RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RETREG2 (Homo sapiens)

Ensembl gene IDs: ENSG00000144567

Ensembl transcript IDs: ENST00000273048.2, ENST00000420189.1, ENST00000430297.7, ENST00000430747.5, ENST00000443757.5, ENST00000452022.1, ENST00000452293.5, ENST00000458520.5, ENST00000465672.1, ENST00000481925.1

Found 339 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAAGGGGAGGGGGCTGGGTCACTTCCAACAAGGCAAAGTGGAGGTaGCAGGGTGCCGGGCAGAGCAGTGAGGCCACCACTCACTGTCTC +
Preference number: 1 (lower is better)
Translates to: GRGGGWVTSNKAKWR*QGAGQSSEATTHCL
Trigger: GAGACAGTGAGTGGTGGCCTCACTGCTCTGCCCGGCACCCTGTCACCTCCACTTTGCCTTGTTGGAAGTGACCCAGCCCCCTCCCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR TCA 90 bp TCCTCTTCCTCTTCCTCCGAGTCCAGGGCTTGCCTTGACAGAGCTTaGGGACGGCCTAGTAGGTCTTCGGGAGGGGCCAGCTCTCCCTCC +
Preference number: 1 (lower is better)
Translates to: SSSSSSESRACLDRA*GRPSRSSGGASSPS
Trigger: GGAGGGAGAGCTGGCCCCTCCCGAAGACCTACTAGGCCGTCCTCAAGCTCTGTCAAGGCAAGCCCTGGACTCGGAGGAAGAGGAAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR TCA 90 bp TCAACGGCTGGCTCATGGCTCTGCCACGGCCTGAGCTTCTTGGTCTaGCTGTACCAGAGAATGGATGTCGGGCCCCAGGGGTGGAGCATC +
Preference number: 1 (lower is better)
Translates to: STAGSWLCHGLSFLV*LYQRMDVGPQGWSI
Trigger: GATGCTCCACCCCTGGGGCCCGACATCCATTCTCTGGTACAGTCAGACCAAGAAGCTCAGGCCGTGGCAGAGCCATGAGCCAGCCGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR GCA 90 bp AAGGAGGAAACAGCAACACTCCTAGCCAGGAAGCCCTACTGTGCCTaGAGCTCCTTCCTCAACGGCTGGCTCATGGCTCTGCCACGGCCT +
Preference number: 1 (lower is better)
Translates to: KEETATLLARKPYCA*SSFLNGWLMALPRP
Trigger: AGGCCGTGGCAGAGCCATGAGCCAGCCGTTGAGGAAGGAGCTGCAGGCACAGTAGGGCTTCCTGGCTAGGAGTGTTGCTGTTTCCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR GCA 90 bp CCAACTCCAGTGCTGGCGCCATGTACTGCGGGATCCCTGCTCTCCTaGATCATGAAAGGCCGGGCTGAATGGGGCAAGGATGCAGTGAAG +
Preference number: 1 (lower is better)
Translates to: PTPVLAPCTAGSLLS*IMKGRAEWGKDAVK
Trigger: CTTCACTGCATCCTTGCCCCATTCAGCCCGGCCTTTCATGATGCAGGAGAGCAGGGATCCCGCAGTACATGGCGCCAGCACTGGAGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
3UTR CCA 90 bp CTAGCCAGGAAGCCCTACTGTGCCTGCAGCTCCTTCCTCAACGGCTaGCTCATGGCTCTGCCACGGCCTGAGCTTCTTGGTCTGACTGTA +
Preference number: 1 (lower is better)
Translates to: LARKPYCACSSFLNG*LMALPRPELLGLTV
Trigger: TACAGTCAGACCAAGAAGCTCAGGCCGTGGCAGAGCCATGAGCCAGCCGTTGAGGAAGGAGCTGCAGGCACAGTAGGGCTTCCTGGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR GCA 90 bp CTGACGCTTCCTCTTGTCGTGTTTGTGATGCAGGGCATTGGCTTCTaGCTTCATGCTGTAGTCCAGCTGCATGAGCAGGGGCTCCAGGCG +
Preference number: 1 (lower is better)
Translates to: LTLPLVVFVMQGIGF*LHAVVQLHEQGLQA
Trigger: CGCCTGGAGCCCCTGCTCATGCAGCTGGACTACAGCATGAAGGCAGAAGCCAATGCCCTGCATCACAAACACGACAAGAGGAAGCGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR GCA 90 bp TACTCTTTACTTCCCAGACCAGGAGCCTCCCTAAAGCTTGGCCAGTaGCCACGGGATAGGAGGAGCTGGCAAAGGATGGGGTTGAGCTGC +
Preference number: 1 (lower is better)
Translates to: YSLLPRPGASLKLGQ*PRDRRSWQRMGLSC
Trigger: GCAGCTCAACCCCATCCTTTGCCAGCTCCTCCTATCCCGTGGGCACTGGCCAAGCTTTAGGGAGGCTCCTGGTCTGGGAAGTAAAGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
3UTR TCA 90 bp GATGCAGGGCATTGGCTTCTGCCTTCATGCTGTAGTCCAGCTGCATaGGCAGGGGCTCCAGGCGAGTGTACATCCTCTGGATCAGCTCAT +
Preference number: 1 (lower is better)
Translates to: DAGHWLLPSCCSPAA*AGAPGECTSSGSAH
Trigger: ATGAGCTGATCCAGAGGATGTACACTCGCCTGGAGCCCCTGCTCATGCAGCTGGACTACAGCATGAAGGCAGAAGCCAATGCCCTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR TCA 90 bp TCTGCCTCTTGTACTGCAGCAGCTCCTGCAGGTGAATCTGGAAGGTaGGCCAGCTCTCAGCCAGGTATCTGCACAACTCGGGCACACTCA +
Preference number: 1 (lower is better)
Translates to: SASCTAAAPAGESGR*ASSQPGICTTRAHS
Trigger: TGAGTGTGCCCGAGTTGTGCAGATACCTGGCTGAGAGCTGGCTCACCTTCCAGATTCACCTGCAGGAGCTGCTGCAGTACAAGAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452293.5
3UTR GCA 90 bp CCCAGAGGAGCAGTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATaGTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATCCCTG +
Preference number: 1 (lower is better)
Translates to: PRGAVRKLLISREST*SPTPVLAPCTAGSL
Trigger: CAGGGATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTACTGCTCCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
3UTR CCA 90 bp AGCCAACACAGCACAGCCAGAGCAGACTCGAACGCAGAACTGAGCTaGATTCTGCCTCTTGTACTGCAGCAGCTCCTGCAGGTGAATCTG +
Preference number: 1 (lower is better)
Translates to: SQHSTARADSNAELS*ILPLVLQQLLQVNL
Trigger: CAGATTCACCTGCAGGAGCTGCTGCAGTACAAGAGGCAGAATCCAGCTCAGTTCTGCGTTCGAGTCTGCTCTGGCTGTGCTGTGTTGGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452293.5
3UTR TCA 90 bp ATGTACTGCGGGATCCCTGCTCTCCTGCATCATGAAAGGCCGGGCTaGATGGGGCAAGGATGCAGTGAAGGTTACACAGACTACAGTGAC +
Preference number: 1 (lower is better)
Translates to: MYCGIPALLHHERPG*MGQGCSEGYTDYSD
Trigger: GTCACTGTAGTCTGTGTAACCTTCACTGCATCCTTGCCCCATTCAGCCCGGCCTTTCATGATGCAGGAGAGCAGGGATCCCGCAGTACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
3UTR CCA 90 bp CAGGGGCTGTCTGATGCATTTGCTGAAGCCAAAACTTCTTGGGTTTaGGTTCTGGCTCCACAATTTACTGGGACCTGTGGCCTTCAGGAA +
Preference number: 1 (lower is better)
Translates to: QGLSDAFAEAKTSWV*VLAPQFTGTCGLQE
Trigger: TTCCTGAAGGCCACAGGTCCCAGTAAATTGTGGAGCCAGAACCCAAACCCAAGAAGTTTTGGCTTCAGCAAATGCATCAGACAGCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR CCA 90 bp AATGGACAGGGGCTGTCTGATGCATTTGCTGAAGCCAAAACTTCTTaGGTTTGGGTTCTGGCTCCACAATTTACTGGGACCTGTGGCCTT +
Preference number: 1 (lower is better)
Translates to: NGQGLSDAFAEAKTS*VWVLAPQFTGTCGL
Trigger: AAGGCCACAGGTCCCAGTAAATTGTGGAGCCAGAACCCAAACCCAAGAAGTTTTGGCTTCAGCAAATGCATCAGACAGCCCCTGTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR CCA 90 bp TGTCTGATGCATTTGCTGAAGCCAAAACTTCTTGGGTTTGGGTTCTaGCTCCACAATTTACTGGGACCTGTGGCCTTCAGGAAGCTTAAC +
Preference number: 1 (lower is better)
Translates to: CLMHLLKPKLLGFGF*LHNLLGPVAFRKLN
Trigger: GTTAAGCTTCCTGAAGGCCACAGGTCCCAGTAAATTGTGGAGCCAGAACCCAAACCCAAGAAGTTTTGGCTTCAGCAAATGCATCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR GCA 90 bp TTCCTTGGCTCCAACTCATTTCTAACACAGGTAAAGGTCCTCTATTaGTTGTTTGGCTTCCCCAGTAAAGATAAATCCAGGCTGAGTGAG +
Preference number: 1 (lower is better)
Translates to: FLGSNSFLTQVKVLY*LFGFPSKDKSRLSE
Trigger: CTCACTCAGCCTGGATTTATCTTTACTGGGGAAGCCAAACAAGCAATAGAGGACCTTTACCTGTGTTAGAAATGAGTTGGAGCCAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR TCA 90 bp AGTTCCTTTAGTGGCACAGGACAGGGGCTCAATCAAACCCTAGAATaGTTCTCAGTCAAATGTGAAGCAAACAGAAAAATTCTTACACAC +
Preference number: 1 (lower is better)
Translates to: SSFSGTGQGLNQTLE*FSVKCEANRKILTH
Trigger: GTGTGTAAGAATTTTTCTGTTTGCTTCACATTTGACTGAGAATCATTCTAGGGTTTGATTGAGCCCCTGTCCTGTGCCACTAAAGGAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR TCA 90 bp AAAAGAATAGACCCTCATGAAACTCCAGGCCTATGGAGAATATTTTaGTCCAGCTACAAGCTTCTGGTTCTATTGTCAATGTCCAAGCTT +
Preference number: 1 (lower is better)
Translates to: KRIDPHETPGLWRIF*SSYKLLVLLSMSKL
Trigger: AAGCTTGGACATTGACAATAGAACCAGAAGCTTGTAGCTGGATCAAAATATTCTCCATAGGCCTGGAGTTTCATGAGGGTCTATTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR CCA 90 bp CCACATGGTAAAACACAATTTTTATGGTCCCGAATTTCTACCGATTaGGAAGACAAAGCAATTTCCTCCTGCATATACTTTATTCACACA +
Preference number: 1 (lower is better)
Translates to: PHGKTQFLWSRISTD*EDKAISSCIYFIHT
Trigger: TGTGTGAATAAAGTATATGCAGGAGGAAATTGCTTTGTCTTCCCAATCGGTAGAAATTCGGGACCATAAAAATTGTGTTTTACCATGTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
3UTR-3UTR GCA 90 bp AGAGCAGACTCGAACGCAGAACTGAGCTGGATTCTGCCTCTTGTACTGCAGCAGGGCACACTCAGCAGGTaGGGCCGGGCGCCTGACCCC +
Preference number: 2 (lower is better)
Translates to: RADSNAELSWILPLVLQQGTLSR*GRAPDP
Trigger: GGGGTCAGGCGCCCGGCCGCACCTGCTGAGTGTGCC...CTGCTGCAGTACAAGAGGCAGAATCCAGCTCAGTTCTGCGTTCGAGTCTGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452293.5
3UTR-3UTR GCA 90 bp GCAGGGAGGCAAGCGCAGGCTGTGGGAAGGACTTCCCTAGCCCTGTTCACATCCGTCCTCAGTGGTGAGTaGCTCTTCTTCCTCAGGGGC +
Preference number: 2 (lower is better)
Translates to: AGRQAQAVGRTSLALFTSVLSGE*LFFLRG
Trigger: GCCCCTGAGGAAGAAGAGGCACTCACCACTGAGGAC...GGATGTGAACAGGGCTAGGGAAGTCCTTCCCACAGCCTGCGCTTGCCTCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR-3UTR CCA 90 bp AGGCAGGCAGGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACAGGAAGGGGAGGGGGCTaGGTCACTTCCAACAAGGCA +
Preference number: 2 (lower is better)
Translates to: RQAGRGWNSYHPTASFPTGRGGG*VTSNKA
Trigger: TGCCTTGTTGGAAGTGACCCAGCCCCCTCCCCTTCC...TGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCCTGCCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR-3UTR GCA 90 bp AGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATCCCTAAAGCTTGGCCAGTaGCCACGGGATAGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: RESTCSPTPVLAPCTAGSLKLGQ*PRDRRS
Trigger: GCTCCTCCTATCCCGTGGGCACTGGCCAAGCTTTAG...GGATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
3UTR-3UTR TCA 90 bp AGACATCAGTCAGCTGCGGAGTTGTGGCCCGGGATACGGAGAAGCCACCACTCTGGTGCATTCTTCCCCTaGCGCTTCCTCTTGTCGTGT +
Preference number: 2 (lower is better)
Translates to: RHQSAAELWPGIRRSHHSGAFFP*RFLLSC
Trigger: ACACGACAAGAGGAAGCGTCAGGGGAAGAATGCACC...AGAGTGGTGGCTTCTCCGTATCCCGGGCCACAACTCCGCAGCTGACTGATGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR-3UTR TCA 90 bp AGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATCCTGCCTTGACAGAGCTTaGGGACGGCCTAGTAGGTCT +
Preference number: 2 (lower is better)
Translates to: RESTCSPTPVLAPCTAGSCLDRA*GRPSRS
Trigger: AGACCTACTAGGCCGTCCTCAAGCTCTGTCAAGGCA...GGATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR-3UTR GCA 90 bp GGAGGAAACAGCAACACTCCTAGCCAGGAAGCCCTACTGTGCCTGCAGCTCCTTGAGACATCAGTCAGCTaGGGAGTTGTGGCCCGGGAT +
Preference number: 2 (lower is better)
Translates to: GGNSNTPSQEALLCLQLLETSVS*GVVARD
Trigger: ATCCCGGGCCACAACTCCGCAGCTGACTGATGTCTC...AAGGAGCTGCAGGCACAGTAGGGCTTCCTGGCTAGGAGTGTTGCTGTTTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR-3UTR CCA 90 bp CAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATCGGGATAGGAGGAGCTaGCAAAGGATGGGGTTGAGC +
Preference number: 2 (lower is better)
Translates to: QERAHAHQLQCWRHVLRDRDRRS*QRMGLS
Trigger: GCTCAACCCCATCCTTTGCCAGCTCCTCCTATCCCG...ATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
3UTR-3UTR TCA 90 bp AAGAAAGGGCCAGACCACCAGGGCTTGGGGCATAGTGGAATGAGAATAGAGATGTGTAGTCCAGCTGCATaGGCAGGGGCTCCAGGCGAG +
Preference number: 2 (lower is better)
Translates to: KKGPDHQGLGHSGMRIEMCSPAA*AGAPGE
Trigger: CTCGCCTGGAGCCCCTGCTCATGCAGCTGGACTACA...CATCTCTATTCTCATTCCACTATGCCCCAAGCCCTGGTGGTCTGGCCCTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR-3UTR TCA 90 bp TCCCTGGAACATAGTGTCCCAACACAGCCAACACAGCACAGCCAGAGCAGACTCGGTGAATCTGGAAGGTaGGCCAGCTCTCAGCCAGGT +
Preference number: 2 (lower is better)
Translates to: SLEHSVPTQPTQHSQSRLGESGR*ASSQPG
Trigger: ACCTGGCTGAGAGCTGGCTCACCTTCCAGATTCACC...GAGTCTGCTCTGGCTGTGCTGTGTTGGCTGTGTTGGGACACTATGTTCCAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452293.5
3UTR-3UTR GCA 90 bp AGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATCCTTCACTCTCTGTCTCTaGCAGTGGCTCATCACCTCC +
Preference number: 2 (lower is better)
Translates to: RESTCSPTPVLAPCTAGSFTLCL*QWLITS
Trigger: GGAGGTGATGAGCCACTGGCAGAGACAGAGAGTGAA...GGATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR-3UTR GCA 90 bp CAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATGAAGCCAGCCAGCTCTaGCTCGCTTTCACTCTCTGT +
Preference number: 2 (lower is better)
Translates to: QERAHAHQLQCWRHVLRDEASQL*LAFTLC
Trigger: ACAGAGAGTGAAAGCGAGGCAGAGCTGGCTGGCTTC...ATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR-3UTR GCA 90 bp AGGCCACCACTCACTGTCTCGGGGCTCAGTGTCTCCACTGGTCCTCCAGGGGAGAATGGCCAAGGCCAATaGTGTTTTCTTCACATCCAC +
Preference number: 2 (lower is better)
Translates to: RPPLTVSGLSVSTGPPGENGQGQ*CFLHIH
Trigger: GTGGATGTGAAGAAAACAGCATTGGCCTTGGCCATT...CTCCCCTGGAGGACCAGTGGAGACACTGAGCCCCGAGACAGTGAGTGGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR-3UTR GCA 90 bp GTGCCTCAACTAAACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTAAGCCCTACTGTGCCTaGAGCTCCTTCCTCAACGGC +
Preference number: 2 (lower is better)
Translates to: VPQLNNQVGHEGRAAQVPKPYCA*SSFLNG
Trigger: GCCGTTGAGGAAGGAGCTGCAGGCACAGTAGGGCTT...AGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGTTTAGTTGAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
3UTR-3UTR GCA 90 bp CAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATACTGGCCTGACCCACTaGCCCAGGTTTACTCTTTAC +
Preference number: 2 (lower is better)
Translates to: QERAHAHQLQCWRHVLRDTGLTH*PRFTLY
Trigger: GTAAAGAGTAAACCTGGGGCAGTGGGTCAGGCCAGT...ATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
3UTR-3UTR TCA 90 bp CTGACCCTAGTAGGGGGTCCCACTACACTTGGATCACCCAGAGGAGCAGTAAGGCTCTTGTCGTGTTTGTaGTGCAGGGCATTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: LTLVGGPTTLGSPRGAVRLLSCL*CRALAS
Trigger: AGAAGCCAATGCCCTGCATCACAAACACGACAAGAG...CCTTACTGCTCCTCTGGGTGATCCAAGTGTAGTGGGACCCCCTACTAGGGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR-3UTR GCA 90 bp AAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTGAGGATAGGAGGAAAAAGACAGGGCATTGGCTTCTaGCTTCATGCTGTAGTCCAG +
Preference number: 2 (lower is better)
Translates to: KWDMRAEQHRSLRIGGKRQGIGF*LHAVVQ
Trigger: CTGGACTACAGCATGAAGGCAGAAGCCAATGCCCTG...TCTTTTTCCTCCTATCCTCAGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR-3UTR GCA 90 bp CACATCCTTGTGCATCTTCCTACCTGTGCCCTATTAATGGACAGGGGCTGTCTGGAGAACACAGTGCAGTaGAGGGTGTGGAAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: HILVHLPTCALLMDRGCLENTVQ*RVWKAA
Trigger: AGCTGCCTTCCACACCCTGCACTGCACTGTGTTCTC...CAGACAGCCCCTGTCCATTAATAGGGCACAGGTAGGAAGATGCACAAGGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR-3UTR TCA 90 bp GCAGTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCTCACCAACTCCAGTGGGGACCCTGCCCCATTaGAGTGCGTGTTCACAAAGT +
Preference number: 2 (lower is better)
Translates to: AVRKLLISRESTCSPTPVGTLPH*SACSQS
Trigger: ACTTTGTGAACACGCACTTCAATGGGGCAGGGTCCC...CACTGGAGTTGGTGAGCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR-3UTR TCA 90 bp AGGAAGGCTTGCCATGTCCACTCTTTGTTAAGCCAAGGCATCAGATTGGTTCTCCAACCAAGTGGGACATaGGGGCAGAGCAGCACAGGT +
Preference number: 2 (lower is better)
Translates to: RKACHVHSLLSQGIRLVLQPSGT*GQSSTG
Trigger: ACCTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTG...GAGAACCAATCTGATGCCTTGGCTTAACAAAGAGTGGACATGGCAAGCCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR-3UTR GCA 90 bp GGATCACCCAGAGGAGCAGTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCACTGGCCTGACCCACTaGCCCAGGTTTACTCTTTAC +
Preference number: 2 (lower is better)
Translates to: GSPRGAVRKLLISRESTCTGLTH*PRFTLY
Trigger: GTAAAGAGTAAACCTGGGGCAGTGGGTCAGGCCAGT...GCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTACTGCTCCTCTGGGTGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
3UTR-3UTR CCA 90 bp TATAAAGTGCCTCAACTAAACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGGACTGTACCAGAGAATaGATGTCGGGCCCCAGGGGT +
Preference number: 2 (lower is better)
Translates to: YKVPQLNNQVGHEGRAAQDCTRE*MSGPRG
Trigger: ACCCCTGGGGCCCGACATCCATTCTCTGGTACAGTC...CTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGTTTAGTTGAGGCACTTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR-3UTR GCA 90 bp GCAGTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCTCACCAACTCCAGTGCCTGCCCCATTGAAGTaGGTGTTCACAAAGTGGAGG +
Preference number: 2 (lower is better)
Translates to: AVRKLLISRESTCSPTPVPAPLK*VFTKWR
Trigger: CCTCCACTTTGTGAACACGCACTTCAATGGGGCAGG...CACTGGAGTTGGTGAGCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR CAA 90 bp GGCCATCTGCTCAGTTCTGGGCTTTTCTTCCCCAAAGAGGAAGGCTaGCCATGTCCACTCTTTGTTAAGCCAAGGCATCAGATTGGTTCT +
Preference number: 2 (lower is better)
Translates to: GHLLSSGLFFPKEEG*PCPLFVKPRHQIGS
Trigger: AGAACCAATCTGATGCCTTGGCTTAACAAAGAGTGGACATGGCAAGCCTTCCTCTTTGGGGAAGAAAAGCCCAGAACTGAGCAGATGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR-3UTR GCA 90 bp GCTTGCCATGTCCACTCTTTGTTAAGCCAAGGCATCAGATTGGTTCTCTATAGTAAGCCCTACTGTGCCTaGAGCTCCTTCCTCAACGGC +
Preference number: 2 (lower is better)
Translates to: ACHVHSLLSQGIRLVLYSKPYCA*SSFLNG
Trigger: GCCGTTGAGGAAGGAGCTGCAGGCACAGTAGGGCTT...ACTATAGAGAACCAATCTGATGCCTTGGCTTAACAAAGAGTGGACATGGCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR-3UTR CCA 90 bp TCTGTAATGGCCAAGGCCAATGCTGTTTTCTTCACATCCACCACTGGGGAGAAGTGTGATGCAGGGCATTaGCTTCTGCCTTCATGCTGT +
Preference number: 2 (lower is better)
Translates to: SVMAKANAVFFTSTTGEKCDAGH*LLPSCC
Trigger: ACAGCATGAAGGCAGAAGCCAATGCCCTGCATCACA...CTTCTCCCCAGTGGTGGATGTGAAGAAAACAGCATTGGCCTTGGCCATTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR-3UTR TCA 90 bp GCTTGCCATGTCCACTCTTTGTTAAGCCAAGGCATCAGATTGGTTCTCTATAGTGGCAAAGGATGGGGTTaGGCTGCTAAGGACAGGACA +
Preference number: 2 (lower is better)
Translates to: ACHVHSLLSQGIRLVLYSGKGWG*AAKDRT
Trigger: TGTCCTGTCCTTAGCAGCTCAACCCCATCCTTTGCC...ACTATAGAGAACCAATCTGATGCCTTGGCTTAACAAAGAGTGGACATGGCAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR-3UTR CCA 90 bp GTGCCTCAACTAAACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTCGAATTTCTACCGATTaGGAAGACAAAGCAATTTCC +
Preference number: 2 (lower is better)
Translates to: VPQLNNQVGHEGRAAQVPRISTD*EDKAIS
Trigger: GGAAATTGCTTTGTCTTCCCAATCGGTAGAAATTCG...AGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGTTTAGTTGAGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
3UTR-3UTR CCA 90 bp GTGATGAAAAGTTCGAGTTCCTTTAGTGGCACAGGACAGGGGCTCAATCAAACCGAAGCCAAAACTTCTTaGGTTTGGGTTCTGGCTCCA +
Preference number: 2 (lower is better)
Translates to: VMKSSSSFSGTGQGLNQTEAKTS*VWVLAP
Trigger: TGGAGCCAGAACCCAAACCCAAGAAGTTTTGGCTTC...GGTTTGATTGAGCCCCTGTCCTGTGCCACTAAAGGAACTCGAACTTTTCATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR CAA 90 bp AGGAAGGCTTGCCATGTCCACTCTTTGTTAAGCCAAGGCATCAGATaGGTTCTCTATAGTTCCCACATCCTTGTGCATCTTCCTACCTGT +
Preference number: 2 (lower is better)
Translates to: RKACHVHSLLSQGIR*VLYSSHILVHLPTC
Trigger: ACAGGTAGGAAGATGCACAAGGATGTGGGAACTATAGAGAACCAATCTGATGCCTTGGCTTAACAAAGAGTGGACATGGCAAGCCTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR-3UTR GCA 90 bp CCGATTGGGAAGACAAAGCAATTTCCTCCTGCATATACTTTATTCACACATGCTGAGAACACAGTGCAGTaGAGGGTGTGGAAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: PIGKTKQFPPAYTLFTHAENTVQ*RVWKAA
Trigger: AGCTGCCTTCCACACCCTGCACTGCACTGTGTTCTC...AGCATGTGTGAATAAAGTATATGCAGGAGGAAATTGCTTTGTCTTCCCAATCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
3UTR-3UTR TCA 90 bp CCGATTGGGAAGACAAAGCAATTTCCTCCTGCATATACTTTATTCACACATGCTCAGAACAGACTGGAGTaGAGCAGGTTAAGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: PIGKTKQFPPAYTLFTHAQNRLE*SRLRVR
Trigger: CCTCACCCTTAACCTGCTTCACTCCAGTCTGTTCTG...AGCATGTGTGAATAAAGTATATGCAGGAGGAAATTGCTTTGTCTTCCCAATCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
3UTR-3UTR TCA 90 bp TCACACATGCTAAATCTCACTAAACAGATCACACTGTCAAGGAAGATGGCTAAGCAGAACAGACTGGAGTaGAGCAGGTTAAGGGTGAGG +
Preference number: 2 (lower is better)
Translates to: SHMLNLTKQITLSRKMAKQNRLE*SRLRVR
Trigger: CCTCACCCTTAACCTGCTTCACTCCAGTCTGTTCTG...CTTAGCCATCTTCCTTGACAGTGTGATCTGTTTAGTGAGATTTAGCATGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
3UTR CAA 90 bp CTTGGCTCCAACTCATTTCTAACACAGGTAAAGGTCCTCTATTGCTaGTTTGGCTTCCCCAGTAAAGATAAATCCAGGCTGAGTGAGTTG +
Preference number: 2 (lower is better)
Translates to: LGSNSFLTQVKVLYC*FGFPSKDKSRLSEL
Trigger: CAACTCACTCAGCCTGGATTTATCTTTACTGGGGAAGCCAAACAAGCAATAGAGGACCTTTACCTGTGTTAGAAATGAGTTGGAGCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR-3UTR CCA 90 bp AACACAAGACAAGAGAAAAATTATAAAGTGCCTCAACTAAACAACCAAGTGGGAGTGCAGTGCAGGGTGTaGAAGGCAGCTCACAGTCAG +
Preference number: 2 (lower is better)
Translates to: NTRQEKNYKVPQLNNQVGVQCRV*KAAHSQ
Trigger: CTGACTGTGAGCTGCCTTCCACACCCTGCACTGCAC...TCCCACTTGGTTGTTTAGTTGAGGCACTTTATAATTTTTCTCTTGTCTTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
3UTR-3UTR CCA 90 bp AACACAAGACAAGAGAAAAATTATAAAGTGCCTCAACTAAACAACCAAGTGGGACAGGCAGGCAGAGGGTaGAATAGCTACCATCCGACA +
Preference number: 2 (lower is better)
Translates to: NTRQEKNYKVPQLNNQVGQAGRG*NSYHPT
Trigger: TGTCGGATGGTAGCTATTCCACCCTCTGCCTGCCTG...TCCCACTTGGTTGTTTAGTTGAGGCACTTTATAATTTTTCTCTTGTCTTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
3UTR-3UTR GCA 90 bp TATTTTGATCCAGCTACAAGCTTCTGGTTCTATTGTCAATGTCCAAGCTTAATATGTCAAGGTAATCCTTaGTTCGGCCCTGTTTTGCAA +
Preference number: 2 (lower is better)
Translates to: YFDPATSFWFYCQCPSLICQGNP*FGPVLQ
Trigger: TTGCAAAACAGGGCCGAAGCAAGGATTACCTTGACA...TATTAAGCTTGGACATTGACAATAGAACCAGAAGCTTGTAGCTGGATCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR TCA 72 bp TCTTCCTCCGAGTCCAGGGCTTGCCTTGACAGAGCTTaGGGACGGCCTAGTAGGTCTTCGGGAGGGGCCAGC +
Preference number: 3 (lower is better)
Translates to: SSSESRACLDRA*GRPSRSSGGAS
Trigger: GCTGGCCCCTCCCGAAGACCTACTAGGCCGTCCTCAAGCTCTGTCAAGGCAAGCCCTGGACTCGGAGGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR GCA 72 bp CTTCCCAGACCAGGAGCCTCCCTAAAGCTTGGCCAGTaGCCACGGGATAGGAGGAGCTGGCAAAGGATGGGG +
Preference number: 3 (lower is better)
Translates to: LPRPGASLKLGQ*PRDRRSWQRMG
Trigger: CCCCATCCTTTGCCAGCTCCTCCTATCCCGTGGGCACTGGCCAAGCTTTAGGGAGGCTCCTGGTCTGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
3UTR CCA 72 bp GCCACCACTCACTGTCTCGGGGCTCAGTGTCTCCACTaGTCCTCCAGGGGAGCATTTCACTCCATCTGGGGG +
Preference number: 3 (lower is better)
Translates to: ATTHCLGAQCLH*SSRGAFHSIWG
Trigger: CCCCCAGATGGAGTGAAATGCTCCCCTGGAGGACCAGTGGAGACACTGAGCCCCGAGACAGTGAGTGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR-3UTR CAA 90 bp AGGCAGGCAGGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACAAGTCCAGGGCTTGCCTaGACAGAGCTTGAGGACGGC +
Preference number: 3 (lower is better)
Translates to: RQAGRGWNSYHPTASFPTSPGLA*TELEDG
Trigger: GCCGTCCTCAAGCTCTGTCAAGGCAAGCCCTGGACT...TGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCCTGCCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR GCA 72 bp GTGCTGGCGCCATGTACTGCGGGATCCCTGCTCTCCTaGATCATGAAAGGCCGGGCTGAATGGGGCAAGGAT +
Preference number: 3 (lower is better)
Translates to: VLAPCTAGSLLS*IMKGRAEWGKD
Trigger: ATCCTTGCCCCATTCAGCCCGGCCTTTCATGATGCAGGAGAGCAGGGATCCCGCAGTACATGGCGCCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
3UTR GCA 72 bp CTCTGCTGGTCCAAATCCTCGGAGACATCAGTCAGCTaGGGAGTTGTGGCCCGGGATACGGAGAAGCCACCA +
Preference number: 3 (lower is better)
Translates to: LCWSKSSETSVS*GVVARDTEKPP
Trigger: TGGTGGCTTCTCCGTATCCCGGGCCACAACTCCGCAGCTGACTGATGTCTCCGAGGATTTGGACCAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR GCA 72 bp ACAGCAACACTCCTAGCCAGGAAGCCCTACTGTGCCTaGAGCTCCTTCCTCAACGGCTGGCTCATGGCTCTG +
Preference number: 3 (lower is better)
Translates to: TATLLARKPYCA*SSFLNGWLMAL
Trigger: CAGAGCCATGAGCCAGCCGTTGAGGAAGGAGCTGCAGGCACAGTAGGGCTTCCTGGCTAGGAGTGTTGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR GCA 72 bp CACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTaGGGGATCCCTGCTCTCCTGCATCATGAAAGGCCG +
Preference number: 3 (lower is better)
Translates to: HMLTNSSAGAMY*GIPALLHHERP
Trigger: CGGCCTTTCATGATGCAGGAGAGCAGGGATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
3UTR-3UTR CAA 90 bp AGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATCCCCAGACCACCAGGGCTaGGGGCATAGTGGAATGAGA +
Preference number: 3 (lower is better)
Translates to: RESTCSPTPVLAPCTAGSPDHQG*GHSGMR
Trigger: TCTCATTCCACTATGCCCCAAGCCCTGGTGGTCTGG...GGATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
3UTR CCA 72 bp CCAAATCCTCGGAGACATCAGTCAGCTGCGGAGTTGTaGCCCGGGATACGGAGAAGCCACCACTCTCCAAGA +
Preference number: 3 (lower is better)
Translates to: PNPRRHQSAAEL*PGIRRSHHSPR
Trigger: TCTTGGAGAGTGGTGGCTTCTCCGTATCCCGGGCCACAACTCCGCAGCTGACTGATGTCTCCGAGGATTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR CCA 72 bp TCTCAAGAGAGAGCACATGCTCACCAACTCCAGTGCTaGCGCCATGTACTGCGGGATCCCTGCTCTCCTGCA +
Preference number: 3 (lower is better)
Translates to: SQERAHAHQLQC*RHVLRDPCSPA
Trigger: TGCAGGAGAGCAGGGATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
3UTR-3UTR CAA 90 bp GCCCCAGGTTTACTCTTTACTTCCCAGACCAGGAGCCTCCCTAAAGCTTGGCCATCTCCTCTGGTTCACTaGGCAGGCTCTGCTGGTCCA +
Preference number: 3 (lower is better)
Translates to: APGLLFTSQTRSLPKAWPSPLVH*AGSAGP
Trigger: TGGACCAGCAGAGCCTGCCAAGTGAACCAGAGGAGA...TGGCCAAGCTTTAGGGAGGCTCCTGGTCTGGGAAGTAAAGAGTAAACCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR TCA 72 bp CATTGGCTTCTGCCTTCATGCTGTAGTCCAGCTGCATaGGCAGGGGCTCCAGGCGAGTGTACATCCTCTGGA +
Preference number: 3 (lower is better)
Translates to: HWLLPSCCSPAA*AGAPGECTSSG
Trigger: TCCAGAGGATGTACACTCGCCTGGAGCCCCTGCTCATGCAGCTGGACTACAGCATGAAGGCAGAAGCCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR TCA 72 bp TGTACTGCAGCAGCTCCTGCAGGTGAATCTGGAAGGTaGGCCAGCTCTCAGCCAGGTATCTGCACAACTCGG +
Preference number: 3 (lower is better)
Translates to: CTAAAPAGESGR*ASSQPGICTTR
Trigger: CCGAGTTGTGCAGATACCTGGCTGAGAGCTGGCTCACCTTCCAGATTCACCTGCAGGAGCTGCTGCAGTACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452293.5
3UTR CCA 72 bp AGCACAGCCAGAGCAGACTCGAACGCAGAACTGAGCTaGATTCTGCCTCTTGTACTGCAGCAGCTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: STARADSNAELS*ILPLVLQQLLQ
Trigger: CTGCAGGAGCTGCTGCAGTACAAGAGGCAGAATCCAGCTCAGTTCTGCGTTCGAGTCTGCTCTGGCTGTGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452293.5
3UTR TCA 72 bp AACACAGCACAGCCAGAGCAGACTCGAACGCAGAACTaGGCTGGATTCTGCCTCTTGTACTGCAGCAGCTCC +
Preference number: 3 (lower is better)
Translates to: NTAQPEQTRTQN*AGFCLLYCSSS
Trigger: GGAGCTGCTGCAGTACAAGAGGCAGAATCCAGCTCAGTTCTGCGTTCGAGTCTGCTCTGGCTGTGCTGTGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452293.5
3UTR GCA 72 bp CCTCTTGTCGTGTTTGTGATGCAGGGCATTGGCTTCTaGCTTCATGCTGTAGTCCAGCTGCATGAGCAGGGG +
Preference number: 3 (lower is better)
Translates to: PLVVFVMQGIGF*LHAVVQLHEQG
Trigger: CCCCTGCTCATGCAGCTGGACTACAGCATGAAGGCAGAAGCCAATGCCCTGCATCACAAACACGACAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR GCA 72 bp GCAGTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATaGTCACCAACTCCAGTGCTGGCGCCATGTACTGCG +
Preference number: 3 (lower is better)
Translates to: AVRKLLISREST*SPTPVLAPCTA
Trigger: CGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTACTGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
3UTR-3UTR CAA 90 bp GTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGGGGGACCCTGCCCCATaGAAGTGCGTGTTCACAAAG +
Preference number: 3 (lower is better)
Translates to: VRKLLISRESTCSPTPVLGDPAP*KCVFTK
Trigger: CTTTGTGAACACGCACTTCAATGGGGCAGGGTCCCC...CAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273048.2
3UTR-3UTR CAA 90 bp GGAGGAAACAGCAACACTCCTAGCCAGGAAGCCCTACTGTGCCTGCAGCTCCTTTGCTTCGGCCCTGTTTaGCAACAAGGTAATAAACAG +
Preference number: 3 (lower is better)
Translates to: GGNSNTPSQEALLCLQLLCFGPV*QQGNKQ
Trigger: CTGTTTATTACCTTGTTGCAAAACAGGGCCGAAGCA...AAGGAGCTGCAGGCACAGTAGGGCTTCCTGGCTAGGAGTGTTGCTGTTTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
3UTR CCA 72 bp CATTTGCTGAAGCCAAAACTTCTTGGGTTTGGGTTCTaGCTCCACAATTTACTGGGACCTGTGGCCTTCAGG +
Preference number: 3 (lower is better)
Translates to: HLLKPKLLGFGF*LHNLLGPVAFR
Trigger: CCTGAAGGCCACAGGTCCCAGTAAATTGTGGAGCCAGAACCCAAACCCAAGAAGTTTTGGCTTCAGCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR CCA 72 bp TCTGATGCATTTGCTGAAGCCAAAACTTCTTGGGTTTaGGTTCTGGCTCCACAATTTACTGGGACCTGTGGC +
Preference number: 3 (lower is better)
Translates to: SDAFAEAKTSWV*VLAPQFTGTCG
Trigger: GCCACAGGTCCCAGTAAATTGTGGAGCCAGAACCCAAACCCAAGAAGTTTTGGCTTCAGCAAATGCATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR-3UTR CAA 90 bp AGTTCCCACATCCTTGTGCATCTTCCTACCTGTGCCCTATTAATGGACAGGGGCCCGAATTTCTACCGATaGGGAAGACAAAGCAATTTC +
Preference number: 3 (lower is better)
Translates to: SSHILVHLPTCALLMDRGPNFYR*GRQSNF
Trigger: GAAATTGCTTTGTCTTCCCAATCGGTAGAAATTCGG...GCCCCTGTCCATTAATAGGGCACAGGTAGGAAGATGCACAAGGATGTGGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR TCA 72 bp GACCCTCATGAAACTCCAGGCCTATGGAGAATATTTTaGTCCAGCTACAAGCTTCTGGTTCTATTGTCAATG +
Preference number: 3 (lower is better)
Translates to: DPHETPGLWRIF*SSYKLLVLLSM
Trigger: CATTGACAATAGAACCAGAAGCTTGTAGCTGGATCAAAATATTCTCCATAGGCCTGGAGTTTCATGAGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR GCA 72 bp TCCAACTCATTTCTAACACAGGTAAAGGTCCTCTATTaGTTGTTTGGCTTCCCCAGTAAAGATAAATCCAGG +
Preference number: 3 (lower is better)
Translates to: SNSFLTQVKVLY*LFGFPSKDKSR
Trigger: CCTGGATTTATCTTTACTGGGGAAGCCAAACAAGCAATAGAGGACCTTTACCTGTGTTAGAAATGAGTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR CCA 72 bp AAAACACAATTTTTATGGTCCCGAATTTCTACCGATTaGGAAGACAAAGCAATTTCCTCCTGCATATACTTT +
Preference number: 3 (lower is better)
Translates to: KTQFLWSRISTD*EDKAISSCIYF
Trigger: AAAGTATATGCAGGAGGAAATTGCTTTGTCTTCCCAATCGGTAGAAATTCGGGACCATAAAAATTGTGTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp CTCTCAGCCAGGTATCTGCACAACTCGGGCACACTCAGCAGGTGCGGCCGGGCGCCACCGCCTCGGCCGTaGCCGCCTCCTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LSARYLHNSGTLSRCGRAPPPRP*PPPPLP
Trigger: AGGCAGAGGAGGAGGCGGCCACGGCCGAGGCGGTGG...CGCCCGGCCGCACCTGCTGAGTGTGCCCGAGTTGTGCAGATACCTGGCTGAGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452293.5
CDS-3UTR GCA 90 bp AGACATCAGTCAGCTGCGGAGTTGTGGCCCGGGATACGGAGAAGCCACCACTCTCACACCAGCAACCGCTaGGCCGCCGCCAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: RHQSAAELWPGIRRSHHSHTSNR*AAASTA
Trigger: GGCGGTGCTGGCGGCGGCGCAGCGGTTGCTGGTGTG...AGAGTGGTGGCTTCTCCGTATCCCGGGCCACAACTCCGCAGCTGACTGATGTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR GCA 90 bp GGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCCCCGGCCGCCTCCTCCTCTaGCTCACTGGTGGCCTCACT +
Preference number: 4 (lower is better)
Translates to: GRGWNSYHPTASFPTHCPGRLLL*LTGGLT
Trigger: AGTGAGGCCACCAGTGAGGCAGAGGAGGAGGCGGCC...GGGGCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR GCA 90 bp CTTGGCCAGTGCCCACGGGATAGGAGGAGCTGGCAAAGGATGGGGTTGAGCTGCGCCGTGACCAGGCTGTaGAGCGGCTTCTCCCACACC +
Preference number: 4 (lower is better)
Translates to: LGQCPRDRRSWQRMGLSCAVTRL*SGFSHT
Trigger: GGTGTGGGAGAAGCCGCTGCACAGCCTGGTCACGGC...GCAGCTCAACCCCATCCTTTGCCAGCTCCTCCTATCCCGTGGGCACTGGCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR TCA 90 bp GCAGGGAGGCAAGCGCAGGCTGTGGGAAGGACTTCCCTAGCCCTGTTCACATCCAAGGCAAAGTGGAGGTaGCAGGGTGCCGGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AGRQAQAVGRTSLALFTSKAKWR*QGAGQS
Trigger: GCTCTGCCCGGCACCCTGTCACCTCCACTTTGCCTT...GGATGTGAACAGGGCTAGGGAAGTCCTTCCCACAGCCTGCGCTTGCCTCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR TCA 90 bp AATCCCTGGAACATAGTGTCCCAACACAGCCAACACAGCACAGCCAGAGCAGACGTGCGGCCGGGCGCCTaGCCCCGCACCCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: NPWNIVSQHSQHSTARADVRPGA*PRTLTV
Trigger: GACAGTGAGGGTGCGGGGTCAGGCGCCCGGCCGCAC...GTCTGCTCTGGCTGTGCTGTGTTGGCTGTGTTGGGACACTATGTTCCAGGGATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452293.5
CDS-3UTR GCA 90 bp CTGCAGGTGAATCTGGAAGGTGAGCCAGCTCTCAGCCAGGTATCTGCACAACTCCACACCAGCAACCGCTaGGCCGCCGCCAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: LQVNLEGEPALSQVSAQLHTSNR*AAASTA
Trigger: GGCGGTGCTGGCGGCGGCGCAGCGGTTGCTGGTGTG...GAGTTGTGCAGATACCTGGCTGAGAGCTGGCTCACCTTCCAGATTCACCTGCAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452293.5
CDS-3UTR CCA 90 bp GTGCCTCAACTAAACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTCCACCGCCTCGGCCGTaGCCGCCTCCTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VPQLNNQVGHEGRAAQVPPPPRP*PPPPLP
Trigger: AGGCAGAGGAGGAGGCGGCCACGGCCGAGGCGGTGG...AGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGTTTAGTTGAGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR CCA 90 bp GAGGAAACAGCAACACTCCTAGCCAGGAAGCCCTACTGTGCCTGCAGCTCCTTCGGGGCAGGCAGGGGCTaGGGTGAGTCTGTCTCGGGG +
Preference number: 4 (lower is better)
Translates to: EETATLLARKPYCACSSFGAGRG*GESVSG
Trigger: CCCCGAGACAGACTCACCCCAGCCCCTGCCTGCCCC...GAAGGAGCTGCAGGCACAGTAGGGCTTCCTGGCTAGGAGTGTTGCTGTTTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420189.1
CDS-3UTR TCA 90 bp GCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCCCCAAAGGCAAAGTGGAGGTaGCAGGGTGCCGGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AEGGIATIRQPASPHTAPKAKWR*QGAGQS
Trigger: GCTCTGCCCGGCACCCTGTCACCTCCACTTTGCCTT...TGGGGCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR GCA 90 bp GCAGGGAGGCAAGCGCAGGCTGTGGGAAGGACTTCCCTAGCCCTGTTCACATCCGAGGACAGCAGAGGTTaGGGACGAGCGTCACGTGAC +
Preference number: 4 (lower is better)
Translates to: AGRQAQAVGRTSLALFTSEDSRG*GRASRD
Trigger: GTCACGTGACGCTCGTCCGCAACCTCTGCTGTCCTC...GGATGTGAACAGGGCTAGGGAAGTCCTTCCCACAGCCTGCGCTTGCCTCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR GCA 90 bp CAGGCTGTGGGAAGGACTTCCCTAGCCCTGTTCACATCCACTAACCCAAATGGACACACCAGCAACCGCTaGGCCGCCGCCAGCACCGCC +
Preference number: 4 (lower is better)
Translates to: QAVGRTSLALFTSTNPNGHTSNR*AAASTA
Trigger: GGCGGTGCTGGCGGCGGCGCAGCGGTTGCTGGTGTG...TCCATTTGGGTTAGTGGATGTGAACAGGGCTAGGGAAGTCCTTCCCACAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR GCA 90 bp GGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCCCCGCTGGCTCATGGCTCTaGCACGGCCTGAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GRGWNSYHPTASFPTHCPAGSWL*HGLSFL
Trigger: CAAGAAGCTCAGGCCGTGGCAGAGCCATGAGCCAGC...GGGGCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp TTGACAGAGCTTGAGGACGGCCTAGTAGGTCTTCGGGAGGGGCCAGCTCTCCCTTCAACGGCTGGCTCATaGCTCTGCCACGGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LTELEDGLVGLREGPALPSTAGS*LCHGLS
Trigger: GCTCAGGCCGTGGCAGAGCCATGAGCCAGCCGTTGA...AGGGAGAGCTGGCCCCTCCCGAAGACCTACTAGGCCGTCCTCAAGCTCTGTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR TCA 90 bp AGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATCCGTCCAGGGCTTGCCTTaGCAGAGCTTGAGGACGGCC +
Preference number: 4 (lower is better)
Translates to: RESTCSPTPVLAPCTAGSVQGLP*QSLRTA
Trigger: GGCCGTCCTCAAGCTCTGTCAAGGCAAGCCCTGGAC...GGATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp GCAGGGAGGCAAGCGCAGGCTGTGGGAAGGACTTCCCTAGCCCTGTTCACATCCTGCTCCAGCTCCCCCTaGTCCAGCAACTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: AGRQAQAVGRTSLALFTSCSSSP*SSNSKS
Trigger: GGACTTTGAGTTGCTGGATCAGGGGGAGCTGGAGCA...GGATGTGAACAGGGCTAGGGAAGTCCTTCCCACAGCCTGCGCTTGCCTCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp GCAGGGAGGCAAGCGCAGGCTGTGGGAAGGACTTCCCTAGCCCTGTTCACATCCCAACCAAGTGGGACATaGGGGCAGAGCAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: AGRQAQAVGRTSLALFTSQPSGT*GQSSTG
Trigger: ACCTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTG...GGATGTGAACAGGGCTAGGGAAGTCCTTCCCACAGCCTGCGCTTGCCTCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp CTTGGCCAGTGCCCACGGGATAGGAGGAGCTGGCAAAGGATGGGGTTGAGCTGCGAGACATCAGTCAGCTaGGGAGTTGTGGCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: LGQCPRDRRSWQRMGLSCETSVS*GVVARD
Trigger: ATCCCGGGCCACAACTCCGCAGCTGACTGATGTCTC...GCAGCTCAACCCCATCCTTTGCCAGCTCCTCCTATCCCGTGGGCACTGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp CTTGGCCAGTGCCCACGGGATAGGAGGAGCTGGCAAAGGATGGGGTTGAGCTGCGTCCTCAGTGGTGAGTaGCTCTTCTTCCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LGQCPRDRRSWQRMGLSCVLSGE*LFFLRG
Trigger: GCCCCTGAGGAAGAAGAGGCACTCACCACTGAGGAC...GCAGCTCAACCCCATCCTTTGCCAGCTCCTCCTATCCCGTGGGCACTGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp GCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCCCCATCAGCTGCGGAGTTGTaGCCCGGGATACGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: AEGGIATIRQPASPHTAPSAAEL*PGIRRS
Trigger: GCTTCTCCGTATCCCGGGCCACAACTCCGCAGCTGA...TGGGGCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp GCAGGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCTCAGCTGCGGAGTTGTaGCCCGGGATACGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: AGRGWNSYHPTASFPTHCSAAEL*PGIRRS
Trigger: GCTTCTCCGTATCCCGGGCCACAACTCCGCAGCTGA...GCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp GGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCCCCGGGACCCTGCCCCATTaGAGTGCGTGTTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: GRGWNSYHPTASFPTHCPGTLPH*SACSQS
Trigger: ACTTTGTGAACACGCACTTCAATGGGGCAGGGTCCC...GGGGCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp GCAGGGAGGCAAGCGCAGGCTGTGGGAAGGACTTCCCTAGCCCTGTTCACATCCGGGACCCTGCCCCATTaGAGTGCGTGTTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: AGRQAQAVGRTSLALFTSGTLPH*SACSQS
Trigger: ACTTTGTGAACACGCACTTCAATGGGGCAGGGTCCC...GGATGTGAACAGGGCTAGGGAAGTCCTTCCCACAGCCTGCGCTTGCCTCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp CTGGGTCACTTCCAACAAGGCAAAGTGGAGGTGACAGGGTGCCGGGCAGAGCAGCATGAAAGGCCGGGCTaGATGGGGCAAGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: LGHFQQGKVEVTGCRAEQHERPG*MGQGCS
Trigger: ACTGCATCCTTGCCCCATTCAGCCCGGCCTTTCATG...CTGCTCTGCCCGGCACCCTGTCACCTCCACTTTGCCTTGTTGGAAGTGACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR TCA 90 bp AGGAAGGCTTGCCATGTCCACTCTTTGTTAAGCCAAGGCATCAGATTGGTTCTCGTGCGGCCGGGCGCCTaGCCCCGCACCCTCACTGTC +
Preference number: 4 (lower is better)
Translates to: RKACHVHSLLSQGIRLVLVRPGA*PRTLTV
Trigger: GACAGTGAGGGTGCGGGGTCAGGCGCCCGGCCGCAC...GAGAACCAATCTGATGCCTTGGCTTAACAAAGAGTGGACATGGCAAGCCTTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR GCA 90 bp CTGCAGGTGAATCTGGAAGGTGAGCCAGCTCTCAGCCAGGTATCTGCACAACTCGCCGTGACCAGGCTGTaGAGCGGCTTCTCCCACACC +
Preference number: 4 (lower is better)
Translates to: LQVNLEGEPALSQVSAQLAVTRL*SGFSHT
Trigger: GGTGTGGGAGAAGCCGCTGCACAGCCTGGTCACGGC...GAGTTGTGCAGATACCTGGCTGAGAGCTGGCTCACCTTCCAGATTCACCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452293.5
CDS-3UTR GCA 90 bp GCAGGGAGGCAAGCGCAGGCTGTGGGAAGGACTTCCCTAGCCCTGTTCACATCCATCACCTCCTGGGGGTaGATTCTTCCCCTGACGCTT +
Preference number: 4 (lower is better)
Translates to: AGRQAQAVGRTSLALFTSITSWG*ILPLTL
Trigger: AAGCGTCAGGGGAAGAATGCACCCCCAGGAGGTGAT...GGATGTGAACAGGGCTAGGGAAGTCCTTCCCACAGCCTGCGCTTGCCTCCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR GCA 90 bp GGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCCCCTCACTTGGCAGGCTCTaGTGGTCCAAATCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: GRGWNSYHPTASFPTHCPSLGRL*WSKSSE
Trigger: CTCCGAGGATTTGGACCAGCAGAGCCTGCCAAGTGA...GGGGCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp AGTCCAGGGCTTGCCTTGACAGAGCTTGAGGACGGCCTAGTAGGTCTTCGGGAGACAGGTACTGCACCATaGCCAGGACAGCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SPGLALTELEDGLVGLRETGTAP*PGQQAG
Trigger: GCCTGCCTGCTGTCCTGGGCATGGTGCAGTACCTGT...CTCCCGAAGACCTACTAGGCCGTCCTCAAGCTCTGTCAAGGCAAGCCCTGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR GCA 90 bp AGGCAGGCAGGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACAGGATCCCTGCTCTCCTaGATCATGAAAGGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: RQAGRGWNSYHPTASFPTGSLLS*IMKGRA
Trigger: AGCCCGGCCTTTCATGATGCAGGAGAGCAGGGATCC...TGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCCTGCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp GGAGGAAACAGCAACACTCCTAGCCAGGAAGCCCTACTGTGCCTGCAGCTCCTTGCTGGCGCCATGTACTaGGGGATCCCTGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GGNSNTPSQEALLCLQLLAGAMY*GIPALL
Trigger: CAGGAGAGCAGGGATCCCGCAGTACATGGCGCCAGC...AAGGAGCTGCAGGCACAGTAGGGCTTCCTGGCTAGGAGTGTTGCTGTTTCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp AGACATCAGTCAGCTGCGGAGTTGTGGCCCGGGATACGGAGAAGCCACCACTCTGCTCACCAACTCCAGTaGTGGCGCCATGTACTGCGG +
Preference number: 4 (lower is better)
Translates to: RHQSAAELWPGIRRSHHSAHQLQ*WRHVLR
Trigger: CCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGC...AGAGTGGTGGCTTCTCCGTATCCCGGGCCACAACTCCGCAGCTGACTGATGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR GCA 90 bp AGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATCCGCTCACCAACTCCAGTaGTGGCGCCATGTACTGCGG +
Preference number: 4 (lower is better)
Translates to: RESTCSPTPVLAPCTAGSAHQLQ*WRHVLR
Trigger: CCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGC...GGATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp GCAGGGAGGCAAGCGCAGGCTGTGGGAAGGACTTCCCTAGCCCTGTTCACATCCGAGAACACAGTGCAGTaGAGGGTGTGGAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: AGRQAQAVGRTSLALFTSENTVQ*RVWKAA
Trigger: AGCTGCCTTCCACACCCTGCACTGCACTGTGTTCTC...GGATGTGAACAGGGCTAGGGAAGTCCTTCCCACAGCCTGCGCTTGCCTCCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp GGAAATCATAATCCCTGGAACATAGTGTCCCAACACAGCCAACACAGCACAGCCGGCACACTCAGCAGGTaGGGCCGGGCGCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: GNHNPWNIVSQHSQHSTAGTLSR*GRAPDP
Trigger: GGGGTCAGGCGCCCGGCCGCACCTGCTGAGTGTGCC...GGCTGTGCTGTGTTGGCTGTGTTGGGACACTATGTTCCAGGGATTATGATTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452293.5
CDS-3UTR CCA 90 bp GGGCTGTCTGATGCATTTGCTGAAGCCAAAACTTCTTGGGTTTGGGTTCTGGCTCCACCGCCTCGGCCGTaGCCGCCTCCTCCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GLSDAFAEAKTSWVWVLAPPPRP*PPPPLP
Trigger: AGGCAGAGGAGGAGGCGGCCACGGCCGAGGCGGTGG...AGCCAGAACCCAAACCCAAGAAGTTTTGGCTTCAGCAAATGCATCAGACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CCA 90 bp CTTGGCCAGTGCCCACGGGATAGGAGGAGCTGGCAAAGGATGGGGTTGAGCTGCAGCATCAGGGGGTTTTaGCGGTGTCTCTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LGQCPRDRRSWQRMGLSCSIRGF*RCLWLQ
Trigger: TTGGAGCCAGAGACACCGCCAAAACCCCCTGATGCT...GCAGCTCAACCCCATCCTTTGCCAGCTCCTCCTATCCCGTGGGCACTGGCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp CTTGGCCAGTGCCCACGGGATAGGAGGAGCTGGCAAAGGATGGGGTTGAGCTGCCAGGCAGGCAGAGGGTaGAATAGCTACCATCCGACA +
Preference number: 4 (lower is better)
Translates to: LGQCPRDRRSWQRMGLSCQAGRG*NSYHPT
Trigger: TGTCGGATGGTAGCTATTCCACCCTCTGCCTGCCTG...GCAGCTCAACCCCATCCTTTGCCAGCTCCTCCTATCCCGTGGGCACTGGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
3UTR CAA 72 bp GGTCCAAATCCTCGGAGACATCAGTCAGCTGCGGAGTaGTGGCCCGGGATACGGAGAAGCCACCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: GPNPRRHQSAAE*WPGIRRSHHSP
Trigger: TGGAGAGTGGTGGCTTCTCCGTATCCCGGGCCACAACTCCGCAGCTGACTGATGTCTCCGAGGATTTGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR TCA 90 bp CTGGGTCACTTCCAACAAGGCAAAGTGGAGGTGACAGGGTGCCGGGCAGAGCAGCCAAAAGTGAGACGCTaGGTAGGAAGAAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: LGHFQQGKVEVTGCRAEQPKVRR*VGRRAG
Trigger: TCCGGCCCTTCTTCCTACTCAGCGTCTCACTTTTGG...CTGCTCTGCCCGGCACCCTGTCACCTCCACTTTGCCTTGTTGGAAGTGACCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR GCA 90 bp TCCAAATCCTCGGAGACATCAGTCAGCTGCGGAGTTGTGGCCCGGGATACGGAGTGGTGGCCTCACTCATaGCTAGGCTCAGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: SKSSETSVSCGVVARDTEWWPHS*LGSDPD
Trigger: GTCTGGGTCTGAGCCTAGGCATGAGTGAGGCCACCA...CTCCGTATCCCGGGCCACAACTCCGCAGCTGACTGATGTCTCCGAGGATTTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR GCA 90 bp AAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTGAGGATAGGAGGAAAAAGAGCCGTGACCAGGCTGTaGAGCGGCTTCTCCCACACC +
Preference number: 4 (lower is better)
Translates to: KWDMRAEQHRSLRIGGKRAVTRL*SGFSHT
Trigger: GGTGTGGGAGAAGCCGCTGCACAGCCTGGTCACGGC...TCTTTTTCCTCCTATCCTCAGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR GCA 90 bp CTTGGCCAGTGCCCACGGGATAGGAGGAGCTGGCAAAGGATGGGGTTGAGCTGCCAGGGCATTGGCTTCTaGCTTCATGCTGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: LGQCPRDRRSWQRMGLSCQGIGF*LHAVVQ
Trigger: CTGGACTACAGCATGAAGGCAGAAGCCAATGCCCTG...GCAGCTCAACCCCATCCTTTGCCAGCTCCTCCTATCCCGTGGGCACTGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR GCA 90 bp GCAGGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCGAAGCCAGCCAGCTCTaGCTCGCTTTCACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: AGRGWNSYHPTASFPTHCEASQL*LAFTLC
Trigger: ACAGAGAGTGAAAGCGAGGCAGAGCTGGCTGGCTTC...GCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR GCA 90 bp AGTCCAGGGCTTGCCTTGACAGAGCTTGAGGACGGCCTAGTAGGTCTTCGGGAGCCTAGGCACAGGTACTaGACCATGCCCAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: SPGLALTELEDGLVGLREPRHRY*TMPRTA
Trigger: TGCTGTCCTGGGCATGGTGCAGTACCTGTGCCTAGG...CTCCCGAAGACCTACTAGGCCGTCCTCAAGCTCTGTCAAGGCAAGCCCTGGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR GCA 90 bp GCCCCAGGTTTACTCTTTACTTCCCAGACCAGGAGCCTCCCTAAAGCTTGGCCAGCTGGCGCCATGTACTaGGGGATCCCTGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: APGLLFTSQTRSLPKAWPAGAMY*GIPALL
Trigger: CAGGAGAGCAGGGATCCCGCAGTACATGGCGCCAGC...TGGCCAAGCTTTAGGGAGGCTCCTGGTCTGGGAAGTAAAGAGTAAACCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp GGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCCCCGTTCCCACATCCTTGTaGATCTTCCTACCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: GRGWNSYHPTASFPTHCPVPTSL*IFLPVP
Trigger: GGGCACAGGTAGGAAGATGCACAAGGATGTGGGAAC...GGGGCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CCA 90 bp GCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCCCCACTTGGCAGGCTCTGCTaGTCCAAATCCTCGGAGACA +
Preference number: 4 (lower is better)
Translates to: AEGGIATIRQPASPHTAPLGRLC*SKSSET
Trigger: TGTCTCCGAGGATTTGGACCAGCAGAGCCTGCCAAG...TGGGGCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp GCAGGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCCTTGGCAGGCTCTGCTaGTCCAAATCCTCGGAGACA +
Preference number: 4 (lower is better)
Translates to: AGRGWNSYHPTASFPTHCLGRLC*SKSSET
Trigger: TGTCTCCGAGGATTTGGACCAGCAGAGCCTGCCAAG...GCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp ACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTGAGGATAGGAGGAGGAAGGGGAGGGGGCTaGGTCACTTCCAACAAGGCA +
Preference number: 4 (lower is better)
Translates to: TTKWDMRAEQHRSLRIGGGRGGG*VTSNKA
Trigger: TGCCTTGTTGGAAGTGACCCAGCCCCCTCCCCTTCC...TCCTCCTATCCTCAGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR CCA 90 bp TTGACAGAGCTTGAGGACGGCCTAGTAGGTCTTCGGGAGGGGCCAGCTCTCCCTAGCATCAGGGGGTTTTaGCGGTGTCTCTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LTELEDGLVGLREGPALPSIRGF*RCLWLQ
Trigger: TTGGAGCCAGAGACACCGCCAAAACCCCCTGATGCT...AGGGAGAGCTGGCCCCTCCCGAAGACCTACTAGGCCGTCCTCAAGCTCTGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR CCA 90 bp GCAGGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCGGGTCCCACTACACTTaGATCACCCAGAGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: AGRGWNSYHPTASFPTHCGSHYT*ITQRSS
Trigger: ACTGCTCCTCTGGGTGATCCAAGTGTAGTGGGACCC...GCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp TCCAAATCCTCGGAGACATCAGTCAGCTGCGGAGTTGTGGCCCGGGATACGGAGTGCCTTGACAGAGCTTaGGGACGGCCTAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: SKSSETSVSCGVVARDTECLDRA*GRPSRS
Trigger: AGACCTACTAGGCCGTCCTCAAGCTCTGTCAAGGCA...CTCCGTATCCCGGGCCACAACTCCGCAGCTGACTGATGTCTCCGAGGATTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR TCA 90 bp CAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATCAACCAAGTGGGACATaGGGGCAGAGCAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: QERAHAHQLQCWRHVLRDQPSGT*GQSSTG
Trigger: ACCTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTG...ATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp GGCAAAGGAGGAAACAGCAACACTCCTAGCCAGGAAGCCCTACTGTGCCTGCAGTGCTCTCCTGCATCATaGAAGGCCGGGCTGAATGGG +
Preference number: 4 (lower is better)
Translates to: GKGGNSNTPSQEALLCLQCSPAS*KAGLNG
Trigger: CCCATTCAGCCCGGCCTTTCATGATGCAGGAGAGCA...CTGCAGGCACAGTAGGGCTTCCTGGCTAGGAGTGTTGCTGTTTCCTCCTTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp GCAGGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCCAGAACAGACTGGAGTaGAGCAGGTTAAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: AGRGWNSYHPTASFPTHCQNRLE*SRLRVR
Trigger: CCTCACCCTTAACCTGCTTCACTCCAGTCTGTTCTG...GCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp GGAGGAAACAGCAACACTCCTAGCCAGGAAGCCCTACTGTGCCTGCAGCTCCTTCCTAGGCACAGGTACTaGACCATGCCCAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: GGNSNTPSQEALLCLQLLPRHRY*TMPRTA
Trigger: TGCTGTCCTGGGCATGGTGCAGTACCTGTGCCTAGG...AAGGAGCTGCAGGCACAGTAGGGCTTCCTGGCTAGGAGTGTTGCTGTTTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp GGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCCCCTGTGATGCAGGGCATTaGCTTCTGCCTTCATGCTGT +
Preference number: 4 (lower is better)
Translates to: GRGWNSYHPTASFPTHCPCDAGH*LLPSCC
Trigger: ACAGCATGAAGGCAGAAGCCAATGCCCTGCATCACA...GGGGCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR CCA 90 bp TCCAAATCCTCGGAGACATCAGTCAGCTGCGGAGTTGTGGCCCGGGATACGGAGGCTCAGTGTCTCCACTaGTCCTCCAGGGGAGCATTT +
Preference number: 4 (lower is better)
Translates to: SKSSETSVSCGVVARDTEAQCLH*SSRGAF
Trigger: AAATGCTCCCCTGGAGGACCAGTGGAGACACTGAGC...CTCCGTATCCCGGGCCACAACTCCGCAGCTGACTGATGTCTCCGAGGATTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR CCA 90 bp AGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATCCGCTCAGTGTCTCCACTaGTCCTCCAGGGGAGCATTT +
Preference number: 4 (lower is better)
Translates to: RESTCSPTPVLAPCTAGSAQCLH*SSRGAF
Trigger: AAATGCTCCCCTGGAGGACCAGTGGAGACACTGAGC...GGATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp CTGACCCTAGTAGGGGGTCCCACTACACTTGGATCACCCAGAGGAGCAGTAAGGTTTTGGCGGTGTCTCTaGCTCCAAGCCCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LTLVGGPTTLGSPRGAVRFWRCL*LQAQLC
Trigger: GCAGAGCTGGGCTTGGAGCCAGAGACACCGCCAAAA...CCTTACTGCTCCTCTGGGTGATCCAAGTGTAGTGGGACCCCCTACTAGGGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp CAGGCTGTGGGAAGGACTTCCCTAGCCCTGTTCACATCCACTAACCCAAATGGATCAACGGCTGGCTCATaGCTCTGCCACGGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: QAVGRTSLALFTSTNPNGSTAGS*LCHGLS
Trigger: GCTCAGGCCGTGGCAGAGCCATGAGCCAGCCGTTGA...TCCATTTGGGTTAGTGGATGTGAACAGGGCTAGGGAAGTCCTTCCCACAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp AGCAACTCAAAGTCCTCAGTGGTGAGTGCCTCTTCTTCCTCAGGGGCAGGCAGGCGGGATAGGAGGAGCTaGCAAAGGATGGGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: SNSKSSVVSASSSSGAGRRDRRS*QRMGLS
Trigger: GCTCAACCCCATCCTTTGCCAGCTCCTCCTATCCCG...CCTGCCTGCCCCTGAGGAAGAAGAGGCACTCACCACTGAGGACTTTGAGTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR CCA 90 bp CAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATGTGCAGTGCAGGGTGTaGAAGGCAGCTCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: QERAHAHQLQCWRHVLRDVQCRV*KAAHSQ
Trigger: CTGACTGTGAGCTGCCTTCCACACCCTGCACTGCAC...ATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp CAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATCCAAAAGTGAGACGCTaGGTAGGAAGAAGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: QERAHAHQLQCWRHVLRDPKVRR*VGRRAG
Trigger: TCCGGCCCTTCTTCCTACTCAGCGTCTCACTTTTGG...ATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR TCA 90 bp GGCAAAGGAGGAAACAGCAACACTCCTAGCCAGGAAGCCCTACTGTGCCTGCAGAGCAGCTCCTGCAGGTaGATCTGTCAGAGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: GKGGNSNTPSQEALLCLQSSSCR*ICQSVA
Trigger: AGCCACACTCTGACAGATTCACCTGCAGGAGCTGCT...CTGCAGGCACAGTAGGGCTTCCTGGCTAGGAGTGTTGCTGTTTCCTCCTTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR TCA 90 bp TGTACATCCTCTGGATCAGCTCATGATAAACCACCAGGGGCCACAGCAGGATACTGTAGTCCAGCTGCATaGGCAGGGGCTCCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: CTSSGSAHDKPPGATAGYCSPAA*AGAPGE
Trigger: CTCGCCTGGAGCCCCTGCTCATGCAGCTGGACTACA...GTATCCTGCTGTGGCCCCTGGTGGTTTATCATGAGCTGATCCAGAGGATGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR TCA 90 bp AAGAAAGGGCCAGACCACCAGGGCTTGGGGCATAGTGGAATGAGAATAGAGATGGTCCAGGGCTTGCCTTaGCAGAGCTTGAGGACGGCC +
Preference number: 4 (lower is better)
Translates to: KKGPDHQGLGHSGMRIEMVQGLP*QSLRTA
Trigger: GGCCGTCCTCAAGCTCTGTCAAGGCAAGCCCTGGAC...CATCTCTATTCTCATTCCACTATGCCCCAAGCCCTGGTGGTCTGGCCCTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp GGATCACCCAGAGGAGCAGTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCGTCCAGGGCTTGCCTTaGCAGAGCTTGAGGACGGCC +
Preference number: 4 (lower is better)
Translates to: GSPRGAVRKLLISRESTCVQGLP*QSLRTA
Trigger: GGCCGTCCTCAAGCTCTGTCAAGGCAAGCCCTGGAC...GCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTACTGCTCCTCTGGGTGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp GGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCCCCCTGAGCTTCTTGGTCTaGCTGTACCAGAGAATGGAT +
Preference number: 4 (lower is better)
Translates to: GRGWNSYHPTASFPTHCPLSFLV*LYQRMD
Trigger: ATCCATTCTCTGGTACAGTCAGACCAAGAAGCTCAG...GGGGCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp CTCCTGCAGGTGAATCTGGAAGGTGAGCCAGCTCTCAGCCAGGTATCTGCACAATGGTGGCCTCACTCATaGCTAGGCTCAGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: LLQVNLEGEPALSQVSAQWWPHS*LGSDPD
Trigger: GTCTGGGTCTGAGCCTAGGCATGAGTGAGGCCACCA...TTGTGCAGATACCTGGCTGAGAGCTGGCTCACCTTCCAGATTCACCTGCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452293.5
CDS-3UTR GCA 90 bp AGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATCCGGGAGAAAGCGAGGCTaGCAGAGATCCAGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: RESTCSPTPVLAPCTAGSGRKRG*QRSSRK
Trigger: TTTTCTGCTGGATCTCTGGCAGCCTCGCTTTCTCCC...GGATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR GCA 90 bp TCCAAATCCTCGGAGACATCAGTCAGCTGCGGAGTTGTGGCCCGGGATACGGAGCCTGCCCCATTGAAGTaGGTGTTCACAAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SKSSETSVSCGVVARDTEPAPLK*VFTKWR
Trigger: CCTCCACTTTGTGAACACGCACTTCAATGGGGCAGG...CTCCGTATCCCGGGCCACAACTCCGCAGCTGACTGATGTCTCCGAGGATTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR GCA 90 bp TGGCTCATGGCTCTGCCACGGCCTGAGCTTCTTGGTCTGACTGTACCAGAGAATGTCCTCAGTGGTGAGTaGCTCTTCTTCCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: WLMALPRPELLGLTVPENVLSGE*LFFLRG
Trigger: GCCCCTGAGGAAGAAGAGGCACTCACCACTGAGGAC...ATTCTCTGGTACAGTCAGACCAAGAAGCTCAGGCCGTGGCAGAGCCATGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR GCA 90 bp GCCCCAGGTTTACTCTTTACTTCCCAGACCAGGAGCCTCCCTAAAGCTTGGCCACTAAAGCTTGGCCAGTaGCCACGGGATAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: APGLLFTSQTRSLPKAWPLKLGQ*PRDRRS
Trigger: GCTCCTCCTATCCCGTGGGCACTGGCCAAGCTTTAG...TGGCCAAGCTTTAGGGAGGCTCCTGGTCTGGGAAGTAAAGAGTAAACCTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp TCCAAATCCTCGGAGACATCAGTCAGCTGCGGAGTTGTGGCCCGGGATACGGAGACTGGCCTGACCCACTaGCCCAGGTTTACTCTTTAC +
Preference number: 4 (lower is better)
Translates to: SKSSETSVSCGVVARDTETGLTH*PRFTLY
Trigger: GTAAAGAGTAAACCTGGGGCAGTGGGTCAGGCCAGT...CTCCGTATCCCGGGCCACAACTCCGCAGCTGACTGATGTCTCCGAGGATTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR CCA 90 bp GTGCCTCAACTAAACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTTTTTGGCGGTGTCTCTaGCTCCAAGCCCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VPQLNNQVGHEGRAAQVPFWRCL*LQAQLC
Trigger: GCAGAGCTGGGCTTGGAGCCAGAGACACCGCCAAAA...AGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGTTTAGTTGAGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp CAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATAGCATCAGGGGGTTTTaGCGGTGTCTCTGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: QERAHAHQLQCWRHVLRDSIRGF*RCLWLQ
Trigger: TTGGAGCCAGAGACACCGCCAAAACCCCCTGATGCT...ATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp CTGACCCTAGTAGGGGGTCCCACTACACTTGGATCACCCAGAGGAGCAGTAAGGGGGTCCCACTACACTTaGATCACCCAGAGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LTLVGGPTTLGSPRGAVRGSHYT*ITQRSS
Trigger: ACTGCTCCTCTGGGTGATCCAAGTGTAGTGGGACCC...CCTTACTGCTCCTCTGGGTGATCCAAGTGTAGTGGGACCCCCTACTAGGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp CAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATCAAAGTCCTCAGTGGTaGGTGCCTCTTCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QERAHAHQLQCWRHVLRDQSPQW*VPLLPQ
Trigger: CTGAGGAAGAAGAGGCACTCACCACTGAGGACTTTG...ATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp TGGCTCATGGCTCTGCCACGGCCTGAGCTTCTTGGTCTGACTGTACCAGAGAATGGCAAAGGATGGGGTTaGGCTGCTAAGGACAGGACA +
Preference number: 4 (lower is better)
Translates to: WLMALPRPELLGLTVPENGKGWG*AAKDRT
Trigger: TGTCCTGTCCTTAGCAGCTCAACCCCATCCTTTGCC...ATTCTCTGGTACAGTCAGACCAAGAAGCTCAGGCCGTGGCAGAGCCATGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR TCA 90 bp CAGGCTGTGGGAAGGACTTCCCTAGCCCTGTTCACATCCACTAACCCAAATGGACATGAAAGGCCGGGCTaGATGGGGCAAGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: QAVGRTSLALFTSTNPNGHERPG*MGQGCS
Trigger: ACTGCATCCTTGCCCCATTCAGCCCGGCCTTTCATG...TCCATTTGGGTTAGTGGATGTGAACAGGGCTAGGGAAGTCCTTCCCACAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp TGGAACATAGTGTCCCAACACAGCCAACACAGCACAGCCAGAGCAGACTCGAACGGTGAATCTGGAAGGTaGGCCAGCTCTCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: WNIVSQHSQHSTARADSNGESGR*ASSQPG
Trigger: ACCTGGCTGAGAGCTGGCTCACCTTCCAGATTCACC...GTTCGAGTCTGCTCTGGCTGTGCTGTGTTGGCTGTGTTGGGACACTATGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452293.5
CDS-3UTR GCA 90 bp TGGCTCATGGCTCTGCCACGGCCTGAGCTTCTTGGTCTGACTGTACCAGAGAATATCACCTCCTGGGGGTaGATTCTTCCCCTGACGCTT +
Preference number: 4 (lower is better)
Translates to: WLMALPRPELLGLTVPENITSWG*ILPLTL
Trigger: AAGCGTCAGGGGAAGAATGCACCCCCAGGAGGTGAT...ATTCTCTGGTACAGTCAGACCAAGAAGCTCAGGCCGTGGCAGAGCCATGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR GCA 90 bp AGCAACTCAAAGTCCTCAGTGGTGAGTGCCTCTTCTTCCTCAGGGGCAGGCAGGTTCACTCTCTGTCTCTaGCAGTGGCTCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: SNSKSSVVSASSSSGAGRFTLCL*QWLITS
Trigger: GGAGGTGATGAGCCACTGGCAGAGACAGAGAGTGAA...CCTGCCTGCCCCTGAGGAAGAAGAGGCACTCACCACTGAGGACTTTGAGTTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR GCA 90 bp AAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTGAGGATAGGAGGAAAAAGAGAGACATCAGTCAGCTaGGGAGTTGTGGCCCGGGAT +
Preference number: 4 (lower is better)
Translates to: KWDMRAEQHRSLRIGGKRETSVS*GVVARD
Trigger: ATCCCGGGCCACAACTCCGCAGCTGACTGATGTCTC...TCTTTTTCCTCCTATCCTCAGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp GGATCACCCAGAGGAGCAGTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCACAGGTACTGCACCATaGCCAGGACAGCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GSPRGAVRKLLISRESTCTGTAP*PGQQAG
Trigger: GCCTGCCTGCTGTCCTGGGCATGGTGCAGTACCTGT...GCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTACTGCTCCTCTGGGTGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp AAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTGAGGATAGGAGGAAAAAGAGGATCCCTGCTCTCCTaGATCATGAAAGGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: KWDMRAEQHRSLRIGGKRGSLLS*IMKGRA
Trigger: AGCCCGGCCTTTCATGATGCAGGAGAGCAGGGATCC...TCTTTTTCCTCCTATCCTCAGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp AGTTCCCACATCCTTGTGCATCTTCCTACCTGTGCCCTATTAATGGACAGGGGCGCTCACCAACTCCAGTaGTGGCGCCATGTACTGCGG +
Preference number: 4 (lower is better)
Translates to: SSHILVHLPTCALLMDRGAHQLQ*WRHVLR
Trigger: CCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGC...GCCCCTGTCCATTAATAGGGCACAGGTAGGAAGATGCACAAGGATGTGGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR GCA 90 bp GCAGGGAGGCAAGCGCAGGCTGTGGGAAGGACTTCCCTAGCCCTGTTCACATCCATAAAGGAGGCCATCTaGTCAGTTCTGGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: AGRQAQAVGRTSLALFTSIKEAI*SVLGFS
Trigger: AGAAAAGCCCAGAACTGAGCAGATGGCCTCCTTTAT...GGATGTGAACAGGGCTAGGGAAGTCCTTCCCACAGCCTGCGCTTGCCTCCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CCA 90 bp AGTTCCCACATCCTTGTGCATCTTCCTACCTGTGCCCTATTAATGGACAGGGGCGGAAGGGGAGGGGGCTaGGTCACTTCCAACAAGGCA +
Preference number: 4 (lower is better)
Translates to: SSHILVHLPTCALLMDRGGRGGG*VTSNKA
Trigger: TGCCTTGTTGGAAGTGACCCAGCCCCCTCCCCTTCC...GCCCCTGTCCATTAATAGGGCACAGGTAGGAAGATGCACAAGGATGTGGGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CCA 90 bp GTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGTCAACGGCTGGCTCATaGCTCTGCCACGGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: VRKLLISRESTCSPTPVLSTAGS*LCHGLS
Trigger: GCTCAGGCCGTGGCAGAGCCATGAGCCAGCCGTTGA...CAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp GCCCCAGGTTTACTCTTTACTTCCCAGACCAGGAGCCTCCCTAAAGCTTGGCCAAAAGGCCGGGCTGAATaGGGCAAGGATGCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: APGLLFTSQTRSLPKAWPKGRAE*GKDAVK
Trigger: CTTCACTGCATCCTTGCCCCATTCAGCCCGGCCTTT...TGGCCAAGCTTTAGGGAGGCTCCTGGTCTGGGAAGTAAAGAGTAAACCTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp AAGAAAGGGCCAGACCACCAGGGCTTGGGGCATAGTGGAATGAGAATAGAGATGGGTGAATCTGGAAGGTaGGCCAGCTCTCAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: KKGPDHQGLGHSGMRIEMGESGR*ASSQPG
Trigger: ACCTGGCTGAGAGCTGGCTCACCTTCCAGATTCACC...CATCTCTATTCTCATTCCACTATGCCCCAAGCCCTGGTGGTCTGGCCCTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR GCA 90 bp GCCCCAGGTTTACTCTTTACTTCCCAGACCAGGAGCCTCCCTAAAGCTTGGCCACCTGCCCCATTGAAGTaGGTGTTCACAAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: APGLLFTSQTRSLPKAWPPAPLK*VFTKWR
Trigger: CCTCCACTTTGTGAACACGCACTTCAATGGGGCAGG...TGGCCAAGCTTTAGGGAGGCTCCTGGTCTGGGAAGTAAAGAGTAAACCTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp GTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCTGGCTCATGGCTCTaGCACGGCCTGAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: VRKLLISRESTCSPTPVLAGSWL*HGLSFL
Trigger: CAAGAAGCTCAGGCCGTGGCAGAGCCATGAGCCAGC...CAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp CACATCCTTGTGCATCTTCCTACCTGTGCCCTATTAATGGACAGGGGCTGTCTGAAGCCCTACTGTGCCTaGAGCTCCTTCCTCAACGGC +
Preference number: 4 (lower is better)
Translates to: HILVHLPTCALLMDRGCLKPYCA*SSFLNG
Trigger: GCCGTTGAGGAAGGAGCTGCAGGCACAGTAGGGCTT...CAGACAGCCCCTGTCCATTAATAGGGCACAGGTAGGAAGATGCACAAGGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR GCA 90 bp GGCAAAGGAGGAAACAGCAACACTCCTAGCCAGGAAGCCCTACTGTGCCTGCAGTCAAGAGAGAGCACATaGTCACCAACTCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GKGGNSNTPSQEALLCLQSREST*SPTPVL
Trigger: CAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTGA...CTGCAGGCACAGTAGGGCTTCCTGGCTAGGAGTGTTGCTGTTTCCTCCTTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp ACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTGAGGATAGGAGGATCAAGAGAGAGCACATaGTCACCAACTCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: TTKWDMRAEQHRSLRIGGSREST*SPTPVL
Trigger: CAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTGA...TCCTCCTATCCTCAGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp GCAGGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCTGTCAAGGTAATCCTTaGTTCGGCCCTGTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: AGRGWNSYHPTASFPTHCCQGNP*FGPVLQ
Trigger: TTGCAAAACAGGGCCGAAGCAAGGATTACCTTGACA...GCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp AGGCAGGCAGGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACATGTCAAGGTAATCCTTaGTTCGGCCCTGTTTTGCAA +
Preference number: 4 (lower is better)
Translates to: RQAGRGWNSYHPTASFPTCQGNP*FGPVLQ
Trigger: TTGCAAAACAGGGCCGAAGCAAGGATTACCTTGACA...TGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCCTGCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp GTACATCCTCTGGATCAGCTCATGATAAACCACCAGGGGCCACAGCAGGATACTCTTCACATCCACCACTaGGGAGAAGCCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: VHPLDQLMINHQGPQQDTLHIHH*GEASQL
Trigger: GAGCTGGCTGGCTTCTCCCCAGTGGTGGATGTGAAG...AGTATCCTGCTGTGGCCCCTGGTGGTTTATCATGAGCTGATCCAGAGGATGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR CCA 90 bp GGATCACCCAGAGGAGCAGTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCCACCAACTCCAGTGCTaGCGCCATGTACTGCGGGAT +
Preference number: 4 (lower is better)
Translates to: GSPRGAVRKLLISRESTCHQLQC*RHVLRD
Trigger: ATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTG...GCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTACTGCTCCTCTGGGTGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp AAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTGAGGATAGGAGGAAAAAGAGGGTCCCACTACACTTaGATCACCCAGAGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: KWDMRAEQHRSLRIGGKRGSHYT*ITQRSS
Trigger: ACTGCTCCTCTGGGTGATCCAAGTGTAGTGGGACCC...TCTTTTTCCTCCTATCCTCAGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp CAGGCTGTGGGAAGGACTTCCCTAGCCCTGTTCACATCCACTAACCCAAATGGACAAAGTCCTCAGTGGTaGGTGCCTCTTCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QAVGRTSLALFTSTNPNGQSPQW*VPLLPQ
Trigger: CTGAGGAAGAAGAGGCACTCACCACTGAGGACTTTG...TCCATTTGGGTTAGTGGATGTGAACAGGGCTAGGGAAGTCCTTCCCACAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp ACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTGAGGATAGGAGGACTGAGCTTCTTGGTCTaGCTGTACCAGAGAATGGAT +
Preference number: 4 (lower is better)
Translates to: TTKWDMRAEQHRSLRIGGLSFLV*LYQRMD
Trigger: ATCCATTCTCTGGTACAGTCAGACCAAGAAGCTCAG...TCCTCCTATCCTCAGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp GGAAGGCAGCTCACAGTCAGGGAGGCAGCAGTTCTAGCCAATCAACACTTTATTCATGAAAGGCCGGGCTaGATGGGGCAAGGATGCAGT +
Preference number: 4 (lower is better)
Translates to: GRQLTVREAAVLANQHFIHERPG*MGQGCS
Trigger: ACTGCATCCTTGCCCCATTCAGCCCGGCCTTTCATG...AATAAAGTGTTGATTGGCTAGAACTGCTGCCTCCCTGACTGTGAGCTGCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp GCAGTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCTCACCAACTCCAGTGTGCTCTCCTGCATCATaGAAGGCCGGGCTGAATGGG +
Preference number: 4 (lower is better)
Translates to: AVRKLLISRESTCSPTPVCSPAS*KAGLNG
Trigger: CCCATTCAGCCCGGCCTTTCATGATGCAGGAGAGCA...CACTGGAGTTGGTGAGCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp GTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGTGGTGGCCTCACTCATaGCTAGGCTCAGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: VRKLLISRESTCSPTPVLWWPHS*LGSDPD
Trigger: GTCTGGGTCTGAGCCTAGGCATGAGTGAGGCCACCA...CAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR GCA 90 bp TCTGTAATGGCCAAGGCCAATGCTGTTTTCTTCACATCCACCACTGGGGAGAAGCTAAAGCTTGGCCAGTaGCCACGGGATAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SVMAKANAVFFTSTTGEKLKLGQ*PRDRRS
Trigger: GCTCCTCCTATCCCGTGGGCACTGGCCAAGCTTTAG...CTTCTCCCCAGTGGTGGATGTGAAGAAAACAGCATTGGCCTTGGCCATTACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR GCA 90 bp CCCACTACACTTGGATCACCCAGAGGAGCAGTAAGGAAGCTCCTAATCTCAAGAGGATCCCTGCTCTCCTaGATCATGAAAGGCCGGGCT +
Preference number: 4 (lower is better)
Translates to: PTTLGSPRGAVRKLLISRGSLLS*IMKGRA
Trigger: AGCCCGGCCTTTCATGATGCAGGAGAGCAGGGATCC...TCTTGAGATTAGGAGCTTCCTTACTGCTCCTCTGGGTGATCCAAGTGTAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp CAGGCTGTGGGAAGGACTTCCCTAGCCCTGTTCACATCCACTAACCCAAATGGATCTCAGCCAGGTATCTaGACAACTCGGGCACACTCA +
Preference number: 4 (lower is better)
Translates to: QAVGRTSLALFTSTNPNGSQPGI*TTRAHS
Trigger: TGAGTGTGCCCGAGTTGTGCAGATACCTGGCTGAGA...TCCATTTGGGTTAGTGGATGTGAACAGGGCTAGGGAAGTCCTTCCCACAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR GCA 90 bp CAGAGCAGACTCGAACGCAGAACTGAGCTGGATTCTGCCTCTTGTACTGCAGCATCTCAGCCAGGTATCTaGACAACTCGGGCACACTCA +
Preference number: 4 (lower is better)
Translates to: QSRLERRTELDSASCTAASQPGI*TTRAHS
Trigger: TGAGTGTGCCCGAGTTGTGCAGATACCTGGCTGAGA...TGCTGCAGTACAAGAGGCAGAATCCAGCTCAGTTCTGCGTTCGAGTCTGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452293.5
CDS-3UTR GCA 90 bp GTGCCTCAACTAAACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTGCATCTTCCTACCTGTaGCCTATTAATGGACAGGGG +
Preference number: 4 (lower is better)
Translates to: VPQLNNQVGHEGRAAQVPASSYL*PINGQG
Trigger: CCCCTGTCCATTAATAGGGCACAGGTAGGAAGATGC...AGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGTTTAGTTGAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CCA 90 bp GTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGCTTCACATCCACCACTaGGGAGAAGCCAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: VRKLLISRESTCSPTPVLLHIHH*GEASQL
Trigger: GAGCTGGCTGGCTTCTCCCCAGTGGTGGATGTGAAG...CAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR CCA 90 bp CACATCCTTGTGCATCTTCCTACCTGTGCCCTATTAATGGACAGGGGCTGTCTGCTTGGCAGGCTCTGCTaGTCCAAATCCTCGGAGACA +
Preference number: 4 (lower is better)
Translates to: HILVHLPTCALLMDRGCLLGRLC*SKSSET
Trigger: TGTCTCCGAGGATTTGGACCAGCAGAGCCTGCCAAG...CAGACAGCCCCTGTCCATTAATAGGGCACAGGTAGGAAGATGCACAAGGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CCA 90 bp GGATCACCCAGAGGAGCAGTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCGCTCAGTGTCTCCACTaGTCCTCCAGGGGAGCATTT +
Preference number: 4 (lower is better)
Translates to: GSPRGAVRKLLISRESTCAQCLH*SSRGAF
Trigger: AAATGCTCCCCTGGAGGACCAGTGGAGACACTGAGC...GCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTACTGCTCCTCTGGGTGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp CCCACTACACTTGGATCACCCAGAGGAGCAGTAAGGAAGCTCCTAATCTCAAGATTTTGGCGGTGTCTCTaGCTCCAAGCCCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PTTLGSPRGAVRKLLISRFWRCL*LQAQLC
Trigger: GCAGAGCTGGGCTTGGAGCCAGAGACACCGCCAAAA...TCTTGAGATTAGGAGCTTCCTTACTGCTCCTCTGGGTGATCCAAGTGTAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp CCCACTACACTTGGATCACCCAGAGGAGCAGTAAGGAAGCTCCTAATCTCAAGAGACTGTACCAGAGAATaGATGTCGGGCCCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PTTLGSPRGAVRKLLISRDCTRE*MSGPRG
Trigger: ACCCCTGGGGCCCGACATCCATTCTCTGGTACAGTC...TCTTGAGATTAGGAGCTTCCTTACTGCTCCTCTGGGTGATCCAAGTGTAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp GGAAGGCAGCTCACAGTCAGGGAGGCAGCAGTTCTAGCCAATCAACACTTTATTGACTGTACCAGAGAATaGATGTCGGGCCCCAGGGGT +
Preference number: 4 (lower is better)
Translates to: GRQLTVREAAVLANQHFIDCTRE*MSGPRG
Trigger: ACCCCTGGGGCCCGACATCCATTCTCTGGTACAGTC...AATAAAGTGTTGATTGGCTAGAACTGCTGCCTCCCTGACTGTGAGCTGCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp GGAAGGCAGCTCACAGTCAGGGAGGCAGCAGTTCTAGCCAATCAACACTTTATTCGGGATAGGAGGAGCTaGCAAAGGATGGGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: GRQLTVREAAVLANQHFIRDRRS*QRMGLS
Trigger: GCTCAACCCCATCCTTTGCCAGCTCCTCCTATCCCG...AATAAAGTGTTGATTGGCTAGAACTGCTGCCTCCCTGACTGTGAGCTGCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp CACATCCTTGTGCATCTTCCTACCTGTGCCCTATTAATGGACAGGGGCTGTCTGAAAGGCCGGGCTGAATaGGGCAAGGATGCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: HILVHLPTCALLMDRGCLKGRAE*GKDAVK
Trigger: CTTCACTGCATCCTTGCCCCATTCAGCCCGGCCTTT...CAGACAGCCCCTGTCCATTAATAGGGCACAGGTAGGAAGATGCACAAGGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CCA 90 bp GTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGCACCAACTCCAGTGCTaGCGCCATGTACTGCGGGAT +
Preference number: 4 (lower is better)
Translates to: VRKLLISRESTCSPTPVLHQLQC*RHVLRD
Trigger: ATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTG...CAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp ACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTGAGGATAGGAGGAGAAGCCAAAACTTCTTaGGTTTGGGTTCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TTKWDMRAEQHRSLRIGGEAKTS*VWVLAP
Trigger: TGGAGCCAGAACCCAAACCCAAGAAGTTTTGGCTTC...TCCTCCTATCCTCAGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CCA 90 bp ACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTGAGGATAGGAGGATCATATGAAAACCTCTaGCCCTTTCATCGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TTKWDMRAEQHRSLRIGGSYENL*PFHRGA
Trigger: TGCCCCACGATGAAAGGGCCAGAGGTTTTCATATGA...TCCTCCTATCCTCAGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR TCA 90 bp GTACATCCTCTGGATCAGCTCATGATAAACCACCAGGGGCCACAGCAGGATACTACTCGAACGCAGAACTaGGCTGGATTCTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: VHPLDQLMINHQGPQQDTTRTQN*AGFCLL
Trigger: CAAGAGGCAGAATCCAGCTCAGTTCTGCGTTCGAGT...AGTATCCTGCTGTGGCCCCTGGTGGTTTATCATGAGCTGATCCAGAGGATGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR TCA 90 bp GCAGTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCTCACCAACTCCAGTGGGTGCATTCTTCCCCTaGCGCTTCCTCTTGTCGTGT +
Preference number: 4 (lower is better)
Translates to: AVRKLLISRESTCSPTPVGAFFP*RFLLSC
Trigger: ACACGACAAGAGGAAGCGTCAGGGGAAGAATGCACC...CACTGGAGTTGGTGAGCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR TCA 90 bp GGAAGGCAGCTCACAGTCAGGGAGGCAGCAGTTCTAGCCAATCAACACTTTATTTGCCTTGACAGAGCTTaGGGACGGCCTAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: GRQLTVREAAVLANQHFICLDRA*GRPSRS
Trigger: AGACCTACTAGGCCGTCCTCAAGCTCTGTCAAGGCA...AATAAAGTGTTGATTGGCTAGAACTGCTGCCTCCCTGACTGTGAGCTGCCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp TATAAAGTGCCTCAACTAAACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGTGCTCCAGCTCCCCCTaGTCCAGCAACTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: YKVPQLNNQVGHEGRAAQCSSSP*SSNSKS
Trigger: GGACTTTGAGTTGCTGGATCAGGGGGAGCTGGAGCA...CTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGTTTAGTTGAGGCACTTTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp GTGCCTCAACTAAACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTCTGAGCTTCTTGGTCTaGCTGTACCAGAGAATGGAT +
Preference number: 4 (lower is better)
Translates to: VPQLNNQVGHEGRAAQVPLSFLV*LYQRMD
Trigger: ATCCATTCTCTGGTACAGTCAGACCAAGAAGCTCAG...AGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGTTTAGTTGAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp GCAGGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCCTATGGAGAATATTTTaGTCCAGCTACAAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: AGRGWNSYHPTASFPTHCLWRIF*SSYKLL
Trigger: CAGAAGCTTGTAGCTGGATCAAAATATTCTCCATAG...GCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR TCA 90 bp GGATCACCCAGAGGAGCAGTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCAGGCAGAGGTTGCAGTaGACCAAGACTGCACCATTG +
Preference number: 4 (lower is better)
Translates to: GSPRGAVRKLLISRESTCRQRLQ*TKTAPL
Trigger: CAATGGTGCAGTCTTGGTTCACTGCAACCTCTGCCT...GCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTACTGCTCCTCTGGGTGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR GCA 90 bp GGGCTGTCTGATGCATTTGCTGAAGCCAAAACTTCTTGGGTTTGGGTTCTGGCTGAAGCCAGCCAGCTCTaGCTCGCTTTCACTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GLSDAFAEAKTSWVWVLAEASQL*LAFTLC
Trigger: ACAGAGAGTGAAAGCGAGGCAGAGCTGGCTGGCTTC...AGCCAGAACCCAAACCCAAGAAGTTTTGGCTTCAGCAAATGCATCAGACAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR GCA 90 bp GTGATGAAAAGTTCGAGTTCCTTTAGTGGCACAGGACAGGGGCTCAATCAAACCGTCCTCAGTGGTGAGTaGCTCTTCTTCCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VMKSSSSFSGTGQGLNQTVLSGE*LFFLRG
Trigger: GCCCCTGAGGAAGAAGAGGCACTCACCACTGAGGAC...GGTTTGATTGAGCCCCTGTCCTGTGCCACTAAAGGAACTCGAACTTTTCATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR GCA 90 bp AAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTGAGGATAGGAGGAAAAAGATCAAGAGAGAGCACATaGTCACCAACTCCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: KWDMRAEQHRSLRIGGKRSREST*SPTPVL
Trigger: CAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTGA...TCTTTTTCCTCCTATCCTCAGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp TCCAAATCCTCGGAGACATCAGTCAGCTGCGGAGTTGTGGCCCGGGATACGGAGTTTCAAGTCAACACCTaGACAGATGTTAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: SKSSETSVSCGVVARDTEFQVNT*TDVSVH
Trigger: GTGGACACTAACATCTGTGCAGGTGTTGACTTGAAA...CTCCGTATCCCGGGCCACAACTCCGCAGCTGACTGATGTCTCCGAGGATTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR GCA 90 bp CCCACTACACTTGGATCACCCAGAGGAGCAGTAAGGAAGCTCCTAATCTCAAGAGAGAACACAGTGCAGTaGAGGGTGTGGAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PTTLGSPRGAVRKLLISRENTVQ*RVWKAA
Trigger: AGCTGCCTTCCACACCCTGCACTGCACTGTGTTCTC...TCTTGAGATTAGGAGCTTCCTTACTGCTCCTCTGGGTGATCCAAGTGTAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp GATCCAGCTACAAGCTTCTGGTTCTATTGTCAATGTCCAAGCTTAATAAGAAAAGGCACACTCAGCAGGTaGGGCCGGGCGCCTGACCCC +
Preference number: 4 (lower is better)
Translates to: DPATSFWFYCQCPSLIRKGTLSR*GRAPDP
Trigger: GGGGTCAGGCGCCCGGCCGCACCTGCTGAGTGTGCC...TTTTCTTATTAAGCTTGGACATTGACAATAGAACCAGAAGCTTGTAGCTGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CCA 90 bp GCCCCAGGTTTACTCTTTACTTCCCAGACCAGGAGCCTCCCTAAAGCTTGGCCAAACGCAGAACTGAGCTaGATTCTGCCTCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: APGLLFTSQTRSLPKAWPNAELS*ILPLVL
Trigger: CAGTACAAGAGGCAGAATCCAGCTCAGTTCTGCGTT...TGGCCAAGCTTTAGGGAGGCTCCTGGTCTGGGAAGTAAAGAGTAAACCTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR CCA 90 bp GTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGCTCCTCTGGTTCACTTaGCAGGCTCTGCTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: VRKLLISRESTCSPTPVLLLWFT*QALLVQ
Trigger: TTGGACCAGCAGAGCCTGCCAAGTGAACCAGAGGAG...CAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp CCCACTACACTTGGATCACCCAGAGGAGCAGTAAGGAAGCTCCTAATCTCAAGACTCCTCTGGTTCACTTaGCAGGCTCTGCTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: PTTLGSPRGAVRKLLISRLLWFT*QALLVQ
Trigger: TTGGACCAGCAGAGCCTGCCAAGTGAACCAGAGGAG...TCTTGAGATTAGGAGCTTCCTTACTGCTCCTCTGGGTGATCCAAGTGTAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp GCAGTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCTCACCAACTCCAGTGCAGGCAGGCAGAGGGTaGAATAGCTACCATCCGACA +
Preference number: 4 (lower is better)
Translates to: AVRKLLISRESTCSPTPVQAGRG*NSYHPT
Trigger: TGTCGGATGGTAGCTATTCCACCCTCTGCCTGCCTG...CACTGGAGTTGGTGAGCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp GCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCCCCATTCTTCAGTGTTCCTTaGCTCCAACTCATTTCTAAC +
Preference number: 4 (lower is better)
Translates to: AEGGIATIRQPASPHTAPFFSVP*LQLISN
Trigger: GTTAGAAATGAGTTGGAGCCAAGGAACACTGAAGAA...TGGGGCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR TCA 90 bp AGGAAGGCTTGCCATGTCCACTCTTTGTTAAGCCAAGGCATCAGATTGGTTCTCGGTGCATTCTTCCCCTaGCGCTTCCTCTTGTCGTGT +
Preference number: 4 (lower is better)
Translates to: RKACHVHSLLSQGIRLVLGAFFP*RFLLSC
Trigger: ACACGACAAGAGGAAGCGTCAGGGGAAGAATGCACC...GAGAACCAATCTGATGCCTTGGCTTAACAAAGAGTGGACATGGCAAGCCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR TCA 90 bp TCTGTAATGGCCAAGGCCAATGCTGTTTTCTTCACATCCACCACTGGGGAGAAGCAAAGTCCTCAGTGGTaGGTGCCTCTTCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SVMAKANAVFFTSTTGEKQSPQW*VPLLPQ
Trigger: CTGAGGAAGAAGAGGCACTCACCACTGAGGACTTTG...CTTCTCCCCAGTGGTGGATGTGAAGAAAACAGCATTGGCCTTGGCCATTACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR TCA 90 bp TATAAAGTGCCTCAACTAAACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGGGCAAAGGATGGGGTTaGGCTGCTAAGGACAGGACA +
Preference number: 4 (lower is better)
Translates to: YKVPQLNNQVGHEGRAAQGKGWG*AAKDRT
Trigger: TGTCCTGTCCTTAGCAGCTCAACCCCATCCTTTGCC...CTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGTTTAGTTGAGGCACTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp AGACATCAGTCAGCTGCGGAGTTGTGGCCCGGGATACGGAGAAGCCACCACTCTTTACACAGACTACAGTaGCCTAAGAGTGTAACTACT +
Preference number: 4 (lower is better)
Translates to: RHQSAAELWPGIRRSHHSLHRLQ*PKSVTT
Trigger: AGTAGTTACACTCTTAGGTCACTGTAGTCTGTGTAA...AGAGTGGTGGCTTCTCCGTATCCCGGGCCACAACTCCGCAGCTGACTGATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR TCA 90 bp GCAGGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCTTTCTTTTACTCATATaGAAACCTCTGGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: AGRGWNSYHPTASFPTHCFLLLI*KPLALS
Trigger: TGAAAGGGCCAGAGGTTTTCATATGAGTAAAAGAAA...GCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR GCA 90 bp GTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGCAGGGCATTGGCTTCTaGCTTCATGCTGTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: VRKLLISRESTCSPTPVLQGIGF*LHAVVQ
Trigger: CTGGACTACAGCATGAAGGCAGAAGCCAATGCCCTG...CAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR GCA 90 bp TATAAAGTGCCTCAACTAAACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGTCACTTGGCAGGCTCTaGTGGTCCAAATCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: YKVPQLNNQVGHEGRAAQSLGRL*WSKSSE
Trigger: CTCCGAGGATTTGGACCAGCAGAGCCTGCCAAGTGA...CTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGTTTAGTTGAGGCACTTTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp GGTTGTCAAGGTAATCCTTGCTTCGGCCCTGTTTTGCAACAAGGTAATAAACAGACAGGTACTGCACCATaGCCAGGACAGCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GCQGNPCFGPVLQQGNKQTGTAP*PGQQAG
Trigger: GCCTGCCTGCTGTCCTGGGCATGGTGCAGTACCTGT...CTGTTTATTACCTTGTTGCAAAACAGGGCCGAAGCAAGGATTACCTTGACAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp GGAAGGCAGCTCACAGTCAGGGAGGCAGCAGTTCTAGCCAATCAACACTTTATTACTGGCCTGACCCACTaGCCCAGGTTTACTCTTTAC +
Preference number: 4 (lower is better)
Translates to: GRQLTVREAAVLANQHFITGLTH*PRFTLY
Trigger: GTAAAGAGTAAACCTGGGGCAGTGGGTCAGGCCAGT...AATAAAGTGTTGATTGGCTAGAACTGCTGCCTCCCTGACTGTGAGCTGCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp GGTTGTCAAGGTAATCCTTGCTTCGGCCCTGTTTTGCAACAAGGTAATAAACAGTCAGCTGCGGAGTTGTaGCCCGGGATACGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: GCQGNPCFGPVLQQGNKQSAAEL*PGIRRS
Trigger: GCTTCTCCGTATCCCGGGCCACAACTCCGCAGCTGA...CTGTTTATTACCTTGTTGCAAAACAGGGCCGAAGCAAGGATTACCTTGACAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp CCGATTGGGAAGACAAAGCAATTTCCTCCTGCATATACTTTATTCACACATGCTTGTAGTCCAGCTGCATaGGCAGGGGCTCCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: PIGKTKQFPPAYTLFTHACSPAA*AGAPGE
Trigger: CTCGCCTGGAGCCCCTGCTCATGCAGCTGGACTACA...AGCATGTGTGAATAAAGTATATGCAGGAGGAAATTGCTTTGTCTTCCCAATCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR TCA 90 bp CTGACCCTAGTAGGGGGTCCCACTACACTTGGATCACCCAGAGGAGCAGTAAGGTTACACAGACTACAGTaGCCTAAGAGTGTAACTACT +
Preference number: 4 (lower is better)
Translates to: LTLVGGPTTLGSPRGAVRLHRLQ*PKSVTT
Trigger: AGTAGTTACACTCTTAGGTCACTGTAGTCTGTGTAA...CCTTACTGCTCCTCTGGGTGATCCAAGTGTAGTGGGACCCCCTACTAGGGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp GTGATGAAAAGTTCGAGTTCCTTTAGTGGCACAGGACAGGGGCTCAATCAAACCCAGAACAGACTGGAGTaGAGCAGGTTAAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VMKSSSSFSGTGQGLNQTQNRLE*SRLRVR
Trigger: CCTCACCCTTAACCTGCTTCACTCCAGTCTGTTCTG...GGTTTGATTGAGCCCCTGTCCTGTGCCACTAAAGGAACTCGAACTTTTCATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR TCA 90 bp AAGAAAGGGCCAGACCACCAGGGCTTGGGGCATAGTGGAATGAGAATAGAGATGAAGAATAGACCCTCATaGAACTCCAGGCCTATGGAG +
Preference number: 4 (lower is better)
Translates to: KKGPDHQGLGHSGMRIEMKNRPS*NSRPME
Trigger: CTCCATAGGCCTGGAGTTTCATGAGGGTCTATTCTT...CATCTCTATTCTCATTCCACTATGCCCCAAGCCCTGGTGGTCTGGCCCTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR GCA 90 bp GTGATGAAAAGTTCGAGTTCCTTTAGTGGCACAGGACAGGGGCTCAATCAAACCGGGAGAAAGCGAGGCTaGCAGAGATCCAGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: VMKSSSSFSGTGQGLNQTGRKRG*QRSSRK
Trigger: TTTTCTGCTGGATCTCTGGCAGCCTCGCTTTCTCCC...GGTTTGATTGAGCCCCTGTCCTGTGCCACTAAAGGAACTCGAACTTTTCATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR GCA 90 bp GCAGGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCAAAGATAGGACATGTTaGAGTCATTGCCTGATTAAT +
Preference number: 4 (lower is better)
Translates to: AGRGWNSYHPTASFPTHCKDRTC*SHCLIN
Trigger: ATTAATCAGGCAATGACTGCAACATGTCCTATCTTT...GCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CCA 90 bp GGTTGTCAAGGTAATCCTTGCTTCGGCCCTGTTTTGCAACAAGGTAATAAACAGCGGGATAGGAGGAGCTaGCAAAGGATGGGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: GCQGNPCFGPVLQQGNKQRDRRS*QRMGLS
Trigger: GCTCAACCCCATCCTTTGCCAGCTCCTCCTATCCCG...CTGTTTATTACCTTGTTGCAAAACAGGGCCGAAGCAAGGATTACCTTGACAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp GGCAAAGGAGGAAACAGCAACACTCCTAGCCAGGAAGCCCTACTGTGCCTGCAGCGAATTTCTACCGATTaGGAAGACAAAGCAATTTCC +
Preference number: 4 (lower is better)
Translates to: GKGGNSNTPSQEALLCLQRISTD*EDKAIS
Trigger: GGAAATTGCTTTGTCTTCCCAATCGGTAGAAATTCG...CTGCAGGCACAGTAGGGCTTCCTGGCTAGGAGTGTTGCTGTTTCCTCCTTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp CCACATGGTAAAACACAATTTTTATGGTCCCGAATTTCTACCGATTGGGAAGACGCTGGCTCATGGCTCTaGCACGGCCTGAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PHGKTQFLWSRISTDWEDAGSWL*HGLSFL
Trigger: CAAGAAGCTCAGGCCGTGGCAGAGCCATGAGCCAGC...GTCTTCCCAATCGGTAGAAATTCGGGACCATAAAAATTGTGTTTTACCATGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp CCCACTACACTTGGATCACCCAGAGGAGCAGTAAGGAAGCTCCTAATCTCAAGAAACGCAGAACTGAGCTaGATTCTGCCTCTTGTACTG +
Preference number: 4 (lower is better)
Translates to: PTTLGSPRGAVRKLLISRNAELS*ILPLVL
Trigger: CAGTACAAGAGGCAGAATCCAGCTCAGTTCTGCGTT...TCTTGAGATTAGGAGCTTCCTTACTGCTCCTCTGGGTGATCCAAGTGTAGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR CCA 90 bp GCTTGCCATGTCCACTCTTTGTTAAGCCAAGGCATCAGATTGGTTCTCTATAGTCTCCTCTGGTTCACTTaGCAGGCTCTGCTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: ACHVHSLLSQGIRLVLYSLLWFT*QALLVQ
Trigger: TTGGACCAGCAGAGCCTGCCAAGTGAACCAGAGGAG...ACTATAGAGAACCAATCTGATGCCTTGGCTTAACAAAGAGTGGACATGGCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CCA 90 bp TTTTTATGGTCCCGAATTTCTACCGATTGGGAAGACAAAGCAATTTCCTCCTGCCTGGCCCTTTCATCGTaGGGCATGAACCGGCCAAGA +
Preference number: 4 (lower is better)
Translates to: FLWSRISTDWEDKAISSCLALSS*GMNRPR
Trigger: TCTTGGCCGGTTCATGCCCCACGATGAAAGGGCCAG...GCAGGAGGAAATTGCTTTGTCTTCCCAATCGGTAGAAATTCGGGACCATAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR TCA 90 bp TCACACATGCTAAATCTCACTAAACAGATCACACTGTCAAGGAAGATGGCTAAGCAACCAAGTGGGACATaGGGGCAGAGCAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: SHMLNLTKQITLSRKMAKQPSGT*GQSSTG
Trigger: ACCTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTG...CTTAGCCATCTTCCTTGACAGTGTGATCTGTTTAGTGAGATTTAGCATGTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp AAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTGAGGATAGGAGGAAAAAGATTACACAGACTACAGTaGCCTAAGAGTGTAACTACT +
Preference number: 4 (lower is better)
Translates to: KWDMRAEQHRSLRIGGKRLHRLQ*PKSVTT
Trigger: AGTAGTTACACTCTTAGGTCACTGTAGTCTGTGTAA...TCTTTTTCCTCCTATCCTCAGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp TCTGTAATGGCCAAGGCCAATGCTGTTTTCTTCACATCCACCACTGGGGAGAAGAATGGCCAAGGCCAATaGTGTTTTCTTCACATCCAC +
Preference number: 4 (lower is better)
Translates to: SVMAKANAVFFTSTTGEKNGQGQ*CFLHIH
Trigger: GTGGATGTGAAGAAAACAGCATTGGCCTTGGCCATT...CTTCTCCCCAGTGGTGGATGTGAAGAAAACAGCATTGGCCTTGGCCATTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS-3UTR GCA 90 bp CCGATTGGGAAGACAAAGCAATTTCCTCCTGCATATACTTTATTCACACATGCTCTAAAGCTTGGCCAGTaGCCACGGGATAGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: PIGKTKQFPPAYTLFTHALKLGQ*PRDRRS
Trigger: GCTCCTCCTATCCCGTGGGCACTGGCCAAGCTTTAG...AGCATGTGTGAATAAAGTATATGCAGGAGGAAATTGCTTTGTCTTCCCAATCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp GGATCACCCAGAGGAGCAGTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCTTTCAAGTCAACACCTaGACAGATGTTAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: GSPRGAVRKLLISRESTCFQVNT*TDVSVH
Trigger: GTGGACACTAACATCTGTGCAGGTGTTGACTTGAAA...GCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTACTGCTCCTCTGGGTGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp GTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCTTCGGCCCTGTTTTaGAACAAGGTAATAAACAGC +
Preference number: 4 (lower is better)
Translates to: VRKLLISRESTCSPTPVLASALF*NKVINS
Trigger: GCTGTTTATTACCTTGTTGCAAAACAGGGCCGAAGC...CAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp CCACATGGTAAAACACAATTTTTATGGTCCCGAATTTCTACCGATTGGGAAGACGTGCAGTGCAGGGTGTaGAAGGCAGCTCACAGTCAG +
Preference number: 4 (lower is better)
Translates to: PHGKTQFLWSRISTDWEDVQCRV*KAAHSQ
Trigger: CTGACTGTGAGCTGCCTTCCACACCCTGCACTGCAC...GTCTTCCCAATCGGTAGAAATTCGGGACCATAAAAATTGTGTTTTACCATGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CCA 90 bp GTGATGAAAAGTTCGAGTTCCTTTAGTGGCACAGGACAGGGGCTCAATCAAACCCTTGGGTTTGGGTTCTaGCTCCACAATTTACTGGGA +
Preference number: 4 (lower is better)
Translates to: VMKSSSSFSGTGQGLNQTLGFGF*LHNLLG
Trigger: TCCCAGTAAATTGTGGAGCCAGAACCCAAACCCAAG...GGTTTGATTGAGCCCCTGTCCTGTGCCACTAAAGGAACTCGAACTTTTCATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR TCA 90 bp CCACATGGTAAAACACAATTTTTATGGTCCCGAATTTCTACCGATTGGGAAGACTGCCTTGACAGAGCTTaGGGACGGCCTAGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: PHGKTQFLWSRISTDWEDCLDRA*GRPSRS
Trigger: AGACCTACTAGGCCGTCCTCAAGCTCTGTCAAGGCA...GTCTTCCCAATCGGTAGAAATTCGGGACCATAAAAATTGTGTTTTACCATGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp TTTTTATGGTCCCGAATTTCTACCGATTGGGAAGACAAAGCAATTTCCTCCTGCCCTGCCCCATTGAAGTaGGTGTTCACAAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FLWSRISTDWEDKAISSCPAPLK*VFTKWR
Trigger: CCTCCACTTTGTGAACACGCACTTCAATGGGGCAGG...GCAGGAGGAAATTGCTTTGTCTTCCCAATCGGTAGAAATTCGGGACCATAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp AACACAAGACAAGAGAAAAATTATAAAGTGCCTCAACTAAACAACCAAGTGGGAGCTGGCGCCATGTACTaGGGGATCCCTGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: NTRQEKNYKVPQLNNQVGAGAMY*GIPALL
Trigger: CAGGAGAGCAGGGATCCCGCAGTACATGGCGCCAGC...TCCCACTTGGTTGTTTAGTTGAGGCACTTTATAATTTTTCTCTTGTCTTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp AGGAAGGCTTGCCATGTCCACTCTTTGTTAAGCCAAGGCATCAGATTGGTTCTCGTAAAGGTCCTCTATTaGTTGTTTGGCTTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: RKACHVHSLLSQGIRLVLVKVLY*LFGFPS
Trigger: ACTGGGGAAGCCAAACAAGCAATAGAGGACCTTTAC...GAGAACCAATCTGATGCCTTGGCTTAACAAAGAGTGGACATGGCAAGCCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR GCA 90 bp TTTTTATGGTCCCGAATTTCTACCGATTGGGAAGACAAAGCAATTTCCTCCTGCGCAGTGAACCAAGACTaGACCATTGCACTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: FLWSRISTDWEDKAISSCAVNQD*TIALQP
Trigger: AGGCTGGAGTGCAATGGTGCAGTCTTGGTTCACTGC...GCAGGAGGAAATTGCTTTGTCTTCCCAATCGGTAGAAATTCGGGACCATAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR TCA 90 bp CCGATTGGGAAGACAAAGCAATTTCCTCCTGCATATACTTTATTCACACATGCTACTCGAACGCAGAACTaGGCTGGATTCTGCCTCTTG +
Preference number: 4 (lower is better)
Translates to: PIGKTKQFPPAYTLFTHATRTQN*AGFCLL
Trigger: CAAGAGGCAGAATCCAGCTCAGTTCTGCGTTCGAGT...AGCATGTGTGAATAAAGTATATGCAGGAGGAAATTGCTTTGTCTTCCCAATCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR TCA 90 bp TCACACATGCTAAATCTCACTAAACAGATCACACTGTCAAGGAAGATGGCTAAGCTCTTGTCGTGTTTGTaGTGCAGGGCATTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SHMLNLTKQITLSRKMAKLLSCL*CRALAS
Trigger: AGAAGCCAATGCCCTGCATCACAAACACGACAAGAG...CTTAGCCATCTTCCTTGACAGTGTGATCTGTTTAGTGAGATTTAGCATGTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR TCA 90 bp TATTTTGATCCAGCTACAAGCTTCTGGTTCTATTGTCAATGTCCAAGCTTAATATGCTCCAGCTCCCCCTaGTCCAGCAACTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: YFDPATSFWFYCQCPSLICSSSP*SSNSKS
Trigger: GGACTTTGAGTTGCTGGATCAGGGGGAGCTGGAGCA...TATTAAGCTTGGACATTGACAATAGAACCAGAAGCTTGTAGCTGGATCAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR TCA 90 bp AACACAAGACAAGAGAAAAATTATAAAGTGCCTCAACTAAACAACCAAGTGGGATGCTCTCCTGCATCATaGAAGGCCGGGCTGAATGGG +
Preference number: 4 (lower is better)
Translates to: NTRQEKNYKVPQLNNQVGCSPAS*KAGLNG
Trigger: CCCATTCAGCCCGGCCTTTCATGATGCAGGAGAGCA...TCCCACTTGGTTGTTTAGTTGAGGCACTTTATAATTTTTCTCTTGTCTTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp AACACAAGACAAGAGAAAAATTATAAAGTGCCTCAACTAAACAACCAAGTGGGAAAGCCCTACTGTGCCTaGAGCTCCTTCCTCAACGGC +
Preference number: 4 (lower is better)
Translates to: NTRQEKNYKVPQLNNQVGKPYCA*SSFLNG
Trigger: GCCGTTGAGGAAGGAGCTGCAGGCACAGTAGGGCTT...TCCCACTTGGTTGTTTAGTTGAGGCACTTTATAATTTTTCTCTTGTCTTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp AAAACACAATTTTTATGGTCCCGAATTTCTACCGATTGGGAAGACAAAGCAATTAAGCCCTACTGTGCCTaGAGCTCCTTCCTCAACGGC +
Preference number: 4 (lower is better)
Translates to: KTQFLWSRISTDWEDKAIKPYCA*SSFLNG
Trigger: GCCGTTGAGGAAGGAGCTGCAGGCACAGTAGGGCTT...AATTGCTTTGTCTTCCCAATCGGTAGAAATTCGGGACCATAAAAATTGTGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp TATTTTGATCCAGCTACAAGCTTCTGGTTCTATTGTCAATGTCCAAGCTTAATACCTAGGCACAGGTACTaGACCATGCCCAGGACAGCA +
Preference number: 4 (lower is better)
Translates to: YFDPATSFWFYCQCPSLIPRHRY*TMPRTA
Trigger: TGCTGTCCTGGGCATGGTGCAGTACCTGTGCCTAGG...TATTAAGCTTGGACATTGACAATAGAACCAGAAGCTTGTAGCTGGATCAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR GCA 90 bp GCTTGCCATGTCCACTCTTTGTTAAGCCAAGGCATCAGATTGGTTCTCTATAGTGCTTCGGCCCTGTTTTaGAACAAGGTAATAAACAGC +
Preference number: 4 (lower is better)
Translates to: ACHVHSLLSQGIRLVLYSASALF*NKVINS
Trigger: GCTGTTTATTACCTTGTTGCAAAACAGGGCCGAAGC...ACTATAGAGAACCAATCTGATGCCTTGGCTTAACAAAGAGTGGACATGGCAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CCA 90 bp GATCCAGCTACAAGCTTCTGGTTCTATTGTCAATGTCCAAGCTTAATAAGAAAACAGGCAGGCAGAGGGTaGAATAGCTACCATCCGACA +
Preference number: 4 (lower is better)
Translates to: DPATSFWFYCQCPSLIRKQAGRG*NSYHPT
Trigger: TGTCGGATGGTAGCTATTCCACCCTCTGCCTGCCTG...TTTTCTTATTAAGCTTGGACATTGACAATAGAACCAGAAGCTTGTAGCTGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CCA 90 bp AAAACACAATTTTTATGGTCCCGAATTTCTACCGATTGGGAAGACAAAGCAATTCACCAACTCCAGTGCTaGCGCCATGTACTGCGGGAT +
Preference number: 4 (lower is better)
Translates to: KTQFLWSRISTDWEDKAIHQLQC*RHVLRD
Trigger: ATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTG...AATTGCTTTGTCTTCCCAATCGGTAGAAATTCGGGACCATAAAAATTGTGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp AACACAAGACAAGAGAAAAATTATAAAGTGCCTCAACTAAACAACCAAGTGGGAGGGACCCTGCCCCATTaGAGTGCGTGTTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: NTRQEKNYKVPQLNNQVGGTLPH*SACSQS
Trigger: ACTTTGTGAACACGCACTTCAATGGGGCAGGGTCCC...TCCCACTTGGTTGTTTAGTTGAGGCACTTTATAATTTTTCTCTTGTCTTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR TCA 90 bp AACACAAGACAAGAGAAAAATTATAAAGTGCCTCAACTAAACAACCAAGTGGGAGGCAAAGGATGGGGTTaGGCTGCTAAGGACAGGACA +
Preference number: 4 (lower is better)
Translates to: NTRQEKNYKVPQLNNQVGGKGWG*AAKDRT
Trigger: TGTCCTGTCCTTAGCAGCTCAACCCCATCCTTTGCC...TCCCACTTGGTTGTTTAGTTGAGGCACTTTATAATTTTTCTCTTGTCTTGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp AAAACACAATTTTTATGGTCCCGAATTTCTACCGATTGGGAAGACAAAGCAATTTCACTTGGCAGGCTCTaGTGGTCCAAATCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: KTQFLWSRISTDWEDKAISLGRL*WSKSSE
Trigger: CTCCGAGGATTTGGACCAGCAGAGCCTGCCAAGTGA...AATTGCTTTGTCTTCCCAATCGGTAGAAATTCGGGACCATAAAAATTGTGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR GCA 90 bp GCTTGCCATGTCCACTCTTTGTTAAGCCAAGGCATCAGATTGGTTCTCTATAGTTTTCAAGTCAACACCTaGACAGATGTTAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ACHVHSLLSQGIRLVLYSFQVNT*TDVSVH
Trigger: GTGGACACTAACATCTGTGCAGGTGTTGACTTGAAA...ACTATAGAGAACCAATCTGATGCCTTGGCTTAACAAAGAGTGGACATGGCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR GCA 90 bp AAAACACAATTTTTATGGTCCCGAATTTCTACCGATTGGGAAGACAAAGCAATTTTCACTCTCTGTCTCTaGCAGTGGCTCATCACCTCC +
Preference number: 4 (lower is better)
Translates to: KTQFLWSRISTDWEDKAIFTLCL*QWLITS
Trigger: GGAGGTGATGAGCCACTGGCAGAGACAGAGAGTGAA...AATTGCTTTGTCTTCCCAATCGGTAGAAATTCGGGACCATAAAAATTGTGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CCA 90 bp CCGATTGGGAAGACAAAGCAATTTCCTCCTGCATATACTTTATTCACACATGCTGCCAAGGCATCAGATTaGTTCTCTATAGTTCCCACA +
Preference number: 4 (lower is better)
Translates to: PIGKTKQFPPAYTLFTHAAKASD*FSIVPT
Trigger: TGTGGGAACTATAGAGAACCAATCTGATGCCTTGGC...AGCATGTGTGAATAAAGTATATGCAGGAGGAAATTGCTTTGTCTTCCCAATCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430297.7
3UTR CAA 72 bp AACTCATTTCTAACACAGGTAAAGGTCCTCTATTGCTaGTTTGGCTTCCCCAGTAAAGATAAATCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: NSFLTQVKVLYC*FGFPSKDKSRL
Trigger: CAGCCTGGATTTATCTTTACTGGGGAAGCCAAACAAGCAATAGAGGACCTTTACCTGTGTTAGAAATGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CCA 90 bp AAAACACAATTTTTATGGTCCCGAATTTCTACCGATTGGGAAGACAAAGCAATTTGTGATGCAGGGCATTaGCTTCTGCCTTCATGCTGT +
Preference number: 4 (lower is better)
Translates to: KTQFLWSRISTDWEDKAICDAGH*LLPSCC
Trigger: ACAGCATGAAGGCAGAAGCCAATGCCCTGCATCACA...AATTGCTTTGTCTTCCCAATCGGTAGAAATTCGGGACCATAAAAATTGTGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR GCA 90 bp AAAACACAATTTTTATGGTCCCGAATTTCTACCGATTGGGAAGACAAAGCAATTAATGGCCAAGGCCAATaGTGTTTTCTTCACATCCAC +
Preference number: 4 (lower is better)
Translates to: KTQFLWSRISTDWEDKAINGQGQ*CFLHIH
Trigger: GTGGATGTGAAGAAAACAGCATTGGCCTTGGCCATT...AATTGCTTTGTCTTCCCAATCGGTAGAAATTCGGGACCATAAAAATTGTGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CCA 90 bp AAAACACAATTTTTATGGTCCCGAATTTCTACCGATTGGGAAGACAAAGCAATTCGAATTTCTACCGATTaGGAAGACAAAGCAATTTCC +
Preference number: 4 (lower is better)
Translates to: KTQFLWSRISTDWEDKAIRISTD*EDKAIS
Trigger: GGAAATTGCTTTGTCTTCCCAATCGGTAGAAATTCG...AATTGCTTTGTCTTCCCAATCGGTAGAAATTCGGGACCATAAAAATTGTGTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS CCA 90 bp GCCGCAGCCACAGCGTCGTGGCCAGGCGTCCCACCGCCTCGGCCGTaGCCGCCTCCTCCTCTGCCTCACTGGTGGCCTCACTCATGCCTA +
Preference number: 5 (lower is better)
Translates to: AAATASWPGVPPPRP*PPPPLPHWWPHSCL
Trigger: TAGGCATGAGTGAGGCCACCAGTGAGGCAGAGGAGGAGGCGGCCACGGCCGAGGCGGTGGGACGCCTGGCCACGACGCTGTGGCTGCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000430297.7
ENST00000452293.5
CDS GCA 90 bp CAGCTCTCAGCCAGGTATCTGCACAACTCGGGCACACTCAGCAGGTaGGGCCGGGCGCCTGACCCCGCACCCTCACTGTCAGAGTGTGGC +
Preference number: 5 (lower is better)
Translates to: QLSARYLHNSGTLSR*GRAPDPAPSLSECG
Trigger: GCCACACTCTGACAGTGAGGGTGCGGGGTCAGGCGCCCGGCCGCACCTGCTGAGTGTGCCCGAGTTGTGCAGATACCTGGCTGAGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430297.7
ENST00000430747.5
ENST00000443757.5
ENST00000452293.5
ENST00000458520.5
CDS GCA 90 bp CAGCTCTCAGCCAGGTATCTGCACAACTCGGGCACACTCAGCAGGTaGGGCCGGGCGCCTGACCCCGCACCCTCACTGGGGAGACATGAC +
Preference number: 5 (lower is better)
Translates to: QLSARYLHNSGTLSR*GRAPDPAPSLGRHD
Trigger: GTCATGTCTCCCCAGTGAGGGTGCGGGGTCAGGCGCCCGGCCGCACCTGCTGAGTGTGCCCGAGTTGTGCAGATACCTGGCTGAGAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465672.1
CDS CCA 90 bp CACCAGAAGCTGAGTGCCCGGATCCGAAGGAGGCTCTACTATGGCTaGGACTGGGAAGCCGACTGTAGCCTGGAGGAGCTCTCCAGCCCG +
Preference number: 5 (lower is better)
Translates to: HQKLSARIRRRLYYG*DWEADCSLEELSSP
Trigger: CGGGCTGGAGAGCTCCTCCAGGCTACAGTCGGCTTCCCAGTCCCAGCCATAGTAGAGCCTCCTTCGGATCCGGGCACTCAGCTTCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458520.5
CDS-3UTR CAA 90 bp GCAGGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCCAGTCAGCTGCGGAGTaGTGGCCCGGGATACGGAGA +
Preference number: 5 (lower is better)
Translates to: AGRGWNSYHPTASFPTHCQSAAE*WPGIRR
Trigger: TCTCCGTATCCCGGGCCACAACTCCGCAGCTGACTG...GCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CAA 90 bp CTTGGCCAGTGCCCACGGGATAGGAGGAGCTGGCAAAGGATGGGGTTGAGCTGCGGGGTCCCACTACACTaGGATCACCCAGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: LGQCPRDRRSWQRMGLSCGVPLH*DHPEEQ
Trigger: CTGCTCCTCTGGGTGATCCAAGTGTAGTGGGACCCC...GCAGCTCAACCCCATCCTTTGCCAGCTCCTCCTATCCCGTGGGCACTGGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CAA 90 bp GCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCCCCAAGTCCAGGGCTTGCCTaGACAGAGCTTGAGGACGGC +
Preference number: 5 (lower is better)
Translates to: AEGGIATIRQPASPHTAPSPGLA*TELEDG
Trigger: GCCGTCCTCAAGCTCTGTCAAGGCAAGCCCTGGACT...TGGGGCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CAA 90 bp CTTGGCCAGTGCCCACGGGATAGGAGGAGCTGGCAAAGGATGGGGTTGAGCTGCGGGGACCCTGCCCCATaGAAGTGCGTGTTCACAAAG +
Preference number: 5 (lower is better)
Translates to: LGQCPRDRRSWQRMGLSCGDPAP*KCVFTK
Trigger: CTTTGTGAACACGCACTTCAATGGGGCAGGGTCCCC...GCAGCTCAACCCCATCCTTTGCCAGCTCCTCCTATCCCGTGGGCACTGGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CAA 90 bp AGCAACTCAAAGTCCTCAGTGGTGAGTGCCTCTTCTTCCTCAGGGGCAGGCAGGGAGCATCAGGGGGTTTaGGCGGTGTCTCTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: SNSKSSVVSASSSSGAGREHQGV*AVSLAP
Trigger: TGGAGCCAGAGACACCGCCAAAACCCCCTGATGCTC...CCTGCCTGCCCCTGAGGAAGAAGAGGCACTCACCACTGAGGACTTTGAGTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273048.2
CDS GCA 90 bp CCCCTTACTCCTCTTGTCGTGTTTGTGATGCAGGGCATTGGCTTCTaGCTTCATGCTGTAGTCCAGCTGCATGAGCAGGGGCTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: PLTPLVVFVMQGIGF*LHAVVQLHEQGLQA
Trigger: CGCCTGGAGCCCCTGCTCATGCAGCTGGACTACAGCATGAAGGCAGAAGCCAATGCCCTGCATCACAAACACGACAAGAGGAGTAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481925.1
CDS-3UTR CAA 90 bp GGAGGAAACAGCAACACTCCTAGCCAGGAAGCCCTACTGTGCCTGCAGCTCCTTGCTGGATTCTGCCTCTaGTACTGCAGCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GGNSNTPSQEALLCLQLLAGFCL*YCSSSC
Trigger: GCAGGAGCTGCTGCAGTACAAGAGGCAGAATCCAGC...AAGGAGCTGCAGGCACAGTAGGGCTTCCTGGCTAGGAGTGTTGCTGTTTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR CAA 90 bp ACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTGAGGATAGGAGGAGGGGACCCTGCCCCATaGAAGTGCGTGTTCACAAAG +
Preference number: 5 (lower is better)
Translates to: TTKWDMRAEQHRSLRIGGGDPAP*KCVFTK
Trigger: CTTTGTGAACACGCACTTCAATGGGGCAGGGTCCCC...TCCTCCTATCCTCAGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CAA 90 bp CAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATCCAGACCACCAGGGCTaGGGGCATAGTGGAATGAGA +
Preference number: 5 (lower is better)
Translates to: QERAHAHQLQCWRHVLRDPDHQG*GHSGMR
Trigger: TCTCATTCCACTATGCCCCAAGCCCTGGTGGTCTGG...ATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CAA 90 bp GCAGGGAGGCAAGCGCAGGCTGTGGGAAGGACTTCCCTAGCCCTGTTCACATCCTCCAGGCTGAGTGAGTaGTTAGCATGTAGATGGGTG +
Preference number: 5 (lower is better)
Translates to: AGRQAQAVGRTSLALFTSSRLSE*LACRWV
Trigger: CACCCATCTACATGCTAACAACTCACTCAGCCTGGA...GGATGTGAACAGGGCTAGGGAAGTCCTTCCCACAGCCTGCGCTTGCCTCCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS CCA 90 bp GCCCTGCTCCATGGTGACACTGGCACCAGCAAGCAGGACAGGATGTaGGCATTTGTCTTCAAGAGGTGGCCTGTACTCACCTGTCAGAGT +
Preference number: 5 (lower is better)
Translates to: ALLHGDTGTSKQDRM*AFVFKRWPVLTCQS
Trigger: ACTCTGACAGGTGAGTACAGGCCACCTCTTGAAGACAAATGCCCACATCCTGTCCTGCTTGCTGGTGCCAGTGTCACCATGGAGCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465672.1
CDS-3UTR CAA 90 bp CAACACAGCACAGCCAGAGCAGACTCGAACGCAGAACTGAGCTGGATTCTGCCTGCTGGATTCTGCCTCTaGTACTGCAGCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: QHSTARADSNAELSWILPAGFCL*YCSSSC
Trigger: GCAGGAGCTGCTGCAGTACAAGAGGCAGAATCCAGC...AGGCAGAATCCAGCTCAGTTCTGCGTTCGAGTCTGCTCTGGCTGTGCTGTGTTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452293.5
CDS-3UTR CAA 90 bp GTGCCTCAACTAAACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTCCAGACCACCAGGGCTaGGGGCATAGTGGAATGAGA +
Preference number: 5 (lower is better)
Translates to: VPQLNNQVGHEGRAAQVPPDHQG*GHSGMR
Trigger: TCTCATTCCACTATGCCCCAAGCCCTGGTGGTCTGG...AGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGTTTAGTTGAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS TCA 90 bp GAGGCTGCCAGAGATCCAGCAGAAAATAGGCCAAAAGTGAGACGCTaGGTAGGAAGAAGGGCCGGAGGGACGAGGAAGACAGCAACCAGA +
Preference number: 5 (lower is better)
Translates to: EAARDPAENRPKVRR*VGRRAGGTRKTATR
Trigger: TCTGGTTGCTGTCTTCCTCGTCCCTCCGGCCCTTCTTCCTACTCAGCGTCTCACTTTTGGCCTATTTTCTGCTGGATCTCTGGCAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS TCA 90 bp GAGGCTGCCAGAGATCCAGCAGAAAATAGGCCAAAAGTGAGACGCTaGGTAGGAAGAAGGGCCGGAGGGACGAGGAAGACAGCAACACAG +
Preference number: 5 (lower is better)
Translates to: EAARDPAENRPKVRR*VGRRAGGTRKTATQ
Trigger: CTGTGTTGCTGTCTTCCTCGTCCCTCCGGCCCTTCTTCCTACTCAGCGTCTCACTTTTGGCCTATTTTCTGCTGGATCTCTGGCAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443757.5
CDS-3UTR CAA 90 bp AAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTGAGGATAGGAGGAAAAAGAGCTGGATTCTGCCTCTaGTACTGCAGCAGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: KWDMRAEQHRSLRIGGKRAGFCL*YCSSSC
Trigger: GCAGGAGCTGCTGCAGTACAAGAGGCAGAATCCAGC...TCTTTTTCCTCCTATCCTCAGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000273048.2
ENST00000430297.7
CDS-3UTR CAA 90 bp AGTTCCCACATCCTTGTGCATCTTCCTACCTGTGCCCTATTAATGGACAGGGGCAGTCCAGGGCTTGCCTaGACAGAGCTTGAGGACGGC +
Preference number: 5 (lower is better)
Translates to: SSHILVHLPTCALLMDRGSPGLA*TELEDG
Trigger: GCCGTCCTCAAGCTCTGTCAAGGCAAGCCCTGGACT...GCCCCTGTCCATTAATAGGGCACAGGTAGGAAGATGCACAAGGATGTGGGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CAA 90 bp GGATCACCCAGAGGAGCAGTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCGGGGTCCCACTACACTaGGATCACCCAGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: GSPRGAVRKLLISRESTCGVPLH*DHPEEQ
Trigger: CTGCTCCTCTGGGTGATCCAAGTGTAGTGGGACCCC...GCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTACTGCTCCTCTGGGTGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS TCA 90 bp GAGGCTGCCAGAGATCCAGCAGAAAATAGGCCAAAAGTGAGACGCTaGGTAGGAAGAAGGGCCGGAGGGACGAGGAAGACAGCAACCTTT +
Preference number: 5 (lower is better)
Translates to: EAARDPAENRPKVRR*VGRRAGGTRKTATF
Trigger: AAAGGTTGCTGTCTTCCTCGTCCCTCCGGCCCTTCTTCCTACTCAGCGTCTCACTTTTGGCCTATTTTCTGCTGGATCTCTGGCAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458520.5
CDS-3UTR CAA 90 bp GGAAGGCAGCTCACAGTCAGGGAGGCAGCAGTTCTAGCCAATCAACACTTTATTAGTCCAGGGCTTGCCTaGACAGAGCTTGAGGACGGC +
Preference number: 5 (lower is better)
Translates to: GRQLTVREAAVLANQHFISPGLA*TELEDG
Trigger: GCCGTCCTCAAGCTCTGTCAAGGCAAGCCCTGGACT...AATAAAGTGTTGATTGGCTAGAACTGCTGCCTCCCTGACTGTGAGCTGCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CAA 90 bp GGCAGAGGGTGGAATAGCTACCATCCGACAGCCAGCTTCCCCACACACTGCCCCCCGAATTTCTACCGATaGGGAAGACAAAGCAATTTC +
Preference number: 5 (lower is better)
Translates to: GRGWNSYHPTASFPTHCPPNFYR*GRQSNF
Trigger: GAAATTGCTTTGTCTTCCCAATCGGTAGAAATTCGG...GGGGCAGTGTGTGGGGAAGCTGGCTGTCGGATGGTAGCTATTCCACCCTCTGCC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS CCA 90 bp GGCACGCAAACACCTACACAGGAGCCTAGGACCATGAAAAACCCATaGCTTGTTACCAGTTCATTCACAATGCTGGGGCACTGCCCTGCT +
Preference number: 5 (lower is better)
Translates to: GTQTPTQEPRTMKNP*LVTSSFTMLGHCPA
Trigger: AGCAGGGCAGTGCCCCAGCATTGTGAATGAACTGGTAACAAGCCATGGGTTTTTCATGGTCCTAGGCTCCTGTGTAGGTGTTTGCGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465672.1
CDS-3UTR CAA 90 bp GGAAGGCAGCTCACAGTCAGGGAGGCAGCAGTTCTAGCCAATCAACACTTTATTTCTCCTCTGGTTCACTaGGCAGGCTCTGCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: GRQLTVREAAVLANQHFISPLVH*AGSAGP
Trigger: TGGACCAGCAGAGCCTGCCAAGTGAACCAGAGGAGA...AATAAAGTGTTGATTGGCTAGAACTGCTGCCTCCCTGACTGTGAGCTGCCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CAA 90 bp GTAAGGAAGCTCCTAATCTCAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGTCTCCTCTGGTTCACTaGGCAGGCTCTGCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: VRKLLISRESTCSPTPVLSPLVH*AGSAGP
Trigger: TGGACCAGCAGAGCCTGCCAAGTGAACCAGAGGAGA...CAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTGAGATTAGGAGCTTCCTTAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CAA 90 bp TATAAAGTGCCTCAACTAAACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGGAGCATCAGGGGGTTTaGGCGGTGTCTCTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: YKVPQLNNQVGHEGRAAQEHQGV*AVSLAP
Trigger: TGGAGCCAGAGACACCGCCAAAACCCCCTGATGCTC...CTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGTTTAGTTGAGGCACTTTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CAA 90 bp CTGACCCTAGTAGGGGGTCCCACTACACTTGGATCACCCAGAGGAGCAGTAAGGTGCTTCGGCCCTGTTTaGCAACAAGGTAATAAACAG +
Preference number: 5 (lower is better)
Translates to: LTLVGGPTTLGSPRGAVRCFGPV*QQGNKQ
Trigger: CTGTTTATTACCTTGTTGCAAAACAGGGCCGAAGCA...CCTTACTGCTCCTCTGGGTGATCCAAGTGTAGTGGGACCCCCTACTAGGGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CAA 90 bp GCCCCAGGTTTACTCTTTACTTCCCAGACCAGGAGCCTCCCTAAAGCTTGGCCAAGCCAAGGCATCAGATaGGTTCTCTATAGTTCCCAC +
Preference number: 5 (lower is better)
Translates to: APGLLFTSQTRSLPKAWPSQGIR*VLYSSH
Trigger: GTGGGAACTATAGAGAACCAATCTGATGCCTTGGCT...TGGCCAAGCTTTAGGGAGGCTCCTGGTCTGGGAAGTAAAGAGTAAACCTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CAA 90 bp GTGCCTCAACTAAACAACCAAGTGGGACATGAGGGCAGAGCAGCACAGGTCCCTTGCCATGTCCACTCTTaGTTAAGCCAAGGCATCAGA +
Preference number: 5 (lower is better)
Translates to: VPQLNNQVGHEGRAAQVPCHVHS*LSQGIR
Trigger: TCTGATGCCTTGGCTTAACAAAGAGTGGACATGGCA...AGGGACCTGTGCTGCTCTGCCCTCATGTCCCACTTGGTTGTTTAGTTGAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CAA 90 bp CAAGAGAGAGCACATGCTCACCAACTCCAGTGCTGGCGCCATGTACTGCGGGATTCCTCTATTGCTTGTTaGGCTTCCCCAGTAAAGATA +
Preference number: 5 (lower is better)
Translates to: QERAHAHQLQCWRHVLRDSSIAC*ASPVKI
Trigger: TATCTTTACTGGGGAAGCCAAACAAGCAATAGAGGA...ATCCCGCAGTACATGGCGCCAGCACTGGAGTTGGTGAGCATGTGCTCTCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CAA 90 bp GGGCTGTCTGATGCATTTGCTGAAGCCAAAACTTCTTGGGTTTGGGTTCTGGCTCCCAAAGAGGAAGGCTaGCCATGTCCACTCTTTGTT +
Preference number: 5 (lower is better)
Translates to: GLSDAFAEAKTSWVWVLAPKEEG*PCPLFV
Trigger: AACAAAGAGTGGACATGGCAAGCCTTCCTCTTTGGG...AGCCAGAACCCAAACCCAAGAAGTTTTGGCTTCAGCAAATGCATCAGACAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CAA 90 bp TCACACATGCTAAATCTCACTAAACAGATCACACTGTCAAGGAAGATGGCTAAGGAGCATCAGGGGGTTTaGGCGGTGTCTCTGGCTCCA +
Preference number: 5 (lower is better)
Translates to: SHMLNLTKQITLSRKMAKEHQGV*AVSLAP
Trigger: TGGAGCCAGAGACACCGCCAAAACCCCCTGATGCTC...CTTAGCCATCTTCCTTGACAGTGTGATCTGTTTAGTGAGATTTAGCATGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CAA 90 bp AAGAAAGGGCCAGACCACCAGGGCTTGGGGCATAGTGGAATGAGAATAGAGATGAAGGTCCTCTATTGCTaGTTTGGCTTCCCCAGTAAA +
Preference number: 5 (lower is better)
Translates to: KKGPDHQGLGHSGMRIEMKVLYC*FGFPSK
Trigger: TTTACTGGGGAAGCCAAACAAGCAATAGAGGACCTT...CATCTCTATTCTCATTCCACTATGCCCCAAGCCCTGGTGGTCTGGCCCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CAA 90 bp CACATCCTTGTGCATCTTCCTACCTGTGCCCTATTAATGGACAGGGGCTGTCTGGGCTGTCTGATGCATTaGCTGAAGCCAAAACTTCTT +
Preference number: 5 (lower is better)
Translates to: HILVHLPTCALLMDRGCLGCLMH*LKPKLL
Trigger: AAGAAGTTTTGGCTTCAGCAAATGCATCAGACAGCC...CAGACAGCCCCTGTCCATTAATAGGGCACAGGTAGGAAGATGCACAAGGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CAA 90 bp AACACAAGACAAGAGAAAAATTATAAAGTGCCTCAACTAAACAACCAAGTGGGACAGTCAGCTGCGGAGTaGTGGCCCGGGATACGGAGA +
Preference number: 5 (lower is better)
Translates to: NTRQEKNYKVPQLNNQVGQSAAE*WPGIRR
Trigger: TCTCCGTATCCCGGGCCACAACTCCGCAGCTGACTG...TCCCACTTGGTTGTTTAGTTGAGGCACTTTATAATTTTTCTCTTGTCTTGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CAA 90 bp TATTTTGATCCAGCTACAAGCTTCTGGTTCTATTGTCAATGTCCAAGCTTAATAGGGGTCCCACTACACTaGGATCACCCAGAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: YFDPATSFWFYCQCPSLIGVPLH*DHPEEQ
Trigger: CTGCTCCTCTGGGTGATCCAAGTGTAGTGGGACCCC...TATTAAGCTTGGACATTGACAATAGAACCAGAAGCTTGTAGCTGGATCAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CAA 90 bp AACACAAGACAAGAGAAAAATTATAAAGTGCCTCAACTAAACAACCAAGTGGGATCTCCTCTGGTTCACTaGGCAGGCTCTGCTGGTCCA +
Preference number: 5 (lower is better)
Translates to: NTRQEKNYKVPQLNNQVGSPLVH*AGSAGP
Trigger: TGGACCAGCAGAGCCTGCCAAGTGAACCAGAGGAGA...TCCCACTTGGTTGTTTAGTTGAGGCACTTTATAATTTTTCTCTTGTCTTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CAA 90 bp TCACACATGCTAAATCTCACTAAACAGATCACACTGTCAAGGAAGATGGCTAAGCCGAATTTCTACCGATaGGGAAGACAAAGCAATTTC +
Preference number: 5 (lower is better)
Translates to: SHMLNLTKQITLSRKMAKPNFYR*GRQSNF
Trigger: GAAATTGCTTTGTCTTCCCAATCGGTAGAAATTCGG...CTTAGCCATCTTCCTTGACAGTGTGATCTGTTTAGTGAGATTTAGCATGTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CAA 90 bp AACACAAGACAAGAGAAAAATTATAAAGTGCCTCAACTAAACAACCAAGTGGGAGGTAAAGGTCCTCTATaGCTTGTTTGGCTTCCCCAG +
Preference number: 5 (lower is better)
Translates to: NTRQEKNYKVPQLNNQVGGKGPL*LVWLPQ
Trigger: CTGGGGAAGCCAAACAAGCAATAGAGGACCTTTACC...TCCCACTTGGTTGTTTAGTTGAGGCACTTTATAATTTTTCTCTTGTCTTGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CAA 90 bp AAAACACAATTTTTATGGTCCCGAATTTCTACCGATTGGGAAGACAAAGCAATTATAGTTCCCACATCCTaGTGCATCTTCCTACCTGTG +
Preference number: 5 (lower is better)
Translates to: KTQFLWSRISTDWEDKAIIVPTS*CIFLPV
Trigger: CACAGGTAGGAAGATGCACAAGGATGTGGGAACTAT...AATTGCTTTGTCTTCCCAATCGGTAGAAATTCGGGACCATAAAAATTGTGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS-3UTR CAA 90 bp AAAACACAATTTTTATGGTCCCGAATTTCTACCGATTGGGAAGACAAAGCAATTTGCTTCGGCCCTGTTTaGCAACAAGGTAATAAACAG +
Preference number: 5 (lower is better)
Translates to: KTQFLWSRISTDWEDKAICFGPV*QQGNKQ
Trigger: CTGTTTATTACCTTGTTGCAAAACAGGGCCGAAGCA...AATTGCTTTGTCTTCCCAATCGGTAGAAATTCGGGACCATAAAAATTGTGTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000420189.1
ENST00000430297.7
CDS-3UTR CAA 90 bp AACACAAGACAAGAGAAAAATTATAAAGTGCCTCAACTAAACAACCAAGTGGGACCTATGGAGAATATTTaGATCCAGCTACAAGCTTCT +
Preference number: 5 (lower is better)
Translates to: NTRQEKNYKVPQLNNQVGPMENI*IQLQAS
Trigger: AGAAGCTTGTAGCTGGATCAAAATATTCTCCATAGG...TCCCACTTGGTTGTTTAGTTGAGGCACTTTATAATTTTTCTCTTGTCTTGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430297.7
CDS GCA 72 bp AGGCTGTGCAGCGGCTTCTCCCACACCAGCAACCGCTaGGCCGCCGCCAGCACCGCCTCCCAGCCGCGGAGC +
Preference number: 6 (lower is better)
Translates to: RLCSGFSHTSNR*AAASTASQPRS
Trigger: GCTCCGCGGCTGGGAGGCGGTGCTGGCGGCGGCGCAGCGGTTGCTGGTGTGGGAGAAGCCGCTGCACAGCCT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000273048.2
ENST00000430297.7
ENST00000452293.5
CDS GCA 72 bp GCCAGGTATCTGCACAACTCGGGCACACTCAGCAGGTaGGGCCGGGCGCCTGACCCCGCACCCTCACTGGGG +
Preference number: 6 (lower is better)
Translates to: ARYLHNSGTLSR*GRAPDPAPSLG
Trigger: CCCCAGTGAGGGTGCGGGGTCAGGCGCCCGGCCGCACCTGCTGAGTGTGCCCGAGTTGTGCAGATACCTGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465672.1
CDS GCA 72 bp GCCAGGTATCTGCACAACTCGGGCACACTCAGCAGGTaGGGCCGGGCGCCTGACCCCGCACCCTCACTGTCA +
Preference number: 6 (lower is better)
Translates to: ARYLHNSGTLSR*GRAPDPAPSLS
Trigger: TGACAGTGAGGGTGCGGGGTCAGGCGCCCGGCCGCACCTGCTGAGTGTGCCCGAGTTGTGCAGATACCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000430297.7
ENST00000430747.5
ENST00000443757.5
ENST00000452293.5
ENST00000458520.5
CDS CCA 72 bp GCCCGGATCCGAAGGAGGCTCTACTATGGCTGGGACTaGGAAGCCGACTGTAGCCTGGAGGAGCTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: ARIRRRLYYGWD*EADCSLEELSS
Trigger: GCTGGAGAGCTCCTCCAGGCTACAGTCGGCTTCCCAGTCCCAGCCATAGTAGAGCCTCCTTCGGATCCGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458520.5
CDS CCA 72 bp CTGAGTGCCCGGATCCGAAGGAGGCTCTACTATGGCTaGGACTGGGAAGCCGACTGTAGCCTGGAGGAGCTC +
Preference number: 6 (lower is better)
Translates to: LSARIRRRLYYG*DWEADCSLEEL
Trigger: GAGCTCCTCCAGGCTACAGTCGGCTTCCCAGTCCCAGCCATAGTAGAGCCTCCTTCGGATCCGGGCACTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458520.5
CDS CCA 72 bp ACCCCAAGCCAAGGCCCTCCCGCTCTTTCACCCTCCTaGCTTAGGGCAGCCCCTTACTCCTCTTGTCGTGTT +
Preference number: 6 (lower is better)
Translates to: TPSQGPPALSPS*LRAAPYSSCRV
Trigger: AACACGACAAGAGGAGTAAGGGGCTGCCCTAAGCCAGGAGGGTGAAAGAGCGGGAGGGCCTTGGCTTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481925.1
CDS CCA 72 bp GAGGGACGAGGAAGACAGCAACACAGGTTCGTTTTCTaGTTGACGAAGTACCCCGGGTTCCGAGTCCGGGTC +
Preference number: 6 (lower is better)
Translates to: EGRGRQQHRFVF*LTKYPGFRVRV
Trigger: GACCCGGACTCGGAACCCGGGGTACTTCGTCAACCAGAAAACGAACCTGTGTTGCTGTCTTCCTCGTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000443757.5
CDS TCA 72 bp TCATGCATCCATCTCAGAAGGTGGAAAGGCGCCTACTaGTGGGGTAATGGCACCTCCAGGCCTAACTCGCGA +
Preference number: 6 (lower is better)
Translates to: SCIHLRRWKGAY*WGNGTSRPNSR
Trigger: TCGCGAGTTAGGCCTGGAGGTGCCATTACCCCATCAGTAGGCGCCTTTCCACCTTCTGAGATGGATGCATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430747.5
ENST00000452022.1
CDS CCA 72 bp AAGCAGGACAGGATGTGGGCATTTGTCTTCAAGAGGTaGCCTGTACTCACCTGTCAGAGTGTGGCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: KQDRMWAFVFKR*PVLTCQSVAPL
Trigger: CAGAGGAGCCACACTCTGACAGGTGAGTACAGGCCACCTCTTGAAGACAAATGCCCACATCCTGTCCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465672.1
CDS TCA 72 bp AGAGATCCAGCAGAAAATAGGCCAAAAGTGAGACGCTaGGTAGGAAGAAGGGCCGGAGGGACGAGGAAGACA +
Preference number: 6 (lower is better)
Translates to: RDPAENRPKVRR*VGRRAGGTRKT
Trigger: TGTCTTCCTCGTCCCTCCGGCCCTTCTTCCTACTCAGCGTCTCACTTTTGGCCTATTTTCTGCTGGATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000273048.2
ENST00000430297.7
ENST00000430747.5
ENST00000443757.5
ENST00000452022.1
ENST00000458520.5
CDS CCA 72 bp ACACCTACACAGGAGCCTAGGACCATGAAAAACCCATaGCTTGTTACCAGTTCATTCACAATGCTGGGGCAC +
Preference number: 6 (lower is better)
Translates to: TPTQEPRTMKNP*LVTSSFTMLGH
Trigger: GTGCCCCAGCATTGTGAATGAACTGGTAACAAGCCATGGGTTTTTCATGGTCCTAGGCTCCTGTGTAGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465672.1
CDS TCA 72 bp CAGGCACGCAAACACCTACACAGGAGCCTAGGACCATaGAAAACCCATGGCTTGTTACCAGTTCATTCACAA +
Preference number: 6 (lower is better)
Translates to: QARKHLHRSLGP*KTHGLLPVHSQ
Trigger: TTGTGAATGAACTGGTAACAAGCCATGGGTTTTTCATGGTCCTAGGCTCCTGTGTAGGTGTTTGCGTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465672.1
CDS TCA 72 bp AAAAGCAAGAGTAGTAGAGCAATGACCAAGCATGAATaGTGGGAGGGGAGACAAACACAGCTAAAGAACTGG +
Preference number: 6 (lower is better)
Translates to: KSKSSRAMTKHE*WEGRQTQLKNW
Trigger: CCAGTTCTTTAGCTGTGTTTGTCTCCCCTCCCATCATTCATGCTTGGTCATTGCTCTACTACTCTTGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481925.1