RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RETREG3 (Homo sapiens)

Ensembl gene IDs: ENSG00000141699

Ensembl transcript IDs: ENST00000309428.10, ENST00000585726.5, ENST00000585894.5, ENST00000586796.1, ENST00000586870.5, ENST00000588423.1, ENST00000589007.5, ENST00000589797.5, ENST00000590035.5, ENST00000590541.1, ENST00000591547.5, ENST00000593251.5

Found 498 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGAGCTCCGGCAGCGCAGCCTCGTCCCGGCTGGCAGGTGGGGCCTaGGGCTCCTCAGCCCCTGGCGGAGAACGGTACATCAAGCTGGGC +
Preference number: 1 (lower is better)
Translates to: RSSGSAASSRLAGGA*GSSAPGGERYIKLG
Trigger: GCCCAGCTTGATGTACCGTTCTCCGCCAGGGGCTGAGGAGCCCCAGGCCCCACCTGCCAGCCGGGACGAGGCTGCGCTGCCGGAGCTCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR TCA 90 bp GGACGCAGCTTTGTCGGGCTCAAAAGAGGAGCCCTCGCTCACTCTTaGGCGGCTCAAGATGTTACCAGAAGCTCCCGCCAGATGTGCGGG +
Preference number: 1 (lower is better)
Translates to: GRSFVGLKRGALAHS*AAQDVTRSSRQMCG
Trigger: CCCGCACATCTGGCGGGAGCTTCTGGTAACATCTTGAGCCGCTCAAGAGTGAGCGAGGGCTCCTCTTTTGAGCCCGACAAAGCTGCGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR TCA 90 bp GAACTAGGGTGCCGAAGCCTGCAGGCGGGATGGAGTGGAAGGAGGTaGGGCAAAATTAGGCAAGTACAGGAAGGAGCCAGTGCAGCGAAG +
Preference number: 1 (lower is better)
Translates to: ELGCRSLQAGWSGRR*GKIRQVQEGASAAK
Trigger: CTTCGCTGCACTGGCTCCTTCCTGTACTTGCCTAATTTTGCCTCACCTCCTTCCACTCCATCCCGCCTGCAGGCTTCGGCACCCTAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR CCA 90 bp GACAGAAGGCAGCAAGCTCCTCTTCGCTGTCACTGTGGTTGTCCATaGCTCGTTCTGGGTGGAGAGCTCTGCGGCGTAATTGTCTCTCTC +
Preference number: 1 (lower is better)
Translates to: DRRQQAPLRCHCGCP*LVLGGELCGVIVSL
Trigger: GAGAGAGACAATTACGCCGCAGAGCTCTCCACCCAGAACGAGCCATGGACAACCACAGTGACAGCGAAGAGGAGCTTGCTGCCTTCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR CCA 90 bp TGCAGAGCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTaGTACACAGCAAGGGGCCACATCATGACAGTGACAAGCATCAAG +
Preference number: 1 (lower is better)
Translates to: CRAGFSRTYARSHSR*YTARGHIMTVTSIK
Trigger: CTTGATGCTTGTCACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
3UTR CCA 90 bp TTCCTTATGAAAATGGTCCCACTAACCCAGACTTCAGCTACATGGTaGCAGAGCTCGGGCACGCTGAGCAACCGAGGGTGCACAAAGCCC +
Preference number: 1 (lower is better)
Translates to: FLMKMVPLTQTSATW*QSSGTLSNRGCTKP
Trigger: GGGCTTTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCTGGGTTAGTGGGACCATTTTCATAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR TCA 90 bp GTAATTGTCTCTCTCTCTGCTTGGACATCATGTAGCCACGGACACTaGAGTCTAGCCGCTGCAGAGCTGGCTTCAGCCGCACATATGCTC +
Preference number: 1 (lower is better)
Translates to: VIVSLSAWTSCSHGH*SLAAAELASAAHML
Trigger: GAGCATATGTGCGGCTGAAGCCAGCTCTGCAGCGGCTAGACTTCAGTGTCCGTGGCTACATGATGTCCAAGCAGAGAGAGAGACAATTAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR CCA 90 bp ACATTCCTTATGAAAATGGTCCCACTAACCCAGACTTCAGCTACATaGTGGCAGAGCTCGGGCACGCTGAGCAACCGAGGGTGCACAAAG +
Preference number: 1 (lower is better)
Translates to: TFLMKMVPLTQTSAT*WQSSGTLSNRGCTK
Trigger: CTTTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCTGGGTTAGTGGGACCATTTTCATAAGGAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR CCA 90 bp CTCATCATCCAGGCCAGCAGGATCCATATTAATGGAAGGGAAGTCTaGAAGGTCTCTGGCAAAGGATTCCTCTGGATCACTGTGACCATC +
Preference number: 1 (lower is better)
Translates to: LIIQASRIHINGREV*KVSGKGFLWITVTI
Trigger: GATGGTCACAGTGATCCAGAGGAATCCTTTGCCAGAGACCTTCCAGACTTCCCTTCCATTAATATGGATCCTGCTGGCCTGGATGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR GCA 90 bp AGATTGAATGTGCCATTGTCTGTACAGGAGACTTCAGCGTCTGAGTaGTCAGAGTCTGTGATGGCCAATTCCCTGGCAACAGTAGAATCG +
Preference number: 1 (lower is better)
Translates to: RLNVPLSVQETSASE*SESVMANSLATVES
Trigger: CGATTCTACTGTTGCCAGGGAATTGGCCATCACAGACTCTGAGCACTCAGACGCTGAAGTCTCCTGTACAGACAATGGCACATTCAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR GCA 90 bp GAGATTATGGCCCCTGGGATGAATGACATGGAGCCATTTGTAAAGTaGTACTGTATCATCCCCCATGAATTATTGCTTCTCCAAAGGAGG +
Preference number: 1 (lower is better)
Translates to: EIMAPGMNDMEPFVK*YCIIPHELLLLQRR
Trigger: CCTCCTTTGGAGAAGCAATAATTCATGGGGGATGATACAGTAGCACTTTACAAATGGCTCCATGTCATTCATCCCAGGGGCCATAATCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR TCA 90 bp TTATTTCAGGCCAGATTTTGTTCTTCCATTGATCAATACACACAATaGTCATCAAGCCAAATGCAAGTAAAAACACAAGACGAAGAGATG +
Preference number: 1 (lower is better)
Translates to: LFQARFCSSIDQYTQ*SSSQMQVKTQDEEM
Trigger: CATCTCTTCGTCTTGTGTTTTTACTTGCATTTGGCTTGATGATCATTGTGTGTATTGATCAATGGAAGAACAAAATCTGGCCTGAAATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR TCA 90 bp GGGGGACCGGAGGAAGCCTCTCGTTGCTCTCTGGGCAGGTGCTCCAGAAGGGCCCATGGGCTCTTTCAGTaGGGGCCCCTGAGCACTCAT +
Preference number: 2 (lower is better)
Translates to: GGPEEASRCSLGRCSRRAHGLFQ*GPLSTH
Trigger: ATGAGTGCTCAGGGGCCCTCACTGAAAGAGCCCATG...GGCCCTTCTGGAGCACCTGCCCAGAGAGCAACGAGAGGCTTCCTCCGGTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR CCA 90 bp GGGGGACCGGAGGAAGCCTCTCGTTGCTCTCTGGGCAGGTGCTCCAGAAGGGCCCAGACTTCAGCTACATaGTGGCAGAGCTCGGGCACG +
Preference number: 2 (lower is better)
Translates to: GGPEEASRCSLGRCSRRAQTSAT*WQSSGT
Trigger: CGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCTG...GGCCCTTCTGGAGCACCTGCCCAGAGAGCAACGAGAGGCTTCCTCCGGTCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR TCA 90 bp GGATCCTACAGGAAGAGCACCAAGCAGGAGCTCCGGCAGCGCAGCCTCGTCCCGTGTAGCCACGGACACTaGAGTCTAGCCGCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: GSYRKSTKQELRQRSLVPCSHGH*SLAAAE
Trigger: CTCTGCAGCGGCTAGACTTCAGTGTCCGTGGCTACA...CGGGACGAGGCTGCGCTGCCGGAGCTCCTGCTTGGTGCTCTTCCTGTAGGATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR CCA 90 bp AAGCGCACACTCATGCAAACACACGAAATCCCCCTCCTTCCCCACACCTCCTGTCAGCCTCGTCCCGGCTaGCAGGTGGGGCCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: KRTLMQTHEIPLLPHTSCQPRPG*QVGPGA
Trigger: AGCCCCAGGCCCCACCTGCCAGCCGGGACGAGGCTG...ACAGGAGGTGTGGGGAAGGAGGGGGATTTCGTGTGTTTGCATGAGTGTGCGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR GCA 90 bp CCCACTACTAAGGAGGCTGAGGCAGGAGAACCTCTTCAACCTGGAAGGCAGACGCCGGCAGGCGGAGGCTaGAGTGAGCCGAGATTGTGC +
Preference number: 2 (lower is better)
Translates to: PTTKEAEAGEPLQPGRQTPAGGG*SEPRLC
Trigger: GCACAATCTCGGCTCACTGCAGCCTCCGCCTGCCGG...CGTCTGCCTTCCAGGTTGAAGAGGTTCTCCTGCCTCAGCCTCCTTAGTAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR CAA 90 bp GGGACGCAGCTTTGTCGGGCTCAAAAGAGGAGCCCTCGCTCACTCTaGAGCGGCTCAAGATGTTACCAGAAGCTCCCGCCAGATGTGCGG +
Preference number: 2 (lower is better)
Translates to: GTQLCRAQKRSPRSL*SGSRCYQKLPPDVR
Trigger: CCGCACATCTGGCGGGAGCTTCTGGTAACATCTTGAGCCGCTCAAGAGTGAGCGAGGGCTCCTCTTTTGAGCCCGACAAAGCTGCGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR TCA 90 bp CCTACAGGAAGAGCACCAAGCAGGAGCTCCGGCAGCGCAGCCTCGTCCCGGCTGGGCCCCTTGAAAGATTaGATGTGCCATTGTCTGTAC +
Preference number: 2 (lower is better)
Translates to: PTGRAPSRSSGSAASSRLGPLKD*MCHCLY
Trigger: GTACAGACAATGGCACATTCAATCTTTCAAGGGGCC...CAGCCGGGACGAGGCTGCGCTGCCGGAGCTCCTGCTTGGTGCTCTTCCTGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR CCA 90 bp CAGCATCAGTGTCCAGGTCTGAACTGGGGGACCGGAGGAAGCCTCTCGTTGCTCGTAAGGCAGAGAAGATaGGTGGACGGCCCTGGGAAG +
Preference number: 2 (lower is better)
Translates to: QHQCPGLNWGTGGSLSLLVRQRR*VDGPGK
Trigger: CTTCCCAGGGCCGTCCACCCATCTTCTCTGCCTTAC...GAGCAACGAGAGGCTTCCTCCGGTCCCCCAGTTCAGACCTGGACACTGATGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR TCA 90 bp CTGAAGCGCACACTCATGCAAACACACGAAATCCCCCTCCTTCCCCACACCTCCCTGGTGGGAGGGGAGTaGGTGTCCTCTCTAAGGAGG +
Preference number: 2 (lower is better)
Translates to: LKRTLMQTHEIPLLPHTSLVGGE*VSSLRR
Trigger: CCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAG...GGAGGTGTGGGGAAGGAGGGGGATTTCGTGTGTTTGCATGAGTGTGCGCTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR CCA 90 bp CACAGTGACTCCCAAAAGGAGTCTCTGCCTCAGTGGCTCCTAGAACTGGCAGGGGGGCTCCTCAGCCCCTaGCGGAGAACGGTACATCAA +
Preference number: 2 (lower is better)
Translates to: HSDSQKESLPQWLLELAGGLLSP*RRTVHQ
Trigger: TTGATGTACCGTTCTCCGCCAGGGGCTGAGGAGCCC...CCCTGCCAGTTCTAGGAGCCACTGAGGCAGAGACTCCTTTTGGGAGTCACTGTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR TCA 90 bp TGCAGAGCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACATGTAGCCACGGACACTaGAGTCTAGCCGCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: CRAGFSRTYARSHSRWYTCSHGH*SLAAAE
Trigger: CTCTGCAGCGGCTAGACTTCAGTGTCCGTGGCTACA...TGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR TCA 90 bp CCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATCAGGGAGACTTCAGCGTCTaGGTGCTCAGAGTCTGTGAT +
Preference number: 2 (lower is better)
Translates to: PAGGRGVSVLSKEASEHQGDFSV*VLRVCD
Trigger: ATCACAGACTCTGAGCACTCAGACGCTGAAGTCTCC...CTGATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR GCA 90 bp CAGCATCAGTGTCCAGGTCTGAACTGGGGGACCGGAGGAAGCCTCTCGTTGCTCGCTGAGTTCTTCCCTTaGCCCATCACCTTAAGTGGG +
Preference number: 2 (lower is better)
Translates to: QHQCPGLNWGTGGSLSLLAEFFP*PITLSG
Trigger: CCCACTTAAGGTGATGGGGCAAGGGAAGAACTCAGC...GAGCAACGAGAGGCTTCCTCCGGTCCCCCAGTTCAGACCTGGACACTGATGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR CCA 90 bp TGGCGGAGAACGGTACATCAAGCTGGGCATGCCAATGCTAGTGTCGTCCTCATCGGAGGAAGGCAGGCATaGGCTCTTTCAGTGAGGGCC +
Preference number: 2 (lower is better)
Translates to: WRRTVHQAGHANASVVLIGGRQA*ALSVRA
Trigger: GGCCCTCACTGAAAGAGCCCATGCCTGCCTTCCTCC...GATGAGGACGACACTAGCATTGGCATGCCCAGCTTGATGTACCGTTCTCCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR CCA 90 bp CTGGCAAGGTTGCTGGTGAGGTTGGATCCTACAGGAAGAGCACCAAGCAGGAGCACTTCAGCTACATGGTaGCAGAGCTCGGGCACGCTG +
Preference number: 2 (lower is better)
Translates to: LARLLVRLDPTGRAPSRSTSATW*QSSGTL
Trigger: CAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGT...GCTCCTGCTTGGTGCTCTTCCTGTAGGATCCAACCTCACCAGCAACCTTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR TCA 90 bp CTGAAGCGCACACTCATGCAAACACACGAAATCCCCCTCCTTCCCCACACCTCCGGCAGTCAGCTCACTTaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: LKRTLMQTHEIPLLPHTSGSQLT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAAGTGAGCTGACTGCC...GGAGGTGTGGGGAAGGAGGGGGATTTCGTGTGTTTGCATGAGTGTGCGCTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR TCA 90 bp TGGCGGAGAACGGTACATCAAGCTGGGCATGCCAATGCTAGTGTCGTCCTCATCTGTAGCCACGGACACTaGAGTCTAGCCGCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: WRRTVHQAGHANASVVLICSHGH*SLAAAE
Trigger: CTCTGCAGCGGCTAGACTTCAGTGTCCGTGGCTACA...GATGAGGACGACACTAGCATTGGCATGCCCAGCTTGATGTACCGTTCTCCGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR GCA 90 bp CCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATCAGCTGGAAGGCAGACGTTaGAGAAAGCCAAGATCACAC +
Preference number: 2 (lower is better)
Translates to: PAGGRGVSVLSKEASEHQLEGRR*RKPRSH
Trigger: GTGTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAG...CTGATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR GCA 90 bp GGCAGGATCCCTCAGGTACAAGAAACACCTTCCGAAGATTTTGCTCTCCTTCCTCCGGCAGGCGGAGGCTaGAGTGAGCCGAGATTGTGC +
Preference number: 2 (lower is better)
Translates to: GRIPQVQETPSEDFALLPPAGGG*SEPRLC
Trigger: GCACAATCTCGGCTCACTGCAGCCTCCGCCTGCCGG...AGGAAGGAGAGCAAAATCTTCGGAAGGTGTTTCTTGTACCTGAGGGATCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR GCA 90 bp CGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGCTTCAGCCGCACATATaGTCGATCCCACAGTCGGTG +
Preference number: 2 (lower is better)
Translates to: RTYARSHSRWYTARGHIMLQPHI*SIPQSV
Trigger: CACCGACTGTGGGATCGAGCATATGTGCGGCTGAAG...CATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR CCA 90 bp CCCACTACTAAGGAGGCTGAGGCAGGAGAACCTCTTCAACCTGGAAGGCAGACGGGCTTGAGCTCTGCTTaGGGAGGCAGAGGCTATAGA +
Preference number: 2 (lower is better)
Translates to: PTTKEAEAGEPLQPGRQTGLSSA*GGRGYR
Trigger: TCTATAGCCTCTGCCTCCCCAAGCAGAGCTCAAGCC...CGTCTGCCTTCCAGGTTGAAGAGGTTCTCCTGCCTCAGCCTCCTTAGTAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR CCA 90 bp ATCCAGGCCAGCAGGATCCATATTAATGGAAGGGAAGTCTGGAAGGTCTCTGGCGTCCATGGCTCGTTCTaGGTGGAGAGCTCTGCGGCG +
Preference number: 2 (lower is better)
Translates to: IQASRIHINGREVWKVSGVHGSF*VESSAA
Trigger: CGCCGCAGAGCTCTCCACCCAGAACGAGCCATGGAC...GCCAGAGACCTTCCAGACTTCCCTTCCATTAATATGGATCCTGCTGGCCTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR TCA 90 bp CCCACTACTAAGGAGGCTGAGGCAGGAGAACCTCTTCAACCTGGAAGGCAGACGCCCACCTGCAGTACATaGAAACAGGCTCTGTCCAAC +
Preference number: 2 (lower is better)
Translates to: PTTKEAEAGEPLQPGRQTPTCST*KQALSN
Trigger: GTTGGACAGAGCCTGTTTTCATGTACTGCAGGTGGG...CGTCTGCCTTCCAGGTTGAAGAGGTTCTCCTGCCTCAGCCTCCTTAGTAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR TCA 90 bp GGCAGGAGAACCTCTTCAACCTGGAAGGCAGACGTTGCAGAAAGCCAAGATCACTGGTTGGGAGGCCCCTaGCAAGGCCAGCTGAATCAT +
Preference number: 2 (lower is better)
Translates to: GRRTSSTWKADVAESQDHWLGGP*QGQLNH
Trigger: ATGATTCAGCTGGCCTTGTCAGGGGCCTCCCAACCA...GTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTTGAAGAGGTTCTCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR GCA 90 bp CTGGCAAGGTTGCTGGTGAGGTTGGATCCTACAGGAAGAGCACCAAGCAGGAGCGCTGAGTTCTTCCCTTaGCCCATCACCTTAAGTGGG +
Preference number: 2 (lower is better)
Translates to: LARLLVRLDPTGRAPSRSAEFFP*PITLSG
Trigger: CCCACTTAAGGTGATGGGGCAAGGGAAGAACTCAGC...GCTCCTGCTTGGTGCTCTTCCTGTAGGATCCAACCTCACCAGCAACCTTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR GCA 90 bp TCCAGGCCAGCAGGATCCATATTAATGGAAGGGAAGTCTGGAAGGTCTCTGGCACTGAAGTCTAGCCGCTaGAGAGCTGGCTTCAGCCGC +
Preference number: 2 (lower is better)
Translates to: SRPAGSILMEGKSGRSLALKSSR*RAGFSR
Trigger: GCGGCTGAAGCCAGCTCTGCAGCGGCTAGACTTCAG...TGCCAGAGACCTTCCAGACTTCCCTTCCATTAATATGGATCCTGCTGGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR TCA 90 bp CTCAGACCTCAAAATACAGAGGTGCTCACTAATCCTCCCAGCCAGCTGATCCCCGCTCTAGAGAGGCGATaGAAGGAGGAAGGCAGGCAT +
Preference number: 2 (lower is better)
Translates to: LRPQNTEVLTNPPSQLIPALERR*KEEGRH
Trigger: ATGCCTGCCTTCCTCCTTTCATCGCCTCTCTAGAGC...GGGGATCAGCTGGCTGGGAGGATTAGTGAGCACCTCTGTATTTTGAGGTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR TCA 90 bp CCAGATGGACCCAGGGGTTATCAGAAACCGAAGATTAACTACACAGCTCCAGAAAGGCGGAGGCTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: PDGPRGYQKPKINYTAPERRRLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCAGCCTCCGCCT...TTCTGGAGCTGTGTAGTTAATCTTCGGTTTCTGATAACCCCTGGGTCCATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR GCA 90 bp ATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGACAGTCTTCAGCCGCACATATaGTCGATCCCACAGTCGGTG +
Preference number: 2 (lower is better)
Translates to: ICSIPQSVVHSKGPHHDSLQPHI*SIPQSV
Trigger: CACCGACTGTGGGATCGAGCATATGTGCGGCTGAAG...ACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR CCA 90 bp CTAAGGAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGGAGGAAGGCAGGCATaGGCTCTTTCAGTGAGGGCC +
Preference number: 2 (lower is better)
Translates to: LRRPLSISQATQHTNIIQGGRQA*ALSVRA
Trigger: GGCCCTCACTGAAAGAGCCCATGCCTGCCTTCCTCC...CTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTCCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
3UTR-3UTR CCA 90 bp CACCCCTCCCCTCCTCAGTTCACAGTGGAGACTATGGAGATTCAGGGCAGGATCTCACAAGCAATACTTTaGACCACTGGGGTTCAGGCC +
Preference number: 2 (lower is better)
Translates to: HPSPPQFTVETMEIQGRISQAIL*TTGVQA
Trigger: GGCCTGAACCCCAGTGGTCCAAAGTATTGCTTGTGA...GATCCTGCCCTGAATCTCCATAGTCTCCACTGTGAACTGAGGAGGGGAGGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR CCA 90 bp CTGGCAAGGTTGCTGGTGAGGTTGGATCCTACAGGAAGAGCACCAAGCAGGAGCGTCTCTCTCTCTGCTTaGACATCATGTAGCCACGGA +
Preference number: 2 (lower is better)
Translates to: LARLLVRLDPTGRAPSRSVSLSA*TSCSHG
Trigger: TCCGTGGCTACATGATGTCCAAGCAGAGAGAGAGAC...GCTCCTGCTTGGTGCTCTTCCTGTAGGATCCAACCTCACCAGCAACCTTGCCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR CCA 90 bp GGCAGGAGAACCTCTTCAACCTGGAAGGCAGACGTTGCAGAAAGCCAAGATCACGCAGGCGGGATGGAGTaGAAGGAGGTGAGGCAAAAT +
Preference number: 2 (lower is better)
Translates to: GRRTSSTWKADVAESQDHAGGME*KEVRQN
Trigger: ATTTTGCCTCACCTCCTTCCACTCCATCCCGCCTGC...GTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTTGAAGAGGTTCTCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR TCA 90 bp GGAGACCAGGCTGGCAAGGTTGCTGGTGAGGTTGGATCCTACAGGAAGAGCACCAAACCTAAACCACAGTaGCTCCCAAAAGGAGTCTCT +
Preference number: 2 (lower is better)
Translates to: GDQAGKVAGEVGSYRKSTKPKPQ*LPKGVS
Trigger: AGAGACTCCTTTTGGGAGTCACTGTGGTTTAGGTTT...GGTGCTCTTCCTGTAGGATCCAACCTCACCAGCAACCTTGCCAGCCTGGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR TCA 90 bp CTGAGGCAGGAGAACCTCTTCAACCTGGAAGGCAGACGTTGCAGAAAGCCAAGATTCAGTGAGGGCCCCTaGGCACTCATACCTAAAAGC +
Preference number: 2 (lower is better)
Translates to: LRQENLFNLEGRRCRKPRFSEGP*ALIPKS
Trigger: GCTTTTAGGTATGAGTGCTCAGGGGCCCTCACTGAA...TCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTTGAAGAGGTTCTCCTGCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR TCA 90 bp TCCAGGCCAGCAGGATCCATATTAATGGAAGGGAAGTCTGGAAGGTCTCTGGCAGCCTGGCCAGCACGGTaGAACCCCATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: SRPAGSILMEGKSGRSLAAWPAR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCGTGCTGGCCAGGC...TGCCAGAGACCTTCCAGACTTCCCTTCCATTAATATGGATCCTGCTGGCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR TCA 90 bp AAGCGCACACTCATGCAAACACACGAAATCCCCCTCCTTCCCCACACCTCCTGTTTATGGCCCCTGGGATaGATGACATGGAGCCATTTG +
Preference number: 2 (lower is better)
Translates to: KRTLMQTHEIPLLPHTSCLWPLG*MTWSHL
Trigger: CAAATGGCTCCATGTCATTCATCCCAGGGGCCATAA...ACAGGAGGTGTGGGGAAGGAGGGGGATTTCGTGTGTTTGCATGAGTGTGCGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR GCA 90 bp GAACGGTACATCAAGCTGGGCATGCCAATGCTAGTGTCGTCCTCATCATCCAGGCTGAGCAACCGAGGGTaGACAAAGCCCCAGCTTTTA +
Preference number: 2 (lower is better)
Translates to: ERYIKLGMPMLVSSSSSRLSNRG*TKPQLL
Trigger: TAAAAGCTGGGGCTTTGTGCACCCTCGGTTGCTCAG...CCTGGATGATGAGGACGACACTAGCATTGGCATGCCCAGCTTGATGTACCGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR CCA 90 bp CAGCACACCCCTCCCCTCCTCAGTTCACAGTGGAGACTATGGAGATTCAGGGCAAATACTTTGGACCACTaGGGTTCAGGCCCCAAGAAA +
Preference number: 2 (lower is better)
Translates to: QHTPPLLSSQWRLWRFRANTLDH*GSGPKK
Trigger: TTTCTTGGGGCCTGAACCCCAGTGGTCCAAAGTATT...TGCCCTGAATCTCCATAGTCTCCACTGTGAACTGAGGAGGGGAGGGGTGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR CCA 90 bp TCAGTTCACAGTGGAGACTATGGAGATTCAGGGCAGGATCCCTCAGGTACAAGAGGCAGAGAAGATGGGTaGACGGCCCTGGGAAGAACT +
Preference number: 2 (lower is better)
Translates to: SVHSGDYGDSGQDPSGTRGREDG*TALGRT
Trigger: AGTTCTTCCCAGGGCCGTCCACCCATCTTCTCTGCC...TCTTGTACCTGAGGGATCCTGCCCTGAATCTCCATAGTCTCCACTGTGAACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR CCA 90 bp ATCCAGGCCAGCAGGATCCATATTAATGGAAGGGAAGTCTGGAAGGTCTCTGGCCACTGTGGTTGTCCATaGCTCGTTCTGGGTGGAGAG +
Preference number: 2 (lower is better)
Translates to: IQASRIHINGREVWKVSGHCGCP*LVLGGE
Trigger: CTCTCCACCCAGAACGAGCCATGGACAACCACAGTG...GCCAGAGACCTTCCAGACTTCCCTTCCATTAATATGGATCCTGCTGGCCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR TCA 90 bp GGAGAGAAGCCTCCCTTGGGGGAGCACACTCTCACTTCAGTGACTGAGCTCAGAAAACCTAAACCACAGTaGCTCCCAAAAGGAGTCTCT +
Preference number: 2 (lower is better)
Translates to: GEKPPLGEHTLTSVTELRKPKPQ*LPKGVS
Trigger: AGAGACTCCTTTTGGGAGTCACTGTGGTTTAGGTTT...TCTGAGCTCAGTCACTGAAGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
3UTR-3UTR TCA 90 bp GGCAGGAGAACCTCTTCAACCTGGAAGGCAGACGTTGCAGAAAGCCAAGATCACTCTCACTTCAGTGACTaGGCTCAGAAATGGGCATCC +
Preference number: 2 (lower is better)
Translates to: GRRTSSTWKADVAESQDHSHFSD*AQKWAS
Trigger: GGATGCCCATTTCTGAGCTCAGTCACTGAAGTGAGA...GTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTTGAAGAGGTTCTCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR TCA 90 bp CTAAGGAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGCCTGGCCAGCACGGTaGAACCCCATCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: LRRPLSISQATQHTNIIQAWPAR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCGTGCTGGCCAGGC...CTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR TCA 90 bp TCAGTTCACAGTGGAGACTATGGAGATTCAGGGCAGGATCCCTCAGGTACAAGACCAACTCCCAAGGCCTaGAGCGCACACTCATGCAAA +
Preference number: 2 (lower is better)
Translates to: SVHSGDYGDSGQDPSGTRPTPKA*SAHSCK
Trigger: TTTGCATGAGTGTGCGCTTCAGGCCTTGGGAGTTGG...TCTTGTACCTGAGGGATCCTGCCCTGAATCTCCATAGTCTCCACTGTGAACTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR TCA 90 bp CCAGATGGACCCAGGGGTTATCAGAAACCGAAGATTAACTACACAGCTCCAGAAGCCCTCGCTCACTCTTaGGCGGCTCAAGATGTTACC +
Preference number: 2 (lower is better)
Translates to: PDGPRGYQKPKINYTAPEALAHS*AAQDVT
Trigger: GGTAACATCTTGAGCCGCTCAAGAGTGAGCGAGGGC...TTCTGGAGCTGTGTAGTTAATCTTCGGTTTCTGATAACCCCTGGGTCCATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR GCA 90 bp CACCCCTCCCCTCCTCAGTTCACAGTGGAGACTATGGAGATTCAGGGCAGGATCAGTATGGTATTGCTTTaGTCACTGCTGAGGCTGATG +
Preference number: 2 (lower is better)
Translates to: HPSPPQFTVETMEIQGRISMVLL*SLLRLM
Trigger: CATCAGCCTCAGCAGTGAGCAAAGCAATACCATACT...GATCCTGCCCTGAATCTCCATAGTCTCCACTGTGAACTGAGGAGGGGAGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR GCA 90 bp CACAGTGACTCCCAAAAGGAGTCTCTGCCTCAGTGGCTCCTAGAACTGGCAGGGAGTAAGAATAGGTGGTaGAAGAGATTATGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: HSDSQKESLPQWLLELAGSKNRW*KRLWPL
Trigger: CAGGGGCCATAATCTCTTGCACCACCTATTCTTACT...CCCTGCCAGTTCTAGGAGCCACTGAGGCAGAGACTCCTTTTGGGAGTCACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR CCA 90 bp GGAGCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATTATGGCCCCTGGGATGAGAGAAGCCTCCCTTaGGGGAGCACACTCTCACTT +
Preference number: 2 (lower is better)
Translates to: GAEQEVRIGGARDYGPWDERSLP*GSTLSL
Trigger: AAGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTCTC...ATCCCAGGGGCCATAATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR GCA 90 bp CTAAGGAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGTGTAACTACTCCAGCTaGTGCCTGACTTTGGGGGCT +
Preference number: 2 (lower is better)
Translates to: LRRPLSISQATQHTNIIQCNYSS*CLTLGA
Trigger: AGCCCCCAAAGTCAGGCAGCAGCTGGAGTAGTTACA...CTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTCCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
3UTR-3UTR GCA 90 bp AAGCGCACACTCATGCAAACACACGAAATCCCCCTCCTTCCCCACACCTCCTGTAGTAAGAATAGGTGGTaGAAGAGATTATGGCCCCTG +
Preference number: 2 (lower is better)
Translates to: KRTLMQTHEIPLLPHTSCSKNRW*KRLWPL
Trigger: CAGGGGCCATAATCTCTTGCACCACCTATTCTTACT...ACAGGAGGTGTGGGGAAGGAGGGGGATTTCGTGTGTTTGCATGAGTGTGCGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR CCA 90 bp GGCAGGATCCCTCAGGTACAAGAAACACCTTCCGAAGATTTTGCTCTCCTTCCTAGGCTGATGGCCAGATaGACCCAGGGGTTATCAGAA +
Preference number: 2 (lower is better)
Translates to: GRIPQVQETPSEDFALLPRLMAR*TQGLSE
Trigger: TTCTGATAACCCCTGGGTCCATCTGGCCATCAGCCT...AGGAAGGAGAGCAAAATCTTCGGAAGGTGTTTCTTGTACCTGAGGGATCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR CAA 90 bp AAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTATTTaGTTCCCCCAAAGTACCATCCTGATGGAGAGAAGCCTCCCTTGG +
Preference number: 2 (lower is better)
Translates to: KQQHLLKGEPISLTI*FPQSTILMERSLPW
Trigger: CCAAGGGAGGCTTCTCTCCATCAGGATGGTACTTTGGGGGAACAAAATAGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
3UTR CAA 90 bp CCTTCCGTTAGAGGTGTTTGGCCCCTTGAAAGATTGAATGTGCCATaGTCTGTACAGGAGACTTCAGCGTCTGAGTGCTCAGAGTCTGTG +
Preference number: 2 (lower is better)
Translates to: PSVRGVWPLERLNVP*SVQETSASECSESV
Trigger: CACAGACTCTGAGCACTCAGACGCTGAAGTCTCCTGTACAGACAATGGCACATTCAATCTTTCAAGGGGCCAAACACCTCTAACGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR GCA 90 bp GCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATTATGGCCCCTGGGATGAAGCTGAGTTCTTCCCTTaGCCCATCACCTTAAGTGGG +
Preference number: 2 (lower is better)
Translates to: AEQEVRIGGARDYGPWDEAEFFP*PITLSG
Trigger: CCCACTTAAGGTGATGGGGCAAGGGAAGAACTCAGC...TTCATCCCAGGGGCCATAATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR GCA 90 bp CTCATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGGCTGAGTTCTTCCCTTaGCCCATCACCTTAAGTGGG +
Preference number: 2 (lower is better)
Translates to: LIPKSKQQHLLKGEPISLAEFFP*PITLSG
Trigger: CCCACTTAAGGTGATGGGGCAAGGGAAGAACTCAGC...CAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
3UTR-3UTR TCA 90 bp GGTGTTTGGCCCCTTGAAAGATTGAATGTGCCATTGTCTGTACAGGAGACTTCATTCAGTGAGGGCCCCTaGGCACTCATACCTAAAAGC +
Preference number: 2 (lower is better)
Translates to: GVWPLERLNVPLSVQETSFSEGP*ALIPKS
Trigger: GCTTTTAGGTATGAGTGCTCAGGGGCCCTCACTGAA...TGAAGTCTCCTGTACAGACAATGGCACATTCAATCTTTCAAGGGGCCAAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR TCA 90 bp ATCCAGGCCAGCAGGATCCATATTAATGGAAGGGAAGTCTGGAAGGTCTCTGGCAGGTGTTTGGCCCCTTaGAAGATTGAATGTGCCATT +
Preference number: 2 (lower is better)
Translates to: IQASRIHINGREVWKVSGRCLAP*KIECAI
Trigger: AATGGCACATTCAATCTTTCAAGGGGCCAAACACCT...GCCAGAGACCTTCCAGACTTCCCTTCCATTAATATGGATCCTGCTGGCCTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR CCA 90 bp ATCAGAAACCGAAGATTAACTACACAGCTCCAGAAGACTCAGACCTCAAAATACCGATCCCACAGTCGGTaGTACACAGCAAGGGGCCAC +
Preference number: 2 (lower is better)
Translates to: IRNRRLTTQLQKTQTSKYRSHSR*YTARGH
Trigger: GTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCG...GTATTTTGAGGTCTGAGTCTTCTGGAGCTGTGTAGTTAATCTTCGGTTTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR TCA 90 bp CTGCTTGGGGAGGCAGAGGCTATAGACTGGCACAGGTTTAGAATCAAGTACCATAAACCTAAACCACAGTaGCTCCCAAAAGGAGTCTCT +
Preference number: 2 (lower is better)
Translates to: LLGEAEAIDWHRFRIKYHKPKPQ*LPKGVS
Trigger: AGAGACTCCTTTTGGGAGTCACTGTGGTTTAGGTTT...ATGGTACTTGATTCTAAACCTGTGCCAGTCTATAGCCTCTGCCTCCCCAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR TCA 90 bp TATGGAGATTCAGGGCAGGATCCCTCAGGTACAAGAAACACCTTCCGAAGATTTCTGACCACCCCACTATaGGTGACTATGAGACACCTA +
Preference number: 2 (lower is better)
Translates to: YGDSGQDPSGTRNTFRRFLTTPL*VTMRHL
Trigger: TAGGTGTCTCATAGTCACTCATAGTGGGGTGGTCAG...AAATCTTCGGAAGGTGTTTCTTGTACCTGAGGGATCCTGCCCTGAATCTCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR TCA 90 bp CCGAAGATTAACTACACAGCTCCAGAAGACTCAGACCTCAAAATACAGAGGTGCGGCCCCTTGAAAGATTaGATGTGCCATTGTCTGTAC +
Preference number: 2 (lower is better)
Translates to: PKINYTAPEDSDLKIQRCGPLKD*MCHCLY
Trigger: GTACAGACAATGGCACATTCAATCTTTCAAGGGGCC...GCACCTCTGTATTTTGAGGTCTGAGTCTTCTGGAGCTGTGTAGTTAATCTTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR CCA 90 bp TCAGTTCACAGTGGAGACTATGGAGATTCAGGGCAGGATCCCTCAGGTACAAGACCACATTCTTACTATTaGCTCATCCTTAAAGGAGGC +
Preference number: 2 (lower is better)
Translates to: SVHSGDYGDSGQDPSGTRPHSYY*LILKGG
Trigger: GCCTCCTTTAAGGATGAGCCAATAGTAAGAATGTGG...TCTTGTACCTGAGGGATCCTGCCCTGAATCTCCATAGTCTCCACTGTGAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR TCA 90 bp ATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTAAACCTAAACCACAGTaGCTCCCAAAAGGAGTCTCT +
Preference number: 2 (lower is better)
Translates to: IPKSKQQHLLKGEPISLTKPKPQ*LPKGVS
Trigger: AGAGACTCCTTTTGGGAGTCACTGTGGTTTAGGTTT...AGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
3UTR-3UTR CCA 90 bp TATGGAGATTCAGGGCAGGATCCCTCAGGTACAAGAAACACCTTCCGAAGATTTCCACATTCTTACTATTaGCTCATCCTTAAAGGAGGC +
Preference number: 2 (lower is better)
Translates to: YGDSGQDPSGTRNTFRRFPHSYY*LILKGG
Trigger: GCCTCCTTTAAGGATGAGCCAATAGTAAGAATGTGG...AAATCTTCGGAAGGTGTTTCTTGTACCTGAGGGATCCTGCCCTGAATCTCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR GCA 90 bp AATAAAAGCTGTAAAGGAGCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATGGAGCAGGCCTGTTCTaGAAAACCAAAGGACAAGTT +
Preference number: 2 (lower is better)
Translates to: NKSCKGAEQEVRIGGARDGAGLF*KTKGQV
Trigger: AACTTGTCCTTTGGTTTTGCAGAACAGGCCTGCTCC...ATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGCTCCTTTACAGCTTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR TCA 90 bp AATAAAAGCTGTAAAGGAGCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATCTGTATCATCCCCCATaGATTATTGCTTCTCCAAAG +
Preference number: 2 (lower is better)
Translates to: NKSCKGAEQEVRIGGARDLYHPP*IIASPK
Trigger: CTTTGGAGAAGCAATAATTCATGGGGGATGATACAG...ATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGCTCCTTTACAGCTTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR GCA 72 bp GAGAAGATGGGTGGACGGCCCTGGGAAGAACTAGGGTaGCGAAGCCTGCAGGCGGGATGGAGTGGAAGGAGG +
Preference number: 3 (lower is better)
Translates to: EKMGGRPWEELG*RSLQAGWSGRR
Trigger: CCTCCTTCCACTCCATCCCGCCTGCAGGCTTCGGCACCCTAGTTCTTCCCAGGGCCGTCCACCCATCTTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR CCA 72 bp AGTCATCCCCCTCAGCATCAGTGTCCAGGTCTGAACTaGGGGACCGGAGGAAGCCTCTCGTTGCTCTCTGGG +
Preference number: 3 (lower is better)
Translates to: SHPPQHQCPGLN*GTGGSLSLLSG
Trigger: CCCAGAGAGCAACGAGAGGCTTCCTCCGGTCCCCCAGTTCAGACCTGGACACTGATGCTGAGGGGGATGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR CAA 90 bp CAGCACACCCCTCCCCTCCTCAGTTCACAGTGGAGACTATGGAGATTCAGGGCAGGAGGAAGCCTCTCGTaGCTCTCTGGGCAGGTGCTC +
Preference number: 3 (lower is better)
Translates to: QHTPPLLSSQWRLWRFRAGGSLS*LSGQVL
Trigger: GAGCACCTGCCCAGAGAGCAACGAGAGGCTTCCTCC...TGCCCTGAATCTCCATAGTCTCCACTGTGAACTGAGGAGGGGAGGGGTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR CCA 72 bp AAAATGGTCCCACTAACCCAGACTTCAGCTACATGGTaGCAGAGCTCGGGCACGCTGAGCAACCGAGGGTGC +
Preference number: 3 (lower is better)
Translates to: KMVPLTQTSATW*QSSGTLSNRGC
Trigger: GCACCCTCGGTTGCTCAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCTGGGTTAGTGGGACCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR CCA 72 bp GGACAGAAGGCAGCAAGCTCCTCTTCGCTGTCACTGTaGTTGTCCATGGCTCGTTCTGGGTGGAGAGCTCTG +
Preference number: 3 (lower is better)
Translates to: GQKAASSSSLSL*LSMARSGWRAL
Trigger: CAGAGCTCTCCACCCAGAACGAGCCATGGACAACCACAGTGACAGCGAAGAGGAGCTTGCTGCCTTCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR CAA 90 bp CAGGCCCCAAGAAATGATGGGCTAGATGAGAGGGAGCAGGCCTGTTCTGCAAAAGGAGAGAAGCCTCCCTaGGGGGAGCACACTCTCACT +
Preference number: 3 (lower is better)
Translates to: QAPRNDGLDEREQACSAKGEKPP*GEHTLT
Trigger: AGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTCTCC...TTTTGCAGAACAGGCCTGCTCCCTCTCATCTAGCCCATCATTTCTTGGGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR TCA 72 bp TTTGTCGGGCTCAAAAGAGGAGCCCTCGCTCACTCTTaGGCGGCTCAAGATGTTACCAGAAGCTCCCGCCAG +
Preference number: 3 (lower is better)
Translates to: FVGLKRGALAHS*AAQDVTRSSRQ
Trigger: CTGGCGGGAGCTTCTGGTAACATCTTGAGCCGCTCAAGAGTGAGCGAGGGCTCCTCTTTTGAGCCCGACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR TCA 72 bp AGACTTCAGCTACATGGTGGCAGAGCTCGGGCACGCTaGGCAACCGAGGGTGCACAAAGCCCCAGCTTTTAT +
Preference number: 3 (lower is better)
Translates to: RLQLHGGRARAR*ATEGAQSPSFY
Trigger: ATAAAAGCTGGGGCTTTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR TCA 72 bp TTCAAAGTCATCCCCCTCAGCATCAGTGTCCAGGTCTaGACTGGGGGACCGGAGGAAGCCTCTCGTTGCTCT +
Preference number: 3 (lower is better)
Translates to: FKVIPLSISVQV*TGGPEEASRCS
Trigger: AGAGCAACGAGAGGCTTCCTCCGGTCCCCCAGTTCAGACCTGGACACTGATGCTGAGGGGGATGACTTTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR GCA 72 bp TGGTGGCAGAGCTCGGGCACGCTGAGCAACCGAGGGTaGACAAAGCCCCAGCTTTTATTTCAGGCCAGATTT +
Preference number: 3 (lower is better)
Translates to: WWQSSGTLSNRG*TKPQLLFQARF
Trigger: AAATCTGGCCTGAAATAAAAGCTGGGGCTTTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCTGCCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR CCA 72 bp GGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTaGTACACAGCAAGGGGCCACATCATGACAGTGACA +
Preference number: 3 (lower is better)
Translates to: GFSRTYARSHSR*YTARGHIMTVT
Trigger: TGTCACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
3UTR CCA 72 bp ATGAAAATGGTCCCACTAACCCAGACTTCAGCTACATaGTGGCAGAGCTCGGGCACGCTGAGCAACCGAGGG +
Preference number: 3 (lower is better)
Translates to: MKMVPLTQTSAT*WQSSGTLSNRG
Trigger: CCCTCGGTTGCTCAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCTGGGTTAGTGGGACCATTTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR CCA 72 bp TCGCTGTCACTGTGGTTGTCCATGGCTCGTTCTGGGTaGAGAGCTCTGCGGCGTAATTGTCTCTCTCTCTGC +
Preference number: 3 (lower is better)
Translates to: SLSLWLSMARSG*RALRRNCLSLC
Trigger: GCAGAGAGAGAGACAATTACGCCGCAGAGCTCTCCACCCAGAACGAGCCATGGACAACCACAGTGACAGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR CAA 90 bp TTCAACCTGGAAGGCAGACGTTGCAGAAAGCCAAGATCACACCACTGCACTCCAAGCTGCTGCCTGACTTaGGGGGCTCTAGAGAGGCGA +
Preference number: 3 (lower is better)
Translates to: FNLEGRRCRKPRSHHCTPSCCLT*GALERR
Trigger: TCGCCTCTCTAGAGCCCCCAAAGTCAGGCAGCAGCT...TGGAGTGCAGTGGTGTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR TCA 72 bp AGGAAGGCAGGCATGGGCTCTTTCAGTGAGGGCCCCTaGGCACTCATACCTAAAAGCAAACAGCAGCACCTC +
Preference number: 3 (lower is better)
Translates to: RKAGMGSFSEGP*ALIPKSKQQHL
Trigger: GAGGTGCTGCTGTTTGCTTTTAGGTATGAGTGCTCAGGGGCCCTCACTGAAAGAGCCCATGCCTGCCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
3UTR-3UTR CAA 90 bp AGGCTGGCAAGGTTGCTGGTGAGGTTGGATCCTACAGGAAGAGCACCAAGCAGGTTCACAAGCAATACTTaGGACCACTGGGGTTCAGGC +
Preference number: 3 (lower is better)
Translates to: RLARLLVRLDPTGRAPSRFTSNT*DHWGSG
Trigger: GCCTGAACCCCAGTGGTCCAAAGTATTGCTTGTGAA...CCTGCTTGGTGCTCTTCCTGTAGGATCCAACCTCACCAGCAACCTTGCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR CCA 72 bp CACACCCCTCCCCTCCTCAGTTCACAGTGGAGACTATaGAGATTCAGGGCAGGATCCCTCAGGTACAAGAAA +
Preference number: 3 (lower is better)
Translates to: HTPPLLSSQWRL*RFRAGSLRYKK
Trigger: TTTCTTGTACCTGAGGGATCCTGCCCTGAATCTCCATAGTCTCCACTGTGAACTGAGGAGGGGAGGGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR TCA 72 bp GAATGTGCCATTGTCTGTACAGGAGACTTCAGCGTCTaGGTGCTCAGAGTCTGTGATGGCCAATTCCCTGGC +
Preference number: 3 (lower is better)
Translates to: ECAIVCTGDFSV*VLRVCDGQFPG
Trigger: GCCAGGGAATTGGCCATCACAGACTCTGAGCACTCAGACGCTGAAGTCTCCTGTACAGACAATGGCACATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR GCA 72 bp GTGCCATTGTCTGTACAGGAGACTTCAGCGTCTGAGTaGTCAGAGTCTGTGATGGCCAATTCCCTGGCAACA +
Preference number: 3 (lower is better)
Translates to: VPLSVQETSASE*SESVMANSLAT
Trigger: TGTTGCCAGGGAATTGGCCATCACAGACTCTGAGCACTCAGACGCTGAAGTCTCCTGTACAGACAATGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR CAA 90 bp CCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTATTGGAGAGAAGCCTCCCTaGGGGGAGCACACTCTCACT +
Preference number: 3 (lower is better)
Translates to: PKSKQQHLLKGEPISLTIGEKPP*GEHTLT
Trigger: AGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTCTCC...AATAGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
3UTR-3UTR CAA 90 bp GGTGTTTGGCCCCTTGAAAGATTGAATGTGCCATTGTCTGTACAGGAGACTTCAAGCTGCTGCCTGACTTaGGGGGCTCTAGAGAGGCGA +
Preference number: 3 (lower is better)
Translates to: GVWPLERLNVPLSVQETSSCCLT*GALERR
Trigger: TCGCCTCTCTAGAGCCCCCAAAGTCAGGCAGCAGCT...TGAAGTCTCCTGTACAGACAATGGCACATTCAATCTTTCAAGGGGCCAAACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR CAA 90 bp CTGCTTGGGGAGGCAGAGGCTATAGACTGGCACAGGTTTAGAATCAAGTACCATCCTGGAAGGCAGACGTaGCAGAAAGCCAAGATCACA +
Preference number: 3 (lower is better)
Translates to: LLGEAEAIDWHRFRIKYHPGRQT*QKAKIT
Trigger: TGTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAGG...ATGGTACTTGATTCTAAACCTGTGCCAGTCTATAGCCTCTGCCTCCCCAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR CAA 90 bp GCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATTATGGCCCCTGGGATGAAAGGCGGGCTGATCATTaGCAGTCAGGAGTTCTAGAC +
Preference number: 3 (lower is better)
Translates to: AEQEVRIGGARDYGPWDERRADH*QSGVLD
Trigger: GTCTAGAACTCCTGACTGCAAATGATCAGCCCGCCT...TTCATCCCAGGGGCCATAATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR CCA 72 bp CAGGCCAGCAGGATCCATATTAATGGAAGGGAAGTCTaGAAGGTCTCTGGCAAAGGATTCCTCTGGATCACT +
Preference number: 3 (lower is better)
Translates to: QASRIHINGREV*KVSGKGFLWIT
Trigger: AGTGATCCAGAGGAATCCTTTGCCAGAGACCTTCCAGACTTCCCTTCCATTAATATGGATCCTGCTGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR CAA 90 bp ATCAGAAACCGAAGATTAACTACACAGCTCCAGAAGACTCAGACCTCAAAATACGGAGAGAAGCCTCCCTaGGGGGAGCACACTCTCACT +
Preference number: 3 (lower is better)
Translates to: IRNRRLTTQLQKTQTSKYGEKPP*GEHTLT
Trigger: AGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTCTCC...GTATTTTGAGGTCTGAGTCTTCTGGAGCTGTGTAGTTAATCTTCGGTTTCTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR CAA 90 bp TCAGTTCACAGTGGAGACTATGGAGATTCAGGGCAGGATCCCTCAGGTACAAGAGAGTATGGTATTGCTTaGCTCACTGCTGAGGCTGAT +
Preference number: 3 (lower is better)
Translates to: SVHSGDYGDSGQDPSGTREYGIA*LTAEAD
Trigger: ATCAGCCTCAGCAGTGAGCAAAGCAATACCATACTC...TCTTGTACCTGAGGGATCCTGCCCTGAATCTCCATAGTCTCCACTGTGAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR TCA 72 bp AGCCTTCCGTTAGAGGTGTTTGGCCCCTTGAAAGATTaGATGTGCCATTGTCTGTACAGGAGACTTCAGCGT +
Preference number: 3 (lower is better)
Translates to: SLPLEVFGPLKD*MCHCLYRRLQR
Trigger: ACGCTGAAGTCTCCTGTACAGACAATGGCACATTCAATCTTTCAAGGGGCCAAACACCTCTAACGGAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR CAA 90 bp ATCCAGGCCAGCAGGATCCATATTAATGGAAGGGAAGTCTGGAAGGTCTCTGGCATATCCCTGACTATTTaGTTCCCCCAAAGTACCATC +
Preference number: 3 (lower is better)
Translates to: IQASRIHINGREVWKVSGISLTI*FPQSTI
Trigger: GATGGTACTTTGGGGGAACAAAATAGTCAGGGATAT...GCCAGAGACCTTCCAGACTTCCCTTCCATTAATATGGATCCTGCTGGCCTGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR-3UTR CAA 90 bp TCCAGGCCAGCAGGATCCATATTAATGGAAGGGAAGTCTGGAAGGTCTCTGGCAAGATTGAATGTGCCATaGTCTGTACAGGAGACTTCA +
Preference number: 3 (lower is better)
Translates to: SRPAGSILMEGKSGRSLARLNVP*SVQETS
Trigger: TGAAGTCTCCTGTACAGACAATGGCACATTCAATCT...TGCCAGAGACCTTCCAGACTTCCCTTCCATTAATATGGATCCTGCTGGCCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR-3UTR CAA 90 bp AGTCTGGAAGGTCTCTGGCAAAGGATTCCTCTGGATCACTGTGACCATCTAGGTAGATTGAATGTGCCATaGTCTGTACAGGAGACTTCA +
Preference number: 3 (lower is better)
Translates to: SLEGLWQRIPLDHCDHLGRLNVP*SVQETS
Trigger: TGAAGTCTCCTGTACAGACAATGGCACATTCAATCT...ACCTAGATGGTCACAGTGATCCAGAGGAATCCTTTGCCAGAGACCTTCCAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
3UTR TCA 72 bp GGAGCCATTTGTAAAGTGCTACTGTATCATCCCCCATaGATTATTGCTTCTCCAAAGGAGGAGCAGAGGAAG +
Preference number: 3 (lower is better)
Translates to: GAICKVLLYHPP*IIASPKEEQRK
Trigger: CTTCCTCTGCTCCTCCTTTGGAGAAGCAATAATTCATGGGGGATGATACAGTAGCACTTTACAAATGGCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR CAA 90 bp TATGGAGATTCAGGGCAGGATCCCTCAGGTACAAGAAACACCTTCCGAAGATTTATATCCCTGACTATTTaGTTCCCCCAAAGTACCATC +
Preference number: 3 (lower is better)
Translates to: YGDSGQDPSGTRNTFRRFISLTI*FPQSTI
Trigger: GATGGTACTTTGGGGGAACAAAATAGTCAGGGATAT...AAATCTTCGGAAGGTGTTTCTTGTACCTGAGGGATCCTGCCCTGAATCTCCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR-3UTR CAA 90 bp AATAAAAGCTGTAAAGGAGCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATCCTGGAAGGCAGACGTaGCAGAAAGCCAAGATCACA +
Preference number: 3 (lower is better)
Translates to: NKSCKGAEQEVRIGGARDPGRQT*QKAKIT
Trigger: TGTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAGG...ATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGCTCCTTTACAGCTTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR TCA 72 bp ATAGGTGGTGCAAGAGATTATGGCCCCTGGGATGAATaGCATGGAGCCATTTGTAAAGTGCTACTGTATCAT +
Preference number: 3 (lower is better)
Translates to: IGGARDYGPWDE*HGAICKVLLYH
Trigger: ATGATACAGTAGCACTTTACAAATGGCTCCATGTCATTCATCCCAGGGGCCATAATCTCTTGCACCACCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp GGATCCTACAGGAAGAGCACCAAGCAGGAGCTCCGGCAGCGCAGCCTCGTCCCGCAGCCTCGTCCCGGCTaGCAGGTGGGGCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GSYRKSTKQELRQRSLVPQPRPG*QVGPGA
Trigger: AGCCCCAGGCCCCACCTGCCAGCCGGGACGAGGCTG...CGGGACGAGGCTGCGCTGCCGGAGCTCCTGCTTGGTGCTCTTCCTGTAGGATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp GGGGGACCGGAGGAAGCCTCTCGTTGCTCTCTGGGCAGGTGCTCCAGAAGGGCCCACACCAGGGCTGCCTaGACCCGACTCAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GGPEEASRCSLGRCSRRAHTRAA*TRLSRG
Trigger: GCCTCTGCTGAGTCGGGTGCAGGCAGCCCTGGTGTG...GGCCCTTCTGGAGCACCTGCCCAGAGAGCAACGAGAGGCTTCCTCCGGTCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp GCCGCTGCAGAGCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTTCCACCAGGGCCCGCTaGGCCGCCTCAACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AAAELASAAHMLDPTVGGSTRAR*AASTCW
Trigger: CCAGCAGGTTGAGGCGGCGCAGCGGGCCCTGGTGGA...ACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGCAGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CCTACAGGAAGAGCACCAAGCAGGAGCTCCGGCAGCGCAGCCTCGTCCCGGCTGGTCCATGGCTCGTTCTaGGTGGAGAGCTCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: PTGRAPSRSSGSAASSRLVHGSF*VESSAA
Trigger: CGCCGCAGAGCTCTCCACCCAGAACGAGCCATGGAC...CAGCCGGGACGAGGCTGCGCTGCCGGAGCTCCTGCTTGGTGCTCTTCCTGTAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATCAGCAGCCTCGTCCCGGCTaGCAGGTGGGGCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PAGGRGVSVLSKEASEHQQPRPG*QVGPGA
Trigger: AGCCCCAGGCCCCACCTGCCAGCCGGGACGAGGCTG...CTGATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp GGATCCTACAGGAAGAGCACCAAGCAGGAGCTCCGGCAGCGCAGCCTCGTCCCGCTGGTGGGAGGGGAGTaGGTGTCCTCTCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GSYRKSTKQELRQRSLVPLVGGE*VSSLRR
Trigger: CCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAG...CGGGACGAGGCTGCGCTGCCGGAGCTCCTGCTTGGTGCTCTTCCTGTAGGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp TCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCCACCAGGGCCCGCTaGGCCGCCTCAACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SAAHMLDPTVGGTQQGATSTRAR*AASTCW
Trigger: CCAGCAGGTTGAGGCGGCGCAGCGGGCCCTGGTGGA...TGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp AGCCGCTGCAGAGCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGCTCCCACACCAGGGCTaGCTGCACCCGACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SRCRAGFSRTYARSHSRWLPHQG*LHPTQQ
Trigger: CTGCTGAGTCGGGTGCAGGCAGCCCTGGTGTGGGAG...CCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGCAGCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACCGGGCCTGGGGTCGTaGGAACCCCTTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LQPHICSIPQSVVHSKGPPGLGS*EPLRPQ
Trigger: CTGAGGCCGAAGGGGTTCCCACGACCCCAGGCCCGG...TGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp GACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCCGGGCCTGGGGTCGTaGGAACCCCTTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: DKHQVGQQKPRDVAAQDSPGLGS*EPLRPQ
Trigger: CTGAGGCCGAAGGGGTTCCCACGACCCCAGGCCCGG...GCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR CCA 90 bp CAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAAAAAGGTCAGTATCCCCCCCGAAGCCGGGCCTaGGGTCGTGGGAACCCCTTC +
Preference number: 4 (lower is better)
Translates to: QQKPRDVAAQDSQKGQYPPRSRA*GRGNPF
Trigger: GAAGGGGTTCCCACGACCCCAGGCCCGGCTTCGGGG...GGGATACTGACCTTTTTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTG
64% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR CCA 90 bp TTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACCCCCGAAGCCGGGCCTaGGGTCGTGGGAACCCCTTC +
Preference number: 4 (lower is better)
Translates to: FSRTYARSHSRWYTARGHPRSRA*GRGNPF
Trigger: GAAGGGGTTCCCACGACCCCAGGCCCGGCTTCGGGG...GTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp GACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCCCCGAAGCCGGGCCTaGGGTCGTGGGAACCCCTTC +
Preference number: 4 (lower is better)
Translates to: DKHQVGQQKPRDVAAQDSPRSRA*GRGNPF
Trigger: GAAGGGGTTCCCACGACCCCAGGCCCGGCTTCGGGG...GCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR CCA 90 bp CCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATCAGCAGAGCGCTCCTAGCTaGCCGCTCCCACACCAGGGC +
Preference number: 4 (lower is better)
Translates to: PAGGRGVSVLSKEASEHQQSAPS*PLPHQG
Trigger: GCCCTGGTGTGGGAGCGGCCAGCTAGGAGCGCTCTG...CTGATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000586870.5
ENST00000589797.5
3UTR CAA 72 bp CCAGGTCTGAACTGGGGGACCGGAGGAAGCCTCTCGTaGCTCTCTGGGCAGGTGCTCCAGAAGGGCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PGLNWGTGGSLS*LSGQVLQKGLV
Trigger: AACCAGGCCCTTCTGGAGCACCTGCCCAGAGAGCAACGAGAGGCTTCCTCCGGTCCCCCAGTTCAGACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp TCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACACATCTCGGCGGCCCCTaGAAGTCGACCCCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: SAAHMLDPTVGGTQQGATHLGGP*KSTPKP
Trigger: CGGCTTCGGGGTCGACTTTCAGGGGCCGCCGAGATG...TGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CAGCACACCCCTCCCCTCCTCAGTTCACAGTGGAGACTATGGAGATTCAGGGCACCGCTCCCAGGAGCCTaGCACATCTCGGCGGCCCCT +
Preference number: 4 (lower is better)
Translates to: QHTPPLLSSQWRLWRFRAPLPGA*HISAAP
Trigger: AGGGGCCGCCGAGATGTGTCAGGCTCCTGGGAGCGG...TGCCCTGAATCTCCATAGTCTCCACTGTGAACTGAGGAGGGGAGGGGTGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp TGCAGAGCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACATCCACCAGGGCCCGCTaGGCCGCCTCAACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CRAGFSRTYARSHSRWYTSTRAR*AASTCW
Trigger: CCAGCAGGTTGAGGCGGCGCAGCGGGCCCTGGTGGA...TGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp CGCTGCAGAGCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACCCGGCAGGCGGAGGCTaGAGTGAGCCGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: RCRAGFSRTYARSHSRWYPAGGG*SEPRLC
Trigger: GCACAATCTCGGCTCACTGCAGCCTCCGCCTGCCGG...GTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CCA 90 bp TGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGACAGTGACCCGGGCCTGGGGTCGTaGGAACCCCTTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: CSIPQSVVHSKGPHHDSDPGLGS*EPLRPQ
Trigger: CTGAGGCCGAAGGGGTTCCCACGACCCCAGGCCCGG...GTCACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp GGAGAGAAGCCTCCCTTGGGGGAGCACACTCTCACTTCAGTGACTGAGCTCAGACCCCGAAGCCGGGCCTaGGGTCGTGGGAACCCCTTC +
Preference number: 4 (lower is better)
Translates to: GEKPPLGEHTLTSVTELRPRSRA*GRGNPF
Trigger: GAAGGGGTTCCCACGACCCCAGGCCCGGCTTCGGGG...TCTGAGCTCAGTCACTGAAGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp CTGAAGCGCACACTCATGCAAACACACGAAATCCCCCTCCTTCCCCACACCTCCTGCGCCGCCTCAACCTaGTGGTCCCGCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LKRTLMQTHEIPLLPHTSCAAST*WSRSQE
Trigger: CTCCTGGGAGCGGGACCAGCAGGTTGAGGCGGCGCA...GGAGGTGTGGGGAAGGAGGGGGATTTCGTGTGTTTGCATGAGTGTGCGCTTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp GACAGTGACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGGCCCAATGCGCCGCCTCAACCTaGTGGTCCCGCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: DSDKHQVGQQKPRDVAAQCAAST*WSRSQE
Trigger: CTCCTGGGAGCGGGACCAGCAGGTTGAGGCGGCGCA...TTGGGCCGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTCACTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR GCA 90 bp AAAGGAGTCTCTGCCTCAGTGGCTCCTAGAACTGGCAGGGTCCAGCTGACTCAGTGCGCCGCCTCAACCTaGTGGTCCCGCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: KGVSASVAPRTGRVQLTQCAAST*WSRSQE
Trigger: CTCCTGGGAGCGGGACCAGCAGGTTGAGGCGGCGCA...CTGAGTCAGCTGGACCCTGCCAGTTCTAGGAGCCACTGAGGCAGAGACTCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp GCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGGGAGGGGTCCACCAGGGCCCGCTaGGCCGCCTCAACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: ASEHQPGHPAYKYNSGEGSTRAR*AASTCW
Trigger: CCAGCAGGTTGAGGCGGCGCAGCGGGCCCTGGTGGA...CCCCTCCCCTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp GACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCACACCAGGGCTGCCTaGACCCGACTCAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: DKHQVGQQKPRDVAAQDSHTRAA*TRLSRG
Trigger: GCCTCTGCTGAGTCGGGTGCAGGCAGCCCTGGTGTG...GCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR GCA 90 bp CAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAAAAAGGTCAGTATCCCCTCCCACACCAGGGCTaGCTGCACCCGACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QQKPRDVAAQDSQKGQYPLPHQG*LHPTQQ
Trigger: CTGCTGAGTCGGGTGCAGGCAGCCCTGGTGTGGGAG...GGGATACTGACCTTTTTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR GCA 90 bp CAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCACTCCCACACCAGGGCTaGCTGCACCCGACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QASSRTAEAQGRSGPRQPLPHQG*LHPTQQ
Trigger: CTGCTGAGTCGGGTGCAGGCAGCCCTGGTGTGGGAG...TGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR CCA 90 bp CGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGACAGTGACAAGCGCCGCCTCAACCTGCTaGTCCCGCTCCCAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RSHSRWYTARGHIMTVTSAASTC*SRSQEP
Trigger: AGGCTCCTGGGAGCGGGACCAGCAGGTTGAGGCGGC...GCTTGTCACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR CCA 90 bp TGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGACAGTGACCAGAGCGCTCCTAGCTaGCCGCTCCCACACCAGGGC +
Preference number: 4 (lower is better)
Translates to: CSIPQSVVHSKGPHHDSDQSAPS*PLPHQG
Trigger: GCCCTGGTGTGGGAGCGGCCAGCTAGGAGCGCTCTG...GTCACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp TCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGACAGTGACAAGCATCTCGGCGGCCCCTaGAAGTCGACCCCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: SIPQSVVHSKGPHHDSDKHLGGP*KSTPKP
Trigger: CGGCTTCGGGGTCGACTTTCAGGGGCCGCCGAGATG...CTTGTCACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp GACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCAGAGCTCGGGCACGCTaGGCAACCGAGGGTGCACAA +
Preference number: 4 (lower is better)
Translates to: DKHQVGQQKPRDVAAQDSRARAR*ATEGAQ
Trigger: TTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCT...GCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp TCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACAAGAGCTCGGGCACGCTaGGCAACCGAGGGTGCACAA +
Preference number: 4 (lower is better)
Translates to: SAAHMLDPTVGGTQQGATRARAR*ATEGAQ
Trigger: TTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCT...TGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp TGTCCAGGTCTGAACTGGGGGACCGGAGGAAGCCTCTCGTTGCTCTCTGGGCAGATCAGTGTCCAGGTCTaGACTGGGGGACCGGAGGAA +
Preference number: 4 (lower is better)
Translates to: CPGLNWGTGGSLSLLSGQISVQV*TGGPEE
Trigger: TTCCTCCGGTCCCCCAGTTCAGACCTGGACACTGAT...CTGCCCAGAGAGCAACGAGAGGCTTCCTCCGGTCCCCCAGTTCAGACCTGGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp GCAGAGCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGAGGCGGAGGCTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: AELASAAHMLDPTVGGTQRRRLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCAGCCTCCGCCT...CTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR GCA 90 bp CATCATGACAGTGACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGTCCACCAGGGCCCGCTaGGCCGCCTCAACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: HHDSDKHQVGQQKPRDVASTRAR*AASTCW
Trigger: CCAGCAGGTTGAGGCGGCGCAGCGGGCCCTGGTGGA...CGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTCACTGTCATGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR GCA 90 bp CTGAAGCGCACACTCATGCAAACACACGAAATCCCCCTCCTTCCCCACACCTCCCACACCAGGGCTGCCTaGACCCGACTCAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LKRTLMQTHEIPLLPHTSHTRAA*TRLSRG
Trigger: GCCTCTGCTGAGTCGGGTGCAGGCAGCCCTGGTGTG...GGAGGTGTGGGGAAGGAGGGGGATTTCGTGTGTTTGCATGAGTGTGCGCTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp CGCTGCAGAGCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACCTGAAGTCTAGCCGCTaGAGAGCTGGCTTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RCRAGFSRTYARSHSRWYLKSSR*RAGFSR
Trigger: GCGGCTGAAGCCAGCTCTGCAGCGGCTAGACTTCAG...GTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGCAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp CCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATCAGCTGAAGTCTAGCCGCTaGAGAGCTGGCTTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PAGGRGVSVLSKEASEHQLKSSR*RAGFSR
Trigger: GCGGCTGAAGCCAGCTCTGCAGCGGCTAGACTTCAG...CTGATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp ATGAAAATGGTCCCACTAACCCAGACTTCAGCTACATGGTGGCAGAGCTCGGGCCCGGGCCTGGGGTCGTaGGAACCCCTTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: MKMVPLTQTSATWWQSSGPGLGS*EPLRPQ
Trigger: CTGAGGCCGAAGGGGTTCCCACGACCCCAGGCCCGG...GCCCGAGCTCTGCCACCATGTAGCTGAAGTCTGGGTTAGTGGGACCATTTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CCA 90 bp CATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAAAAACAGAGCGCTCCTAGCTaGCCGCTCCCACACCAGGGC +
Preference number: 4 (lower is better)
Translates to: HQVGQQKPRDVAAQDSQKQSAPS*PLPHQG
Trigger: GCCCTGGTGTGGGAGCGGCCAGCTAGGAGCGCTCTG...TTTTTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR CCA 90 bp GCCGCTGCAGAGCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTCAGACTTCAGCTACATaGTGGCAGAGCTCGGGCACG +
Preference number: 4 (lower is better)
Translates to: AAAELASAAHMLDPTVGGQTSAT*WQSSGT
Trigger: CGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCTG...ACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGCAGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATCAGGGGCTCCTCAGCCCCTaGCGGAGAACGGTACATCAA +
Preference number: 4 (lower is better)
Translates to: PAGGRGVSVLSKEASEHQGLLSP*RRTVHQ
Trigger: TTGATGTACCGTTCTCCGCCAGGGGCTGAGGAGCCC...CTGATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATCAGTGTCCAGGTCTGAACTaGGGGACCGGAGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: PAGGRGVSVLSKEASEHQCPGLN*GTGGSL
Trigger: GAGGCTTCCTCCGGTCCCCCAGTTCAGACCTGGACA...CTGATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
3UTR CAA 72 bp CCCTGGGAGACCAGGCTGGCAAGGTTGCTGGTGAGGTaGGATCCTACAGGAAGAGCACCAAGCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: PWETRLARLLVR*DPTGRAPSRSS
Trigger: GGAGCTCCTGCTTGGTGCTCTTCCTGTAGGATCCAACCTCACCAGCAACCTTGCCAGCCTGGTCTCCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CATCATGACAGTGACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGCATCTCGGCGGCCCCTaGAAGTCGACCCCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: HHDSDKHQVGQQKPRDVAHLGGP*KSTPKP
Trigger: CGGCTTCGGGGTCGACTTTCAGGGGCCGCCGAGATG...CGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTCACTGTCATGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR TCA 90 bp GGAGACCAGGCTGGCAAGGTTGCTGGTGAGGTTGGATCCTACAGGAAGAGCACCCTGGTGGGAGGGGAGTaGGTGTCCTCTCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: GDQAGKVAGEVGSYRKSTLVGGE*VSSLRR
Trigger: CCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAG...GGTGCTCTTCCTGTAGGATCCAACCTCACCAGCAACCTTGCCAGCCTGGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATCAGCATGGGCTCTTTCAGTaGGGGCCCCTGAGCACTCAT +
Preference number: 4 (lower is better)
Translates to: PAGGRGVSVLSKEASEHQHGLFQ*GPLSTH
Trigger: ATGAGTGCTCAGGGGCCCTCACTGAAAGAGCCCATG...CTGATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CACCCCTCCCCTCCTCAGTTCACAGTGGAGACTATGGAGATTCAGGGCAGGATCATCCTCCCAGCCAGCTaGTCCCCCTGGGCCAAGGTA +
Preference number: 4 (lower is better)
Translates to: HPSPPQFTVETMEIQGRIILPAS*SPWAKV
Trigger: TACCTTGGCCCAGGGGGATCAGCTGGCTGGGAGGAT...GATCCTGCCCTGAATCTCCATAGTCTCCACTGTGAACTGAGGAGGGGAGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp CACAGTGACTCCCAAAAGGAGTCTCTGCCTCAGTGGCTCCTAGAACTGGCAGGGATCCTCCCAGCCAGCTaGTCCCCCTGGGCCAAGGTA +
Preference number: 4 (lower is better)
Translates to: HSDSQKESLPQWLLELAGILPAS*SPWAKV
Trigger: TACCTTGGCCCAGGGGGATCAGCTGGCTGGGAGGAT...CCCTGCCAGTTCTAGGAGCCACTGAGGCAGAGACTCCTTTTGGGAGTCACTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR GCA 90 bp CTGAGGCAGGAGAACCTCTTCAACCTGGAAGGCAGACGTTGCAGAAAGCCAAGATGCGCCGCCTCAACCTaGTGGTCCCGCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LRQENLFNLEGRRCRKPRCAAST*WSRSQE
Trigger: CTCCTGGGAGCGGGACCAGCAGGTTGAGGCGGCGCA...TCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTTGAAGAGGTTCTCCTGCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp CATCATGACAGTGACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGTGCGCCGCCTCAACCTaGTGGTCCCGCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: HHDSDKHQVGQQKPRDVACAAST*WSRSQE
Trigger: CTCCTGGGAGCGGGACCAGCAGGTTGAGGCGGCGCA...CGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTCACTGTCATGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR GCA 90 bp GGGCCACATCATGACAGTGACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACCTCCCACACCAGGGCTaGCTGCACCCGACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GPHHDSDKHQVGQQKPRDLPHQG*LHPTQQ
Trigger: CTGCTGAGTCGGGTGCAGGCAGCCCTGGTGTGGGAG...GTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTCACTGTCATGATGTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR GCA 90 bp TGTCCAGGTCTGAACTGGGGGACCGGAGGAAGCCTCTCGTTGCTCTCTGGGCAGCTTCAGCCGCACATATaGTCGATCCCACAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: CPGLNWGTGGSLSLLSGQLQPHI*SIPQSV
Trigger: CACCGACTGTGGGATCGAGCATATGTGCGGCTGAAG...CTGCCCAGAGAGCAACGAGAGGCTTCCTCCGGTCCCCCAGTTCAGACCTGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp CTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACTGAAGTCTAGCCGCTaGAGAGCTGGCTTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LQPHICSIPQSVVHSKGPLKSSR*RAGFSR
Trigger: GCGGCTGAAGCCAGCTCTGCAGCGGCTAGACTTCAG...TGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp TGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGGAGGAAGCCTCTCGTTaGTCTCTGGGCAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: WLQPHICSIPQSVVHSKGEEASR*SLGRCS
Trigger: GGAGCACCTGCCCAGAGAGCAACGAGAGGCTTCCTC...CCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp CATCCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATTGGGAAGAACTAGGGTaGCGAAGCCTGCAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: HPAGGRGVSVLSKEASEHWEELG*RSLQAG
Trigger: TCCCGCCTGCAGGCTTCGGCACCCTAGTTCTTCCCA...ATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CCA 90 bp GAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGGGAGGCCGCCTCAACCTGCTaGTCCCGCTCCCAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: EASEHQPGHPAYKYNSGEAASTC*SRSQEP
Trigger: AGGCTCCTGGGAGCGGGACCAGCAGGTTGAGGCGGC...CTCCCCTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CATCATGACAGTGACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGGCCGCCTCAACCTGCTaGTCCCGCTCCCAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: HHDSDKHQVGQQKPRDVAAASTC*SRSQEP
Trigger: AGGCTCCTGGGAGCGGGACCAGCAGGTTGAGGCGGC...CGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTCACTGTCATGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR CCA 90 bp CAGGCCCCAAGAAATGATGGGCTAGATGAGAGGGAGCAGGCCTGTTCTGCAAAACAGAGCGCTCCTAGCTaGCCGCTCCCACACCAGGGC +
Preference number: 4 (lower is better)
Translates to: QAPRNDGLDEREQACSAKQSAPS*PLPHQG
Trigger: GCCCTGGTGTGGGAGCGGCCAGCTAGGAGCGCTCTG...TTTTGCAGAACAGGCCTGCTCCCTCTCATCTAGCCCATCATTTCTTGGGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp GAACGGTACATCAAGCTGGGCATGCCAATGCTAGTGTCGTCCTCATCATCCAGGCAGAGCGCTCCTAGCTaGCCGCTCCCACACCAGGGC +
Preference number: 4 (lower is better)
Translates to: ERYIKLGMPMLVSSSSSRQSAPS*PLPHQG
Trigger: GCCCTGGTGTGGGAGCGGCCAGCTAGGAGCGCTCTG...CCTGGATGATGAGGACGACACTAGCATTGGCATGCCCAGCTTGATGTACCGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATCAGACTTCAGCTACATGGTaGCAGAGCTCGGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: PAGGRGVSVLSKEASEHQTSATW*QSSGTL
Trigger: CAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGT...CTGATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp GCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAAAAAGGTCAGTATCCCACCGATCCCACAGTCGGTaGTACACAGCAAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: AEAQGRSGPRQPKRSVSHRSHSR*YTARGH
Trigger: GTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCG...GTGGGATACTGACCTTTTTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR CCA 90 bp TGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGACAGTGACGTCCATGGCTCGTTCTaGGTGGAGAGCTCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: CSIPQSVVHSKGPHHDSDVHGSF*VESSAA
Trigger: CGCCGCAGAGCTCTCCACCCAGAACGAGCCATGGAC...GTCACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp GCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAAAAAGGTCAGTATCCCACGGAGGAAGGCAGGCATaGGCTCTTTCAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: AEAQGRSGPRQPKRSVSHGGRQA*ALSVRA
Trigger: GGCCCTCACTGAAAGAGCCCATGCCTGCCTTCCTCC...GTGGGATACTGACCTTTTTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR CAA 72 bp CAGAAGGCAGCAAGCTCCTCTTCGCTGTCACTGTGGTaGTCCATGGCTCGTTCTGGGTGGAGAGCTCTGCGG +
Preference number: 4 (lower is better)
Translates to: QKAASSSSLSLW*SMARSGWRALR
Trigger: CCGCAGAGCTCTCCACCCAGAACGAGCCATGGACAACCACAGTGACAGCGAAGAGGAGCTTGCTGCCTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp GCTGCAGAGCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACATGTAGCCACGGACACTaGAGTCTAGCCGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: AAELASAAHMLDPTVGGTCSHGH*SLAAAE
Trigger: CTCTGCAGCGGCTAGACTTCAGTGTCCGTGGCTACA...TGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CCTACAGGAAGAGCACCAAGCAGGAGCTCCGGCAGCGCAGCCTCGTCCCGGCTGGGGAACCAATATCCCTaGCTATTTTGTTCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: PTGRAPSRSSGSAASSRLGNQYP*LFCSPK
Trigger: TTTGGGGGAACAAAATAGTCAGGGATATTGGTTCCC...CAGCCGGGACGAGGCTGCGCTGCCGGAGCTCCTGCTTGGTGCTCTTCCTGTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR TCA 90 bp CATCCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATCATGGGCTCTTTCAGTaGGGGCCCCTGAGCACTCAT +
Preference number: 4 (lower is better)
Translates to: HPAGGRGVSVLSKEASEHHGLFQ*GPLSTH
Trigger: ATGAGTGCTCAGGGGCCCTCACTGAAAGAGCCCATG...ATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR GCA 90 bp CATCATGACAGTGACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGCACACCAGGGCTGCCTaGACCCGACTCAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: HHDSDKHQVGQQKPRDVAHTRAA*TRLSRG
Trigger: GCCTCTGCTGAGTCGGGTGCAGGCAGCCCTGGTGTG...CGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTCACTGTCATGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR GCA 90 bp CTGAAGCGCACACTCATGCAAACACACGAAATCCCCCTCCTTCCCCACACCTCCCTGAAGTCTAGCCGCTaGAGAGCTGGCTTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LKRTLMQTHEIPLLPHTSLKSSR*RAGFSR
Trigger: GCGGCTGAAGCCAGCTCTGCAGCGGCTAGACTTCAG...GGAGGTGTGGGGAAGGAGGGGGATTTCGTGTGTTTGCATGAGTGTGCGCTTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp CACTGTGGTTGTCCATGGCTCGTTCTGGGTGGAGAGCTCTGCGGCGTAATTGTCGAGGAAGCCTCTCGTTaGTCTCTGGGCAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: HCGCPWLVLGGELCGVIVEEASR*SLGRCS
Trigger: GGAGCACCTGCCCAGAGAGCAACGAGAGGCTTCCTC...GACAATTACGCCGCAGAGCTCTCCACCCAGAACGAGCCATGGACAACCACAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp GCCGCTGCAGAGCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTTGTAACTACTCCAGCTaGTGCCTGACTTTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: AAAELASAAHMLDPTVGGCNYSS*CLTLGA
Trigger: AGCCCCCAAAGTCAGGCAGCAGCTGGAGTAGTTACA...ACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGCAGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CCA 90 bp TCCAGGCCAGCAGGATCCATATTAATGGAAGGGAAGTCTGGAAGGTCTCTGGCAGCCGCCTCAACCTGCTaGTCCCGCTCCCAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SRPAGSILMEGKSGRSLAAASTC*SRSQEP
Trigger: AGGCTCCTGGGAGCGGGACCAGCAGGTTGAGGCGGC...TGCCAGAGACCTTCCAGACTTCCCTTCCATTAATATGGATCCTGCTGGCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAACTTCAGCTACATGGTaGCAGAGCTCGGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: QASSRTAEAQGRSGPRQPTSATW*QSSGTL
Trigger: CAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGT...TGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp TGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCAGACTTCAGCTACATaGTGGCAGAGCTCGGGCACG +
Preference number: 4 (lower is better)
Translates to: WLQPHICSIPQSVVHSKGQTSAT*WQSSGT
Trigger: CGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCTG...CCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATCAGATGGCTCGTTCTGGGTaGAGAGCTCTGCGGCGTAAT +
Preference number: 4 (lower is better)
Translates to: PAGGRGVSVLSKEASEHQMARSG*RALRRN
Trigger: ATTACGCCGCAGAGCTCTCCACCCAGAACGAGCCAT...CTGATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGGGGCTCCTCAGCCCCTaGCGGAGAACGGTACATCAA +
Preference number: 4 (lower is better)
Translates to: RTYARSHSRWYTARGHIMGLLSP*RRTVHQ
Trigger: TTGATGTACCGTTCTCCGCCAGGGGCTGAGGAGCCC...CATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CATCCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATGAGTCTCTGCCTCAGTaGCTCCTAGAACTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HPAGGRGVSVLSKEASEHESLPQ*LLELAG
Trigger: CCCTGCCAGTTCTAGGAGCCACTGAGGCAGAGACTC...ATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAAAAAGGTCAGTATCCCACAATGGGTGGACGGCCCTaGGAAGAACTAGGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: QKPRDVAAQDSQKGQYPTMGGRP*EELGCR
Trigger: TCGGCACCCTAGTTCTTCCCAGGGCCGTCCACCCAT...TGTGGGATACTGACCTTTTTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR TCA 90 bp TGGCCAGATGGACCCAGGGGTTATCAGAAACCGAAGATTAACTACACAGCTCCACATCTCGGCGGCCCCTaGAAGTCGACCCCGAAGCCG +
Preference number: 4 (lower is better)
Translates to: WPDGPRGYQKPKINYTAPHLGGP*KSTPKP
Trigger: CGGCTTCGGGGTCGACTTTCAGGGGCCGCCGAGATG...TGGAGCTGTGTAGTTAATCTTCGGTTTCTGATAACCCCTGGGTCCATCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp CACTGTGGTTGTCCATGGCTCGTTCTGGGTGGAGAGCTCTGCGGCGTAATTGTCTGTAGCCACGGACACTaGAGTCTAGCCGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: HCGCPWLVLGGELCGVIVCSHGH*SLAAAE
Trigger: CTCTGCAGCGGCTAGACTTCAGTGTCCGTGGCTACA...GACAATTACGCCGCAGAGCTCTCCACCCAGAACGAGCCATGGACAACCACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CAGCATCAGTGTCCAGGTCTGAACTGGGGGACCGGAGGAAGCCTCTCGTTGCTCTGGCAAGGTTGCTGGTaGGGTTGGATCCTACAGGAA +
Preference number: 4 (lower is better)
Translates to: QHQCPGLNWGTGGSLSLLWQGCW*GWILQE
Trigger: TTCCTGTAGGATCCAACCTCACCAGCAACCTTGCCA...GAGCAACGAGAGGCTTCCTCCGGTCCCCCAGTTCAGACCTGGACACTGATGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp AAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAATGGTTGGGAGGCCCCTaGCAAGGCCAGCTGAATCAT +
Preference number: 4 (lower is better)
Translates to: KHQVGQQKPRDVAAQDSQWLGGP*QGQLNH
Trigger: ATGATTCAGCTGGCCTTGTCAGGGGCCTCCCAACCA...TTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATATCAGTGTCCAGGTCTaGACTGGGGGACCGGAGGAA +
Preference number: 4 (lower is better)
Translates to: PHICSIPQSVVHSKGPHHISVQV*TGGPEE
Trigger: TTCCTCCGGTCCCCCAGTTCAGACCTGGACACTGAT...ATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CATCCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATGCCTGGCCAGCACGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: HPAGGRGVSVLSKEASEHAWPAR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCGTGCTGGCCAGGC...ATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp AGCCGCTGCAGAGCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGGGCCCCTGGGATGAATaGCATGGAGCCATTTGTAAA +
Preference number: 4 (lower is better)
Translates to: SRCRAGFSRTYARSHSRWGPWDE*HGAICK
Trigger: TTTACAAATGGCTCCATGTCATTCATCCCAGGGGCC...CCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGCAGCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR TCA 90 bp AAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAACAGAAGCGTTTGGCTTaGGCTCTGCTTGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KHQVGQQKPRDVAAQDSQQKRLA*ALLGEA
Trigger: TGCCTCCCCAAGCAGAGCTCAAGCCAAACGCTTCTG...TTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR GCA 90 bp TTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACCTTCAGCCGCACATATaGTCGATCCCACAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: FSRTYARSHSRWYTARGHLQPHI*SIPQSV
Trigger: CACCGACTGTGGGATCGAGCATATGTGCGGCTGAAG...GTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp GCAGAGCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGGTTTGGCTTGAGCTCTaGTTGGGGAGGCAGAGGCTA +
Preference number: 4 (lower is better)
Translates to: AELASAAHMLDPTVGGTQVWLEL*LGRQRL
Trigger: TAGCCTCTGCCTCCCCAAGCAGAGCTCAAGCCAAAC...CTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CCA 90 bp AGATTGAATGTGCCATTGTCTGTACAGGAGACTTCAGCGTCTGAGTGCTCAGAGCCCCGAAGCCGGGCCTaGGGTCGTGGGAACCCCTTC +
Preference number: 4 (lower is better)
Translates to: RLNVPLSVQETSASECSEPRSRA*GRGNPF
Trigger: GAAGGGGTTCCCACGACCCCAGGCCCGGCTTCGGGG...CTCTGAGCACTCAGACGCTGAAGTCTCCTGTACAGACAATGGCACATTCAATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp GGAGCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATTATGGCCCCTGGGATGCCGCCTCAACCTGCTaGTCCCGCTCCCAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: GAEQEVRIGGARDYGPWDAASTC*SRSQEP
Trigger: AGGCTCCTGGGAGCGGGACCAGCAGGTTGAGGCGGC...ATCCCAGGGGCCATAATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp GGGCCACATCATGACAGTGACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACCGATCCCACAGTCGGTaGTACACAGCAAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: GPHHDSDKHQVGQQKPRDRSHSR*YTARGH
Trigger: GTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCG...GTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTCACTGTCATGATGTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR CCA 90 bp CATCCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATCACTGTGGTTGTCCATaGCTCGTTCTGGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: HPAGGRGVSVLSKEASEHHCGCP*LVLGGE
Trigger: CTCTCCACCCAGAACGAGCCATGGACAACCACAGTG...ATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp TTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACCACTGTGGTTGTCCATaGCTCGTTCTGGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: FSRTYARSHSRWYTARGHHCGCP*LVLGGE
Trigger: CTCTCCACCCAGAACGAGCCATGGACAACCACAGTG...GTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp AAGCGCACACTCATGCAAACACACGAAATCCCCCTCCTTCCCCACACCTCCTGTGGGCTCCTCAGCCCCTaGCGGAGAACGGTACATCAA +
Preference number: 4 (lower is better)
Translates to: KRTLMQTHEIPLLPHTSCGLLSP*RRTVHQ
Trigger: TTGATGTACCGTTCTCCGCCAGGGGCTGAGGAGCCC...ACAGGAGGTGTGGGGAAGGAGGGGGATTTCGTGTGTTTGCATGAGTGTGCGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp AGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTATTTTGTTCCAGCCTCGTCCCGGCTaGCAGGTGGGGCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SKQQHLLKGEPISLTILFQPRPG*QVGPGA
Trigger: AGCCCCAGGCCCCACCTGCCAGCCGGGACGAGGCTG...GAACAAAATAGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CCA 90 bp GCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGGGAGGGGTGTCCAGGTCTGAACTaGGGGACCGGAGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: ASEHQPGHPAYKYNSGEGCPGLN*GTGGSL
Trigger: GAGGCTTCCTCCGGTCCCCCAGTTCAGACCTGGACA...CCCCTCCCCTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CACTGTGGTTGTCCATGGCTCGTTCTGGGTGGAGAGCTCTGCGGCGTAATTGTCGAGTCTCTGCCTCAGTaGCTCCTAGAACTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HCGCPWLVLGGELCGVIVESLPQ*LLELAG
Trigger: CCCTGCCAGTTCTAGGAGCCACTGAGGCAGAGACTC...GACAATTACGCCGCAGAGCTCTCCACCCAGAACGAGCCATGGACAACCACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp AAGCGCACACTCATGCAAACACACGAAATCCCCCTCCTTCCCCACACCTCCTGTGGAGGAAGGCAGGCATaGGCTCTTTCAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: KRTLMQTHEIPLLPHTSCGGRQA*ALSVRA
Trigger: GGCCCTCACTGAAAGAGCCCATGCCTGCCTTCCTCC...ACAGGAGGTGTGGGGAAGGAGGGGGATTTCGTGTGTTTGCATGAGTGTGCGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp CACTGTGGTTGTCCATGGCTCGTTCTGGGTGGAGAGCTCTGCGGCGTAATTGTCGGCAGAGAAGATGGGTaGACGGCCCTGGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: HCGCPWLVLGGELCGVIVGREDG*TALGRT
Trigger: AGTTCTTCCCAGGGCCGTCCACCCATCTTCTCTGCC...GACAATTACGCCGCAGAGCTCTCCACCCAGAACGAGCCATGGACAACCACAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CCA 90 bp CGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGACAGTGACAAGCGTAAGGCAGAGAAGATaGGTGGACGGCCCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RSHSRWYTARGHIMTVTSVRQRR*VDGPGK
Trigger: CTTCCCAGGGCCGTCCACCCATCTTCTCTGCCTTAC...GCTTGTCACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR TCA 90 bp CACACTCTCACTTCAGTGACTGAGCTCAGAAATGGGCATCCAGCTGGTGGGAGGTGTAGCCACGGACACTaGAGTCTAGCCGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: HTLTSVTELRNGHPAGGRCSHGH*SLAAAE
Trigger: CTCTGCAGCGGCTAGACTTCAGTGTCCGTGGCTACA...CCTCCCACCAGCTGGATGCCCATTTCTGAGCTCAGTCACTGAAGTGAGAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR TCA 90 bp GCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGTGGCAAGGTTGCTGGTaGGGTTGGATCCTACAGGAA +
Preference number: 4 (lower is better)
Translates to: AGFSRTYARSHSRWYTARWQGCW*GWILQE
Trigger: TTCCTGTAGGATCCAACCTCACCAGCAACCTTGCCA...CCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp GCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGGGAGGGGTGGTTGGGAGGCCCCTaGCAAGGCCAGCTGAATCAT +
Preference number: 4 (lower is better)
Translates to: ASEHQPGHPAYKYNSGEGWLGGP*QGQLNH
Trigger: ATGATTCAGCTGGCCTTGTCAGGGGCCTCCCAACCA...CCCCTCCCCTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp GAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGGGAGCTGGTGGGAGGGGAGTaGGTGTCCTCTCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: EASEHQPGHPAYKYNSGELVGGE*VSSLRR
Trigger: CCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAG...CTCCCCTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp CACACTCTCACTTCAGTGACTGAGCTCAGAAATGGGCATCCAGCTGGTGGGAGGCTGAGCAACCGAGGGTaGACAAAGCCCCAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: HTLTSVTELRNGHPAGGRLSNRG*TKPQLS
Trigger: TGAGAGCTGGGGCTTTGTGCACCCTCGGTTGCTCAG...CCTCCCACCAGCTGGATGCCCATTTCTGAGCTCAGTCACTGAAGTGAGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000585894.5
CDS-3UTR GCA 90 bp CATGACAGTGACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGGCCCTTCAGCCGCACATATaGTCGATCCCACAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: HDSDKHQVGQQKPRDVAALQPHI*SIPQSV
Trigger: CACCGACTGTGGGATCGAGCATATGTGCGGCTGAAG...GGCCGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTCACTGTCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp CGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGACAGTGACAAGCCTGGGTGGAGAGCTCTaGGGCGTAATTGTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RSHSRWYTARGHIMTVTSLGGEL*GVIVSL
Trigger: GAGAGAGACAATTACGCCGCAGAGCTCTCCACCCAG...GCTTGTCACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp CTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCAACTTCAGCGTCTGAGTaGTCAGAGTCTGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: LQPHICSIPQSVVHSKGPTSASE*SESVMA
Trigger: GGCCATCACAGACTCTGAGCACTCAGACGCTGAAGT...TGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp GGAGCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATTATGGCCCCTGGGATCCGGCAGGCGGAGGCTaGAGTGAGCCGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: GAEQEVRIGGARDYGPWDPAGGG*SEPRLC
Trigger: GCACAATCTCGGCTCACTGCAGCCTCCGCCTGCCGG...ATCCCAGGGGCCATAATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp GCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGGGAGGGGACTTCAGCTACATGGTaGCAGAGCTCGGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: ASEHQPGHPAYKYNSGEGTSATW*QSSGTL
Trigger: CAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGT...CCCCTCCCCTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp AAAGGAGTCTCTGCCTCAGTGGCTCCTAGAACTGGCAGGGTCCAGCTGACTCAGATGGCTCGTTCTGGGTaGAGAGCTCTGCGGCGTAAT +
Preference number: 4 (lower is better)
Translates to: KGVSASVAPRTGRVQLTQMARSG*RALRRN
Trigger: ATTACGCCGCAGAGCTCTCCACCCAGAACGAGCCAT...CTGAGTCAGCTGGACCCTGCCAGTTCTAGGAGCCACTGAGGCAGAGACTCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp ACAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAAAAAGGTCAGTATCCATGGCTCGTTCTGGGTaGAGAGCTCTGCGGCGTAAT +
Preference number: 4 (lower is better)
Translates to: TAEAQGRSGPRQPKRSVSMARSG*RALRRN
Trigger: ATTACGCCGCAGAGCTCTCCACCCAGAACGAGCCAT...GGATACTGACCTTTTTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CATCATGACAGTGACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGTGTCCAGGTCTGAACTaGGGGACCGGAGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: HHDSDKHQVGQQKPRDVACPGLN*GTGGSL
Trigger: GAGGCTTCCTCCGGTCCCCCAGTTCAGACCTGGACA...CGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTCACTGTCATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAAGGCTGATGGCCAGATaGACCCAGGGGTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: QASSRTAEAQGRSGPRQPRLMAR*TQGLSE
Trigger: TTCTGATAACCCCTGGGTCCATCTGGCCATCAGCCT...TGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR CAA 72 bp CCCCCAAAGTACCATCCTGATGGAGAGAAGCCTCCCTaGGGGGAGCACACTCTCACTTCAGTGACTGAGCTC +
Preference number: 4 (lower is better)
Translates to: PPKYHPDGEKPP*GEHTLTSVTEL
Trigger: GAGCTCAGTCACTGAAGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTCTCCATCAGGATGGTACTTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
3UTR CAA 72 bp CTTTGTCGGGCTCAAAAGAGGAGCCCTCGCTCACTCTaGAGCGGCTCAAGATGTTACCAGAAGCTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LCRAQKRSPRSL*SGSRCYQKLPP
Trigger: TGGCGGGAGCTTCTGGTAACATCTTGAGCCGCTCAAGAGTGAGCGAGGGCTCCTCTTTTGAGCCCGACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR TCA 90 bp GGCAGGATCCCTCAGGTACAAGAAACACCTTCCGAAGATTTTGCTCTCCTTCCTAGAGCTCGGGCACGCTaGGCAACCGAGGGTGCACAA +
Preference number: 4 (lower is better)
Translates to: GRIPQVQETPSEDFALLPRARAR*ATEGAQ
Trigger: TTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCT...AGGAAGGAGAGCAAAATCTTCGGAAGGTGTTTCTTGTACCTGAGGGATCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp GAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGGGAGTGTAGCCACGGACACTaGAGTCTAGCCGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: EASEHQPGHPAYKYNSGECSHGH*SLAAAE
Trigger: CTCTGCAGCGGCTAGACTTCAGTGTCCGTGGCTACA...CTCCCCTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAAAAAGGTCAGTATCCCACAGGAGACTTCAGCGTCTaGGTGCTCAGAGTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: QKPRDVAAQDSQKGQYPTGDFSV*VLRVCD
Trigger: ATCACAGACTCTGAGCACTCAGACGCTGAAGTCTCC...TGTGGGATACTGACCTTTTTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp GCCGCTGCAGAGCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTAAACCTAAACCACAGTaGCTCCCAAAAGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: AAAELASAAHMLDPTVGGKPKPQ*LPKGVS
Trigger: AGAGACTCCTTTTGGGAGTCACTGTGGTTTAGGTTT...ACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGCAGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CACCCCTCCCCTCCTCAGTTCACAGTGGAGACTATGGAGATTCAGGGCAGGATCTTCAGTGAGGGCCCCTaGGCACTCATACCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: HPSPPQFTVETMEIQGRIFSEGP*ALIPKS
Trigger: GCTTTTAGGTATGAGTGCTCAGGGGCCCTCACTGAA...GATCCTGCCCTGAATCTCCATAGTCTCCACTGTGAACTGAGGAGGGGAGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp CACACTCTCACTTCAGTGACTGAGCTCAGAAATGGGCATCCAGCTGGTGGGAGGGCTCTAGAGAGGCGATaGAAGGAGGAAGGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: HTLTSVTELRNGHPAGGRALERR*KEEGRH
Trigger: ATGCCTGCCTTCCTCCTTTCATCGCCTCTCTAGAGC...CCTCCCACCAGCTGGATGCCCATTTCTGAGCTCAGTCACTGAAGTGAGAGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR TCA 90 bp GCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGTTATGGCCCCTGGGATaGATGACATGGAGCCATTTG +
Preference number: 4 (lower is better)
Translates to: AGFSRTYARSHSRWYTARLWPLG*MTWSHL
Trigger: CAAATGGCTCCATGTCATTCATCCCAGGGGCCATAA...CCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR TCA 90 bp CTCAGACCTCAAAATACAGAGGTGCTCACTAATCCTCCCAGCCAGCTGATCCCCGCCCTCGCTCACTCTTaGGCGGCTCAAGATGTTACC +
Preference number: 4 (lower is better)
Translates to: LRPQNTEVLTNPPSQLIPALAHS*AAQDVT
Trigger: GGTAACATCTTGAGCCGCTCAAGAGTGAGCGAGGGC...GGGGATCAGCTGGCTGGGAGGATTAGTGAGCACCTCTGTATTTTGAGGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR GCA 90 bp GCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATTATGGCCCCTGGGATGAACACACCAGGGCTGCCTaGACCCGACTCAGCAGAGGC +
Preference number: 4 (lower is better)
Translates to: AEQEVRIGGARDYGPWDEHTRAA*TRLSRG
Trigger: GCCTCTGCTGAGTCGGGTGCAGGCAGCCCTGGTGTG...TTCATCCCAGGGGCCATAATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp AAGCGCACACTCATGCAAACACACGAAATCCCCCTCCTTCCCCACACCTCCTGTCTGGGTGGAGAGCTCTaGGGCGTAATTGTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: KRTLMQTHEIPLLPHTSCLGGEL*GVIVSL
Trigger: GAGAGAGACAATTACGCCGCAGAGCTCTCCACCCAG...ACAGGAGGTGTGGGGAAGGAGGGGGATTTCGTGTGTTTGCATGAGTGTGCGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp AGGCTGGCAAGGTTGCTGGTGAGGTTGGATCCTACAGGAAGAGCACCAAGCAGGACTTCAGCGTCTGAGTaGTCAGAGTCTGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: RLARLLVRLDPTGRAPSRTSASE*SESVMA
Trigger: GGCCATCACAGACTCTGAGCACTCAGACGCTGAAGT...CCTGCTTGGTGCTCTTCCTGTAGGATCCAACCTCACCAGCAACCTTGCCAGCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp CAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAAAAAGGTCAGTATCCCACAGCTGAGTTCTTCCCTTaGCCCATCACCTTAAGTGGG +
Preference number: 4 (lower is better)
Translates to: QKPRDVAAQDSQKGQYPTAEFFP*PITLSG
Trigger: CCCACTTAAGGTGATGGGGCAAGGGAAGAACTCAGC...TGTGGGATACTGACCTTTTTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp CGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGACAGTGACAAGCCTGAGCAACCGAGGGTaGACAAAGCCCCAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: RSHSRWYTARGHIMTVTSLSNRG*TKPQLL
Trigger: TAAAAGCTGGGGCTTTGTGCACCCTCGGTTGCTCAG...GCTTGTCACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp ATGAAAATGGTCCCACTAACCCAGACTTCAGCTACATGGTGGCAGAGCTCGGGCACTTCAGCTACATGGTaGCAGAGCTCGGGCACGCTG +
Preference number: 4 (lower is better)
Translates to: MKMVPLTQTSATWWQSSGTSATW*QSSGTL
Trigger: CAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGT...GCCCGAGCTCTGCCACCATGTAGCTGAAGTCTGGGTTAGTGGGACCATTTTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CCA 90 bp CAGGCCCCAAGAAATGATGGGCTAGATGAGAGGGAGCAGGCCTGTTCTGCAAAACAGACTTCAGCTACATaGTGGCAGAGCTCGGGCACG +
Preference number: 4 (lower is better)
Translates to: QAPRNDGLDEREQACSAKQTSAT*WQSSGT
Trigger: CGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCTG...TTTTGCAGAACAGGCCTGCTCCCTCTCATCTAGCCCATCATTTCTTGGGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp CCACATCATGACAGTGACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTACGATCCCACAGTCGGTaGTACACAGCAAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PHHDSDKHQVGQQKPRDVRSHSR*YTARGH
Trigger: GTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCG...TACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTCACTGTCATGATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR CCA 90 bp CAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAGTCTCTCTCTCTGCTTaGACATCATGTAGCCACGGA +
Preference number: 4 (lower is better)
Translates to: QASSRTAEAQGRSGPRQPVSLSA*TSCSHG
Trigger: TCCGTGGCTACATGATGTCCAAGCAGAGAGAGAGAC...TGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp GGAGCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATTATGGCCCCTGGGATGTCCATGGCTCGTTCTaGGTGGAGAGCTCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: GAEQEVRIGGARDYGPWDVHGSF*VESSAA
Trigger: CGCCGCAGAGCTCTCCACCCAGAACGAGCCATGGAC...ATCCCAGGGGCCATAATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp CTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCATCTTCGCTGTCACTGTaGTTGTCCATGGCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: LQPHICSIPQSVVHSKGPSSLSL*LSMARS
Trigger: AGAACGAGCCATGGACAACCACAGTGACAGCGAAGA...TGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp GAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGGGAGGAGTCTCTGCCTCAGTaGCTCCTAGAACTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: EASEHQPGHPAYKYNSGEESLPQ*LLELAG
Trigger: CCCTGCCAGTTCTAGGAGCCACTGAGGCAGAGACTC...CTCCCCTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp TGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGGGCCCCTTGAAAGATTaGATGTGCCATTGTCTGTAC +
Preference number: 4 (lower is better)
Translates to: WLQPHICSIPQSVVHSKGGPLKD*MCHCLY
Trigger: GTACAGACAATGGCACATTCAATCTTTCAAGGGGCC...CCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATCAGAGGTGTTTGGCCCCTTaGAAGATTGAATGTGCCATT +
Preference number: 4 (lower is better)
Translates to: PAGGRGVSVLSKEASEHQRCLAP*KIECAI
Trigger: AATGGCACATTCAATCTTTCAAGGGGCCAAACACCT...CTGATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp GCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGGGAGGGGTGGCAAGGTTGCTGGTaGGGTTGGATCCTACAGGAA +
Preference number: 4 (lower is better)
Translates to: ASEHQPGHPAYKYNSGEGWQGCW*GWILQE
Trigger: TTCCTGTAGGATCCAACCTCACCAGCAACCTTGCCA...CCCCTCCCCTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CACACTCTCACTTCAGTGACTGAGCTCAGAAATGGGCATCCAGCTGGTGGGAGGTGGCAAGGTTGCTGGTaGGGTTGGATCCTACAGGAA +
Preference number: 4 (lower is better)
Translates to: HTLTSVTELRNGHPAGGRWQGCW*GWILQE
Trigger: TTCCTGTAGGATCCAACCTCACCAGCAACCTTGCCA...CCTCCCACCAGCTGGATGCCCATTTCTGAGCTCAGTCACTGAAGTGAGAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR TCA 90 bp ATCCAGGCCAGCAGGATCCATATTAATGGAAGGGAAGTCTGGAAGGTCTCTGGCTGGTTGGGAGGCCCCTaGCAAGGCCAGCTGAATCAT +
Preference number: 4 (lower is better)
Translates to: IQASRIHINGREVWKVSGWLGGP*QGQLNH
Trigger: ATGATTCAGCTGGCCTTGTCAGGGGCCTCCCAACCA...GCCAGAGACCTTCCAGACTTCCCTTCCATTAATATGGATCCTGCTGGCCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATCAGAAACCTAAACCACAGTaGCTCCCAAAAGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PAGGRGVSVLSKEASEHQKPKPQ*LPKGVS
Trigger: AGAGACTCCTTTTGGGAGTCACTGTGGTTTAGGTTT...CTGATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CCCACTACTAAGGAGGCTGAGGCAGGAGAACCTCTTCAACCTGGAAGGCAGACGTCTCACTTCAGTGACTaGGCTCAGAAATGGGCATCC +
Preference number: 4 (lower is better)
Translates to: PTTKEAEAGEPLQPGRQTSHFSD*AQKWAS
Trigger: GGATGCCCATTTCTGAGCTCAGTCACTGAAGTGAGA...CGTCTGCCTTCCAGGTTGAAGAGGTTCTCCTGCCTCAGCCTCCTTAGTAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp CCACATCATGACAGTGACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTACATGGGCTCTTTCAGTaGGGGCCCCTGAGCACTCAT +
Preference number: 4 (lower is better)
Translates to: PHHDSDKHQVGQQKPRDVHGLFQ*GPLSTH
Trigger: ATGAGTGCTCAGGGGCCCTCACTGAAAGAGCCCATG...TACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTCACTGTCATGATGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR TCA 90 bp CAGGCCCCAAGAAATGATGGGCTAGATGAGAGGGAGCAGGCCTGTTCTGCAAAAGGCAGTCAGCTCACTTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: QAPRNDGLDEREQACSAKGSQLT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAAGTGAGCTGACTGCC...TTTTGCAGAACAGGCCTGCTCCCTCTCATCTAGCCCATCATTTCTTGGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp GAGAAGCCTCCCTTGGGGGAGCACACTCTCACTTCAGTGACTGAGCTCAGAAATGCCTGGCCAGCACGGTaGAACCCCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: EKPPLGEHTLTSVTELRNAWPAR*NPISTK
Trigger: TTTAGTAGAGATGGGGTTTCACCGTGCTGGCCAGGC...ATTTCTGAGCTCAGTCACTGAAGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp TTCAACCTGGAAGGCAGACGTTGCAGAAAGCCAAGATCACACCACTGCACTCCACAGAAGCGTTTGGCTTaGGCTCTGCTTGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FNLEGRRCRKPRSHHCTPQKRLA*ALLGEA
Trigger: TGCCTCCCCAAGCAGAGCTCAAGCCAAACGCTTCTG...TGGAGTGCAGTGGTGTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp CGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGACAGTGACAAGCCTGACCACCCCACTATaGGTGACTATGAGACACCTA +
Preference number: 4 (lower is better)
Translates to: RSHSRWYTARGHIMTVTSLTTPL*VTMRHL
Trigger: TAGGTGTCTCATAGTCACTCATAGTGGGGTGGTCAG...GCTTGTCACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR TCA 90 bp CAGGCCCCAAGAAATGATGGGCTAGATGAGAGGGAGCAGGCCTGTTCTGCAAAACCAACTCCCAAGGCCTaGAGCGCACACTCATGCAAA +
Preference number: 4 (lower is better)
Translates to: QAPRNDGLDEREQACSAKPTPKA*SAHSCK
Trigger: TTTGCATGAGTGTGCGCTTCAGGCCTTGGGAGTTGG...TTTTGCAGAACAGGCCTGCTCCCTCTCATCTAGCCCATCATTTCTTGGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp CCGAAGATTAACTACACAGCTCCAGAAGACTCAGACCTCAAAATACAGAGGTGCCTCCCACACCAGGGCTaGCTGCACCCGACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PKINYTAPEDSDLKIQRCLPHQG*LHPTQQ
Trigger: CTGCTGAGTCGGGTGCAGGCAGCCCTGGTGTGGGAG...GCACCTCTGTATTTTGAGGTCTGAGTCTTCTGGAGCTGTGTAGTTAATCTTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp CTCAGACCTCAAAATACAGAGGTGCTCACTAATCCTCCCAGCCAGCTGATCCCCCTTCAGCCGCACATATaGTCGATCCCACAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: LRPQNTEVLTNPPSQLIPLQPHI*SIPQSV
Trigger: CACCGACTGTGGGATCGAGCATATGTGCGGCTGAAG...GGGGATCAGCTGGCTGGGAGGATTAGTGAGCACCTCTGTATTTTGAGGTCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp TCAGTTCACAGTGGAGACTATGGAGATTCAGGGCAGGATCCCTCAGGTACAAGACTGAAGTCTAGCCGCTaGAGAGCTGGCTTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SVHSGDYGDSGQDPSGTRLKSSR*RAGFSR
Trigger: GCGGCTGAAGCCAGCTCTGCAGCGGCTAGACTTCAG...TCTTGTACCTGAGGGATCCTGCCCTGAATCTCCATAGTCTCCACTGTGAACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp ATGAAAATGGTCCCACTAACCCAGACTTCAGCTACATGGTGGCAGAGCTCGGGCCTGGGTGGAGAGCTCTaGGGCGTAATTGTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: MKMVPLTQTSATWWQSSGLGGEL*GVIVSL
Trigger: GAGAGAGACAATTACGCCGCAGAGCTCTCCACCCAG...GCCCGAGCTCTGCCACCATGTAGCTGAAGTCTGGGTTAGTGGGACCATTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR GCA 90 bp TCAGTTCACAGTGGAGACTATGGAGATTCAGGGCAGGATCCCTCAGGTACAAGAGAGGAAGCCTCTCGTTaGTCTCTGGGCAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SVHSGDYGDSGQDPSGTREEASR*SLGRCS
Trigger: GGAGCACCTGCCCAGAGAGCAACGAGAGGCTTCCTC...TCTTGTACCTGAGGGATCCTGCCCTGAATCTCCATAGTCTCCACTGTGAACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp CATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAAAAAGCTGAGTTCTTCCCTTaGCCCATCACCTTAAGTGGG +
Preference number: 4 (lower is better)
Translates to: HQVGQQKPRDVAAQDSQKAEFFP*PITLSG
Trigger: CCCACTTAAGGTGATGGGGCAAGGGAAGAACTCAGC...TTTTTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp CACACTCTCACTTCAGTGACTGAGCTCAGAAATGGGCATCCAGCTGGTGGGAGGTGTAACTACTCCAGCTaGTGCCTGACTTTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: HTLTSVTELRNGHPAGGRCNYSS*CLTLGA
Trigger: AGCCCCCAAAGTCAGGCAGCAGCTGGAGTAGTTACA...CCTCCCACCAGCTGGATGCCCATTTCTGAGCTCAGTCACTGAAGTGAGAGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR GCA 90 bp GAGAAGCCTCCCTTGGGGGAGCACACTCTCACTTCAGTGACTGAGCTCAGAAATGTTTGGCTTGAGCTCTaGTTGGGGAGGCAGAGGCTA +
Preference number: 4 (lower is better)
Translates to: EKPPLGEHTLTSVTELRNVWLEL*LGRQRL
Trigger: TAGCCTCTGCCTCCCCAAGCAGAGCTCAAGCCAAAC...ATTTCTGAGCTCAGTCACTGAAGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp CTAAGGAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGCGATCCCACAGTCGGTaGTACACAGCAAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: LRRPLSISQATQHTNIIQRSHSR*YTARGH
Trigger: GTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCG...CTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAAAAAGGTCAGTATCCCACAGTCTCTCTCTCTGCTTaGACATCATGTAGCCACGGA +
Preference number: 4 (lower is better)
Translates to: QKPRDVAAQDSQKGQYPTVSLSA*TSCSHG
Trigger: TCCGTGGCTACATGATGTCCAAGCAGAGAGAGAGAC...TGTGGGATACTGACCTTTTTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp ACAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAAAAAGGTCAGTATCCGTCTCTCTCTCTGCTTaGACATCATGTAGCCACGGA +
Preference number: 4 (lower is better)
Translates to: TAEAQGRSGPRQPKRSVSVSLSA*TSCSHG
Trigger: TCCGTGGCTACATGATGTCCAAGCAGAGAGAGAGAC...GGATACTGACCTTTTTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000585726.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CTCTGCGGCGTAATTGTCTCTCTCTCTGCTTGGACATCATGTAGCCACGGACACCACTGTGGTTGTCCATaGCTCGTTCTGGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LCGVIVSLSAWTSCSHGHHCGCP*LVLGGE
Trigger: CTCTCCACCCAGAACGAGCCATGGACAACCACAGTG...GTGTCCGTGGCTACATGATGTCCAAGCAGAGAGAGAGACAATTACGCCGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATTCTTCGCTGTCACTGTaGTTGTCCATGGCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: PHICSIPQSVVHSKGPHHSSLSL*LSMARS
Trigger: AGAACGAGCCATGGACAACCACAGTGACAGCGAAGA...ATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp GCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAAAAAGGTCAGTATCCCACAGTCTGGAAGGTCTCTaGCAAAGGATTCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: AEAQGRSGPRQPKRSVSHSLEGL*QRIPLD
Trigger: ATCCAGAGGAATCCTTTGCCAGAGACCTTCCAGACT...GTGGGATACTGACCTTTTTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CTAAGGAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGTGTCCAGGTCTGAACTaGGGGACCGGAGGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: LRRPLSISQATQHTNIIQCPGLN*GTGGSL
Trigger: GAGGCTTCCTCCGGTCCCCCAGTTCAGACCTGGACA...CTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTCCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp GAGAAGCCTCCCTTGGGGGAGCACACTCTCACTTCAGTGACTGAGCTCAGAAATGAGAGAAGCCTCCCTTaGGGGAGCACACTCTCACTT +
Preference number: 4 (lower is better)
Translates to: EKPPLGEHTLTSVTELRNERSLP*GSTLSL
Trigger: AAGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTCTC...ATTTCTGAGCTCAGTCACTGAAGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CCA 90 bp TGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGACAGTGACTCACAAGCAATACTTTaGACCACTGGGGTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: CSIPQSVVHSKGPHHDSDSQAIL*TTGVQA
Trigger: GGCCTGAACCCCAGTGGTCCAAAGTATTGCTTGTGA...GTCACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CCA 90 bp ATGAAAATGGTCCCACTAACCCAGACTTCAGCTACATGGTGGCAGAGCTCGGGCGGCTTGAGCTCTGCTTaGGGAGGCAGAGGCTATAGA +
Preference number: 4 (lower is better)
Translates to: MKMVPLTQTSATWWQSSGGLSSA*GGRGYR
Trigger: TCTATAGCCTCTGCCTCCCCAAGCAGAGCTCAAGCC...GCCCGAGCTCTGCCACCATGTAGCTGAAGTCTGGGTTAGTGGGACCATTTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CCA 90 bp CATCCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATACCATTTTCACTCCCTaGCCTCTGTACCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HPAGGRGVSVLSKEASEHTIFTP*PLYLLH
Trigger: ATGGAGAAGGTACAGAGGCCAGGGAGTGAAAATGGT...ATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp TCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACACTCCTCAGTTCACAGTaGAGACTATGGAGATTCAGG +
Preference number: 4 (lower is better)
Translates to: SAAHMLDPTVGGTQQGATLLSSQ*RLWRFR
Trigger: CCTGAATCTCCATAGTCTCCACTGTGAACTGAGGAG...TGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CCA 90 bp CAGGCCCCAAGAAATGATGGGCTAGATGAGAGGGAGCAGGCCTGTTCTGCAAAAGCAGGCGGGATGGAGTaGAAGGAGGTGAGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: QAPRNDGLDEREQACSAKAGGME*KEVRQN
Trigger: ATTTTGCCTCACCTCCTTCCACTCCATCCCGCCTGC...TTTTGCAGAACAGGCCTGCTCCCTCTCATCTAGCCCATCATTTCTTGGGGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR TCA 90 bp ATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTAGAGCTCGGGCACGCTaGGCAACCGAGGGTGCACAA +
Preference number: 4 (lower is better)
Translates to: IPKSKQQHLLKGEPISLTRARAR*ATEGAQ
Trigger: TTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCT...AGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR TCA 90 bp GGCAGGATCCCTCAGGTACAAGAAACACCTTCCGAAGATTTTGCTCTCCTTCCTTGTAGCCACGGACACTaGAGTCTAGCCGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GRIPQVQETPSEDFALLPCSHGH*SLAAAE
Trigger: CTCTGCAGCGGCTAGACTTCAGTGTCCGTGGCTACA...AGGAAGGAGAGCAAAATCTTCGGAAGGTGTTTCTTGTACCTGAGGGATCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp GAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGGGAGGGAGACTTCAGCGTCTaGGTGCTCAGAGTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: EASEHQPGHPAYKYNSGEGDFSV*VLRVCD
Trigger: ATCACAGACTCTGAGCACTCAGACGCTGAAGTCTCC...CTCCCCTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CTCAGACCTCAAAATACAGAGGTGCTCACTAATCCTCCCAGCCAGCTGATCCCCGGAGACTTCAGCGTCTaGGTGCTCAGAGTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: LRPQNTEVLTNPPSQLIPGDFSV*VLRVCD
Trigger: ATCACAGACTCTGAGCACTCAGACGCTGAAGTCTCC...GGGGATCAGCTGGCTGGGAGGATTAGTGAGCACCTCTGTATTTTGAGGTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp CTGCTTGGGGAGGCAGAGGCTATAGACTGGCACAGGTTTAGAATCAAGTACCATTGGTTGGGAGGCCCCTaGCAAGGCCAGCTGAATCAT +
Preference number: 4 (lower is better)
Translates to: LLGEAEAIDWHRFRIKYHWLGGP*QGQLNH
Trigger: ATGATTCAGCTGGCCTTGTCAGGGGCCTCCCAACCA...ATGGTACTTGATTCTAAACCTGTGCCAGTCTATAGCCTCTGCCTCCCCAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp CTGCTTGGGGAGGCAGAGGCTATAGACTGGCACAGGTTTAGAATCAAGTACCATATCAGTGTCCAGGTCTaGACTGGGGGACCGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LLGEAEAIDWHRFRIKYHISVQV*TGGPEE
Trigger: TTCCTCCGGTCCCCCAGTTCAGACCTGGACACTGAT...ATGGTACTTGATTCTAAACCTGTGCCAGTCTATAGCCTCTGCCTCCCCAAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp CTCATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGCTGGTGGGAGGGGAGTaGGTGTCCTCTCTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LIPKSKQQHLLKGEPISLLVGGE*VSSLRR
Trigger: CCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAG...CAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR TCA 90 bp GAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGGGAGTTCAGTGAGGGCCCCTaGGCACTCATACCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: EASEHQPGHPAYKYNSGEFSEGP*ALIPKS
Trigger: GCTTTTAGGTATGAGTGCTCAGGGGCCCTCACTGAA...CTCCCCTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR TCA 90 bp GAGAAGCCTCCCTTGGGGGAGCACACTCTCACTTCAGTGACTGAGCTCAGAAATTTCAGTGAGGGCCCCTaGGCACTCATACCTAAAAGC +
Preference number: 4 (lower is better)
Translates to: EKPPLGEHTLTSVTELRNFSEGP*ALIPKS
Trigger: GCTTTTAGGTATGAGTGCTCAGGGGCCCTCACTGAA...ATTTCTGAGCTCAGTCACTGAAGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR GCA 90 bp CTGCTTGGGGAGGCAGAGGCTATAGACTGGCACAGGTTTAGAATCAAGTACCATCTGAGCAACCGAGGGTaGACAAAGCCCCAGCTCTCA +
Preference number: 4 (lower is better)
Translates to: LLGEAEAIDWHRFRIKYHLSNRG*TKPQLS
Trigger: TGAGAGCTGGGGCTTTGTGCACCCTCGGTTGCTCAG...ATGGTACTTGATTCTAAACCTGTGCCAGTCTATAGCCTCTGCCTCCCCAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309428.10
CDS-3UTR GCA 90 bp CCCACTACTAAGGAGGCTGAGGCAGGAGAACCTCTTCAACCTGGAAGGCAGACGGGAGCAGGCCTGTTCTaGAAAACCAAAGGACAAGTT +
Preference number: 4 (lower is better)
Translates to: PTTKEAEAGEPLQPGRQTGAGLF*KTKGQV
Trigger: AACTTGTCCTTTGGTTTTGCAGAACAGGCCTGCTCC...CGTCTGCCTTCCAGGTTGAAGAGGTTCTCCTGCCTCAGCCTCCTTAGTAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp CCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGGAGCAGGCCTGTTCTaGAAAACCAAAGGACAAGTT +
Preference number: 4 (lower is better)
Translates to: PHICSIPQSVVHSKGPHHGAGLF*KTKGQV
Trigger: AACTTGTCCTTTGGTTTTGCAGAACAGGCCTGCTCC...ATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR GCA 90 bp GGAGACCAGGCTGGCAAGGTTGCTGGTGAGGTTGGATCCTACAGGAAGAGCACCTCCCCCATGAATTATTaGTTCTCCAAAGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: GDQAGKVAGEVGSYRKSTSPMNY*FSKGGA
Trigger: TGCTCCTCCTTTGGAGAAGCAATAATTCATGGGGGA...GGTGCTCTTCCTGTAGGATCCAACCTCACCAGCAACCTTGCCAGCCTGGTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CCA 90 bp AGATTGAATGTGCCATTGTCTGTACAGGAGACTTCAGCGTCTGAGTGCTCAGAGCGATCCCACAGTCGGTaGTACACAGCAAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: RLNVPLSVQETSASECSERSHSR*YTARGH
Trigger: GTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCG...CTCTGAGCACTCAGACGCTGAAGTCTCCTGTACAGACAATGGCACATTCAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp ATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTGTCCATGGCTCGTTCTaGGTGGAGAGCTCTGCGGCG +
Preference number: 4 (lower is better)
Translates to: IPKSKQQHLLKGEPISLTVHGSF*VESSAA
Trigger: CGCCGCAGAGCTCTCCACCCAGAACGAGCCATGGAC...AGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CCA 90 bp AAGCGCACACTCATGCAAACACACGAAATCCCCCTCCTTCCCCACACCTCCTGTTCTTCGCTGTCACTGTaGTTGTCCATGGCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: KRTLMQTHEIPLLPHTSCSSLSL*LSMARS
Trigger: AGAACGAGCCATGGACAACCACAGTGACAGCGAAGA...ACAGGAGGTGTGGGGAAGGAGGGGGATTTCGTGTGTTTGCATGAGTGTGCGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp AATAAAAGCTGTAAAGGAGCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATCAGCCTCGTCCCGGCTaGCAGGTGGGGCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: NKSCKGAEQEVRIGGARDQPRPG*QVGPGA
Trigger: AGCCCCAGGCCCCACCTGCCAGCCGGGACGAGGCTG...ATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGCTCCTTTACAGCTTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp TGCAGAGCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAAATACTTTGGACCACTaGGGTTCAGGCCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: CRAGFSRTYARSHSRWYTNTLDH*GSGPKK
Trigger: TTTCTTGGGGCCTGAACCCCAGTGGTCCAAAGTATT...TGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CCA 90 bp ACAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAAAAAGGTCAGTATCCACCATTTTCACTCCCTaGCCTCTGTACCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: TAEAQGRSGPRQPKRSVSTIFTP*PLYLLH
Trigger: ATGGAGAAGGTACAGAGGCCAGGGAGTGAAAATGGT...GGATACTGACCTTTTTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CCA 90 bp GGGCCACATCATGACAGTGACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACTCACAGTGGAGACTATaGAGATTCAGGGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: GPHHDSDKHQVGQQKPRDSQWRL*RFRAGS
Trigger: GGATCCTGCCCTGAATCTCCATAGTCTCCACTGTGA...GTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTCACTGTCATGATGTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CCA 90 bp CACCCCTCCCCTCCTCAGTTCACAGTGGAGACTATGGAGATTCAGGGCAGGATCCTCCTCAGTTCACAGTaGAGACTATGGAGATTCAGG +
Preference number: 4 (lower is better)
Translates to: HPSPPQFTVETMEIQGRILLSSQ*RLWRFR
Trigger: CCTGAATCTCCATAGTCTCCACTGTGAACTGAGGAG...GATCCTGCCCTGAATCTCCATAGTCTCCACTGTGAACTGAGGAGGGGAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp CGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGACAGTGACAAGCAGGTGTTTGGCCCCTTaGAAGATTGAATGTGCCATT +
Preference number: 4 (lower is better)
Translates to: RSHSRWYTARGHIMTVTSRCLAP*KIECAI
Trigger: AATGGCACATTCAATCTTTCAAGGGGCCAAACACCT...GCTTGTCACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp AGGCTGGCAAGGTTGCTGGTGAGGTTGGATCCTACAGGAAGAGCACCAAGCAGGAAACCTAAACCACAGTaGCTCCCAAAAGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: RLARLLVRLDPTGRAPSRKPKPQ*LPKGVS
Trigger: AGAGACTCCTTTTGGGAGTCACTGTGGTTTAGGTTT...CCTGCTTGGTGCTCTTCCTGTAGGATCCAACCTCACCAGCAACCTTGCCAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp GAGAAGCCTCCCTTGGGGGAGCACACTCTCACTTCAGTGACTGAGCTCAGAAATTCTCACTTCAGTGACTaGGCTCAGAAATGGGCATCC +
Preference number: 4 (lower is better)
Translates to: EKPPLGEHTLTSVTELRNSHFSD*AQKWAS
Trigger: GGATGCCCATTTCTGAGCTCAGTCACTGAAGTGAGA...ATTTCTGAGCTCAGTCACTGAAGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CCCACTACTAAGGAGGCTGAGGCAGGAGAACCTCTTCAACCTGGAAGGCAGACGGGGAACCAATATCCCTaGCTATTTTGTTCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: PTTKEAEAGEPLQPGRQTGNQYP*LFCSPK
Trigger: TTTGGGGGAACAAAATAGTCAGGGATATTGGTTCCC...CGTCTGCCTTCCAGGTTGAAGAGGTTCTCCTGCCTCAGCCTCCTTAGTAGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp CTGCTTGGGGAGGCAGAGGCTATAGACTGGCACAGGTTTAGAATCAAGTACCATGCTCTAGAGAGGCGATaGAAGGAGGAAGGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LLGEAEAIDWHRFRIKYHALERR*KEEGRH
Trigger: ATGCCTGCCTTCCTCCTTTCATCGCCTCTCTAGAGC...ATGGTACTTGATTCTAAACCTGTGCCAGTCTATAGCCTCTGCCTCCCCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp ATGCTAGTGTCGTCCTCATCATCCAGGCCAGCAGGATCCATATTAATGGAAGGGGCTCTAGAGAGGCGATaGAAGGAGGAAGGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: MLVSSSSSRPAGSILMEGALERR*KEEGRH
Trigger: ATGCCTGCCTTCCTCCTTTCATCGCCTCTCTAGAGC...CCCTTCCATTAATATGGATCCTGCTGGCCTGGATGATGAGGACGACACTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR TCA 90 bp CTGAGGCAGGAGAACCTCTTCAACCTGGAAGGCAGACGTTGCAGAAAGCCAAGACTGACCACCCCACTATaGGTGACTATGAGACACCTA +
Preference number: 4 (lower is better)
Translates to: LRQENLFNLEGRRCRKPRLTTPL*VTMRHL
Trigger: TAGGTGTCTCATAGTCACTCATAGTGGGGTGGTCAG...TCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTTGAAGAGGTTCTCCTGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp CCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTATTGAGGAAGCCTCTCGTTaGTCTCTGGGCAGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: PKSKQQHLLKGEPISLTIEEASR*SLGRCS
Trigger: GGAGCACCTGCCCAGAGAGCAACGAGAGGCTTCCTC...AATAGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR GCA 90 bp CTGAGGCAGGAGAACCTCTTCAACCTGGAAGGCAGACGTTGCAGAAAGCCAAGAGATTTCACTAGGGGCTaGAGAACAGATACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LRQENLFNLEGRRCRKPRDFTRG*RTDTPQ
Trigger: CTGAGGGGTATCTGTTCTGCAGCCCCTAGTGAAATC...TCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTTGAAGAGGTTCTCCTGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp AATAAAAGCTGTAAAGGAGCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATCCGGGCCTGGGGTCGTaGGAACCCCTTCGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: NKSCKGAEQEVRIGGARDPGLGS*EPLRPQ
Trigger: CTGAGGCCGAAGGGGTTCCCACGACCCCAGGCCCGG...ATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGCTCCTTTACAGCTTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp CTGCTTGGGGAGGCAGAGGCTATAGACTGGCACAGGTTTAGAATCAAGTACCATCACTGTGGTTGTCCATaGCTCGTTCTGGGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LLGEAEAIDWHRFRIKYHHCGCP*LVLGGE
Trigger: CTCTCCACCCAGAACGAGCCATGGACAACCACAGTG...ATGGTACTTGATTCTAAACCTGTGCCAGTCTATAGCCTCTGCCTCCCCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp TGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGTCCGTTAGAGGTGTTTaGCCCCTTGAAAGATTGAAT +
Preference number: 4 (lower is better)
Translates to: WLQPHICSIPQSVVHSKGSVRGV*PLERLN
Trigger: ATTCAATCTTTCAAGGGGCCAAACACCTCTAACGGA...CCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CACACTCTCACTTCAGTGACTGAGCTCAGAAATGGGCATCCAGCTGGTGGGAGGAGTCTGGAAGGTCTCTaGCAAAGGATTCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: HTLTSVTELRNGHPAGGRSLEGL*QRIPLD
Trigger: ATCCAGAGGAATCCTTTGCCAGAGACCTTCCAGACT...CCTCCCACCAGCTGGATGCCCATTTCTGAGCTCAGTCACTGAAGTGAGAGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CCA 90 bp GCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGGGAGGGGAATGGAAGGGAAGTCTaGAAGGTCTCTGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: ASEHQPGHPAYKYNSGEGNGREV*KVSGKG
Trigger: TCCTTTGCCAGAGACCTTCCAGACTTCCCTTCCATT...CCCCTCCCCTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp AGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTATTTTGTTCGGGCTCCTCAGCCCCTaGCGGAGAACGGTACATCAA +
Preference number: 4 (lower is better)
Translates to: SKQQHLLKGEPISLTILFGLLSP*RRTVHQ
Trigger: TTGATGTACCGTTCTCCGCCAGGGGCTGAGGAGCCC...GAACAAAATAGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CTAAGGAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGAGAGAAGCCTCCCTTaGGGGAGCACACTCTCACTT +
Preference number: 4 (lower is better)
Translates to: LRRPLSISQATQHTNIIQERSLP*GSTLSL
Trigger: AAGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTCTC...CTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTCCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CCA 90 bp ATGCTAGTGTCGTCCTCATCATCCAGGCCAGCAGGATCCATATTAATGGAAGGGGAGAGAAGCCTCCCTTaGGGGAGCACACTCTCACTT +
Preference number: 4 (lower is better)
Translates to: MLVSSSSSRPAGSILMEGERSLP*GSTLSL
Trigger: AAGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTCTC...CCCTTCCATTAATATGGATCCTGCTGGCCTGGATGATGAGGACGACACTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CCA 90 bp AGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTATTTTGTTCGGAGGAAGGCAGGCATaGGCTCTTTCAGTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SKQQHLLKGEPISLTILFGGRQA*ALSVRA
Trigger: GGCCCTCACTGAAAGAGCCCATGCCTGCCTTCCTCC...GAACAAAATAGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CCA 90 bp GCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGGGAGGGGAATACTTTGGACCACTaGGGTTCAGGCCCCAAGAAA +
Preference number: 4 (lower is better)
Translates to: ASEHQPGHPAYKYNSGEGNTLDH*GSGPKK
Trigger: TTTCTTGGGGCCTGAACCCCAGTGGTCCAAAGTATT...CCCCTCCCCTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp GGAGAGAAGCCTCCCTTGGGGGAGCACACTCTCACTTCAGTGACTGAGCTCAGAGCAGAGGCTATAGACTaGCACAGGTTTAGAATCAAG +
Preference number: 4 (lower is better)
Translates to: GEKPPLGEHTLTSVTELRAEAID*HRFRIK
Trigger: CTTGATTCTAAACCTGTGCCAGTCTATAGCCTCTGC...TCTGAGCTCAGTCACTGAAGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp GGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCGATCAATACACACAATaGTCATCAAGCCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: GFSRTYARSHSRWYTARGDQYTQ*SSSQMQ
Trigger: TTGCATTTGGCTTGATGATCATTGTGTGTATTGATC...GCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTATTATCAGTGTCCAGGTCTaGACTGGGGGACCGGAGGAA +
Preference number: 4 (lower is better)
Translates to: PKSKQQHLLKGEPISLTIISVQV*TGGPEE
Trigger: TTCCTCCGGTCCCCCAGTTCAGACCTGGACACTGAT...AATAGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR TCA 90 bp GCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGGGAGGGGGGGAACCAATATCCCTaGCTATTTTGTTCCCCCAAA +
Preference number: 4 (lower is better)
Translates to: ASEHQPGHPAYKYNSGEGGNQYP*LFCSPK
Trigger: TTTGGGGGAACAAAATAGTCAGGGATATTGGTTCCC...CCCCTCCCCTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR GCA 90 bp CTCATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGCTTCAGCCGCACATATaGTCGATCCCACAGTCGGTG +
Preference number: 4 (lower is better)
Translates to: LIPKSKQQHLLKGEPISLLQPHI*SIPQSV
Trigger: CACCGACTGTGGGATCGAGCATATGTGCGGCTGAAG...CAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR GCA 90 bp CTCATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGCTGGGTGGAGAGCTCTaGGGCGTAATTGTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LIPKSKQQHLLKGEPISLLGGEL*GVIVSL
Trigger: GAGAGAGACAATTACGCCGCAGAGCTCTCCACCCAG...CAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR GCA 90 bp CTAAGGAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGCTGAGTTCTTCCCTTaGCCCATCACCTTAAGTGGG +
Preference number: 4 (lower is better)
Translates to: LRRPLSISQATQHTNIIQAEFFP*PITLSG
Trigger: CCCACTTAAGGTGATGGGGCAAGGGAAGAACTCAGC...CTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTCCTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR GCA 90 bp TCAGTTCACAGTGGAGACTATGGAGATTCAGGGCAGGATCCCTCAGGTACAAGATGTAACTACTCCAGCTaGTGCCTGACTTTGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SVHSGDYGDSGQDPSGTRCNYSS*CLTLGA
Trigger: AGCCCCCAAAGTCAGGCAGCAGCTGGAGTAGTTACA...TCTTGTACCTGAGGGATCCTGCCCTGAATCTCCATAGTCTCCACTGTGAACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp TTCAACCTGGAAGGCAGACGTTGCAGAAAGCCAAGATCACACCACTGCACTCCACTGGAAGGCAGACGTTaGAGAAAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: FNLEGRRCRKPRSHHCTPLEGRR*RKPRSH
Trigger: GTGTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAG...TGGAGTGCAGTGGTGTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp AAGCGCACACTCATGCAAACACACGAAATCCCCCTCCTTCCCCACACCTCCTGTAGTATGGTATTGCTTTaGTCACTGCTGAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: KRTLMQTHEIPLLPHTSCSMVLL*SLLRLM
Trigger: CATCAGCCTCAGCAGTGAGCAAAGCAATACCATACT...ACAGGAGGTGTGGGGAAGGAGGGGGATTTCGTGTGTTTGCATGAGTGTGCGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp TCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGACAGTGACAAGAGTATGGTATTGCTTTaGTCACTGCTGAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: SIPQSVVHSKGPHHDSDKSMVLL*SLLRLM
Trigger: CATCAGCCTCAGCAGTGAGCAAAGCAATACCATACT...CTTGTCACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR GCA 90 bp AAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAAGAGCCATTTGTAAAGTaGTACTGTATCATCCCCCAT +
Preference number: 4 (lower is better)
Translates to: KHQVGQQKPRDVAAQDSQEPFVK*YCIIPH
Trigger: ATGGGGGATGATACAGTAGCACTTTACAAATGGCTC...TTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CCA 90 bp AGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTATTTTGTTCCAGACTTCAGCTACATaGTGGCAGAGCTCGGGCACG +
Preference number: 4 (lower is better)
Translates to: SKQQHLLKGEPISLTILFQTSAT*WQSSGT
Trigger: CGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCTG...GAACAAAATAGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CCA 90 bp AAATTTCACAAGCAATACTTTGGACCACTGGGGTTCAGGCCCCAAGAAATGATGCGATCCCACAGTCGGTaGTACACAGCAAGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: KFHKQYFGPLGFRPQEMMRSHSR*YTARGH
Trigger: GTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCG...CATCATTTCTTGGGGCCTGAACCCCAGTGGTCCAAAGTATTGCTTGTGAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp GAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGGGAGAATGGAAGGGAAGTCTaGAAGGTCTCTGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: EASEHQPGHPAYKYNSGENGREV*KVSGKG
Trigger: TCCTTTGCCAGAGACCTTCCAGACTTCCCTTCCATT...CTCCCCTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp TATGGAGATTCAGGGCAGGATCCCTCAGGTACAAGAAACACCTTCCGAAGATTTGAGTCTCTGCCTCAGTaGCTCCTAGAACTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: YGDSGQDPSGTRNTFRRFESLPQ*LLELAG
Trigger: CCCTGCCAGTTCTAGGAGCCACTGAGGCAGAGACTC...AAATCTTCGGAAGGTGTTTCTTGTACCTGAGGGATCCTGCCCTGAATCTCCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp TTCAACCTGGAAGGCAGACGTTGCAGAAAGCCAAGATCACACCACTGCACTCCATCACAAGCAATACTTTaGACCACTGGGGTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: FNLEGRRCRKPRSHHCTPSQAIL*TTGVQA
Trigger: GGCCTGAACCCCAGTGGTCCAAAGTATTGCTTGTGA...TGGAGTGCAGTGGTGTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp GGGCCACATCATGACAGTGACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGCAGAGGCTATAGACTaGCACAGGTTTAGAATCAAG +
Preference number: 4 (lower is better)
Translates to: GPHHDSDKHQVGQQKPRDAEAID*HRFRIK
Trigger: CTTGATTCTAAACCTGTGCCAGTCTATAGCCTCTGC...GTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTCACTGTCATGATGTGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589797.5
3UTR CAA 72 bp GTTAATGCAGAAGGAAAGAGGACAGAAGCGTTTGGCTaGAGCTCTGCTTGGGGAGGCAGAGGCTATAGACTG +
Preference number: 4 (lower is better)
Translates to: VNAEGKRTEAFG*SSAWGGRGYRL
Trigger: CAGTCTATAGCCTCTGCCTCCCCAAGCAGAGCTCAAGCCAAACGCTTCTGTCCTCTTTCCTTCTGCATTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp GCTGCAGAGCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTACAGATCAATACACACAATaGTCATCAAGCCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: AAELASAAHMLDPTVGGTDQYTQ*SSSQMQ
Trigger: TTGCATTTGGCTTGATGATCATTGTGTGTATTGATC...TGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CAGGCCCCAAGAAATGATGGGCTAGATGAGAGGGAGCAGGCCTGTTCTGCAAAAAGGTGTTTGGCCCCTTaGAAGATTGAATGTGCCATT +
Preference number: 4 (lower is better)
Translates to: QAPRNDGLDEREQACSAKRCLAP*KIECAI
Trigger: AATGGCACATTCAATCTTTCAAGGGGCCAAACACCT...TTTTGCAGAACAGGCCTGCTCCCTCTCATCTAGCCCATCATTTCTTGGGGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp TGGCCAGATGGACCCAGGGGTTATCAGAAACCGAAGATTAACTACACAGCTCCATCTCACTTCAGTGACTaGGCTCAGAAATGGGCATCC +
Preference number: 4 (lower is better)
Translates to: WPDGPRGYQKPKINYTAPSHFSD*AQKWAS
Trigger: GGATGCCCATTTCTGAGCTCAGTCACTGAAGTGAGA...TGGAGCTGTGTAGTTAATCTTCGGTTTCTGATAACCCCTGGGTCCATCTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp ATCAGAAACCGAAGATTAACTACACAGCTCCAGAAGACTCAGACCTCAAAATACAGGCGGAGGCTGCAGTaGGCCGAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: IRNRRLTTQLQKTQTSKYRRRLQ*AEIVPL
Trigger: CAGTGGCACAATCTCGGCTCACTGCAGCCTCCGCCT...GTATTTTGAGGTCTGAGTCTTCTGGAGCTGTGTAGTTAATCTTCGGTTTCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp GCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATTATGGCCCCTGGGATGAACCCACCTGCAGTACATaGAAACAGGCTCTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: AEQEVRIGGARDYGPWDEPTCST*KQALSN
Trigger: GTTGGACAGAGCCTGTTTTCATGTACTGCAGGTGGG...TTCATCCCAGGGGCCATAATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp TATGGAGATTCAGGGCAGGATCCCTCAGGTACAAGAAACACCTTCCGAAGATTTCCAACTCCCAAGGCCTaGAGCGCACACTCATGCAAA +
Preference number: 4 (lower is better)
Translates to: YGDSGQDPSGTRNTFRRFPTPKA*SAHSCK
Trigger: TTTGCATGAGTGTGCGCTTCAGGCCTTGGGAGTTGG...AAATCTTCGGAAGGTGTTTCTTGTACCTGAGGGATCCTGCCCTGAATCTCCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp CTCAGACCTCAAAATACAGAGGTGCTCACTAATCCTCCCAGCCAGCTGATCCCCAGTAAGAATAGGTGGTaGAAGAGATTATGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LRPQNTEVLTNPPSQLIPSKNRW*KRLWPL
Trigger: CAGGGGCCATAATCTCTTGCACCACCTATTCTTACT...GGGGATCAGCTGGCTGGGAGGATTAGTGAGCACCTCTGTATTTTGAGGTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp GAACGGTACATCAAGCTGGGCATGCCAATGCTAGTGTCGTCCTCATCATCCAGGAGTAAGAATAGGTGGTaGAAGAGATTATGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: ERYIKLGMPMLVSSSSSRSKNRW*KRLWPL
Trigger: CAGGGGCCATAATCTCTTGCACCACCTATTCTTACT...CCTGGATGATGAGGACGACACTAGCATTGGCATGCCCAGCTTGATGTACCGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CCA 90 bp GGCAGGATCCCTCAGGTACAAGAAACACCTTCCGAAGATTTTGCTCTCCTTCCTGTCTCTCTCTCTGCTTaGACATCATGTAGCCACGGA +
Preference number: 4 (lower is better)
Translates to: GRIPQVQETPSEDFALLPVSLSA*TSCSHG
Trigger: TCCGTGGCTACATGATGTCCAAGCAGAGAGAGAGAC...AGGAAGGAGAGCAAAATCTTCGGAAGGTGTTTCTTGTACCTGAGGGATCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp ATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTATGGCTCGTTCTGGGTaGAGAGCTCTGCGGCGTAAT +
Preference number: 4 (lower is better)
Translates to: IPKSKQQHLLKGEPISLTMARSG*RALRRN
Trigger: ATTACGCCGCAGAGCTCTCCACCCAGAACGAGCCAT...AGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CCA 90 bp AAGCGCACACTCATGCAAACACACGAAATCCCCCTCCTTCCCCACACCTCCTGTTCCGTTAGAGGTGTTTaGCCCCTTGAAAGATTGAAT +
Preference number: 4 (lower is better)
Translates to: KRTLMQTHEIPLLPHTSCSVRGV*PLERLN
Trigger: ATTCAATCTTTCAAGGGGCCAAACACCTCTAACGGA...ACAGGAGGTGTGGGGAAGGAGGGGGATTTCGTGTGTTTGCATGAGTGTGCGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp CCAGATGGACCCAGGGGTTATCAGAAACCGAAGATTAACTACACAGCTCCAGAAAGGCTGATGGCCAGATaGACCCAGGGGTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: PDGPRGYQKPKINYTAPERLMAR*TQGLSE
Trigger: TTCTGATAACCCCTGGGTCCATCTGGCCATCAGCCT...TTCTGGAGCTGTGTAGTTAATCTTCGGTTTCTGATAACCCCTGGGTCCATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp AGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTATTTTGTTCGGCTTGAGCTCTGCTTaGGGAGGCAGAGGCTATAGA +
Preference number: 4 (lower is better)
Translates to: SKQQHLLKGEPISLTILFGLSSA*GGRGYR
Trigger: TCTATAGCCTCTGCCTCCCCAAGCAGAGCTCAAGCC...GAACAAAATAGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR CAA 72 bp GAGCCTTCCGTTAGAGGTGTTTGGCCCCTTGAAAGATaGAATGTGCCATTGTCTGTACAGGAGACTTCAGCG +
Preference number: 4 (lower is better)
Translates to: EPSVRGVWPLER*NVPLSVQETSA
Trigger: CGCTGAAGTCTCCTGTACAGACAATGGCACATTCAATCTTTCAAGGGGCCAAACACCTCTAACGGAAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CATGACAGTGACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGGCCGATCAATACACACAATaGTCATCAAGCCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: HDSDKHQVGQQKPRDVAADQYTQ*SSSQMQ
Trigger: TTGCATTTGGCTTGATGATCATTGTGTGTATTGATC...GGCCGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTCACTGTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586870.5
ENST00000589797.5
ENST00000593251.5
CDS-3UTR TCA 90 bp GGAGCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATTATGGCCCCTGGGATGGCCCCTTGAAAGATTaGATGTGCCATTGTCTGTAC +
Preference number: 4 (lower is better)
Translates to: GAEQEVRIGGARDYGPWDGPLKD*MCHCLY
Trigger: GTACAGACAATGGCACATTCAATCTTTCAAGGGGCC...ATCCCAGGGGCCATAATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp TCAGTTCACAGTGGAGACTATGGAGATTCAGGGCAGGATCCCTCAGGTACAAGAGGCCCCTTGAAAGATTaGATGTGCCATTGTCTGTAC +
Preference number: 4 (lower is better)
Translates to: SVHSGDYGDSGQDPSGTRGPLKD*MCHCLY
Trigger: GTACAGACAATGGCACATTCAATCTTTCAAGGGGCC...TCTTGTACCTGAGGGATCCTGCCCTGAATCTCCATAGTCTCCACTGTGAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp AAATTTCACAAGCAATACTTTGGACCACTGGGGTTCAGGCCCCAAGAAATGATGGGCAGTCAGCTCACTTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: KFHKQYFGPLGFRPQEMMGSQLT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAAGTGAGCTGACTGCC...CATCATTTCTTGGGGCCTGAACCCCAGTGGTCCAAAGTATTGCTTGTGAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp GCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATTATGGCCCCTGGGATGAAGGCCCCTGGGATGAATaGCATGGAGCCATTTGTAAA +
Preference number: 4 (lower is better)
Translates to: AEQEVRIGGARDYGPWDEGPWDE*HGAICK
Trigger: TTTACAAATGGCTCCATGTCATTCATCCCAGGGGCC...TTCATCCCAGGGGCCATAATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp TATGGAGATTCAGGGCAGGATCCCTCAGGTACAAGAAACACCTTCCGAAGATTTCCCACCTGCAGTACATaGAAACAGGCTCTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: YGDSGQDPSGTRNTFRRFPTCST*KQALSN
Trigger: GTTGGACAGAGCCTGTTTTCATGTACTGCAGGTGGG...AAATCTTCGGAAGGTGTTTCTTGTACCTGAGGGATCCTGCCCTGAATCTCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp ATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTACTTCAGCGTCTGAGTaGTCAGAGTCTGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: IPKSKQQHLLKGEPISLTTSASE*SESVMA
Trigger: GGCCATCACAGACTCTGAGCACTCAGACGCTGAAGT...AGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR GCA 90 bp ATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTGCTGAGTTCTTCCCTTaGCCCATCACCTTAAGTGGG +
Preference number: 4 (lower is better)
Translates to: IPKSKQQHLLKGEPISLTAEFFP*PITLSG
Trigger: CCCACTTAAGGTGATGGGGCAAGGGAAGAACTCAGC...AGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR GCA 90 bp AGATTGAATGTGCCATTGTCTGTACAGGAGACTTCAGCGTCTGAGTGCTCAGAGCTGGAAGGCAGACGTTaGAGAAAGCCAAGATCACAC +
Preference number: 4 (lower is better)
Translates to: RLNVPLSVQETSASECSELEGRR*RKPRSH
Trigger: GTGTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAG...CTCTGAGCACTCAGACGCTGAAGTCTCCTGTACAGACAATGGCACATTCAATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR GCA 90 bp GGTGTTTGGCCCCTTGAAAGATTGAATGTGCCATTGTCTGTACAGGAGACTTCACTGAGCAACCGAGGGTaGACAAAGCCCCAGCTTTTA +
Preference number: 4 (lower is better)
Translates to: GVWPLERLNVPLSVQETSLSNRG*TKPQLL
Trigger: TAAAAGCTGGGGCTTTGTGCACCCTCGGTTGCTCAG...TGAAGTCTCCTGTACAGACAATGGCACATTCAATCTTTCAAGGGGCCAAACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CTCATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGTCTTCGCTGTCACTGTaGTTGTCCATGGCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: LIPKSKQQHLLKGEPISLSSLSL*LSMARS
Trigger: AGAACGAGCCATGGACAACCACAGTGACAGCGAAGA...CAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CCA 90 bp TGGCCAGATGGACCCAGGGGTTATCAGAAACCGAAGATTAACTACACAGCTCCAAATGGAAGGGAAGTCTaGAAGGTCTCTGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: WPDGPRGYQKPKINYTAPNGREV*KVSGKG
Trigger: TCCTTTGCCAGAGACCTTCCAGACTTCCCTTCCATT...TGGAGCTGTGTAGTTAATCTTCGGTTTCTGATAACCCCTGGGTCCATCTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp CTGAGGCAGGAGAACCTCTTCAACCTGGAAGGCAGACGTTGCAGAAAGCCAAGACCACATTCTTACTATTaGCTCATCCTTAAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LRQENLFNLEGRRCRKPRPHSYY*LILKGG
Trigger: GCCTCCTTTAAGGATGAGCCAATAGTAAGAATGTGG...TCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTTGAAGAGGTTCTCCTGCCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
3UTR CAA 72 bp AGAGGTGTTTGGCCCCTTGAAAGATTGAATGTGCCATaGTCTGTACAGGAGACTTCAGCGTCTGAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: RGVWPLERLNVP*SVQETSASECS
Trigger: TGAGCACTCAGACGCTGAAGTCTCCTGTACAGACAATGGCACATTCAATCTTTCAAGGGGCCAAACACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp CACACTCTCACTTCAGTGACTGAGCTCAGAAATGGGCATCCAGCTGGTGGGAGGGATCAATACACACAATaGTCATCAAGCCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: HTLTSVTELRNGHPAGGRDQYTQ*SSSQMQ
Trigger: TTGCATTTGGCTTGATGATCATTGTGTGTATTGATC...CCTCCCACCAGCTGGATGCCCATTTCTGAGCTCAGTCACTGAAGTGAGAGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR GCA 90 bp CCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTATTGATTTCACTAGGGGCTaGAGAACAGATACCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PKSKQQHLLKGEPISLTIDFTRG*RTDTPQ
Trigger: CTGAGGGGTATCTGTTCTGCAGCCCCTAGTGAAATC...AATAGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp ATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTGTCTCTCTCTCTGCTTaGACATCATGTAGCCACGGA +
Preference number: 4 (lower is better)
Translates to: IPKSKQQHLLKGEPISLTVSLSA*TSCSHG
Trigger: TCCGTGGCTACATGATGTCCAAGCAGAGAGAGAGAC...AGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CCA 90 bp GGAGCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATTATGGCCCCTGGGATGAGGCCCCACCAAGTTaGGAAGCAGTTGAAAATAAA +
Preference number: 4 (lower is better)
Translates to: GAEQEVRIGGARDYGPWDEAPPS*EAVENK
Trigger: TTTATTTTCAACTGCTTCCCAACTTGGTGGGGCCTC...ATCCCAGGGGCCATAATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp TATGGAGATTCAGGGCAGGATCCCTCAGGTACAAGAAACACCTTCCGAAGATTTTCACAGTGGAGACTATaGAGATTCAGGGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: YGDSGQDPSGTRNTFRRFSQWRL*RFRAGS
Trigger: GGATCCTGCCCTGAATCTCCATAGTCTCCACTGTGA...AAATCTTCGGAAGGTGTTTCTTGTACCTGAGGGATCCTGCCCTGAATCTCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp AGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTATTTTGTTCGGCCCCTTGAAAGATTaGATGTGCCATTGTCTGTAC +
Preference number: 4 (lower is better)
Translates to: SKQQHLLKGEPISLTILFGPLKD*MCHCLY
Trigger: GTACAGACAATGGCACATTCAATCTTTCAAGGGGCC...GAACAAAATAGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR TCA 90 bp ATGCTAGTGTCGTCCTCATCATCCAGGCCAGCAGGATCCATATTAATGGAAGGGCTGTATCATCCCCCATaGATTATTGCTTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: MLVSSSSSRPAGSILMEGLYHPP*IIASPK
Trigger: CTTTGGAGAAGCAATAATTCATGGGGGATGATACAG...CCCTTCCATTAATATGGATCCTGCTGGCCTGGATGATGAGGACGACACTAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR GCA 90 bp CTCATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGTCCCCCATGAATTATTaGTTCTCCAAAGGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LIPKSKQQHLLKGEPISLSPMNY*FSKGGA
Trigger: TGCTCCTCCTTTGGAGAAGCAATAATTCATGGGGGA...CAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTATGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR GCA 90 bp CTAAGGAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGAGCCATTTGTAAAGTaGTACTGTATCATCCCCCAT +
Preference number: 4 (lower is better)
Translates to: LRRPLSISQATQHTNIIQEPFVK*YCIIPH
Trigger: ATGGGGGATGATACAGTAGCACTTTACAAATGGCTC...CTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTCCTTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp CCGAAGATTAACTACACAGCTCCAGAAGACTCAGACCTCAAAATACAGAGGTGCAGTCTGGAAGGTCTCTaGCAAAGGATTCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: PKINYTAPEDSDLKIQRCSLEGL*QRIPLD
Trigger: ATCCAGAGGAATCCTTTGCCAGAGACCTTCCAGACT...GCACCTCTGTATTTTGAGGTCTGAGTCTTCTGGAGCTGTGTAGTTAATCTTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp AGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTATTTTGTTCAGTCTGGAAGGTCTCTaGCAAAGGATTCCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: SKQQHLLKGEPISLTILFSLEGL*QRIPLD
Trigger: ATCCAGAGGAATCCTTTGCCAGAGACCTTCCAGACT...GAACAAAATAGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CCA 90 bp GGTGTTTGGCCCCTTGAAAGATTGAATGTGCCATTGTCTGTACAGGAGACTTCAAATGGAAGGGAAGTCTaGAAGGTCTCTGGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: GVWPLERLNVPLSVQETSNGREV*KVSGKG
Trigger: TCCTTTGCCAGAGACCTTCCAGACTTCCCTTCCATT...TGAAGTCTCCTGTACAGACAATGGCACATTCAATCTTTCAAGGGGCCAAACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CCAGATGGACCCAGGGGTTATCAGAAACCGAAGATTAACTACACAGCTCCAGAAGAGGCCCCACCAAGTTaGGAAGCAGTTGAAAATAAA +
Preference number: 4 (lower is better)
Translates to: PDGPRGYQKPKINYTAPEEAPPS*EAVENK
Trigger: TTTATTTTCAACTGCTTCCCAACTTGGTGGGGCCTC...TTCTGGAGCTGTGTAGTTAATCTTCGGTTTCTGATAACCCCTGGGTCCATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp AGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTATTTTGTTCAGGTGTTTGGCCCCTTaGAAGATTGAATGTGCCATT +
Preference number: 4 (lower is better)
Translates to: SKQQHLLKGEPISLTILFRCLAP*KIECAI
Trigger: AATGGCACATTCAATCTTTCAAGGGGCCAAACACCT...GAACAAAATAGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR TCA 90 bp AGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTATTTTGTTCAAACCTAAACCACAGTaGCTCCCAAAAGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SKQQHLLKGEPISLTILFKPKPQ*LPKGVS
Trigger: AGAGACTCCTTTTGGGAGTCACTGTGGTTTAGGTTT...GAACAAAATAGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CCA 90 bp CTCATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGTCCGTTAGAGGTGTTTaGCCCCTTGAAAGATTGAAT +
Preference number: 4 (lower is better)
Translates to: LIPKSKQQHLLKGEPISLSVRGV*PLERLN
Trigger: ATTCAATCTTTCAAGGGGCCAAACACCTCTAACGGA...CAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
3UTR CAA 72 bp CCACACCTCCTGTCTTTCCACATCAGAGCTCTGAACTaGAGAGGTGTCAAAAGTCTGTTTGAGAAGCCTAAA +
Preference number: 4 (lower is better)
Translates to: PHLLSFHIRALN*RGVKSLFEKPK
Trigger: TTTAGGCTTCTCAAACAGACTTTTGACACCTCTCAAGTTCAGAGCTCTGATGTGGAAAGACAGGAGGTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp CTAAGGAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGATCAATACACACAATaGTCATCAAGCCAAATGCAA +
Preference number: 4 (lower is better)
Translates to: LRRPLSISQATQHTNIIQDQYTQ*SSSQMQ
Trigger: TTGCATTTGGCTTGATGATCATTGTGTGTATTGATC...CTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTCCTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR TCA 90 bp AATAAAAGCTGTAAAGGAGCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATGGAGACTTCAGCGTCTaGGTGCTCAGAGTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: NKSCKGAEQEVRIGGARDGDFSV*VLRVCD
Trigger: ATCACAGACTCTGAGCACTCAGACGCTGAAGTCTCC...ATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGCTCCTTTACAGCTTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp ATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTCTGTATCATCCCCCATaGATTATTGCTTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: IPKSKQQHLLKGEPISLTLYHPP*IIASPK
Trigger: CTTTGGAGAAGCAATAATTCATGGGGGATGATACAG...AGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR TCA 90 bp AATAAAAGCTGTAAAGGAGCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATTTATGGCCCCTGGGATaGATGACATGGAGCCATTTG +
Preference number: 4 (lower is better)
Translates to: NKSCKGAEQEVRIGGARDLWPLG*MTWSHL
Trigger: CAAATGGCTCCATGTCATTCATCCCAGGGGCCATAA...ATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGCTCCTTTACAGCTTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CCA 90 bp ATCAGAAACCGAAGATTAACTACACAGCTCCAGAAGACTCAGACCTCAAAATACTCCGTTAGAGGTGTTTaGCCCCTTGAAAGATTGAAT +
Preference number: 4 (lower is better)
Translates to: IRNRRLTTQLQKTQTSKYSVRGV*PLERLN
Trigger: ATTCAATCTTTCAAGGGGCCAAACACCTCTAACGGA...GTATTTTGAGGTCTGAGTCTTCTGGAGCTGTGTAGTTAATCTTCGGTTTCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS GCA 90 bp TTGGCGCCTGCGTCTTGCGGCGAGCGGGCTGGCGTGCGGCGCCGTTaGGGGCGGGAGCGGCTGCAACGCCGGTGCCTGTCGGAACATGGA +
Preference number: 5 (lower is better)
Translates to: LAPASCGERAGVRRR*GRERLQRRCLSEHG
Trigger: TCCATGTTCCGACAGGCACCGGCGTTGCAGCCGCTCCCGCCCGCAACGGCGCCGCACGCCAGCCCGCTCGCCGCAAGACGCAGGCGCCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS TCA 90 bp GGCCCGCTGCGCCGCCTCAACCTGCTGGTCCCGCTCCCAGGAGCCTaGCACATCTCGGCGGCCCCTGAAAGTCGACCCCGAAGCCGGGCC +
Preference number: 5 (lower is better)
Translates to: GPLRRLNLLVPLPGA*HISAAPESRPRSRA
Trigger: GGCCCGGCTTCGGGGTCGACTTTCAGGGGCCGCCGAGATGTGTCAGGCTCCTGGGAGCGGGACCAGCAGGTTGAGGCGGCGCAGCGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309428.10
ENST00000585726.5
ENST00000586796.1
ENST00000586870.5
ENST00000589797.5
ENST00000590541.1
ENST00000593251.5
CDS GCA 90 bp CGGAGGAAGTTCGTGGGTGGAGCTGGTTGTTTGGCGCCTGCGTCTTaGGGCGAGCGGGCTGGCGTGCGGCGCCGTTGCGGGCGGGAGCGG +
Preference number: 5 (lower is better)
Translates to: RRKFVGGAGCLAPAS*GERAGVRRRCGRER
Trigger: CCGCTCCCGCCCGCAACGGCGCCGCACGCCAGCCCGCTCGCCGCAAGACGCAGGCGCCAAACAACCAGCTCCACCCACGAACTTCCTCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS GCA 90 bp ATTGGAGCGGAGGAAGTTCGTGGGTGGAGCTGGTTGTTTGGCGCCTaGGTCTTGCGGCGAGCGGGCTGGCGTGCGGCGCCGTTGCGGGCG +
Preference number: 5 (lower is better)
Translates to: IGAEEVRGWSWLFGA*VLRRAGWRAAPLRA
Trigger: CGCCCGCAACGGCGCCGCACGCCAGCCCGCTCGCCGCAAGACGCAGGCGCCAAACAACCAGCTCCACCCACGAACTTCCTCCGCTCCAAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CCA 90 bp CCAGAAAGCCGCGTTCAGCCCCAGGCACCACAGAGCGCTCCTAGCTaGCCGCTCCCACACCAGGGCTGCCTGCACCCGACTCAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: PESRVQPQAPQSAPS*PLPHQGCLHPTQQR
Trigger: CCTCTGCTGAGTCGGGTGCAGGCAGCCCTGGTGTGGGAGCGGCCAGCTAGGAGCGCTCTGTGGTGCCTGGGGCTGAACGCGGCTTTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309428.10
ENST00000586796.1
ENST00000586870.5
ENST00000589797.5
ENST00000590541.1
ENST00000593251.5
CDS CCA 90 bp ACAGAAAGCCGCGTTCAGCCCCAGGCACCACAGAGCGCTCCTAGCTaGCCGCTCCCACACCAGGGCTGCCTGCACCCGACTCAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: TESRVQPQAPQSAPS*PLPHQGCLHPTQQR
Trigger: CCTCTGCTGAGTCGGGTGCAGGCAGCCCTGGTGTGGGAGCGGCCAGCTAGGAGCGCTCTGTGGTGCCTGGGGCTGAACGCGGCTTTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585726.5
CDS CCA 90 bp GATTCTCATTGGAGCGGAGGAAGTTCGTGGGTGGAGCTGGTTGTTTaGCGCCTGCGTCTTGCGGCGAGCGGGCTGGCGTGCGGCGCCGTT +
Preference number: 5 (lower is better)
Translates to: DSHWSGGSSWVELVV*RLRLAASGLACGAV
Trigger: AACGGCGCCGCACGCCAGCCCGCTCGCCGCAAGACGCAGGCGCCAAACAACCAGCTCCACCCACGAACTTCCTCCGCTCCAATGAGAATC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CCA 90 bp CAGAACTCGATTCTCATTGGAGCGGAGGAAGTTCGTGGGTGGAGCTaGTTGTTTGGCGCCTGCGTCTTGCGGCGAGCGGGCTGGCGTGCG +
Preference number: 5 (lower is better)
Translates to: QNSILIGAEEVRGWS*LFGACVLRRAGWRA
Trigger: CGCACGCCAGCCCGCTCGCCGCAAGACGCAGGCGCCAAACAACCAGCTCCACCCACGAACTTCCTCCGCTCCAATGAGAATCGAGTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS-3UTR CAA 90 bp GCCGCTGCAGAGCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTGGAGGAAGCCTCTCGTaGCTCTCTGGGCAGGTGCTC +
Preference number: 5 (lower is better)
Translates to: AAAELASAAHMLDPTVGGGGSLS*LSGQVL
Trigger: GAGCACCTGCCCAGAGAGCAACGAGAGGCTTCCTCC...ACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGCAGCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS GCA 90 bp GATCCGGAGGCGCCGAGCCGCATCCGGAGCCGCGCACGCGCAATCTaGATGAACGAAGGCCAGTGCTTAAAGACGTGCCATTCATTGCCA +
Preference number: 5 (lower is better)
Translates to: DPEAPSRIRSRARAI*MNEGQCLKTCHSLP
Trigger: TGGCAATGAATGGCACGTCTTTAAGCACTGGCCTTCGTTCATGCAGATTGCGCGTGCGCGGCTCCGGATGCGGCTCGGCGCCTCCGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CCA 90 bp CATTGCCAGAACTCGATTCTCATTGGAGCGGAGGAAGTTCGTGGGTaGAGCTGGTTGTTTGGCGCCTGCGTCTTGCGGCGAGCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: HCQNSILIGAEEVRG*SWLFGACVLRRAGW
Trigger: CCAGCCCGCTCGCCGCAAGACGCAGGCGCCAAACAACCAGCTCCACCCACGAACTTCCTCCGCTCCAATGAGAATCGAGTTCTGGCAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS-3UTR CAA 90 bp CATCCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATGGAGGAAGCCTCTCGTaGCTCTCTGGGCAGGTGCTC +
Preference number: 5 (lower is better)
Translates to: HPAGGRGVSVLSKEASEHGGSLS*LSGQVL
Trigger: GAGCACCTGCCCAGAGAGCAACGAGAGGCTTCCTCC...ATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CAA 90 bp CAGCAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAAAAAGGTCAGTATCCCGGAGGAAGCCTCTCGTaGCTCTCTGGGCAGGTGCTC +
Preference number: 5 (lower is better)
Translates to: QQKPRDVAAQDSQKGQYPGGSLS*LSGQVL
Trigger: GAGCACCTGCCCAGAGAGCAACGAGAGGCTTCCTCC...GGGATACTGACCTTTTTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CAA 90 bp CCTACAGGAAGAGCACCAAGCAGGAGCTCCGGCAGCGCAGCCTCGTCCCGGCTGCTCAGCAAGCAGAACTaGCCTGGGTTTTGCTTTTTG +
Preference number: 5 (lower is better)
Translates to: PTGRAPSRSSGSAASSRLLSKQN*PGFCFL
Trigger: CAAAAAGCAAAACCCAGGCAAGTTCTGCTTGCTGAG...CAGCCGGGACGAGGCTGCGCTGCCGGAGCTCCTGCTTGGTGCTCTTCCTGTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CAA 90 bp CCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATCAGTCGCTGTCACTGTGGTaGTCCATGGCTCGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: PAGGRGVSVLSKEASEHQSLSLW*SMARSG
Trigger: CCCAGAACGAGCCATGGACAACCACAGTGACAGCGA...CTGATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CAA 90 bp GGAGAGAAGCCTCCCTTGGGGGAGCACACTCTCACTTCAGTGACTGAGCTCAGAGGAGGAAGCCTCTCGTaGCTCTCTGGGCAGGTGCTC +
Preference number: 5 (lower is better)
Translates to: GEKPPLGEHTLTSVTELRGGSLS*LSGQVL
Trigger: GAGCACCTGCCCAGAGAGCAACGAGAGGCTTCCTCC...TCTGAGCTCAGTCACTGAAGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS CCA 90 bp CATTCATTGCCAGAACTCGATTCTCATTGGAGCGGAGGAAGTTCGTaGGTGGAGCTGGTTGTTTGGCGCCTGCGTCTTGCGGCGAGCGGG +
Preference number: 5 (lower is better)
Translates to: HSLPELDSHWSGGSS*VELVVWRLRLAASG
Trigger: CCCGCTCGCCGCAAGACGCAGGCGCCAAACAACCAGCTCCACCCACGAACTTCCTCCGCTCCAATGAGAATCGAGTTCTGGCAATGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS-3UTR CAA 90 bp CCCACTACTAAGGAGGCTGAGGCAGGAGAACCTCTTCAACCTGGAAGGCAGACGAGCTGCTGCCTGACTTaGGGGGCTCTAGAGAGGCGA +
Preference number: 5 (lower is better)
Translates to: PTTKEAEAGEPLQPGRQTSCCLT*GALERR
Trigger: TCGCCTCTCTAGAGCCCCCAAAGTCAGGCAGCAGCT...CGTCTGCCTTCCAGGTTGAAGAGGTTCTCCTGCCTCAGCCTCCTTAGTAGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CAA 90 bp CAGCATCAGTGTCCAGGTCTGAACTGGGGGACCGGAGGAAGCCTCTCGTTGCTCAGGTTGCTGGTGAGGTaGGATCCTACAGGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: QHQCPGLNWGTGGSLSLLRLLVR*DPTGRA
Trigger: TGCTCTTCCTGTAGGATCCAACCTCACCAGCAACCT...GAGCAACGAGAGGCTTCCTCCGGTCCCCCAGTTCAGACCTGGACACTGATGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CAA 90 bp CTGAGGCAGGAGAACCTCTTCAACCTGGAAGGCAGACGTTGCAGAAAGCCAAGAGGAGAGAAGCCTCCCTaGGGGGAGCACACTCTCACT +
Preference number: 5 (lower is better)
Translates to: LRQENLFNLEGRRCRKPRGEKPP*GEHTLT
Trigger: AGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTCTCC...TCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTTGAAGAGGTTCTCCTGCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CAA 90 bp GGAGACCAGGCTGGCAAGGTTGCTGGTGAGGTTGGATCCTACAGGAAGAGCACCAGGCGGGCTGATCATTaGCAGTCAGGAGTTCTAGAC +
Preference number: 5 (lower is better)
Translates to: GDQAGKVAGEVGSYRKSTRRADH*QSGVLD
Trigger: GTCTAGAACTCCTGACTGCAAATGATCAGCCCGCCT...GGTGCTCTTCCTGTAGGATCCAACCTCACCAGCAACCTTGCCAGCCTGGTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CAA 90 bp GCCGCTGCAGAGCTGGCTTCAGCCGCACATATGCTCGATCCCACAGTCGGTGGTGAGTATGGTATTGCTTaGCTCACTGCTGAGGCTGAT +
Preference number: 5 (lower is better)
Translates to: AAAELASAAHMLDPTVGGEYGIA*LTAEAD
Trigger: ATCAGCCTCAGCAGTGAGCAAAGCAATACCATACTC...ACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCTGCAGCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS GCA 90 bp CGCATCCGGAGCCGCGCACGCGCAATCTGCATGAACGAAGGCCAGTaGTTAAAGACGTGCCATTCATTGCCAGAACTCGATTCTCATTGG +
Preference number: 5 (lower is better)
Translates to: RIRSRARAICMNEGQ*LKTCHSLPELDSHW
Trigger: CCAATGAGAATCGAGTTCTGGCAATGAATGGCACGTCTTTAAGCACTGGCCTTCGTTCATGCAGATTGCGCGTGCGCGGCTCCGGATGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS-3UTR CAA 90 bp CAGGCCCCAAGAAATGATGGGCTAGATGAGAGGGAGCAGGCCTGTTCTGCAAAATCGCTGTCACTGTGGTaGTCCATGGCTCGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: QAPRNDGLDEREQACSAKSLSLW*SMARSG
Trigger: CCCAGAACGAGCCATGGACAACCACAGTGACAGCGA...TTTTGCAGAACAGGCCTGCTCCCTCTCATCTAGCCCATCATTTCTTGGGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CAA 90 bp GGAGAGAAGCCTCCCTTGGGGGAGCACACTCTCACTTCAGTGACTGAGCTCAGAAGGTTGCTGGTGAGGTaGGATCCTACAGGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: GEKPPLGEHTLTSVTELRRLLVR*DPTGRA
Trigger: TGCTCTTCCTGTAGGATCCAACCTCACCAGCAACCT...TCTGAGCTCAGTCACTGAAGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CAA 90 bp TTCAACCTGGAAGGCAGACGTTGCAGAAAGCCAAGATCACACCACTGCACTCCAGGAGAGAAGCCTCCCTaGGGGGAGCACACTCTCACT +
Preference number: 5 (lower is better)
Translates to: FNLEGRRCRKPRSHHCTPGEKPP*GEHTLT
Trigger: AGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTCTCC...TGGAGTGCAGTGGTGTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CAA 90 bp CAGCACACCCCTCCCCTCCTCAGTTCACAGTGGAGACTATGGAGATTCAGGGCAAGGCGGGCTGATCATTaGCAGTCAGGAGTTCTAGAC +
Preference number: 5 (lower is better)
Translates to: QHTPPLLSSQWRLWRFRARRADH*QSGVLD
Trigger: GTCTAGAACTCCTGACTGCAAATGATCAGCCCGCCT...TGCCCTGAATCTCCATAGTCTCCACTGTGAACTGAGGAGGGGAGGGGTGTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CAA 90 bp CTGAAGCGCACACTCATGCAAACACACGAAATCCCCCTCCTTCCCCACACCTCCCACCTTCCGAAGATTTaGCTCTCCTTCCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: LKRTLMQTHEIPLLPHTSHLPKI*LSFLPS
Trigger: GGAGGGAAGGAAGGAGAGCAAAATCTTCGGAAGGTG...GGAGGTGTGGGGAAGGAGGGGGATTTCGTGTGTTTGCATGAGTGTGCGCTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CAA 90 bp CAGAAGCCCAGGGACGTAGCGGCCCAAGACAGCCAAAAAGGTCAGTATCCCACACTAATGCGTCGGGTCTaGGCACTTTTATTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: QKPRDVAAQDSQKGQYPTLMRRV*ALLFQA
Trigger: GGCCTGAAATAAAAGTGCCAAGACCCGACGCATTAG...TGTGGGATACTGACCTTTTTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000593251.5
CDS-3UTR CAA 90 bp CACACTCTCACTTCAGTGACTGAGCTCAGAAATGGGCATCCAGCTGGTGGGAGGAGGTTGCTGGTGAGGTaGGATCCTACAGGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: HTLTSVTELRNGHPAGGRRLLVR*DPTGRA
Trigger: TGCTCTTCCTGTAGGATCCAACCTCACCAGCAACCT...CCTCCCACCAGCTGGATGCCCATTTCTGAGCTCAGTCACTGAAGTGAGAGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CAA 90 bp TCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGACAGTGACAAGAGGTTGCTGGTGAGGTaGGATCCTACAGGAAGAGCA +
Preference number: 5 (lower is better)
Translates to: SIPQSVVHSKGPHHDSDKRLLVR*DPTGRA
Trigger: TGCTCTTCCTGTAGGATCCAACCTCACCAGCAACCT...CTTGTCACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CAA 90 bp TGGCGGAGAACGGTACATCAAGCTGGGCATGCCAATGCTAGTGTCGTCCTCATCCACCTTCCGAAGATTTaGCTCTCCTTCCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: WRRTVHQAGHANASVVLIHLPKI*LSFLPS
Trigger: GGAGGGAAGGAAGGAGAGCAAAATCTTCGGAAGGTG...GATGAGGACGACACTAGCATTGGCATGCCCAGCTTGATGTACCGTTCTCCGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS GCA 90 bp CGCGCACGCGCAATCTGCATGAACGAAGGCCAGTGCTTAAAGACGTaGCATTCATTGCCAGAACTCGATTCTCATTGGAGCGGAGGAAGT +
Preference number: 5 (lower is better)
Translates to: RARAICMNEGQCLKT*HSLPELDSHWSGGS
Trigger: ACTTCCTCCGCTCCAATGAGAATCGAGTTCTGGCAATGAATGGCACGTCTTTAAGCACTGGCCTTCGTTCATGCAGATTGCGCGTGCGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CCA 90 bp CAGTGCTTAAAGACGTGCCATTCATTGCCAGAACTCGATTCTCATTaGAGCGGAGGAAGTTCGTGGGTGGAGCTGGTTGTTTGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: QCLKTCHSLPELDSH*SGGSSWVELVVWRL
Trigger: CAGGCGCCAAACAACCAGCTCCACCCACGAACTTCCTCCGCTCCAATGAGAATCGAGTTCTGGCAATGAATGGCACGTCTTTAAGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS-3UTR CAA 90 bp GCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGGGAGGGGCTAATGCGTCGGGTCTaGGCACTTTTATTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: ASEHQPGHPAYKYNSGEGLMRRV*ALLFQA
Trigger: GGCCTGAAATAAAAGTGCCAAGACCCGACGCATTAG...CCCCTCCCCTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000585894.5
CDS-3UTR CAA 90 bp ATGCTAGTGTCGTCCTCATCATCCAGGCCAGCAGGATCCATATTAATGGAAGGGTCGCTGTCACTGTGGTaGTCCATGGCTCGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: MLVSSSSSRPAGSILMEGSLSLW*SMARSG
Trigger: CCCAGAACGAGCCATGGACAACCACAGTGACAGCGA...CCCTTCCATTAATATGGATCCTGCTGGCCTGGATGATGAGGACGACACTAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CAA 90 bp CTAGTGTCGTCCTCATCATCCAGGCCAGCAGGATCCATATTAATGGAAGGGAAGTCGCTGTCACTGTGGTaGTCCATGGCTCGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: LVSSSSSRPAGSILMEGKSLSLW*SMARSG
Trigger: CCCAGAACGAGCCATGGACAACCACAGTGACAGCGA...CTTCCCTTCCATTAATATGGATCCTGCTGGCCTGGATGATGAGGACGACACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CAA 90 bp CATCCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATTGGCCCCTTGAAAGATaGAATGTGCCATTGTCTGTA +
Preference number: 5 (lower is better)
Translates to: HPAGGRGVSVLSKEASEHWPLER*NVPLSV
Trigger: TACAGACAATGGCACATTCAATCTTTCAAGGGGCCA...ATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CAA 90 bp GCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATTATGGCCCCTGGGATGAAAGCTGCTGCCTGACTTaGGGGGCTCTAGAGAGGCGA +
Preference number: 5 (lower is better)
Translates to: AEQEVRIGGARDYGPWDESCCLT*GALERR
Trigger: TCGCCTCTCTAGAGCCCCCAAAGTCAGGCAGCAGCT...TTCATCCCAGGGGCCATAATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CAA 90 bp GGCAGGAGAACCTCTTCAACCTGGAAGGCAGACGTTGCAGAAAGCCAAGATCACCTAATGCGTCGGGTCTaGGCACTTTTATTTCAGGCC +
Preference number: 5 (lower is better)
Translates to: GRRTSSTWKADVAESQDHLMRRV*ALLFQA
Trigger: GGCCTGAAATAAAAGTGCCAAGACCCGACGCATTAG...GTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTTGAAGAGGTTCTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309428.10
CDS-3UTR CAA 90 bp CATCCAGCTGGTGGGAGGGGAGTGAGTGTCCTCTCTAAGGAGGCCTCTGAGCATAGATTGAATGTGCCATaGTCTGTACAGGAGACTTCA +
Preference number: 5 (lower is better)
Translates to: HPAGGRGVSVLSKEASEHRLNVP*SVQETS
Trigger: TGAAGTCTCCTGTACAGACAATGGCACATTCAATCT...ATGCTCAGAGGCCTCCTTAGAGAGGACACTCACTCCCCTCCCACCAGCTGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CAA 90 bp TGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGACAGTGACTGGCCCCTTGAAAGATaGAATGTGCCATTGTCTGTA +
Preference number: 5 (lower is better)
Translates to: CSIPQSVVHSKGPHHDSDWPLER*NVPLSV
Trigger: TACAGACAATGGCACATTCAATCTTTCAAGGGGCCA...GTCACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CAA 90 bp CAGCACACCCCTCCCCTCCTCAGTTCACAGTGGAGACTATGGAGATTCAGGGCATGGCCCCTTGAAAGATaGAATGTGCCATTGTCTGTA +
Preference number: 5 (lower is better)
Translates to: QHTPPLLSSQWRLWRFRAWPLER*NVPLSV
Trigger: TACAGACAATGGCACATTCAATCTTTCAAGGGGCCA...TGCCCTGAATCTCCATAGTCTCCACTGTGAACTGAGGAGGGGAGGGGTGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CAA 90 bp ATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTGGAGAGAAGCCTCCCTaGGGGGAGCACACTCTCACT +
Preference number: 5 (lower is better)
Translates to: IPKSKQQHLLKGEPISLTGEKPP*GEHTLT
Trigger: AGTGAGAGTGTGCTCCCCCAAGGGAGGCTTCTCTCC...AGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CAA 90 bp ATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTAGCTGCTGCCTGACTTaGGGGGCTCTAGAGAGGCGA +
Preference number: 5 (lower is better)
Translates to: IPKSKQQHLLKGEPISLTSCCLT*GALERR
Trigger: TCGCCTCTCTAGAGCCCCCAAAGTCAGGCAGCAGCT...AGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CAA 90 bp GGCAGGAGAACCTCTTCAACCTGGAAGGCAGACGTTGCAGAAAGCCAAGATCACTTCACAAGCAATACTTaGGACCACTGGGGTTCAGGC +
Preference number: 5 (lower is better)
Translates to: GRRTSSTWKADVAESQDHFTSNT*DHWGSG
Trigger: GCCTGAACCCCAGTGGTCCAAAGTATTGCTTGTGAA...GTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTTGAAGAGGTTCTCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CAA 90 bp GGAGCTGAACAGGAAGTAAGAATAGGTGGTGCAAGAGATTATGGCCCCTGGGATAAGCCCCAGCTCTCATaGTCTAATGCGTCGGGTCTT +
Preference number: 5 (lower is better)
Translates to: GAEQEVRIGGARDYGPWDKPQLS*SNASGL
Trigger: AAGACCCGACGCATTAGACAATGAGAGCTGGGGCTT...ATCCCAGGGGCCATAATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000309428.10
CDS-3UTR CAA 90 bp CTAAGGAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGAAGCCCCAGCTCTCATaGTCTAATGCGTCGGGTCTT +
Preference number: 5 (lower is better)
Translates to: LRRPLSISQATQHTNIIQKPQLS*SNASGL
Trigger: AAGACCCGACGCATTAGACAATGAGAGCTGGGGCTT...CTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTCCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000585894.5
CDS-3UTR CAA 90 bp TGGCCAGATGGACCCAGGGGTTATCAGAAACCGAAGATTAACTACACAGCTCCACCTGGAAGGCAGACGTaGCAGAAAGCCAAGATCACA +
Preference number: 5 (lower is better)
Translates to: WPDGPRGYQKPKINYTAPPGRQT*QKAKIT
Trigger: TGTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAGG...TGGAGCTGTGTAGTTAATCTTCGGTTTCTGATAACCCCTGGGTCCATCTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CAA 90 bp AGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTATTTTGTTCACAGAAGCGTTTGGCTaGAGCTCTGCTTGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: SKQQHLLKGEPISLTILFTEAFG*SSAWGG
Trigger: GCCTCCCCAAGCAGAGCTCAAGCCAAACGCTTCTGT...GAACAAAATAGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CAA 90 bp GGTGTTTGGCCCCTTGAAAGATTGAATGTGCCATTGTCTGTACAGGAGACTTCAACAGAAGCGTTTGGCTaGAGCTCTGCTTGGGGAGGC +
Preference number: 5 (lower is better)
Translates to: GVWPLERLNVPLSVQETSTEAFG*SSAWGG
Trigger: GCCTCCCCAAGCAGAGCTCAAGCCAAACGCTTCTGT...TGAAGTCTCCTGTACAGACAATGGCACATTCAATCTTTCAAGGGGCCAAACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CAA 90 bp CTCATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGAGCCCTCGCTCACTCTaGAGCGGCTCAAGATGTTAC +
Preference number: 5 (lower is better)
Translates to: LIPKSKQQHLLKGEPISLSPRSL*SGSRCY
Trigger: GTAACATCTTGAGCCGCTCAAGAGTGAGCGAGGGCT...CAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CAA 90 bp CATCATGACAGTGACAAGCATCAAGTAGGACAGCAGAAGCCCAGGGACGTAGCGCAAGCAGAACTCTCATaGTCTAATGCGTCGGGTCTT +
Preference number: 5 (lower is better)
Translates to: HHDSDKHQVGQQKPRDVAQAELS*SNASGL
Trigger: AAGACCCGACGCATTAGACAATGAGAGTTCTGCTTG...CGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTCACTGTCATGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593251.5
CDS-3UTR CAA 90 bp TTCAACCTGGAAGGCAGACGTTGCAGAAAGCCAAGATCACACCACTGCACTCCACTCAGCAAGCAGAACTaGCCTGGGTTTTGCTTTTTG +
Preference number: 5 (lower is better)
Translates to: FNLEGRRCRKPRSHHCTPLSKQN*PGFCFL
Trigger: CAAAAAGCAAAACCCAGGCAAGTTCTGCTTGCTGAG...TGGAGTGCAGTGGTGTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CAA 90 bp TCCAGGCCAGCAGGATCCATATTAATGGAAGGGAAGTCTGGAAGGTCTCTGGCACTCAGCAAGCAGAACTaGCCTGGGTTTTGCTTTTTG +
Preference number: 5 (lower is better)
Translates to: SRPAGSILMEGKSGRSLALSKQN*PGFCFL
Trigger: CAAAAAGCAAAACCCAGGCAAGTTCTGCTTGCTGAG...TGCCAGAGACCTTCCAGACTTCCCTTCCATTAATATGGATCCTGCTGGCCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CAA 90 bp AAGCGCACACTCATGCAAACACACGAAATCCCCCTCCTTCCCCACACCTCCTGTAGATTGAATGTGCCATaGTCTGTACAGGAGACTTCA +
Preference number: 5 (lower is better)
Translates to: KRTLMQTHEIPLLPHTSCRLNVP*SVQETS
Trigger: TGAAGTCTCCTGTACAGACAATGGCACATTCAATCT...ACAGGAGGTGTGGGGAAGGAGGGGGATTTCGTGTGTTTGCATGAGTGTGCGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CAA 90 bp CACATATGCTCGATCCCACAGTCGGTGGTACACAGCAAGGGGCCACATCATGACATATCCCTGACTATTTaGTTCCCCCAAAGTACCATC +
Preference number: 5 (lower is better)
Translates to: HICSIPQSVVHSKGPHHDISLTI*FPQSTI
Trigger: GATGGTACTTTGGGGGAACAAAATAGTCAGGGATAT...GTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS-3UTR CAA 90 bp CCAGATGGACCCAGGGGTTATCAGAAACCGAAGATTAACTACACAGCTCCAGAACCTGGAAGGCAGACGTaGCAGAAAGCCAAGATCACA +
Preference number: 5 (lower is better)
Translates to: PDGPRGYQKPKINYTAPEPGRQT*QKAKIT
Trigger: TGTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAGG...TTCTGGAGCTGTGTAGTTAATCTTCGGTTTCTGATAACCCCTGGGTCCATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CAA 90 bp GAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGGGGAGATATCCCTGACTATTTaGTTCCCCCAAAGTACCATC +
Preference number: 5 (lower is better)
Translates to: EASEHQPGHPAYKYNSGEISLTI*FPQSTI
Trigger: GATGGTACTTTGGGGGAACAAAATAGTCAGGGATAT...CTCCCCTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CAA 90 bp TGGCCAGATGGACCCAGGGGTTATCAGAAACCGAAGATTAACTACACAGCTCCAGAGTATGGTATTGCTTaGCTCACTGCTGAGGCTGAT +
Preference number: 5 (lower is better)
Translates to: WPDGPRGYQKPKINYTAPEYGIA*LTAEAD
Trigger: ATCAGCCTCAGCAGTGAGCAAAGCAATACCATACTC...TGGAGCTGTGTAGTTAATCTTCGGTTTCTGATAACCCCTGGGTCCATCTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CAA 90 bp TTCAACCTGGAAGGCAGACGTTGCAGAAAGCCAAGATCACACCACTGCACTCCAGTGTCAAAAGTCTGTTaGAGAAGCCTAAAGTGGGGA +
Preference number: 5 (lower is better)
Translates to: FNLEGRRCRKPRSHHCTPVSKVC*RSLKWG
Trigger: TCCCCACTTTAGGCTTCTCAAACAGACTTTTGACAC...TGGAGTGCAGTGGTGTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CAA 90 bp ATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTCTCAGCAAGCAGAACTaGCCTGGGTTTTGCTTTTTG +
Preference number: 5 (lower is better)
Translates to: IPKSKQQHLLKGEPISLTLSKQN*PGFCFL
Trigger: CAAAAAGCAAAACCCAGGCAAGTTCTGCTTGCTGAG...AGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CAA 90 bp CTAAGGAGGCCTCTGAGCATCAGCCAGGCCACCCAGCATACAAATATAATTCAGAGATTGAATGTGCCATaGTCTGTACAGGAGACTTCA +
Preference number: 5 (lower is better)
Translates to: LRRPLSISQATQHTNIIQRLNVP*SVQETS
Trigger: TGAAGTCTCCTGTACAGACAATGGCACATTCAATCT...CTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTCCTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000586870.5
ENST00000589797.5
CDS-3UTR CAA 90 bp CTCATACCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGTGGCCCCTTGAAAGATaGAATGTGCCATTGTCTGTA +
Preference number: 5 (lower is better)
Translates to: LIPKSKQQHLLKGEPISLWPLER*NVPLSV
Trigger: TACAGACAATGGCACATTCAATCTTTCAAGGGGCCA...CAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGGTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CAA 90 bp CCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTATTAGATTGAATGTGCCATaGTCTGTACAGGAGACTTCA +
Preference number: 5 (lower is better)
Translates to: PKSKQQHLLKGEPISLTIRLNVP*SVQETS
Trigger: TGAAGTCTCCTGTACAGACAATGGCACATTCAATCT...AATAGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CAA 90 bp CCTAAAAGCAAACAGCAGCACCTCCTCAAAGGGGAACCAATATCCCTGACTATTATATCCCTGACTATTTaGTTCCCCCAAAGTACCATC +
Preference number: 5 (lower is better)
Translates to: PKSKQQHLLKGEPISLTIISLTI*FPQSTI
Trigger: GATGGTACTTTGGGGGAACAAAATAGTCAGGGATAT...AATAGTCAGGGATATTGGTTCCCCTTTGAGGAGGTGCTGCTGTTTGCTTTTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000589797.5
CDS-3UTR CAA 90 bp ATCAGAAACCGAAGATTAACTACACAGCTCCAGAAGACTCAGACCTCAAAATACTTCACAAGCAATACTTaGGACCACTGGGGTTCAGGC +
Preference number: 5 (lower is better)
Translates to: IRNRRLTTQLQKTQTSKYFTSNT*DHWGSG
Trigger: GCCTGAACCCCAGTGGTCCAAAGTATTGCTTGTGAA...GTATTTTGAGGTCTGAGTCTTCTGGAGCTGTGTAGTTAATCTTCGGTTTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309428.10
ENST00000589797.5
CDS-3UTR CAA 90 bp ACTAAAACCTCTGGAAACAATCTAGAACTTGCACTTGAGCAGACAAGAGAAAGGGTGTCAAAAGTCTGTTaGAGAAGCCTAAAGTGGGGA +
Preference number: 5 (lower is better)
Translates to: TKTSGNNLELALEQTRERVSKVC*RSLKWG
Trigger: TCCCCACTTTAGGCTTCTCAAACAGACTTTTGACAC...CCTTTCTCTTGTCTGCTCAAGTGCAAGTTCTAGATTGTTTCCAGAGGTTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589797.5
CDS TCA 90 bp CAGAACATGGGGTTAACAACATGTAACCAGAATATTACAAGAGAATaGATCAGAGCAACAAAAAGGGATTTAATTAGTGTTCCATACCTC +
Preference number: 5 (lower is better)
Translates to: QNMGLTTCNQNITRE*IRATKRDLISVPYL
Trigger: GAGGTATGGAACACTAATTAAATCCCTTTTTGTTGCTCTGATTCATTCTCTTGTAATATTCTGGTTACATGTTGTTAACCCCATGTTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586796.1
CDS GCA 72 bp GCGTCTTGCGGCGAGCGGGCTGGCGTGCGGCGCCGTTaGGGGCGGGAGCGGCTGCAACGCCGGTGCCTGTCG +
Preference number: 6 (lower is better)
Translates to: ASCGERAGVRRR*GRERLQRRCLS
Trigger: CGACAGGCACCGGCGTTGCAGCCGCTCCCGCCCGCAACGGCGCCGCACGCCAGCCCGCTCGCCGCAAGACGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS GCA 72 bp GTTTGGCGCCTGCGTCTTGCGGCGAGCGGGCTGGCGTaGGGCGCCGTTGCGGGCGGGAGCGGCTGCAACGCC +
Preference number: 6 (lower is better)
Translates to: VWRLRLAASGLA*GAVAGGSGCNA
Trigger: GGCGTTGCAGCCGCTCCCGCCCGCAACGGCGCCGCACGCCAGCCCGCTCGCCGCAAGACGCAGGCGCCAAAC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CAA 72 bp TGCGTCTTGCGGCGAGCGGGCTGGCGTGCGGCGCCGTaGCGGGCGGGAGCGGCTGCAACGCCGGTGCCTGTC +
Preference number: 6 (lower is better)
Translates to: CVLRRAGWRAAP*RAGAAATPVPV
Trigger: GACAGGCACCGGCGTTGCAGCCGCTCCCGCCCGCAACGGCGCCGCACGCCAGCCCGCTCGCCGCAAGACGCA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS GCA 72 bp GGGCTGGCGTGCGGCGCCGTTGCGGGCGGGAGCGGCTaGAACGCCGGTGCCTGTCGGAACATGGAGGAGGAG +
Preference number: 6 (lower is better)
Translates to: GLACGAVAGGSG*NAGACRNMEEE
Trigger: CTCCTCCTCCATGTTCCGACAGGCACCGGCGTTGCAGCCGCTCCCGCCCGCAACGGCGCCGCACGCCAGCCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CAA 90 bp TTTGGCGCCTGCGTCTTGCGGCGAGCGGGCTGGCGTGCGGCGCCGTaGCGGGCGGGAGCGGCTGCAACGCCGGTGCCTGTCGGAACATGG +
Preference number: 6 (lower is better)
Translates to: FGACVLRRAGWRAAP*RAGAAATPVPVGTW
Trigger: CCATGTTCCGACAGGCACCGGCGTTGCAGCCGCTCCCGCCCGCAACGGCGCCGCACGCCAGCCCGCTCGCCGCAAGACGCAGGCGCCAAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CAA 90 bp GCGGAGGAAGTTCGTGGGTGGAGCTGGTTGTTTGGCGCCTGCGTCTaGCGGCGAGCGGGCTGGCGTGCGGCGCCGTTGCGGGCGGGAGCG +
Preference number: 6 (lower is better)
Translates to: AEEVRGWSWLFGACV*RRAGWRAAPLRAGA
Trigger: CGCTCCCGCCCGCAACGGCGCCGCACGCCAGCCCGCTCGCCGCAAGACGCAGGCGCCAAACAACCAGCTCCACCCACGAACTTCCTCCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS GCA 72 bp TTCGTGGGTGGAGCTGGTTGTTTGGCGCCTGCGTCTTaGGGCGAGCGGGCTGGCGTGCGGCGCCGTTGCGGG +
Preference number: 6 (lower is better)
Translates to: FVGGAGCLAPAS*GERAGVRRRCG
Trigger: CCCGCAACGGCGCCGCACGCCAGCCCGCTCGCCGCAAGACGCAGGCGCCAAACAACCAGCTCCACCCACGAA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CAA 72 bp GTTCGTGGGTGGAGCTGGTTGTTTGGCGCCTGCGTCTaGCGGCGAGCGGGCTGGCGTGCGGCGCCGTTGCGG +
Preference number: 6 (lower is better)
Translates to: VRGWSWLFGACV*RRAGWRAAPLR
Trigger: CCGCAACGGCGCCGCACGCCAGCCCGCTCGCCGCAAGACGCAGGCGCCAAACAACCAGCTCCACCCACGAAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS GCA 72 bp GAGGAAGTTCGTGGGTGGAGCTGGTTGTTTGGCGCCTaGGTCTTGCGGCGAGCGGGCTGGCGTGCGGCGCCG +
Preference number: 6 (lower is better)
Translates to: EEVRGWSWLFGA*VLRRAGWRAAP
Trigger: CGGCGCCGCACGCCAGCCCGCTCGCCGCAAGACGCAGGCGCCAAACAACCAGCTCCACCCACGAACTTCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CCA 72 bp CGCGTTCAGCCCCAGGCACCACAGAGCGCTCCTAGCTaGCCGCTCCCACACCAGGGCTGCCTGCACCCGACT +
Preference number: 6 (lower is better)
Translates to: RVQPQAPQSAPS*PLPHQGCLHPT
Trigger: AGTCGGGTGCAGGCAGCCCTGGTGTGGGAGCGGCCAGCTAGGAGCGCTCTGTGGTGCCTGGGGCTGAACGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309428.10
ENST00000585726.5
ENST00000586796.1
ENST00000586870.5
ENST00000589797.5
ENST00000590541.1
ENST00000593251.5
CDS TCA 72 bp CGCCGCCTCAACCTGCTGGTCCCGCTCCCAGGAGCCTaGCACATCTCGGCGGCCCCTGAAAGTCGACCCCGA +
Preference number: 6 (lower is better)
Translates to: RRLNLLVPLPGA*HISAAPESRPR
Trigger: TCGGGGTCGACTTTCAGGGGCCGCCGAGATGTGTCAGGCTCCTGGGAGCGGGACCAGCAGGTTGAGGCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309428.10
ENST00000585726.5
ENST00000586796.1
ENST00000586870.5
ENST00000589797.5
ENST00000590541.1
ENST00000593251.5
CDS CCA 72 bp TGGAGCGGAGGAAGTTCGTGGGTGGAGCTGGTTGTTTaGCGCCTGCGTCTTGCGGCGAGCGGGCTGGCGTGC +
Preference number: 6 (lower is better)
Translates to: WSGGSSWVELVV*RLRLAASGLAC
Trigger: GCACGCCAGCCCGCTCGCCGCAAGACGCAGGCGCCAAACAACCAGCTCCACCCACGAACTTCCTCCGCTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CAA 90 bp CGATTCTCATTGGAGCGGAGGAAGTTCGTGGGTGGAGCTGGTTGTTaGGCGCCTGCGTCTTGCGGCGAGCGGGCTGGCGTGCGGCGCCGT +
Preference number: 6 (lower is better)
Translates to: RFSLERRKFVGGAGC*APASCGERAGVRRR
Trigger: ACGGCGCCGCACGCCAGCCCGCTCGCCGCAAGACGCAGGCGCCAAACAACCAGCTCCACCCACGAACTTCCTCCGCTCCAATGAGAATCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CAA 72 bp TTGGAGCGGAGGAAGTTCGTGGGTGGAGCTGGTTGTTaGGCGCCTGCGTCTTGCGGCGAGCGGGCTGGCGTG +
Preference number: 6 (lower is better)
Translates to: LERRKFVGGAGC*APASCGERAGV
Trigger: CACGCCAGCCCGCTCGCCGCAAGACGCAGGCGCCAAACAACCAGCTCCACCCACGAACTTCCTCCGCTCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CAA 72 bp CTCATTGGAGCGGAGGAAGTTCGTGGGTGGAGCTGGTaGTTTGGCGCCTGCGTCTTGCGGCGAGCGGGCTGG +
Preference number: 6 (lower is better)
Translates to: LIGAEEVRGWSW*FGACVLRRAGW
Trigger: CCAGCCCGCTCGCCGCAAGACGCAGGCGCCAAACAACCAGCTCCACCCACGAACTTCCTCCGCTCCAATGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CAA 90 bp AACTCGATTCTCATTGGAGCGGAGGAAGTTCGTGGGTGGAGCTGGTaGTTTGGCGCCTGCGTCTTGCGGCGAGCGGGCTGGCGTGCGGCG +
Preference number: 6 (lower is better)
Translates to: NSILIGAEEVRGWSW*FGACVLRRAGWRAA
Trigger: CGCCGCACGCCAGCCCGCTCGCCGCAAGACGCAGGCGCCAAACAACCAGCTCCACCCACGAACTTCCTCCGCTCCAATGAGAATCGAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS GCA 72 bp GCGCCGAGCCGCATCCGGAGCCGCGCACGCGCAATCTaGATGAACGAAGGCCAGTGCTTAAAGACGTGCCAT +
Preference number: 6 (lower is better)
Translates to: APSRIRSRARAI*MNEGQCLKTCH
Trigger: ATGGCACGTCTTTAAGCACTGGCCTTCGTTCATGCAGATTGCGCGTGCGCGGCTCCGGATGCGGCTCGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CCA 72 bp ATTCTCATTGGAGCGGAGGAAGTTCGTGGGTGGAGCTaGTTGTTTGGCGCCTGCGTCTTGCGGCGAGCGGGC +
Preference number: 6 (lower is better)
Translates to: ILIGAEEVRGWS*LFGACVLRRAG
Trigger: GCCCGCTCGCCGCAAGACGCAGGCGCCAAACAACCAGCTCCACCCACGAACTTCCTCCGCTCCAATGAGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS TCA 72 bp AGACTTCAGCTACATGGTGGCAGAGCTCGGGCACGCTaGGCAACCGAGGGTGCACAAAGCCCCAGCTATGGG +
Preference number: 6 (lower is better)
Translates to: RLQLHGGRARAR*ATEGAQSPSYG
Trigger: CCCATAGCTGGGGCTTTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589007.5
CDS GCA 72 bp TGGTGGCAGAGCTCGGGCACGCTGAGCAACCGAGGGTaGACAAAGCCCCAGCTCTCATTGTCTAATGCGTCG +
Preference number: 6 (lower is better)
Translates to: WWQSSGTLSNRG*TKPQLSLSNAS
Trigger: CGACGCATTAGACAATGAGAGCTGGGGCTTTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCTGCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000588423.1
ENST00000591547.5
CDS TCA 72 bp AGACTTCAGCTACATGGTGGCAGAGCTCGGGCACGCTaGGCAACCGAGGGTGCACAAAGCCCCAGCTCTCAT +
Preference number: 6 (lower is better)
Translates to: RLQLHGGRARAR*ATEGAQSPSSH
Trigger: ATGAGAGCTGGGGCTTTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000309428.10
ENST00000585894.5
ENST00000588423.1
ENST00000591547.5
CDS CCA 72 bp AACTCGATTCTCATTGGAGCGGAGGAAGTTCGTGGGTaGAGCTGGTTGTTTGGCGCCTGCGTCTTGCGGCGA +
Preference number: 6 (lower is better)
Translates to: NSILIGAEEVRG*SWLFGACVLRR
Trigger: TCGCCGCAAGACGCAGGCGCCAAACAACCAGCTCCACCCACGAACTTCCTCCGCTCCAATGAGAATCGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CCA 72 bp CCAGAACTCGATTCTCATTGGAGCGGAGGAAGTTCGTaGGTGGAGCTGGTTGTTTGGCGCCTGCGTCTTGCG +
Preference number: 6 (lower is better)
Translates to: PELDSHWSGGSS*VELVVWRLRLA
Trigger: CGCAAGACGCAGGCGCCAAACAACCAGCTCCACCCACGAACTTCCTCCGCTCCAATGAGAATCGAGTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS GCA 72 bp AGCCGCGCACGCGCAATCTGCATGAACGAAGGCCAGTaGTTAAAGACGTGCCATTCATTGCCAGAACTCGAT +
Preference number: 6 (lower is better)
Translates to: SRARAICMNEGQ*LKTCHSLPELD
Trigger: ATCGAGTTCTGGCAATGAATGGCACGTCTTTAAGCACTGGCCTTCGTTCATGCAGATTGCGCGTGCGCGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CAA 90 bp CCAGTGCTTAAAGACGTGCCATTCATTGCCAGAACTCGATTCTCATaGGAGCGGAGGAAGTTCGTGGGTGGAGCTGGTTGTTTGGCGCCT +
Preference number: 6 (lower is better)
Translates to: PVLKDVPFIARTRFS*ERRKFVGGAGCLAP
Trigger: AGGCGCCAAACAACCAGCTCCACCCACGAACTTCCTCCGCTCCAATGAGAATCGAGTTCTGGCAATGAATGGCACGTCTTTAAGCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CAA 90 bp GCAATCTGCATGAACGAAGGCCAGTGCTTAAAGACGTGCCATTCATaGCCAGAACTCGATTCTCATTGGAGCGGAGGAAGTTCGTGGGTG +
Preference number: 6 (lower is better)
Translates to: AICMNEGQCLKTCHS*PELDSHWSGGSSWV
Trigger: CACCCACGAACTTCCTCCGCTCCAATGAGAATCGAGTTCTGGCAATGAATGGCACGTCTTTAAGCACTGGCCTTCGTTCATGCAGATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CCA 72 bp AAGACGTGCCATTCATTGCCAGAACTCGATTCTCATTaGAGCGGAGGAAGTTCGTGGGTGGAGCTGGTTGTT +
Preference number: 6 (lower is better)
Translates to: KTCHSLPELDSH*SGGSSWVELVV
Trigger: AACAACCAGCTCCACCCACGAACTTCCTCCGCTCCAATGAGAATCGAGTTCTGGCAATGAATGGCACGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CAA 72 bp AAAGACGTGCCATTCATTGCCAGAACTCGATTCTCATaGGAGCGGAGGAAGTTCGTGGGTGGAGCTGGTTGT +
Preference number: 6 (lower is better)
Translates to: KDVPFIARTRFS*ERRKFVGGAGC
Trigger: ACAACCAGCTCCACCCACGAACTTCCTCCGCTCCAATGAGAATCGAGTTCTGGCAATGAATGGCACGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS GCA 72 bp GCAATCTGCATGAACGAAGGCCAGTGCTTAAAGACGTaGCATTCATTGCCAGAACTCGATTCTCATTGGAGC +
Preference number: 6 (lower is better)
Translates to: AICMNEGQCLKT*HSLPELDSHWS
Trigger: GCTCCAATGAGAATCGAGTTCTGGCAATGAATGGCACGTCTTTAAGCACTGGCCTTCGTTCATGCAGATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CAA 72 bp ATGAACGAAGGCCAGTGCTTAAAGACGTGCCATTCATaGCCAGAACTCGATTCTCATTGGAGCGGAGGAAGT +
Preference number: 6 (lower is better)
Translates to: MNEGQCLKTCHS*PELDSHWSGGS
Trigger: ACTTCCTCCGCTCCAATGAGAATCGAGTTCTGGCAATGAATGGCACGTCTTTAAGCACTGGCCTTCGTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588423.1
CDS CAA 90 bp ATGACAGAAAGACTCTGTAAGTCAAGCATGGACGTGCAGCCACTGTaGCATCCAAAGGTGATTCTGTTTGGGAAGAAAAGGAGCATGTCC +
Preference number: 6 (lower is better)
Translates to: MTERLCKSSMDVQPL*HPKVILFGKKRSMS
Trigger: GGACATGCTCCTTTTCTTCCCAAACAGAATCACCTTTGGATGCAACAGTGGCTGCACGTCCATGCTTGACTTACAGAGTCTTTCTGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590035.5
CDS CCA 72 bp CGTGCAGCCACTGTTGCATCCAAAGGTGATTCTGTTTaGGAAGAAAAGGAGCATGTCCCCTTCTATTCAAAC +
Preference number: 6 (lower is better)
Translates to: RAATVASKGDSV*EEKEHVPFYSN
Trigger: GTTTGAATAGAAGGGGACATGCTCCTTTTCTTCCCAAACAGAATCACCTTTGGATGCAACAGTGGCTGCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590035.5
CDS CAA 72 bp AGACTCTGTAAGTCAAGCATGGACGTGCAGCCACTGTaGCATCCAAAGGTGATTCTGTTTGGGAAGAAAAGG +
Preference number: 6 (lower is better)
Translates to: RLCKSSMDVQPL*HPKVILFGKKR
Trigger: CCTTTTCTTCCCAAACAGAATCACCTTTGGATGCAACAGTGGCTGCACGTCCATGCTTGACTTACAGAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590035.5
CDS CAA 90 bp ATCAGAGCAACAAAAAGGGATTTAATTAGTGTTCCATACCTCTCATaGTCTAATGCGTCGGGTCTTGGCACTTTTATTTCAGGCCAGATT +
Preference number: 6 (lower is better)
Translates to: IRATKRDLISVPYLS*SNASGLGTFISGQI
Trigger: AATCTGGCCTGAAATAAAAGTGCCAAGACCCGACGCATTAGACAATGAGAGGTATGGAACACTAATTAAATCCCTTTTTGTTGCTCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586796.1
CDS CAA 72 bp ACAAAAAGGGATTTAATTAGTGTTCCATACCTCTCATaGTCTAATGCGTCGGGTCTTGGCACTTTTATTTCA +
Preference number: 6 (lower is better)
Translates to: TKRDLISVPYLS*SNASGLGTFIS
Trigger: TGAAATAAAAGTGCCAAGACCCGACGCATTAGACAATGAGAGGTATGGAACACTAATTAAATCCCTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586796.1