAAGCTTTACATGAGA...CTGTCTTGCTTTAGCTATTAATGGGGCATTGTGAGGAACTGTGCAAAGACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAATCTGTTCTCAATTTaGTCATCTGGCACCCGAGAG +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHNLFSI*SSGTRE
Trigger: CTCTCGGGTGCCAGATGACAAAATTGAGAACAGATT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCAATACGCAACATCATaGATTCCACACGGTACTGTG +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHQYATS*IPHGTV
Trigger: CACAGTACCGTGTGGAATCAATGATGTTGCGTATTG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCACAAAAGCTACTCCATaGGGGGACACTGTGATATCA +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSTKATP*GDTVIS
Trigger: TGATATCACAGTGTCCCCCAATGGAGTAGCTTTTGT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTTTTCTTACTGAAGGCTaGACAAAAGCTACTCCATTG +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFFLTEG*TKATPL
Trigger: CAATGGAGTAGCTTTTGTCAAGCCTTCAGTAAGAAA...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGTTTCTTGAAACATACAGTTCTAAATCTTCACAGGCCACGTCTACAAGTTCACTTTCTTACTGAAGGCTaGACAAAAGCTACTCCATTG +
Preference number: 5 (lower is better)
Translates to: CFLKHTVLNLHRPRLQVHFLTEG*TKATPL
Trigger: CAATGGAGTAGCTTTTGTCAAGCCTTCAGTAAGAAA...GTGAACTTGTAGACGTGGCCTGTGAAGATTTAGAACTGTATGTTTCAAGAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACTTCACTGGTTTAGGATaGGTAGCAGTTACAGCTTCG +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHFTGLG*VAVTAS
Trigger: CGAAGCTGTAACTGCTACCAATCCTAAACCAGTGAA...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCAGAAGCTTCATACATaGTCGCTGAACATACTGTTT +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFQKLHT*SLNILF
Trigger: AAACAGTATGTTCAGCGACAATGTATGAAGCTTCTG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTCAAGGGTGGAAGGATTaGCTTGGTAATATAGTAAGT +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFQGWKD*LGNIVS
Trigger: ACTTACTATATTACCAAGCAAATCCTTCCACCCTTG...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAACAAGGGTGGAAGGATTaGCTTGGTAATATAGTAAGT +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKQGWKD*LGNIVS
Trigger: ACTTACTATATTACCAAGCAAATCCTTCCACCCTTG...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGCAACCTGTACAGTTCTaGCATATCTTTACAAGTTGC +
Preference number: 5 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQQPVQF*HIFTSC
Trigger: GCAACTTGTAAAGATATGCAAGAACTGTACAGGTTG...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTTTACTCGGGAGAGTTaGAAAAGTACTGGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWFTRES*KSTGQF
Trigger: GAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACTTTACTCGGGAGAGTTaGAAAAGTACTGGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHFTRES*KSTGQF
Trigger: GAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAA...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCTTTACTCGGGAGAGTTaGAAAAGTACTGGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSFTRES*KSTGQF
Trigger: GAACTGCCCAGTACTTTTCAAACTCTCCCGAGTAAA...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTCGGAGATATGGTGCCTaGGACAATTCTCTATTTACT +
Preference number: 5 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSRRYGA*DNSLFT
Trigger: AGTAAATAGAGAATTGTCCAAGGCACCATATCTCCG...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AGAGGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAAACGTGGTACTACTGTTaGCACAGTTTGATCAAAATA +
Preference number: 5 (lower is better)
Translates to: RGFQCSFHWEVNMIYSNETWYYC*HSLIKI
Trigger: TATTTTGATCAAACTGTGCAAACAGTAGTACCACGT...TTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCATTATGGCTCCGCTTaGCAAAAGTTCACATATCCT +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHHYGSA*QKFTYP
Trigger: AGGATATGTGAACTTTTGCAAAGCGGAGCCATAATG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCTTGCTTTTCGGAACTaGACAGCAGCCAGATTTATT +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWLAFRN*TAARFI
Trigger: AATAAATCTGGCTGCTGTCAAGTTCCGAAAAGCAAG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCTTGCTTTTCGGAACTaGACAGCAGCCAGATTTATT +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHLAFRN*TAARFI
Trigger: AATAAATCTGGCTGCTGTCAAGTTCCGAAAAGCAAG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCTCTGTTTCTTCGCCGTaGCTTTTCATCTTCCCATAT +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSSVSSP*LFIFPY
Trigger: ATATGGGAAGATGAAAAGCAACGGCGAAGAAACAGA...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGCGACGATTCTCATTGCTATCTATGGTTGACTTCTCAAAAATTTCAGGACTTAGGTTTAACTGAAAGCTaGCTTGTTGCAATTACAGAA +
Preference number: 5 (lower is better)
Translates to: GDDSHCYLWLTSQKFQDLGLTES*LVAITE
Trigger: TTCTGTAATTGCAACAAGCAAGCTTTCAGTTAAACC...TAAGTCCTGAAATTTTTGAGAAGTCAACCATAGATAGCAATGAGAATCGTCGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTAACCGGGATGGTTTATaGCCAGGTTGTAATTTATAT +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFNRDGL*PGCNLY
Trigger: ATATAAATTACAACCTGGCAATAAACCATCCCGGTT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAAAAGAATTTATGGGACTaGTGCTTCTCTCAGAAAGAA +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKKNLWD*CFSQKE
Trigger: TTCTTTCTGAGAGAAGCACAAGTCCCATAAATTCTT...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTAGTAAACATAGCACTTaGATTATGAGGCCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFSKHST*IMRPLN
Trigger: GTTCAAAGGCCTCATAATCAAAGTGCTATGTTTACT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CTGTGCTCTTGCGCGACTAGTTTTTCCTATACGAGAATTAACAGTCTTCTTATAAGTAAACATAGCACTTaGATTATGAGGCCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: LCSCATSFSYTRINSLLISKHST*IMRPLN
Trigger: GTTCAAAGGCCTCATAATCAAAGTGCTATGTTTACT...TATAAGAAGACTGTTAATTCTCGTATAGGAAAAACTAGTCGCGCAAGAGCACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTAAAGCCCCTTTGCTTTaGCTCCCATGCTATTTGTTT +
Preference number: 5 (lower is better)
Translates to: LSHSLYMIHTHLFQLQICKAPLL*LPCYLF
Trigger: AAACAAATAGCATGGGAGCAAAAGCAAAGGGGCTTT...ACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCATCGTGTCCGTTTATTaGCTTTGTTATGCTCAAGGG +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSIVSVY*LCYAQG
Trigger: CCCTTGAGCATAACAAAGCAAATAAACGGACACGAT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CGGCCAACAATATTTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCAATCGTGTCCGTTTATTaGCTTTGTTATGCTCAAGGG +
Preference number: 5 (lower is better)
Translates to: RPTIFISLIVYDPYSSLSIVSVY*LCYAQG
Trigger: CCCTTGAGCATAACAAAGCAAATAAACGGACACGAT...TGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAAATATTGTTGGCCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGGACTTACATCCATTTTaGGAGGCACTACAGGTTTGT +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWDLHPF*EALQVC
Trigger: ACAAACCTGTAGTGCCTCCAAAAATGGATGTAAGTC...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACATCTCCATTTAATGCTTaGGAATCTGGGGATATTGGT +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTSPFNA*ESGDIG
Trigger: ACCAATATCCCCAGATTCCAAAGCATTAAATGGAGA...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGATATTTATTATTTCCAAAGGAGCGACATGGTGATGGCATCCTATTTCTTTCCTCTCATGTAAAGCTTTaGCCTCCTGTAAGTTTTGTA +
Preference number: 5 (lower is better)
Translates to: GYLLFPKERHGDGILFLSSHVKL*PPVSFV
Trigger: TACAAAACTTACAGGAGGCAAAAGCTTTACATGAGA...GGAAAGAAATAGGATGCCATCACCATGTCGCTCCTTTGGAAATAATAAATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GATGACCTGCAAGTTTCCTTTTATTCAATTTTAACCGGGATGGTTTATTGCCAGTCTCATGTAAAGCTTTaGCCTCCTGTAAGTTTTGTA +
Preference number: 5 (lower is better)
Translates to: DDLQVSFYSILTGMVYCQSHVKL*PPVSFV
Trigger: TACAAAACTTACAGGAGGCAAAAGCTTTACATGAGA...CTGGCAATAAACCATCCCGGTTAAAATTGAATAAAAGGAAACTTGCAGGTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp GGATATCTCGAAGTAACACGTCTTGATACAGACAGTTCAAGGAAAACACACAAACTGATATCTGATATCTaGACTGAAAACTGTCTTGTC +
Preference number: 5 (lower is better)
Translates to: GYLEVTRLDTDSSRKTHKLISDI*TENCLV
Trigger: GACAAGACAGTTTTCAGTCAAGATATCAGATATCAG...TTTGTGTGTTTTCCTTGAACTGTCTGTATCAAGACGTGTTACTTCGAGATATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGGTACTGTGAACCCCTaGTCAGTACATGTAAAAACT +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSGTVNP*SVHVKT
Trigger: AGTTTTTACATGTACTGACAAGGGGTTCACAGTACC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGGTACTGTGAACCCCTaGTCAGTACATGTAAAAACT +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHGTVNP*SVHVKT
Trigger: AGTTTTTACATGTACTGACAAGGGGTTCACAGTACC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTGGTACTGTGAACCCCTaGTCAGTACATGTAAAAACT +
Preference number: 5 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISGTVNP*SVHVKT
Trigger: AGTTTTTACATGTACTGACAAGGGGTTCACAGTACC...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGAGGTACAGCCAAATTaGAACTCATCATACTTTCCC +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSEVQPN*NSSYFP
Trigger: GGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGAGGTACAGCCAAATTaGAACTCATCATACTTTCCC +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHEVQPN*NSSYFP
Trigger: GGGAAAGTATGATGAGTTCAAATTTGGCTGTACCTC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACCACATACCTCTTTTTaGTTTGTAAAACACAGGGCA +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTPHTSF*FVKHRA
Trigger: TGCCCTGTGTTTTACAAACAAAAAAGAGGTATGTGG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACACAAGGGTGGAAGGATTaGCTTGGTAATATAGTAAGT +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTQGWKD*LGNIVS
Trigger: ACTTACTATATTACCAAGCAAATCCTTCCACCCTTG...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGGCATATCTTTACAAGTaGCTCCTGTTGACGTTCCAA +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWAYLYK*LLLTFQ
Trigger: TTGGAACGTCAACAGGAGCAACTTGTAAAGATATGC...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCGCATATCTTTACAAGTaGCTCCTGTTGACGTTCCAA +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSAYLYK*LLLTFQ
Trigger: TTGGAACGTCAACAGGAGCAACTTGTAAAGATATGC...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTGCATATCTTTACAAGTaGCTCCTGTTGACGTTCCAA +
Preference number: 5 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISAYLYK*LLLTFQ
Trigger: TTGGAACGTCAACAGGAGCAACTTGTAAAGATATGC...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCGGAGATATGGTGCCTaGGACAATTCTCTATTTACT +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHRRYGA*DNSLFT
Trigger: AGTAAATAGAGAATTGTCCAAGGCACCATATCTCCG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GGTTTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACGTGGTACTACTGTTaGCACAGTTTGATCAAAATA +
Preference number: 5 (lower is better)
Translates to: GFQCSFHWEVNMIYSNEFTWYYC*HSLIKI
Trigger: TATTTTGATCAAACTGTGCAAACAGTAGTACCACGT...AAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS TCA 90 bp TTTGCTATTGTGAATAGTGCCGCAATAAATCCCCTTGGTAATTCATaGTACCAGCTGAAGACATCAATACCAATAAGTGAGAAGATTCTT +
Preference number: 5 (lower is better)
Translates to: FAIVNSAAINPLGNS*YQLKTSIPISEKIL
Trigger: AAGAATCTTCTCACTTATTGGTATTGATGTCTTCAGCTGGTATCATGAATTACCAAGGGGATTTATTGCGGCACTATTCACAATAGCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462119.5
ENST00000619481.1
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAAACCGGGATGGTTTATaGCCAGGTTGTAATTTATAT +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTNRDGL*PGCNLY
Trigger: ATATAAATTACAACCTGGCAATAAACCATCCCGGTT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTCAATTTGTGAGTTACAAAACTaGACTCACTGTCTTCAGTCT +
Preference number: 5 (lower is better)
Translates to: LIVYDPYSSLSAANLFSICELQN*THCLQS
Trigger: AGACTGAAGACAGTGAGTCAAGTTTTGTAACTCACA...AATTGAGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCTTCGTTTTCGGGATTaGAGAGTTCCATCTAAACTT +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHLRFRD*RVPSKL
Trigger: AAGTTTAGATGGAACTCTCAAATCCCGAAAACGAAG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCTTCGTTTTCGGGATTaGAGAGTTCCATCTAAACTT +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWLRFRD*RVPSKL
Trigger: AAGTTTAGATGGAACTCTCAAATCCCGAAAACGAAG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAAAGAATTTATGGGACTaGTGCTTCTCTCAGAAAGAA +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTKNLWD*CFSQKE
Trigger: TTCTTTCTGAGAGAAGCACAAGTCCCATAAATTCTT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TCTCACTCATTGTATATGATCCATACTCATCTCTTTCAGCTGCAAATCTGTTCTAAGAATTTATGGGACTaGTGCTTCTCTCAGAAAGAA +
Preference number: 5 (lower is better)
Translates to: SHSLYMIHTHLFQLQICSKNLWD*CFSQKE
Trigger: TTCTTTCTGAGAGAAGCACAAGTCCCATAAATTCTT...AGAACAGATTTGCAGCTGAAAGAGATGAGTATGGATCATATACAATGAGTGAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGTAAACATAGCACTTaGATTATGAGGCCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTSKHST*IMRPLN
Trigger: GTTCAAAGGCCTCATAATCAAAGTGCTATGTTTACT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTAGTAAACATAGCACTTaGATTATGAGGCCTTTGAAC +
Preference number: 5 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFSKHST*IMRPLN
Trigger: GTTCAAAGGCCTCATAATCAAAGTGCTATGTTTACT...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTCCCATGCTATTTGTTaGATTGGACTTCTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWSHAIC*IGLLKE
Trigger: TTCCTTGAGAAGTCCAATCAAACAAATAGCATGGGA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTTGCTCCCATGCTATTaGTTTGATTGGACTTCTCAA +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWLLPCY*FDWTSQ
Trigger: TTGAGAAGTCCAATCAAACAAATAGCATGGGAGCAA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTCAAATGCTGAAGGTGTaGACACATTTCGATTTTTAC +
Preference number: 5 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFQMLKV*THFDFY
Trigger: GTAAAAATCGAAATGTGTCAACACCTTCAGCATTTG...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGGTGAACTATCAGGAGTaGGTGTCAACATATCATTGT +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWVNYQE*VSTYHC
Trigger: ACAATGATATGTTGACACCAACTCCTGATAGTTCAC...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGTGAACTATCAGGAGTaGGTGTCAACATATCATTGT +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHVNYQE*VSTYHC
Trigger: ACAATGATATGTTGACACCAACTCCTGATAGTTCAC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGGTTTTAGGCAGTTTCTaGGAACGTTCGTATTCTTCT +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWVLGSF*ERSYSS
Trigger: AGAAGAATACGAACGTTCCAAGAAACTGCCTAAAAC...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CGATCGTGTCCGTTTATTTGCTTTGTTATGCTCAAGGGAACCAGAAATATTTTTCTGCAAATTGATTCTTaGCTTGTGTTAACAGTACTC +
Preference number: 5 (lower is better)
Translates to: RSCPFICFVMLKGTRNIFLQIDS*LVLTVL
Trigger: GAGTACTGTTAACACAAGCAAAGAATCAATTTGCAG...AAAAATATTTCTGGTTCCCTTGAGCATAACAAAGCAAATAAACGGACACGATCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACATCTCATGTAAAGCTTTaGCCTCCTGTAAGTTTTGTA +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTSHVKL*PPVSFV
Trigger: TACAAAACTTACAGGAGGCAAAAGCTTTACATGAGA...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTTTCTTACTGAAGGCTaGACAAAAGCTACTCCATTG +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWFLTEG*TKATPL
Trigger: CAATGGAGTAGCTTTTGTCAAGCCTTCAGTAAGAAA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp CGGCCAACAATATTTATCTCACTCATTGTATATGATCCATACTCATCTCTTTCACCACATACCTCTTTTTaGTTTGTAAAACACAGGGCA +
Preference number: 5 (lower is better)
Translates to: RPTIFISLIVYDPYSSLSPHTSF*FVKHRA
Trigger: TGCCCTGTGTTTTACAAACAAAAAAGAGGTATGTGG...TGAAAGAGATGAGTATGGATCATATACAATGAGTGAGATAAATATTGTTGGCCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCCCACATACCTCTTTTTaGTTTGTAAAACACAGGGCA +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSPHTSF*FVKHRA
Trigger: TGCCCTGTGTTTTACAAACAAAAAAGAGGTATGTGG...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCAGAAGCTTCATACATaGTCGCTGAACATACTGTTT +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHQKLHT*SLNILF
Trigger: AAACAGTATGTTCAGCGACAATGTATGAAGCTTCTG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCCAACCTGTACAGTTCTaGCATATCTTTACAAGTTGC +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSQPVQF*HIFTSC
Trigger: GCAACTTGTAAAGATATGCAAGAACTGTACAGGTTG...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCAACCTGTACAGTTCTaGCATATCTTTACAAGTTGC +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHQPVQF*HIFTSC
Trigger: GCAACTTGTAAAGATATGCAAGAACTGTACAGGTTG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TTTCAGTGCTCCTTCCACTGGGAAGTAAACATGATCTACTCAAATGAATTTACAACGTGGTACTACTGTTaGCACAGTTTGATCAAAATA +
Preference number: 5 (lower is better)
Translates to: FQCSFHWEVNMIYSNEFTTWYYC*HSLIKI
Trigger: TATTTTGATCAAACTGTGCAAACAGTAGTACCACGT...TGTAAATTCATTTGAGTAGATCATGTTTACTTCCCAGTGGAAGGAGCACTGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGTAACAAAAATGTCTTaGCACAGTTCCTCACAATGC +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHVTKMS*HSSSQC
Trigger: GCATTGTGAGGAACTGTGCAAAGACATTTTTGTTAC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp GCTTCTGATAACGACCTCGGTTTTACTCTTTCAGGTTTAAAATTTGACATATCTCCAATATTAAAGAGCTaGGTATTTCATCTTGTTCCC +
Preference number: 5 (lower is better)
Translates to: ASDNDLGFTLSGLKFDISPILKS*VFHLVP
Trigger: GGGAACAAGATGAAATACCAAGCTCTTTAATATTGG...AGATATGTCAAATTTTAAACCTGAAAGAGTAAAACCGAGGTCGTTATCAGAAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000422377.5
ENST00000434009.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACGGTTTAACTGAAAGCTaGCTTGTTGCAATTACAGAA +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHGLTES*LVAITE
Trigger: TTCTGTAATTGCAACAAGCAAGCTTTCAGTTAAACC...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACAACCGGGATGGTTTATaGCCAGGTTGTAATTTATAT +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHNRDGL*PGCNLY
Trigger: ATATAAATTACAACCTGGCAATAAACCATCCCGGTT...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp AACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGAGCAAATCCAAGAATTTATGGGACTaGTGCTTCTCTCAGAAAGAA +
Preference number: 5 (lower is better)
Translates to: NMIYSNEFTRWYTYWSKSKNLWD*CFSQKE
Trigger: TTCTTTCTGAGAGAAGCACAAGTCCCATAAATTCTT...GGATTTGCTCCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCAAATGCTGAAGGTGTaGACACATTTCGATTTTTAC +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHQMLKV*THFDFY
Trigger: GTAAAAATCGAAATGTGTCAACACCTTCAGCATTTG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp ATTTTTAAAGTATTGCAACAGGCCCACAGGTTTGTAACAAAAATGTCTTTGCACCTAAGAAACACTTCTTaGCTTACTGAACTCCTATTC +
Preference number: 5 (lower is better)
Translates to: IFKVLQQAHRFVTKMSLHLRNTS*LTELLF
Trigger: GAATAGGAGTTCAGTAAGCAAAGAAGTGTTTCTTAG...GTGCAAAGACATTTTTGTTACAAACCTGTGGGCCTGTTGCAATACTTTAAAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCTGCAAATTGATTCTTaGCTTGTGTTAACAGTACTC +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWLQIDS*LVLTVL
Trigger: GAGTACTGTTAACACAAGCAAAGAATCAATTTGCAG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGTCTCATGTAAAGCTTTaGCCTCCTGTAAGTTTTGTA +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWSHVKL*PPVSFV
Trigger: TACAAAACTTACAGGAGGCAAAAGCTTTACATGAGA...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS-3UTR CAA 90 bp TGGGAAGTAAACATGATCTACTCAAATGAATTTACAAGATGGTACACATACTGGCTGATATCTGATATCTaGACTGAAAACTGTCTTGTC +
Preference number: 5 (lower is better)
Translates to: WEVNMIYSNEFTRWYTYWLISDI*TENCLV
Trigger: GACAAGACAGTTTTCAGTCAAGATATCAGATATCAG...CCAGTATGTGTACCATCTTGTAAATTCATTTGAGTAGATCATGTTTACTTCCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000434009.5
ENST00000435970.5
CDS GCA 72 bp CACCTCGAGGAGCGGCGGGCGGGGCGGTGTAGGCGCTaGTGCCGCCGCCTCCTCAGGAGCACCCGGCAAGGG +
Preference number: 6 (lower is better)
Translates to: HLEERRAGRCRR*CRRLLRSTRQG
Trigger: CCCTTGCCGGGTGCTCCTGAGGAGGCGGCGGCAGCAGCGCCTACACCGCCCCGCCCGCCGCTCCTCGAGGTG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS GCA 72 bp GGGGCCGCAGGAGAGAAGCCCTCGAGCTTTCGTCGGTaGTGGTGCTGCCGCCACTGCCGCCACCGCCGGGAA +
Preference number: 6 (lower is better)
Translates to: GAAGEKPSSFRR*WCCRHCRHRRE
Trigger: TTCCCGGCGGTGGCGGCAGTGGCGGCAGCACCAGCACCGACGAAAGCTCGAGGGCTTCTCTCCTGCGGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS GCA 72 bp CCCTCGAGCTTTCGTCGGTGCTGGTGCTGCCGCCACTaGCGCCACCGCCGGGAATCACACGGGCTCCTCGGT +
Preference number: 6 (lower is better)
Translates to: PSSFRRCWCCRH*RHRRESHGLLG
Trigger: ACCGAGGAGCCCGTGTGATTCCCGGCGGTGGCGGCAGTGGCGGCAGCACCAGCACCGACGAAAGCTCGAGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS GCA 72 bp GGAGAGAAGCCCTCGAGCTTTCGTCGGTGCTGGTGCTaGCGCCACTGCCGCCACCGCCGGGAATCACACGGG +
Preference number: 6 (lower is better)
Translates to: GEKPSSFRRCWC*RHCRHRRESHG
Trigger: CCCGTGTGATTCCCGGCGGTGGCGGCAGTGGCGGCAGCACCAGCACCGACGAAAGCTCGAGGGCTTCTCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS CCA 72 bp GCCGCAGGAGAGAAGCCCTCGAGCTTTCGTCGGTGCTaGTGCTGCCGCCACTGCCGCCACCGCCGGGAATCA +
Preference number: 6 (lower is better)
Translates to: AAGEKPSSFRRC*CCRHCRHRRES
Trigger: TGATTCCCGGCGGTGGCGGCAGTGGCGGCAGCACCAGCACCGACGAAAGCTCGAGGGCTTCTCTCCTGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358835.7
ENST00000368802.8
ENST00000422377.5
ENST00000435970.5
CDS GCA 72 bp CACACGGGCTCCTCGGTCCCAGGCTGCAGCTCTTGTTaGCATGATGATGATGTCACGGACGCAACCACTCGC +
Preference number: 6 (lower is better)
Translates to: HTGSSVPGCSSC*HDDDVTDATTR
Trigger: GCGAGTGGTTGCGTCCGTGACATCATCATCATGGCAACAAGAGCTGCAGCCTGGGACCGAGGAGCCCGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358835.7
ENST00000422377.5
ENST00000435970.5
CDS GCA 72 bp ACCGCCGGGAATCACACGGGCTCCTCGGTCCCAGGCTaGAGCTCTTGTTGCCATGATGATGATGTCACGGAC +
Preference number: 6 (lower is better)
Translates to: TAGNHTGSSVPG*SSCCHDDDVTD
Trigger: GTCCGTGACATCATCATCATGGCAACAAGAGCTGCAGCCTGGGACCGAGGAGCCCGTGTGATTCCCGGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358835.7
ENST00000422377.5
ENST00000435970.5
CDS TCA 72 bp GTGAATAGTGCCGCAATAAATCCCCTTGGTAATTCATaGTACCAGCTGAAGACATCAATACCAATAAGTGAG +
Preference number: 6 (lower is better)
Translates to: VNSAAINPLGNS*YQLKTSIPISE
Trigger: CTCACTTATTGGTATTGATGTCTTCAGCTGGTATCATGAATTACCAAGGGGATTTATTGCGGCACTATTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462119.5
ENST00000619481.1