RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for REV1 (Homo sapiens)

Ensembl gene IDs: ENSG00000135945

Ensembl transcript IDs: ENST00000258428.8, ENST00000393445.7, ENST00000413697.5, ENST00000438366.1, ENST00000450415.1, ENST00000465086.1, ENST00000472000.1, ENST00000473819.1, ENST00000481719.1, ENST00000482887.1, ENST00000486117.1, ENST00000491752.1

Found 615 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACAGCCAGCTGGGTCAGACTGCAAACTAGAAAGGCCTGGCACACCTaGAGTAGAAGCAGAGAGTTCTTCCAGGGGTTTCTCTGCAGGAGG +
Preference number: 1 (lower is better)
Translates to: TASWVRLQTRKAWHT*SRSREFFQGFLCRR
Trigger: CCTCCTGCAGAGAAACCCCTGGAAGAACTCTCTGCTTCTACTTCAGGTGTGCCAGGCCTTTCTAGTTTGCAGTCTGACCCAGCTGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 90 bp GCTAGATTGGGTGCTGGAGGTCTCACACAGCCAGCTGGGTCAGACTaGAAACTAGAAAGGCCTGGCACACCTGAAGTAGAAGCAGAGAGT +
Preference number: 1 (lower is better)
Translates to: ARLGAGGLTQPAGSD*KLERPGTPEVEAES
Trigger: ACTCTCTGCTTCTACTTCAGGTGTGCCAGGCCTTTCTAGTTTGCAGTCTGACCCAGCTGGCTGTGTGAGACCTCCAGCACCCAATCTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 90 bp GAGCTAGGAGTGTGTCCATTAAAAATGGCAGTGCTCCCTCTGGGATaGGGAATTCCATTCTGTTTCCTTCCCGGAGAGGTCTGCTCCAGA +
Preference number: 1 (lower is better)
Translates to: ELGVCPLKMAVLPLG*GIPFCFLPGEVCSR
Trigger: TCTGGAGCAGACCTCTCCGGGAAGGAAACAGAATGGAATTCCGCATCCCAGAGGGAGCACTGCCATTTTTAATGGACACACTCCTAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 90 bp CTGGTGAGTGCTGTTCTCGCCCTGCCTTTGTCTTTGATCATACGCTaGTTTCAGCTCCCTCTGAAGTTCAGCAGGAAGGGCAGCAAATAC +
Preference number: 1 (lower is better)
Translates to: LVSAVLALPLSLIIR*FQLPLKFSRKGSKY
Trigger: GTATTTGCTGCCCTTCCTGCTGAACTTCAGAGGGAGCTGAAAGCAGCGTATGATCAAAGACAAAGGCAGGGCGAGAACAGCACTCACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 90 bp GTAAAGGATTCTTTGGCACAGATGCGCTGGCTGACTGCTGGTGAGTaGTGTTCTCGCCCTGCCTTTGTCTTTGATCATACGCTGCTTTCA +
Preference number: 1 (lower is better)
Translates to: VKDSLAQMRWLTAGE*CSRPAFVFDHTLLS
Trigger: TGAAAGCAGCGTATGATCAAAGACAAAGGCAGGGCGAGAACAGCACTCACCAGCAGTCAGCCAGCGCATCTGTGCCAAAGAATCCTTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 90 bp GGATTCCGCAAAGCATCTGTGTTTCTGGTGCTTTGCTGCAACTGCTaGAGAGTGCAGTCTCTGAAATCAGTGCTGCTCTTCTCAGCCTTA +
Preference number: 1 (lower is better)
Translates to: GFRKASVFLVLCCNC*RVQSLKSVLLFSAL
Trigger: TAAGGCTGAGAAGAGCAGCACTGATTTCAGAGACTGCACTCTGCAGCAGTTGCAGCAAAGCACCAGAAACACAGATGCTTTGCGGAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 90 bp GTTCTGTGTGGATTCCGCAAAGCATCTGTGTTTCTGGTGCTTTGCTaGAACTGCTGCAGAGTGCAGTCTCTGAAATCAGTGCTGCTCTTC +
Preference number: 1 (lower is better)
Translates to: VLCGFRKASVFLVLC*NCCRVQSLKSVLLF
Trigger: GAAGAGCAGCACTGATTTCAGAGACTGCACTCTGCAGCAGTTGCAGCAAAGCACCAGAAACACAGATGCTTTGCGGAATCCACACAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 90 bp AGCTGGGAAGGTGACGGGACCTCTATACTCAGGTTAAGTCTCGACTaGACACTGACAGGAGTATGTAGACCATTCCATTTCCCTGAAGAC +
Preference number: 1 (lower is better)
Translates to: SWEGDGTSILRLSLD*TLTGVCRPFHFPED
Trigger: GTCTTCAGGGAAATGGAATGGTCTACATACTCCTGTCAGTGTGCAGTCGAGACTTAACCTGAGTATAGAGGTCCCGTCACCTTCCCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR TCA 90 bp AAGACATCACGGACAGAGTATGACCCACTAGGAAAGTGGCTTGACTaGACTGATGGGCGACTGGGACATGTGGAAGGGTTCAGATTAGTT +
Preference number: 1 (lower is better)
Translates to: KTSRTEYDPLGKWLD*TDGRLGHVEGFRLV
Trigger: AACTAATCTGAACCCTTCCACATGTCCCAGTCGCCCATCAGTTCAGTCAAGCCACTTTCCTAGTGGGTCATACTCTGTCCGTGATGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 90 bp CAGCCATTTACTGGTTCTTTCTTTTTGTCGCCATGTGACTCTGCTTaGTGGACAGCACAGACTTGCTCTACTTGTTCCCGGAGATCAGGT +
Preference number: 1 (lower is better)
Translates to: QPFTGSFFLSPCDSA*WTAQTCSTCSRRSG
Trigger: ACCTGATCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAGCAAGCAGAGTCACATGGCGACAAAAAGAAAGAACCAGTAAATGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CCA 90 bp GCTGAGACCTTTCTGCACACTGGACTGCTTGGTGTACAGCTGATATaGAATGTAGGAGAGGAGTCGTCCAGCTTTGATGCTTTCCACAAT +
Preference number: 1 (lower is better)
Translates to: AETFLHTGLLGVQLI*NVGEESSSFDAFHN
Trigger: ATTGTGGAAAGCATCAAAGCTGGACGACTCCTCTCCTACATTCCATATCAGCTGTACACCAAGCAGTCCAGTGTGCAGAAAGGTCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CCA 90 bp CCATTTACTGGTTCTTTCTTTTTGTCGCCATGTGACTCTGCTTGCTaGACAGCACAGACTTGCTCTACTTGTTCCCGGAGATCAGGTGGA +
Preference number: 1 (lower is better)
Translates to: PFTGSFFLSPCDSAC*TAQTCSTCSRRSGG
Trigger: TCCACCTGATCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAGCAAGCAGAGTCACATGGCGACAAAAAGAAAGAACCAGTAAATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 90 bp TTCTTTTTGTCGCCATGTGACTCTGCTTGCTGGACAGCACAGACTTaGTCTACTTGTTCCCGGAGATCAGGTGGAAGTGCTTCTAAAACA +
Preference number: 1 (lower is better)
Translates to: FFLSPCDSACWTAQT*STCSRRSGGSASKT
Trigger: TGTTTTAGAAGCACTTCCACCTGATCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAGCAAGCAGAGTCACATGGCGACAAAAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CCA 90 bp GTGATTTACCCTGTTGTTGAGCTGTTTGGCTATATTGCTTGGACCTaGCAGAGGATCCTCAGGTCTGCATACAGGATTAAAGCTGAGACC +
Preference number: 1 (lower is better)
Translates to: VIYPVVELFGYIAWT*QRILRSAYRIKAET
Trigger: GGTCTCAGCTTTAATCCTGTATGCAGACCTGAGGATCCTCTGCCAGGTCCAAGCAATATAGCCAAACAGCTCAACAACAGGGTAAATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR TCA 90 bp GCTGGAAGGGCTATTAAATTTATTCCTGCGTCACTGTTCGATTCTTaGGGTTCTGGTATTTGCAACAAGACTGTCCCAACTGGTTGTGGC +
Preference number: 1 (lower is better)
Translates to: AGRAIKFIPASLFDS*GSGICNKTVPTGCG
Trigger: GCCACAACCAGTTGGGACAGTCTTGTTGCAAATACCAGAACCTCAAGAATCGAACAGTGACGCAGGAATAAATTTAATAGCCCTTCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR TCA 90 bp GACTACATCTCAGCCTTGGGCCATCTAACACAGGCCAAGCCAACCTaGAATTGTAGTTATCCATTCTCTGAGCAAGGTCTTCACATCATT +
Preference number: 1 (lower is better)
Translates to: DYISALGHLTQAKPT*NCSYPFSEQGLHII
Trigger: AATGATGTGAAGACCTTGCTCAGAGAATGGATAACTACAATTTCAGGTTGGCTTGGCCTGTGTTAGATGGCCCAAGGCTGAGATGTAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR TCA 90 bp CGAAATACTTCTTTGTGCTCCTCTTCGGTGGATTTCTTAGCTTTCTaGACTTGGAAGACATCACGGACAGAGTATGACCCACTAGGAAAG +
Preference number: 1 (lower is better)
Translates to: RNTSLCSSSVDFLAF*TWKTSRTEYDPLGK
Trigger: CTTTCCTAGTGGGTCATACTCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATCCACCGAAGAGGAGCACAAAGAAGTATTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR TCA 90 bp GCCAAGTTGCCTGGCCTCATAACTACAAGATGCAATTTCAGCCCTTaGCAAAACAGAATCAATTCCATTTGCTTGCGCAGAATCTGGATT +
Preference number: 1 (lower is better)
Translates to: AKLPGLITTRCNFSP*QNRINSICLRRIWI
Trigger: AATCCAGATTCTGCGCAAGCAAATGGAATTGATTCTGTTTTGTCAAGGGCTGAAATTGCATCTTGTAGTTATGAGGCCAGGCAACTTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 90 bp CATACGAACAGCATTTGCAAATTCATCAGGAGTAAGTTTGGTCTCTaGAAGGATTTCGGTAATGTCTACCAGCGCTTCATCACAACTGAC +
Preference number: 1 (lower is better)
Translates to: HTNSICKFIRSKFGL*KDFGNVYQRFITTD
Trigger: GTCAGTTGTGATGAAGCGCTGGTAGACATTACCGAAATCCTTGCAGAGACCAAACTTACTCCTGATGAATTTGCAAATGCTGTTCGTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 90 bp GGCAGCACATTTCGTCTGGTCTTTGATTTCCATACGAACAGCATTTaGAAATTCATCAGGAGTAAGTTTGGTCTCTGCAAGGATTTCGGT +
Preference number: 1 (lower is better)
Translates to: GSTFRLVFDFHTNSI*KFIRSKFGLCKDFG
Trigger: ACCGAAATCCTTGCAGAGACCAAACTTACTCCTGATGAATTTGCAAATGCTGTTCGTATGGAAATCAAAGACCAGACGAAATGTGCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CCA 90 bp CGAGCATTACTATCATGCACTTTGCAAATACCTCACAAGCACTTATaGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATTTATG +
Preference number: 1 (lower is better)
Translates to: RALLSCTLQIPHKHL*HSYQRASGSLVIFM
Trigger: CATAAATATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTAATGCTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CCA 90 bp GTTCGATTCTTGAGGTTCTGGTATTTGCAACAAGACTGTCCCAACTaGTTGTGGCAAAATTCCTGTATTACAGCCATTTACTGGTTCTTT +
Preference number: 1 (lower is better)
Translates to: VRFLRFWYLQQDCPN*LWQNSCITAIYWFF
Trigger: AAAGAACCAGTAAATGGCTGTAATACAGGAATTTTGCCACAACCAGTTGGGACAGTCTTGTTGCAAATACCAGAACCTCAAGAATCGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR TCA 90 bp AGCCACTGGTTTTCCTTTGAGATCTGGTCTATTTCGTATACCCACTaGTACAAAGAAGCAATCCATATCAACATGCATTATACAGCTCTG +
Preference number: 1 (lower is better)
Translates to: SHWFSFEIWSISYTH*YKEAIHINMHYTAL
Trigger: CAGAGCTGTATAATGCATGTTGATATGGATTGCTTCTTTGTATCAGTGGGTATACGAAATAGACCAGATCTCAAAGGAAAACCAGTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CCA 90 bp AGGAGAATATTAGAACCAATTCCAACAGAGGCAGCACATTTCGTCTaGTCTTTGATTTCCATACGAACAGCATTTGCAAATTCATCAGGA +
Preference number: 1 (lower is better)
Translates to: RRILEPIPTEAAHFV*SLISIRTAFANSSG
Trigger: TCCTGATGAATTTGCAAATGCTGTTCGTATGGAAATCAAAGACCAGACGAAATGTGCTGCCTCTGTTGGAATTGGTTCTAATATTCTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 90 bp CTTTTTGAAGGAGAAAGTCAGAGATCTGCATGGATAAAGGAAAACTaGATTTCTACAACTATGTCACTAACAGCTATCAAAGGAATGGGC +
Preference number: 1 (lower is better)
Translates to: LFEGESQRSAWIKEN*ISTTMSLTAIKGMG
Trigger: GCCCATTCCTTTGATAGCTGTTAGTGACATAGTTGTAGAAATGCAGTTTTCCTTTATCCATGCAGATCTCTGACTTTCTCCTTCAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR TCA 90 bp ACTGATACAAAGAAGCAATCCATATCAACATGCATTATACAGCTCTaGTGTCTGGGAGAATTCAATACTGACATATCTCCTGTGTCAGTT +
Preference number: 1 (lower is better)
Translates to: TDTKKQSISTCIIQL*CLGEFNTDISPVSV
Trigger: AACTGACACAGGAGATATGTCAGTATTGAATTCTCCCAGACATCAGAGCTGTATAATGCATGTTGATATGGATTGCTTCTTTGTATCAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CCA 90 bp CAAAGAAGCAATCCATATCAACATGCATTATACAGCTCTGATGTCTaGGAGAATTCAATACTGACATATCTCCTGTGTCAGTTACAACAA +
Preference number: 1 (lower is better)
Translates to: QRSNPYQHALYSSDV*ENSILTYLLCQLQQ
Trigger: TTGTTGTAACTGACACAGGAGATATGTCAGTATTGAATTCTCCCAGACATCAGAGCTGTATAATGCATGTTGATATGGATTGCTTCTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 90 bp TTCAATGTTATGAGTGTAGCTTGCCAATGTTTCATACAATGTTTGTaGGACTTCCTTATATGCATGAAAATCGTATGGAACAGCTTGAAG +
Preference number: 1 (lower is better)
Translates to: FNVMSVACQCFIQCL*DFLICMKIVWNSLK
Trigger: CTTCAAGCTGTTCCATACGATTTTCATGCATATAAGGAAGTCGCACAAACATTGTATGAAACATTGGCAAGCTACACTCATAACATTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR TCA 90 bp CTGGACAGCACAGACTTGCTCTACTTGTTCCCGGAGATCAGGTGGAAGTGCTTCGGAAAGTGGCTTGACTaGACTGATGGGCGACTGGGA +
Preference number: 2 (lower is better)
Translates to: LDSTDLLYLFPEIRWKCFGKWLD*TDGRLG
Trigger: TCCCAGTCGCCCATCAGTTCAGTCAAGCCACTTTCC...GAAGCACTTCCACCTGATCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CCA 90 bp GCGCCAGGACGTAAAGGTGCCCTTCCTGTGCCTCTGTTACTTGTAACAGCCACTTGGCAGTGCTCCCTCTaGGATGCGGAATTCCATTCT +
Preference number: 2 (lower is better)
Translates to: APGRKGALPVPLLLVTATWQCSL*DAEFHS
Trigger: AGAATGGAATTCCGCATCCCAGAGGGAGCACTGCCA...AGTGGCTGTTACAAGTAACAGAGGCACAGGAAGGGCACCTTTACGTCCTGGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR GCA 90 bp GCGCCAGGACGTAAAGGTGCCCTTCCTGTGCCTCTGTTACTTGTAACAGCCACTCTTCCCGGAGAGGTCTaGTCCAGATCCACAAAACTA +
Preference number: 2 (lower is better)
Translates to: APGRKGALPVPLLLVTATLPGEV*SRSTKL
Trigger: TAGTTTTGTGGATCTGGAGCAGACCTCTCCGGGAAG...AGTGGCTGTTACAAGTAACAGAGGCACAGGAAGGGCACCTTTACGTCCTGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CAA 90 bp TCCTCCTCCTGGGAAAAGGCTGGAGAAAGCCTGCTGGCAACACTGTaGACCATGGGCACCAAGCAATCCTGTGTCTTTAAGGCACCATTA +
Preference number: 2 (lower is better)
Translates to: SSSWEKAGESLLATL*TMGTKQSCVFKAPL
Trigger: TAATGGTGCCTTAAAGACACAGGATTGCTTGGTGCCCATGGTCAACAGTGTTGCCAGCAGGCTTTCTCCAGCCTTTTCCCAGGAGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR TCA 90 bp TTTGATCATACGCTGCTTTCAGCTCCCTCTGAAGTTCAGCAGGAAGGGCAGCAAATCCAGCTGGGAAGGTaGCGGGACCTCTATACTCAG +
Preference number: 2 (lower is better)
Translates to: FDHTLLSAPSEVQQEGQQIQLGR*RDLYTQ
Trigger: CTGAGTATAGAGGTCCCGTCACCTTCCCAGCTGGAT...TTGCTGCCCTTCCTGCTGAACTTCAGAGGGAGCTGAAAGCAGCGTATGATCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CAA 90 bp CTGAGCAAGGTCTTCACATCATTGAATTCAACAGCTCCAGCTAGATaGGGTGCTGGAGGTCTCACACAGCCAGCTGGGTCAGACTGCAAA +
Preference number: 2 (lower is better)
Translates to: LSKVFTSLNSTAPAR*GAGGLTQPAGSDCK
Trigger: TTTGCAGTCTGACCCAGCTGGCTGTGTGAGACCTCCAGCACCCAATCTAGCTGGAGCTGTTGAATTCAATGATGTGAAGACCTTGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR TCA 90 bp GTTCCCGGAGATCAGGTGGAAGTGCTTCTAAAACAGACTGATCCAGCTGGGAAGGCAGAGTGCAGTCTCTaGAATCAGTGCTGCTCTTCT +
Preference number: 2 (lower is better)
Translates to: VPGDQVEVLLKQTDPAGKAECSL*NQCCSS
Trigger: AGAAGAGCAGCACTGATTTCAGAGACTGCACTCTGC...CTTCCCAGCTGGATCAGTCTGTTTTAGAAGCACTTCCACCTGATCTCCGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CCA 90 bp CCATGTGACTCTGCTTGCTGGACAGCACAGACTTGCTCTACTTGTTCCCGGAGATTTGGCTATATTGCTTaGACCTGGCAGAGGATCCTC +
Preference number: 2 (lower is better)
Translates to: PCDSACWTAQTCSTCSRRFGYIA*TWQRIL
Trigger: GAGGATCCTCTGCCAGGTCCAAGCAATATAGCCAAA...TCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAGCAAGCAGAGTCACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR GCA 90 bp TCTGTGTGGATTCCGCAAAGCATCTGTGTTTCTGGTGCTTTGCTGCAACTGCTGGTGCTCCCTCTGGGATaGGGAATTCCATTCTGTTTC +
Preference number: 2 (lower is better)
Translates to: SVWIPQSICVSGALLQLLVLPLG*GIPFCF
Trigger: GAAACAGAATGGAATTCCGCATCCCAGAGGGAGCAC...CAGCAGTTGCAGCAAAGCACCAGAAACACAGATGCTTTGCGGAATCCACACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR GCA 90 bp CCCTGGCAGAGTTTTTGCAGGACTGTTAAGCAGCTTGTTATTCAAAGGACTCTGCTGACTGCTGGTGAGTaGTGTTCTCGCCCTGCCTTT +
Preference number: 2 (lower is better)
Translates to: PWQSFCRTVKQLVIQRTLLTAGE*CSRPAF
Trigger: AAAGGCAGGGCGAGAACAGCACTCACCAGCAGTCAG...CAGAGTCCTTTGAATAACAAGCTGCTTAACAGTCCTGCAAAAACTCTGCCAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CCA 90 bp CTGAAGAAGTGCTTTTTGTGCTTGAAGGCCCCTGAACAGTGGAGTGGTGAGCACGGTGTACAGCTGATATaGAATGTAGGAGAGGAGTCG +
Preference number: 2 (lower is better)
Translates to: LKKCFLCLKAPEQWSGEHGVQLI*NVGEES
Trigger: CGACTCCTCTCCTACATTCCATATCAGCTGTACACC...GTGCTCACCACTCCACTGTTCAGGGGCCTTCAAGCACAAAAAGCACTTCTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CCA 90 bp CCATGTGACTCTGCTTGCTGGACAGCACAGACTTGCTCTACTTGTTCCCGGAGAAAGCATCTGTGTTTCTaGTGCTTTGCTGCAACTGCT +
Preference number: 2 (lower is better)
Translates to: PCDSACWTAQTCSTCSRRKHLCF*CFAATA
Trigger: AGCAGTTGCAGCAAAGCACCAGAAACACAGATGCTT...TCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAGCAAGCAGAGTCACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR TCA 90 bp CTGGACAGCACAGACTTGCTCTACTTGTTCCCGGAGATCAGGTGGAAGTGCTTCGATTTCTTAGCTTTCTaGACTTGGAAGACATCACGG +
Preference number: 2 (lower is better)
Translates to: LDSTDLLYLFPEIRWKCFDFLAF*TWKTSR
Trigger: CCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATC...GAAGCACTTCCACCTGATCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CCA 90 bp GCGCCAGGACGTAAAGGTGCCCTTCCTGTGCCTCTGTTACTTGTAACAGCCACTTTCCACAATCCATTCTaGTCGAATTACTTTTTCCCC +
Preference number: 2 (lower is better)
Translates to: APGRKGALPVPLLLVTATFHNPF*SNYFFP
Trigger: GGGGAAAAAGTAATTCGACCAGAATGGATTGTGGAA...AGTGGCTGTTACAAGTAACAGAGGCACAGGAAGGGCACCTTTACGTCCTGGCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CCA 90 bp GTTCCCGGAGATCAGGTGGAAGTGCTTCTAAAACAGACTGATCCAGCTGGGAAGCTTTTCAGTTCGAACTaGTCTATCATCCAAGCCACG +
Preference number: 2 (lower is better)
Translates to: VPGDQVEVLLKQTDPAGKLFSSN*SIIQAT
Trigger: CGTGGCTTGGATGATAGACCAGTTCGAACTGAAAAG...CTTCCCAGCTGGATCAGTCTGTTTTAGAAGCACTTCCACCTGATCTCCGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR TCA 90 bp GTTCCCGGAGATCAGGTGGAAGTGCTTCTAAAACAGACTGATCCAGCTGGGAAGGGGAGAATTCAATACTaGCATATCTCCTGTGTCAGT +
Preference number: 2 (lower is better)
Translates to: VPGDQVEVLLKQTDPAGKGRIQY*HISCVS
Trigger: ACTGACACAGGAGATATGTCAGTATTGAATTCTCCC...CTTCCCAGCTGGATCAGTCTGTTTTAGAAGCACTTCCACCTGATCTCCGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR GCA 90 bp CCCTGGCAGAGTTTTTGCAGGACTGTTAAGCAGCTTGTTATTCAAAGGACTCTGTGGACAGCACAGACTTaGTCTACTTGTTCCCGGAGA +
Preference number: 2 (lower is better)
Translates to: PWQSFCRTVKQLVIQRTLWTAQT*STCSRR
Trigger: TCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCA...CAGAGTCCTTTGAATAACAAGCTGCTTAACAGTCCTGCAAAAACTCTGCCAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CCA 90 bp CAGCCAGCTGGGTCAGACTGCAAACTAGAAAGGCCTGGCACACCTGAAGTAGAAAGATTGGTCACTAGCTaGCCTCTGATAAAATCATCT +
Preference number: 2 (lower is better)
Translates to: QPAGSDCKLERPGTPEVERLVTS*PLIKSS
Trigger: AGATGATTTTATCAGAGGCCAGCTAGTGACCAATCT...TTCTACTTCAGGTGTGCCAGGCCTTTCTAGTTTGCAGTCTGACCCAGCTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR GCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGATACTATCATGCACTTTaGAAATACCTCACAAGCACT +
Preference number: 2 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGYYHAL*KYLTST
Trigger: AGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTA...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
3UTR-3UTR GCA 90 bp TTTGATCATACGCTGCTTTCAGCTCCCTCTGAAGTTCAGCAGGAAGGGCAGCAAGTCAGTTACAACAAGTaGAGACCTGCCTGTTTTCAT +
Preference number: 2 (lower is better)
Translates to: FDHTLLSAPSEVQQEGQQVSYNK*RPACFH
Trigger: ATGAAAACAGGCAGGTCTGCACTTGTTGTAACTGAC...TTGCTGCCCTTCCTGCTGAACTTCAGAGGGAGCTGAAAGCAGCGTATGATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR GCA 90 bp AGGCCAAGCCAACCTGAAATTGTAGTTATCCATTCTCTGAGCAAGGTCTTCACAACTGGTCGGCAGATGTaGAGGAAAAGGTGGCAAGAA +
Preference number: 2 (lower is better)
Translates to: RPSQPEIVVIHSLSKVFTTGRQM*RKRWQE
Trigger: TTCTTGCCACCTTTTCCTGCACATCTGCCGACCAGT...TGTGAAGACCTTGCTCAGAGAATGGATAACTACAATTTCAGGTTGGCTTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CCA 90 bp AGGCCAAGCCAACCTGAAATTGTAGTTATCCATTCTCTGAGCAAGGTCTTCACAGACCTTTCTGCACACTaGACTGCTTGGTGTACAGCT +
Preference number: 2 (lower is better)
Translates to: RPSQPEIVVIHSLSKVFTDLSAH*TAWCTA
Trigger: AGCTGTACACCAAGCAGTCCAGTGTGCAGAAAGGTC...TGTGAAGACCTTGCTCAGAGAATGGATAACTACAATTTCAGGTTGGCTTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR TCA 90 bp CTGCTGCCTTTAGATGAAGTAAAGGATTCTTTGGCACAGATGCGCTGGCTGACTTCACTGTTCGATTCTTaGGGTTCTGGTATTTGCAAC +
Preference number: 2 (lower is better)
Translates to: LLPLDEVKDSLAQMRWLTSLFDS*GSGICN
Trigger: GTTGCAAATACCAGAACCTCAAGAATCGAACAGTGA...AGTCAGCCAGCGCATCTGTGCCAAAGAATCCTTTACTTCATCTAAAGGCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CCA 90 bp GCCACGGCAGAACCTATAAAGCATCTGACCTGTTTTGGGACCAAATTCTTTTTGGCACACTGGACTGCTTaGTGTACAGCTGATATGGAA +
Preference number: 2 (lower is better)
Translates to: ATAEPIKHLTCFGTKFFLAHWTA*CTADME
Trigger: TTCCATATCAGCTGTACACCAAGCAGTCCAGTGTGC...CAAAAAGAATTTGGTCCCAAAACAGGTCAGATGCTTTATAGGTTCTGCCGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CAA 90 bp TGTGGCAAAATTCCTGTATTACAGCCATTTACTGGTTCTTTCTTTTaGTCGCCATGTGACTCTGCTTGCTGGACAGCACAGACTTGCTCT +
Preference number: 2 (lower is better)
Translates to: CGKIPVLQPFTGSFF*SPCDSACWTAQTCS
Trigger: AGAGCAAGTCTGTGCTGTCCAGCAAGCAGAGTCACATGGCGACAAAAAGAAAGAACCAGTAAATGGCTGTAATACAGGAATTTTGCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CAA 90 bp CCTGAAATTGTAGTTATCCATTCTCTGAGCAAGGTCTTCACATCATaGAATTCAACAGCTCCAGCTAGATTGGGTGCTGGAGGTCTCACA +
Preference number: 2 (lower is better)
Translates to: PEIVVIHSLSKVFTS*NSTAPARLGAGGLT
Trigger: TGTGAGACCTCCAGCACCCAATCTAGCTGGAGCTGTTGAATTCAATGATGTGAAGACCTTGCTCAGAGAATGGATAACTACAATTTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR TCA 90 bp TCTGTGTGGATTCCGCAAAGCATCTGTGTTTCTGGTGCTTTGCTGCAACTGCTGCTACTAGCTGCTCTTTaGAAACTAATTACTCCAGAA +
Preference number: 2 (lower is better)
Translates to: SVWIPQSICVSGALLQLLLLAAL*KLITPE
Trigger: TTCTGGAGTAATTAGTTTTCAAAGAGCAGCTAGTAG...CAGCAGTTGCAGCAAAGCACCAGAAACACAGATGCTTTGCGGAATCCACACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR TCA 90 bp AGGCCAAGCCAACCTGAAATTGTAGTTATCCATTCTCTGAGCAAGGTCTTCACAACCATTCCATTTCCCTaGAGACTCAGCCTTGTTAGT +
Preference number: 2 (lower is better)
Translates to: RPSQPEIVVIHSLSKVFTTIPFP*RLSLVS
Trigger: ACTAACAAGGCTGAGTCTTCAGGGAAATGGAATGGT...TGTGAAGACCTTGCTCAGAGAATGGATAACTACAATTTCAGGTTGGCTTGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR GCA 90 bp TTTGATCATACGCTGCTTTCAGCTCCCTCTGAAGTTCAGCAGGAAGGGCAGCAAAGAATCAATTCCATTTaGTTGCGCAGAATCTGGATT +
Preference number: 2 (lower is better)
Translates to: FDHTLLSAPSEVQQEGQQRINSI*LRRIWI
Trigger: AATCCAGATTCTGCGCAAGCAAATGGAATTGATTCT...TTGCTGCCCTTCCTGCTGAACTTCAGAGGGAGCTGAAAGCAGCGTATGATCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR GCA 90 bp AGGCCAAGCCAACCTGAAATTGTAGTTATCCATTCTCTGAGCAAGGTCTTCACATCTTTGATCATACGCTaGTTTCAGCTCCCTCTGAAG +
Preference number: 2 (lower is better)
Translates to: RPSQPEIVVIHSLSKVFTSLIIR*FQLPLK
Trigger: CTTCAGAGGGAGCTGAAAGCAGCGTATGATCAAAGA...TGTGAAGACCTTGCTCAGAGAATGGATAACTACAATTTCAGGTTGGCTTGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR GCA 90 bp CAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATTTATCCCTGGCAGAGTTTTTaGAGGACTGTTAAGCAGCTT +
Preference number: 2 (lower is better)
Translates to: QALMAQLSESIRLSGNIYPWQSF*RTVKQL
Trigger: AAGCTGCTTAACAGTCCTGCAAAAACTCTGCCAGGG...ATAAATATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CCA 90 bp TCTATACTCAGGTTAAGTCTCGACTGCACACTGACAGGAGTATGTAGACCATTCACATTGCCCTTCTACTaGATGAAGTTAAGAGGGCTC +
Preference number: 2 (lower is better)
Translates to: SILRLSLDCTLTGVCRPFTLPFY*MKLRGL
Trigger: GAGCCCTCTTAACTTCATCCAGTAGAAGGGCAATGT...GAATGGTCTACATACTCCTGTCAGTGTGCAGTCGAGACTTAACCTGAGTATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CAA 90 bp ATAAAATTGCAGTCTGAAGGTTTGGATGGCACTGAAGGTGCTGCCTaGCTAAACGTAGATACTGAAGAAGTGCTTTTTGTGCTTGAAGGC +
Preference number: 2 (lower is better)
Translates to: IKLQSEGLDGTEGAA*LNVDTEEVLFVLEG
Trigger: GCCTTCAAGCACAAAAAGCACTTCTTCAGTATCTACGTTTAGCAAGGCAGCACCTTCAGTGCCATCCAAACCTTCAGACTGCAATTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CAA 90 bp TGCCAAGTTGCCTGGCCTCATAACTACAAGATGCAATTTCAGCCCTaGACAAAACAGAATCAATTCCATTTGCTTGCGCAGAATCTGGAT +
Preference number: 2 (lower is better)
Translates to: CQVAWPHNYKMQFQP*TKQNQFHLLAQNLD
Trigger: ATCCAGATTCTGCGCAAGCAAATGGAATTGATTCTGTTTTGTCAAGGGCTGAAATTGCATCTTGTAGTTATGAGGCCAGGCAACTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CCA 90 bp GTCGGCAGATGTGCAGGAAAAGGTGGCAAGAAAGTGCAAGTTCTAGAAGCAGATCCAGAAATTTGGAACTaGAAAATACATTGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: VGRCAGKGGKKVQVLEADPEIWN*KIHCPS
Trigger: AGAAGGGCAATGTATTTTCCAGTTCCAAATTTCTGG...ATCTGCTTCTAGAACTTGCACTTTCTTGCCACCTTTTCCTGCACATCTGCCGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CCA 90 bp TCTTTTCTTTCACTGCTGCCTTTAGATGAAGTAAAGGATTCTTTGGCACAGATGTGTGACTCTGCTTGCTaGACAGCACAGACTTGCTCT +
Preference number: 2 (lower is better)
Translates to: SFLSLLPLDEVKDSLAQMCDSAC*TAQTCS
Trigger: AGAGCAAGTCTGTGCTGTCCAGCAAGCAGAGTCACA...CATCTGTGCCAAAGAATCCTTTACTTCATCTAAAGGCAGCAGTGAAAGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR TCA 90 bp TGCAAAGGTGATAATGAGAAAGAATTAGTTCTGTGTGGATTCCGCAAAGCATCTGGAGTCGTCCAGCTTTaGTGCTTTCCACAATCCATT +
Preference number: 2 (lower is better)
Translates to: CKGDNEKELVLCGFRKASGVVQL*CFPQSI
Trigger: AATGGATTGTGGAAAGCATCAAAGCTGGACGACTCC...AGATGCTTTGCGGAATCCACACAGAACTAATTCTTTCTCATTATCACCTTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR TCA 90 bp GTAGCTTGCCAATGTTTCATACAATGTTTGTGCGACTTCCTTATATGCATGAAAAGTGCTTTTTGTGCTTaGAGGCCCCTGAACAGTGGA +
Preference number: 2 (lower is better)
Translates to: VACQCFIQCLCDFLICMKSAFCA*RPLNSG
Trigger: TCCACTGTTCAGGGGCCTTCAAGCACAAAAAGCACT...TTTCATGCATATAAGGAAGTCGCACAAACATTGTATGAAACATTGGCAAGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR GCA 90 bp TCTATACTCAGGTTAAGTCTCGACTGCACACTGACAGGAGTATGTAGACCATTCCGAGCATTACTATCATaGACTTTGCAAATACCTCAC +
Preference number: 2 (lower is better)
Translates to: SILRLSLDCTLTGVCRPFRALLS*TLQIPH
Trigger: GTGAGGTATTTGCAAAGTGCATGATAGTAATGCTCG...GAATGGTCTACATACTCCTGTCAGTGTGCAGTCGAGACTTAACCTGAGTATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGCCTCACAAGCACTTATaGCACAGCTATCAGAGAGCA +
Preference number: 2 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKPHKHL*HSYQRA
Trigger: TGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
3UTR CAA 90 bp TTGATTTCCATACGAACAGCATTTGCAAATTCATCAGGAGTAAGTTaGGTCTCTGCAAGGATTTCGGTAATGTCTACCAGCGCTTCATCA +
Preference number: 2 (lower is better)
Translates to: LISIRTAFANSSGVS*VSARISVMSTSASS
Trigger: TGATGAAGCGCTGGTAGACATTACCGAAATCCTTGCAGAGACCAAACTTACTCCTGATGAATTTGCAAATGCTGTTCGTATGGAAATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR GCA 90 bp GCCACGGCAGAACCTATAAAGCATCTGACCTGTTTTGGGACCAAATTCTTTTTGTACTATCATGCACTTTaGAAATACCTCACAAGCACT +
Preference number: 2 (lower is better)
Translates to: ATAEPIKHLTCFGTKFFLYYHAL*KYLTST
Trigger: AGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTA...CAAAAAGAATTTGGTCCCAAAACAGGTCAGATGCTTTATAGGTTCTGCCGTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGCCTCACAAGCACTTATaGCACAGCTATCAGAGAGCA +
Preference number: 2 (lower is better)
Translates to: LEVFQPFSIINSSCFLELPHKHL*HSYQRA
Trigger: TGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
3UTR-3UTR CCA 90 bp TCATCTTCTTCATTCCAACTGTTCATGCCATTGACTTTGACTTCATTTTCCGTTTATATTGCTTGGACCTaGCAGAGGATCCTCAGGTCT +
Preference number: 2 (lower is better)
Translates to: SSSSFQLFMPLTLTSFSVYIAWT*QRILRS
Trigger: AGACCTGAGGATCCTCTGCCAGGTCCAAGCAATATA...AACGGAAAATGAAGTCAAAGTCAATGGCATGAACAGTTGGAATGAAGAAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CAA 90 bp TACAAGATGCAATTTCAGCCCTTGACAAAACAGAATCAATTCCATTaGCTTGCGCAGAATCTGGATTCTCCCACAATGATGAATCTGGTA +
Preference number: 2 (lower is better)
Translates to: YKMQFQPLTKQNQFH*LAQNLDSPTMMNLV
Trigger: TACCAGATTCATCATTGTGGGAGAATCCAGATTCTGCGCAAGCAAATGGAATTGATTCTGTTTTGTCAAGGGCTGAAATTGCATCTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR TCA 90 bp CAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATTTATATTTCGTATACCCACTaGTACAAAGAAGCAATCCAT +
Preference number: 2 (lower is better)
Translates to: QALMAQLSESIRLSGNIYISYTH*YKEAIH
Trigger: ATGGATTGCTTCTTTGTATCAGTGGGTATACGAAAT...ATAAATATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR GCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCGAGCATTACTATCATaGACTTTGCAAATACCTCAC +
Preference number: 2 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFRALLS*TLQIPH
Trigger: GTGAGGTATTTGCAAAGTGCATGATAGTAATGCTCG...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
3UTR CAA 90 bp ATATTAGAACCAATTCCAACAGAGGCAGCACATTTCGTCTGGTCTTaGATTTCCATACGAACAGCATTTGCAAATTCATCAGGAGTAAGT +
Preference number: 2 (lower is better)
Translates to: ILEPIPTEAAHFVWS*ISIRTAFANSSGVS
Trigger: ACTTACTCCTGATGAATTTGCAAATGCTGTTCGTATGGAAATCAAAGACCAGACGAAATGTGCTGCCTCTGTTGGAATTGGTTCTAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR GCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGCGAGCATTACTATCATaGACTTTGCAAATACCTCAC +
Preference number: 2 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKRALLS*TLQIPH
Trigger: GTGAGGTATTTGCAAAGTGCATGATAGTAATGCTCG...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
3UTR-3UTR GCA 90 bp TCTCCACAAGTTTTAATTCCCAAAGATGCCAACTTAGATTCCATTGAATGTCCACTGCCCATCTGGTTTTaGTTTTCTAGTTGCCATTCT +
Preference number: 2 (lower is better)
Translates to: SPQVLIPKDANLDSIECPLPIWF*FSSCHS
Trigger: AGAATGGCAACTAGAAAAGCAAAACCAGATGGGCAG...TGGACATTCAATGGAATCTAAGTTGGCATCTTTGGGAATTAAAACTTGTGGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CAA 90 bp GGAAGAAGTAGTAAAGATTTTCTTAACATGCTCCTGTGTTCATGCTaGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGG +
Preference number: 2 (lower is better)
Translates to: GRSSKDFLNMLLCSC*ETRIRWFRSFTLSW
Trigger: CCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCATGAACACAGGAGCATGTTAAGAAAATCTTTACTACTTCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
3UTR CAA 90 bp AGCTTCAATGTTATGAGTGTAGCTTGCCAATGTTTCATACAATGTTaGTGCGACTTCCTTATATGCATGAAAATCGTATGGAACAGCTTG +
Preference number: 2 (lower is better)
Translates to: SFNVMSVACQCFIQC*CDFLICMKIVWNSL
Trigger: CAAGCTGTTCCATACGATTTTCATGCATATAAGGAAGTCGCACAAACATTGTATGAAACATTGGCAAGCTACACTCATAACATTGAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CAA 90 bp GTTTCATTGTATGAAACATGTTTAGCATCGCCTTTCCAATTATTTTaGCATTATCTGTTGCCTGGTCAAGAGTTACAGTCCTGGCAATGT +
Preference number: 2 (lower is better)
Translates to: VSLYETCLASPFQLF*HYLLPGQELQSWQC
Trigger: ACATTGCCAGGACTGTAACTCTTGACCAGGCAACAGATAATGCAAAAATAATTGGAAAGGCGATGCTAAACATGTTTCATACAATGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR GCA 90 bp TCTCCACAAGTTTTAATTCCCAAAGATGCCAACTTAGATTCCATTGAATGTCCAAGTAAGTTTGGTCTCTaGAAGGATTTCGGTAATGTC +
Preference number: 2 (lower is better)
Translates to: SPQVLIPKDANLDSIECPSKFGL*KDFGNV
Trigger: GACATTACCGAAATCCTTGCAGAGACCAAACTTACT...TGGACATTCAATGGAATCTAAGTTGGCATCTTTGGGAATTAAAACTTGTGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR GCA 90 bp TCTCCACAAGTTTTAATTCCCAAAGATGCCAACTTAGATTCCATTGAATGTCCAGATCCGTCTACTAGCTaGTCTTTGAAAACTAATTAC +
Preference number: 2 (lower is better)
Translates to: SPQVLIPKDANLDSIECPDPSTS*SLKTNY
Trigger: GTAATTAGTTTTCAAAGAGCAGCTAGTAGACGGATC...TGGACATTCAATGGAATCTAAGTTGGCATCTTTGGGAATTAAAACTTGTGGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR TCA 72 bp CGGACAGAGTATGACCCACTAGGAAAGTGGCTTGACTaGACTGATGGGCGACTGGGACATGTGGAAGGGTTC +
Preference number: 3 (lower is better)
Translates to: RTEYDPLGKWLD*TDGRLGHVEGF
Trigger: GAACCCTTCCACATGTCCCAGTCGCCCATCAGTTCAGTCAAGCCACTTTCCTAGTGGGTCATACTCTGTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 72 bp TCGCCATGTGACTCTGCTTGCTGGACAGCACAGACTTaGTCTACTTGTTCCCGGAGATCAGGTGGAAGTGCT +
Preference number: 3 (lower is better)
Translates to: SPCDSACWTAQT*STCSRRSGGSA
Trigger: AGCACTTCCACCTGATCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAGCAAGCAGAGTCACATGGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 72 bp GCTGTTCTCGCCCTGCCTTTGTCTTTGATCATACGCTaGTTTCAGCTCCCTCTGAAGTTCAGCAGGAAGGGC +
Preference number: 3 (lower is better)
Translates to: AVLALPLSLIIR*FQLPLKFSRKG
Trigger: GCCCTTCCTGCTGAACTTCAGAGGGAGCTGAAAGCAGCGTATGATCAAAGACAAAGGCAGGGCGAGAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR TCA 72 bp TGGGTCAGACTGCAAACTAGAAAGGCCTGGCACACCTaGAGTAGAAGCAGAGAGTTCTTCCAGGGGTTTCTC +
Preference number: 3 (lower is better)
Translates to: WVRLQTRKAWHT*SRSREFFQGFL
Trigger: GAGAAACCCCTGGAAGAACTCTCTGCTTCTACTTCAGGTGTGCCAGGCCTTTCTAGTTTGCAGTCTGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CCA 72 bp TGGGCGACTGGGACATGTGGAAGGGTTCAGATTAGTTaGAACCAACTGATTCACGTGAATCCCAACCCCTCT +
Preference number: 3 (lower is better)
Translates to: WATGTCGRVQIS*NQLIHVNPNPS
Trigger: AGAGGGGTTGGGATTCACGTGAATCAGTTGGTTCCAACTAATCTGAACCCTTCCACATGTCCCAGTCGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CAA 90 bp TTTGATCATACGCTGCTTTCAGCTCCCTCTGAAGTTCAGCAGGAAGGGCAGCAAAGCTGTTTGGCTATATaGCTTGGACCTGGCAGAGGA +
Preference number: 3 (lower is better)
Translates to: FDHTLLSAPSEVQQEGQQSCLAI*LGPGRG
Trigger: TCCTCTGCCAGGTCCAAGCAATATAGCCAAACAGCT...TTGCTGCCCTTCCTGCTGAACTTCAGAGGGAGCTGAAAGCAGCGTATGATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CAA 90 bp CCCTGGCAGAGTTTTTGCAGGACTGTTAAGCAGCTTGTTATTCAAAGGACTCTGCTGCTGGCAACACTGTaGACCATGGGCACCAAGCAA +
Preference number: 3 (lower is better)
Translates to: PWQSFCRTVKQLVIQRTLLLATL*TMGTKQ
Trigger: TTGCTTGGTGCCCATGGTCAACAGTGTTGCCAGCAG...CAGAGTCCTTTGAATAACAAGCTGCTTAACAGTCCTGCAAAAACTCTGCCAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CAA 90 bp TTTGATCATACGCTGCTTTCAGCTCCCTCTGAAGTTCAGCAGGAAGGGCAGCAAGCCCGAAATACTTCTTaGTGCTCCTCTTCGGTGGAT +
Preference number: 3 (lower is better)
Translates to: FDHTLLSAPSEVQQEGQQARNTS*CSSSVD
Trigger: ATCCACCGAAGAGGAGCACAAAGAAGTATTTCGGGC...TTGCTGCCCTTCCTGCTGAACTTCAGAGGGAGCTGAAAGCAGCGTATGATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 72 bp GGATTCCGCAAAGCATCTGTGTTTCTGGTGCTTTGCTaGAACTGCTGCAGAGTGCAGTCTCTGAAATCAGTG +
Preference number: 3 (lower is better)
Translates to: GFRKASVFLVLC*NCCRVQSLKSV
Trigger: CACTGATTTCAGAGACTGCACTCTGCAGCAGTTGCAGCAAAGCACCAGAAACACAGATGCTTTGCGGAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CCA 72 bp GGTTCTTTCTTTTTGTCGCCATGTGACTCTGCTTGCTaGACAGCACAGACTTGCTCTACTTGTTCCCGGAGA +
Preference number: 3 (lower is better)
Translates to: GSFFLSPCDSAC*TAQTCSTCSRR
Trigger: TCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAGCAAGCAGAGTCACATGGCGACAAAAAGAAAGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CAA 90 bp GTTCCCGGAGATCAGGTGGAAGTGCTTCTAAAACAGACTGATCCAGCTGGGAAGCTGTTGTTGAGCTGTTaGGCTATATTGCTTGGACCT +
Preference number: 3 (lower is better)
Translates to: VPGDQVEVLLKQTDPAGKLLLSC*AILLGP
Trigger: AGGTCCAAGCAATATAGCCAAACAGCTCAACAACAG...CTTCCCAGCTGGATCAGTCTGTTTTAGAAGCACTTCCACCTGATCTCCGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 72 bp AAAGCATCTGTGTTTCTGGTGCTTTGCTGCAACTGCTaGAGAGTGCAGTCTCTGAAATCAGTGCTGCTCTTC +
Preference number: 3 (lower is better)
Translates to: KASVFLVLCCNC*RVQSLKSVLLF
Trigger: GAAGAGCAGCACTGATTTCAGAGACTGCACTCTGCAGCAGTTGCAGCAAAGCACCAGAAACACAGATGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 72 bp CTCAGCCTTGTTAGTATCAGGACTGGTCGGCAGATGTaGAGGAAAAGGTGGCAAGAAAGTGCAAGTTCTAGA +
Preference number: 3 (lower is better)
Translates to: LSLVSIRTGRQM*RKRWQESASSR
Trigger: TCTAGAACTTGCACTTTCTTGCCACCTTTTCCTGCACATCTGCCGACCAGTCCTGATACTAACAAGGCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
3UTR GCA 72 bp GGTGACGGGACCTCTATACTCAGGTTAAGTCTCGACTaGACACTGACAGGAGTATGTAGACCATTCCATTTC +
Preference number: 3 (lower is better)
Translates to: GDGTSILRLSLD*TLTGVCRPFHF
Trigger: GAAATGGAATGGTCTACATACTCCTGTCAGTGTGCAGTCGAGACTTAACCTGAGTATAGAGGTCCCGTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CCA 72 bp TTTCTGCACACTGGACTGCTTGGTGTACAGCTGATATaGAATGTAGGAGAGGAGTCGTCCAGCTTTGATGCT +
Preference number: 3 (lower is better)
Translates to: FLHTGLLGVQLI*NVGEESSSFDA
Trigger: AGCATCAAAGCTGGACGACTCCTCTCCTACATTCCATATCAGCTGTACACCAAGCAGTCCAGTGTGCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CAA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGATTACTATCATGCACTTaGCAAATACCTCACAAGCAC +
Preference number: 3 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGLLSCT*QIPHKH
Trigger: GTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTAA...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
3UTR-3UTR CAA 90 bp CCCTGGCAGAGTTTTTGCAGGACTGTTAAGCAGCTTGTTATTCAAAGGACTCTGGCCCTGCCTTTGTCTTaGATCATACGCTGCTTTCAG +
Preference number: 3 (lower is better)
Translates to: PWQSFCRTVKQLVIQRTLALPLS*IIRCFQ
Trigger: CTGAAAGCAGCGTATGATCAAAGACAAAGGCAGGGC...CAGAGTCCTTTGAATAACAAGCTGCTTAACAGTCCTGCAAAAACTCTGCCAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CAA 90 bp AGGCCAAGCCAACCTGAAATTGTAGTTATCCATTCTCTGAGCAAGGTCTTCACATTGCAGTCTGAAGGTTaGGATGGCACTGAAGGTGCT +
Preference number: 3 (lower is better)
Translates to: RPSQPEIVVIHSLSKVFTLQSEG*DGTEGA
Trigger: AGCACCTTCAGTGCCATCCAAACCTTCAGACTGCAA...TGTGAAGACCTTGCTCAGAGAATGGATAACTACAATTTCAGGTTGGCTTGGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CAA 90 bp CTGGACAGCACAGACTTGCTCTACTTGTTCCCGGAGATCAGGTGGAAGTGCTTCTGTCTTTGTAGGGTATaGACAAACTCAGTCAATTCA +
Preference number: 3 (lower is better)
Translates to: LDSTDLLYLFPEIRWKCFCLCRV*TNSVNS
Trigger: TGAATTGACTGAGTTTGTCAATACCCTACAAAGACA...GAAGCACTTCCACCTGATCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR TCA 72 bp TCAGCCTTGGGCCATCTAACACAGGCCAAGCCAACCTaGAATTGTAGTTATCCATTCTCTGAGCAAGGTCTT +
Preference number: 3 (lower is better)
Translates to: SALGHLTQAKPT*NCSYPFSEQGL
Trigger: AAGACCTTGCTCAGAGAATGGATAACTACAATTTCAGGTTGGCTTGGCCTGTGTTAGATGGCCCAAGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CCA 72 bp ATTTATTCCTGCGTCACTGTTCGATTCTTGAGGTTCTaGTATTTGCAACAAGACTGTCCCAACTGGTTGTGG +
Preference number: 3 (lower is better)
Translates to: IYSCVTVRFLRF*YLQQDCPNWLW
Trigger: CCACAACCAGTTGGGACAGTCTTGTTGCAAATACCAGAACCTCAAGAATCGAACAGTGACGCAGGAATAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR TCA 72 bp CCTGGCCTCATAACTACAAGATGCAATTTCAGCCCTTaGCAAAACAGAATCAATTCCATTTGCTTGCGCAGA +
Preference number: 3 (lower is better)
Translates to: PGLITTRCNFSP*QNRINSICLRR
Trigger: TCTGCGCAAGCAAATGGAATTGATTCTGTTTTGTCAAGGGCTGAAATTGCATCTTGTAGTTATGAGGCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 72 bp AGCATTTGCAAATTCATCAGGAGTAAGTTTGGTCTCTaGAAGGATTTCGGTAATGTCTACCAGCGCTTCATC +
Preference number: 3 (lower is better)
Translates to: SICKFIRSKFGL*KDFGNVYQRFI
Trigger: GATGAAGCGCTGGTAGACATTACCGAAATCCTTGCAGAGACCAAACTTACTCCTGATGAATTTGCAAATGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CAA 90 bp TCTCCACAAGTTTTAATTCCCAAAGATGCCAACTTAGATTCCATTGAATGTCCAGTTTGGCTATATTGCTaGGACCTGGCAGAGGATCCT +
Preference number: 3 (lower is better)
Translates to: SPQVLIPKDANLDSIECPVWLYC*DLAEDP
Trigger: AGGATCCTCTGCCAGGTCCAAGCAATATAGCCAAAC...TGGACATTCAATGGAATCTAAGTTGGCATCTTTGGGAATTAAAACTTGTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CAA 90 bp GTAGCTTGCCAATGTTTCATACAATGTTTGTGCGACTTCCTTATATGCATGAAATGTGTTTCTGGTGCTTaGCTGCAACTGCTGCAGAGT +
Preference number: 3 (lower is better)
Translates to: VACQCFIQCLCDFLICMKCVSGA*LQLLQS
Trigger: ACTCTGCAGCAGTTGCAGCAAAGCACCAGAAACACA...TTTCATGCATATAAGGAAGTCGCACAAACATTGTATGAAACATTGGCAAGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CAA 90 bp CCCTGGCAGAGTTTTTGCAGGACTGTTAAGCAGCTTGTTATTCAAAGGACTCTGATTCTTTTTGGAGTTTaGCCATGGTCATATACTGCA +
Preference number: 3 (lower is better)
Translates to: PWQSFCRTVKQLVIQRTLILFGV*PWSYTA
Trigger: TGCAGTATATGACCATGGCAAAACTCCAAAAAGAAT...CAGAGTCCTTTGAATAACAAGCTGCTTAACAGTCCTGCAAAAACTCTGCCAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR TCA 72 bp CAATTCCAACAGAGGCAGCACATTTCGTCTGGTCTTTaGTTTCCATACGAACAGCATTTGCAAATTCATCAG +
Preference number: 3 (lower is better)
Translates to: QFQQRQHISSGL*FPYEQHLQIHQ
Trigger: CTGATGAATTTGCAAATGCTGTTCGTATGGAAATCAAAGACCAGACGAAATGTGCTGCCTCTGTTGGAATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CCA 72 bp TTCTGGTATTTGCAACAAGACTGTCCCAACTGGTTGTaGCAAAATTCCTGTATTACAGCCATTTACTGGTTC +
Preference number: 3 (lower is better)
Translates to: FWYLQQDCPNWL*QNSCITAIYWF
Trigger: GAACCAGTAAATGGCTGTAATACAGGAATTTTGCCACAACCAGTTGGGACAGTCTTGTTGCAAATACCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CAA 90 bp CAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATTTATTCAAAGGAATGGGCTTaGTTACTTTTCAAAGCAAGT +
Preference number: 3 (lower is better)
Translates to: QALMAQLSESIRLSGNIYSKEWA*LLFKAS
Trigger: ACTTGCTTTGAAAAGTAACAAAGCCCATTCCTTTGA...ATAAATATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR TCA 72 bp GCTATTAAATTTATTCCTGCGTCACTGTTCGATTCTTaGGGTTCTGGTATTTGCAACAAGACTGTCCCAACT +
Preference number: 3 (lower is better)
Translates to: AIKFIPASLFDS*GSGICNKTVPT
Trigger: AGTTGGGACAGTCTTGTTGCAAATACCAGAACCTCAAGAATCGAACAGTGACGCAGGAATAAATTTAATAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 72 bp TTTCGTCTGGTCTTTGATTTCCATACGAACAGCATTTaGAAATTCATCAGGAGTAAGTTTGGTCTCTGCAAG +
Preference number: 3 (lower is better)
Translates to: FRLVFDFHTNSI*KFIRSKFGLCK
Trigger: CTTGCAGAGACCAAACTTACTCCTGATGAATTTGCAAATGCTGTTCGTATGGAAATCAAAGACCAGACGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CCA 72 bp TTAGAACCAATTCCAACAGAGGCAGCACATTTCGTCTaGTCTTTGATTTCCATACGAACAGCATTTGCAAAT +
Preference number: 3 (lower is better)
Translates to: LEPIPTEAAHFV*SLISIRTAFAN
Trigger: ATTTGCAAATGCTGTTCGTATGGAAATCAAAGACCAGACGAAATGTGCTGCCTCTGTTGGAATTGGTTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CCA 72 bp ATTGAATGTCCAACTCCTGGTAGATTGGTCACTAGCTaGCCTCTGATAAAATCATCTACTTCTTCTGGTTTT +
Preference number: 3 (lower is better)
Translates to: IECPTPGRLVTS*PLIKSSTSSGF
Trigger: AAAACCAGAAGAAGTAGATGATTTTATCAGAGGCCAGCTAGTGACCAATCTACCAGGAGTTGGACATTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR TCA 72 bp TGGCTGAGTAAACCTTATTCCATAGTTGATCTCAGCTaGAACAGATTTTCTTTCCTTTTCAGTTCGAACTGG +
Preference number: 3 (lower is better)
Translates to: WLSKPYSIVDLS*NRFSFLFSSNW
Trigger: CCAGTTCGAACTGAAAAGGAAAGAAAATCTGTTTCAGCTGAGATCAACTATGGAATAAGGTTTACTCAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CCA 72 bp AGAAATTTGGAACTGGAAAATACATTGCCCTTCTACTaGATGAAGTTAAGAGGGCTCTTTGAAGTTCACTTC +
Preference number: 3 (lower is better)
Translates to: RNLELENTLPFY*MKLRGLFEVHF
Trigger: GAAGTGAACTTCAAAGAGCCCTCTTAACTTCATCCAGTAGAAGGGCAATGTATTTTCCAGTTCCAAATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CCA 72 bp AATCCATATCAACATGCATTATACAGCTCTGATGTCTaGGAGAATTCAATACTGACATATCTCCTGTGTCAG +
Preference number: 3 (lower is better)
Translates to: NPYQHALYSSDV*ENSILTYLLCQ
Trigger: CTGACACAGGAGATATGTCAGTATTGAATTCTCCCAGACATCAGAGCTGTATAATGCATGTTGATATGGATT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CAA 90 bp TCTCCACAAGTTTTAATTCCCAAAGATGCCAACTTAGATTCCATTGAATGTCCATTACTATCATGCACTTaGCAAATACCTCACAAGCAC +
Preference number: 3 (lower is better)
Translates to: SPQVLIPKDANLDSIECPLLSCT*QIPHKH
Trigger: GTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTAA...TGGACATTCAATGGAATCTAAGTTGGCATCTTTGGGAATTAAAACTTGTGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR-3UTR CAA 90 bp TCTCCACAAGTTTTAATTCCCAAAGATGCCAACTTAGATTCCATTGAATGTCCACAACTGTTCATGCCATaGACTTTGACTTCATTTTCC +
Preference number: 3 (lower is better)
Translates to: SPQVLIPKDANLDSIECPQLFMP*TLTSFS
Trigger: GGAAAATGAAGTCAAAGTCAATGGCATGAACAGTTG...TGGACATTCAATGGAATCTAAGTTGGCATCTTTGGGAATTAAAACTTGTGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR TCA 72 bp AAGAAGCAATCCATATCAACATGCATTATACAGCTCTaGTGTCTGGGAGAATTCAATACTGACATATCTCCT +
Preference number: 3 (lower is better)
Translates to: KKQSISTCIIQL*CLGEFNTDISP
Trigger: AGGAGATATGTCAGTATTGAATTCTCCCAGACATCAGAGCTGTATAATGCATGTTGATATGGATTGCTTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 72 bp AATTATAAAAACTCCGAGCATTACTATCATGCACTTTaGAAATACCTCACAAGCACTTATGGCACAGCTATC +
Preference number: 3 (lower is better)
Translates to: NYKNSEHYYHAL*KYLTSTYGTAI
Trigger: GATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTAATGCTCGGAGTTTTTATAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
3UTR GCA 72 bp ATGAGTGTAGCTTGCCAATGTTTCATACAATGTTTGTaGGACTTCCTTATATGCATGAAAATCGTATGGAAC +
Preference number: 3 (lower is better)
Translates to: MSVACQCFIQCL*DFLICMKIVWN
Trigger: GTTCCATACGATTTTCATGCATATAAGGAAGTCGCACAAACATTGTATGAAACATTGGCAAGCTACACTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 72 bp GGAGAAAGTCAGAGATCTGCATGGATAAAGGAAAACTaGATTTCTACAACTATGTCACTAACAGCTATCAAA +
Preference number: 3 (lower is better)
Translates to: GESQRSAWIKEN*ISTTMSLTAIK
Trigger: TTTGATAGCTGTTAGTGACATAGTTGTAGAAATGCAGTTTTCCTTTATCCATGCAGATCTCTGACTTTCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR GCA 72 bp CAATGTTTCATACAATGTTTGTGCGACTTCCTTATATaGATGAAAATCGTATGGAACAGCTTGAAGATTAGG +
Preference number: 3 (lower is better)
Translates to: QCFIQCLCDFLI*MKIVWNSLKIR
Trigger: CCTAATCTTCAAGCTGTTCCATACGATTTTCATGCATATAAGGAAGTCGCACAAACATTGTATGAAACATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CTGAAGAAGTGCTTTTTGTGCTTGAAGGCCCCTGAACAGTGGAGTGGTGAGCACAGGCAGCCCCACCGCTaGGCAGCGCCGCGGTCCACG +
Preference number: 4 (lower is better)
Translates to: LKKCFLCLKAPEQWSGEHRQPHR*AAPRST
Trigger: CGTGGACCGCGGCGCTGCTCAGCGGTGGGGCTGCCT...GTGCTCACCACTCCACTGTTCAGGGGCCTTCAAGCACAAAAAGCACTTCTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAAGGCAGCCCCACCGCTaGGCAGCGCCGCGGTCCACG +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIRQPHR*AAPRST
Trigger: CGTGGACCGCGGCGCTGCTCAGCGGTGGGGCTGCCT...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR GCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAGAGCTTCTTCCGCGTTaGCCCAGACCACCATGCCCG +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGELLPR*PRPPCP
Trigger: CGGGCATGGTGGTCTGGGGCAACGCGGAAGAAGCTC...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGATACTGCCACTCCAGCTaGGGGTTAGCGCCAGGACGT +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGYCHSS*GLAPGR
Trigger: ACGTCCTGGCGCTAACCCCCAGCTGGAGTGGCAGTA...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCTGGCTGACTGCTGGTaGGTGCTGTTCTCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWLADCW*VLFSPC
Trigger: GCAGGGCGAGAACAGCACTCACCAGCAGTCAGCCAG...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp GTTGTTGAGCTGTTTGGCTATATTGCTTGGACCTGGCAGAGGATCCTCAGGTCTCTGGCTGACTGCTGGTaGGTGCTGTTCTCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: VVELFGYIAWTWQRILRSLADCW*VLFSPC
Trigger: GCAGGGCGAGAACAGCACTCACCAGCAGTCAGCCAG...AGACCTGAGGATCCTCTGCCAGGTCCAAGCAATATAGCCAAACAGCTCAACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGAGGCAGCCCCACCGCTaGGCAGCGCCGCGGTCCACG +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKRQPHR*AAPRST
Trigger: CGTGGACCGCGGCGCTGCTCAGCGGTGGGGCTGCCT...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAGGAAAGTGGCTTGACTaGACTGATGGGCGACTGGGA +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGGKWLD*TDGRLG
Trigger: TCCCAGTCGCCCATCAGTTCAGTCAAGCCACTTTCC...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCTGCCCCAGACCACCATaGCCGGGCCCGGCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFCPRPP*PGPAAF
Trigger: GAAGGCCGCCGGGCCCGGGCATGGTGGTCTGGGGCA...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGACTGACTGCTGGTGAGTaGTGTTCTCGCCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGLTAGE*CSRPAF
Trigger: AAAGGCAGGGCGAGAACAGCACTCACCAGCAGTCAG...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp CAGCCAGCTGGGTCAGACTGCAAACTAGAAAGGCCTGGCACACCTGAAGTAGAACAGCTCCAGCTAGATTaGGTGCTGGAGGTCTCACAC +
Preference number: 4 (lower is better)
Translates to: QPAGSDCKLERPGTPEVEQLQLD*VLEVSH
Trigger: GTGTGAGACCTCCAGCACCCAATCTAGCTGGAGCTG...TTCTACTTCAGGTGTGCCAGGCCTTTCTAGTTTGCAGTCTGACCCAGCTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CCATGTGACTCTGCTTGCTGGACAGCACAGACTTGCTCTACTTGTTCCCGGAGACTCAGGGTCCACCTGTaGAAATGCTGGAAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: PCDSACWTAQTCSTCSRRLRVHL*KCWKGY
Trigger: ATAGCCCTTCCAGCATTTTCACAGGTGGACCCTGAG...TCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAGCAAGCAGAGTCACATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCACAGATGCGCTGGCTaGCTGCTGGTGAGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWHRCAG*LLVSAV
Trigger: AACAGCACTCACCAGCAGTCAGCCAGCGCATCTGTG...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGACCATGTGACTCTGCTTaGTGGACAGCACAGACTTGC +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGPCDSA*WTAQTC
Trigger: GCAAGTCTGTGCTGTCCAGCAAGCAGAGTCACATGG...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGTTAACTTCTGGGGACTaGCACAGGCCCCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWLTSGD*HRPLAE
Trigger: CTCTGCCAGGGGCCTGTGGCAGTCCCCAGAAGTTAA...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGACAGAGCTTAGCAGTCTaGCCTGGAGGTTTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGQSLAV*PGGFSA
Trigger: GGCTGAAAAACCTCCAGGCCAGACTGCTAAGCTCTG...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
3UTR CAA 72 bp CTGCTGGTGAGTGCTGTTCTCGCCCTGCCTTTGTCTTaGATCATACGCTGCTTTCAGCTCCCTCTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LLVSAVLALPLS*IIRCFQLPLKF
Trigger: GAACTTCAGAGGGAGCTGAAAGCAGCGTATGATCAAAGACAAAGGCAGGGCGAGAACAGCACTCACCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAAGTGCTTTTTGTGCTTaGAGGCCCCTGAACAGTGGA +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGSAFCA*RPLNSG
Trigger: TCCACTGTTCAGGGGCCTTCAAGCACAAAAAGCACT...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAATCACGGACAGAGTATaGCCCACTAGGAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGITDRV*PTRKVA
Trigger: AGCCACTTTCCTAGTGGGTCATACTCTGTCCGTGAT...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CTGGACAGCACAGACTTGCTCTACTTGTTCCCGGAGATCAGGTGGAAGTGCTTCGCTTCTAAAACAGACTaGTCCAGCTGGGAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LDSTDLLYLFPEIRWKCFASKTD*SSWEGD
Trigger: GTCACCTTCCCAGCTGGATCAGTCTGTTTTAGAAGC...GAAGCACTTCCACCTGATCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGTGCCCCAGACCACCATaGCCGGGCCCGGCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELCPRPP*PGPAAF
Trigger: GAAGGCCGCCGGGCCCGGGCATGGTGGTCTGGGGCA...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp TCTCCACAAGTTTTAATTCCCAAAGATGCCAACTTAGATTCCATTGAATGTCCATGCCCCAGACCACCATaGCCGGGCCCGGCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SPQVLIPKDANLDSIECPCPRPP*PGPAAF
Trigger: GAAGGCCGCCGGGCCCGGGCATGGTGGTCTGGGGCA...TGGACATTCAATGGAATCTAAGTTGGCATCTTTGGGAATTAAAACTTGTGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGATTTCTGGTGCTTTGCTaGAACTGCTGCAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGFLVLC*NCCRVQ
Trigger: CTGCACTCTGCAGCAGTTGCAGCAAAGCACCAGAAA...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATTAACTTCTGGGGACTaGCACAGGCCCCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVILTSGD*HRPLAE
Trigger: CTCTGCCAGGGGCCTGTGGCAGTCCCCAGAAGTTAA...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCCACCTCGCCTCATGGTaGAGCTTCTTCCGCGTTGCC +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGHLASW*SFFRVA
Trigger: GGCAACGCGGAAGAAGCTCCACCATGAGGCGAGGTG...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGACTGCATAGCAGCATCTaGTCGAAACTGTTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGLHSSI*SKLFLQ
Trigger: TTGGAGGAACAGTTTCGATCAGATGCTGCTATGCAG...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGTGCTGGCAACACTGTTaGCCATGGGCACCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWCWQHC*PWAPSN
Trigger: ATTGCTTGGTGCCCATGGTCAACAGTGTTGCCAGCA...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CTGCTGCCTTTAGATGAAGTAAAGGATTCTTTGGCACAGATGCGCTGGCTGACTGGAAAGTGGCTTGACTaGACTGATGGGCGACTGGGA +
Preference number: 4 (lower is better)
Translates to: LLPLDEVKDSLAQMRWLTGKWLD*TDGRLG
Trigger: TCCCAGTCGCCCATCAGTTCAGTCAAGCCACTTTCC...AGTCAGCCAGCGCATCTGTGCCAAAGAATCCTTTACTTCATCTAAAGGCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp GTTGTTGAGCTGTTTGGCTATATTGCTTGGACCTGGCAGAGGATCCTCAGGTCTCTTTTTGTCGCCATGTaGCTCTGCTTGCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: VVELFGYIAWTWQRILRSLFVAM*LCLLDS
Trigger: GCTGTCCAGCAAGCAGAGTCACATGGCGACAAAAAG...AGACCTGAGGATCCTCTGCCAGGTCCAAGCAATATAGCCAAACAGCTCAACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGCTTTCAGCTCCCTCTaGAGTTCAGCAGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIAFSSL*SSAGRA
Trigger: TGCCCTTCCTGCTGAACTTCAGAGGGAGCTGAAAGC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp CACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGATTTCTTAGCTTTCACAGATGCGCTGGCTaGCTGCTGGTGAGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: HSSPKYFFVLLFGGFLSFHRCAG*LLVSAV
Trigger: AACAGCACTCACCAGCAGTCAGCCAGCGCATCTGTG...AAAGCTAAGAAATCCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp GCGCCAGGACGTAAAGGTGCCCTTCCTGTGCCTCTGTTACTTGTAACAGCCACTGAGGACCAGTCTTTTTaGAGGAGAAAGTCAGAGATC +
Preference number: 4 (lower is better)
Translates to: APGRKGALPVPLLLVTATEDQSF*RRKSEI
Trigger: GATCTCTGACTTTCTCCTTCAAAAAGACTGGTCCTC...AGTGGCTGTTACAAGTAACAGAGGCACAGGAAGGGCACCTTTACGTCCTGGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAGCTGTTTGGCTATATTaGTTGGACCTGGCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGAVWLY*LDLAED
Trigger: ATCCTCTGCCAGGTCCAAGCAATATAGCCAAACAGC...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp GTTCCCGGAGATCAGGTGGAAGTGCTTCTAAAACAGACTGATCCAGCTGGGAAGCTTCCCGGAGAGGTCTaGTCCAGATCCACAAAACTA +
Preference number: 4 (lower is better)
Translates to: VPGDQVEVLLKQTDPAGKLPGEV*SRSTKL
Trigger: TAGTTTTGTGGATCTGGAGCAGACCTCTCCGGGAAG...CTTCCCAGCTGGATCAGTCTGTTTTAGAAGCACTTCCACCTGATCTCCGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGACTTTGCTGCAACTGCTaGAGAGTGCAGTCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGLCCNC*RVQSLK
Trigger: TTTCAGAGACTGCACTCTGCAGCAGTTGCAGCAAAG...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGGTGCTTTGCTGCAACTaGTGCAGAGTGCAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWVLCCN*CRVQSL
Trigger: CAGAGACTGCACTCTGCAGCAGTTGCAGCAAAGCAC...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAACCGATTCCACCGATTaGTGCATCAGCCTTTTCATG +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGTDSTD*CISLFM
Trigger: CATGAAAAGGCTGATGCAGCAATCGGTGGAATCGGT...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CCATGTGACTCTGCTTGCTGGACAGCACAGACTTGCTCTACTTGTTCCCGGAGAACCGATTCCACCGATTaGTGCATCAGCCTTTTCATG +
Preference number: 4 (lower is better)
Translates to: PCDSACWTAQTCSTCSRRTDSTD*CISLFM
Trigger: CATGAAAAGGCTGATGCAGCAATCGGTGGAATCGGT...TCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAGCAAGCAGAGTCACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGGCCTTATCCTCCTCCTaGGAAAAGGCTGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWALSSS*EKAGES
Trigger: GCTTTCTCCAGCCTTTTCCCAGGAGGAGGATAAGGC...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp GGTCGGCAGATGTGCAGGAAAAGGTGGCAAGAAAGTGCAAGTTCTAGAAGCAGAGCCTTATCCTCCTCCTaGGAAAAGGCTGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: GRQMCRKRWQESASSRSRALSSS*EKAGES
Trigger: GCTTTCTCCAGCCTTTTCCCAGGAGGAGGATAAGGC...TCTGCTTCTAGAACTTGCACTTTCTTGCCACCTTTTCCTGCACATCTGCCGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp AAGCAGATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTTACTGCCACTCCAGCTaGGGGTTAGCGCCAGGACGT +
Preference number: 4 (lower is better)
Translates to: KQMIFPDPQQPEILLCAPYCHSS*GLAPGR
Trigger: ACGTCCTGGCGCTAACCCCCAGCTGGAGTGGCAGTA...AGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCATCAATTAACTTCTaGGGACTGCCACAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWPSINF*GLPQAP
Trigger: AGGGGCCTGTGGCAGTCCCCAGAAGTTAATTGATGG...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp GTTCCCGGAGATCAGGTGGAAGTGCTTCTAAAACAGACTGATCCAGCTGGGAAGTCTCACACAGCCAGCTaGGTCAGACTGCAAACTAGA +
Preference number: 4 (lower is better)
Translates to: VPGDQVEVLLKQTDPAGKSHTAS*VRLQTR
Trigger: TCTAGTTTGCAGTCTGACCCAGCTGGCTGTGTGAGA...CTTCCCAGCTGGATCAGTCTGTTTTAGAAGCACTTCCACCTGATCTCCGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGACCTCACAAGCACTTATaGCACAGCTATCAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGPHKHL*HSYQRA
Trigger: TGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
3UTR CAA 72 bp TGGGAAAAGGCTGGAGAAAGCCTGCTGGCAACACTGTaGACCATGGGCACCAAGCAATCCTGTGTCTTTAAG +
Preference number: 4 (lower is better)
Translates to: WEKAGESLLATL*TMGTKQSCVFK
Trigger: CTTAAAGACACAGGATTGCTTGGTGCCCATGGTCAACAGTGTTGCCAGCAGGCTTTCTCCAGCCTTTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGGCAGAGTGCAGTCTCTaGAATCAGTGCTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWAECSL*NQCCSS
Trigger: AGAAGAGCAGCACTGATTTCAGAGACTGCACTCTGC...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGAGGTTTGGATGGCACTaGAGGTGCTGCCTTGCTAAA +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWRFGWH*RCCLAK
Trigger: TTTAGCAAGGCAGCACCTTCAGTGCCATCCAAACCT...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAGCGCTTCATCACAACTaGCAGCTTCAATGTTATGAG +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGALHHN*QLQCYE
Trigger: CTCATAACATTGAAGCTGTCAGTTGTGATGAAGCGC...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAACCATTCCATTTCCCTaGAGACTCAGCCTTGTTAGT +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGTIPFP*RLSLVS
Trigger: ACTAACAAGGCTGAGTCTTCAGGGAAATGGAATGGT...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp GGTCGGCAGATGTGCAGGAAAAGGTGGCAAGAAAGTGCAAGTTCTAGAAGCAGAGTCTCGACTGCACACTaGCAGGAGTATGTAGACCAT +
Preference number: 4 (lower is better)
Translates to: GRQMCRKRWQESASSRSRVSTAH*QEYVDH
Trigger: ATGGTCTACATACTCCTGTCAGTGTGCAGTCGAGAC...TCTGCTTCTAGAACTTGCACTTTCTTGCCACCTTTTCCTGCACATCTGCCGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
CDS-3UTR TCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATACTCAGGGTCCACCTGTaGAAATGCTGGAAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVILRVHL*KCWKGY
Trigger: ATAGCCCTTCCAGCATTTTCACAGGTGGACCCTGAG...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTGGCTGACTGCTGGTaGGTGCTGTTCTCGCCCTGC +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFLADCW*VLFSPC
Trigger: GCAGGGCGAGAACAGCACTCACCAGCAGTCAGCCAG...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAAAGGCCTGGCACACCTaGAGTAGAAGCAGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIKAWHT*SRSREF
Trigger: GAACTCTCTGCTTCTACTTCAGGTGTGCCAGGCCTT...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR GCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGAAGCTGAGACCTTTCTaGACACTGGACTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWKLRPF*TLDCLV
Trigger: CACCAAGCAGTCCAGTGTGCAGAAAGGTCTCAGCTT...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCTTCCCGGAGAGGTCTaGTCCAGATCCACAAAACTA +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWLPGEV*SRSTKL
Trigger: TAGTTTTGTGGATCTGGAGCAGACCTCTCCGGGAAG...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp GCGCCAGGACGTAAAGGTGCCCTTCCTGTGCCTCTGTTACTTGTAACAGCCACTCGAAATACTTCTTTGTaGTCCTCTTCGGTGGATTTC +
Preference number: 4 (lower is better)
Translates to: APGRKGALPVPLLLVTATRNTSL*SSSVDF
Trigger: GAAATCCACCGAAGAGGAGCACAAAGAAGTATTTCG...AGTGGCTGTTACAAGTAACAGAGGCACAGGAAGGGCACCTTTACGTCCTGGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCATCCACCTCGCCTCATaGTGGAGCTTCTTCCGCGTT +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGIHLAS*WSFFRV
Trigger: AACGCGGAAGAAGCTCCACCATGAGGCGAGGTGGAT...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGGACCTTTCTGCACACTaGACTGCTTGGTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWDLSAH*TAWCTA
Trigger: AGCTGTACACCAAGCAGTCCAGTGTGCAGAAAGGTC...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp GTTCCCGGAGATCAGGTGGAAGTGCTTCTAAAACAGACTGATCCAGCTGGGAAGTTTGGCTATATTGCTTaGACCTGGCAGAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: VPGDQVEVLLKQTDPAGKFGYIA*TWQRIL
Trigger: GAGGATCCTCTGCCAGGTCCAAGCAATATAGCCAAA...CTTCCCAGCTGGATCAGTCTGTTTTAGAAGCACTTCCACCTGATCTCCGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATGGCAGTGCTCCCTCTaGGATGCGGAATTCCATTCT +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIWQCSL*DAEFHS
Trigger: AGAATGGAATTCCGCATCCCAGAGGGAGCACTGCCA...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp ATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGTGGCAGTGCTCCCTCTaGGATGCGGAATTCCATTCT +
Preference number: 4 (lower is better)
Translates to: IFPDPQQPEILLCAPLRWWQCSL*DAEFHS
Trigger: AGAATGGAATTCCGCATCCCAGAGGGAGCACTGCCA...CCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGTGTGACTCTGCTTGCTaGACAGCACAGACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWCDSAC*TAQTCS
Trigger: AGAGCAAGTCTGTGCTGTCCAGCAAGCAGAGTCACA...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGACAAGACTGTCCCAACTaGTTGTGGCAAAATTCCTGT +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGQDCPN*LWQNSC
Trigger: ACAGGAATTTTGCCACAACCAGTTGGGACAGTCTTG...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCCAGCTCCAGCTAGATTaGGTGCTGGAGGTCTCACAC +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGQLQLD*VLEVSH
Trigger: GTGTGAGACCTCCAGCACCCAATCTAGCTGGAGCTG...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp GTTCCCGGAGATCAGGTGGAAGTGCTTCTAAAACAGACTGATCCAGCTGGGAAGCCTCACAAGCACTTATaGCACAGCTATCAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: VPGDQVEVLLKQTDPAGKPHKHL*HSYQRA
Trigger: TGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG...CTTCCCAGCTGGATCAGTCTGTTTTAGAAGCACTTCCACCTGATCTCCGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGACTTAGCAGTCTGGCCTaGAGGTTTTTCAGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGLSSLA*RFFSLL
Trigger: TAAAAGGCTGAAAAACCTCCAGGCCAGACTGCTAAG...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTGCTGGCAACACTGTTaGCCATGGGCACCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGCWQHC*PWAPSN
Trigger: ATTGCTTGGTGCCCATGGTCAACAGTGTTGCCAGCA...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGCAGAGTGCAGTCTCTaGAATCAGTGCTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIAECSL*NQCCSS
Trigger: AGAAGAGCAGCACTGATTTCAGAGACTGCACTCTGC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp GCATACAGGATTAAAGCTGAGACCTTTCTGCACACTGGACTGCTTGGTGTACAGAGGTTTGGATGGCACTaGAGGTGCTGCCTTGCTAAA +
Preference number: 4 (lower is better)
Translates to: AYRIKAETFLHTGLLGVQRFGWH*RCCLAK
Trigger: TTTAGCAAGGCAGCACCTTCAGTGCCATCCAAACCT...CTGTACACCAAGCAGTCCAGTGTGCAGAAAGGTCTCAGCTTTAATCCTGTATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAGGGAGAATTCAATACTaGCATATCTCCTGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGGRIQY*HISCVS
Trigger: ACTGACACAGGAGATATGTCAGTATTGAATTCTCCC...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGCTTCTAAAACAGACTaGTCCAGCTGGGAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIASKTD*SSWEGD
Trigger: GTCACCTTCCCAGCTGGATCAGTCTGTTTTAGAAGC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCCTCAGGGTCCACCTGTaGAAATGCTGGAAGGGCTAT +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGLRVHL*KCWKGY
Trigger: ATAGCCCTTCCAGCATTTTCACAGGTGGACCCTGAG...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp CTCTTCGGTGGATTTCTTAGCTTTCTGAACTTGGAAGACATCACGGACAGAGTAGGAAAGTGGCTTGACTaGACTGATGGGCGACCCTCT +
Preference number: 4 (lower is better)
Translates to: LFGGFLSFLNLEDITDRVGKWLD*TDGRPS
Trigger: AGAGGGTCGCCCATCAGTTCAGTCAAGCCACTTTCC...TACTCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATCCACCGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438366.1
CDS-3UTR GCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGGAGCTTCTTCCGCGTTaGCCCAGACCACCATGCCCG +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKELLPR*PRPPCP
Trigger: CGGGCATGGTGGTCTGGGGCAACGCGGAAGAAGCTC...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGGCTGTTTGGCTATATTaGTTGGACCTGGCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWAVWLY*LDLAED
Trigger: ATCCTCTGCCAGGTCCAAGCAATATAGCCAAACAGC...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGTGCTCCCTCTGGGATaGGGAATTCCATTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIVLPLG*GIPFCF
Trigger: GAAACAGAATGGAATTCCGCATCCCAGAGGGAGCAC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR GCA 90 bp GGTCGGCAGATGTGCAGGAAAAGGTGGCAAGAAAGTGCAAGTTCTAGAAGCAGACTTTGCTGCAACTGCTaGAGAGTGCAGTCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: GRQMCRKRWQESASSRSRLCCNC*RVQSLK
Trigger: TTTCAGAGACTGCACTCTGCAGCAGTTGCAGCAAAG...TCTGCTTCTAGAACTTGCACTTTCTTGCCACCTTTTCCTGCACATCTGCCGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp CACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGATTTCTTAGCTTTGTGCTTTGCTGCAACTaGTGCAGAGTGCAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: HSSPKYFFVLLFGGFLSFVLCCN*CRVQSL
Trigger: CAGAGACTGCACTCTGCAGCAGTTGCAGCAAAGCAC...AAAGCTAAGAAATCCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATTTCTGGTGCTTTGCTaGAACTGCTGCAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIFLVLC*NCCRVQ
Trigger: CTGCACTCTGCAGCAGTTGCAGCAAAGCACCAGAAA...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR GCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAGTCAGTTACAACAAGTaGAGACCTGCCTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGVSYNK*RPACFH
Trigger: ATGAAAACAGGCAGGTCTGCACTTGTTGTAACTGAC...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCCTGGCAGAGTTTTTaGAGGACTGTTAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWPWQSF*RTVKQL
Trigger: AAGCTGCTTAACAGTCCTGCAAAAACTCTGCCAGGG...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGGCACACTGGACTGCTTaGTGTACAGCTGATATGGAA +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWAHWTA*CTADME
Trigger: TTCCATATCAGCTGTACACCAAGCAGTCCAGTGTGC...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTGGCAGTGCTCCCTCTaGGATGCGGAATTCCATTCT +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGWQCSL*DAEFHS
Trigger: AGAATGGAATTCCGCATCCCAGAGGGAGCACTGCCA...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAACTTGTAACAGCCACTaGTTTTCCTTTGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGTCNSH*FSFEIW
Trigger: CCAGATCTCAAAGGAAAACCAGTGGCTGTTACAAGT...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCTACTGCCACTCCAGCTaGGGGTTAGCGCCAGGACGT +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFYCHSS*GLAPGR
Trigger: ACGTCCTGGCGCTAACCCCCAGCTGGAGTGGCAGTA...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAAGGGTTCAGATTAGTTaGAACCAACTGATTCACGTG +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGRVQIS*NQLIHV
Trigger: CACGTGAATCAGTTGGTTCCAACTAATCTGAACCCT...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCGAACTGATGGGCGACTaGGACATGTGGAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGELMGD*DMWKGS
Trigger: TGAACCCTTCCACATGTCCCAGTCGCCCATCAGTTC...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp CACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGATTTCTTAGCTTTGAACTGATGGGCGACTaGGACATGTGGAAGGGTTCA +
Preference number: 4 (lower is better)
Translates to: HSSPKYFFVLLFGGFLSFELMGD*DMWKGS
Trigger: TGAACCCTTCCACATGTCCCAGTCGCCCATCAGTTC...AAAGCTAAGAAATCCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCCCATCAATTAACTTCTaGGGACTGCCACAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGPSINF*GLPQAP
Trigger: AGGGGCCTGTGGCAGTCCCCAGAAGTTAATTGATGG...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp CTGCTGCCTTTAGATGAAGTAAAGGATTCTTTGGCACAGATGCGCTGGCTGACTCTGCATAGCAGCATCTaGTCGAAACTGTTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LLPLDEVKDSLAQMRWLTLHSSI*SKLFLQ
Trigger: TTGGAGGAACAGTTTCGATCAGATGCTGCTATGCAG...AGTCAGCCAGCGCATCTGTGCCAAAGAATCCTTTACTTCATCTAAAGGCAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAATTTCGTCTGGTCTTTaGTTTCCATACGAACAGCAT +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGISSGL*FPYEQH
Trigger: ATGCTGTTCGTATGGAAATCAAAGACCAGACGAAAT...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp GATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGATCACGGACAGAGTATaGCCCACTAGGAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: DDISRSTAARNTSLCSSSITDRV*PTRKVA
Trigger: AGCCACTTTCCTAGTGGGTCATACTCTGTCCGTGAT...CGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
CDS-3UTR TCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCGTCTCGACTGCACACTaGCAGGAGTATGTAGACCAT +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGVSTAH*QEYVDH
Trigger: ATGGTCTACATACTCCTGTCAGTGTGCAGTCGAGAC...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp ATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGGTCTCGACTGCACACTaGCAGGAGTATGTAGACCAT +
Preference number: 4 (lower is better)
Translates to: MIFPDPQQPEILLCAPLRVSTAH*QEYVDH
Trigger: ATGGTCTACATACTCCTGTCAGTGTGCAGTCGAGAC...CCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
CDS-3UTR TCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCGCTTCTAAAACAGACTaGTCCAGCTGGGAAGGTGAC +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGASKTD*SSWEGD
Trigger: GTCACCTTCCCAGCTGGATCAGTCTGTTTTAGAAGC...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp GTTCCCGGAGATCAGGTGGAAGTGCTTCTAAAACAGACTGATCCAGCTGGGAAGTATGTTCTCAAATCATaGGACGACTACATCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VPGDQVEVLLKQTDPAGKYVLKS*DDYISA
Trigger: GGCTGAGATGTAGTCGTCTCATGATTTGAGAACATA...CTTCCCAGCTGGATCAGTCTGTTTTAGAAGCACTTCCACCTGATCTCCGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGAAGTCCCATCCTTCTaGATAGCAGCATCTGATCGA +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIEVPSF*IAASDR
Trigger: TCGATCAGATGCTGCTATGCAGAAGGATGGGACTTC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR GCA 90 bp GCATACAGGATTAAAGCTGAGACCTTTCTGCACACTGGACTGCTTGGTGTACAGGAAGTCCCATCCTTCTaGATAGCAGCATCTGATCGA +
Preference number: 4 (lower is better)
Translates to: AYRIKAETFLHTGLLGVQEVPSF*IAASDR
Trigger: TCGATCAGATGCTGCTATGCAGAAGGATGGGACTTC...CTGTACACCAAGCAGTCCAGTGTGCAGAAAGGTCTCAGCTTTAATCCTGTATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp CACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGATTTCTTAGCTTTAAGCTGAGACCTTTCTaGACACTGGACTGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: HSSPKYFFVLLFGGFLSFKLRPF*TLDCLV
Trigger: CACCAAGCAGTCCAGTGTGCAGAAAGGTCTCAGCTT...AAAGCTAAGAAATCCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTTTCTGGTGCTTTGCTaGAACTGCTGCAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGFLVLC*NCCRVQ
Trigger: CTGCACTCTGCAGCAGTTGCAGCAAAGCACCAGAAA...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR GCA 90 bp ATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGGTGTTTCTGGTGCTTTaGTGCAACTGCTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: MIFPDPQQPEILLCAPLRVFLVL*CNCCRV
Trigger: CACTCTGCAGCAGTTGCAGCAAAGCACCAGAAACAC...CCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAAGTAAGTTTGGTCTCTaGAAGGATTTCGGTAATGTC +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGSKFGL*KDFGNV
Trigger: GACATTACCGAAATCCTTGCAGAGACCAAACTTACT...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGATTTCTTAGCTTTACTGGTCGGCAGATGTaGAGGAAAAGGTGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: HSSPKYFFVLLFGGFLSFTGRQM*RKRWQE
Trigger: TTCTTGCCACCTTTTCCTGCACATCTGCCGACCAGT...AAAGCTAAGAAATCCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
CDS-3UTR GCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTGGACAGCACAGACTTaGTCTACTTGTTCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGWTAQT*STCSRR
Trigger: TCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCA...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR GCA 90 bp TCTATACTCAGGTTAAGTCTCGACTGCACACTGACAGGAGTATGTAGACCATTCCCATGTGACTCTGCTTaGTGGACAGCACAGACTTGC +
Preference number: 4 (lower is better)
Translates to: SILRLSLDCTLTGVCRPFPCDSA*WTAQTC
Trigger: GCAAGTCTGTGCTGTCCAGCAAGCAGAGTCACATGG...GAATGGTCTACATACTCCTGTCAGTGTGCAGTCGAGACTTAACCTGAGTATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGTCTTTGATCATACGCTaGTTTCAGCTCCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWSLIIR*FQLPLK
Trigger: CTTCAGAGGGAGCTGAAAGCAGCGTATGATCAAAGA...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAACCGATTCCACCGATTaGTGCATCAGCCTTTTCATG +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVITDSTD*CISLFM
Trigger: CATGAAAAGGCTGATGCAGCAATCGGTGGAATCGGT...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGGTGTACAGCTGATATaGAATGTAGGAGAGGAGTCG +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIGVQLI*NVGEES
Trigger: CGACTCCTCTCCTACATTCCATATCAGCTGTACACC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGCACACTGGACTGCTTaGTGTACAGCTGATATGGAA +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIAHWTA*CTADME
Trigger: TTCCATATCAGCTGTACACCAAGCAGTCCAGTGTGC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATTTGGCTATATTGCTTaGACCTGGCAGAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIFGYIA*TWQRIL
Trigger: GAGGATCCTCTGCCAGGTCCAAGCAATATAGCCAAA...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAAGATTGGTCACTAGCTaGCCTCTGATAAAATCATCT +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGRLVTS*PLIKSS
Trigger: AGATGATTTTATCAGAGGCCAGCTAGTGACCAATCT...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGATGTCCCAACTGGTTGTaGCAAAATTCCTGTATTACA +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGCPNWL*QNSCIT
Trigger: TGTAATACAGGAATTTTGCCACAACCAGTTGGGACA...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAACTAAAAATTGTAGATaGAGTCCCATCCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGTKNCR*SPILLH
Trigger: ATGCAGAAGGATGGGACTTCATCTACAATTTTTAGT...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAATTTCGTATACCCACTaGTACAAAGAAGCAATCCAT +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGISYTH*YKEAIH
Trigger: ATGGATTGCTTCTTTGTATCAGTGGGTATACGAAAT...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGCGCTTCATCACAACTaGCAGCTTCAATGTTATGAG +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIALHHN*QLQCYE
Trigger: CTCATAACATTGAAGCTGTCAGTTGTGATGAAGCGC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp ATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGGCGCTTCATCACAACTaGCAGCTTCAATGTTATGAG +
Preference number: 4 (lower is better)
Translates to: IFPDPQQPEILLCAPLRWALHHN*QLQCYE
Trigger: CTCATAACATTGAAGCTGTCAGTTGTGATGAAGCGC...CCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGAGTTCTAGAAGCAGATaGTATTTCCAGATCCACAGC +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWSSRSR*YFQIHS
Trigger: GCTGTGGATCTGGAAATATCATCTGCTTCTAGAACT...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCATCCAGCTGGGAAGGTaGCGGGACCTCTATACTCAG +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFIQLGR*RDLYTQ
Trigger: CTGAGTATAGAGGTCCCGTCACCTTCCCAGCTGGAT...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGTCACTGTTCGATTCTTaGGGTTCTGGTATTTGCAAC +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWSLFDS*GSGICN
Trigger: GTTGCAAATACCAGAACCTCAAGAATCGAACAGTGA...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGAGGTCTTCACATCATTaGATTCAACAGCTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWRSSHH*IQQLQL
Trigger: TAGCTGGAGCTGTTGAATTCAATGATGTGAAGACCT...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCCTTTGCTGCAACTGCTaGAGAGTGCAGTCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGLCCNC*RVQSLK
Trigger: TTTCAGAGACTGCACTCTGCAGCAGTTGCAGCAAAG...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR GCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGACATACGAACAGCATTTaGAAATTCATCAGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGHTNSI*KFIRSK
Trigger: CTTACTCCTGATGAATTTGCAAATGCTGTTCGTATG...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CTCTTCGGTGGATTTCTTAGCTTTCTGAACTTGGAAGACATCACGGACAGAGTAACTGGTCGGCAGATGTaGAGGAAAAGGTGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: LFGGFLSFLNLEDITDRVTGRQM*RKRWQE
Trigger: TTCTTGCCACCTTTTCCTGCACATCTGCCGACCAGT...TACTCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATCCACCGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
CDS-3UTR GCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAAGGTTAAGTCTCGACTaGACACTGACAGGAGTATGT +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIRLSLD*TLTGVC
Trigger: ACATACTCCTGTCAGTGTGCAGTCGAGACTTAACCT...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR GCA 90 bp GTCGGCAGATGTGCAGGAAAAGGTGGCAAGAAAGTGCAAGTTCTAGAAGCAGATTCTTTGATCATACGCTaGTTTCAGCTCCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: VGRCAGKGGKKVQVLEADSLIIR*FQLPLK
Trigger: CTTCAGAGGGAGCTGAAAGCAGCGTATGATCAAAGA...ATCTGCTTCTAGAACTTGCACTTTCTTGCCACCTTTTCCTGCACATCTGCCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTGACTGCTGGTGAGTaGTGTTCTCGCCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFLTAGE*CSRPAF
Trigger: AAAGGCAGGGCGAGAACAGCACTCACCAGCAGTCAG...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCCCCTGGCAGAGTTTTTaGAGGACTGTTAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGPWQSF*RTVKQL
Trigger: AAGCTGCTTAACAGTCCTGCAAAAACTCTGCCAGGG...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR GCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGGATTCCACCGATTGCTaGATCAGCCTTTTCATGTAT +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWDSTDC*ISLFMY
Trigger: ATACATGAAAAGGCTGATGCAGCAATCGGTGGAATC...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CTGAAGAAGTGCTTTTTGTGCTTGAAGGCCCCTGAACAGTGGAGTGGTGAGCACCGAGCATTACTATCATaGACTTTGCAAATACCTCAC +
Preference number: 4 (lower is better)
Translates to: LKKCFLCLKAPEQWSGEHRALLS*TLQIPH
Trigger: GTGAGGTATTTGCAAAGTGCATGATAGTAATGCTCG...GTGCTCACCACTCCACTGTTCAGGGGCCTTCAAGCACAAAAAGCACTTCTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp AAGCAGATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTGACCTTTCTGCACACTaGACTGCTTGGTGTACAGCT +
Preference number: 4 (lower is better)
Translates to: KQMIFPDPQQPEILLCAPDLSAH*TAWCTA
Trigger: AGCTGTACACCAAGCAGTCCAGTGTGCAGAAAGGTC...AGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATCTGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTATATTGCTTGGACCTaGCAGAGGATCCTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGYIAWT*QRILRS
Trigger: AGACCTGAGGATCCTCTGCCAGGTCCAAGCAATATA...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAAAGCATCTGTGTTTCTaGTGCTTTGCTGCAACTGCT +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIKHLCF*CFAATA
Trigger: AGCAGTTGCAGCAAAGCACCAGAAACACAGATGCTT...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp CTGGACAGCACAGACTTGCTCTACTTGTTCCCGGAGATCAGGTGGAAGTGCTTCTTTTCCTTTGAGATCTaGTCTATTTCGTATACCCAC +
Preference number: 4 (lower is better)
Translates to: LDSTDLLYLFPEIRWKCFFSFEI*SISYTH
Trigger: GTGGGTATACGAAATAGACCAGATCTCAAAGGAAAA...GAAGCACTTCCACCTGATCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp GGTCGGCAGATGTGCAGGAAAAGGTGGCAAGAAAGTGCAAGTTCTAGAAGCAGAAGGGTTCAGATTAGTTaGAACCAACTGATTCACGTG +
Preference number: 4 (lower is better)
Translates to: GRQMCRKRWQESASSRSRRVQIS*NQLIHV
Trigger: CACGTGAATCAGTTGGTTCCAACTAATCTGAACCCT...TCTGCTTCTAGAACTTGCACTTTCTTGCCACCTTTTCCTGCACATCTGCCGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCAGCTCCAGCTAGATTaGGTGCTGGAGGTCTCACAC +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFQLQLD*VLEVSH
Trigger: GTGTGAGACCTCCAGCACCCAATCTAGCTGGAGCTG...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCCCTCACAAGCACTTATaGCACAGCTATCAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGPHKHL*HSYQRA
Trigger: TGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp AGGCCAAGCCAACCTGAAATTGTAGTTATCCATTCTCTGAGCAAGGTCTTCACAGGAGTCGTCCAGCTTTaGTGCTTTCCACAATCCATT +
Preference number: 4 (lower is better)
Translates to: RPSQPEIVVIHSLSKVFTGVVQL*CFPQSI
Trigger: AATGGATTGTGGAAAGCATCAAAGCTGGACGACTCC...TGTGAAGACCTTGCTCAGAGAATGGATAACTACAATTTCAGGTTGGCTTGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATTTATGCAGAGTGCAGTCTCTaGAATCAGTGCTGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: QALMAQLSESIRLSGNIYAECSL*NQCCSS
Trigger: AGAAGAGCAGCACTGATTTCAGAGACTGCACTCTGC...ATAAATATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGGCTAAACGTAGATACTaGAGAAGTGCTTTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWAKRRY*RSAFCA
Trigger: AGCACAAAAAGCACTTCTTCAGTATCTACGTTTAGC...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp TTTGATCATACGCTGCTTTCAGCTCCCTCTGAAGTTCAGCAGGAAGGGCAGCAAGTCTTTGTAGGGTATTaGCAAACTCAGTCAATTCAC +
Preference number: 4 (lower is better)
Translates to: FDHTLLSAPSEVQQEGQQVFVGY*QTQSIH
Trigger: GTGAATTGACTGAGTTTGTCAATACCCTACAAAGAC...TTGCTGCCCTTCCTGCTGAACTTCAGAGGGAGCTGAAAGCAGCGTATGATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGGGAAAGTGGCTTGACTaGACTGATGGGCGACTGGGA +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKGKWLD*TDGRLG
Trigger: TCCCAGTCGCCCATCAGTTCAGTCAAGCCACTTTCC...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGATTTCTTAGCTTTCTaGACTTGGAAGACATCACGG +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIDFLAF*TWKTSR
Trigger: CCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp GCATACAGGATTAAAGCTGAGACCTTTCTGCACACTGGACTGCTTGGTGTACAGAGTTCTAGAAGCAGATaGTATTTCCAGATCCACAGC +
Preference number: 4 (lower is better)
Translates to: AYRIKAETFLHTGLLGVQSSRSR*YFQIHS
Trigger: GCTGTGGATCTGGAAATATCATCTGCTTCTAGAACT...CTGTACACCAAGCAGTCCAGTGTGCAGAAAGGTCTCAGCTTTAATCCTGTATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp ATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGACCATTCCATTTCCCTaGAGACTCAGCCTTGTTAGT +
Preference number: 4 (lower is better)
Translates to: MIFPDPQQPEILLCAPLRTIPFP*RLSLVS
Trigger: ACTAACAAGGCTGAGTCTTCAGGGAAATGGAATGGT...CCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
CDS-3UTR TCA 90 bp TGCAAAGGTGATAATGAGAAAGAATTAGTTCTGTGTGGATTCCGCAAAGCATCTGCTTTCAGCTCCCTCTaGAGTTCAGCAGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: CKGDNEKELVLCGFRKASAFSSL*SSAGRA
Trigger: TGCCCTTCCTGCTGAACTTCAGAGGGAGCTGAAAGC...AGATGCTTTGCGGAATCCACACAGAACTAATTCTTTCTCATTATCACCTTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAAGGTCTTCACATCATTaGATTCAACAGCTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIRSSHH*IQQLQL
Trigger: TAGCTGGAGCTGTTGAATTCAATGATGTGAAGACCT...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp ATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGAGGTCTTCACATCATTaGATTCAACAGCTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: IFPDPQQPEILLCAPLRWRSSHH*IQQLQL
Trigger: TAGCTGGAGCTGTTGAATTCAATGATGTGAAGACCT...CCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp GGTCGGCAGATGTGCAGGAAAAGGTGGCAAGAAAGTGCAAGTTCTAGAAGCAGATTCTTCAGTGTGAAGTaGAGCATGAAAACCAATCTG +
Preference number: 4 (lower is better)
Translates to: GRQMCRKRWQESASSRSRFFSVK*SMKTNL
Trigger: CAGATTGGTTTTCATGCTTCACTTCACACTGAAGAA...TCTGCTTCTAGAACTTGCACTTTCTTGCCACCTTTTCCTGCACATCTGCCGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp CTCTTCGGTGGATTTCTTAGCTTTCTGAACTTGGAAGACATCACGGACAGAGTAGCTGTTTGGCTATATTaGTTGGACCTGGCAGAGGAT +
Preference number: 4 (lower is better)
Translates to: LFGGFLSFLNLEDITDRVAVWLY*LDLAED
Trigger: ATCCTCTGCCAGGTCCAAGCAATATAGCCAAACAGC...TACTCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATCCACCGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGTCAGTTACAACAAGTaGAGACCTGCCTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIVSYNK*RPACFH
Trigger: ATGAAAACAGGCAGGTCTGCACTTGTTGTAACTGAC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR GCA 90 bp CAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATTTATTGGACAGCACAGACTTaGTCTACTTGTTCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: QALMAQLSESIRLSGNIYWTAQT*STCSRR
Trigger: TCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCA...ATAAATATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp TCTTTTCTTTCACTGCTGCCTTTAGATGAAGTAAAGGATTCTTTGGCACAGATGCTGACTGCTGGTGAGTaGTGTTCTCGCCCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: SFLSLLPLDEVKDSLAQMLTAGE*CSRPAF
Trigger: AAAGGCAGGGCGAGAACAGCACTCACCAGCAGTCAG...CATCTGTGCCAAAGAATCCTTTACTTCATCTAAAGGCAGCAGTGAAAGAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGTTAACTTCTGGGGACTaGCACAGGCCCCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELLTSGD*HRPLAE
Trigger: CTCTGCCAGGGGCCTGTGGCAGTCCCCAGAAGTTAA...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGCCAGCTGGGTCAGACTaGAAACTAGAAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKPAGSD*KLERPG
Trigger: GCCAGGCCTTTCTAGTTTGCAGTCTGACCCAGCTGG...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCGAGCATTACTATCATaGACTTTGCAAATACCTCAC +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWRALLS*TLQIPH
Trigger: GTGAGGTATTTGCAAAGTGCATGATAGTAATGCTCG...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGATCCACCTCGCCTCATaGTGGAGCTTCTTCCGCGTT +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKIHLAS*WSFFRV
Trigger: AACGCGGAAGAAGCTCCACCATGAGGCGAGGTGGAT...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGTTCCACAATCCATTCTaGTCGAATTACTTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWFHNPF*SNYFFP
Trigger: GGGGAAAAAGTAATTCGACCAGAATGGATTGTGGAA...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGTACAGCTCTGATGTCTaGGAGAATTCAATACTGACA +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWYSSDV*ENSILT
Trigger: TGTCAGTATTGAATTCTCCCAGACATCAGAGCTGTA...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAACTTGTAACAGCCACTaGTTTTCCTTTGAGATCTGG +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVITCNSH*FSFEIW
Trigger: CCAGATCTCAAAGGAAAACCAGTGGCTGTTACAAGT...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGAGATTGGTCACTAGCTaGCCTCTGATAAAATCATCT +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWRLVTS*PLIKSS
Trigger: AGATGATTTTATCAGAGGCCAGCTAGTGACCAATCT...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp TTTGATCATACGCTGCTTTCAGCTCCCTCTGAAGTTCAGCAGGAAGGGCAGCAAGCATCTGACCTGTTTTaGGACCAAATTCTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: FDHTLLSAPSEVQQEGQQASDLF*DQILFG
Trigger: TCCAAAAAGAATTTGGTCCCAAAACAGGTCAGATGC...TTGCTGCCCTTCCTGCTGAACTTCAGAGGGAGCTGAAAGCAGCGTATGATCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp CACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGATTTCTTAGCTTTCTTTTCAGTTCGAACTaGTCTATCATCCAAGCCACG +
Preference number: 4 (lower is better)
Translates to: HSSPKYFFVLLFGGFLSFLFSSN*SIIQAT
Trigger: CGTGGCTTGGATGATAGACCAGTTCGAACTGAAAAG...AAAGCTAAGAAATCCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAAGGGTTCAGATTAGTTaGAACCAACTGATTCACGTG +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIRVQIS*NQLIHV
Trigger: CACGTGAATCAGTTGGTTCCAACTAATCTGAACCCT...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGATGTTGTAAAACCACCTaGACATTGTCAAGAATAAAG +
Preference number: 4 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGCCKTT*TLSRIK
Trigger: CTTTATTCTTGACAATGTCCAGGTGGTTTTACAACA...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp CTGAAGAAGTGCTTTTTGTGCTTGAAGGCCCCTGAACAGTGGAGTGGTGAGCACCCAGAAATTTGGAACTaGAAAATACATTGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LKKCFLCLKAPEQWSGEHPEIWN*KIHCPS
Trigger: AGAAGGGCAATGTATTTTCCAGTTCCAAATTTCTGG...GTGCTCACCACTCCACTGTTCAGGGGCCTTCAAGCACAAAAAGCACTTCTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CAA 72 bp TCCTGCGTCACTGTTCGATTCTTGAGGTTCTGGTATTaGCAACAAGACTGTCCCAACTGGTTGTGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: SCVTVRFLRFWY*QQDCPNWLWQN
Trigger: ATTTTGCCACAACCAGTTGGGACAGTCTTGTTGCAAATACCAGAACCTCAAGAATCGAACAGTGACGCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp ATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGATCTTCTTAACGATGTaGTTTACCCTGTTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: IFPDPQQPEILLCAPLRWIFLTM*FTLLLS
Trigger: GCTCAACAACAGGGTAAATCACATCGTTAAGAAGAT...CCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGCTAAACGTAGATACTaGAGAAGTGCTTTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIAKRRY*RSAFCA
Trigger: AGCACAAAAAGCACTTCTTCAGTATCTACGTTTAGC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGTCTTTGTAGGGTATTaGCAAACTCAGTCAATTCAC +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIVFVGY*QTQSIH
Trigger: GTGAATTGACTGAGTTTGTCAATACCCTACAAAGAC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATGCATTATACAGCTCTaGTGTCTGGGAGAATTCAAT +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVICIIQL*CLGEFN
Trigger: ATTGAATTCTCCCAGACATCAGAGCTGTATAATGCA...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp CACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGATTTCTTAGCTTTCCACTGGTTTTCCTTTaGGATCTGGTCTATTTCGTA +
Preference number: 4 (lower is better)
Translates to: HSSPKYFFVLLFGGFLSFPLVFL*DLVYFV
Trigger: TACGAAATAGACCAGATCTCAAAGGAAAACCAGTGG...AAAGCTAAGAAATCCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGACTTCCTTATATGCATaGAAATCGTATGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWTSLYA*KSYGTA
Trigger: AGCTGTTCCATACGATTTTCATGCATATAAGGAAGT...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGACCTTATTCCATAGTTaGTCTCAGCTGAAACAGATT +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWTLFHS*SQLKQI
Trigger: AATCTGTTTCAGCTGAGATCAACTATGGAATAAGGT...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp AAGCAGATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTACCATTCCATTTCCCTaGAGACTCAGCCTTGTTAGT +
Preference number: 4 (lower is better)
Translates to: KQMIFPDPQQPEILLCAPTIPFP*RLSLVS
Trigger: ACTAACAAGGCTGAGTCTTCAGGGAAATGGAATGGT...AGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
CDS-3UTR TCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCGTCTCGACTGCACACTaGCAGGAGTATGTAGACCAT +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFVSTAH*QEYVDH
Trigger: ATGGTCTACATACTCCTGTCAGTGTGCAGTCGAGAC...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGATCCAGCTGGGAAGGTaGCGGGACCTCTATACTCAG +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELIQLGR*RDLYTQ
Trigger: CTGAGTATAGAGGTCCCGTCACCTTCCCAGCTGGAT...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGCTTTTTGTCGCCATGTaGCTCTGCTTGCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKLFVAM*LCLLDS
Trigger: GCTGTCCAGCAAGCAGAGTCACATGGCGACAAAAAG...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGTTATTCAAAGGACTCTaGATCCTTTTTGGTGAACCA +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWLFKGL*ILFGEP
Trigger: TGGTTCACCAAAAAGGATTCAGAGTCCTTTGAATAA...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTTCCCGGAGAGGTCTaGTCCAGATCCACAAAACTA +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFLPGEV*SRSTKL
Trigger: TAGTTTTGTGGATCTGGAGCAGACCTCTCCGGGAAG...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGAGAATCAATTCCATTTaGTTGCGCAGAATCTGGATT +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWRINSI*LRRIWI
Trigger: AATCCAGATTCTGCGCAAGCAAATGGAATTGATTCT...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp GTCGGCAGATGTGCAGGAAAAGGTGGCAAGAAAGTGCAAGTTCTAGAAGCAGATAGTAAGTTTGGTCTCTaGAAGGATTTCGGTAATGTC +
Preference number: 4 (lower is better)
Translates to: VGRCAGKGGKKVQVLEADSKFGL*KDFGNV
Trigger: GACATTACCGAAATCCTTGCAGAGACCAAACTTACT...ATCTGCTTCTAGAACTTGCACTTTCTTGCCACCTTTTCCTGCACATCTGCCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp GCAGATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTCTGCCCATCTGGTTTTaGTTTTCTAGTTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: ADDISRSTAARNTSLCSSLPIWF*FSSCHS
Trigger: AGAATGGCAACTAGAAAAGCAAAACCAGATGGGCAG...AGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGCCATGGTCATATACTaGAAGTCTCCACAAGTTTTA +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIAMVIY*KSPQVL
Trigger: TAAAACTTGTGGAGACTTGCAGTATATGACCATGGC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR GCA 90 bp AAGCAGATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTAGGTTAAGTCTCGACTaGACACTGACAGGAGTATGT +
Preference number: 4 (lower is better)
Translates to: KQMIFPDPQQPEILLCAPRLSLD*TLTGVC
Trigger: ACATACTCCTGTCAGTGTGCAGTCGAGACTTAACCT...AGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATCTGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
CDS-3UTR GCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGCCAGCTGGGTCAGACTaGAAACTAGAAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELPAGSD*KLERPG
Trigger: GCCAGGCCTTTCTAGTTTGCAGTCTGACCCAGCTGG...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp GTAGCTTGCCAATGTTTCATACAATGTTTGTGCGACTTCCTTATATGCATGAAACCAGCTGGGTCAGACTaGAAACTAGAAAGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VACQCFIQCLCDFLICMKPAGSD*KLERPG
Trigger: GCCAGGCCTTTCTAGTTTGCAGTCTGACCCAGCTGG...TTTCATGCATATAAGGAAGTCGCACAAACATTGTATGAAACATTGGCAAGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp TTCAATGTTATGAGTGTAGCTTGCCAATGTTTCATACAATGTTTGTGCGACTTCATCCACCTCGCCTCATaGTGGAGCTTCTTCCGCGTT +
Preference number: 4 (lower is better)
Translates to: FNVMSVACQCFIQCLCDFIHLAS*WSFFRV
Trigger: AACGCGGAAGAAGCTCCACCATGAGGCGAGGTGGAT...GAAGTCGCACAAACATTGTATGAAACATTGGCAAGCTACACTCATAACATTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp CAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATTTATGCACACTGGACTGCTTaGTGTACAGCTGATATGGAA +
Preference number: 4 (lower is better)
Translates to: QALMAQLSESIRLSGNIYAHWTA*CTADME
Trigger: TTCCATATCAGCTGTACACCAAGCAGTCCAGTGTGC...ATAAATATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGGCCTTATCCTCCTCCTaGGAAAAGGCTGGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKALSSS*EKAGES
Trigger: GCTTTCTCCAGCCTTTTCCCAGGAGGAGGATAAGGC...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATACAGCTCTGATGTCTaGGAGAATTCAATACTGACA +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIYSSDV*ENSILT
Trigger: TGTCAGTATTGAATTCTCCCAGACATCAGAGCTGTA...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCGCAGCACATTTCGTCTaGTCTTTGATTTCCATACGA +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGAAHFV*SLISIR
Trigger: TCGTATGGAAATCAAAGACCAGACGAAATGTGCTGC...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTTCTGGTTTTAGGTaGTACTGCCCATCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGSSGFR*YCPSGF
Trigger: AAAACCAGATGGGCAGTACCACCTAAAACCAGAAGA...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp TTTGATCATACGCTGCTTTCAGCTCCCTCTGAAGTTCAGCAGGAAGGGCAGCAACAAGAGTTACAGTCCTaGCAATGTTATCACAAATTC +
Preference number: 4 (lower is better)
Translates to: FDHTLLSAPSEVQQEGQQQELQS*QCYHKF
Trigger: GAATTTGTGATAACATTGCCAGGACTGTAACTCTTG...TTGCTGCCCTTCCTGCTGAACTTCAGAGGGAGCTGAAAGCAGCGTATGATCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp GGTCGGCAGATGTGCAGGAAAAGGTGGCAAGAAAGTGCAAGTTCTAGAAGCAGACAAGAGTTACAGTCCTaGCAATGTTATCACAAATTC +
Preference number: 4 (lower is better)
Translates to: GRQMCRKRWQESASSRSRQELQS*QCYHKF
Trigger: GAATTTGTGATAACATTGCCAGGACTGTAACTCTTG...TCTGCTTCTAGAACTTGCACTTTCTTGCCACCTTTTCCTGCACATCTGCCGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
CDS-3UTR CCA 90 bp TCTATACTCAGGTTAAGTCTCGACTGCACACTGACAGGAGTATGTAGACCATTCCAAGACTGTCCCAACTaGTTGTGGCAAAATTCCTGT +
Preference number: 4 (lower is better)
Translates to: SILRLSLDCTLTGVCRPFQDCPN*LWQNSC
Trigger: ACAGGAATTTTGCCACAACCAGTTGGGACAGTCTTG...GAATGGTCTACATACTCCTGTCAGTGTGCAGTCGAGACTTAACCTGAGTATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp GCATACAGGATTAAAGCTGAGACCTTTCTGCACACTGGACTGCTTGGTGTACAGCGATTCTTGAGGTTCTaGTATTTGCAACAAGACTGT +
Preference number: 4 (lower is better)
Translates to: AYRIKAETFLHTGLLGVQRFLRF*YLQQDC
Trigger: ACAGTCTTGTTGCAAATACCAGAACCTCAAGAATCG...CTGTACACCAAGCAGTCCAGTGTGCAGAAAGGTCTCAGCTTTAATCCTGTATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCTCTCACACAGCCAGCTaGGTCAGACTGCAAACTAGA +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFSHTAS*VRLQTR
Trigger: TCTAGTTTGCAGTCTGACCCAGCTGGCTGTGTGAGA...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGCAGAGCTTAGCAGTCTaGCCTGGAGGTTTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKQSLAV*PGGFSA
Trigger: GGCTGAAAAACCTCCAGGCCAGACTGCTAAGCTCTG...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
3UTR CAA 72 bp ATTCCTGTATTACAGCCATTTACTGGTTCTTTCTTTTaGTCGCCATGTGACTCTGCTTGCTGGACAGCACAG +
Preference number: 4 (lower is better)
Translates to: IPVLQPFTGSFF*SPCDSACWTAQ
Trigger: CTGTGCTGTCCAGCAAGCAGAGTCACATGGCGACAAAAAGAAAGAACCAGTAAATGGCTGTAATACAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCGGAGTCGTCCAGCTTTaGTGCTTTCCACAATCCATT +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFGVVQL*CFPQSI
Trigger: AATGGATTGTGGAAAGCATCAAAGCTGGACGACTCC...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp TCATCTTCTTCATTCCAACTGTTCATGCCATTGACTTTGACTTCATTTTCCGTTTGCTGGCAACACTGTTaGCCATGGGCACCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: SSSSFQLFMPLTLTSFSVCWQHC*PWAPSN
Trigger: ATTGCTTGGTGCCCATGGTCAACAGTGTTGCCAGCA...AACGGAAAATGAAGTCAAAGTCAATGGCATGAACAGTTGGAATGAAGAAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGAGTGCTTTTTGTGCTTaGAGGCCCCTGAACAGTGGA +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKSAFCA*RPLNSG
Trigger: TCCACTGTTCAGGGGCCTTCAAGCACAAAAAGCACT...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp TCTTTTCTTTCACTGCTGCCTTTAGATGAAGTAAAGGATTCTTTGGCACAGATGAGTGCTTTTTGTGCTTaGAGGCCCCTGAACAGTGGA +
Preference number: 4 (lower is better)
Translates to: SFLSLLPLDEVKDSLAQMSAFCA*RPLNSG
Trigger: TCCACTGTTCAGGGGCCTTCAAGCACAAAAAGCACT...CATCTGTGCCAAAGAATCCTTTACTTCATCTAAAGGCAGCAGTGAAAGAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCGCTAAACGTAGATACTaGAGAAGTGCTTTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGAKRRY*RSAFCA
Trigger: AGCACAAAAAGCACTTCTTCAGTATCTACGTTTAGC...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp GCAGATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTGCATTATACAGCTCTaGTGTCTGGGAGAATTCAAT +
Preference number: 4 (lower is better)
Translates to: ADDISRSTAARNTSLCSSCIIQL*CLGEFN
Trigger: ATTGAATTCTCCCAGACATCAGAGCTGTATAATGCA...AGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAATTTCGTATACCCACTaGTACAAAGAAGCAATCCAT +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIISYTH*YKEAIH
Trigger: ATGGATTGCTTCTTTGTATCAGTGGGTATACGAAAT...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp ATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGCAATTTCAGCCCTTaGCAAAACAGAATCAATTCC +
Preference number: 4 (lower is better)
Translates to: MIFPDPQQPEILLCAPLRCNFSP*QNRINS
Trigger: GGAATTGATTCTGTTTTGTCAAGGGCTGAAATTGCA...CCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAACCTTATTCCATAGTTaGTCTCAGCTGAAACAGATT +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVITLFHS*SQLKQI
Trigger: AATCTGTTTCAGCTGAGATCAACTATGGAATAAGGT...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR TCA 90 bp TGCAAAGGTGATAATGAGAAAGAATTAGTTCTGTGTGGATTCCGCAAAGCATCTATCACGGACAGAGTATaGCCCACTAGGAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: CKGDNEKELVLCGFRKASITDRV*PTRKVA
Trigger: AGCCACTTTCCTAGTGGGTCATACTCTGTCCGTGAT...AGATGCTTTGCGGAATCCACACAGAACTAATTCTTTCTCATTATCACCTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CTCTTCGGTGGATTTCTTAGCTTTCTGAACTTGGAAGACATCACGGACAGAGTAGATTTCTTAGCTTTCTaGACTTGGAAGACATCACGG +
Preference number: 4 (lower is better)
Translates to: LFGGFLSFLNLEDITDRVDFLAF*TWKTSR
Trigger: CCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATC...TACTCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATCCACCGAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
CDS-3UTR TCA 90 bp AAGCAGATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTAGTTCTAGAAGCAGATaGTATTTCCAGATCCACAGC +
Preference number: 4 (lower is better)
Translates to: KQMIFPDPQQPEILLCAPSSRSR*YFQIHS
Trigger: GCTGTGGATCTGGAAATATCATCTGCTTCTAGAACT...AGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATCTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
CDS-3UTR TCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGCTTTTTGTCGCCATGTaGCTCTGCTTGCTGGACAGC +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELLFVAM*LCLLDS
Trigger: GCTGTCCAGCAAGCAGAGTCACATGGCGACAAAAAG...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp AAGCAGATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTACTGCTGCCTTTAGATaGAGTAAAGGATTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: KQMIFPDPQQPEILLCAPTAAFR*SKGFFG
Trigger: GCCAAAGAATCCTTTACTTCATCTAAAGGCAGCAGT...AGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATCTGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp TCATCTTCTTCATTCCAACTGTTCATGCCATTGACTTTGACTTCATTTTCCGTTAAGGCCTGGCACACCTaGAGTAGAAGCAGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: SSSSFQLFMPLTLTSFSVKAWHT*SRSREF
Trigger: GAACTCTCTGCTTCTACTTCAGGTGTGCCAGGCCTT...AACGGAAAATGAAGTCAAAGTCAATGGCATGAACAGTTGGAATGAAGAAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCGGGAAAAACTTCAAATaGGGACCAGTCTTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGGKNFK*GPVFLK
Trigger: CTTCAAAAAGACTGGTCCTCATTTGAAGTTTTTCCC...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGGTGCTCCCTCTGGGATaGGGAATTCCATTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKVLPLG*GIPFCF
Trigger: GAAACAGAATGGAATTCCGCATCCCAGAGGGAGCAC...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGGTGTTTCTGGTGCTTTaGTGCAACTGCTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKVFLVL*CNCCRV
Trigger: CACTCTGCAGCAGTTGCAGCAAAGCACCAGAAACAC...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp GCCACGGCAGAACCTATAAAGCATCTGACCTGTTTTGGGACCAAATTCTTTTTGGTCAGTTACAACAAGTaGAGACCTGCCTGTTTTCAT +
Preference number: 4 (lower is better)
Translates to: ATAEPIKHLTCFGTKFFLVSYNK*RPACFH
Trigger: ATGAAAACAGGCAGGTCTGCACTTGTTGTAACTGAC...CAAAAAGAATTTGGTCCCAAAACAGGTCAGATGCTTTATAGGTTCTGCCGTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATGCGACTTCCTTATATaGATGAAAATCGTATGGAAC +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVICDFLI*MKIVWN
Trigger: GTTCCATACGATTTTCATGCATATAAGGAAGTCGCA...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR GCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATACATACGAACAGCATTTaGAAATTCATCAGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIHTNSI*KFIRSK
Trigger: CTTACTCCTGATGAATTTGCAAATGCTGTTCGTATG...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR GCA 90 bp CCCTGGCAGAGTTTTTGCAGGACTGTTAAGCAGCTTGTTATTCAAAGGACTCTGGCCATGGTCATATACTaGAAGTCTCCACAAGTTTTA +
Preference number: 4 (lower is better)
Translates to: PWQSFCRTVKQLVIQRTLAMVIY*KSPQVL
Trigger: TAAAACTTGTGGAGACTTGCAGTATATGACCATGGC...CAGAGTCCTTTGAATAACAAGCTGCTTAACAGTCCTGCAAAAACTCTGCCAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATTTTGCATTATCTGTTaGCTGGTCAAGAGTTACAGT +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIFCIIC*LVKSYS
Trigger: ACTGTAACTCTTGACCAGGCAACAGATAATGCAAAA...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR GCA 90 bp CTGCTGCCTTTAGATGAAGTAAAGGATTCTTTGGCACAGATGCGCTGGCTGACTTTTTGCATTATCTGTTaGCTGGTCAAGAGTTACAGT +
Preference number: 4 (lower is better)
Translates to: LLPLDEVKDSLAQMRWLTFCIIC*LVKSYS
Trigger: ACTGTAACTCTTGACCAGGCAACAGATAATGCAAAA...AGTCAGCCAGCGCATCTGTGCCAAAGAATCCTTTACTTCATCTAAAGGCAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp GTCGGCAGATGTGCAGGAAAAGGTGGCAAGAAAGTGCAAGTTCTAGAAGCAGATTTTTGCATTATCTGTTaGCTGGTCAAGAGTTACAGT +
Preference number: 4 (lower is better)
Translates to: VGRCAGKGGKKVQVLEADFCIIC*LVKSYS
Trigger: ACTGTAACTCTTGACCAGGCAACAGATAATGCAAAA...ATCTGCTTCTAGAACTTGCACTTTCTTGCCACCTTTTCCTGCACATCTGCCGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
CDS-3UTR GCA 90 bp CTCTTCGGTGGATTTCTTAGCTTTCTGAACTTGGAAGACATCACGGACAGAGTACGAAATACTTCTTTGTaGTCCTCTTCGGTGGATTTC +
Preference number: 4 (lower is better)
Translates to: LFGGFLSFLNLEDITDRVRNTSL*SSSVDF
Trigger: GAAATCCACCGAAGAGGAGCACAAAGAAGTATTTCG...TACTCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATCCACCGAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
CDS-3UTR GCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGACTGGTCGGCAGATGTaGAGGAAAAGGTGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKTGRQM*RKRWQE
Trigger: TTCTTGCCACCTTTTCCTGCACATCTGCCGACCAGT...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CTCTTCGGTGGATTTCTTAGCTTTCTGAACTTGGAAGACATCACGGACAGAGTAGATTCCACCGATTGCTaGATCAGCCTTTTCATGTAT +
Preference number: 4 (lower is better)
Translates to: LFGGFLSFLNLEDITDRVDSTDC*ISLFMY
Trigger: ATACATGAAAAGGCTGATGCAGCAATCGGTGGAATC...TACTCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATCCACCGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp CAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATTTATAAGCATCTGTGTTTCTaGTGCTTTGCTGCAACTGCT +
Preference number: 4 (lower is better)
Translates to: QALMAQLSESIRLSGNIYKHLCF*CFAATA
Trigger: AGCAGTTGCAGCAAAGCACCAGAAACACAGATGCTT...ATAAATATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCAGAATTAGTTCTGTGTaGATTCCGCAAAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGRISSV*IPQSIC
Trigger: ACAGATGCTTTGCGGAATCCACACAGAACTAATTCT...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp GATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGAGAATTAGTTCTGTGTaGATTCCGCAAAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: DDISRSTAARNTSLCSSSRISSV*IPQSIC
Trigger: ACAGATGCTTTGCGGAATCCACACAGAACTAATTCT...CGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATTTTCCTTTGAGATCTaGTCTATTTCGTATACCCAC +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIFSFEI*SISYTH
Trigger: GTGGGTATACGAAATAGACCAGATCTCAAAGGAAAA...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATGCATGAAAATCGTATaGAACAGCTTGAAGATTAGG +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVICMKIV*NSLKIR
Trigger: CCTAATCTTCAAGCTGTTCCATACGATTTTCATGCA...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp GATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGAGATTGGTCACTAGCTaGCCTCTGATAAAATCATCT +
Preference number: 4 (lower is better)
Translates to: DDISRSTAARNTSLCSSSRLVTS*PLIKSS
Trigger: AGATGATTTTATCAGAGGCCAGCTAGTGACCAATCT...CGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTTTGGAGTTTTGCCATaGTCATATACTGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGFGVLP*SYTASL
Trigger: GAGACTTGCAGTATATGACCATGGCAAAACTCCAAA...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGTGTGACTCTGCTTGCTaGACAGCACAGACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKCDSAC*TAQTCS
Trigger: AGAGCAAGTCTGTGCTGTCCAGCAAGCAGAGTCACA...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTGTCCCAACTGGTTGTaGCAAAATTCCTGTATTACA +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGCPNWL*QNSCIT
Trigger: TGTAATACAGGAATTTTGCCACAACCAGTTGGGACA...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGTGTTGTAAAACCACCTaGACATTGTCAAGAATAAAG +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWCCKTT*TLSRIK
Trigger: CTTTATTCTTGACAATGTCCAGGTGGTTTTACAACA...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGATCAAAGTTTCTCAATaGCCAGTAGAAGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: QVESRSETSQEFQSLAVWIKVSQ*PVEAKR
Trigger: TCTTTTTGCTTCTACTGGCCATTGAGAAACTTTGAT...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
3UTR CAA 72 bp AGGTTCTGGTATTTGCAACAAGACTGTCCCAACTGGTaGTGGCAAAATTCCTGTATTACAGCCATTTACTGG +
Preference number: 4 (lower is better)
Translates to: RFWYLQQDCPNW*WQNSCITAIYW
Trigger: CCAGTAAATGGCTGTAATACAGGAATTTTGCCACAACCAGTTGGGACAGTCTTGTTGCAAATACCAGAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CCCTGGCAGAGTTTTTGCAGGACTGTTAAGCAGCTTGTTATTCAAAGGACTCTGACTAAAAATTGTAGATaGAGTCCCATCCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: PWQSFCRTVKQLVIQRTLTKNCR*SPILLH
Trigger: ATGCAGAAGGATGGGACTTCATCTACAATTTTTAGT...CAGAGTCCTTTGAATAACAAGCTGCTTAACAGTCCTGCAAAAACTCTGCCAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGATTTCTTAGCTTTACTTCCTTATATGCATaGAAATCGTATGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: HSSPKYFFVLLFGGFLSFTSLYA*KSYGTA
Trigger: AGCTGTTCCATACGATTTTCATGCATATAAGGAAGT...AAAGCTAAGAAATCCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp GCCACGGCAGAACCTATAAAGCATCTGACCTGTTTTGGGACCAAATTCTTTTTGATTTCGTCTGGTCTTTaGTTTCCATACGAACAGCAT +
Preference number: 4 (lower is better)
Translates to: ATAEPIKHLTCFGTKFFLISSGL*FPYEQH
Trigger: ATGCTGTTCGTATGGAAATCAAAGACCAGACGAAAT...CAAAAAGAATTTGGTCCCAAAACAGGTCAGATGCTTTATAGGTTCTGCCGTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGATCACGGACAGAGTATaGCCCACTAGGAAAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELITDRV*PTRKVA
Trigger: AGCCACTTTCCTAGTGGGTCATACTCTGTCCGTGAT...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCACCATTCCATTTCCCTaGAGACTCAGCCTTGTTAGT +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFTIPFP*RLSLVS
Trigger: ACTAACAAGGCTGAGTCTTCAGGGAAATGGAATGGT...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CCCTGGCAGAGTTTTTGCAGGACTGTTAAGCAGCTTGTTATTCAAAGGACTCTGTTATTCAAAGGACTCTaGATCCTTTTTGGTGAACCA +
Preference number: 4 (lower is better)
Translates to: PWQSFCRTVKQLVIQRTLLFKGL*ILFGEP
Trigger: TGGTTCACCAAAAAGGATTCAGAGTCCTTTGAATAA...CAGAGTCCTTTGAATAACAAGCTGCTTAACAGTCCTGCAAAAACTCTGCCAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCAGACAACACCACCTCTaGTCTACGGGACATAATGTT +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFRQHHL*STGHNV
Trigger: AACATTATGTCCCGTAGATCAGAGGTGGTGTTGTCT...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp GTAGCTTGCCAATGTTTCATACAATGTTTGTGCGACTTCCTTATATGCATGAAAGTGCTCCCTCTGGGATaGGGAATTCCATTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: VACQCFIQCLCDFLICMKVLPLG*GIPFCF
Trigger: GAAACAGAATGGAATTCCGCATCCCAGAGGGAGCAC...TTTCATGCATATAAGGAAGTCGCACAAACATTGTATGAAACATTGGCAAGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGGTGTTTCTGGTGCTTTaGTGCAACTGCTGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELVFLVL*CNCCRV
Trigger: CACTCTGCAGCAGTTGCAGCAAAGCACCAGAAACAC...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp GATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGCATACGAACAGCATTTaGAAATTCATCAGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: DDISRSTAARNTSLCSSSHTNSI*KFIRSK
Trigger: CTTACTCCTGATGAATTTGCAAATGCTGTTCGTATG...CGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATACTTTCCAATTATTTTTaGATTATCTGTTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PHKHLWHSYQRASGSLVILSNYF*IICCLV
Trigger: GACCAGGCAACAGATAATGCAAAAATAATTGGAAAG...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR GCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGACTGGTCGGCAGATGTaGAGGAAAAGGTGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELTGRQM*RKRWQE
Trigger: TTCTTGCCACCTTTTCCTGCACATCTGCCGACCAGT...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCAGGTTAAGTCTCGACTaGACACTGACAGGAGTATGT +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFRLSLD*TLTGVC
Trigger: ACATACTCCTGTCAGTGTGCAGTCGAGACTTAACCT...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp TGCAAAGGTGATAATGAGAAAGAATTAGTTCTGTGTGGATTCCGCAAAGCATCTCCCTGGCAGAGTTTTTaGAGGACTGTTAAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: CKGDNEKELVLCGFRKASPWQSF*RTVKQL
Trigger: AAGCTGCTTAACAGTCCTGCAAAAACTCTGCCAGGG...AGATGCTTTGCGGAATCCACACAGAACTAATTCTTTCTCATTATCACCTTTGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp GATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGATCCGTCTACTAGCTaGTCTTTGAAAACTAATTAC +
Preference number: 4 (lower is better)
Translates to: DDISRSTAARNTSLCSSSDPSTS*SLKTNY
Trigger: GTAATTAGTTTTCAAAGAGCAGCTAGTAGACGGATC...CGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp AGGCCAAGCCAACCTGAAATTGTAGTTATCCATTCTCTGAGCAAGGTCTTCACAAGATTTGGGGGTAGCTaGTTTAAGCTTATCAGAGTT +
Preference number: 4 (lower is better)
Translates to: RPSQPEIVVIHSLSKVFTRFGGS*FKLIRV
Trigger: AACTCTGATAAGCTTAAAGCAGCTACCCCCAAATCT...TGTGAAGACCTTGCTCAGAGAATGGATAACTACAATTTCAGGTTGGCTTGGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGGGTGTACAGCTGATATaGAATGTAGGAGAGGAGTCG +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKGVQLI*NVGEES
Trigger: CGACTCCTCTCCTACATTCCATATCAGCTGTACACC...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTGCATGAAAATCGTATaGAACAGCTTGAAGATTAGG +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGCMKIV*NSLKIR
Trigger: CCTAATCTTCAAGCTGTTCCATACGATTTTCATGCA...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp CAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATTTATGCAGCACATTTCGTCTaGTCTTTGATTTCCATACGA +
Preference number: 4 (lower is better)
Translates to: QALMAQLSESIRLSGNIYAAHFV*SLISIR
Trigger: TCGTATGGAAATCAAAGACCAGACGAAATGTGCTGC...ATAAATATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCCAAGAGTTACAGTCCTaGCAATGTTATCACAAATTC +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGQELQS*QCYHKF
Trigger: GAATTTGTGATAACATTGCCAGGACTGTAACTCTTG...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CCA 90 bp TTCAATGTTATGAGTGTAGCTTGCCAATGTTTCATACAATGTTTGTGCGACTTCTGTGACTCTGCTTGCTaGACAGCACAGACTTGCTCT +
Preference number: 4 (lower is better)
Translates to: FNVMSVACQCFIQCLCDFCDSAC*TAQTCS
Trigger: AGAGCAAGTCTGTGCTGTCCAGCAAGCAGAGTCACA...GAAGTCGCACAAACATTGTATGAAACATTGGCAAGCTACACTCATAACATTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp CTCTTCGGTGGATTTCTTAGCTTTCTGAACTTGGAAGACATCACGGACAGAGTATGTCCCAACTGGTTGTaGCAAAATTCCTGTATTACA +
Preference number: 4 (lower is better)
Translates to: LFGGFLSFLNLEDITDRVCPNWL*QNSCIT
Trigger: TGTAATACAGGAATTTTGCCACAACCAGTTGGGACA...TACTCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATCCACCGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGTCTCACACAGCCAGCTaGGTCAGACTGCAAACTAGA +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELSHTAS*VRLQTR
Trigger: TCTAGTTTGCAGTCTGACCCAGCTGGCTGTGTGAGA...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
3UTR CAA 72 bp CAATTTCAGCCCTTGACAAAACAGAATCAATTCCATTaGCTTGCGCAGAATCTGGATTCTCCCACAATGATG +
Preference number: 4 (lower is better)
Translates to: QFQPLTKQNQFH*LAQNLDSPTMM
Trigger: CATCATTGTGGGAGAATCCAGATTCTGCGCAAGCAAATGGAATTGATTCTGTTTTGTCAAGGGCTGAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CAA 72 bp ATACGAACAGCATTTGCAAATTCATCAGGAGTAAGTTaGGTCTCTGCAAGGATTTCGGTAATGTCTACCAGC +
Preference number: 4 (lower is better)
Translates to: IRTAFANSSGVS*VSARISVMSTS
Trigger: GCTGGTAGACATTACCGAAATCCTTGCAGAGACCAAACTTACTCCTGATGAATTTGCAAATGCTGTTCGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CAA 72 bp CCAATTCCAACAGAGGCAGCACATTTCGTCTGGTCTTaGATTTCCATACGAACAGCATTTGCAAATTCATCA +
Preference number: 4 (lower is better)
Translates to: PIPTEAAHFVWS*ISIRTAFANSS
Trigger: TGATGAATTTGCAAATGCTGTTCGTATGGAAATCAAAGACCAGACGAAATGTGCTGCCTCTGTTGGAATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGGGAGTCGTCCAGCTTTaGTGCTTTCCACAATCCATT +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELGVVQL*CFPQSI
Trigger: AATGGATTGTGGAAAGCATCAAAGCTGGACGACTCC...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCGGGAGAATTCAATACTaGCATATCTCCTGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFGRIQY*HISCVS
Trigger: ACTGACACAGGAGATATGTCAGTATTGAATTCTCCC...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCCACTGGTTTTCCTTTaGGATCTGGTCTATTTCGTA +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFPLVFL*DLVYFV
Trigger: TACGAAATAGACCAGATCTCAAAGGAAAACCAGTGG...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCACTGCTGCCTTTAGATaGAGTAAAGGATTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFTAAFR*SKGFFG
Trigger: GCCAAAGAATCCTTTACTTCATCTAAAGGCAGCAGT...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CTCTTCGGTGGATTTCTTAGCTTTCTGAACTTGGAAGACATCACGGACAGAGTACTACTAGCTGCTCTTTaGAAACTAATTACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LFGGFLSFLNLEDITDRVLLAAL*KLITPE
Trigger: TTCTGGAGTAATTAGTTTTCAAAGAGCAGCTAGTAG...TACTCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATCCACCGAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGGAAGTCCCATCCTTCTaGATAGCAGCATCTGATCGA +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELEVPSF*IAASDR
Trigger: TCGATCAGATGCTGCTATGCAGAAGGATGGGACTTC...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp AAGCAGATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTAGAATCAATTCCATTTaGTTGCGCAGAATCTGGATT +
Preference number: 4 (lower is better)
Translates to: KQMIFPDPQQPEILLCAPRINSI*LRRIWI
Trigger: AATCCAGATTCTGCGCAAGCAAATGGAATTGATTCT...AGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATCTGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp GCCACGGCAGAACCTATAAAGCATCTGACCTGTTTTGGGACCAAATTCTTTTTGTGCGACTTCCTTATATaGATGAAAATCGTATGGAAC +
Preference number: 4 (lower is better)
Translates to: ATAEPIKHLTCFGTKFFLCDFLI*MKIVWN
Trigger: GTTCCATACGATTTTCATGCATATAAGGAAGTCGCA...CAAAAAGAATTTGGTCCCAAAACAGGTCAGATGCTTTATAGGTTCTGCCGTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp GATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGCTTTCCAATTATTTTTaGATTATCTGTTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: DDISRSTAARNTSLCSSSLSNYF*IICCLV
Trigger: GACCAGGCAACAGATAATGCAAAAATAATTGGAAAG...CGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
CDS-3UTR GCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGAGGTTAAGTCTCGACTaGACACTGACAGGAGTATGT +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKRLSLD*TLTGVC
Trigger: ACATACTCCTGTCAGTGTGCAGTCGAGACTTAACCT...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGTCTTTGATCATACGCTaGTTTCAGCTCCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKSLIIR*FQLPLK
Trigger: CTTCAGAGGGAGCTGAAAGCAGCGTATGATCAAAGA...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGTATATTGCTTGGACCTaGCAGAGGATCCTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELYIAWT*QRILRS
Trigger: AGACCTGAGGATCCTCTGCCAGGTCCAAGCAATATA...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGTTTGGCTATATTGCTTaGACCTGGCAGAGGATCCTC +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELFGYIA*TWQRIL
Trigger: GAGGATCCTCTGCCAGGTCCAAGCAATATAGCCAAA...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGAAGCATCTGTGTTTCTaGTGCTTTGCTGCAACTGCT +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKKHLCF*CFAATA
Trigger: AGCAGTTGCAGCAAAGCACCAGAAACACAGATGCTT...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCGCAGCACATTTCGTCTaGTCTTTGATTTCCATACGA +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFAAHFV*SLISIR
Trigger: TCGTATGGAAATCAAAGACCAGACGAAATGTGCTGC...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGCTTTTCAGTTCGAACTaGTCTATCATCCAAGCCACG +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKLFSSN*SIIQAT
Trigger: CGTGGCTTGGATGATAGACCAGTTCGAACTGAAAAG...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGCAAGACTGTCCCAACTaGTTGTGGCAAAATTCCTGT +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKQDCPN*LWQNSC
Trigger: ACAGGAATTTTGCCACAACCAGTTGGGACAGTCTTG...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp ATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGTTGTAAAACCACCTaGACATTGTCAAGAATAAAG +
Preference number: 4 (lower is better)
Translates to: MIFPDPQQPEILLCAPLRCCKTT*TLSRIK
Trigger: CTTTATTCTTGACAATGTCCAGGTGGTTTTACAACA...CCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCATCAAAGTTTCTCAATaGCCAGTAGAAGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGIKVSQ*PVEAKR
Trigger: TCTTTTTGCTTCTACTGGCCATTGAGAAACTTTGAT...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp TGCAAAGGTGATAATGAGAAAGAATTAGTTCTGTGTGGATTCCGCAAAGCATCTACATTGCCCTTCTACTaGATGAAGTTAAGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: CKGDNEKELVLCGFRKASTLPFY*MKLRGL
Trigger: GAGCCCTCTTAACTTCATCCAGTAGAAGGGCAATGT...AGATGCTTTGCGGAATCCACACAGAACTAATTCTTTCTCATTATCACCTTTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGCCACTGGTTTTCCTTTaGGATCTGGTCTATTTCGTA +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKPLVFL*DLVYFV
Trigger: TACGAAATAGACCAGATCTCAAAGGAAAACCAGTGG...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGGATTTCTTAGCTTTCTaGACTTGGAAGACATCACGG +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKDFLAF*TWKTSR
Trigger: CCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATC...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp TGCAAAGGTGATAATGAGAAAGAATTAGTTCTGTGTGGATTCCGCAAAGCATCTTCACTGTTCGATTCTTaGGGTTCTGGTATTTGCAAC +
Preference number: 4 (lower is better)
Translates to: CKGDNEKELVLCGFRKASSLFDS*GSGICN
Trigger: GTTGCAAATACCAGAACCTCAAGAATCGAACAGTGA...AGATGCTTTGCGGAATCCACACAGAACTAATTCTTTCTCATTATCACCTTTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGACTGCTGCCTTTAGATaGAGTAAAGGATTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKTAAFR*SKGFFG
Trigger: GCCAAAGAATCCTTTACTTCATCTAAAGGCAGCAGT...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CTCTTCGGTGGATTTCTTAGCTTTCTGAACTTGGAAGACATCACGGACAGAGTAGTTATGAGTGTAGCTTaGCAATGTTTCATACAATGT +
Preference number: 4 (lower is better)
Translates to: LFGGFLSFLNLEDITDRVVMSVA*QCFIQC
Trigger: ACATTGTATGAAACATTGGCAAGCTACACTCATAAC...TACTCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATCCACCGAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCAGTAAGTTTGGTCTCTaGAAGGATTTCGGTAATGTC +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFSKFGL*KDFGNV
Trigger: GACATTACCGAAATCCTTGCAGAGACCAAACTTACT...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGCTGCCCATCTGGTTTTaGTTTTCTAGTTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKLPIWF*FSSCHS
Trigger: AGAATGGCAACTAGAAAAGCAAAACCAGATGGGCAG...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGCGAAATACTTCTTTGTaGTCCTCTTCGGTGGATTTC +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKRNTSL*SSSVDF
Trigger: GAAATCCACCGAAGAGGAGCACAAAGAAGTATTTCG...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGTCTTCTGGTTTTAGGTaGTACTGCCCATCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKSSGFR*YCPSGF
Trigger: AAAACCAGATGGGCAGTACCACCTAAAACCAGAAGA...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGCTTTTCAGTTCGAACTaGTCTATCATCCAAGCCACG +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELLFSSN*SIIQAT
Trigger: CGTGGCTTGGATGATAGACCAGTTCGAACTGAAAAG...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCGATTCTTGAGGTTCTaGTATTTGCAACAAGACTGT +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFRFLRF*YLQQDC
Trigger: ACAGTCTTGTTGCAAATACCAGAACCTCAAGAATCG...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGCTTAGCAGTCTGGCCTaGAGGTTTTTCAGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELLSSLA*RFFSLL
Trigger: TAAAAGGCTGAAAAACCTCCAGGCCAGACTGCTAAG...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp CTCTTCGGTGGATTTCTTAGCTTTCTGAACTTGGAAGACATCACGGACAGAGTACAGCTATCAAAGGAATaGGCTTTGTTACTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LFGGFLSFLNLEDITDRVQLSKE*ALLLFK
Trigger: TTTGAAAAGTAACAAAGCCCATTCCTTTGATAGCTG...TACTCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATCCACCGAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CAA 72 bp TCTGACCTGTTTTGGGACCAAATTCTTTTTGGAGTTTaGCCATGGTCATATACTGCAAGTCTCCACAAGTTT +
Preference number: 4 (lower is better)
Translates to: SDLFWDQILFGV*PWSYTASLHKF
Trigger: AAACTTGTGGAGACTTGCAGTATATGACCATGGCAAAACTCCAAAAAGAATTTGGTCCCAAAACAGGTCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCACTAAAAATTGTAGATaGAGTCCCATCCTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFTKNCR*SPILLH
Trigger: ATGCAGAAGGATGGGACTTCATCTACAATTTTTAGT...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGATCTTCTTAACGATGTaGTTTACCCTGTTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKIFLTM*FTLLLS
Trigger: GCTCAACAACAGGGTAAATCACATCGTTAAGAAGAT...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp GTAGCTTGCCAATGTTTCATACAATGTTTGTGCGACTTCCTTATATGCATGAAAGGGAGAATTCAATACTaGCATATCTCCTGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: VACQCFIQCLCDFLICMKGRIQY*HISCVS
Trigger: ACTGACACAGGAGATATGTCAGTATTGAATTCTCCC...TTTCATGCATATAAGGAAGTCGCACAAACATTGTATGAAACATTGGCAAGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCATTTCGTATACCCACTaGTACAAAGAAGCAATCCAT +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFISYTH*YKEAIH
Trigger: ATGGATTGCTTCTTTGTATCAGTGGGTATACGAAAT...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp GTAGCTTGCCAATGTTTCATACAATGTTTGTGCGACTTCCTTATATGCATGAAAGATTTCTTAGCTTTCTaGACTTGGAAGACATCACGG +
Preference number: 4 (lower is better)
Translates to: VACQCFIQCLCDFLICMKDFLAF*TWKTSR
Trigger: CCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATC...TTTCATGCATATAAGGAAGTCGCACAAACATTGTATGAAACATTGGCAAGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR TCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGAGTTCTAGAAGCAGATaGTATTTCCAGATCCACAGC +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELSSRSR*YFQIHS
Trigger: GCTGTGGATCTGGAAATATCATCTGCTTCTAGAACT...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGTCACTGTTCGATTCTTaGGGTTCTGGTATTTGCAAC +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELSLFDS*GSGICN
Trigger: GTTGCAAATACCAGAACCTCAAGAATCGAACAGTGA...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCTTATTCAAAGGACTCTaGATCCTTTTTGGTGAACCA +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFLFKGL*ILFGEP
Trigger: TGGTTCACCAAAAAGGATTCAGAGTCCTTTGAATAA...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCAGAATCAATTCCATTTaGTTGCGCAGAATCTGGATT +
Preference number: 4 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFRINSI*LRRIWI
Trigger: AATCCAGATTCTGCGCAAGCAAATGGAATTGATTCT...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGCTGCCCATCTGGTTTTaGTTTTCTAGTTGCCATTCT +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELLPIWF*FSSCHS
Trigger: AGAATGGCAACTAGAAAAGCAAAACCAGATGGGCAG...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGGATTCCACCGATTGCTaGATCAGCCTTTTCATGTAT +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELDSTDC*ISLFMY
Trigger: ATACATGAAAAGGCTGATGCAGCAATCGGTGGAATC...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGAGAATTAGTTCTGTGTaGATTCCGCAAAGCATCTGT +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKRISSV*IPQSIC
Trigger: ACAGATGCTTTGCGGAATCCACACAGAACTAATTCT...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGGCATCTGACCTGTTTTaGGACCAAATTCTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKASDLF*DQILFG
Trigger: TCCAAAAAGAATTTGGTCCCAAAACAGGTCAGATGC...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGCGATTCTTGAGGTTCTaGTATTTGCAACAAGACTGT +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKRFLRF*YLQQDC
Trigger: ACAGTCTTGTTGCAAATACCAGAACCTCAAGAATCG...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGGTCTTTGTAGGGTATTaGCAAACTCAGTCAATTCAC +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELVFVGY*QTQSIH
Trigger: GTGAATTGACTGAGTTTGTCAATACCCTACAAAGAC...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR TCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGTGCAATTTCAGCCCTTaGCAAAACAGAATCAATTCC +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELCNFSP*QNRINS
Trigger: GGAATTGATTCTGTTTTGTCAAGGGCTGAAATTGCA...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGGCCATGGTCATATACTaGAAGTCTCCACAAGTTTTA +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELAMVIY*KSPQVL
Trigger: TAAAACTTGTGGAGACTTGCAGTATATGACCATGGC...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGTACTATCATGCACTTTaGAAATACCTCACAAGCACT +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKYYHAL*KYLTST
Trigger: AGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTA...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp TCTCCACAAGTTTTAATTCCCAAAGATGCCAACTTAGATTCCATTGAATGTCCATACAGCTCTGATGTCTaGGAGAATTCAATACTGACA +
Preference number: 4 (lower is better)
Translates to: SPQVLIPKDANLDSIECPYSSDV*ENSILT
Trigger: TGTCAGTATTGAATTCTCCCAGACATCAGAGCTGTA...TGGACATTCAATGGAATCTAAGTTGGCATCTTTGGGAATTAAAACTTGTGGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGTTTGGAGTTTTGCCATaGTCATATACTGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELFGVLP*SYTASL
Trigger: GAGACTTGCAGTATATGACCATGGCAAAACTCCAAA...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CCA 90 bp TTCAATGTTATGAGTGTAGCTTGCCAATGTTTCATACAATGTTTGTGCGACTTCTTTGGAGTTTTGCCATaGTCATATACTGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: FNVMSVACQCFIQCLCDFFGVLP*SYTASL
Trigger: GAGACTTGCAGTATATGACCATGGCAAAACTCCAAA...GAAGTCGCACAAACATTGTATGAAACATTGGCAAGCTACACTCATAACATTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
3UTR CAA 72 bp GTTATGAGTGTAGCTTGCCAATGTTTCATACAATGTTaGTGCGACTTCCTTATATGCATGAAAATCGTATGG +
Preference number: 4 (lower is better)
Translates to: VMSVACQCFIQC*CDFLICMKIVW
Trigger: CCATACGATTTTCATGCATATAAGGAAGTCGCACAAACATTGTATGAAACATTGGCAAGCTACACTCATAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR GCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGTGCGACTTCCTTATATaGATGAAAATCGTATGGAAC +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELCDFLI*MKIVWN
Trigger: GTTCCATACGATTTTCATGCATATAAGGAAGTCGCA...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGGTTATGAGTGTAGCTTaGCAATGTTTCATACAATGT +
Preference number: 4 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKVMSVA*QCFIQC
Trigger: ACATTGTATGAAACATTGGCAAGCTACACTCATAAC...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp TCTCCACAAGTTTTAATTCCCAAAGATGCCAACTTAGATTCCATTGAATGTCCATACTATCATGCACTTTaGAAATACCTCACAAGCACT +
Preference number: 4 (lower is better)
Translates to: SPQVLIPKDANLDSIECPYYHAL*KYLTST
Trigger: AGTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTA...TGGACATTCAATGGAATCTAAGTTGGCATCTTTGGGAATTAAAACTTGTGGAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp TCATCTTCTTCATTCCAACTGTTCATGCCATTGACTTTGACTTCATTTTCCGTTTGCATGAAAATCGTATaGAACAGCTTGAAGATTAGG +
Preference number: 4 (lower is better)
Translates to: SSSSFQLFMPLTLTSFSVCMKIV*NSLKIR
Trigger: CCTAATCTTCAAGCTGTTCCATACGATTTTCATGCA...AACGGAAAATGAAGTCAAAGTCAATGGCATGAACAGTTGGAATGAAGAAGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGCAAGAGTTACAGTCCTaGCAATGTTATCACAAATTC +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELQELQS*QCYHKF
Trigger: GAATTTGTGATAACATTGCCAGGACTGTAACTCTTG...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGGTTATGAGTGTAGCTTaGCAATGTTTCATACAATGT +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELVMSVA*QCFIQC
Trigger: ACATTGTATGAAACATTGGCAAGCTACACTCATAAC...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR GCA 90 bp TCATCTTCTTCATTCCAACTGTTCATGCCATTGACTTTGACTTCATTTTCCGTTCTTTCCAATTATTTTTaGATTATCTGTTGCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SSSSFQLFMPLTLTSFSVLSNYF*IICCLV
Trigger: GACCAGGCAACAGATAATGCAAAAATAATTGGAAAG...AACGGAAAATGAAGTCAAAGTCAATGGCATGAACAGTTGGAATGAAGAAGATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CCA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGGAGACAAGAATAAGATaGTTTAGAAGCTTTACCCTT +
Preference number: 4 (lower is better)
Translates to: LEVFQPFSIINSSCFLELETRIR*FRSFTL
Trigger: AAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTC...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
3UTR CAA 72 bp AGTAAAGATTTTCTTAACATGCTCCTGTGTTCATGCTaGGAGACAAGAATAAGATGGTTTAGAAGCTTTACC +
Preference number: 4 (lower is better)
Translates to: SKDFLNMLLCSC*ETRIRWFRSFT
Trigger: GGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCATGAACACAGGAGCATGTTAAGAAAATCTTTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS GCA 90 bp CCTCGCCTCATGGTGGAGCTTCTTCCGCGTTGCCCCAGACCACCATaGCCGGGCCCGGCGGCCTTCTCCGGCCTTGCGGACCCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: PRLMVELLPRCPRPP*PGPAAFSGLADPGP
Trigger: GGGGCCGGGGTCCGCAAGGCCGGAGAAGGCCGCCGGGCCCGGGCATGGTGGTCTGGGGCAACGCGGAAGAAGCTCCACCATGAGGCGAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS TCA 90 bp GGCTCCCTAGCCTACACCTCCCCTCCTGCCCCAAGTGAGAGGCAGTaGATGGCAATGGCCCAAAGTACAGGCTCTCCAATTCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: GSLAYTSPPAPSERQ*MAMAQSTGSPILSL
Trigger: CAAAGAGAGAATTGGAGAGCCTGTACTTTGGGCCATTGCCATTCACTGCCTCTCACTTGGGGCAGGAGGGGAGGTGTAGGCTAGGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465086.1
CDS CCA 90 bp CCTACACCTCCCCTCCTGCCCCAAGTGAGAGGCAGTGAATGGCAATaGCCCAAAGTACAGGCTCTCCAATTCTCTCTTTGCTTTGCCACT +
Preference number: 5 (lower is better)
Translates to: PTPPLLPQVRGSEWQ*PKVQALQFSLCFAT
Trigger: AGTGGCAAAGCAAAGAGAGAATTGGAGAGCCTGTACTTTGGGCCATTGCCATTCACTGCCTCTCACTTGGGGCAGGAGGGGAGGTGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465086.1
CDS-3UTR CAA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAACAGACTTGCTCTACTaGTTCCCGGAGATCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGTDLLY*FPEIRW
Trigger: CCACCTGATCTCCGGGAACAAGTAGAGCAAGTCTGT...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATTTATGGAGCTTCTTCCGCGTaGCCCCAGACCACCATGCCC +
Preference number: 5 (lower is better)
Translates to: QALMAQLSESIRLSGNIYGASSA*PQTTMP
Trigger: GGGCATGGTGGTCTGGGGCAACGCGGAAGAAGCTCC...ATAAATATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGATTGCAGTCTGAAGGTTaGGATGGCACTGAAGGTGCT +
Preference number: 5 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGLQSEG*DGTEGA
Trigger: AGCACCTTCAGTGCCATCCAAACCTTCAGACTGCAA...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CTGGACAGCACAGACTTGCTCTACTTGTTCCCGGAGATCAGGTGGAAGTGCTTCTTGCAGTCTGAAGGTTaGGATGGCACTGAAGGTGCT +
Preference number: 5 (lower is better)
Translates to: LDSTDLLYLFPEIRWKCFLQSEG*DGTEGA
Trigger: AGCACCTTCAGTGCCATCCAAACCTTCAGACTGCAA...GAAGCACTTCCACCTGATCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCAACTCCTGGTAGATaGGTCACTAGCTGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: QVESRSETSQEFQSLAVWPTPGR*VTSWPL
Trigger: CAGAGGCCAGCTAGTGACCAATCTACCAGGAGTTGG...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAGCCCTGCCTTTGTCTTaGATCATACGCTGCTTTCAG +
Preference number: 5 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGALPLS*IIRCFQ
Trigger: CTGAAAGCAGCGTATGATCAAAGACAAAGGCAGGGC...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATACTGCTGGCAACACTGTaGACCATGGGCACCAAGCAA +
Preference number: 5 (lower is better)
Translates to: PHKHLWHSYQRASGSLVILLATL*TMGTKQ
Trigger: TTGCTTGGTGCCCATGGTCAACAGTGTTGCCAGCAG...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp TGGATTCCGCAAAGCATCTGTGTTTCTGGTGCTTTGCTGCAACTGCTGCAGAGTACAGACTTGCTCTACTaGTTCCCGGAGATCAGGTGG +
Preference number: 5 (lower is better)
Translates to: WIPQSICVSGALLQLLQSTDLLY*FPEIRW
Trigger: CCACCTGATCTCCGGGAACAAGTAGAGCAAGTCTGT...ACTCTGCAGCAGTTGCAGCAAAGCACCAGAAACACAGATGCTTTGCGGAATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAACAGCTCCAGCTAGATaGGGTGCTGGAGGTCTCACA +
Preference number: 5 (lower is better)
Translates to: PHKHLWHSYQRASGSLVITAPAR*GAGGLT
Trigger: TGTGAGACCTCCAGCACCCAATCTAGCTGGAGCTGT...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAAACCGATTCCACCGATaGCTGCATCAGCCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGNRFHR*LHQPFH
Trigger: ATGAAAAGGCTGATGCAGCAATCGGTGGAATCGGTT...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS TCA 90 bp TCCCAATTGACCAATTCCATGCTCCTGAAGTGGCTCCACAGTGGTTaGGATGCCAACAGCATTGTACATGGTAGGACATCACTCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SQLTNSMLLKWLHSG*DANSIVHGRTSLWA
Trigger: TGCCCAGAGTGATGTCCTACCATGTACAATGCTGTTGGCATCTCAACCACTGTGGAGCCACTTCAGGAGCATGGAATTGGTCAATTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450415.1
CDS-3UTR CAA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAACTGAAGGTGCTGCCTaGCTAAACGTAGATACTGAA +
Preference number: 5 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGTEGAA*LNVDTE
Trigger: TTCAGTATCTACGTTTAGCAAGGCAGCACCTTCAGT...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAGCCACTGGTTTTCCTTaGAGATCTGGTCTATTTCGT +
Preference number: 5 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGATGFP*RSGLFR
Trigger: ACGAAATAGACCAGATCTCAAAGGAAAACCAGTGGC...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGACTTAGCTTTCTGAACTaGGAAGACATCACGGACAGA +
Preference number: 5 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGLSFLN*EDITDR
Trigger: TCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAG...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGAAGACTCAGCCTaGTTAGTATCAGGACTGGTC +
Preference number: 5 (lower is better)
Translates to: QVESRSETSQEFQSLAVWPEDSA*LVSGLV
Trigger: GACCAGTCCTGATACTAACAAGGCTGAGTCTTCAGG...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCCTGGACAGCACAGACTaGCTCTACTTGTTCCCGGAG +
Preference number: 5 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGLDSTD*LYLFPE
Trigger: CTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAG...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAGACTGTCCCAACTGGTaGTGGCAAAATTCCTGTATT +
Preference number: 5 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGDCPNW*WQNSCI
Trigger: AATACAGGAATTTTGCCACAACCAGTTGGGACAGTC...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CCATGTGACTCTGCTTGCTGGACAGCACAGACTTGCTCTACTTGTTCCCGGAGATTGAGGTTCTGGTATTaGCAACAAGACTGTCCCAAC +
Preference number: 5 (lower is better)
Translates to: PCDSACWTAQTCSTCSRRLRFWY*QQDCPN
Trigger: GTTGGGACAGTCTTGTTGCAAATACCAGAACCTCAA...TCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAGCAAGCAGAGTCACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGTTCTCGCCCTGCCTTaGTCTTTGATCATACGCTGC +
Preference number: 5 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIVLALP*SLIIRC
Trigger: GCAGCGTATGATCAAAGACAAAGGCAGGGCGAGAAC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp CACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGATTTCTTAGCTTTACAGCTCCAGCTAGATaGGGTGCTGGAGGTCTCACA +
Preference number: 5 (lower is better)
Translates to: HSSPKYFFVLLFGGFLSFTAPAR*GAGGLT
Trigger: TGTGAGACCTCCAGCACCCAATCTAGCTGGAGCTGT...AAAGCTAAGAAATCCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGATTTCTTAGCTTTGACTACATCTCAGCCTaGGGCCATCTAACACAGGCC +
Preference number: 5 (lower is better)
Translates to: HSSPKYFFVLLFGGFLSFDYISA*GHLTQA
Trigger: GGCCTGTGTTAGATGGCCCAAGGCTGAGATGTAGTC...AAAGCTAAGAAATCCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS TCA 90 bp ACTGTCCTCACTGGAGGGCAAAGTAGAGAACTGCTCATCAAAACTTaGCAAACTAGACGGGCACATGGAGAATGTGGAGGAACGGTTGGA +
Preference number: 5 (lower is better)
Translates to: TVLTGGQSRELLIKT*QTRRAHGECGGTVG
Trigger: TCCAACCGTTCCTCCACATTCTCCATGTGCCCGTCTAGTTTGTCAAGTTTTGATGAGCAGTTCTCTACTTTGCCCTCCAGTGAGGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486117.1
CDS GCA 90 bp TCTCCTAAAACTCATACCTCTGGCCCCTTTGCAGAGATGCCAGCATaGCATATGCTGGTGATATCACAACCACCACAGAGCAGGAATATG +
Preference number: 5 (lower is better)
Translates to: SPKTHTSGPFAEMPA*HMLVISQPPQSRNM
Trigger: CATATTCCTGCTCTGTGGTGGTTGTGATATCACCAGCATATGGCATGCTGGCATCTCTGCAAAGGGGCCAGAGGTATGAGTTTTAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481719.1
CDS-3UTR CAA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGGGAGCTTCTTCCGCGTaGCCCCAGACCACCATGCCC +
Preference number: 5 (lower is better)
Translates to: LEVFQPFSIINSSCFLELGASSA*PQTTMP
Trigger: GGGCATGGTGGTCTGGGGCAACGCGGAAGAAGCTCC...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGAGGAGTCGTCCAGCTTaGATGCTTTCCACAATCCAT +
Preference number: 5 (lower is better)
Translates to: QVESRSETSQEFQSLAVWRSRPA*MLSTIH
Trigger: ATGGATTGTGGAAAGCATCAAAGCTGGACGACTCCT...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp ATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGAGCTGTTTGGCTATATaGCTTGGACCTGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: IFPDPQQPEILLCAPLRWSCLAI*LGPGRG
Trigger: TCCTCTGCCAGGTCCAAGCAATATAGCCAAACAGCT...CCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CTCTTCGGTGGATTTCTTAGCTTTCTGAACTTGGAAGACATCACGGACAGAGTACTGCTGGCAACACTGTaGACCATGGGCACCAAGCAA +
Preference number: 5 (lower is better)
Translates to: LFGGFLSFLNLEDITDRVLLATL*TMGTKQ
Trigger: TTGCTTGGTGCCCATGGTCAACAGTGTTGCCAGCAG...TACTCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATCCACCGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCTGAAGAAGTGCTTTTaGTGCTTGAAGGCCCCTGAA +
Preference number: 5 (lower is better)
Translates to: QVESRSETSQEFQSLAVWLKKCF*CLKAPE
Trigger: TTCAGGGGCCTTCAAGCACAAAAAGCACTTCTTCAG...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGACATTTCGTCTGGTCTTaGATTTCCATACGAACAGCA +
Preference number: 5 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGHFVWS*ISIRTA
Trigger: TGCTGTTCGTATGGAAATCAAAGACCAGACGAAATG...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp GCCACGGCAGAACCTATAAAGCATCTGACCTGTTTTGGGACCAAATTCTTTTTGCCAACTCCTGGTAGATaGGTCACTAGCTGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: ATAEPIKHLTCFGTKFFLPTPGR*VTSWPL
Trigger: CAGAGGCCAGCTAGTGACCAATCTACCAGGAGTTGG...CAAAAAGAATTTGGTCCCAAAACAGGTCAGATGCTTTATAGGTTCTGCCGTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAGGGACCAAATTCTTTTaGGAGTTTTGCCATGGTCAT +
Preference number: 5 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGGTKFF*EFCHGH
Trigger: ATGACCATGGCAAAACTCCAAAAAGAATTTGGTCCC...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGCCCGAAATACTTCTTaGTGCTCCTCTTCGGTGGAT +
Preference number: 5 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIARNTS*CSSSVD
Trigger: ATCCACCGAAGAGGAGCACAAAGAAGTATTTCGGGC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCACAGACTTGCTCTACTaGTTCCCGGAGATCAGGTGG +
Preference number: 5 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGTDLLY*FPEIRW
Trigger: CCACCTGATCTCCGGGAACAAGTAGAGCAAGTCTGT...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp TCTATACTCAGGTTAAGTCTCGACTGCACACTGACAGGAGTATGTAGACCATTCCTGGACAGCACAGACTaGCTCTACTTGTTCCCGGAG +
Preference number: 5 (lower is better)
Translates to: SILRLSLDCTLTGVCRPFLDSTD*LYLFPE
Trigger: CTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAG...GAATGGTCTACATACTCCTGTCAGTGTGCAGTCGAGACTTAACCTGAGTATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGAGTCACTGTTCGATTCTaGAGGTTCTGGTATTTGCAA +
Preference number: 5 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGVTVRF*RFWYLQ
Trigger: TTGCAAATACCAGAACCTCAAGAATCGAACAGTGAC...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp GCATACAGGATTAAAGCTGAGACCTTTCTGCACACTGGACTGCTTGGTGTACAGGCCCTGCCTTTGTCTTaGATCATACGCTGCTTTCAG +
Preference number: 5 (lower is better)
Translates to: AYRIKAETFLHTGLLGVQALPLS*IIRCFQ
Trigger: CTGAAAGCAGCGTATGATCAAAGACAAAGGCAGGGC...CTGTACACCAAGCAGTCCAGTGTGCAGAAAGGTCTCAGCTTTAATCCTGTATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGAAGTAAAGGATTCTTaGGCACAGATGCGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIEVKDS*AQMRWL
Trigger: CAGCCAGCGCATCTGTGCCAAAGAATCCTTTACTTC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp CTGCTGCCTTTAGATGAAGTAAAGGATTCTTTGGCACAGATGCGCTGGCTGACTGAAGTAAAGGATTCTTaGGCACAGATGCGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LLPLDEVKDSLAQMRWLTEVKDS*AQMRWL
Trigger: CAGCCAGCGCATCTGTGCCAAAGAATCCTTTACTTC...AGTCAGCCAGCGCATCTGTGCCAAAGAATCCTTTACTTCATCTAAAGGCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGAACCGATTCCACCGATaGCTGCATCAGCCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: QVESRSETSQEFQSLAVWNRFHR*LHQPFH
Trigger: ATGAAAAGGCTGATGCAGCAATCGGTGGAATCGGTT...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCTGTTGTTGAGCTGTTaGGCTATATTGCTTGGACCT +
Preference number: 5 (lower is better)
Translates to: QVESRSETSQEFQSLAVWLLLSC*AILLGP
Trigger: AGGTCCAAGCAATATAGCCAAACAGCTCAACAACAG...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCAAGTGCTTTTTGTGCTaGAAGGCCCCTGAACAGTGG +
Preference number: 5 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGKCFLC*KAPEQW
Trigger: CCACTGTTCAGGGGCCTTCAAGCACAAAAAGCACTT...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGACTGAAGGTGCTGCCTaGCTAAACGTAGATACTGAA +
Preference number: 5 (lower is better)
Translates to: QVESRSETSQEFQSLAVWTEGAA*LNVDTE
Trigger: TTCAGTATCTACGTTTAGCAAGGCAGCACCTTCAGT...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp GGTCGGCAGATGTGCAGGAAAAGGTGGCAAGAAAGTGCAAGTTCTAGAAGCAGAACTGAAGGTGCTGCCTaGCTAAACGTAGATACTGAA +
Preference number: 5 (lower is better)
Translates to: GRQMCRKRWQESASSRSRTEGAA*LNVDTE
Trigger: TTCAGTATCTACGTTTAGCAAGGCAGCACCTTCAGT...TCTGCTTCTAGAACTTGCACTTTCTTGCCACCTTTTCCTGCACATCTGCCGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGTCATCAGGAGTAAGTTaGGTCTCTGCAAGGATTTCG +
Preference number: 5 (lower is better)
Translates to: QVESRSETSQEFQSLAVWSSGVS*VSARIS
Trigger: CGAAATCCTTGCAGAGACCAAACTTACTCCTGATGA...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCTTAGCTTTCTGAACTaGGAAGACATCACGGACAGA +
Preference number: 5 (lower is better)
Translates to: QVESRSETSQEFQSLAVWLSFLN*EDITDR
Trigger: TCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAG...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp TGGATTCCGCAAAGCATCTGTGTTTCTGGTGCTTTGCTGCAACTGCTGCAGAGTCTTAGCTTTCTGAACTaGGAAGACATCACGGACAGA +
Preference number: 5 (lower is better)
Translates to: WIPQSICVSGALLQLLQSLSFLN*EDITDR
Trigger: TCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAG...ACTCTGCAGCAGTTGCAGCAAAGCACCAGAAACACAGATGCTTTGCGGAATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCGCCCGAAATACTTCTTaGTGCTCCTCTTCGGTGGAT +
Preference number: 5 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGARNTS*CSSSVD
Trigger: ATCCACCGAAGAGGAGCACAAAGAAGTATTTCGGGC...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp GATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGCCCGAAATACTTCTTaGTGCTCCTCTTCGGTGGAT +
Preference number: 5 (lower is better)
Translates to: DDISRSTAARNTSLCSSSARNTS*CSSSVD
Trigger: ATCCACCGAAGAGGAGCACAAAGAAGTATTTCGGGC...CGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
CDS-3UTR CAA 90 bp CCCTGGCAGAGTTTTTGCAGGACTGTTAAGCAGCTTGTTATTCAAAGGACTCTGCCTGAAGACTCAGCCTaGTTAGTATCAGGACTGGTC +
Preference number: 5 (lower is better)
Translates to: PWQSFCRTVKQLVIQRTLPEDSA*LVSGLV
Trigger: GACCAGTCCTGATACTAACAAGGCTGAGTCTTCAGG...CAGAGTCCTTTGAATAACAAGCTGCTTAACAGTCCTGCAAAAACTCTGCCAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp ATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGAACCGATTCCACCGATaGCTGCATCAGCCTTTTCAT +
Preference number: 5 (lower is better)
Translates to: IFPDPQQPEILLCAPLRWNRFHR*LHQPFH
Trigger: ATGAAAAGGCTGATGCAGCAATCGGTGGAATCGGTT...CCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGAAGCTTTACCCTTTCTaGGAACAAGTAGAATCCCGG +
Preference number: 5 (lower is better)
Translates to: QVESRSETSQEFQSLAVWKLYPF*EQVESR
Trigger: CCGGGATTCTACTTGTTCCAAGAAAGGGTAAAGCTT...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp GCGCCAGGACGTAAAGGTGCCCTTCCTGTGCCTCTGTTACTTGTAACAGCCACTTCTGGTATATCTGCTTaGCCTTTCAGGATTTTATTC +
Preference number: 5 (lower is better)
Translates to: APGRKGALPVPLLLVTATSGISA*PFRILF
Trigger: GAATAAAATCCTGAAAGGCAAAGCAGATATACCAGA...AGTGGCTGTTACAAGTAACAGAGGCACAGGAAGGGCACCTTTACGTCCTGGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGATTCATGCCATTGACTTaGACTTCATTTTCCGTTTCA +
Preference number: 5 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGFMPLT*TSFSVS
Trigger: TGAAACGGAAAATGAAGTCAAAGTCAATGGCATGAA...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp GCCACGGCAGAACCTATAAAGCATCTGACCTGTTTTGGGACCAAATTCTTTTTGTGTGTTTCTGGTGCTTaGCTGCAACTGCTGCAGAGT +
Preference number: 5 (lower is better)
Translates to: ATAEPIKHLTCFGTKFFLCVSGA*LQLLQS
Trigger: ACTCTGCAGCAGTTGCAGCAAAGCACCAGAAACACA...CAAAAAGAATTTGGTCCCAAAACAGGTCAGATGCTTTATAGGTTCTGCCGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGATTTCTTAGCTTTCTGAAGAAGTGCTTTTaGTGCTTGAAGGCCCCTGAA +
Preference number: 5 (lower is better)
Translates to: HSSPKYFFVLLFGGFLSFLKKCF*CLKAPE
Trigger: TTCAGGGGCCTTCAAGCACAAAAAGCACTTCTTCAG...AAAGCTAAGAAATCCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGATCAATTCCATTTGCTaGCGCAGAATCTGGATTCTC +
Preference number: 5 (lower is better)
Translates to: QVESRSETSQEFQSLAVWINSIC*RRIWIL
Trigger: GAGAATCCAGATTCTGCGCAAGCAAATGGAATTGAT...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCAGAATCAATTCCATTaGCTTGCGCAGAATCTGGAT +
Preference number: 5 (lower is better)
Translates to: QVESRSETSQEFQSLAVWQNQFH*LAQNLD
Trigger: ATCCAGATTCTGCGCAAGCAAATGGAATTGATTCTG...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp GAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCCTGGATGTTATGAGTGTAGCTaGCCAATGTTTCATACAATG +
Preference number: 5 (lower is better)
Translates to: ESRSETSQEFQSLAVWPGCYECS*PMFHTM
Trigger: CATTGTATGAAACATTGGCAAGCTACACTCATAACA...TCCAGGCCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CAGCCAGCTGGGTCAGACTGCAAACTAGAAAGGCCTGGCACACCTGAAGTAGAACCTTTCCAATTATTTTaGCATTATCTGTTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: QPAGSDCKLERPGTPEVEPFQLF*HYLLPG
Trigger: ACCAGGCAACAGATAATGCAAAAATAATTGGAAAGG...TTCTACTTCAGGTGTGCCAGGCCTTTCTAGTTTGCAGTCTGACCCAGCTGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp TCTATACTCAGGTTAAGTCTCGACTGCACACTGACAGGAGTATGTAGACCATTCCCTGAAGACTCAGCCTaGTTAGTATCAGGACTGGTC +
Preference number: 5 (lower is better)
Translates to: SILRLSLDCTLTGVCRPFPEDSA*LVSGLV
Trigger: GACCAGTCCTGATACTAACAAGGCTGAGTCTTCAGG...GAATGGTCTACATACTCCTGTCAGTGTGCAGTCGAGACTTAACCTGAGTATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
CDS-3UTR CAA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTGGACAGCACAGACTaGCTCTACTTGTTCCCGGAG +
Preference number: 5 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFLDSTD*LYLFPE
Trigger: CTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAG...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGACTGTCCCAACTGGTaGTGGCAAAATTCCTGTATT +
Preference number: 5 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIDCPNW*WQNSCI
Trigger: AATACAGGAATTTTGCCACAACCAGTTGGGACAGTC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCACAGCTCCAGCTAGATaGGGTGCTGGAGGTCTCACA +
Preference number: 5 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFTAPAR*GAGGLT
Trigger: TGTGAGACCTCCAGCACCCAATCTAGCTGGAGCTGT...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp GTTCCCGGAGATCAGGTGGAAGTGCTTCTAAAACAGACTGATCCAGCTGGGAAGTTACTATCATGCACTTaGCAAATACCTCACAAGCAC +
Preference number: 5 (lower is better)
Translates to: VPGDQVEVLLKQTDPAGKLLSCT*QIPHKH
Trigger: GTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTAA...CTTCCCAGCTGGATCAGTCTGTTTTAGAAGCACTTCCACCTGATCTCCGGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATACTCCTGTGTTCATGCTaGGAGACAAGAATAAGATGG +
Preference number: 5 (lower is better)
Translates to: PHKHLWHSYQRASGSLVILLCSC*ETRIRW
Trigger: CCATCTTATTCTTGTCTCCAAGCATGAACACAGGAG...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CCATGTGACTCTGCTTGCTGGACAGCACAGACTTGCTCTACTTGTTCCCGGAGATCTACTAGCTGCTCTTaGAAAACTAATTACTCCAGA +
Preference number: 5 (lower is better)
Translates to: PCDSACWTAQTCSTCSRRSTSCS*KTNYSR
Trigger: TCTGGAGTAATTAGTTTTCAAAGAGCAGCTAGTAGA...TCTCCGGGAACAAGTAGAGCAAGTCTGTGCTGTCCAGCAAGCAGAGTCACATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CTCTTCGGTGGATTTCTTAGCTTTCTGAACTTGGAAGACATCACGGACAGAGTAAGGAGTCGTCCAGCTTaGATGCTTTCCACAATCCAT +
Preference number: 5 (lower is better)
Translates to: LFGGFLSFLNLEDITDRVRSRPA*MLSTIH
Trigger: ATGGATTGTGGAAAGCATCAAAGCTGGACGACTCCT...TACTCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATCCACCGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCCTGTTGTTGAGCTGTTaGGCTATATTGCTTGGACCT +
Preference number: 5 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGLLLSC*AILLGP
Trigger: AGGTCCAAGCAATATAGCCAAACAGCTCAACAACAG...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGCAACTGTTCATGCCATaGACTTTGACTTCATTTTCC +
Preference number: 5 (lower is better)
Translates to: QVESRSETSQEFQSLAVWQLFMP*TLTSFS
Trigger: GGAAAATGAAGTCAAAGTCAATGGCATGAACAGTTG...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCATCAGGAGTAAGTTaGGTCTCTGCAAGGATTTCG +
Preference number: 5 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGSSGVS*VSARIS
Trigger: CGAAATCCTTGCAGAGACCAAACTTACTCCTGATGA...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGCCAACTCCTGGTAGATaGGTCACTAGCTGGCCTCTG +
Preference number: 5 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKPTPGR*VTSWPL
Trigger: CAGAGGCCAGCTAGTGACCAATCTACCAGGAGTTGG...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGGGACCAAATTCTTTTaGGAGTTTTGCCATGGTCAT +
Preference number: 5 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIGTKFF*EFCHGH
Trigger: ATGACCATGGCAAAACTCCAAAAAGAATTTGGTCCC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCACTGGTTCTTTCTTTTaGTCGCCATGTGACTCTGCT +
Preference number: 5 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGTGSFF*SPCDSA
Trigger: AGCAGAGTCACATGGCGACAAAAAGAAAGAACCAGT...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp ATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGACTGGTTCTTTCTTTTaGTCGCCATGTGACTCTGCT +
Preference number: 5 (lower is better)
Translates to: MIFPDPQQPEILLCAPLRTGSFF*SPCDSA
Trigger: AGCAGAGTCACATGGCGACAAAAAGAAAGAACCAGT...CCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp GCAGATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTGACTGTCCCAACTGGTaGTGGCAAAATTCCTGTATT +
Preference number: 5 (lower is better)
Translates to: ADDISRSTAARNTSLCSSDCPNW*WQNSCI
Trigger: AATACAGGAATTTTGCCACAACCAGTTGGGACAGTC...AGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATAGTCACTGTTCGATTCTaGAGGTTCTGGTATTTGCAA +
Preference number: 5 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIVTVRF*RFWYLQ
Trigger: TTGCAAATACCAGAACCTCAAGAATCGAACAGTGAC...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp CCCTGGCAGAGTTTTTGCAGGACTGTTAAGCAGCTTGTTATTCAAAGGACTCTGGAATGTCTTCTTCCATaGGATCTAGGAAGGGGGAAA +
Preference number: 5 (lower is better)
Translates to: PWQSFCRTVKQLVIQRTLECLLP*DLGRGK
Trigger: TTTCCCCCTTCCTAGATCCAATGGAAGAAGACATTC...CAGAGTCCTTTGAATAACAAGCTGCTTAACAGTCCTGCAAAAACTCTGCCAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS CCA 90 bp GCAGAGCTTTCCTCTATTATCAGTCTCATCCTTAGCCTGTTCGTCTaGTCCTCTAAGATACACAAATCCTGTGTCAGTTACAACAAGTGC +
Preference number: 5 (lower is better)
Translates to: AELSSIISLILSLFV*SSKIHKSCVSYNKC
Trigger: GCACTTGTTGTAACTGACACAGGATTTGTGTATCTTAGAGGACCAGACGAACAGGCTAAGGATGAGACTGATAATAGAGGAAAGCTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482887.1
CDS-3UTR CAA 90 bp TGGATTCCGCAAAGCATCTGTGTTTCTGGTGCTTTGCTGCAACTGCTGCAGAGTTTCATGCCATTGACTTaGACTTCATTTTCCGTTTCA +
Preference number: 5 (lower is better)
Translates to: WIPQSICVSGALLQLLQSFMPLT*TSFSVS
Trigger: TGAAACGGAAAATGAAGTCAAAGTCAATGGCATGAA...ACTCTGCAGCAGTTGCAGCAAAGCACCAGAAACACAGATGCTTTGCGGAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp GCATACAGGATTAAAGCTGAGACCTTTCTGCACACTGGACTGCTTGGTGTACAGCAACTGTTCATGCCATaGACTTTGACTTCATTTTCC +
Preference number: 5 (lower is better)
Translates to: AYRIKAETFLHTGLLGVQQLFMP*TLTSFS
Trigger: GGAAAATGAAGTCAAAGTCAATGGCATGAACAGTTG...CTGTACACCAAGCAGTCCAGTGTGCAGAAAGGTCTCAGCTTTAATCCTGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCTGTGTTTCTGGTGCTTaGCTGCAACTGCTGCAGAGT +
Preference number: 5 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFCVSGA*LQLLQS
Trigger: ACTCTGCAGCAGTTGCAGCAAAGCACCAGAAACACA...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGTGTCTTTGTAGGGTATaGACAAACTCAGTCAATTCA +
Preference number: 5 (lower is better)
Translates to: QVESRSETSQEFQSLAVWCLCRV*TNSVNS
Trigger: TGAATTGACTGAGTTTGTCAATACCCTACAAAGACA...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCCAGAATCAATTCCATTaGCTTGCGCAGAATCTGGAT +
Preference number: 5 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGQNQFH*LAQNLD
Trigger: ATCCAGATTCTGCGCAAGCAAATGGAATTGATTCTG...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp CAAGTAGAATCCCGGTCTGAGACCTCTCAGGAATTTCAGAGCTTAGCAGTCTGGATGCAATTTCAGCCCTaGACAAAACAGAATCAATTC +
Preference number: 5 (lower is better)
Translates to: QVESRSETSQEFQSLAVWMQFQP*TKQNQF
Trigger: GAATTGATTCTGTTTTGTCAAGGGCTGAAATTGCAT...CCAGACTGCTAAGCTCTGAAATTCCTGAGAGGTCTCAGACCGGGATTCTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp GTTGTTGAGCTGTTTGGCTATATTGCTTGGACCTGGCAGAGGATCCTCAGGTCTATGCAATTTCAGCCCTaGACAAAACAGAATCAATTC +
Preference number: 5 (lower is better)
Translates to: VVELFGYIAWTWQRILRSMQFQP*TKQNQF
Trigger: GAATTGATTCTGTTTTGTCAAGGGCTGAAATTGCAT...AGACCTGAGGATCCTCTGCCAGGTCCAAGCAATATAGCCAAACAGCTCAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGATTTCTTAGCTTTCATTTCGTCTGGTCTTaGATTTCCATACGAACAGCA +
Preference number: 5 (lower is better)
Translates to: HSSPKYFFVLLFGGFLSFHFVWS*ISIRTA
Trigger: TGCTGTTCGTATGGAAATCAAAGACCAGACGAAATG...AAAGCTAAGAAATCCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp TCTATACTCAGGTTAAGTCTCGACTGCACACTGACAGGAGTATGTAGACCATTCCTTAGCTTTCTGAACTaGGAAGACATCACGGACAGA +
Preference number: 5 (lower is better)
Translates to: SILRLSLDCTLTGVCRPFLSFLN*EDITDR
Trigger: TCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAG...GAATGGTCTACATACTCCTGTCAGTGTGCAGTCGAGACTTAACCTGAGTATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
CDS-3UTR CAA 90 bp GATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGAACTGGAAAATACATaGCCCTTCTACTGGATGAAG +
Preference number: 5 (lower is better)
Translates to: DDISRSTAARNTSLCSSSELENT*PFYWMK
Trigger: CTTCATCCAGTAGAAGGGCAATGTATTTTCCAGTTC...CGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGAGCTGTTTGGCTATATaGCTTGGACCTGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKSCLAI*LGPGRG
Trigger: TCCTCTGCCAGGTCCAAGCAATATAGCCAAACAGCT...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGAAGTGCTTTTTGTGCTaGAAGGCCCCTGAACAGTGG +
Preference number: 5 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKKCFLC*KAPEQW
Trigger: CCACTGTTCAGGGGCCTTCAAGCACAAAAAGCACTT...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp ATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTGGTGTCTTTGTAGGGTATaGACAAACTCAGTCAATTCA +
Preference number: 5 (lower is better)
Translates to: IFPDPQQPEILLCAPLRWCLCRV*TNSVNS
Trigger: TGAATTGACTGAGTTTGTCAATACCCTACAAAGACA...CCACCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp GCCACGGCAGAACCTATAAAGCATCTGACCTGTTTTGGGACCAAATTCTTTTTGATCAATTCCATTTGCTaGCGCAGAATCTGGATTCTC +
Preference number: 5 (lower is better)
Translates to: ATAEPIKHLTCFGTKFFLINSIC*RRIWIL
Trigger: GAGAATCCAGATTCTGCGCAAGCAAATGGAATTGAT...CAAAAAGAATTTGGTCCCAAAACAGGTCAGATGCTTTATAGGTTCTGCCGTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATGTTTCATACAATGTTaGTGCGACTTCCTTATATGC +
Preference number: 5 (lower is better)
Translates to: PHKHLWHSYQRASGSLVICFIQC*CDFLIC
Trigger: GCATATAAGGAAGTCGCACAAACATTGTATGAAACA...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp GCATACAGGATTAAAGCTGAGACCTTTCTGCACACTGGACTGCTTGGTGTACAGTGTTATGAGTGTAGCTaGCCAATGTTTCATACAATG +
Preference number: 5 (lower is better)
Translates to: AYRIKAETFLHTGLLGVQCYECS*PMFHTM
Trigger: CATTGTATGAAACATTGGCAAGCTACACTCATAACA...CTGTACACCAAGCAGTCCAGTGTGCAGAAAGGTCTCAGCTTTAATCCTGTATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATATTTATTCATCAGGAGTAAGTTaGGTCTCTGCAAGGATTTCG +
Preference number: 5 (lower is better)
Translates to: QALMAQLSESIRLSGNIYSSGVS*VSARIS
Trigger: CGAAATCCTTGCAGAGACCAAACTTACTCCTGATGA...ATAAATATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTCTCTGGTAATACCTTTCCAATTATTTTaGCATTATCTGTTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: PHKHLWHSYQRASGSLVIPFQLF*HYLLPG
Trigger: ACCAGGCAACAGATAATGCAAAAATAATTGGAAAGG...TATTACCAGAGAGCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGGCCCTGCCTTTGTCTTaGATCATACGCTGCTTTCAG +
Preference number: 5 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKALPLS*IIRCFQ
Trigger: CTGAAAGCAGCGTATGATCAAAGACAAAGGCAGGGC...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp GTAGCTTGCCAATGTTTCATACAATGTTTGTGCGACTTCCTTATATGCATGAAAGTTCTCGCCCTGCCTTaGTCTTTGATCATACGCTGC +
Preference number: 5 (lower is better)
Translates to: VACQCFIQCLCDFLICMKVLALP*SLIIRC
Trigger: GCAGCGTATGATCAAAGACAAAGGCAGGGCGAGAAC...TTTCATGCATATAAGGAAGTCGCACAAACATTGTATGAAACATTGGCAAGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS TCA 90 bp TTTGAGGGACCTGGCCTCATAACTACAAGATGCAATTTCAGCCCTTaGCAAAACAGAATCAATTCCATTTGCTTGCGCAGAATCTGGATT +
Preference number: 5 (lower is better)
Translates to: FEGPGLITTRCNFSP*QNRINSICLRRIWI
Trigger: AATCCAGATTCTGCGCAAGCAAATGGAATTGATTCTGTTTTGTCAAGGGCTGAAATTGCATCTTGTAGTTATGAGGCCAGGTCCCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450415.1
CDS-3UTR CAA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGGTTTGGCTATATTGCTaGGACCTGGCAGAGGATCCT +
Preference number: 5 (lower is better)
Translates to: LEVFQPFSIINSSCFLELVWLYC*DLAEDP
Trigger: AGGATCCTCTGCCAGGTCCAAGCAATATAGCCAAAC...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGAGCTGTTTGGCTATATaGCTTGGACCTGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: LEVFQPFSIINSSCFLELSCLAI*LGPGRG
Trigger: TCCTCTGCCAGGTCCAAGCAATATAGCCAAACAGCT...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTTCATGCCATTGACTTaGACTTCATTTTCCGTTTCA +
Preference number: 5 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGFMPLT*TSFSVS
Trigger: TGAAACGGAAAATGAAGTCAAAGTCAATGGCATGAA...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp TCTCCACAAGTTTTAATTCCCAAAGATGCCAACTTAGATTCCATTGAATGTCCAAAGTGCTTTTTGTGCTaGAAGGCCCCTGAACAGTGG +
Preference number: 5 (lower is better)
Translates to: SPQVLIPKDANLDSIECPKCFLC*KAPEQW
Trigger: CCACTGTTCAGGGGCCTTCAAGCACAAAAAGCACTT...TGGACATTCAATGGAATCTAAGTTGGCATCTTTGGGAATTAAAACTTGTGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGCTGAAGAAGTGCTTTTaGTGCTTGAAGGCCCCTGAA +
Preference number: 5 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKLKKCF*CLKAPE
Trigger: TTCAGGGGCCTTCAAGCACAAAAAGCACTTCTTCAG...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCTGTCTTTGTAGGGTATaGACAAACTCAGTCAATTCA +
Preference number: 5 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGCLCRV*TNSVNS
Trigger: TGAATTGACTGAGTTTGTCAATACCCTACAAAGACA...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCATGCAATTTCAGCCCTaGACAAAACAGAATCAATTC +
Preference number: 5 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGMQFQP*TKQNQF
Trigger: GAATTGATTCTGTTTTGTCAAGGGCTGAAATTGCAT...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp ACTTTGCAAATACCTCACAAGCACTTATGGCACAGCTATCAGAGAGCATCAGGCCCTTTCCAATTATTTTaGCATTATCTGTTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: TLQIPHKHLWHSYQRASGPFQLF*HYLLPG
Trigger: ACCAGGCAACAGATAATGCAAAAATAATTGGAAAGG...GCCTGATGCTCTCTGATAGCTGTGCCATAAGTGCTTGTGAGGTATTTGCAAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS-3UTR CAA 90 bp TCTCCACAAGTTTTAATTCCCAAAGATGCCAACTTAGATTCCATTGAATGTCCAGCCCGAAATACTTCTTaGTGCTCCTCTTCGGTGGAT +
Preference number: 5 (lower is better)
Translates to: SPQVLIPKDANLDSIECPARNTS*CSSSVD
Trigger: ATCCACCGAAGAGGAGCACAAAGAAGTATTTCGGGC...TGGACATTCAATGGAATCTAAGTTGGCATCTTTGGGAATTAAAACTTGTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGCCTGAAGACTCAGCCTaGTTAGTATCAGGACTGGTC +
Preference number: 5 (lower is better)
Translates to: LEVFQPFSIINSSCFLELPEDSA*LVSGLV
Trigger: GACCAGTCCTGATACTAACAAGGCTGAGTCTTCAGG...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCACTGGTTCTTTCTTTTaGTCGCCATGTGACTCTGCT +
Preference number: 5 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFTGSFF*SPCDSA
Trigger: AGCAGAGTCACATGGCGACAAAAAGAAAGAACCAGT...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCTTGAGGTTCTGGTATTaGCAACAAGACTGTCCCAAC +
Preference number: 5 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFLRFWY*QQDCPN
Trigger: GTTGGGACAGTCTTGTTGCAAATACCAGAACCTCAA...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGGAAGTAAAGGATTCTTaGGCACAGATGCGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LEVFQPFSIINSSCFLELEVKDS*AQMRWL
Trigger: CAGCCAGCGCATCTGTGCCAAAGAATCCTTTACTTC...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTCCTGTGTTCATGCTaGGAGACAAGAATAAGATGG +
Preference number: 5 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFLLCSC*ETRIRW
Trigger: CCATCTTATTCTTGTCTCCAAGCATGAACACAGGAG...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp AAGCAGATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCAGAATTTAAAAGATTaGGGGGTAGCTGCTTTAAGC +
Preference number: 5 (lower is better)
Translates to: KQMIFPDPQQPEILLCAPQNLKD*GVAALS
Trigger: GCTTAAAGCAGCTACCCCCAAATCTTTTAAATTCTG...AGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCATCTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp ATGATATTTCCAGATCCACAGCAGCCCGAAATACTTCTTTGTGCTCCTCTTCGGTCAAAGGAATGGGCTTaGTTACTTTTCAAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: MIFPDPQQPEILLCAPLRSKEWA*LLFKAS
Trigger: ACTTGCTTTGAAAAGTAACAAAGCCCATTCCTTTGA...CCGAAGAGGAGCACAAAGAAGTATTTCGGGCTGCTGTGGATCTGGAAATATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp TCTTTTCTTTCACTGCTGCCTTTAGATGAAGTAAAGGATTCTTTGGCACAGATGCTGTTGTTGAGCTGTTaGGCTATATTGCTTGGACCT +
Preference number: 5 (lower is better)
Translates to: SFLSLLPLDEVKDSLAQMLLLSC*AILLGP
Trigger: AGGTCCAAGCAATATAGCCAAACAGCTCAACAACAG...CATCTGTGCCAAAGAATCCTTTACTTCATCTAAAGGCAGCAGTGAAAGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CTCTTCGGTGGATTTCTTAGCTTTCTGAACTTGGAAGACATCACGGACAGAGTATGTTTCATACAATGTTaGTGCGACTTCCTTATATGC +
Preference number: 5 (lower is better)
Translates to: LFGGFLSFLNLEDITDRVCFIQC*CDFLIC
Trigger: GCATATAAGGAAGTCGCACAAACATTGTATGAAACA...TACTCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATCCACCGAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CTCTTCGGTGGATTTCTTAGCTTTCTGAACTTGGAAGACATCACGGACAGAGTACCTTTCCAATTATTTTaGCATTATCTGTTGCCTGGT +
Preference number: 5 (lower is better)
Translates to: LFGGFLSFLNLEDITDRVPFQLF*HYLLPG
Trigger: ACCAGGCAACAGATAATGCAAAAATAATTGGAAAGG...TACTCTGTCCGTGATGTCTTCCAAGTTCAGAAAGCTAAGAAATCCACCGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000413697.5
ENST00000438366.1
CDS-3UTR CAA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGTTGAGGTTCTGGTATTaGCAACAAGACTGTCCCAAC +
Preference number: 5 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKLRFWY*QQDCPN
Trigger: GTTGGGACAGTCTTGTTGCAAATACCAGAACCTCAA...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS TCA 90 bp CCCTTCTACTGGATGAAGTTAAGAGGGCTCTTTGAAGTTCACTTCTaGAAGCTCTTACATATTCTTCAGTGTGAAGTGAAGCATGAAAAC +
Preference number: 5 (lower is better)
Translates to: PFYWMKLRGLFEVHF*KLLHILQCEVKHEN
Trigger: GTTTTCATGCTTCACTTCACACTGAAGAATATGTAAGAGCTTTCAGAAGTGAACTTCAAAGAGCCCTCTTAACTTCATCCAGTAGAAGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS TCA 90 bp AGTACAGGCTCTCCAATTCTCTCTTTGCTTTGCCACTTACTAATTTaGCCTTTGGCATGTTGCTCATCTATGATGGGTAGTACTAAATGT +
Preference number: 5 (lower is better)
Translates to: STGSPILSLLCHLLI*PLACCSSMMGSTKC
Trigger: ACATTTAGTACTACCCATCATAGATGAGCAACATGCCAAAGGTCAAATTAGTAAGTGGCAAAGCAAAGAGAGAATTGGAGAGCCTGTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465086.1
CDS CCA 90 bp GCACTAAGAGCAGATGGATATAAGATCCTCAACAAAATGATAGTATaGATAGTCTGGATGACAGTATTGGGTTCTCTTTTCTCCTCCCAA +
Preference number: 5 (lower is better)
Translates to: ALRADGYKILNKMIV*IVWMTVLGSLFSSQ
Trigger: TTGGGAGGAGAAAAGAGAACCCAATACTGTCATCCAGACTATCCATACTATCATTTTGTTGAGGATCTTATATCCATCTGCTCTTAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465086.1
CDS CCA 90 bp ATGACACATGTAGATGTGCCAACTATGTCATTAAAATACCAGGTTTaGCTCTTGTATCTGAAGCTTTCTCCTAAAACTCATACCTCTGGC +
Preference number: 5 (lower is better)
Translates to: MTHVDVPTMSLKYQV*LLYLKLSPKTHTSG
Trigger: GCCAGAGGTATGAGTTTTAGGAGAAAGCTTCAGATACAAGAGCCAAACCTGGTATTTTAATGACATAGTTGGCACATCTACATGTGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481719.1
CDS-3UTR CAA 90 bp TCTCCACAAGTTTTAATTCCCAAAGATGCCAACTTAGATTCCATTGAATGTCCAGCCACTGGTTTTCCTTaGAGATCTGGTCTATTTCGT +
Preference number: 5 (lower is better)
Translates to: SPQVLIPKDANLDSIECPATGFP*RSGLFR
Trigger: ACGAAATAGACCAGATCTCAAAGGAAAACCAGTGGC...TGGACATTCAATGGAATCTAAGTTGGCATCTTTGGGAATTAAAACTTGTGGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCCTAGAGTTGAAGCTTTACCCTTTCTaGGAACAAGTAGAATCCCGG +
Preference number: 5 (lower is better)
Translates to: LEVFQPFSIINSSCFLELKLYPF*EQVESR
Trigger: CCGGGATTCTACTTGTTCCAAGAAAGGGTAAAGCTT...CAACTCTAGGAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS TCA 90 bp GCAAGAATACAGACCTTTGAGATCTGGTCTATTTCGTATACCCACTaGTACAAAGAAGCAATCCATATCAACATGCATTATACAGCTCTG +
Preference number: 5 (lower is better)
Translates to: ARIQTFEIWSISYTH*YKEAIHINMHYTAL
Trigger: CAGAGCTGTATAATGCATGTTGATATGGATTGCTTCTTTGTATCAGTGGGTATACGAAATAGACCAGATCTCAAAGGTCTGTATTCTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491752.1
CDS-3UTR CAA 90 bp TTCAATGTTATGAGTGTAGCTTGCCAATGTTTCATACAATGTTTGTGCGACTTCCAGAATCAATTCCATTaGCTTGCGCAGAATCTGGAT +
Preference number: 5 (lower is better)
Translates to: FNVMSVACQCFIQCLCDFQNQFH*LAQNLD
Trigger: ATCCAGATTCTGCGCAAGCAAATGGAATTGATTCTG...GAAGTCGCACAAACATTGTATGAAACATTGGCAAGCTACACTCATAACATTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCTGTTATGAGTGTAGCTaGCCAATGTTTCATACAATG +
Preference number: 5 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFCYECS*PMFHTM
Trigger: CATTGTATGAAACATTGGCAAGCTACACTCATAACA...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCATTCTTTTTGGAGTTTaGCCATGGTCATATACTGCA +
Preference number: 5 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFILFGV*PWSYTA
Trigger: TGCAGTATATGACCATGGCAAAACTCCAAAAAGAAT...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp TCATCTTCTTCATTCCAACTGTTCATGCCATTGACTTTGACTTCATTTTCCGTTGTCACTGTTCGATTCTaGAGGTTCTGGTATTTGCAA +
Preference number: 5 (lower is better)
Translates to: SSSSFQLFMPLTLTSFSVVTVRF*RFWYLQ
Trigger: TTGCAAATACCAGAACCTCAAGAATCGAACAGTGAC...AACGGAAAATGAAGTCAAAGTCAATGGCATGAACAGTTGGAATGAAGAAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS-3UTR CAA 90 bp TGCTTGGAGACAAGAATAAGATGGTTTAGAAGCTTTACCCTTTCTTGGAACAAGTTACTATCATGCACTTaGCAAATACCTCACAAGCAC +
Preference number: 5 (lower is better)
Translates to: CLETRIRWFRSFTLSWNKLLSCT*QIPHKH
Trigger: GTGCTTGTGAGGTATTTGCAAAGTGCATGATAGTAA...CTTGTTCCAAGAAAGGGTAAAGCTTCTAAACCATCTTATTCTTGTCTCCAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS-3UTR CAA 90 bp CAGTCTGGCCTGGAGGTTTTTCAGCCTTTTAGTATAATAAACAGTAGTTGCTTCTCTGGTATATCTGCTTaGCCTTTCAGGATTTTATTC +
Preference number: 5 (lower is better)
Translates to: QSGLEVFQPFSIINSSCFSGISA*PFRILF
Trigger: GAATAAAATCCTGAAAGGCAAAGCAGATATACCAGA...GAAGCAACTACTGTTTATTATACTAAAAGGCTGAAAAACCTCCAGGCCAGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000393445.7
CDS TCA 90 bp ACTGATACAAAGAAGCAATCCATATCAACATGCATTATACAGCTCTaGTGTCTGGGAGAATTCAATACTGACATATCTCCTAAGGACAAA +
Preference number: 5 (lower is better)
Translates to: TDTKKQSISTCIIQL*CLGEFNTDISPKDK
Trigger: TTTGTCCTTAGGAGATATGTCAGTATTGAATTCTCCCAGACATCAGAGCTGTATAATGCATGTTGATATGGATTGCTTCTTTGTATCAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482887.1
CDS-3UTR CAA 90 bp TTCAATGTTATGAGTGTAGCTTGCCAATGTTTCATACAATGTTTGTGCGACTTCATTCTTTTTGGAGTTTaGCCATGGTCATATACTGCA +
Preference number: 5 (lower is better)
Translates to: FNVMSVACQCFIQCLCDFILFGV*PWSYTA
Trigger: TGCAGTATATGACCATGGCAAAACTCCAAAAAGAAT...GAAGTCGCACAAACATTGTATGAAACATTGGCAAGCTACACTCATAACATTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS GCA 72 bp ATGGTGGAGCTTCTTCCGCGTTGCCCCAGACCACCATaGCCGGGCCCGGCGGCCTTCTCCGGCCTTGCGGAC +
Preference number: 6 (lower is better)
Translates to: MVELLPRCPRPP*PGPAAFSGLAD
Trigger: GTCCGCAAGGCCGGAGAAGGCCGCCGGGCCCGGGCATGGTGGTCTGGGGCAACGCGGAAGAAGCTCCACCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS CCA 72 bp CCCCTCCTGCCCCAAGTGAGAGGCAGTGAATGGCAATaGCCCAAAGTACAGGCTCTCCAATTCTCTCTTTGC +
Preference number: 6 (lower is better)
Translates to: PLLPQVRGSEWQ*PKVQALQFSLC
Trigger: GCAAAGAGAGAATTGGAGAGCCTGTACTTTGGGCCATTGCCATTCACTGCCTCTCACTTGGGGCAGGAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465086.1
CDS GCA 72 bp ACTCATACCTCTGGCCCCTTTGCAGAGATGCCAGCATaGCATATGCTGGTGATATCACAACCACCACAGAGC +
Preference number: 6 (lower is better)
Translates to: THTSGPFAEMPA*HMLVISQPPQS
Trigger: GCTCTGTGGTGGTTGTGATATCACCAGCATATGGCATGCTGGCATCTCTGCAAAGGGGCCAGAGGTATGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481719.1
CDS CAA 72 bp GCATCTGATCGAAACTGTTCCTCCAATTTCTGGACCTaGGCAGCCATATACCCACCCCATGTTTCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: ASDRNCSSNFWT*AAIYPPHVSQP
Trigger: TGGCTGGGAAACATGGGGTGGGTATATGGCTGCCAAGGTCCAGAAATTGGAGGAACAGTTTCGATCAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS CAA 72 bp AAACTAGACGGGCACATGGAGAATGTGGAGGAACGGTaGGAGAAATCAGAGGCCAGGACCCAAGTCTGCTTT +
Preference number: 6 (lower is better)
Translates to: KLDGHMENVEER*EKSEARTQVCF
Trigger: AAAGCAGACTTGGGTCCTGGCCTCTGATTTCTCCAACCGTTCCTCCACATTCTCCATGTGCCCGTCTAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486117.1
CDS CAA 90 bp AAACTTGACAAACTAGACGGGCACATGGAGAATGTGGAGGAACGGTaGGAGAAATCAGAGGCCAGGACCCAAGTCTGCTTTGCCTTTCAG +
Preference number: 6 (lower is better)
Translates to: KLDKLDGHMENVEER*EKSEARTQVCFAFQ
Trigger: CTGAAAGGCAAAGCAGACTTGGGTCCTGGCCTCTGATTTCTCCAACCGTTCCTCCACATTCTCCATGTGCCCGTCTAGTTTGTCAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486117.1
CDS CCA 72 bp CATCTGATCGAAACTGTTCCTCCAATTTCTGGACCTTaGCAGCCATATACCCACCCCATGTTTCCCAGCCAT +
Preference number: 6 (lower is better)
Translates to: HLIETVPPISGP*QPYTHPMFPSH
Trigger: ATGGCTGGGAAACATGGGGTGGGTATATGGCTGCCAAGGTCCAGAAATTGGAGGAACAGTTTCGATCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
CDS TCA 72 bp ACCAATTCCATGCTCCTGAAGTGGCTCCACAGTGGTTaGGATGCCAACAGCATTGTACATGGTAGGACATCA +
Preference number: 6 (lower is better)
Translates to: TNSMLLKWLHSG*DANSIVHGRTS
Trigger: TGATGTCCTACCATGTACAATGCTGTTGGCATCTCAACCACTGTGGAGCCACTTCAGGAGCATGGAATTGGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450415.1
CDS CCA 72 bp TGGGCGACTGGGACATGTGGAAGGGTTCAGATTAGTTaGAACCAACTGATTCACGTGAATCCCAACCTAGAA +
Preference number: 6 (lower is better)
Translates to: WATGTCGRVQIS*NQLIHVNPNLE
Trigger: TTCTAGGTTGGGATTCACGTGAATCAGTTGGTTCCAACTAATCTGAACCCTTCCACATGTCCCAGTCGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472000.1
CDS TCA 72 bp ACTGGAGGGCAAAGTAGAGAACTGCTCATCAAAACTTaGCAAACTAGACGGGCACATGGAGAATGTGGAGGA +
Preference number: 6 (lower is better)
Translates to: TGGQSRELLIKT*QTRRAHGECGG
Trigger: TCCTCCACATTCTCCATGTGCCCGTCTAGTTTGTCAAGTTTTGATGAGCAGTTCTCTACTTTGCCCTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486117.1
CDS CAA 90 bp TCTGAAATTGTAGTTATCCATTCTCTGAGCAAGGTCTTCACATCATaGAATTCAACAGCTCCAGCTAGATTGGGTGCTGGAGGTCTCACA +
Preference number: 6 (lower is better)
Translates to: SEIVVIHSLSKVFTS*NSTAPARLGAGGLT
Trigger: TGTGAGACCTCCAGCACCCAATCTAGCTGGAGCTGTTGAATTCAATGATGTGAAGACCTTGCTCAGAGAATGGATAACTACAATTTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258428.8
ENST00000393445.7
CDS CCA 72 bp TCCTCTATTATCAGTCTCATCCTTAGCCTGTTCGTCTaGTCCTCTAAGATACACAAATCCTGTGTCAGTTAC +
Preference number: 6 (lower is better)
Translates to: SSIISLILSLFV*SSKIHKSCVSY
Trigger: GTAACTGACACAGGATTTGTGTATCTTAGAGGACCAGACGAACAGGCTAAGGATGAGACTGATAATAGAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482887.1
CDS CAA 90 bp AATGGCAATGGCCCAAAGTACAGGCTCTCCAATTCTCTCTTTGCTTaGCCACTTACTAATTTGACCTTTGGCATGTTGCTCATCTATGAT +
Preference number: 6 (lower is better)
Translates to: NGNGPKYRLSNSLFA*PLTNLTFGMLLIYD
Trigger: ATCATAGATGAGCAACATGCCAAAGGTCAAATTAGTAAGTGGCAAAGCAAAGAGAGAATTGGAGAGCCTGTACTTTGGGCCATTGCCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465086.1
CDS TCA 72 bp ATGCCCAATACAGATCCTGCCTACATTAGTCTTCGATaGCATATCCTTCAGCTGAAGATGAATATTCTTCCC +
Preference number: 6 (lower is better)
Translates to: MPNTDPAYISLR*HILQLKMNILP
Trigger: GGGAAGAATATTCATCTTCAGCTGAAGGATATGTCATCGAAGACTAATGTAGGCAGGATCTGTATTGGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491752.1
CDS GCA 72 bp ACTCCACTAAAAATTGTAGATGAAGTCCCATCCTTCTaGATAGCAGCATCTGATCGAAACTGTTCCTCCAAT +
Preference number: 6 (lower is better)
Translates to: TPLKIVDEVPSF*IAASDRNCSSN
Trigger: ATTGGAGGAACAGTTTCGATCAGATGCTGCTATGCAGAAGGATGGGACTTCATCTACAATTTTTAGTGGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258428.8
ENST00000393445.7
ENST00000413697.5
ENST00000473819.1
CDS TCA 72 bp TCTCCAATTCTCTCTTTGCTTTGCCACTTACTAATTTaGCCTTTGGCATGTTGCTCATCTATGATGGGTAGT +
Preference number: 6 (lower is better)
Translates to: SPILSLLCHLLI*PLACCSSMMGS
Trigger: ACTACCCATCATAGATGAGCAACATGCCAAAGGTCAAATTAGTAAGTGGCAAAGCAAAGAGAGAATTGGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465086.1
CDS CAA 72 bp CTTTCACTGCTGCCTTTAGATGAAGTAAAGGATTCTTaGGCACTAAGAGCAGATGGATATAAGATCCTCAAC +
Preference number: 6 (lower is better)
Translates to: LSLLPLDEVKDS*ALRADGYKILN
Trigger: GTTGAGGATCTTATATCCATCTGCTCTTAGTGCCAAAGAATCCTTTACTTCATCTAAAGGCAGCAGTGAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465086.1
CDS TCA 72 bp TGGATGAAGTTAAGAGGGCTCTTTGAAGTTCACTTCTaGAAGCTCTTACATATTCTTCAGTGTGAAGTGAAG +
Preference number: 6 (lower is better)
Translates to: WMKLRGLFEVHF*KLLHILQCEVK
Trigger: CTTCACTTCACACTGAAGAATATGTAAGAGCTTTCAGAAGTGAACTTCAAAGAGCCCTCTTAACTTCATCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413697.5
CDS CAA 72 bp GTGCCAACTATGTCATTAAAATACCAGGTTTGGCTCTaGTATCTGAAGCTTTCTCCTAAAACTCATACCTCT +
Preference number: 6 (lower is better)
Translates to: VPTMSLKYQVWL*YLKLSPKTHTS
Trigger: AGAGGTATGAGTTTTAGGAGAAAGCTTCAGATACAAGAGCCAAACCTGGTATTTTAATGACATAGTTGGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481719.1
CDS CCA 72 bp GCAGATGGATATAAGATCCTCAACAAAATGATAGTATaGATAGTCTGGATGACAGTATTGGGTTCTCTTTTC +
Preference number: 6 (lower is better)
Translates to: ADGYKILNKMIV*IVWMTVLGSLF
Trigger: GAAAAGAGAACCCAATACTGTCATCCAGACTATCCATACTATCATTTTGTTGAGGATCTTATATCCATCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465086.1
CDS CCA 72 bp AATCCATATCAACATGCATTATACAGCTCTGATGTCTaGGAGAATTCAATACTGACATATCTCCTAAGGACA +
Preference number: 6 (lower is better)
Translates to: NPYQHALYSSDV*ENSILTYLLRT
Trigger: TGTCCTTAGGAGATATGTCAGTATTGAATTCTCCCAGACATCAGAGCTGTATAATGCATGTTGATATGGATT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482887.1
CDS CAA 72 bp TCAGTTTTCTTAAAACATAAGCAAGAATACAGACCTTaGAGATCTGGTCTATTTCGTATACCCACTGATACA +
Preference number: 6 (lower is better)
Translates to: SVFLKHKQEYRP*RSGLFRIPTDT
Trigger: TGTATCAGTGGGTATACGAAATAGACCAGATCTCAAAGGTCTGTATTCTTGCTTATGTTTTAAGAAAACTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491752.1