RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RETREG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000154153

Ensembl transcript IDs: ENST00000306320.10, ENST00000399793.6, ENST00000506441.1, ENST00000509048.2, ENST00000509977.2, ENST00000510362.5, ENST00000510362.6, ENST00000682033.1, ENST00000682142.1, ENST00000682229.1, ENST00000682564.1, ENST00000682628.1, ENST00000682808.1, ENST00000682828.1, ENST00000682982.1, ENST00000683045.1, ENST00000683130.1, ENST00000683169.1, ENST00000683414.1, ENST00000683527.1, ENST00000683539.1, ENST00000683973.1, ENST00000684456.1, ENST00000684521.1, ENST00000684695.1

Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGGTCTCAGATGTCTCTATGCATCTGCCAAAATGCCAGCTGTACCTaGAGATTTAAGAGATTTTTGGTAGTTGCTGGCATGGTCCCTCGA +
Preference number: 1 (lower is better)
Translates to: GSQMSLCICQNASCT*RFKRFLVVAGMVPR
Trigger: TCGAGGGACCATGCCAGCAACTACCAAAAATCTCTTAAATCTTCAGGTACAGCTGGCATTTTGGCAGATGCATAGAGACATCTGAGACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
3UTR GCA 90 bp TTAATACCACCCACTGCAAGACTAGAGATGGCAGTCAATGGAGCATaGTTCTTTACAAATAAGCCTAAGTCTACAACTGCAGAAATAACA +
Preference number: 1 (lower is better)
Translates to: LIPPTARLEMAVNGA*FFTNKPKSTTAEIT
Trigger: TGTTATTTCTGCAGTTGTAGACTTAGGCTTATTTGTAAAGAAGCATGCTCCATTGACTGCCATCTCTAGTCTTGCAGTGGGTGGTATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
3UTR TCA 90 bp GGCACAGGCTCACTTTGTATCAATAAAGGACATCAAACACAGTCATaGGGCACTAATGACATAAGCAATCACAAAAAGCAAGTGTTCAAA +
Preference number: 1 (lower is better)
Translates to: GTGSLCINKGHQTQS*GTNDISNHKKQVFK
Trigger: TTTGAACACTTGCTTTTTGTGATTGCTTATGTCATTAGTGCCTCATGACTGTGTTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000510362.5
3UTR-3UTR GCA 90 bp AGATTTAAGAGATTTTTGGTAGTTGCTGGCATGGTCCCTCGACACTTAAAGTTTGGCAGAATAGAGCTGTaGTCCCAACATCCCTATCAC +
Preference number: 2 (lower is better)
Translates to: RFKRFLVVAGMVPRHLKFGRIEL*SQHPYH
Trigger: GTGATAGGGATGTTGGGAGCACAGCTCTATTCTGCC...AAACTTTAAGTGTCGAGGGACCATGCCAGCAACTACCAAAAATCTCTTAAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
3UTR-3UTR CCA 90 bp AACTTAAGTCTGAGCAGGCAGAATAGAGCTGTGCTCCCAACATCCCTATCACAAAGAGATGGCAGTCAATaGAGCATGCTTCTTTACAAA +
Preference number: 2 (lower is better)
Translates to: NLSLSRQNRAVLPTSLSQRDGSQ*SMLLYK
Trigger: TTTGTAAAGAAGCATGCTCCATTGACTGCCATCTCT...TTGTGATAGGGATGTTGGGAGCACAGCTCTATTCTGCCTGCTCAGACTTAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
3UTR-3UTR GCA 90 bp AATTCAGGTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTAATACCACCCACTaGAAGACTAGAGATGGCAGT +
Preference number: 2 (lower is better)
Translates to: NSGIFLQNPHSSEIFKHQVNTTH*KTRDGS
Trigger: ACTGCCATCTCTAGTCTTGCAGTGGGTGGTATTAAC...CTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATACCTGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
3UTR-3UTR GCA 90 bp AATTCAGGTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGTCTCAGATGTCTCTATaGATCTGCCAAAATGCCAGC +
Preference number: 2 (lower is better)
Translates to: NSGIFLQNPHSSEIFKHQSQMSL*ICQNAS
Trigger: GCTGGCATTTTGGCAGATGCATAGAGACATCTGAGA...CTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATACCTGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
3UTR-3UTR TCA 90 bp CAGGTTTCCATTTGTATTAAAATGGGCAAGATAATGAAGGCACAGGCTCACTTTCATCAAACACAGTCATaGGGCACTAATGACATAAGC +
Preference number: 2 (lower is better)
Translates to: QVSICIKMGKIMKAQAHFHQTQS*GTNDIS
Trigger: GCTTATGTCATTAGTGCCTCATGACTGTGTTTGATG...AAAGTGAGCCTGTGCCTTCATTATCTTGCCCATTTTAATACAAATGGAAACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000510362.5
3UTR-3UTR GCA 90 bp AATTCAGGTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGCAGTCAATGGAGCATaGTTCTTTACAAATAAGCCT +
Preference number: 2 (lower is better)
Translates to: NSGIFLQNPHSSEIFKHQAVNGA*FFTNKP
Trigger: AGGCTTATTTGTAAAGAAGCATGCTCCATTGACTGC...CTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATACCTGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
3UTR-3UTR TCA 90 bp GATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAACACAGTCAAATGCCAGCTGTACCTaGAGATTTAAGAGATTTTTG +
Preference number: 2 (lower is better)
Translates to: DNEGTGSLCINKGHQTQSNASCT*RFKRFL
Trigger: CAAAAATCTCTTAAATCTTCAGGTACAGCTGGCATT...TGACTGTGTTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
3UTR-3UTR TCA 90 bp AATGGGCAAGATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAAATGCCAGCTGTACCTaGAGATTTAAGAGATTTTTG +
Preference number: 2 (lower is better)
Translates to: NGQDNEGTGSLCINKGHQNASCT*RFKRFL
Trigger: CAAAAATCTCTTAAATCTTCAGGTACAGCTGGCATT...TTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATCTTGCCCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
3UTR-3UTR CCA 90 bp CAGGTTTCCATTTGTATTAAAATGGGCAAGATAATGAAGGCACAGGCTCACTTTTCTCCCTTTAACATTTaGCAAAACTCAGTCCAGATA +
Preference number: 2 (lower is better)
Translates to: QVSICIKMGKIMKAQAHFSPFNI*QNSVQI
Trigger: TATCTGGACTGAGTTTTGCCAAATGTTAAAGGGAGA...AAAGTGAGCCTGTGCCTTCATTATCTTGCCCATTTTAATACAAATGGAAACCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000510362.5
3UTR GCA 72 bp ACAACTGCTTGCTTTCTATGGGTTAATACCACCCACTaGAAGACTAGAGATGGCAGTCAATGGAGCATGCTT +
Preference number: 3 (lower is better)
Translates to: TTACFLWVNTTH*KTRDGSQWSML
Trigger: AAGCATGCTCCATTGACTGCCATCTCTAGTCTTGCAGTGGGTGGTATTAACCCATAGAAAGCAAGCAGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
3UTR GCA 72 bp CCCACTGCAAGACTAGAGATGGCAGTCAATGGAGCATaGTTCTTTACAAATAAGCCTAAGTCTACAACTGCA +
Preference number: 3 (lower is better)
Translates to: PTARLEMAVNGA*FFTNKPKSTTA
Trigger: TGCAGTTGTAGACTTAGGCTTATTTGTAAAGAAGCATGCTCCATTGACTGCCATCTCTAGTCTTGCAGTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
3UTR-3UTR CAA 90 bp GATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAACACAGTCAAGATTTAAGAGATTTTaGGTAGTTGCTGGCATGGTC +
Preference number: 3 (lower is better)
Translates to: DNEGTGSLCINKGHQTQSRFKRF*VVAGMV
Trigger: GACCATGCCAGCAACTACCAAAAATCTCTTAAATCT...TGACTGTGTTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp GTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCACATCCCTCCTCGGCGTaGTCCGGAGGCGCCGGGCTC +
Preference number: 4 (lower is better)
Translates to: VYSSKTHTVQRFSNTRFPHPSSA*SGGAGL
Trigger: GAGCCCGGCGCCTCCGGAGCACGCCGAGGAGGGATG...TGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306320.10
CDS-3UTR GCA 90 bp AATGGGCAAGATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAGCTTCCTCCTCCTGCTaGTGCCGCTCTGCGGGGGAT +
Preference number: 4 (lower is better)
Translates to: NGQDNEGTGSLCINKGHQASSSC*CRSAGD
Trigger: ATCCCCCGCAGAGCGGCAGCAGCAGGAGGAGGAAGC...TTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATCTTGCCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306320.10
CDS-3UTR GCA 90 bp CACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATTAAAATGGGCATGCGCTTCCTCCTCCTaGTGCTGCCGCTCTGCGGGG +
Preference number: 4 (lower is better)
Translates to: HTVQRFSNTRFPFVLKWACASSS*CCRSAG
Trigger: CCCCGCAGAGCGGCAGCAGCAGGAGGAGGAAGCGCA...TGCCCATTTTAATACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306320.10
CDS-3UTR CCA 90 bp GCTTTCTATGGGTTAATACCACCCACTGCAAGACTAGAGATGGCAGTCAATGGATGTCCTCTTCTGGGATaGGGGCAGCCTGAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: AFYGLIPPTARLEMAVNGCPLLG*GQPEKV
Trigger: CACTTTCTCAGGCTGCCCCCATCCCAGAAGAGGACA...TCCATTGACTGCCATCTCTAGTCTTGCAGTGGGTGGTATTAACCCATAGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp CAGGTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTGGGATGGGGGCAGCCTaGGAAAGTGCTTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: QVYSSKTHTVQRFSNTRFGMGAA*ESACCT
Trigger: TGTGCAGCAAGCACTTTCTCAGGCTGCCCCCATCCC...AAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp ATATCAATCTATCAGTGTCAGCTGATATATATCCAATTAATTCACTGCAGGAGGTCCTCCTCCTGCTGCTaGCGCTCTGCGGGGGATGCC +
Preference number: 4 (lower is better)
Translates to: ISIYQCQLIYIQLIHCRRSSSCC*RSAGDA
Trigger: GGCATCCCCCGCAGAGCGGCAGCAGCAGGAGGAGGA...CCTCCTGCAGTGAATTAATTGGATATATATCAGCTGACACTGATAGATTGATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306320.10
CDS-3UTR TCA 90 bp CCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATGGTGAGACCAGCTGCTaGTTGCGTCTCTTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: PPKPTQFRDFQTPGFHLYGETSC*LRLFAW
Trigger: CCAAGCAAAGAGACGCAATCAGCAGCTGGTCTCACC...ATACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp GTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATGTTCAGAGGAAGGGTaGGACCAGCTGCTGATTGCG +
Preference number: 4 (lower is better)
Translates to: VYSSKTHTVQRFSNTRFPCSEEG*DQLLIA
Trigger: CGCAATCAGCAGCTGGTCTCACCCTTCCTCTGAACA...TGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp TTCAAACACCAGGTTTCCATTTGTATTAAAATGGGCAAGATAATGAAGGCACAGAGCGCCTGCCTCCCTTaGATGAAGCTAGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: FKHQVSICIKMGKIMKAQSACLP*MKLGAG
Trigger: CCCAGCTCCTAGCTTCATTCAAGGGAGGCAGGCGCT...CTGTGCCTTCATTATCTTGCCCATTTTAATACAAATGGAAACCTGGTGTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399793.6
CDS-3UTR CCA 90 bp GCTTTCTATGGGTTAATACCACCCACTGCAAGACTAGAGATGGCAGTCAATGGATGCACACCCTCTAACTaGTCTTTGATAGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: AFYGLIPPTARLEMAVNGCTPSN*SLIAAV
Trigger: GACTGCAGCTATCAAAGACCAGTTAGAGGGTGTGCA...TCCATTGACTGCCATCTCTAGTCTTGCAGTGGGTGGTATTAACCCATAGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp CCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATCTGCAATACAGTGGCTaGGCCTGGGTCTTTCATCTG +
Preference number: 4 (lower is better)
Translates to: PPKPTQFRDFQTPGFHLYLQYSG*AWVFHL
Trigger: CAGATGAAAGACCCAGGCTCAGCCACTGTATTGCAG...ATACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp TCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTAAGTCCAGGATACCTCTaGGACGTCTGTGTCAGACAC +
Preference number: 4 (lower is better)
Translates to: SSKTHTVQRFSNTRFPFVSPGYL*DVCVRH
Trigger: GTGTCTGACACAGACGTCTCAGAGGTATCCTGGACT...TACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp GCTTTCTATGGGTTAATACCACCCACTGCAAGACTAGAGATGGCAGTCAATGGAATCCTTCTGAAAGGTTaGAGGTCCCATTATCAGTCC +
Preference number: 4 (lower is better)
Translates to: AFYGLIPPTARLEMAVNGILLKG*RSHYQS
Trigger: GGACTGATAATGGGACCTTCAACCTTTCAGAAGGAT...TCCATTGACTGCCATCTCTAGTCTTGCAGTGGGTGGTATTAACCCATAGAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp AACTTAAGTCTGAGCAGGCAGAATAGAGCTGTGCTCCCAACATCCCTATCACAATGGAGTGTATCCTTCTaGAAGGTTGAAGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: NLSLSRQNRAVLPTSLSQWSVSF*KVEGPI
Trigger: AATGGGACCTTCAACCTTTCAGAAGGATACACTCCA...TTGTGATAGGGATGTTGGGAGCACAGCTCTATTCTGCCTGCTCAGACTTAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp CAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATTAAAGGGATGGGGGCAGCCTaGGAAAGTGCTTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: QNPHSSEIFKHQVSICIKGMGAA*ESACCT
Trigger: TGTGCAGCAAGCACTTTCTCAGGCTGCCCCCATCCC...TTTAATACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp GCTTTCTATGGGTTAATACCACCCACTGCAAGACTAGAGATGGCAGTCAATGGAGTTAATACCACCCACTaGAAGACTAGAGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: AFYGLIPPTARLEMAVNGVNTTH*KTRDGS
Trigger: ACTGCCATCTCTAGTCTTGCAGTGGGTGGTATTAAC...TCCATTGACTGCCATCTCTAGTCTTGCAGTGGGTGGTATTAACCCATAGAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp GATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAACACAGTCATGTCCTCTTCTGGGATaGGGGCAGCCTGAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: DNEGTGSLCINKGHQTQSCPLLG*GQPEKV
Trigger: CACTTTCTCAGGCTGCCCCCATCCCAGAAGAGGACA...TGACTGTGTTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp CAGGTTTCCATTTGTATTAAAATGGGCAAGATAATGAAGGCACAGGCTCACTTTCTTCCCAGCTTTCACTaGGGCTTCTCCACAACTGTG +
Preference number: 4 (lower is better)
Translates to: QVSICIKMGKIMKAQAHFLPSFH*GFSTTV
Trigger: CACAGTTGTGGAGAAGCCTCAGTGAAAGCTGGGAAG...AAAGTGAGCCTGTGCCTTCATTATCTTGCCCATTTTAATACAAATGGAAACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306320.10
CDS-3UTR TCA 90 bp AATGGGCAAGATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAAGTCCAGGATACCTCTaGGACGTCTGTGTCAGACAC +
Preference number: 4 (lower is better)
Translates to: NGQDNEGTGSLCINKGHQSPGYL*DVCVRH
Trigger: GTGTCTGACACAGACGTCTCAGAGGTATCCTGGACT...TTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATCTTGCCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp TCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATCTTTGCTTGGTCTGTaGCCACTGTCCAACTGTTCC +
Preference number: 4 (lower is better)
Translates to: SSKTHTVQRFSNTRFPFVSLLGL*PLSNCS
Trigger: GGAACAGTTGGACAGTGGTCACAGACCAAGCAAAGA...TACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp CAGGTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTGATAGCTGCAGTCACTaGAGCTGTGATAACATCCCC +
Preference number: 4 (lower is better)
Translates to: QVYSSKTHTVQRFSNTRFDSCSH*SCDNIP
Trigger: GGGGATGTTATCACAGCTGCAGTGACTGCAGCTATC...AAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp GCTTTCTATGGGTTAATACCACCCACTGCAAGACTAGAGATGGCAGTCAATGGAATTTTGCTGTGCTTCTaGTTCCTGGTCTTGTGTAAG +
Preference number: 4 (lower is better)
Translates to: AFYGLIPPTARLEMAVNGILLCF*FLVLCK
Trigger: CTTACACAAGACCAGGAAGCAGAAGCACAGCAAAAT...TCCATTGACTGCCATCTCTAGTCTTGCAGTGGGTGGTATTAACCCATAGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp TGTATTAAAATGGGCAAGATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGACCAGAACAGCAGGTTaGCAGCGACGAAGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: CIKMGKIMKAQAHFVSIKTRTAG*QRRSRA
Trigger: TGCTCGGCTTCGTCGCTGCCAACCTGCTGTTCTGGT...CTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATCTTGCCCATTTTAATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306320.10
CDS-3UTR TCA 90 bp CCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATGTTCCTTCTTTCTCTTaGGCTCAGTGGGCAAACCAA +
Preference number: 4 (lower is better)
Translates to: PPKPTQFRDFQTPGFHLYVPSFS*AQWANQ
Trigger: TTGGTTTGCCCACTGAGCTCAAGAGAAAGAAGGAAC...ATACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp TGTATTAAAATGGGCAAGATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGGTGAGACCAGCTGCTaGTTGCGTCTCTTTGCTTGG +
Preference number: 4 (lower is better)
Translates to: CIKMGKIMKAQAHFVSIKGETSC*LRLFAW
Trigger: CCAAGCAAAGAGACGCAATCAGCAGCTGGTCTCACC...CTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATCTTGCCCATTTTAATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp ACAACTGAATCTGTTTACATCATAACCATTGTCTATGTGATACACAACTGCTTGTTACTCCCAGTACTGTaGCAGGCGGCTGGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: TTESVYIITIVYVIHNCLLLPVL*QAAGSE
Trigger: CTCACTTCCAGCCGCCTGTCACAGTACTGGGAGTAA...CAAGCAGTTGTGTATCACATAGACAATGGTTATGATGTAAACAGATTCAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399793.6
CDS-3UTR GCA 90 bp GATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAACACAGTCAAGACCAGCTGCTGATTaGGTCTCTTTGCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: DNEGTGSLCINKGHQTQSRPAAD*VSLLGL
Trigger: CAGACCAAGCAAAGAGACGCAATCAGCAGCTGGTCT...TGACTGTGTTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp AATTCAGGTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGCATCCCCAGCCAGGTTaGTCATCAGGTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: NSGIFLQNPHSSEIFKHQHPQPG*SSGERF
Trigger: AAACCTTTCACCTGATGAGCAACCTGGCTGGGGATG...CTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATACCTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp CAGGTTTCCATTTGTATTAAAATGGGCAAGATAATGAAGGCACAGGCTCACTTTCATCCCCAGCCAGGTTaGTCATCAGGTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: QVSICIKMGKIMKAQAHFHPQPG*SSGERF
Trigger: AAACCTTTCACCTGATGAGCAACCTGGCTGGGGATG...AAAGTGAGCCTGTGCCTTCATTATCTTGCCCATTTTAATACAAATGGAAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp GATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAACACAGTCAGATAGCTGCAGTCACTaGAGCTGTGATAACATCCCC +
Preference number: 4 (lower is better)
Translates to: DNEGTGSLCINKGHQTQSDSCSH*SCDNIP
Trigger: GGGGATGTTATCACAGCTGCAGTGACTGCAGCTATC...TGACTGTGTTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp AATGGGCAAGATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAGGCAGAATAGAGCTGTaGTCCCAACATCCCTATCAC +
Preference number: 4 (lower is better)
Translates to: NGQDNEGTGSLCINKGHQGRIEL*SQHPYH
Trigger: GTGATAGGGATGTTGGGAGCACAGCTCTATTCTGCC...TTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATCTTGCCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp CCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATGATTCTGCAATACAGTaGCTGAGCCTGGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: PPKPTQFRDFQTPGFHLYDSAIQ*LSLGLS
Trigger: TGAAAGACCCAGGCTCAGCCACTGTATTGCAGAATC...ATACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp GTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATGCACACCCTCTAACTaGTCTTTGATAGCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: VYSSKTHTVQRFSNTRFPCTPSN*SLIAAV
Trigger: GACTGCAGCTATCAAAGACCAGTTAGAGGGTGTGCA...TGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp GTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCAATGACGGAAATCAGGTaGTATACTCTCCATGGAGTC +
Preference number: 4 (lower is better)
Translates to: VYSSKTHTVQRFSNTRFPMTEIR*YTLHGV
Trigger: GACTCCATGGAGAGTATATCACCTGATTTCCGTCAT...TGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306320.10
CDS-3UTR TCA 90 bp ATATCAATCTATCAGTGTCAGCTGATATATATCCAATTAATTCACTGCAGGAGGCTGCAATACAGTGGCTaGGCCTGGGTCTTTCATCTG +
Preference number: 4 (lower is better)
Translates to: ISIYQCQLIYIQLIHCRRLQYSG*AWVFHL
Trigger: CAGATGAAAGACCCAGGCTCAGCCACTGTATTGCAG...CCTCCTGCAGTGAATTAATTGGATATATATCAGCTGACACTGATAGATTGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp ATTCAGGTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTGGAGTGTATCCTTCTaGAAGGTTGAAGGTCCCATT +
Preference number: 4 (lower is better)
Translates to: IQVYSSKTHTVQRFSNTRWSVSF*KVEGPI
Trigger: AATGGGACCTTCAACCTTTCAGAAGGATACACTCCA...CCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATACCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp AGATTTAAGAGATTTTTGGTAGTTGCTGGCATGGTCCCTCGACACTTAAAGTTTGTTCCTTCTTTCTCTTaGGCTCAGTGGGCAAACCAA +
Preference number: 4 (lower is better)
Translates to: RFKRFLVVAGMVPRHLKFVPSFS*AQWANQ
Trigger: TTGGTTTGCCCACTGAGCTCAAGAGAAAGAAGGAAC...AAACTTTAAGTGTCGAGGGACCATGCCAGCAACTACCAAAAATCTCTTAAATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp CAGGTTTCCATTTGTATTAAAATGGGCAAGATAATGAAGGCACAGGCTCACTTTAGGTTGCTCATCAGGTaGAAGGTTTGGTCACTGTTC +
Preference number: 4 (lower is better)
Translates to: QVSICIKMGKIMKAQAHFRLLIR*KVWSLF
Trigger: GAACAGTGACCAAACCTTTCACCTGATGAGCAACCT...AAAGTGAGCCTGTGCCTTCATTATCTTGCCCATTTTAATACAAATGGAAACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp GCTTTCTATGGGTTAATACCACCCACTGCAAGACTAGAGATGGCAGTCAATGGAAATGCCAGCTGTACCTaGAGATTTAAGAGATTTTTG +
Preference number: 4 (lower is better)
Translates to: AFYGLIPPTARLEMAVNGNASCT*RFKRFL
Trigger: CAAAAATCTCTTAAATCTTCAGGTACAGCTGGCATT...TCCATTGACTGCCATCTCTAGTCTTGCAGTGGGTGGTATTAACCCATAGAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp CACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATTAAAATGGGCAAGACCAGCTGCTGATTaGGTCTCTTTGCTTGGTCTG +
Preference number: 4 (lower is better)
Translates to: HTVQRFSNTRFPFVLKWARPAAD*VSLLGL
Trigger: CAGACCAAGCAAAGAGACGCAATCAGCAGCTGGTCT...TGCCCATTTTAATACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp ATGGGCAAGATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAACTGGTCTTTGATAGCTaGAGTCACTGCAGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: MGKIMKAQAHFVSIKDIKLVFDS*SHCSCD
Trigger: ATCACAGCTGCAGTGACTGCAGCTATCAAAGACCAG...TTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATCTTGCCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp GATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAACACAGTCACTGGTCTTTGATAGCTaGAGTCACTGCAGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: DNEGTGSLCINKGHQTQSLVFDS*SHCSCD
Trigger: ATCACAGCTGCAGTGACTGCAGCTATCAAAGACCAG...TGACTGTGTTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp CAGGTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTTCTCAGATGTCTCTATaGATCTGCCAAAATGCCAGC +
Preference number: 4 (lower is better)
Translates to: QVYSSKTHTVQRFSNTRFSQMSL*ICQNAS
Trigger: GCTGGCATTTTGGCAGATGCATAGAGACATCTGAGA...AAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp TCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATCTCAGATGTCTCTATaGATCTGCCAAAATGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSKTHTVQRFSNTRFPFVSQMSL*ICQNAS
Trigger: GCTGGCATTTTGGCAGATGCATAGAGACATCTGAGA...TACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp ATTCAGGTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGAGAAAACTTCCTCACTaGGTCGGTCAAGATCATCAG +
Preference number: 4 (lower is better)
Translates to: IQVYSSKTHTVQRFSNTRRKLPH*VGQDHQ
Trigger: CTGATGATCTTGACCGACCCAGTGAGGAAGTTTTCT...CCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATACCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp CCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATTGTGCTTCTGCTTCCTaGTCTTGTGTAAGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: PPKPTQFRDFQTPGFHLYCASAS*SCVSPN
Trigger: ATTGGGACTTACACAAGACCAGGAAGCAGAAGCACA...ATACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp CCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATATTTTTGGTAGTTGCTaGCATGGTCCCTCGACACTT +
Preference number: 4 (lower is better)
Translates to: PPKPTQFRDFQTPGFHLYIFGSC*HGPSTL
Trigger: AAGTGTCGAGGGACCATGCCAGCAACTACCAAAAAT...ATACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp CAGGTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTATTTTTGGTAGTTGCTaGCATGGTCCCTCGACACTT +
Preference number: 4 (lower is better)
Translates to: QVYSSKTHTVQRFSNTRFIFGSC*HGPSTL
Trigger: AAGTGTCGAGGGACCATGCCAGCAACTACCAAAAAT...AAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp AATGGGCAAGATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAAATGAAGCTAGGAGCTaGGTTATTATCACTGCCCCC +
Preference number: 4 (lower is better)
Translates to: NGQDNEGTGSLCINKGHQNEARS*VIITAP
Trigger: GGGGGCAGTGATAATAACCCAGCTCCTAGCTTCATT...TTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATCTTGCCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399793.6
CDS-3UTR CCA 90 bp CAGGTTTCCATTTGTATTAAAATGGGCAAGATAATGAAGGCACAGGCTCACTTTTTCCCAGCTTTTGCCTaGTCCAAAGTCTTCACCTTC +
Preference number: 4 (lower is better)
Translates to: QVSICIKMGKIMKAQAHFFPAFA*SKVFTF
Trigger: GAAGGTGAAGACTTTGGACCAGGCAAAAGCTGGGAA...AAAGTGAGCCTGTGCCTTCATTATCTTGCCCATTTTAATACAAATGGAAACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399793.6
CDS-3UTR TCA 90 bp AGATTTAAGAGATTTTTGGTAGTTGCTGGCATGGTCCCTCGACACTTAAAGTTTATCCTTCTGAAAGGTTaGAGGTCCCATTATCAGTCC +
Preference number: 4 (lower is better)
Translates to: RFKRFLVVAGMVPRHLKFILLKG*RSHYQS
Trigger: GGACTGATAATGGGACCTTCAACCTTTCAGAAGGAT...AAACTTTAAGTGTCGAGGGACCATGCCAGCAACTACCAAAAATCTCTTAAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp ATATCAATCTATCAGTGTCAGCTGATATATATCCAATTAATTCACTGCAGGAGGTCTTTGCTTGGTCTGTaGCCACTGTCCAACTGTTCC +
Preference number: 4 (lower is better)
Translates to: ISIYQCQLIYIQLIHCRRSLLGL*PLSNCS
Trigger: GGAACAGTTGGACAGTGGTCACAGACCAAGCAAAGA...CCTCCTGCAGTGAATTAATTGGATATATATCAGCTGACACTGATAGATTGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp CAGGTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTAATTCACTCTCAATTTaGTCCAGCTCTGACTGGTCA +
Preference number: 4 (lower is better)
Translates to: QVYSSKTHTVQRFSNTRFNSLSI*SSSDWS
Trigger: TGACCAGTCAGAGCTGGATCAAATTGAGAGTGAATT...AAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATACCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp GTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCACATCAAACACAGTCATaGGGCACTAATGACATAAGC +
Preference number: 4 (lower is better)
Translates to: VYSSKTHTVQRFSNTRFPHQTQS*GTNDIS
Trigger: GCTTATGTCATTAGTGCCTCATGACTGTGTTTGATG...TGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp TTCAAACACCAGGTTTCCATTTGTATTAAAATGGGCAAGATAATGAAGGCACAGTCTCCATGGAGTCAATaGAAGGAACCAGAACAGCAG +
Preference number: 4 (lower is better)
Translates to: FKHQVSICIKMGKIMKAQSPWSQ*KEPEQQ
Trigger: CTGCTGTTCTGGTTCCTTGCATTGACTCCATGGAGA...CTGTGCCTTCATTATCTTGCCCATTTTAATACAAATGGAAACCTGGTGTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306320.10
CDS-3UTR GCA 90 bp TCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTAATTTTGCTGTGCTTCTaGTTCCTGGTCTTGTGTAAG +
Preference number: 4 (lower is better)
Translates to: SSKTHTVQRFSNTRFPFVILLCF*FLVLCK
Trigger: CTTACACAAGACCAGGAAGCAGAAGCACAGCAAAAT...TACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp CCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATGAAGACTTCTTATTTTaGTGTGCTTCTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PPKPTQFRDFQTPGFHLYEDFLF*CASASW
Trigger: CCAGGAAGCAGAAGCACAGCAAAATAAGAAGTCTTC...ATACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp AGATTTAAGAGATTTTTGGTAGTTGCTGGCATGGTCCCTCGACACTTAAAGTTTGTTAATACCACCCACTaGAAGACTAGAGATGGCAGT +
Preference number: 4 (lower is better)
Translates to: RFKRFLVVAGMVPRHLKFVNTTH*KTRDGS
Trigger: ACTGCCATCTCTAGTCTTGCAGTGGGTGGTATTAAC...AAACTTTAAGTGTCGAGGGACCATGCCAGCAACTACCAAAAATCTCTTAAATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp GATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAACACAGTCAATGTCTCTATGCATCTaGCAAAATGCCAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: DNEGTGSLCINKGHQTQSMSLCI*QNASCT
Trigger: GGTACAGCTGGCATTTTGGCAGATGCATAGAGACAT...TGACTGTGTTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp AATGGGCAAGATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAATGTGCTTCTGCTTCCTaGTCTTGTGTAAGTCCCAAT +
Preference number: 4 (lower is better)
Translates to: NGQDNEGTGSLCINKGHQCASAS*SCVSPN
Trigger: ATTGGGACTTACACAAGACCAGGAAGCAGAAGCACA...TTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATCTTGCCCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp TATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATGCTGAAATTCATCCATaGTTCTGCAATACAGTGGCT +
Preference number: 4 (lower is better)
Translates to: YIPPKPTQFRDFQTPGFHAEIHP*FCNTVA
Trigger: AGCCACTGTATTGCAGAATCATGGATGAATTTCAGC...ATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp ATGGGCAAGATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAAGCTGAAATTCATCCATaGTTCTGCAATACAGTGGCT +
Preference number: 4 (lower is better)
Translates to: MGKIMKAQAHFVSIKDIKAEIHP*FCNTVA
Trigger: AGCCACTGTATTGCAGAATCATGGATGAATTTCAGC...TTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATCTTGCCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp TGTATTAAAATGGGCAAGATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGAGGTTGCTCATCAGGTaGAAGGTTTGGTCACTGTTC +
Preference number: 4 (lower is better)
Translates to: CIKMGKIMKAQAHFVSIKRLLIR*KVWSLF
Trigger: GAACAGTGACCAAACCTTTCACCTGATGAGCAACCT...CTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATCTTGCCCATTTTAATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp CAGGTTTCCATTTGTATTAAAATGGGCAAGATAATGAAGGCACAGGCTCACTTTAATTCACTCTCAATTTaGTCCAGCTCTGACTGGTCA +
Preference number: 4 (lower is better)
Translates to: QVSICIKMGKIMKAQAHFNSLSI*SSSDWS
Trigger: TGACCAGTCAGAGCTGGATCAAATTGAGAGTGAATT...AAAGTGAGCCTGTGCCTTCATTATCTTGCCCATTTTAATACAAATGGAAACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp AAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAACACAGTCATGAGGCACCTAATATTTATCTCTaGCAACACAGTGGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: KAQAHFVSIKDIKHSHEAPNIYL*QHSGVY
Trigger: ATACACACCACTGTGTTGTCAGAGATAAATATTAGG...TGCCTCATGACTGTGTTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp ATTCAGGTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGGCAGTCAATGGAGCATaGTTCTTTACAAATAAGCCT +
Preference number: 4 (lower is better)
Translates to: IQVYSSKTHTVQRFSNTRAVNGA*FFTNKP
Trigger: AGGCTTATTTGTAAAGAAGCATGCTCCATTGACTGC...CCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATACCTGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp TCTACAACTGCAGAAATAACATGGAAACGTTTCAGTCTATCCAGAGTACTTAAAGAGATTTTTGGTAGTTaGTGGCATGGTCCCTCGACA +
Preference number: 4 (lower is better)
Translates to: STTAEITWKRFSLSRVLKEIFGS*WHGPST
Trigger: TGTCGAGGGACCATGCCAGCAACTACCAAAAATCTC...TTTAAGTACTCTGGATAGACTGAAACGTTTCCATGTTATTTCTGCAGTTGTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp ACAACTGAATCTGTTTACATCATAACCATTGTCTATGTGATACACAACTGCTTGGAGATTTTTGGTAGTTaGTGGCATGGTCCCTCGACA +
Preference number: 4 (lower is better)
Translates to: TTESVYIITIVYVIHNCLEIFGS*WHGPST
Trigger: TGTCGAGGGACCATGCCAGCAACTACCAAAAATCTC...CAAGCAGTTGTGTATCACATAGACAATGGTTATGATGTAAACAGATTCAGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp GATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAACACAGTCAATGCATCTGCCAAAATaGCAGCTGTACCTGAAGATT +
Preference number: 4 (lower is better)
Translates to: DNEGTGSLCINKGHQTQSMHLPK*QLYLKI
Trigger: AATCTTCAGGTACAGCTGGCATTTTGGCAGATGCAT...TGACTGTGTTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp TTCAAACACCAGGTTTCCATTTGTATTAAAATGGGCAAGATAATGAAGGCACAGATGTCTCTATGCATCTaGCAAAATGCCAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: FKHQVSICIKMGKIMKAQMSLCI*QNASCT
Trigger: GGTACAGCTGGCATTTTGGCAGATGCATAGAGACAT...CTGTGCCTTCATTATCTTGCCCATTTTAATACAAATGGAAACCTGGTGTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp TCTACAACTGCAGAAATAACATGGAAACGTTTCAGTCTATCCAGAGTACTTAAAGATTCTGCAATACAGTaGCTGAGCCTGGGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: STTAEITWKRFSLSRVLKDSAIQ*LSLGLS
Trigger: TGAAAGACCCAGGCTCAGCCACTGTATTGCAGAATC...TTTAAGTACTCTGGATAGACTGAAACGTTTCCATGTTATTTCTGCAGTTGTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp AAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAACACAGTCATGAGGCAACTGCAGAAATAACATaGAAACGTTTCAGTCTATCC +
Preference number: 4 (lower is better)
Translates to: KAQAHFVSIKDIKHSHEATAEIT*KRFSLS
Trigger: GGATAGACTGAAACGTTTCCATGTTATTTCTGCAGT...TGCCTCATGACTGTGTTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp GTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCAAGAGATGGCAGTCAATaGAGCATGCTTCTTTACAAA +
Preference number: 4 (lower is better)
Translates to: VYSSKTHTVQRFSNTRFPRDGSQ*SMLLYK
Trigger: TTTGTAAAGAAGCATGCTCCATTGACTGCCATCTCT...TGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp TCTACAACTGCAGAAATAACATGGAAACGTTTCAGTCTATCCAGAGTACTTAAACACGCCCAAGTATCATaGCGGAAATCAGGTGATATA +
Preference number: 4 (lower is better)
Translates to: STTAEITWKRFSLSRVLKHAQVS*RKSGDI
Trigger: TATATCACCTGATTTCCGTCATGATACTTGGGCGTG...TTTAAGTACTCTGGATAGACTGAAACGTTTCCATGTTATTTCTGCAGTTGTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000306320.10
CDS-3UTR TCA 90 bp CAGGTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCTAATATTTATCTCTaGCAACACAGTGGTGTGTAT +
Preference number: 4 (lower is better)
Translates to: QVYSSKTHTVQRFSNTRFPNIYL*QHSGVY
Trigger: ATACACACCACTGTGTTGTCAGAGATAAATATTAGG...AAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATACCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp TTCAAACACCAGGTTTCCATTTGTATTAAAATGGGCAAGATAATGAAGGCACAGGAAGACTTCTTATTTTaGTGTGCTTCTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FKHQVSICIKMGKIMKAQEDFLF*CASASW
Trigger: CCAGGAAGCAGAAGCACAGCAAAATAAGAAGTCTTC...CTGTGCCTTCATTATCTTGCCCATTTTAATACAAATGGAAACCTGGTGTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp AGATTTAAGAGATTTTTGGTAGTTGCTGGCATGGTCCCTCGACACTTAAAGTTTGCAGTCAATGGAGCATaGTTCTTTACAAATAAGCCT +
Preference number: 4 (lower is better)
Translates to: RFKRFLVVAGMVPRHLKFAVNGA*FFTNKP
Trigger: AGGCTTATTTGTAAAGAAGCATGCTCCATTGACTGC...AAACTTTAAGTGTCGAGGGACCATGCCAGCAACTACCAAAAATCTCTTAAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp ATGGGCAAGATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAATCTCCCTTTAACATTTaGCAAAACTCAGTCCAGATA +
Preference number: 4 (lower is better)
Translates to: MGKIMKAQAHFVSIKDIKSPFNI*QNSVQI
Trigger: TATCTGGACTGAGTTTTGCCAAATGTTAAAGGGAGA...TTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATCTTGCCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp CAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATTAAACCTGGGTCTTTCATCTaGTTTGGAATTGATAACTTC +
Preference number: 4 (lower is better)
Translates to: QNPHSSEIFKHQVSICIKPGSFI*FGIDNF
Trigger: GAAGTTATCAATTCCAAACCAGATGAAAGACCCAGG...TTTAATACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp TGTATTAAAATGGGCAAGATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGAGAGATGGCAGTCAATaGAGCATGCTTCTTTACAAA +
Preference number: 4 (lower is better)
Translates to: CIKMGKIMKAQAHFVSIKRDGSQ*SMLLYK
Trigger: TTTGTAAAGAAGCATGCTCCATTGACTGCCATCTCT...CTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATCTTGCCCATTTTAATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp AATTCAGGTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGAAAACAAAACTAGGTTaGTTTCAGCTCTTTAGTCCT +
Preference number: 4 (lower is better)
Translates to: NSGIFLQNPHSSEIFKHQKTKLG*FQLFSP
Trigger: AGGACTAAAGAGCTGAAACCAACCTAGTTTTGTTTT...CTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATACCTGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR TCA 90 bp CAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATTAAAAATGCCAGCTGTACCTaGAGATTTAAGAGATTTTTG +
Preference number: 4 (lower is better)
Translates to: QNPHSSEIFKHQVSICIKNASCT*RFKRFL
Trigger: CAAAAATCTCTTAAATCTTCAGGTACAGCTGGCATT...TTTAATACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR GCA 90 bp CACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATTAAAATGGGCACTGGGTTATTATCACTaGCCCCTTCTAAAAATAAAT +
Preference number: 4 (lower is better)
Translates to: HTVQRFSNTRFPFVLKWALGYYH*PLLKIN
Trigger: ATTTATTTTTAGAAGGGGGCAGTGATAATAACCCAG...TGCCCATTTTAATACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000399793.6
CDS-3UTR CCA 90 bp TGTATTAAAATGGGCAAGATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGACTGCAGAAATAACATaGAAACGTTTCAGTCTATCC +
Preference number: 4 (lower is better)
Translates to: CIKMGKIMKAQAHFVSIKTAEIT*KRFSLS
Trigger: GGATAGACTGAAACGTTTCCATGTTATTTCTGCAGT...CTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATCTTGCCCATTTTAATACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp ATATCAATCTATCAGTGTCAGCTGATATATATCCAATTAATTCACTGCAGGAGGAAAACAAAACTAGGTTaGTTTCAGCTCTTTAGTCCT +
Preference number: 4 (lower is better)
Translates to: ISIYQCQLIYIQLIHCRRKTKLG*FQLFSP
Trigger: AGGACTAAAGAGCTGAAACCAACCTAGTTTTGTTTT...CCTCCTGCAGTGAATTAATTGGATATATATCAGCTGACACTGATAGATTGATAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CCA 90 bp CAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATTAAACCTTACTCAGAAAGTTaGTGTTTACAAACTTCCAAA +
Preference number: 4 (lower is better)
Translates to: QNPHSSEIFKHQVSICIKPYSES*CLQTSK
Trigger: TTTGGAAGTTTGTAAACACCAACTTTCTGAGTAAGG...TTTAATACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399793.6
CDS GCA 90 bp CTCCTCGGCGTGCTCCGGAGGCGCCGGGCTCGCCATCTTCAGCTGTaGTTCCAGACAGGGACGGGGCCGGGCGCGCGCGCGGGCGCGCCT +
Preference number: 5 (lower is better)
Translates to: LLGVLRRRRARHLQL*FQTGTGPGARAGAP
Trigger: AGGCGCGCCCGCGCGCGCGCCCGGCCCCGTCCCTGTCTGGAAGCACAGCTGAAGATGGCGAGCCCGGCGCCTCCGGAGCACGCCGAGGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682808.1
ENST00000684521.1
CDS GCA 90 bp GGCGCCTGCTCCTCGGCGGCAGGAGCCGGGCATCCCTCCTCGGCGTaGTCCGGAGGCGCCGGGCTCGCCATCTTCAGCTGTGCTTCCAGA +
Preference number: 5 (lower is better)
Translates to: GACSSAAGAGHPSSA*SGGAGLAIFSCASR
Trigger: TCTGGAAGCACAGCTGAAGATGGCGAGCCCGGCGCCTCCGGAGCACGCCGAGGAGGGATGCCCGGCTCCTGCCGCCGAGGAGCAGGCGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000306320.10
ENST00000509048.2
ENST00000682229.1
ENST00000682564.1
ENST00000682808.1
ENST00000682982.1
ENST00000683045.1
ENST00000683527.1
ENST00000683973.1
ENST00000684521.1
CDS TCA 90 bp ACCTGTAGGTGCAGGTGCCTGAGGGTCGGCCGACCACCTCGCATCTaGGGCTGGATCCGCACACGGAGAACGACAACTGCTCACAGGGAC +
Preference number: 5 (lower is better)
Translates to: TCRCRCLRVGRPPRI*GWIRTRRTTTAHRD
Trigger: GTCCCTGTGAGCAGTTGTCGTTCTCCGTGTGCGGATCCAGCCTCAGATGCGAGGTGGTCGGCCGACCCTCAGGCACCTGCACCTACAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS GCA 90 bp CTGTCCTTGGACAACGGCCTGATCTACAGGATTGCAGGGAGGCTCTaGCTCGACAGAGGTCTGGTTCCCCACAGGGAGCCCAGCACCCAG +
Preference number: 5 (lower is better)
Translates to: LSLDNGLIYRIAGRL*LDRGLVPHREPSTQ
Trigger: CTGGGTGCTGGGCTCCCTGTGGGGAACCAGACCTCTGTCGAGGCAGAGCCTCCCTGCAATCCTGTAGATCAGGCCGTTGTCCAAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS TCA 90 bp GCGAAGTTTTCAAGCACGATGGGAACACCTGTAGGTGCAGGTGCCTaGGGGTCGGCCGACCACCTCGCATCTGAGGCTGGATCCGCACAC +
Preference number: 5 (lower is better)
Translates to: AKFSSTMGTPVGAGA*GSADHLASEAGSAH
Trigger: GTGTGCGGATCCAGCCTCAGATGCGAGGTGGTCGGCCGACCCTCAGGCACCTGCACCTACAGGTGTTCCCATCGTGCTTGAAAACTTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS TCA 90 bp CAGCAGGGGCCTGACATCACCCTAGCTCCTGGCACCGCAGCTGGCTaGCATTGGGAGCGCCATAAAGCCCTTTTGCCTGGTCCAAAGTCT +
Preference number: 5 (lower is better)
Translates to: QQGPDITLAPGTAAG*HWERHKALLPGPKS
Trigger: AGACTTTGGACCAGGCAAAAGGGCTTTATGGCGCTCCCAATGTCAGCCAGCTGCGGTGCCAGGAGCTAGGGTGATGTCAGGCCCCTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682142.1
CDS GCA 90 bp GAGGCTGGATCCGCACACGGAGAACGACAACTGCTCACAGGGACGTaGGTCCGGAGGAAAGTTGCGGTGAGTGTCAGAACAGCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: EAGSAHGERQLLTGT*VRRKVAVSVRTAGW
Trigger: CCAACCTGCTGTTCTGACACTCACCGCAACTTTCCTCCGGACGCACGTCCCTGTGAGCAGTTGTCGTTCTCCGTGTGCGGATCCAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509048.2
CDS GCA 90 bp GAGGCTGGATCCGCACACGGAGAACGACAACTGCTCACAGGGACGTaGGTCCGGAGGAAAGTTGCGGTGAGTGTCTACCAGAACAGCAGG +
Preference number: 5 (lower is better)
Translates to: EAGSAHGERQLLTGT*VRRKVAVSVYQNSR
Trigger: CCTGCTGTTCTGGTAGACACTCACCGCAACTTTCCTCCGGACGCACGTCCCTGTGAGCAGTTGTCGTTCTCCGTGTGCGGATCCAGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682808.1
CDS TCA 90 bp AGCACCCAGGTTGGGCCTCAGCACAGAAAGGGGCTCAACACGGACTaGCCCAGGAACACACAAACCCCATGTGGCCCTGATGACATGTCA +
Preference number: 5 (lower is better)
Translates to: STQVGPQHRKGLNTD*PRNTQTPCGPDDMS
Trigger: TGACATGTCATCAGGGCCACATGGGGTTTGTGTGTTCCTGGGTCAGTCCGTGTTGAGCCCCTTTCTGTGCTGAGGCCCAACCTGGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS GCA 90 bp AGTGATGCGGCTGCAAGCCATGGAATGCCCGCAACTCCCAGGAGCTaGAAGAGGCAAGGAATGGATCCTTCCTTAGAGACTCCAGAGGGA +
Preference number: 5 (lower is better)
Translates to: SDAAASHGMPATPRS*KRQGMDPSLETPEG
Trigger: TCCCTCTGGAGTCTCTAAGGAAGGATCCATTCCTTGCCTCTTGCAGCTCCTGGGAGTTGCGGGCATTCCATGGCTTGCAGCCGCATCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CCA 90 bp GGCACCGTTTTGAACGGGTACCTAATCTGGTCCAGATATGCCTGCTaGGGCTGCAAGAACCAAGACACGTTCAAGCACGTTTGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: GTVLNGYLIWSRYAC*GCKNQDTFKHVCSG
Trigger: GCCGGAGCAAACGTGCTTGAACGTGTCTTGGTTCTTGCAGCCCCAGCAGGCATATCTGGACCAGATTAGGTACCCGTTCAAAACGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS GCA 90 bp TATGCCTGCTGGGGCTGCAAGAACCAAGACACGTTCAAGCACGTTTaGTCCGGCAAGCTTGGGCGAGCAGGTCAAGACCTCAGAGTTTTA +
Preference number: 5 (lower is better)
Translates to: YACWGCKNQDTFKHV*SGKLGRAGQDLRVL
Trigger: TAAAACTCTGAGGTCTTGACCTGCTCGCCCAAGCTTGCCGGAGCAAACGTGCTTGAACGTGTCTTGGTTCTTGCAGCCCCAGCAGGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS GCA 90 bp TGCGGCACCGTTTTGAACGGGTACCTAATCTGGTCCAGATATGCCTaGTGGGGCTGCAAGAACCAAGACACGTTCAAGCACGTTTGCTCC +
Preference number: 5 (lower is better)
Translates to: CGTVLNGYLIWSRYA*WGCKNQDTFKHVCS
Trigger: GGAGCAAACGTGCTTGAACGTGTCTTGGTTCTTGCAGCCCCAGCAGGCATATCTGGACCAGATTAGGTACCCGTTCAAAACGGTGCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS CCA 90 bp CTGCAAGAACCAAGACACGTTCAAGCACGTTTGCTCCGGCAAGCTTaGGCGAGCAGGTCAAGACCTCAGAGTTTTAGAAAGCAGGGGCGA +
Preference number: 5 (lower is better)
Translates to: LQEPRHVQARLLRQA*ASRSRPQSFRKQGR
Trigger: TCGCCCCTGCTTTCTAAAACTCTGAGGTCTTGACCTGCTCGCCCAAGCTTGCCGGAGCAAACGTGCTTGAACGTGTCTTGGTTCTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS TCA 90 bp GAATCATCAAGGACTGATCCACAGACCAACTCTGGCATGAAACCCTaGTGCATGGAGATGCCCCACCTCAAGGCAGCCTGGATACGTGTG +
Preference number: 5 (lower is better)
Translates to: ESSRTDPQTNSGMKP*CMEMPHLKAAWIRV
Trigger: CACACGTATCCAGGCTGCCTTGAGGTGGGGCATCTCCATGCATCAGGGTTTCATGCCAGAGTTGGTCTGTGGATCAGTCCTTGATGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS TCA 90 bp TCCTTCCTTAGAGACTCCAGAGGGAATGCAGCCCTGCCAACGCTTTaGTTTGGGCCCAGTGACACTGACTTCGGACTACTGTCCTTCAGA +
Preference number: 5 (lower is better)
Translates to: SFLRDSRGNAALPTL*FGPSDTDFGLLSFR
Trigger: TCTGAAGGACAGTAGTCCGAAGTCAGTGTCACTGGGCCCAAATCAAAGCGTTGGCAGGGCTGCATTCCCTCTGGAGTCTCTAAGGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS GCA 90 bp TTCCCTGGCCTTTCTGAAGAGCGCTTTTTGGAGAGACAAACCTGTTaGTCAGGGGCTGAGCATTCCCGTGTGTTCTCCCTGTACTTCACC +
Preference number: 5 (lower is better)
Translates to: FPGLSEERFLERQTC*SGAEHSRVFSLYFT
Trigger: GGTGAAGTACAGGGAGAACACACGGGAATGCTCAGCCCCTGAGCAACAGGTTTGTCTCTCCAAAAAGCGCTCTTCAGAAAGGCCAGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS GCA 90 bp CTGGCACCGCAGCTGGCTGACATTGGGAGCGCCATAAAGCCCTTTTaGCTGGTCCAAAGTCTTCACCTTCAGGCATTTCTGCCCTTTAAA +
Preference number: 5 (lower is better)
Translates to: LAPQLADIGSAIKPF*LVQSLHLQAFLPFK
Trigger: TTTAAAGGGCAGAAATGCCTGAAGGTGAAGACTTTGGACCAGGCAAAAGGGCTTTATGGCGCTCCCAATGTCAGCCAGCTGCGGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682142.1
CDS CCA 90 bp CAGGTGACTGATGAATGCGGCACCGTTTTGAACGGGTACCTAATCTaGTCCAGATATGCCTGCTGGGGCTGCAAGAACCAAGACACGTTC +
Preference number: 5 (lower is better)
Translates to: QVTDECGTVLNGYLI*SRYACWGCKNQDTF
Trigger: GAACGTGTCTTGGTTCTTGCAGCCCCAGCAGGCATATCTGGACCAGATTAGGTACCCGTTCAAAACGGTGCCGCATTCATCAGTCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS TCA 90 bp GGTTGCTCATCAGGTGAAAGGTTTGGTCACTGTTCAGAGGAAGGGTaGGACCAGCTGCTGATTGCGTCTCTTTGCTTGGTCTGTGACCAC +
Preference number: 5 (lower is better)
Translates to: GCSSGERFGHCSEEG*DQLLIASLCLVCDH
Trigger: GTGGTCACAGACCAAGCAAAGAGACGCAATCAGCAGCTGGTCTCACCCTTCCTCTGAACAGTGACCAAACCTTTCACCTGATGAGCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000509977.2
ENST00000510362.6
ENST00000682033.1
ENST00000682142.1
ENST00000682229.1
ENST00000682564.1
ENST00000682628.1
ENST00000682982.1
ENST00000683045.1
ENST00000683130.1
ENST00000683169.1
ENST00000683414.1
ENST00000683527.1
ENST00000683539.1
ENST00000684456.1
ENST00000684521.1
ENST00000684695.1
CDS GCA 90 bp GTTTTGAACGGGTACCTAATCTGGTCCAGATATGCCTGCTGGGGCTaGAAGAACCAAGACACGTTCAAGCACGTTTGCTCCGGCAAGCTT +
Preference number: 5 (lower is better)
Translates to: VLNGYLIWSRYACWG*KNQDTFKHVCSGKL
Trigger: AAGCTTGCCGGAGCAAACGTGCTTGAACGTGTCTTGGTTCTTGCAGCCCCAGCAGGCATATCTGGACCAGATTAGGTACCCGTTCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS CCA 90 bp ACGAAGGAGACAGACATTTCCCTGGCCTTTCTGAAGAGCGCTTTTTaGAGAGACAAACCTGTTGCTCAGGGGCTGAGCATTCCCGTGTGT +
Preference number: 5 (lower is better)
Translates to: TKETDISLAFLKSAF*RDKPVAQGLSIPVC
Trigger: ACACACGGGAATGCTCAGCCCCTGAGCAACAGGTTTGTCTCTCCAAAAAGCGCTCTTCAGAAAGGCCAGGGAAATGTCTGTCTCCTTCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS TCA 90 bp GTGAAAGGTTTGGTCACTGTTCAGAGGAAGGGTGAGACCAGCTGCTaGTTGCGTCTCTTTGCTTGGTCTGTGACCACTGTCCAACTGTTC +
Preference number: 5 (lower is better)
Translates to: VKGLVTVQRKGETSC*LRLFAWSVTTVQLF
Trigger: GAACAGTTGGACAGTGGTCACAGACCAAGCAAAGAGACGCAATCAGCAGCTGGTCTCACCCTTCCTCTGAACAGTGACCAAACCTTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000509977.2
ENST00000510362.6
ENST00000682033.1
ENST00000682142.1
ENST00000682229.1
ENST00000682564.1
ENST00000682628.1
ENST00000682982.1
ENST00000683045.1
ENST00000683130.1
ENST00000683169.1
ENST00000683414.1
ENST00000683527.1
ENST00000683539.1
ENST00000684456.1
ENST00000684521.1
ENST00000684695.1
CDS GCA 90 bp TTTGACATAGACAGAAGAGAAGGTCAGGTGAGCATGAAAACAGATTaGAGTGATGCGGCTGCAAGCCATGGAATGCCCGCAACTCCCAGG +
Preference number: 5 (lower is better)
Translates to: FDIDRREGQVSMKTD*SDAAASHGMPATPR
Trigger: CCTGGGAGTTGCGGGCATTCCATGGCTTGCAGCCGCATCACTGCAATCTGTTTTCATGCTCACCTGACCTTCTCTTCTGTCTATGTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS TCA 90 bp ATAAATAAGAATCATCAAGGACTGATCCACAGACCAACTCTGGCATaGAACCCTGATGCATGGAGATGCCCCACCTCAAGGCAGCCTGGA +
Preference number: 5 (lower is better)
Translates to: INKNHQGLIHRPTLA*NPDAWRCPTSRQPG
Trigger: TCCAGGCTGCCTTGAGGTGGGGCATCTCCATGCATCAGGGTTTCATGCCAGAGTTGGTCTGTGGATCAGTCCTTGATGATTCTTATTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS TCA 90 bp GGCCCTGATGACATGTCAGCTGGGCGAAGTAGACAGCTACTGTGCTaGAGGCCCTTCTATTTGACGCTTTTATTGACCTCTTATAAAGCC +
Preference number: 5 (lower is better)
Translates to: GPDDMSAGRSRQLLC*RPFYLTLLLTSYKA
Trigger: GGCTTTATAAGAGGTCAATAAAAGCGTCAAATAGAAGGGCCTTCAGCACAGTAGCTGTCTACTTCGCCCAGCTGACATGTCATCAGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS-3UTR CAA 90 bp ATGGGCAAGATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAAAACCAGAACAGCAGGTaGGCAGCGACGAAGCCGAGC +
Preference number: 5 (lower is better)
Translates to: MGKIMKAQAHFVSIKDIKNQNSR*AATKPS
Trigger: GCTCGGCTTCGTCGCTGCCAACCTGCTGTTCTGGTT...TTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATCTTGCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306320.10
CDS TCA 90 bp GATCATCAGAAGTGTCTGTCTGTGGAGTGTATCCTTCTGAAAGGTTaGAGGTCCCATTATCAGTCCAGGATACCTCTGAGACGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: DHQKCLSVECILLKG*RSHYQSRIPLRRLC
Trigger: ACACAGACGTCTCAGAGGTATCCTGGACTGATAATGGGACCTTCAACCTTTCAGAAGGATACACTCCACAGACAGACACTTCTGATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000509977.2
ENST00000510362.6
ENST00000682142.1
ENST00000682229.1
ENST00000682564.1
ENST00000682628.1
ENST00000682982.1
ENST00000683045.1
ENST00000683130.1
ENST00000683169.1
ENST00000683414.1
ENST00000683527.1
ENST00000683539.1
ENST00000684456.1
ENST00000684521.1
ENST00000684695.1
CDS TCA 90 bp CTCAGAAAGTTGGTGTTTACAAACTTCCAAAGCGCCTGCCTCCCTTaGATGAAGCTAGGAGCTGGGTTATTATCACTGCCCCCTTCTAAA +
Preference number: 5 (lower is better)
Translates to: LRKLVFTNFQSACLP*MKLGAGLLSLPPSK
Trigger: TTTAGAAGGGGGCAGTGATAATAACCCAGCTCCTAGCTTCATTCAAGGGAGGCAGGCGCTTTGGAAGTTTGTAAACACCAACTTTCTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399793.6
CDS TCA 90 bp CAGGGATCACGTTTCTCTTCTTATATCCAATGTCACCCTCTCTCCTaGGTCTCTTGGCAAGTCTGCATCCTGCCCATGAAAATCTTTCAC +
Preference number: 5 (lower is better)
Translates to: QGSRFSSYIQCHPLS*VSWQVCILPMKIFH
Trigger: GTGAAAGATTTTCATGGGCAGGATGCAGACTTGCCAAGAGACTCAGGAGAGAGGGTGACATTGGATATAAGAAGAGAAACGTGATCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682229.1
CDS TCA 90 bp TTCTGCCATTTCACAGGACAGAGAGGTTCAGATGGTATAGGAGGCTaGCTCATAGCTCACAAAGATACCAAGTCACAATCCCTGGAATCC +
Preference number: 5 (lower is better)
Translates to: FCHFTGQRGSDGIGG*LIAHKDTKSQSLES
Trigger: GGATTCCAGGGATTGTGACTTGGTATCTTTGTGAGCTATGAGTCAGCCTCCTATACCATCTGAACCTCTCTGTCCTGTGAAATGGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CCA 90 bp TTTAGATTCCTGTCACTAAAATTCTATTTCAGAGCTACATCTTGGTaGCTCAGTCCCCTCCCTCACCCTCCCTCCATTAAGCACAACACG +
Preference number: 5 (lower is better)
Translates to: FRFLSLKFYFRATSW*LSPLPHPPSIKHNT
Trigger: CGTGTTGTGCTTAATGGAGGGAGGGTGAGGGAGGGGACTGAGCCACCAAGATGTAGCTCTGAAATAGAATTTTAGTGACAGGAATCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682828.1
CDS CCA 90 bp TGCACATCAGTCCACACGGACCTCCACCAAAAGCATCCCTCCATTTaGGGTGCATTTAGTGAAATTAAATGTCTCTTTGTAACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: CTSVHTDLHQKHPSI*GAFSEIKCLFVTSW
Trigger: CCAGGAGGTTACAAAGAGACATTTAATTTCACTAAATGCACCCCAAATGGAGGGATGCTTTTGGTGGAGGTCCGTGTGGACTGATGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS GCA 90 bp TGGCCTCCCAGCAGATTTGAAAGGAAACCTGAAGACTTCTTATTTTaGTGTGCTTCTGCTTCCTGGTCTTGTGTAAGTCCCAATTCACTC +
Preference number: 5 (lower is better)
Translates to: WPPSRFERKPEDFLF*CASASWSCVSPNSL
Trigger: GAGTGAATTGGGACTTACACAAGACCAGGAAGCAGAAGCACAGCAAAATAAGAAGTCTTCAGGTTTCCTTTCAAATCTGCTGGGAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000509977.2
ENST00000510362.6
ENST00000682142.1
ENST00000682229.1
ENST00000682564.1
ENST00000682628.1
ENST00000682982.1
ENST00000683045.1
ENST00000683130.1
ENST00000683169.1
ENST00000683414.1
ENST00000683527.1
ENST00000683539.1
ENST00000684456.1
ENST00000684521.1
ENST00000684695.1
CDS CCA 90 bp CCTGGATACGTGTGTGGTAAACAAGTATCACAACAAGTGCCTGTTTaGGCTGAAATTGGGGAGTTAGGTGTCTGTTCCCTGAAACAGAAA +
Preference number: 5 (lower is better)
Translates to: PGYVCGKQVSQQVPV*AEIGELGVCSLKQK
Trigger: TTTCTGTTTCAGGGAACAGACACCTAACTCCCCAATTTCAGCCCAAACAGGCACTTGTTGTGATACTTGTTTACCACACACGTATCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS TCA 90 bp CTTTGCTTGGTCTGTGACCACTGTCCAACTGTTCCTTCTTTCTCTTaGGCTCAGTGGGCAAACCAAGGCTTAATTCATCTTCATCATTTG +
Preference number: 5 (lower is better)
Translates to: LCLVCDHCPTVPSFS*AQWANQGLIHLHHL
Trigger: CAAATGATGAAGATGAATTAAGCCTTGGTTTGCCCACTGAGCTCAAGAGAAAGAAGGAACAGTTGGACAGTGGTCACAGACCAAGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000509977.2
ENST00000510362.6
ENST00000682033.1
ENST00000682142.1
ENST00000682229.1
ENST00000682564.1
ENST00000682628.1
ENST00000682982.1
ENST00000683045.1
ENST00000683130.1
ENST00000683169.1
ENST00000683414.1
ENST00000683527.1
ENST00000683539.1
ENST00000684456.1
ENST00000684521.1
ENST00000684695.1
CDS-3UTR CAA 90 bp TCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTAGACACAGATAACTCTTaGGCAGCAACCGTGAGGCTA +
Preference number: 5 (lower is better)
Translates to: SSKTHTVQRFSNTRFPFVDTDNS*AATVRL
Trigger: TAGCCTCACGGTTGCTGCCAAAGAGTTATCTGTGTC...TACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CAA 90 bp GCTTTCTATGGGTTAATACCACCCACTGCAAGACTAGAGATGGCAGTCAATGGATATCCTTCTGAAAGGTaGAAGGTCCCATTATCAGTC +
Preference number: 5 (lower is better)
Translates to: AFYGLIPPTARLEMAVNGYPSER*KVPLSV
Trigger: GACTGATAATGGGACCTTCAACCTTTCAGAAGGATA...TCCATTGACTGCCATCTCTAGTCTTGCAGTGGGTGGTATTAACCCATAGAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CAA 90 bp AAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAACACAGTCATGAGGCATGTTCCTTCTTTCTCTaGAGCTCAGTGGGCAAACCA +
Preference number: 5 (lower is better)
Translates to: KAQAHFVSIKDIKHSHEACSFFL*SSVGKP
Trigger: TGGTTTGCCCACTGAGCTCAAGAGAAAGAAGGAACA...TGCCTCATGACTGTGTTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CAA 90 bp CCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATCCCTCTAACTGGTCTTaGATAGCTGCAGTCACTGCA +
Preference number: 5 (lower is better)
Translates to: PPKPTQFRDFQTPGFHLYPSNWS*IAAVTA
Trigger: TGCAGTGACTGCAGCTATCAAAGACCAGTTAGAGGG...ATACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CAA 90 bp CAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATTAAAAAGCGCCTGCCTCCCTaGAATGAAGCTAGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: QNPHSSEIFKHQVSICIKKRLPP*NEARSW
Trigger: CCAGCTCCTAGCTTCATTCAAGGGAGGCAGGCGCTT...TTTAATACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399793.6
CDS TCA 90 bp ATTCCTAGCTCTTCATTCTATCCACGGGTGGATATTCAAGGAGCTTaGAAGCAACACTGGAATAGACAAGGTCTATTGATGGTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: IPSSSFYPRVDIQGA*KQHWNRQGLLMVLH
Trigger: GTGCAGAACCATCAATAGACCTTGTCTATTCCAGTGTTGCTTTCAAGCTCCTTGAATATCCACCCGTGGATAGAATGAAGAGCTAGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683045.1
ENST00000684695.1
CDS TCA 90 bp TGCAATATGGTGACAGCCATCAAAATTACAAGTGCACATGCCCTCTaGCCCAGCAATTCCACTTCTGGGAAGTTCTCTAAAATACTTGCA +
Preference number: 5 (lower is better)
Translates to: CNMVTAIKITSAHAL*PSNSTSGKFSKILA
Trigger: TGCAAGTATTTTAGAGAACTTCCCAGAAGTGGAATTGCTGGGTCAGAGGGCATGTGCACTTGTAATTTTGATGGCTGTCACCATATTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682808.1
CDS-3UTR CAA 90 bp AGATTTAAGAGATTTTTGGTAGTTGCTGGCATGGTCCCTCGACACTTAAAGTTTACCAGGAGACAAAACTaGCCAGGGCTCTGCTGTTTA +
Preference number: 5 (lower is better)
Translates to: RFKRFLVVAGMVPRHLKFTRRQN*PGLCCL
Trigger: TAAACAGCAGAGCCCTGGCAAGTTTTGTCTCCTGGT...AAACTTTAAGTGTCGAGGGACCATGCCAGCAACTACCAAAAATCTCTTAAATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CAA 90 bp CAGGTTTCCATTTGTATTAAAATGGGCAAGATAATGAAGGCACAGGCTCACTTTCCCTCTAACTGGTCTTaGATAGCTGCAGTCACTGCA +
Preference number: 5 (lower is better)
Translates to: QVSICIKMGKIMKAQAHFPSNWS*IAAVTA
Trigger: TGCAGTGACTGCAGCTATCAAAGACCAGTTAGAGGG...AAAGTGAGCCTGTGCCTTCATTATCTTGCCCATTTTAATACAAATGGAAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CAA 90 bp AAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAACACAGTCATGAGGCAATAACTTCCCAGCTTTaGCCTGGTCCAAAGTCTTCA +
Preference number: 5 (lower is better)
Translates to: KAQAHFVSIKDIKHSHEAITSQL*PGPKSS
Trigger: TGAAGACTTTGGACCAGGCAAAAGCTGGGAAGTTAT...TGCCTCATGACTGTGTTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399793.6
CDS TCA 90 bp ATTATTTGCATAATAACACGCCCAAGTATCATGACGGAAATCAGGTaGTATACTCTCCATGGAGTCAATGCAAGGAACCAGAACAGCAGG +
Preference number: 5 (lower is better)
Translates to: IICIITRPSIMTEIR*YTLHGVNARNQNSR
Trigger: CCTGCTGTTCTGGTTCCTTGCATTGACTCCATGGAGAGTATATCACCTGATTTCCGTCATGATACTTGGGCGTGTTATTATGCAAATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000306320.10
ENST00000682229.1
ENST00000682564.1
ENST00000682828.1
ENST00000682982.1
ENST00000683045.1
ENST00000683527.1
ENST00000683973.1
ENST00000684695.1
CDS TCA 90 bp AATAATTATTTTGAGGACACAGGAGCTAATTTCTGGCACAGAGAGTaGCAACTCCCATTACTCATGCCTGTGGCTATATTACTGCCAGGT +
Preference number: 5 (lower is better)
Translates to: NNYFEDTGANFWHRE*QLPLLMPVAILLPG
Trigger: ACCTGGCAGTAATATAGCCACAGGCATGAGTAATGGGAGTTGTCACTCTCTGTGCCAGAAATTAGCTCCTGTGTCCTCAAAATAATTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683045.1
ENST00000684695.1
CDS TCA 90 bp TGGGGCTTCTCCACAGGTAGGAAATGGAATGAACTAGCTCAAAAATaGGGCCCTTTAGGCTGGCATTCTTTCTATTCTACTACCTTAATT +
Preference number: 5 (lower is better)
Translates to: WGFSTGRKWNELAQK*GPLGWHSFYSTTLI
Trigger: AATTAAGGTAGTAGAATAGAAAGAATGCCAGCCTAAAGGGCCTCATTTTTGAGCTAGTTCATTCCATTTCCTACCTGTGGAGAAGCCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS GCA 90 bp ACAGAGAGTGACAACTCCCATTACTCATGCCTGTGGCTATATTACTaGCAGGTGCAAGAGAACAGAAAACTATTATGTTCCCAGAAACTT +
Preference number: 5 (lower is better)
Translates to: TESDNSHYSCLWLYY*QVQENRKLLCSQKL
Trigger: AAGTTTCTGGGAACATAATAGTTTTCTGTTCTCTTGCACCTGGCAGTAATATAGCCACAGGCATGAGTAATGGGAGTTGTCACTCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683045.1
ENST00000684695.1
CDS CCA 90 bp AGATTTTCAATGCTGACATTCCTAGCTCTTCATTCTATCCACGGGTaGATATTCAAGGAGCTTGAAAGCAACACTGGAATAGACAAGGTC +
Preference number: 5 (lower is better)
Translates to: RFSMLTFLALHSIHG*IFKELESNTGIDKV
Trigger: GACCTTGTCTATTCCAGTGTTGCTTTCAAGCTCCTTGAATATCCACCCGTGGATAGAATGAAGAGCTAGGAATGTCAGCATTGAAAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683045.1
ENST00000684695.1
CDS CCA 90 bp ATCAAGATAGTGAACATGTCTACCAGTAGACATGAAGTTTTCTCATaGTTTTATTCAACCTTCCTTCCAGTCTCCTGCCTCTTCTCCCTG +
Preference number: 5 (lower is better)
Translates to: IKIVNMSTSRHEVFS*FYSTFLPVSCLFSL
Trigger: CAGGGAGAAGAGGCAGGAGACTGGAAGGAAGGTTGAATAAAACCATGAGAAAACTTCATGTCTACTGGTAGACATGTTCACTATCTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000683045.1
ENST00000683169.1
CDS TCA 90 bp CAATGTGAGGCTGAGGATTATCTAGTGTTCGCACACTCACACATCTaGACCTTGCTGATACCAGCTTTTATGGCATATGTTCTTAGTATA +
Preference number: 5 (lower is better)
Translates to: QCEAEDYLVFAHSHI*TLLIPAFMAYVLSI
Trigger: TATACTAAGAACATATGCCATAAAAGCTGGTATCAGCAAGGTTCAGATGTGTGAGTGTGCGAACACTAGATAATCCTCAGCCTCACATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506441.1
ENST00000683045.1
ENST00000684695.1
CDS-3UTR CAA 90 bp TGTATTAAAATGGGCAAGATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACACAGATAACTCTTaGGCAGCAACCGTGAGGCTA +
Preference number: 5 (lower is better)
Translates to: CIKMGKIMKAQAHFVSIKDTDNS*AATVRL
Trigger: TAGCCTCACGGTTGCTGCCAAAGAGTTATCTGTGTC...CTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATCTTGCCCATTTTAATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CAA 90 bp GTATATTCCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATATCCTTCTGAAAGGTaGAAGGTCCCATTATCAGTC +
Preference number: 5 (lower is better)
Translates to: VYSSKTHTVQRFSNTRFPYPSER*KVPLSV
Trigger: GACTGATAATGGGACCTTCAACCTTTCAGAAGGATA...TGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGGAATATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CAA 90 bp ATATCAATCTATCAGTGTCAGCTGATATATATCCAATTAATTCACTGCAGGAGGATTGCGTCTCTTTGCTaGGTCTGTGACCACTGTCCA +
Preference number: 5 (lower is better)
Translates to: ISIYQCQLIYIQLIHCRRIASLC*VCDHCP
Trigger: TGGACAGTGGTCACAGACCAAGCAAAGAGACGCAAT...CCTCCTGCAGTGAATTAATTGGATATATATCAGCTGACACTGATAGATTGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CAA 90 bp GATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAACACAGTCAGGTCTTTCATCTGGTTaGGAATTGATAACTTCCCAG +
Preference number: 5 (lower is better)
Translates to: DNEGTGSLCINKGHQTQSGLSSG*ELITSQ
Trigger: CTGGGAAGTTATCAATTCCAAACCAGATGAAAGACC...TGACTGTGTTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CAA 90 bp TTCAAACACCAGGTTTCCATTTGTATTAAAATGGGCAAGATAATGAAGGCACAGTTCTGCTTCCTGGTCTaGTGTAAGTCCCAATTCACT +
Preference number: 5 (lower is better)
Translates to: FKHQVSICIKMGKIMKAQFCFLV*CKSQFT
Trigger: AGTGAATTGGGACTTACACAAGACCAGGAAGCAGAA...CTGTGCCTTCATTATCTTGCCCATTTTAATACAAATGGAAACCTGGTGTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CAA 90 bp CCTCCAAAACCCACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATAGATTTAAGAGATTTTaGGTAGTTGCTGGCATGGTC +
Preference number: 5 (lower is better)
Translates to: PPKPTQFRDFQTPGFHLYRFKRF*VVAGMV
Trigger: GACCATGCCAGCAACTACCAAAAATCTCTTAAATCT...ATACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTGGGTTTTGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS TCA 90 bp AAGATAAAATGGTTGCAGATAAAATGTATGAGTGGCTTTATGTCCTaGGATTTCCCTGAGGGAGTTCCTGTAGAGGGTGAACATATTACT +
Preference number: 5 (lower is better)
Translates to: KIKWLQIKCMSGFMS*DFPEGVPVEGEHIT
Trigger: AGTAATATGTTCACCCTCTACAGGAACTCCCTCAGGGAAATCTCAGGACATAAAGCCACTCATACATTTTATCTGCAACCATTTTATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS-3UTR CAA 90 bp ACAACTGAATCTGTTTACATCATAACCATTGTCTATGTGATACACAACTGCTTGTTCTGCTTCCTGGTCTaGTGTAAGTCCCAATTCACT +
Preference number: 5 (lower is better)
Translates to: TTESVYIITIVYVIHNCLFCFLV*CKSQFT
Trigger: AGTGAATTGGGACTTACACAAGACCAGGAAGCAGAA...CAAGCAGTTGTGTATCACATAGACAATGGTTATGATGTAAACAGATTCAGTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS-3UTR CAA 90 bp GATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGACATCAAACACAGTCATCATCTGGTTTGGAATaGATAACTTCCCAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: DNEGTGSLCINKGHQTQSSSGLE*ITSQLL
Trigger: CAAAAGCTGGGAAGTTATCAATTCCAAACCAGATGA...TGACTGTGTTTGATGTCCTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399793.6
CDS-3UTR CAA 90 bp CACACAGTTCAGAGATTTTCAAACACCAGGTTTCCATTTGTATTAAAATGGGCATCATCTGGTTTGGAATaGATAACTTCCCAGCTTTCA +
Preference number: 5 (lower is better)
Translates to: HTVQRFSNTRFPFVLKWASSGLE*ITSQLS
Trigger: TGAAAGCTGGGAAGTTATCAATTCCAAACCAGATGA...TGCCCATTTTAATACAAATGGAAACCTGGTGTTTGAAAATCTCTGAACTGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306320.10
CDS-3UTR CAA 90 bp TGTATTAAAATGGGCAAGATAATGAAGGCACAGGCTCACTTTGTATCAATAAAGGGTCTTTCATCTGGTTaGGAATTGATAACTTCCCAG +
Preference number: 5 (lower is better)
Translates to: CIKMGKIMKAQAHFVSIKGLSSG*ELITSQ
Trigger: CTGGGAAGTTATCAATTCCAAACCAGATGAAAGACC...CTTTATTGATACAAAGTGAGCCTGTGCCTTCATTATCTTGCCCATTTTAATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS TCA 90 bp TTAAGGGAGTTTCTAAAAGATACAGGAGGAAGGAATACATACCTCTaGCCAATAACTGATGATGATAAAGAGCAAAGGGGTCTAAATCTA +
Preference number: 5 (lower is better)
Translates to: LREFLKDTGGRNTYL*PITDDDKEQRGLNL
Trigger: TAGATTTAGACCCCTTTGCTCTTTATCATCATCAGTTATTGGTCAGAGGTATGTATTCCTTCCTCCTGTATCTTTTAGAAACTCCCTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000683045.1
ENST00000684695.1
CDS-3UTR CAA 90 bp ATATCAATCTATCAGTGTCAGCTGATATATATCCAATTAATTCACTGCAGGAGGAGATTTAAGAGATTTTaGGTAGTTGCTGGCATGGTC +
Preference number: 5 (lower is better)
Translates to: ISIYQCQLIYIQLIHCRRRFKRF*VVAGMV
Trigger: GACCATGCCAGCAACTACCAAAAATCTCTTAAATCT...CCTCCTGCAGTGAATTAATTGGATATATATCAGCTGACACTGATAGATTGATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306320.10
ENST00000399793.6
CDS CCA 90 bp AACTTTAAGAGAAGATGTTTCTGCTGTTTTGAAACACCAGGTTTGTaGTCATTTATTACAACAGCCACAGAAACAAATGCAGTCTATCAT +
Preference number: 5 (lower is better)
Translates to: NFKRRCFCCFETPGL*SFITTATETNAVYH
Trigger: ATGATAGACTGCATTTGTTTCTGTGGCTGTTGTAATAAATGACCACAAACCTGGTGTTTCAAAACAGCAGAAACATCTTCTCTTAAAGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS GCA 72 bp TCCTCGGCGGCAGGAGCCGGGCATCCCTCCTCGGCGTaGTCCGGAGGCGCCGGGCTCGCCATCTTCAGCTGT +
Preference number: 6 (lower is better)
Translates to: SSAAGAGHPSSA*SGGAGLAIFSC
Trigger: ACAGCTGAAGATGGCGAGCCCGGCGCCTCCGGAGCACGCCGAGGAGGGATGCCCGGCTCCTGCCGCCGAGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000306320.10
ENST00000509048.2
ENST00000682229.1
ENST00000682564.1
ENST00000682808.1
ENST00000682982.1
ENST00000683045.1
ENST00000683527.1
ENST00000683973.1
ENST00000684521.1
ENST00000684695.1
CDS TCA 72 bp CACACCTGGGCTGTGTGCTCCGTGACAGCAGGGGCCTaGCATCACCCTAGCTCCTGGCACCGCAGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: HTWAVCSVTAGA*HHPSSWHRSWL
Trigger: CAGCCAGCTGCGGTGCCAGGAGCTAGGGTGATGTCAGGCCCCTGCTGTCACGGAGCACACAGCCCAGGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682142.1
CDS CAA 90 bp GCCTCGACAGAGGTCTGGTTCCCCACAGGGAGCCCAGCACCCAGGTaGGGCCTCAGCACAGAAAGGGGCTCAACACGGACTGACCCAGGA +
Preference number: 6 (lower is better)
Translates to: ASTEVWFPTGSPAPR*GLSTERGSTRTDPG
Trigger: TCCTGGGTCAGTCCGTGTTGAGCCCCTTTCTGTGCTGAGGCCCAACCTGGGTGCTGGGCTCCCTGTGGGGAACCAGACCTCTGTCGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS TCA 72 bp TGCAGGTGCCTGAGGGTCGGCCGACCACCTCGCATCTaGGGCTGGATCCGCACACGGAGAACGACAACTGCT +
Preference number: 6 (lower is better)
Translates to: CRCLRVGRPPRI*GWIRTRRTTTA
Trigger: AGCAGTTGTCGTTCTCCGTGTGCGGATCCAGCCTCAGATGCGAGGTGGTCGGCCGACCCTCAGGCACCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS CAA 72 bp GAGGTCTGGTTCCCCACAGGGAGCCCAGCACCCAGGTaGGGCCTCAGCACAGAAAGGGGCTCAACACGGACT +
Preference number: 6 (lower is better)
Translates to: EVWFPTGSPAPR*GLSTERGSTRT
Trigger: AGTCCGTGTTGAGCCCCTTTCTGTGCTGAGGCCCAACCTGGGTGCTGGGCTCCCTGTGGGGAACCAGACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS TCA 72 bp TCAAGCACGATGGGAACACCTGTAGGTGCAGGTGCCTaGGGGTCGGCCGACCACCTCGCATCTGAGGCTGGA +
Preference number: 6 (lower is better)
Translates to: SSTMGTPVGAGA*GSADHLASEAG
Trigger: TCCAGCCTCAGATGCGAGGTGGTCGGCCGACCCTCAGGCACCTGCACCTACAGGTGTTCCCATCGTGCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS GCA 72 bp GGCGAAGTTTTCAAGCACGATGGGAACACCTGTAGGTaGAGGTGCCTGAGGGTCGGCCGACCACCTCGCATC +
Preference number: 6 (lower is better)
Translates to: GEVFKHDGNTCR*RCLRVGRPPRI
Trigger: GATGCGAGGTGGTCGGCCGACCCTCAGGCACCTGCACCTACAGGTGTTCCCATCGTGCTTGAAAACTTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS GCA 72 bp TGCCTGTTTTCCACACTGTGCACACCCGGGGGTGGGTaGTGGGCATACTCCACCTGCTTGTTTGCCTCCCGT +
Preference number: 6 (lower is better)
Translates to: CLFSTLCTPGGG*WAYSTCLFASR
Trigger: ACGGGAGGCAAACAAGCAGGTGGAGTATGCCCAGCACCCACCCCCGGGTGTGCACAGTGTGGAAAACAGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS GCA 72 bp TCCGCACACGGAGAACGACAACTGCTCACAGGGACGTaGGTCCGGAGGAAAGTTGCGGTGAGTGTCTACCAG +
Preference number: 6 (lower is better)
Translates to: SAHGERQLLTGT*VRRKVAVSVYQ
Trigger: CTGGTAGACACTCACCGCAACTTTCCTCCGGACGCACGTCCCTGTGAGCAGTTGTCGTTCTCCGTGTGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682808.1
CDS CCA 72 bp GTCTCCCCCACCCCACAGTCCTCTGAACTGACAGCATaGCTAACCCTCGGGAACATTCCAGCAGCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: VSPTPQSSELTA*LTLGNIPAAFS
Trigger: GGAGAAGGCTGCTGGAATGTTCCCGAGGGTTAGCCATGCTGTCAGTTCAGAGGACTGTGGGGTGGGGGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682828.1
CDS TCA 72 bp GTTGGGCCTCAGCACAGAAAGGGGCTCAACACGGACTaGCCCAGGAACACACAAACCCCATGTGGCCCTGAT +
Preference number: 6 (lower is better)
Translates to: VGPQHRKGLNTD*PRNTQTPCGPD
Trigger: ATCAGGGCCACATGGGGTTTGTGTGTTCCTGGGTCAGTCCGTGTTGAGCCCCTTTCTGTGCTGAGGCCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS GCA 72 bp TCCGCACACGGAGAACGACAACTGCTCACAGGGACGTaGGTCCGGAGGAAAGTTGCGGTGAGTGTCAGAACA +
Preference number: 6 (lower is better)
Translates to: SAHGERQLLTGT*VRRKVAVSVRT
Trigger: TGTTCTGACACTCACCGCAACTTTCCTCCGGACGCACGTCCCTGTGAGCAGTTGTCGTTCTCCGTGTGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509048.2
CDS GCA 72 bp TGGGGCTGCAAGAACCAAGACACGTTCAAGCACGTTTaGTCCGGCAAGCTTGGGCGAGCAGGTCAAGACCTC +
Preference number: 6 (lower is better)
Translates to: WGCKNQDTFKHV*SGKLGRAGQDL
Trigger: GAGGTCTTGACCTGCTCGCCCAAGCTTGCCGGAGCAAACGTGCTTGAACGTGTCTTGGTTCTTGCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS GCA 72 bp ACAACTGCTCACAGGGACGTGCGTCCGGAGGAAAGTTaGGGTGAGTGTCTACCAGAACAGCAGGTTGGCAGC +
Preference number: 6 (lower is better)
Translates to: TTAHRDVRPEES*GECLPEQQVGS
Trigger: GCTGCCAACCTGCTGTTCTGGTAGACACTCACCGCAACTTTCCTCCGGACGCACGTCCCTGTGAGCAGTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682808.1
CDS CCA 72 bp CTGTTTTCCACACTGTGCACACCCGGGGGTGGGTGCTaGGCATACTCCACCTGCTTGTTTGCCTCCCGTTTT +
Preference number: 6 (lower is better)
Translates to: LFSTLCTPGGGC*AYSTCLFASRF
Trigger: AAAACGGGAGGCAAACAAGCAGGTGGAGTATGCCCAGCACCCACCCCCGGGTGTGCACAGTGTGGAAAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS CAA 72 bp CTGGGGCTGCAAGAACCAAGACACGTTCAAGCACGTTaGCTCCGGCAAGCTTGGGCGAGCAGGTCAAGACCT +
Preference number: 6 (lower is better)
Translates to: LGLQEPRHVQAR*LRQAWASRSRP
Trigger: AGGTCTTGACCTGCTCGCCCAAGCTTGCCGGAGCAAACGTGCTTGAACGTGTCTTGGTTCTTGCAGCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS CCA 72 bp AATATGCCTGTTTTCCACACTGTGCACACCCGGGGGTaGGTGCTGGGCATACTCCACCTGCTTGTTTGCCTC +
Preference number: 6 (lower is better)
Translates to: NMPVFHTVHTRG*VLGILHLLVCL
Trigger: GAGGCAAACAAGCAGGTGGAGTATGCCCAGCACCCACCCCCGGGTGTGCACAGTGTGGAAAACAGGCATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS CAA 72 bp CCGGGGGTGGGTGCTGGGCATACTCCACCTGCTTGTTaGCCTCCCGTTTTCTCATCAGGGAGTAAACACAGT +
Preference number: 6 (lower is better)
Translates to: PGVGAGHTPPAC*PPVFSSGSKHS
Trigger: ACTGTGTTTACTCCCTGATGAGAAAACGGGAGGCAAACAAGCAGGTGGAGTATGCCCAGCACCCACCCCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS TCA 72 bp AGAGACTCCAGAGGGAATGCAGCCCTGCCAACGCTTTaGTTTGGGCCCAGTGACACTGACTTCGGACTACTG +
Preference number: 6 (lower is better)
Translates to: RDSRGNAALPTL*FGPSDTDFGLL
Trigger: CAGTAGTCCGAAGTCAGTGTCACTGGGCCCAAATCAAAGCGTTGGCAGGGCTGCATTCCCTCTGGAGTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CAA 72 bp ACTCCAGAGGGAATGCAGCCCTGCCAACGCTTTGATTaGGGCCCAGTGACACTGACTTCGGACTACTGTCCT +
Preference number: 6 (lower is better)
Translates to: TPEGMQPCQRFD*GPVTLTSDYCP
Trigger: AGGACAGTAGTCCGAAGTCAGTGTCACTGGGCCCAAATCAAAGCGTTGGCAGGGCTGCATTCCCTCTGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CAA 72 bp GAGCACTGTCATCCGGTGAAGACTGAAAGCCTGTCCTaGGACAACGGCCTGATCTACAGGATTGCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: EHCHPVKTESLS*DNGLIYRIAGR
Trigger: CCTCCCTGCAATCCTGTAGATCAGGCCGTTGTCCAAGGACAGGCTTTCAGTCTTCACCGGATGACAGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CAA 90 bp ATATGCCTGCTGGGGCTGCAAGAACCAAGACACGTTCAAGCACGTTaGCTCCGGCAAGCTTGGGCGAGCAGGTCAAGACCTCAGAGTTTT +
Preference number: 6 (lower is better)
Translates to: ICLLGLQEPRHVQAR*LRQAWASRSRPQSF
Trigger: AAAACTCTGAGGTCTTGACCTGCTCGCCCAAGCTTGCCGGAGCAAACGTGCTTGAACGTGTCTTGGTTCTTGCAGCCCCAGCAGGCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS CAA 90 bp ATCATTCAGGGCCCATCTCAGGTGACTGATGAATGCGGCACCGTTTaGAACGGGTACCTAATCTGGTCCAGATATGCCTGCTGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: IIQGPSQVTDECGTV*NGYLIWSRYACWGC
Trigger: GCAGCCCCAGCAGGCATATCTGGACCAGATTAGGTACCCGTTCAAAACGGTGCCGCATTCATCAGTCACCTGAGATGGGCCCTGAATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS CAA 90 bp TGTGCACACCCGGGGGTGGGTGCTGGGCATACTCCACCTGCTTGTTaGCCTCCCGTTTTCTCATCAGGGAGTAAACACAGTAAACCTAAC +
Preference number: 6 (lower is better)
Translates to: CAHPGVGAGHTPPAC*PPVFSSGSKHSKPN
Trigger: GTTAGGTTTACTGTGTTTACTCCCTGATGAGAAAACGGGAGGCAAACAAGCAGGTGGAGTATGCCCAGCACCCACCCCCGGGTGTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS GCA 72 bp GGGTACCTAATCTGGTCCAGATATGCCTGCTGGGGCTaGAAGAACCAAGACACGTTCAAGCACGTTTGCTCC +
Preference number: 6 (lower is better)
Translates to: GYLIWSRYACWG*KNQDTFKHVCS
Trigger: GGAGCAAACGTGCTTGAACGTGTCTTGGTTCTTGCAGCCCCAGCAGGCATATCTGGACCAGATTAGGTACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS GCA 72 bp GATCCTTCCTTAGAGACTCCAGAGGGAATGCAGCCCTaGCAACGCTTTGATTTGGGCCCAGTGACACTGACT +
Preference number: 6 (lower is better)
Translates to: DPSLETPEGMQP*QRFDLGPVTLT
Trigger: AGTCAGTGTCACTGGGCCCAAATCAAAGCGTTGGCAGGGCTGCATTCCCTCTGGAGTCTCTAAGGAAGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CAA 72 bp GGCCCATCTCAGGTGACTGATGAATGCGGCACCGTTTaGAACGGGTACCTAATCTGGTCCAGATATGCCTGC +
Preference number: 6 (lower is better)
Translates to: GPSQVTDECGTV*NGYLIWSRYAC
Trigger: GCAGGCATATCTGGACCAGATTAGGTACCCGTTCAAAACGGTGCCGCATTCATCAGTCACCTGAGATGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS TCA 72 bp TTGGTCACTGTTCAGAGGAAGGGTGAGACCAGCTGCTaGTTGCGTCTCTTTGCTTGGTCTGTGACCACTGTC +
Preference number: 6 (lower is better)
Translates to: LVTVQRKGETSC*LRLFAWSVTTV
Trigger: GACAGTGGTCACAGACCAAGCAAAGAGACGCAATCAGCAGCTGGTCTCACCCTTCCTCTGAACAGTGACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000509977.2
ENST00000510362.6
ENST00000682033.1
ENST00000682142.1
ENST00000682229.1
ENST00000682564.1
ENST00000682628.1
ENST00000682982.1
ENST00000683045.1
ENST00000683130.1
ENST00000683169.1
ENST00000683414.1
ENST00000683527.1
ENST00000683539.1
ENST00000684456.1
ENST00000684521.1
ENST00000684695.1
CDS TCA 72 bp GCGCTTTTTGGAGAGACAAACCTGTTGCTCAGGGGCTaGGCATTCCCGTGTGTTCTCCCTGTACTTCACCTA +
Preference number: 6 (lower is better)
Translates to: ALFGETNLLLRG*AFPCVLPVLHL
Trigger: TAGGTGAAGTACAGGGAGAACACACGGGAATGCTCAGCCCCTGAGCAACAGGTTTGTCTCTCCAAAAAGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS GCA 72 bp CTTTCTGAAGAGCGCTTTTTGGAGAGACAAACCTGTTaGTCAGGGGCTGAGCATTCCCGTGTGTTCTCCCTG +
Preference number: 6 (lower is better)
Translates to: LSEERFLERQTC*SGAEHSRVFSL
Trigger: CAGGGAGAACACACGGGAATGCTCAGCCCCTGAGCAACAGGTTTGTCTCTCCAAAAAGCGCTCTTCAGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS GCA 72 bp CAGCTGGCTGACATTGGGAGCGCCATAAAGCCCTTTTaGCTGGTCCAAAGTCTTCACCTTCAGGCATTTCTG +
Preference number: 6 (lower is better)
Translates to: QLADIGSAIKPF*LVQSLHLQAFL
Trigger: CAGAAATGCCTGAAGGTGAAGACTTTGGACCAGGCAAAAGGGCTTTATGGCGCTCCCAATGTCAGCCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682142.1
CDS CCA 72 bp CCAAGACACGTTCAAGCACGTTTGCTCCGGCAAGCTTaGGCGAGCAGGTCAAGACCTCAGAGTTTTAGAAAG +
Preference number: 6 (lower is better)
Translates to: PRHVQARLLRQA*ASRSRPQSFRK
Trigger: CTTTCTAAAACTCTGAGGTCTTGACCTGCTCGCCCAAGCTTGCCGGAGCAAACGTGCTTGAACGTGTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS CCA 72 bp GATGAATGCGGCACCGTTTTGAACGGGTACCTAATCTaGTCCAGATATGCCTGCTGGGGCTGCAAGAACCAA +
Preference number: 6 (lower is better)
Translates to: DECGTVLNGYLI*SRYACWGCKNQ
Trigger: TTGGTTCTTGCAGCCCCAGCAGGCATATCTGGACCAGATTAGGTACCCGTTCAAAACGGTGCCGCATTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS CAA 90 bp AACGAAGGAGACAGACATTTCCCTGGCCTTTCTGAAGAGCGCTTTTaGGAGAGACAAACCTGTTGCTCAGGGGCTGAGCATTCCCGTGTG +
Preference number: 6 (lower is better)
Translates to: NEGDRHFPGLSEERF*ERQTCCSGAEHSRV
Trigger: CACACGGGAATGCTCAGCCCCTGAGCAACAGGTTTGTCTCTCCAAAAAGCGCTCTTCAGAAAGGCCAGGGAAATGTCTGTCTCCTTCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS TCA 72 bp TCAGGTGAAAGGTTTGGTCACTGTTCAGAGGAAGGGTaGGACCAGCTGCTGATTGCGTCTCTTTGCTTGGTC +
Preference number: 6 (lower is better)
Translates to: SGERFGHCSEEG*DQLLIASLCLV
Trigger: GACCAAGCAAAGAGACGCAATCAGCAGCTGGTCTCACCCTTCCTCTGAACAGTGACCAAACCTTTCACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000509977.2
ENST00000510362.6
ENST00000682033.1
ENST00000682142.1
ENST00000682229.1
ENST00000682564.1
ENST00000682628.1
ENST00000682982.1
ENST00000683045.1
ENST00000683130.1
ENST00000683169.1
ENST00000683414.1
ENST00000683527.1
ENST00000683539.1
ENST00000684456.1
ENST00000684521.1
ENST00000684695.1
CDS TCA 72 bp CAAGCCCATGAGTCAACAGCGGAAACGATCTGTGTGTaGGGGGCCAGGAGTGAGAAAAAGACAGTTGCAAAG +
Preference number: 6 (lower is better)
Translates to: QAHESTAETICV*GARSEKKTVAK
Trigger: CTTTGCAACTGTCTTTTTCTCACTCCTGGCCCCTCACACACAGATCGTTTCCGCTGTTGACTCATGGGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS GCA 72 bp CACCGTTTTGAACGGGTACCTAATCTGGTCCAGATATaGCTGCTGGGGCTGCAAGAACCAAGACACGTTCAA +
Preference number: 6 (lower is better)
Translates to: HRFERVPNLVQI*LLGLQEPRHVQ
Trigger: TTGAACGTGTCTTGGTTCTTGCAGCCCCAGCAGGCATATCTGGACCAGATTAGGTACCCGTTCAAAACGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS GCA 72 bp CAAATCATTCAGGGCCCATCTCAGGTGACTGATGAATaGGGCACCGTTTTGAACGGGTACCTAATCTGGTCC +
Preference number: 6 (lower is better)
Translates to: QIIQGPSQVTDE*GTVLNGYLIWS
Trigger: GGACCAGATTAGGTACCCGTTCAAAACGGTGCCGCATTCATCAGTCACCTGAGATGGGCCCTGAATGATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS CCA 72 bp TTGAACGGGTACCTAATCTGGTCCAGATATGCCTGCTaGGGCTGCAAGAACCAAGACACGTTCAAGCACGTT +
Preference number: 6 (lower is better)
Translates to: LNGYLIWSRYAC*GCKNQDTFKHV
Trigger: AACGTGCTTGAACGTGTCTTGGTTCTTGCAGCCCCAGCAGGCATATCTGGACCAGATTAGGTACCCGTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS CCA 72 bp CCCTACCCTAGACCTACTGAATCAGAAACTCTGGGCTaGGGCCTAGCAATCTGTCCTTTAATAAGCCCTCCA +
Preference number: 6 (lower is better)
Translates to: PYPRPTESETLG*GLAICPLISPP
Trigger: TGGAGGGCTTATTAAAGGACAGATTGCTAGGCCCCAGCCCAGAGTTTCTGATTCAGTAGGTCTAGGGTAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682982.1
CDS CAA 72 bp GACAGACATTTCCCTGGCCTTTCTGAAGAGCGCTTTTaGGAGAGACAAACCTGTTGCTCAGGGGCTGAGCAT +
Preference number: 6 (lower is better)
Translates to: DRHFPGLSEERF*ERQTCCSGAEH
Trigger: ATGCTCAGCCCCTGAGCAACAGGTTTGTCTCTCCAAAAAGCGCTCTTCAGAAAGGCCAGGGAAATGTCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS TCA 72 bp AGACCAGCTGCTGATTGCGTCTCTTTGCTTGGTCTGTaGCCACTGTCCAACTGTTCCTTCTTTCTCTTGAGC +
Preference number: 6 (lower is better)
Translates to: RPAADCVSLLGL*PLSNCSFFLLS
Trigger: GCTCAAGAGAAAGAAGGAACAGTTGGACAGTGGTCACAGACCAAGCAAAGAGACGCAATCAGCAGCTGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000509977.2
ENST00000510362.6
ENST00000682033.1
ENST00000682142.1
ENST00000682229.1
ENST00000682564.1
ENST00000682628.1
ENST00000682982.1
ENST00000683045.1
ENST00000683130.1
ENST00000683169.1
ENST00000683414.1
ENST00000683527.1
ENST00000683539.1
ENST00000684456.1
ENST00000684521.1
ENST00000684695.1
CDS CCA 72 bp ACAGACATTTCCCTGGCCTTTCTGAAGAGCGCTTTTTaGAGAGACAAACCTGTTGCTCAGGGGCTGAGCATT +
Preference number: 6 (lower is better)
Translates to: TDISLAFLKSAF*RDKPVAQGLSI
Trigger: AATGCTCAGCCCCTGAGCAACAGGTTTGTCTCTCCAAAAAGCGCTCTTCAGAAAGGCCAGGGAAATGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509048.2
ENST00000682808.1
CDS CAA 72 bp CAGTGGCTGAGCCTGGGTCTTTCATCTGGTTTGGAATaGATAACTTCCCAGCGGAAGCATGCACACGAATGT +
Preference number: 6 (lower is better)
Translates to: QWLSLGLSSGLE*ITSQRKHAHEC
Trigger: ACATTCGTGTGCATGCTTCCGCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510362.6
ENST00000683539.1
CDS CAA 72 bp GCAATACAGTGGCTGAGCCTGGGTCTTTCATCTGGTTaGGAATTGATAACTTCCCAGCGGAAGCATGCACAC +
Preference number: 6 (lower is better)
Translates to: AIQWLSLGLSSG*ELITSQRKHAH
Trigger: GTGTGCATGCTTCCGCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTGTATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510362.6
ENST00000683539.1
CDS CAA 72 bp GCAATACAGTGGCTGAGCCTGGGTCTTTCATCTGGTTaGGAATTGATAACTTCCCAGCAGAGCCTATGCCAG +
Preference number: 6 (lower is better)
Translates to: AIQWLSLGLSSG*ELITSQQSLCQ
Trigger: CTGGCATAGGCTCTGCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTGTATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682229.1
CDS CAA 90 bp CGGAAACGATCTGTGTGTGAGGGGCCAGGAGTGAGAAAAAGACAGTaGCAAAGTCTTTCAGCTTTGCCTTTGGCCTTCCACACATGTCTA +
Preference number: 6 (lower is better)
Translates to: RKRSVCEGPGVRKRQ*QSLSALPLAFHTCL
Trigger: TAGACATGTGTGGAAGGCCAAAGGCAAAGCTGAAAGACTTTGCAACTGTCTTTTTCTCACTCCTGGCCCCTCACACACAGATCGTTTCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS TCA 72 bp TTGGTGTTTACAAACTTCCAAAGCGCCTGCCTCCCTTaGATGAAGCTAGGAGCTGGGTTATTATCACTGCCC +
Preference number: 6 (lower is better)
Translates to: LVFTNFQSACLP*MKLGAGLLSLP
Trigger: GGGCAGTGATAATAACCCAGCTCCTAGCTTCATTCAAGGGAGGCAGGCGCTTTGGAAGTTTGTAAACACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399793.6
CDS TCA 72 bp GACATGTCAGCTGGGCGAAGTAGACAGCTACTGTGCTaGAGGCCCTTCTATTTGACGCTTTTATTGACCTCT +
Preference number: 6 (lower is better)
Translates to: DMSAGRSRQLLC*RPFYLTLLLTS
Trigger: AGAGGTCAATAAAAGCGTCAAATAGAAGGGCCTTCAGCACAGTAGCTGTCTACTTCGCCCAGCTGACATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CCA 72 bp TTCTGCAATACAGTGGCTGAGCCTGGGTCTTTCATCTaGTTTGGAATTGATAACTTCCCAGCGGAAGCATGC +
Preference number: 6 (lower is better)
Translates to: FCNTVAEPGSFI*FGIDNFPAEAC
Trigger: GCATGCTTCCGCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTGTATTGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510362.6
ENST00000683539.1
CDS CCA 72 bp CTGTCACTAAAATTCTATTTCAGAGCTACATCTTGGTaGCTCAGTCCCCTCCCTCACCCTCCCTCCATTAAG +
Preference number: 6 (lower is better)
Translates to: LSLKFYFRATSW*LSPLPHPPSIK
Trigger: CTTAATGGAGGGAGGGTGAGGGAGGGGACTGAGCCACCAAGATGTAGCTCTGAAATAGAATTTTAGTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682828.1
CDS CAA 72 bp GTTGGTGTTTACAAACTTCCAAAGCGCCTGCCTCCCTaGAATGAAGCTAGGAGCTGGGTTATTATCACTGCC +
Preference number: 6 (lower is better)
Translates to: VGVYKLPKRLPP*NEARSWVIITA
Trigger: GGCAGTGATAATAACCCAGCTCCTAGCTTCATTCAAGGGAGGCAGGCGCTTTGGAAGTTTGTAAACACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000399793.6
ENST00000684456.1
CDS CAA 72 bp CAGTGGCTGAGCCTGGGTCTTTCATCTGGTTTGGAATaGATAACTTCCCAGCTTTTGCCTGGTCCAAAGTCT +
Preference number: 6 (lower is better)
Translates to: QWLSLGLSSGLE*ITSQLLPGPKS
Trigger: AGACTTTGGACCAGGCAAAAGCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399793.6
ENST00000506441.1
CDS CAA 72 bp GCAATACAGTGGCTGAGCCTGGGTCTTTCATCTGGTTaGGAATTGATAACTTCCCAGCTTTTGCCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: AIQWLSLGLSSG*ELITSQLLPGP
Trigger: TGGACCAGGCAAAAGCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTGTATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399793.6
ENST00000506441.1
CDS CAA 72 bp CAGTGGCTGAGCCTGGGTCTTTCATCTGGTTTGGAATaGATAACTTCCCAGGTGAACACTATGCCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: QWLSLGLSSGLE*ITSQVNTMPPS
Trigger: TGAAGGAGGCATAGTGTTCACCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509977.2
CDS CAA 72 bp GCAATACAGTGGCTGAGCCTGGGTCTTTCATCTGGTTaGGAATTGATAACTTCCCAGCAGAACAGCAGGTTG +
Preference number: 6 (lower is better)
Translates to: AIQWLSLGLSSG*ELITSQQNSRL
Trigger: CAACCTGCTGTTCTGCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTGTATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684521.1
CDS CAA 90 bp GTCCAGGATACCTCTGAGACGTCTGTGTCAGACACAGATAACTCTTaGGCAGCAACCGTGAGGCTAATCTTAGGACAAAGAGCTGAAAAG +
Preference number: 6 (lower is better)
Translates to: VQDTSETSVSDTDNS*AATVRLILGQRAEK
Trigger: CTTTTCAGCTCTTTGTCCTAAGATTAGCCTCACGGTTGCTGCCAAAGAGTTATCTGTGTCTGACACAGACGTCTCAGAGGTATCCTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000509977.2
ENST00000510362.6
ENST00000682142.1
ENST00000682229.1
ENST00000682564.1
ENST00000682628.1
ENST00000682982.1
ENST00000683130.1
ENST00000683169.1
ENST00000683414.1
ENST00000683527.1
ENST00000683539.1
ENST00000684456.1
ENST00000684521.1
ENST00000684695.1
CDS CAA 90 bp AGATCATCAGAAGTGTCTGTCTGTGGAGTGTATCCTTCTGAAAGGTaGAAGGTCCCATTATCAGTCCAGGATACCTCTGAGACGTCTGTG +
Preference number: 6 (lower is better)
Translates to: RSSEVSVCGVYPSER*KVPLSVQDTSETSV
Trigger: CACAGACGTCTCAGAGGTATCCTGGACTGATAATGGGACCTTCAACCTTTCAGAAGGATACACTCCACAGACAGACACTTCTGATGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000509977.2
ENST00000510362.6
ENST00000682142.1
ENST00000682229.1
ENST00000682564.1
ENST00000682628.1
ENST00000682982.1
ENST00000683045.1
ENST00000683130.1
ENST00000683169.1
ENST00000683414.1
ENST00000683527.1
ENST00000683539.1
ENST00000684456.1
ENST00000684521.1
ENST00000684695.1
CDS GCA 72 bp TCTACCTACCCCGCAACAGTATGTGAGAATTCCACTTaGTCTGCATCCCTCCTAATACTTGATGTGGTCAGT +
Preference number: 6 (lower is better)
Translates to: STYPATVCENST*SASLLILDVVS
Trigger: ACTGACCACATCAAGTATTAGGAGGGATGCAGAGCAAGTGGAATTCTCACATACTGTTGCGGGGTAGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683045.1
CDS CCA 72 bp TTCTGCAATACAGTGGCTGAGCCTGGGTCTTTCATCTaGTTTGGAATTGATAACTTCCCAGCTTTTGCCTGG +
Preference number: 6 (lower is better)
Translates to: FCNTVAEPGSFI*FGIDNFPAFAW
Trigger: CCAGGCAAAAGCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTGTATTGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399793.6
ENST00000506441.1
CDS CCA 72 bp TTCTGCAATACAGTGGCTGAGCCTGGGTCTTTCATCTaGTTTGGAATTGATAACTTCCCAGCAGAGCCTATG +
Preference number: 6 (lower is better)
Translates to: FCNTVAEPGSFI*FGIDNFPAEPM
Trigger: CATAGGCTCTGCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTGTATTGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682229.1
CDS CCA 72 bp GGCACAGAGAGTGACAACTCCCATTACTCATGCCTGTaGCTATATTACTGCCAGGTGCAAGAGAACAGAAAA +
Preference number: 6 (lower is better)
Translates to: GTESDNSHYSCL*LYYCQVQENRK
Trigger: TTTTCTGTTCTCTTGCACCTGGCAGTAATATAGCCACAGGCATGAGTAATGGGAGTTGTCACTCTCTGTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683045.1
ENST00000684695.1
CDS CCA 72 bp GTGTGTGGTAAACAAGTATCACAACAAGTGCCTGTTTaGGCTGAAATTGGGGAGTTAGGTGTCTGTTCCCTG +
Preference number: 6 (lower is better)
Translates to: VCGKQVSQQVPV*AEIGELGVCSL
Trigger: CAGGGAACAGACACCTAACTCCCCAATTTCAGCCCAAACAGGCACTTGTTGTGATACTTGTTTACCACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CCA 72 bp TTCTGCAATACAGTGGCTGAGCCTGGGTCTTTCATCTaGTTTGGAATTGATAACTTCCCAGCAGAACAGCAG +
Preference number: 6 (lower is better)
Translates to: FCNTVAEPGSFI*FGIDNFPAEQQ
Trigger: CTGCTGTTCTGCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTGTATTGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684521.1
CDS CAA 72 bp ACCTCTGAGACGTCTGTGTCAGACACAGATAACTCTTaGGCAGCAACCGTGAGGCTAATCTTAGGACAAAGA +
Preference number: 6 (lower is better)
Translates to: TSETSVSDTDNS*AATVRLILGQR
Trigger: TCTTTGTCCTAAGATTAGCCTCACGGTTGCTGCCAAAGAGTTATCTGTGTCTGACACAGACGTCTCAGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000509977.2
ENST00000510362.6
ENST00000682142.1
ENST00000682229.1
ENST00000682564.1
ENST00000682628.1
ENST00000682982.1
ENST00000683130.1
ENST00000683169.1
ENST00000683414.1
ENST00000683527.1
ENST00000683539.1
ENST00000684456.1
ENST00000684521.1
ENST00000684695.1
CDS CAA 72 bp GAAGTGTCTGTCTGTGGAGTGTATCCTTCTGAAAGGTaGAAGGTCCCATTATCAGTCCAGGATACCTCTGAG +
Preference number: 6 (lower is better)
Translates to: EVSVCGVYPSER*KVPLSVQDTSE
Trigger: CTCAGAGGTATCCTGGACTGATAATGGGACCTTCAACCTTTCAGAAGGATACACTCCACAGACAGACACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000509977.2
ENST00000510362.6
ENST00000682142.1
ENST00000682229.1
ENST00000682564.1
ENST00000682628.1
ENST00000682982.1
ENST00000683045.1
ENST00000683130.1
ENST00000683169.1
ENST00000683414.1
ENST00000683527.1
ENST00000683539.1
ENST00000684456.1
ENST00000684521.1
ENST00000684695.1
CDS CAA 72 bp GCAATACAGTGGCTGAGCCTGGGTCTTTCATCTGGTTaGGAATTGATAACTTCCCAGGTGAACACTATGCCT +
Preference number: 6 (lower is better)
Translates to: AIQWLSLGLSSG*ELITSQVNTMP
Trigger: AGGCATAGTGTTCACCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTGTATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509977.2
CDS CAA 72 bp GCAATACAGTGGCTGAGCCTGGGTCTTTCATCTGGTTaGGAATTGATAACTTCCCAGCTCTTACTCCCAGTA +
Preference number: 6 (lower is better)
Translates to: AIQWLSLGLSSG*ELITSQLLLPV
Trigger: TACTGGGAGTAAGAGCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTGTATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682628.1
CDS CAA 90 bp CATGATTCTGCAATACAGTGGCTGAGCCTGGGTCTTTCATCTGGTTaGGAATTGATAACTTCCCAGCTTTTGCCTGGTCCAAAGTCTTCA +
Preference number: 6 (lower is better)
Translates to: HDSAIQWLSLGLSSG*ELITSQLLPGPKSS
Trigger: TGAAGACTTTGGACCAGGCAAAAGCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTGTATTGCAGAATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399793.6
ENST00000506441.1
CDS TCA 72 bp AAGTGTCTGTCTGTGGAGTGTATCCTTCTGAAAGGTTaGAGGTCCCATTATCAGTCCAGGATACCTCTGAGA +
Preference number: 6 (lower is better)
Translates to: KCLSVECILLKG*RSHYQSRIPLR
Trigger: TCTCAGAGGTATCCTGGACTGATAATGGGACCTTCAACCTTTCAGAAGGATACACTCCACAGACAGACACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000509977.2
ENST00000510362.6
ENST00000682142.1
ENST00000682229.1
ENST00000682564.1
ENST00000682628.1
ENST00000682982.1
ENST00000683045.1
ENST00000683130.1
ENST00000683169.1
ENST00000683414.1
ENST00000683527.1
ENST00000683539.1
ENST00000684456.1
ENST00000684521.1
ENST00000684695.1
CDS TCA 72 bp GTCTGTGACCACTGTCCAACTGTTCCTTCTTTCTCTTaGGCTCAGTGGGCAAACCAAGGCTTAATTCATCTT +
Preference number: 6 (lower is better)
Translates to: VCDHCPTVPSFS*AQWANQGLIHL
Trigger: AAGATGAATTAAGCCTTGGTTTGCCCACTGAGCTCAAGAGAAAGAAGGAACAGTTGGACAGTGGTCACAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000509977.2
ENST00000510362.6
ENST00000682033.1
ENST00000682142.1
ENST00000682229.1
ENST00000682564.1
ENST00000682628.1
ENST00000682982.1
ENST00000683045.1
ENST00000683130.1
ENST00000683169.1
ENST00000683414.1
ENST00000683527.1
ENST00000683539.1
ENST00000684456.1
ENST00000684521.1
ENST00000684695.1
CDS TCA 72 bp CCAGGTGAACACTATGCCTCCTTCAAAGCACCTGTCTaGAGAACATCTGATGGCATGAACTGCTTGACATAT +
Preference number: 6 (lower is better)
Translates to: PGEHYASFKAPV*RTSDGMNCLTY
Trigger: ATATGTCAAGCAGTTCATGCCATCAGATGTTCTTCAGACAGGTGCTTTGAAGGAGGCATAGTGTTCACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509977.2
CDS TCA 72 bp TTCACAGGACAGAGAGGTTCAGATGGTATAGGAGGCTaGCTCATAGCTCACAAAGATACCAAGTCACAATCC +
Preference number: 6 (lower is better)
Translates to: FTGQRGSDGIGG*LIAHKDTKSQS
Trigger: GGATTGTGACTTGGTATCTTTGTGAGCTATGAGTCAGCCTCCTATACCATCTGAACCTCTCTGTCCTGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CAA 72 bp ATTGATAACTTCCCAGCGGAAGCATGCACACGAATGTaGAGTTCACGTGTTCATCTGGGCAAAACGCTTTCT +
Preference number: 6 (lower is better)
Translates to: IDNFPAEACTRM*SSRVHLGKTLS
Trigger: AGAAAGCGTTTTGCCCAGATGAACACGTGAACTCAACATTCGTGTGCATGCTTCCGCTGGGAAGTTATCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510362.6
ENST00000683539.1
CDS TCA 72 bp ATCATCAGAAGTGTCTGTCTGTGGAGTGTATCCTTCTaGAAGGTTGAAGGTCCCATTATCAGTCCAGGATAC +
Preference number: 6 (lower is better)
Translates to: IIRSVCLWSVSF*KVEGPIISPGY
Trigger: GTATCCTGGACTGATAATGGGACCTTCAACCTTTCAGAAGGATACACTCCACAGACAGACACTTCTGATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000509977.2
ENST00000510362.6
ENST00000682142.1
ENST00000682229.1
ENST00000682564.1
ENST00000682628.1
ENST00000682982.1
ENST00000683045.1
ENST00000683130.1
ENST00000683169.1
ENST00000683414.1
ENST00000683527.1
ENST00000683539.1
ENST00000684456.1
ENST00000684521.1
ENST00000684695.1
CDS TCA 72 bp CTCACAAAGATACCAAGTCACAATCCCTGGAATCCATaGTTGTCACTTCAAGTGGAAAAAGGGTCTCTGCTG +
Preference number: 6 (lower is better)
Translates to: LTKIPSHNPWNP*LSLQVEKGSLL
Trigger: CAGCAGAGACCCTTTTTCCACTTGAAGTGACAATCATGGATTCCAGGGATTGTGACTTGGTATCTTTGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CCA 72 bp TTCTGCAATACAGTGGCTGAGCCTGGGTCTTTCATCTaGTTTGGAATTGATAACTTCCCAGGTGAACACTAT +
Preference number: 6 (lower is better)
Translates to: FCNTVAEPGSFI*FGIDNFPGEHY
Trigger: ATAGTGTTCACCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTGTATTGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509977.2
CDS CCA 72 bp GTCCACACGGACCTCCACCAAAAGCATCCCTCCATTTaGGGTGCATTTAGTGAAATTAAATGTCTCTTTGTA +
Preference number: 6 (lower is better)
Translates to: VHTDLHQKHPSI*GAFSEIKCLFV
Trigger: TACAAAGAGACATTTAATTTCACTAAATGCACCCCAAATGGAGGGATGCTTTTGGTGGAGGTCCGTGTGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CAA 72 bp ACCTCTGAGACGTCTGTGTCAGACACAGATAACTCTTaGGCAGCAACCGTGAGGCTAATCTGTGTTAATATA +
Preference number: 6 (lower is better)
Translates to: TSETSVSDTDNS*AATVRLICVNI
Trigger: TATATTAACACAGATTAGCCTCACGGTTGCTGCCAAAGAGTTATCTGTGTCTGACACAGACGTCTCAGAGGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683045.1
CDS CAA 90 bp TCCCCTCCCTTCCAAATCCTCACACATGATTCTCACAAATTCATGTaGCCCAGTATCATAGCAAGATACACAGCACTTCCTAGAATGAGT +
Preference number: 6 (lower is better)
Translates to: SPPFQILTHDSHKFM*PSIIARYTALPRMS
Trigger: ACTCATTCTAGGAAGTGCTGTGTATCTTGCTATGATACTGGGCAACATGAATTTGTGAGAATCATGTGTGAGGATTTGGAAGGGAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682828.1
CDS TCA 72 bp ATAATAACACGCCCAAGTATCATGACGGAAATCAGGTaGTATACTCTCCATGGAGTCAATGCAAGGAACCAG +
Preference number: 6 (lower is better)
Translates to: IITRPSIMTEIR*YTLHGVNARNQ
Trigger: CTGGTTCCTTGCATTGACTCCATGGAGAGTATATCACCTGATTTCCGTCATGATACTTGGGCGTGTTATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000306320.10
ENST00000682229.1
ENST00000682564.1
ENST00000682828.1
ENST00000682982.1
ENST00000683045.1
ENST00000683527.1
ENST00000683973.1
ENST00000684695.1
CDS TCA 72 bp GTGATTTTAACATTCTACCTACCCCGCAACAGTATGTaGGAATTCCACTTGCTCTGCATCCCTCCTAATACT +
Preference number: 6 (lower is better)
Translates to: VILTFYLPRNSM*EFHLLCIPPNT
Trigger: AGTATTAGGAGGGATGCAGAGCAAGTGGAATTCTCACATACTGTTGCGGGGTAGGTAGAATGTTAAAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683045.1
CDS GCA 72 bp ACCTCTTATAAAGCCCTGTGGTATGAGGATGTTTTCTaGCATTTCACAGGACAGAGAGGTTCAGATGGTATA +
Preference number: 6 (lower is better)
Translates to: TSYKALWYEDVF*HFTGQRGSDGI
Trigger: TATACCATCTGAACCTCTCTGTCCTGTGAAATGGCAGAAAACATCCTCATACCACAGGGCTTTATAAGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CCA 72 bp ATGCTGACATTCCTAGCTCTTCATTCTATCCACGGGTaGATATTCAAGGAGCTTGAAAGCAACACTGGAATA +
Preference number: 6 (lower is better)
Translates to: MLTFLALHSIHG*IFKELESNTGI
Trigger: TATTCCAGTGTTGCTTTCAAGCTCCTTGAATATCCACCCGTGGATAGAATGAAGAGCTAGGAATGTCAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683045.1
ENST00000684695.1
CDS CCA 72 bp TTCTGCAATACAGTGGCTGAGCCTGGGTCTTTCATCTaGTTTGGAATTGATAACTTCCCAGGTATATATCAC +
Preference number: 6 (lower is better)
Translates to: FCNTVAEPGSFI*FGIDNFPGIYH
Trigger: GTGATATATACCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTGTATTGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683414.1
CDS CAA 90 bp GTCCAGGATACCTCTGAGACGTCTGTGTCAGACACAGATAACTCTTaGGCAGCAACCGTGAGGCTAATCTGTGTTAATATAAATAAATAC +
Preference number: 6 (lower is better)
Translates to: VQDTSETSVSDTDNS*AATVRLICVNINKY
Trigger: GTATTTATTTATATTAACACAGATTAGCCTCACGGTTGCTGCCAAAGAGTTATCTGTGTCTGACACAGACGTCTCAGAGGTATCCTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683045.1
CDS TCA 72 bp TCTTCATTCTATCCACGGGTGGATATTCAAGGAGCTTaGAAGCAACACTGGAATAGACAAGGTCTATTGATG +
Preference number: 6 (lower is better)
Translates to: SSFYPRVDIQGA*KQHWNRQGLLM
Trigger: CATCAATAGACCTTGTCTATTCCAGTGTTGCTTTCAAGCTCCTTGAATATCCACCCGTGGATAGAATGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683045.1
ENST00000684695.1
CDS TCA 72 bp TCCACAGGTAGGAAATGGAATGAACTAGCTCAAAAATaGGGCCCTTTAGGCTGGCATTCTTTCTATTCTACT +
Preference number: 6 (lower is better)
Translates to: STGRKWNELAQK*GPLGWHSFYST
Trigger: AGTAGAATAGAAAGAATGCCAGCCTAAAGGGCCTCATTTTTGAGCTAGTTCATTCCATTTCCTACCTGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CCA 72 bp AATATGCTGAAATTCATCCATGATTCTGCAATACAGTaGCTGAGCCTGGGTCTTTCATCTGGTTTGGAATTG +
Preference number: 6 (lower is better)
Translates to: NMLKFIHDSAIQ*LSLGLSSGLEL
Trigger: CAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTGTATTGCAGAATCATGGATGAATTTCAGCATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000506441.1
ENST00000509977.2
ENST00000510362.6
ENST00000682142.1
ENST00000682229.1
ENST00000682564.1
ENST00000682628.1
ENST00000682982.1
ENST00000683045.1
ENST00000683414.1
ENST00000683527.1
ENST00000683539.1
ENST00000684521.1
ENST00000684695.1
CDS CCA 72 bp TTAATATTGTCCCTGAAACAGCAAAAGCATCCTCCCTaGGAACTTTTTAGAAATGCAGATTCTCAGGCCCTA +
Preference number: 6 (lower is better)
Translates to: LILSLKQQKHPP*ELFRNADSQAL
Trigger: TAGGGCCTGAGAATCTGCATTTCTAAAAAGTTCCCAGGGAGGATGCTTTTGCTGTTTCAGGGACAATATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682982.1
CDS CAA 72 bp CAGTGGCTGAGCCTGGGTCTTTCATCTGGTTTGGAATaGATAACTTCCCAGGTATATATCACAATTACCTTT +
Preference number: 6 (lower is better)
Translates to: QWLSLGLSSGLE*ITSQVYITITF
Trigger: AAAGGTAATTGTGATATATACCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683414.1
CDS CAA 72 bp GCAATACAGTGGCTGAGCCTGGGTCTTTCATCTGGTTaGGAATTGATAACTTCCCAGGTATATATCACAATT +
Preference number: 6 (lower is better)
Translates to: AIQWLSLGLSSG*ELITSQVYITI
Trigger: AATTGTGATATATACCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTGTATTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683414.1
CDS CAA 90 bp CATGATTCTGCAATACAGTGGCTGAGCCTGGGTCTTTCATCTGGTTaGGAATTGATAACTTCCCAGGTATATATCACAATTACCTTTTGC +
Preference number: 6 (lower is better)
Translates to: HDSAIQWLSLGLSSG*ELITSQVYITITFC
Trigger: GCAAAAGGTAATTGTGATATATACCTGGGAAGTTATCAATTCCAAACCAGATGAAAGACCCAGGCTCAGCCACTGTATTGCAGAATCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683414.1
CDS GCA 72 bp CCAGACAACAGTCCTGGTTTAACTGTGTTTATTCAATaGCATTTCACCATGGGAAAGTTATTAGCCTCTCAT +
Preference number: 6 (lower is better)
Translates to: PDNSPGLTVFIQ*HFTMGKLLASH
Trigger: ATGAGAGGCTAATAACTTTCCCATGGTGAAATGGCATTGAATAAACACAGTTAAACCAGGACTGTTGTCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683045.1
ENST00000683169.1
CDS GCA 72 bp TTGATAACTTCCCAGGTATATATCACAATTACCTTTTaGCTGGTCCAAAGTCTTCACCTTCAGGCATTTCTG +
Preference number: 6 (lower is better)
Translates to: LITSQVYITITF*LVQSLHLQAFL
Trigger: CAGAAATGCCTGAAGGTGAAGACTTTGGACCAGGCAAAAGGTAATTGTGATATATACCTGGGAAGTTATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683414.1
CDS CCA 72 bp ATAGAATATGGTGTATTTGCTGAAATGTGCACTATCTaGAAAGAGACACAGGAAACTAGCAACATTGCTGGC +
Preference number: 6 (lower is better)
Translates to: IEYGVFAEMCTI*KETQETSNIAG
Trigger: GCCAGCAATGTTGCTAGTTTCCTGTGTCTCTTTCCAGATAGTGCACATTTCAGCAAATACACCATATTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682808.1
CDS CCA 72 bp ATCAAAAAGTTTCATAAAATATTCTTCGCAAGAGTGTaGCAAAGCAGGCAGTCATACACATTGCTGGTGGGA +
Preference number: 6 (lower is better)
Translates to: IKKFHKIFFARV*QSRQSYTLLVG
Trigger: TCCCACCAGCAATGTGTATGACTGCCTGCTTTGCCACACTCTTGCGAAGAATATTTTATGAAACTTTTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682808.1
CDS CCA 72 bp TATTTGACGCTTTTATTGACCTCTTATAAAGCCCTGTaGTATGAGGATGTTTTCTGCCATTTCACAGGACAG +
Preference number: 6 (lower is better)
Translates to: YLTLLLTSYKAL*YEDVFCHFTGQ
Trigger: CTGTCCTGTGAAATGGCAGAAAACATCCTCATACCACAGGGCTTTATAAGAGGTCAATAAAAGCGTCAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CAA 72 bp CAGTGGGCAAACCAAGGCTTAATTCATCTTCATCATTaGTTCCCATGCCATTTTCTAGAGATGGAAAATCTG +
Preference number: 6 (lower is better)
Translates to: QWANQGLIHLHH*FPCHFLEMENL
Trigger: CAGATTTTCCATCTCTAGAAAATGGCATGGGAACAAATGATGAAGATGAATTAAGCCTTGGTTTGCCCACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000306320.10
ENST00000399793.6
ENST00000509977.2
ENST00000510362.6
ENST00000682033.1
ENST00000682142.1
ENST00000682229.1
ENST00000682564.1
ENST00000682628.1
ENST00000682982.1
ENST00000683045.1
ENST00000683130.1
ENST00000683169.1
ENST00000683414.1
ENST00000683527.1
ENST00000683539.1
ENST00000684456.1
ENST00000684521.1
ENST00000684695.1
CDS CAA 72 bp TTCCAAATCCTCACACATGATTCTCACAAATTCATGTaGCCCAGTATCATAGCAAGATACACAGCACTTCCT +
Preference number: 6 (lower is better)
Translates to: FQILTHDSHKFM*PSIIARYTALP
Trigger: AGGAAGTGCTGTGTATCTTGCTATGATACTGGGCAACATGAATTTGTGAGAATCATGTGTGAGGATTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682828.1
CDS TCA 72 bp GTGGTACAAGAGGCCCCTCCAAGTATGCAAAAGACTTaGGTCAGATTTGTAATACAGTTAAATTACCCAAAA +
Preference number: 6 (lower is better)
Translates to: VVQEAPPSMQKT*VRFVIQLNYPK
Trigger: TTTTGGGTAATTTAACTGTATTACAAATCTGACTCAAGTCTTTTGCATACTTGGAGGGGCCTCTTGTACCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CAA 72 bp AACATTACTGCCTCAGTAGGAGACAGGTTAAGTAATTaGAGACATCCTTACAATAGAATTCTGAAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: NITASVGDRLSN*RHPYNRILKQL
Trigger: CAGCTGCTTCAGAATTCTATTGTAAGGATGTCTCAAATTACTTAACCTGTCTCCTACTGAGGCAGTAATGTT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682808.1
CDS CAA 72 bp ATTGATAACTTCCCAGGTATATATCACAATTACCTTTaGCCTGGTCCAAAGTCTTCACCTTCAGGCATTTCT +
Preference number: 6 (lower is better)
Translates to: IDNFPGIYHNYL*PGPKSSPSGIS
Trigger: AGAAATGCCTGAAGGTGAAGACTTTGGACCAGGCAAAAGGTAATTGTGATATATACCTGGGAAGTTATCAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683414.1
CDS CAA 72 bp AGTGGTACAAGAGGCCCCTCCAAGTATGCAAAAGACTaGAGTCAGATTTGTAATACAGTTAAATTACCCAAA +
Preference number: 6 (lower is better)
Translates to: SGTRGPSKYAKD*SQICNTVKLPK
Trigger: TTTGGGTAATTTAACTGTATTACAAATCTGACTCAAGTCTTTTGCATACTTGGAGGGGCCTCTTGTACCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CAA 90 bp CAACTGTGCACCTCTTGTTCTAGACAAAACCATATCCTTTATTATTaGCATAATAACACGCCCAAGTATCATGACGGAAATCAGGTGATA +
Preference number: 6 (lower is better)
Translates to: QLCTSCSRQNHILYY*HNNTPKYHDGNQVI
Trigger: TATCACCTGATTTCCGTCATGATACTTGGGCGTGTTATTATGCAAATAATAAAGGATATGGTTTTGTCTAGAACAAGAGGTGCACAGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000306320.10
ENST00000682033.1
ENST00000682229.1
ENST00000682564.1
ENST00000682828.1
ENST00000682982.1
ENST00000683045.1
ENST00000683527.1
ENST00000684695.1
CDS CAA 90 bp AAGCTTGGAAACATTACTGCCTCAGTAGGAGACAGGTTAAGTAATTaGAGACATCCTTACAATAGAATTCTGAAGCAGCTGAAAAAGAAC +
Preference number: 6 (lower is better)
Translates to: KLGNITASVGDRLSN*RHPYNRILKQLKKN
Trigger: GTTCTTTTTCAGCTGCTTCAGAATTCTATTGTAAGGATGTCTCAAATTACTTAACCTGTCTCCTACTGAGGCAGTAATGTTTCCAAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682808.1
CDS CCA 72 bp TCAATGCCTATATTTGCTTCTGTTCAAAGGACTAATTaGCTAATATGCCTACACAAAGATCAGAAATGCAGG +
Preference number: 6 (lower is better)
Translates to: SMPIFASVQRTN*LICLHKDQKCR
Trigger: CCTGCATTTCTGATCTTTGTGTAGGCATATTAGCCAATTAGTCCTTTGAACAGAAGCAAATATAGGCATTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CAA 90 bp CAGAACTTTAAGAGAAGATGTTTCTGCTGTTTTGAAACACCAGGTTaGTGGTCATTTATTACAACAGCCACAGAAACAAATGCAGTCTAT +
Preference number: 6 (lower is better)
Translates to: QNFKRRCFCCFETPG*WSFITTATETNAVY
Trigger: ATAGACTGCATTTGTTTCTGTGGCTGTTGTAATAAATGACCACAAACCTGGTGTTTCAAAACAGCAGAAACATCTTCTCTTAAAGTTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS TCA 72 bp CTACAAAGACAGCACCACCTCAATAAATTATCGTATTaGAAACAGCTAAGTCAATGCCTATATTTGCTTCTG +
Preference number: 6 (lower is better)
Translates to: LQRQHHLNKLSY*KQLSQCLYLLL
Trigger: CAGAAGCAAATATAGGCATTGACTTAGCTGTTTTCAATACGATAATTTATTGAGGTGGTGCTGTCTTTGTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CAA 72 bp AAGAGAAGATGTTTCTGCTGTTTTGAAACACCAGGTTaGTGGTCATTTATTACAACAGCCACAGAAACAAAT +
Preference number: 6 (lower is better)
Translates to: KRRCFCCFETPG*WSFITTATETN
Trigger: ATTTGTTTCTGTGGCTGTTGTAATAAATGACCACAAACCTGGTGTTTCAAAACAGCAGAAACATCTTCTCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683973.1
CDS CAA 72 bp ACCTCTTGTTCTAGACAAAACCATATCCTTTATTATTaGCATAATAACACGCCCAAGTATCATGACGGAAAT +
Preference number: 6 (lower is better)
Translates to: TSCSRQNHILYY*HNNTPKYHDGN
Trigger: ATTTCCGTCATGATACTTGGGCGTGTTATTATGCAAATAATAAAGGATATGGTTTTGTCTAGAACAAGAGGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000306320.10
ENST00000682033.1
ENST00000682229.1
ENST00000682564.1
ENST00000682828.1
ENST00000682982.1
ENST00000683045.1
ENST00000683527.1
ENST00000683973.1
ENST00000684695.1