RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RET (Homo sapiens)

Ensembl gene IDs: ENSG00000165731

Ensembl transcript IDs: ENST00000340058.6, ENST00000355710.8, ENST00000498820.5, ENST00000615310.4, ENST00000615310.5, ENST00000638465.1, ENST00000640619.1, ENST00000671844.1, ENST00000672389.1, ENST00000683007.1, ENST00000683278.1, ENST00000683872.1, ENST00000684216.1

Found 1031 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCATGGAGTCCAGCGAGGGCCGGCGGGCACCGGAAGAGGAGTAGCTaGCCGGGAAGGCCTGGGCGGGCCTCCGGAAGGTCATCTCAGCTG +
Preference number: 1 (lower is better)
Translates to: PWSPARAGGHRKRSS*PGRPGRASGRSSQL
Trigger: CAGCTGAGATGACCTTCCGGAGGCCCGCCCAGGCCTTCCCGGTCAGCTACTCCTCTTCCGGTGCCCGCCGGCCCTCGCTGGACTCCATGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR TCA 90 bp GGGAGCCCAGGCCGCCACACTCCTCACACTCCAGCCGTCTCTTGCTaGCTGCACAGGACAGGGGGCAGCCCGCCTCCTCGGCCACATATG +
Preference number: 1 (lower is better)
Translates to: GSPGRHTPHTPAVSC*LHRTGGSPPPRPHM
Trigger: CATATGTGGCCGAGGAGGCGGGCTGCCCCCTGTCCTGTGCAGTCAGCAAGAGACGGCTGGAGTGTGAGGAGTGTGGCGGCCTGGGCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR GCA 90 bp TGGAGTTGCGGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTaGGGCTCTCGCGGAGGAAGCCCCGCAGGGAGCCGTATTTGGCGT +
Preference number: 1 (lower is better)
Translates to: WSCGCLHCPGSQAPL*GSRGGSPAGSRIWR
Trigger: ACGCCAAATACGGCTCCCTGCGGGGCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCTACCTGGGCAGTGGAGGCAGCCGCAACTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR GCA 90 bp GCAGGCGGAACTGGTGGAAGGTGCCTGGGGGTCGGTTCTCCCGAATaGGGAAGGAGGGCCTTGTCTCTGGGAAGCAGAGCTCCCGGGGCT +
Preference number: 1 (lower is better)
Translates to: AGGTGGRCLGVGSPE*GRRALSLGSRAPGA
Trigger: AGCCCCGGGAGCTCTGCTTCCCAGAGACAAGGCCCTCCTTCCGCATTCGGGAGAACCGACCCCCAGGCACCTTCCACCAGTTCCGCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638465.1
3UTR CCA 90 bp GCCTGGGGGTCGGTTCTCCCGAATGCGGAAGGAGGGCCTTGTCTCTaGGAAGCAGAGCTCCCGGGGCTTGAGGGAGCTGCAGGCTGGAAA +
Preference number: 1 (lower is better)
Translates to: AWGSVLPNAEGGPCL*EAELPGLEGAAGWK
Trigger: TTTCCAGCCTGCAGCTCCCTCAAGCCCCGGGAGCTCTGCTTCCCAGAGACAAGGCCCTCCTTCCGCATTCGGGAGAACCGACCCCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638465.1
3UTR TCA 90 bp GCTGACCGGGAAGGCCTGGGCGGGCCTCCGGAAGGTCATCTCAGCTaGGGAGATGGGTGGCTTGTGGGCAAACTTGTGGTAGCAGTGGAT +
Preference number: 1 (lower is better)
Translates to: ADREGLGGPPEGHLS*GDGWLVGKLVVAVD
Trigger: ATCCACTGCTACCACAAGTTTGCCCACAAGCCACCCATCTCCTCAGCTGAGATGACCTTCCGGAGGCCCGCCCAGGCCTTCCCGGTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR GCA 90 bp GGCAGACAGCAGCACCGAGACGATGAAGGAGAAGAGGACAGCGGCTaGGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGAT +
Preference number: 1 (lower is better)
Translates to: GRQQHRDDEGEEDSG*DHRAAQLVAQWILD
Trigger: ATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCTGCTGTCTGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR CCA 90 bp AGGCGGTACATCTCCTCGCTGCAGTTGTCTGGCCTCTCCATCCGGTaGCCGGTCTTCAGAAGGTTGAAGAGCCGCTCAGGAGGAATCCCA +
Preference number: 1 (lower is better)
Translates to: RRYISSLQLSGLSIR*PVFRRLKSRSGGIP
Trigger: TGGGATTCCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCGGCCACCGGATGGAGAGGCCAGACAACTGCAGCGAGGAGATGTACCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
3UTR CCA 90 bp TGTCTCTGGGAAGCAGAGCTCCCGGGGCTTGAGGGAGCTGCAGGCTaGAAAGGAGGTGTTGAAGAAGGAGAAGTATACGCGGGCACAGCC +
Preference number: 1 (lower is better)
Translates to: CLWEAELPGLEGAAG*KGGVEEGEVYAGTA
Trigger: GGCTGTGCCCGCGTATACTTCTCCTTCTTCAACACCTCCTTTCCAGCCTGCAGCTCCCTCAAGCCCCGGGAGCTCTGCTTCCCAGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638465.1
3UTR TCA 90 bp TGCAGTTGTCTGGCCTCTCCATCCGGTGGCCGGTCTTCAGAAGGTTaGAGAGCCGCTCAGGAGGAATCCCAGGATAGGGGTTTCCCCCTA +
Preference number: 1 (lower is better)
Translates to: CSCLASPSGGRSSEG*RAAQEESQDRGFPL
Trigger: TAGGGGGAAACCCCTATCCTGGGATTCCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCGGCCACCGGATGGAGAGGCCAGACAACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
3UTR GCA 90 bp AGTGAGTACAAGCCCTACCTGCTCCTAACAGGTAGGATGAGCCACTaGTTTCGCCTCTACTTGGCTGTGGGGTGTGCTGCAGGCTGGTGG +
Preference number: 1 (lower is better)
Translates to: SEYKPYLLLTGRMSH*FRLYLAVGCAAGWW
Trigger: CCACCAGCCTGCAGCACACCCCACAGCCAAGTAGAGGCGAAAGCAGTGGCTCATCCTACCTGTTAGGAGCAGGTAGGGCTTGTACTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR GCA 90 bp AGGTCTTTGCTGATGTCCGCAAACACCGGCCTTTTGTCCGGCTCCTaGTTCCAGCATTGCAGCATCAGGCGGTACATCTCCTCGCTGCAG +
Preference number: 1 (lower is better)
Translates to: RSLLMSANTGLLSGS*FQHCSIRRYISSLQ
Trigger: CTGCAGCGAGGAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAGGCCGGTGTTTGCGGACATCAGCAAAGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
3UTR CCA 90 bp CACTGCTTTCGCCTCTACTTGGCTGTGGGGTGTGCTGCAGGCTGGTaGCAGGTGGGATTCACAGCAGCAAAGCCTCTGCTGTCAGCAATT +
Preference number: 1 (lower is better)
Translates to: HCFRLYLAVGCAAGW*QVGFTAAKPLLSAI
Trigger: AATTGCTGACAGCAGAGGCTTTGCTGCTGTGAATCCCACCTGCCACCAGCCTGCAGCACACCCCACAGCCAAGTAGAGGCGAAAGCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR CCA 90 bp GGGCCATCCTGGCTGCAGGCCCCATACAATTTGATGACATGTGGGTaGTTGACCTGCTTCAGGACGTTGAACTCTGACAGCAGGTCTCGC +
Preference number: 1 (lower is better)
Translates to: GPSWLQAPYNLMTCG*LTCFRTLNSDSRSR
Trigger: GCGAGACCTGCTGTCAGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACATGTCATCAAATTGTATGGGGCCTGCAGCCAGGATGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR TCA 90 bp TTTGATGACATGTGGGTGGTTGACCTGCTTCAGGACGTTGAACTCTaGCAGCAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAG +
Preference number: 1 (lower is better)
Translates to: FDDMWVVDLLQDVEL*QQVSQLTRGGVLFQ
Trigger: CTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTGCTGTCAGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACATGTCATCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR GCA 90 bp TGGCTGCAGGCCCCATACAATTTGATGACATGTGGGTGGTTGACCTaGTTCAGGACGTTGAACTCTGACAGCAGGTCTCGCAGCTCACTC +
Preference number: 1 (lower is better)
Translates to: WLQAPYNLMTCGWLT*FRTLNSDSRSRSSL
Trigger: GAGTGAGCTGCGAGACCTGCTGTCAGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACATGTCATCAAATTGTATGGGGCCTGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR CCA 90 bp GGCAGGTGGGATTCACAGCAGCAAAGCCTCTGCTGTCAGCAATTCTaGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGG +
Preference number: 1 (lower is better)
Translates to: GRWDSQQQSLCCQQF*DSNSPLSSYCSHQG
Trigger: CCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGAATTGCTGACAGCAGAGGCTTTGCTGCTGTGAATCCCACCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR TCA 90 bp ACACGTGAGGATGATGTGGTGGGCCCGGGGGACAAATGTGTCTTGTaGGCCCTCTTCCCTGATACCACCATCCACATAGTAAAGATGGCA +
Preference number: 1 (lower is better)
Translates to: TREDDVVGPGDKCVL*ALFPDTTIHIVKMA
Trigger: TGCCATCTTTACTATGTGGATGGTGGTATCAGGGAAGAGGGCTCACAAGACACATTTGTCCCCCGGGCCCACCACATCATCCTCACGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR GCA 90 bp GTGCTGACAACACAGCCAGAAGAGCTGCTGAGACTTCCCAAAAGCTaGCCCCACAAGACTGGAGGAGTGTTGTGCATCTGTGACCACAAA +
Preference number: 1 (lower is better)
Translates to: VLTTQPEELLRLPKS*PHKTGGVLCICDHK
Trigger: TTTGTGGTCACAGATGCACAACACTCCTCCAGTCTTGTGGGGGCAGCTTTTGGGAAGTCTCAGCAGCTCTTCTGGCTGTGTTGTCAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR CCA 90 bp CACCAGGTAGTAAGTGTTGGACCCACACATGTGAACACAGAATGTTaGTGGTCACTGATGGACACAGACCAACACTGGGTGCTGCTGGGC +
Preference number: 1 (lower is better)
Translates to: HQVVSVGPTHVNTEC*WSLMDTDQHWVLLG
Trigger: GCCCAGCAGCACCCAGTGTTGGTCTGTGTCCATCAGTGACCACCAACATTCTGTGTTCACATGTGTGGGTCCAACACTTACTACCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR TCA 90 bp TGTGGTGGGCCCGGGGGACAAATGTGTCTTGTGAGCCCTCTTCCCTaGTACCACCATCCACATAGTAAAGATGGCATGGAATCTCTCCAT +
Preference number: 1 (lower is better)
Translates to: CGGPGGQMCLVSPLP*YHHPHSKDGMESLH
Trigger: ATGGAGAGATTCCATGCCATCTTTACTATGTGGATGGTGGTATCAGGGAAGAGGGCTCACAAGACACATTTGTCCCCCGGGCCCACCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR CCA 90 bp TGGGGGAACCTGGCTGTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTaGCTCCTTTCTCAACTGAATACCTCCCCAGATTTGTATATTTAT +
Preference number: 1 (lower is better)
Translates to: WGNLAVLPVQAEWCW*LLSQLNTSPDLYIY
Trigger: ATAAATATACAAATCTGGGGAGGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCACAGCCAGGTTCCCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR CCA 90 bp CAGGTAGTAAGTGTTGGACCCACACATGTGAACACAGAATGTTGGTaGTCACTGATGGACACAGACCAACACTGGGTGCTGCTGGGCACT +
Preference number: 1 (lower is better)
Translates to: QVVSVGPTHVNTECW*SLMDTDQHWVLLGT
Trigger: AGTGCCCAGCAGCACCCAGTGTTGGTCTGTGTCCATCAGTGACCACCAACATTCTGTGTTCACATGTGTGGGTCCAACACTTACTACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR TCA 90 bp CCCCATCACTGGGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTaGGAACAAACCTGTTGCAGCAATTCACACTTACTGTGTAGGCAT +
Preference number: 1 (lower is better)
Translates to: PHHWVSCLDLEFLPS*EQTCCSNSHLLCRH
Trigger: ATGCCTACACAGTAAGTGTGAATTGCTGCAACAGGTTTGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACCCAGTGATGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR GCA 90 bp GTTACGTGTCCAATAAGCATTTTTCAAACTCTCCCTCTGGGTGTGTaGGCACACACCACAAGGCTCTATTACACACGCATCCAAGCCTTG +
Preference number: 1 (lower is better)
Translates to: VTCPISIFQTLPLGV*AHTTRLYYTRIQAL
Trigger: CAAGGCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTTGAAAAATGCTTATTGGACACGTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR TCA 90 bp CCTGGCCCCTGGCAGGCATGCAAGAGGTACTTCTGGAATATTGAATaGACTGATGGCATGAAGGTGAAGAATAAACCAGATGGCTTGTGT +
Preference number: 1 (lower is better)
Translates to: PGPWQACKRYFWNIE*TDGMKVKNKPDGLC
Trigger: ACACAAGCCATCTGGTTTATTCTTCACCTTCATGCCATCAGTTCATTCAATATTCCAGAAGTACCTCTTGCATGCCTGCCAGGGGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638465.1
3UTR GCA 90 bp CTGAGACTTCCCAAAAGCTGCCCCCACAAGACTGGAGGAGTGTTGTaGATCTGTGACCACAAACAAGCAATGAAGAATGACAAGAAGCTT +
Preference number: 1 (lower is better)
Translates to: LRLPKSCPHKTGGVL*ICDHKQAMKNDKKL
Trigger: AAGCTTCTTGTCATTCTTCATTGCTTGTTTGTGGTCACAGATGCACAACACTCCTCCAGTCTTGTGGGGGCAGCTTTTGGGAAGTCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR TCA 90 bp TGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTaGATACCTCCCCAGATTTGTATATTTATCCACTTAGTTAAAGTA +
Preference number: 1 (lower is better)
Translates to: CSQCRLSGAGGSFLN*IPPQICIFIHLVKV
Trigger: TACTTTAACTAAGTGGATAAATATACAAATCTGGGGAGGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR CCA 90 bp AATCCAACAGTTCAGGTCCAATTTCATACACCAGGTAGTAAGTGTTaGACCCACACATGTGAACACAGAATGTTGGTGGTCACTGATGGA +
Preference number: 1 (lower is better)
Translates to: NPTVQVQFHTPGSKC*THTCEHRMLVVTDG
Trigger: TCCATCAGTGACCACCAACATTCTGTGTTCACATGTGTGGGTCCAACACTTACTACCTGGTGTATGAAATTGGACCTGAACTGTTGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR TCA 90 bp CAGAAACATCTTGTAGCAGCATTAAATTACAAACACAGGAAGAGCTaGTCCATGGGCCTTTCACACAGGCTCTATAAGAGCCAAACACCA +
Preference number: 1 (lower is better)
Translates to: QKHLVAALNYKHRKS*SMGLSHRLYKSQTP
Trigger: TGGTGTTTGGCTCTTATAGAGCCTGTGTGAAAGGCCCATGGATCAGCTCTTCCTGTGTTTGTAATTTAATGCTGCTACAAGATGTTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR TCA 90 bp GGACTGGGGCTGAGGCTTGGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGGGCTGGGACTGGGGCTaGGGCTTGGCCAGTGGCTGC +
Preference number: 2 (lower is better)
Translates to: GLGLRLGQWLLASAGWPLGWDWG*GLASGC
Trigger: GCAGCCACTGGCCAAGCCTCAGCCCCAGTCCCAGCC...CAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR-3UTR GCA 90 bp GGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGAGAGGCACCTGCCTGCCCGTGGCTGCTCGCCAGTaGCGGGTGGCCTCTGAGAGG +
Preference number: 2 (lower is better)
Translates to: GQWLLASAGWPLRGTCLPVAARQ*RVASER
Trigger: CCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCAC...GGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR-3UTR CCA 90 bp CAGGTAGCCAGGCCCCACTTTGCGGCTCTCGCGGAGGAAGCCCCGCAGGGAGCCACTGGGGCTGAGGCTTaGCCAGTGGCTGCTCGCCAG +
Preference number: 2 (lower is better)
Translates to: QVARPHFAALAEEAPQGATGAEA*PVAARQ
Trigger: CTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGT...GGCTCCCTGCGGGGCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCTACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR CAA 90 bp GTTGGGGAGCCCAGGCCGCCACACTCCTCACACTCCAGCCGTCTCTaGCTGACTGCACAGGACAGGGGGCAGCCCGCCTCCTCGGCCACA +
Preference number: 2 (lower is better)
Translates to: VGEPRPPHSSHSSRL*LTAQDRGQPASSAT
Trigger: TGTGGCCGAGGAGGCGGGCTGCCCCCTGTCCTGTGCAGTCAGCAAGAGACGGCTGGAGTGTGAGGAGTGTGGCGGCCTGGGCTCCCCAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR CAA 90 bp CCCACTTTGCGGCTCTCGCGGAGGAAGCCCCGCAGGGAGCCGTATTaGGCGTACTCCACGATGAGGAGGAGCGGGCCATCCTGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: PTLRLSRRKPRREPY*AYSTMRRSGPSWLQ
Trigger: CTGCAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAGTACGCCAAATACGGCTCCCTGCGGGGCTTCCTCCGCGAGAGCCGCAAAGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp GACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATCTCGCCAGTGCCGGGTaGCCTCTGAGAGGCACCTGC +
Preference number: 2 (lower is better)
Translates to: DSGCDHRAAQLVAQWILDLASAG*PLRGTC
Trigger: GCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAG...ATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR-3UTR TCA 90 bp CTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCCACCGTGGTGTACCCTGCTGTGCCGGGTGGCCTCTaGGAGGCACCTGCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: LGEAFSFSIFTATVVYPAVPGGL*EAPACP
Trigger: TGGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCAC...AGCAGGGTACACCACGGTGGCCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR-3UTR TCA 90 bp TGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCGCGGAGGAAGCCCCGCAGGGCGGTCTTCAGAAGGTTaGAGAGCCGCTCAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: CPGSQAPLCGSRGGSPAGRSSEG*RAAQEE
Trigger: TTCCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCG...CCCTGCGGGGCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCTACCTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp GCAAATGAGATGAGGTCGCCCATGGTGAGGGCCCGCTCATCCGGGTGGTCCAGGCCAGCCGTCTCTTGCTaGCTGCACAGGACAGGGGGC +
Preference number: 2 (lower is better)
Translates to: ANEMRSPMVRARSSGWSRPAVSC*LHRTGG
Trigger: GCCCCCTGTCCTGTGCAGTCAGCAAGAGACGGCTGG...CCTGGACCACCCGGATGAGCGGGCCCTCACCATGGGCGACCTCATCTCATTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp GGACTGGGGCTGAGGCTTGGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGGAAGGTCATCTCAGCTaGGGAGATGGGTGGCTTGTG +
Preference number: 2 (lower is better)
Translates to: GLGLRLGQWLLASAGWPLEGHLS*GDGWLV
Trigger: CACAAGCCACCCATCTCCTCAGCTGAGATGACCTTC...CAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR-3UTR GCA 90 bp GGACTGGGGCTGAGGCTTGGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGGGTACATCTCCTCGCTaGAGTTGTCTGGCCTCTCCA +
Preference number: 2 (lower is better)
Translates to: GLGLRLGQWLLASAGWPLGTSPR*SCLASP
Trigger: TGGAGAGGCCAGACAACTGCAGCGAGGAGATGTACC...CAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR-3UTR GCA 90 bp GACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATGCCTCCACTCACACCTaGCTGTTGGGGAGCCCAGGC +
Preference number: 2 (lower is better)
Translates to: DSGCDHRAAQLVAQWILDASTHT*LLGSPG
Trigger: GCCTGGGCTCCCCAACAGGCAGGTGTGAGTGGAGGC...ATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp TGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCGCGGAGGAAGCCCCGCAGGGCCTTTGCCATCTCCTTaGCTCCACTCACACCTGCCT +
Preference number: 2 (lower is better)
Translates to: CPGSQAPLCGSRGGSPAGPLPSP*LHSHLP
Trigger: AGGCAGGTGTGAGTGGAGGCAAGGAGATGGCAAAGG...CCCTGCGGGGCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCTACCTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp GTTCTCCATGGAGTCCAGCGAGGGCCGGCGGGCACCGGAAGAGGAGTAGCTGACGCAGCACCGAGACGATaGAGGAGAAGAGGACAGCGG +
Preference number: 2 (lower is better)
Translates to: VLHGVQRGPAGTGRGVADAAPRR*RRRGQR
Trigger: CCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCTGC...GTCAGCTACTCCTCTTCCGGTGCCCGCCGGCCCTCGCTGGACTCCATGGAGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp AGCCAGGCCCCACTTTGCGGCTCTCGCGGAGGAAGCCCCGCAGGGAGCCGTATTCAGGACGTTGAACTCTaGCAGCAGGTCTCGCAGCTC +
Preference number: 2 (lower is better)
Translates to: SQAPLCGSRGGSPAGSRIQDVEL*QQVSQL
Trigger: GAGCTGCGAGACCTGCTGTCAGAGTTCAACGTCCTG...AATACGGCTCCCTGCGGGGCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp TGGCCTCTCCATCCGGTGGCCGGTCTTCAGAAGGTTGAAGAGCCGCTCAGGAGGGCCTGCCTAGAGGTCTaGTGGTCGGTGGCCACCACC +
Preference number: 2 (lower is better)
Translates to: WPLHPVAGLQKVEEPLRRACLEV*WSVATT
Trigger: GGTGGTGGCCACCGACCAGCAGACCTCTAGGCAGGC...CCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCGGCCACCGGATGGAGAGGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp GTTCTCCATGGAGTCCAGCGAGGGCCGGCGGGCACCGGAAGAGGAGTAGCTGACTCCACAACATCGCAGTaGCCGTCGGGGCAGGTCTTG +
Preference number: 2 (lower is better)
Translates to: VLHGVQRGPAGTGRGVADSTTSQ*PSGQVL
Trigger: CAAGACCTGCCCCGACGGCCACTGCGATGTTGTGGA...GTCAGCTACTCCTCTTCCGGTGCCCGCCGGCCCTCGCTGGACTCCATGGAGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp ATGAGGTCGCCCATGGTGAGGGCCCGCTCATCCGGGTGGTCCAGGGAGCTGGAGTCGCACAGTGGATCCTaGATGTCTTCGGGCTCGCAG +
Preference number: 2 (lower is better)
Translates to: MRSPMVRARSSGWSRELESHSGS*MSSGSQ
Trigger: CTGCGAGCCCGAAGACATCCAGGATCCACTGTGCGA...CTCCAGCTCCCTGGACCACCCGGATGAGCGGGCCCTCACCATGGGCGACCTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp CTCCACGATGAGGAGGAGCGGGCCATCCTGGCTGCAGGCCCCATACAATTTGATCTGACCGGGAAGGCCTaGGCGGGCCTCCGGAAGGTC +
Preference number: 2 (lower is better)
Translates to: LHDEEERAILAAGPIQFDLTGKA*AGLRKV
Trigger: GACCTTCCGGAGGCCCGCCCAGGCCTTCCCGGTCAG...ATCAAATTGTATGGGGCCTGCAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp TTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCCTCGCTGCCCTGGAGGGGCATTaGCACTACCCCCAGGCCCCC +
Preference number: 2 (lower is better)
Translates to: FVRLLLPALQHQAVHLLAALEGH*HYPQAP
Trigger: GGGGGCCTGGGGGTAGTGTCAATGCCCCTCCAGGGC...AGCGAGGAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR TCA 90 bp CTCCAGGAGCCTGTAGGCCACGCTGATGTTGGGGCACAAGAACTGCACAGGCAGAGAGCTCCCGGGGCTTaGGGGAGCTGCAGGCTGGAA +
Preference number: 2 (lower is better)
Translates to: LQEPVGHADVGAQELHRQRAPGA*GSCRLE
Trigger: TTCCAGCCTGCAGCTCCCTCAAGCCCCGGGAGCTCT...CTGCCTGTGCAGTTCTTGTGCCCCAACATCAGCGTGGCCTACAGGCTCCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000638465.1
3UTR-3UTR TCA 90 bp GGGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGCCCCGGAGGCAGTCCTaGGGGCAAATGTTGATGTCT +
Preference number: 2 (lower is better)
Translates to: GPASSCNLATPDGGHVAGPRRQS*GQMLMS
Trigger: AGACATCAACATTTGCCCTCAGGACTGCCTCCGGGG...CCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR-3UTR GCA 90 bp CTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCCACCGTGGTGTACCCTGCTAGCTGGGCCTGGGCCTaGCTAGAGGTCTGCTGGTCG +
Preference number: 2 (lower is better)
Translates to: LGEAFSFSIFTATVVYPASWAWA*LEVCWS
Trigger: CGACCAGCAGACCTCTAGGCAGGCCCAGGCCCAGCT...AGCAGGGTACACCACGGTGGCCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp TGGCCTCTCCATCCGGTGGCCGGTCTTCAGAAGGTTGAAGAGCCGCTCAGGAGGCGTGTCCCCCAACAATaGTGCCCCGGAGGCAGTCCT +
Preference number: 2 (lower is better)
Translates to: WPLHPVAGLQKVEEPLRRRVPQQ*CPGGSP
Trigger: AGGACTGCCTCCGGGGCAGCATTGTTGGGGGACACG...CCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCGGCCACCGGATGGAGAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp GCAAATGAGATGAGGTCGCCCATGGTGAGGGCCCGCTCATCCGGGTGGTCCAGGGGCCTCTCCATCCGGTaGCCGGTCTTCAGAAGGTTG +
Preference number: 2 (lower is better)
Translates to: ANEMRSPMVRARSSGWSRGLSIR*PVFRRL
Trigger: CAACCTTCTGAAGACCGGCCACCGGATGGAGAGGCC...CCTGGACCACCCGGATGAGCGGGCCCTCACCATGGGCGACCTCATCTCATTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp AGGGAGCCGTATTTGGCGTACTCCACGATGAGGAGGAGCGGGCCATCCTGGCTGCTCGCTGCAGTTGTCTaGCCTCTCCATCCGGTGGCC +
Preference number: 2 (lower is better)
Translates to: REPYLAYSTMRRSGPSWLLAAVV*PLHPVA
Trigger: GGCCACCGGATGGAGAGGCCAGACAACTGCAGCGAG...CAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAGTACGCCAAATACGGCTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp CAGGAGCCTGTAGGCCACGCTGATGTTGGGGCACAAGAACTGCACAGGCAGCAGGGAGGGCCTTGTCTCTaGGAAGCAGAGCTCCCGGGG +
Preference number: 2 (lower is better)
Translates to: QEPVGHADVGAQELHRQQGGPCL*EAELPG
Trigger: CCCCGGGAGCTCTGCTTCCCAGAGACAAGGCCCTCC...CTGCTGCCTGTGCAGTTCTTGTGCCCCAACATCAGCGTGGCCTACAGGCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638465.1
3UTR-3UTR CCA 90 bp CTTGGGTCTCCACAACATCGCAGTGGCCGTCGGGGCAGGTCTTGGTGCTGGGAGTGCCTAGAGGTCTGCTaGTCGGTGGCCACCACCATG +
Preference number: 2 (lower is better)
Translates to: LGSPQHRSGRRGRSWCWECLEVC*SVATTM
Trigger: CATGGTGGTGGCCACCGACCAGCAGACCTCTAGGCA...CTCCCAGCACCAAGACCTGCCCCGACGGCCACTGCGATGTTGTGGAGACCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp CGGCCTTTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCCCAGCCGTCTCTTGCTaGCTGCACAGGACAGGGGGC +
Preference number: 2 (lower is better)
Translates to: RPFVRLLLPALQHQAVHLPAVSC*LHRTGG
Trigger: GCCCCCTGTCCTGTGCAGTCAGCAAGAGACGGCTGG...GAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAGGCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp GGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCCTCGCTGCAGTTGAGCTGGGCCTGGGCCTaGCTAGAGGTCTGCTGGTCG +
Preference number: 2 (lower is better)
Translates to: GSCFQHCSIRRYISSLQLSWAWA*LEVCWS
Trigger: CGACCAGCAGACCTCTAGGCAGGCCCAGGCCCAGCT...CAACTGCAGCGAGGAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp CAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCCACCGGGGCAGGTCTTGGTaGTGGGAGAGCAGGTGGAGA +
Preference number: 2 (lower is better)
Translates to: QVSQLTRGGVLFQHLHGHRGRSW*WESRWR
Trigger: TCTCCACCTGCTCTCCCAGCACCAAGACCTGCCCCG...GTGGCCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp AGCACCGAGACGATGAAGGAGAAGAGGACAGCGGCTGCGATCACCGTGCGGCACGGCCTCTCCATCCGGTaGCCGGTCTTCAGAAGGTTG +
Preference number: 2 (lower is better)
Translates to: STETMKEKRTAAAITVRHGLSIR*PVFRRL
Trigger: CAACCTTCTGAAGACCGGCCACCGGATGGAGAGGCC...GTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp GAGAAGAGGACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGAGGGAGTCAGATGGAGTaGACGCCGCAAGGTCCAAGT +
Preference number: 2 (lower is better)
Translates to: EKRTAAAITVRHSSSHSGGSQME*TPQGPS
Trigger: ACTTGGACCTTGCGGCGTCCACTCCATCTGACTCCC...TCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp AGCACCGAGACGATGAAGGAGAAGAGGACAGCGGCTGCGATCACCGTGCGGCACTCTCCAGGTCTTTGCTaGTGTCCGCAAACACCGGCC +
Preference number: 2 (lower is better)
Translates to: STETMKEKRTAAAITVRHSPGLC*CPQTPA
Trigger: GGCCGGTGTTTGCGGACATCAGCAAAGACCTGGAGA...GTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp GAGAAGAGGACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGACGGTGTCTCCTCCTCTaGGAGGCCGTCGTCATAAAT +
Preference number: 2 (lower is better)
Translates to: EKRTAAAITVRHSSSHSGRCLLL*EAVVIN
Trigger: ATTTATGACGACGGCCTCTCAGAGGAGGAGACACCG...TCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp GAACGAGCTTCATCTCGGCCAGATACTGCATCCCCTGTGAGATCTGCCAGGCAACGGAAGAGGAGTAGCTaGCCGGGAAGGCCTGGGCGG +
Preference number: 2 (lower is better)
Translates to: ERASSRPDTASPVRSARQRKRSS*PGRPGR
Trigger: CCGCCCAGGCCTTCCCGGTCAGCTACTCCTCTTCCG...TTGCCTGGCAGATCTCACAGGGGATGCAGTATCTGGCCGAGATGAAGCTCGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp ACAGCAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGGGGCCAGCCAGCTCCTaGAACCTCGCTACCCCTGAT +
Preference number: 2 (lower is better)
Translates to: TAGLAAHSGRRSLSASSRGPASS*NLATPD
Trigger: ATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC...CCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR-3UTR GCA 90 bp CGGCCTTTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCCGGGGCAGGTCTTGGTaGTGGGAGAGCAGGTGGAGA +
Preference number: 2 (lower is better)
Translates to: RPFVRLLLPALQHQAVHLRGRSW*WESRWR
Trigger: TCTCCACCTGCTCTCCCAGCACCAAGACCTGCCCCG...GAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp AGCCAGGCCCCACTTTGCGGCTCTCGCGGAGGAAGCCCCGCAGGGAGCCGTATTGCTGAGTGGTGCTGGTaGCTCCTTTCTCAACTGAAT +
Preference number: 2 (lower is better)
Translates to: SQAPLCGSRGGSPAGSRIAEWCW*LLSQLN
Trigger: ATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGC...AATACGGCTCCCTGCGGGGCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR-3UTR CCA 90 bp AGGCAGCAGGCGGAACTGGTGGAAGGTGCCTGGGGGTCGGTTCTCCCGAATGCGGAGGGAGCTGCAGGCTaGAAAGGAGGTGTTGAAGAA +
Preference number: 2 (lower is better)
Translates to: RQQAELVEGAWGSVLPNAEGAAG*KGGVEE
Trigger: TTCTTCAACACCTCCTTTCCAGCCTGCAGCTCCCTC...CGCATTCGGGAGAACCGACCCCCAGGCACCTTCCACCAGTTCCGCCTGCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638465.1
3UTR-3UTR CCA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCGAAGTTCGGCACACTTaGGCCGCCGCAGGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTEVRHT*AAAGPW
Trigger: CCAAGGCCCTGCGGCGGCCCAAGTGTGCCGAACTTC...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR-3UTR CCA 90 bp CGGCCTTTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCAGACCTGGTTCTCCATaGAGTCCAGCGAGGGCCGGC +
Preference number: 2 (lower is better)
Translates to: RPFVRLLLPALQHQAVHLRPGSP*SPARAG
Trigger: GCCGGCCCTCGCTGGACTCCATGGAGAACCAGGTCT...GAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp GGACTGGGGCTGAGGCTTGGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGAAAGTAGAAGTACTATaGCTTGATTCCCACCCCAGA +
Preference number: 2 (lower is better)
Translates to: GLGLRLGQWLLASAGWPLKVEVL*LDSHPR
Trigger: TCTGGGGTGGGAATCAAGTCATAGTACTTCTACTTT...CAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR-3UTR GCA 90 bp TCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCCCCTGAGAGTTCCCCTCTGAGAGGCACCTaGCTGCCCAGGAGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: SHPRSALFNLFLVSPESSPLRGT*LPRRGL
Trigger: CAGACCCCTCCTGGGCAGGCAGGTGCCTCTCAGAGG...GGAACTCTCAGGGGAGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR-3UTR GCA 90 bp AGCACCGAGACGATGAAGGAGAAGAGGACAGCGGCTGCGATCACCGTGCGGCACGGTACATCTCCTCGCTaGAGTTGTCTGGCCTCTCCA +
Preference number: 2 (lower is better)
Translates to: STETMKEKRTAAAITVRHGTSPR*SCLASP
Trigger: TGGAGAGGCCAGACAACTGCAGCGAGGAGATGTACC...GTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp TGGCCTCTCCATCCGGTGGCCGGTCTTCAGAAGGTTGAAGAGCCGCTCAGGAGGCCTTTGCCATCTCCTTaGCTCCACTCACACCTGCCT +
Preference number: 2 (lower is better)
Translates to: WPLHPVAGLQKVEEPLRRPLPSP*LHSHLP
Trigger: AGGCAGGTGTGAGTGGAGGCAAGGAGATGGCAAAGG...CCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCGGCCACCGGATGGAGAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp GCAAATGAGATGAGGTCGCCCATGGTGAGGGCCCGCTCATCCGGGTGGTCCAGGTGTGGTAGCAGTGGATaGAGAAGGCAGACAGCAGCA +
Preference number: 2 (lower is better)
Translates to: ANEMRSPMVRARSSGWSRCGSSG*RRQTAA
Trigger: TGCTGCTGTCTGCCTTCTGCATCCACTGCTACCACA...CCTGGACCACCCGGATGAGCGGGCCCTCACCATGGGCGACCTCATCTCATTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp ATGAGGTCGCCCATGGTGAGGGCCCGCTCATCCGGGTGGTCCAGGGAGCTGGAGTATTCAACCTGTTCTTaGTCTCCCCTGAGAGTTCCG +
Preference number: 2 (lower is better)
Translates to: MRSPMVRARSSGWSRELEYSTCS*SPLRVP
Trigger: CGGAACTCTCAGGGGAGACCAAGAACAGGTTGAATA...CTCCAGCTCCCTGGACCACCCGGATGAGCGGGCCCTCACCATGGGCGACCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR-3UTR CCA 90 bp GCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATGTCTTCGAGGTCTGCTGGTCGGTaGCCACCACCATGTAGTGAA +
Preference number: 2 (lower is better)
Translates to: AAITVRHSSSHSGSWMSSRSAGR*PPPCSE
Trigger: TTCACTACATGGTGGTGGCCACCGACCAGCAGACCT...CGAAGACATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp ATGCAGAAGGCAGACAGCAGCACCGAGACGATGAAGGAGAAGAGGACAGCGGCTACAAGCAGCTGGGCCTaGGCCTGCCTAGAGGTCTGC +
Preference number: 2 (lower is better)
Translates to: MQKADSSTETMKEKRTAATSSWA*ACLEVC
Trigger: GCAGACCTCTAGGCAGGCCCAGGCCCAGCTGCTTGT...AGCCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCTGCTGTCTGCCTTCTGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp GCCGTCGTCATAAATCAGGGAGTCAGATGGAGTGGACGCCGCAAGGTCCAAGTACTCACACCTGCCTGTTaGGGAGCCCAGGCCGCCACA +
Preference number: 2 (lower is better)
Translates to: AVVINQGVRWSGRRKVQVLTPAC*GAQAAT
Trigger: TGTGGCGGCCTGGGCTCCCCAACAGGCAGGTGTGAG...TACTTGGACCTTGCGGCGTCCACTCCATCTGACTCCCTGATTTATGACGACGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp TCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCCCCTGAGAGTTCCCGTCGGGGCAGGTCTTaGTGCTGGGAGAGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: SHPRSALFNLFLVSPESSRRGRS*CWESRW
Trigger: CCACCTGCTCTCCCAGCACCAAGACCTGCCCCGACG...GGAACTCTCAGGGGAGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR CAA 90 bp ATGTCTTGGGTCTCCACAACATCGCAGTGGCCGTCGGGGCAGGTCTaGGTGCTGGGAGAGCAGGTGGAGAAGTTCCTGGTGATCCCTTTG +
Preference number: 2 (lower is better)
Translates to: MSWVSTTSQWPSGQV*VLGEQVEKFLVIPL
Trigger: CAAAGGGATCACCAGGAACTTCTCCACCTGCTCTCCCAGCACCAAGACCTGCCCCGACGGCCACTGCGATGTTGTGGAGACCCAAGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR CAA 90 bp AACAATGCTGCCCCGGAGGCAGTCCTGAGGGCAAATGTTGATGTCTaGGGTCTCCACAACATCGCAGTGGCCGTCGGGGCAGGTCTTGGT +
Preference number: 2 (lower is better)
Translates to: NNAAPEAVLRANVDV*GLHNIAVAVGAGLG
Trigger: ACCAAGACCTGCCCCGACGGCCACTGCGATGTTGTGGAGACCCAAGACATCAACATTTGCCCTCAGGACTGCCTCCGGGGCAGCATTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp GGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCCTCGCTGCAGTTGTCTCCAGGTCTTTGCTaGTGTCCGCAAACACCGGCC +
Preference number: 2 (lower is better)
Translates to: GSCFQHCSIRRYISSLQLSPGLC*CPQTPA
Trigger: GGCCGGTGTTTGCGGACATCAGCAAAGACCTGGAGA...CAACTGCAGCGAGGAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp GCAAATGAGATGAGGTCGCCCATGGTGAGGGCCCGCTCATCCGGGTGGTCCAGGTGGAGAAGTTCCTGGTaGTCCCTTTGCCATCTCCTT +
Preference number: 2 (lower is better)
Translates to: ANEMRSPMVRARSSGWSRWRSSW*SLCHLL
Trigger: AAGGAGATGGCAAAGGGATCACCAGGAACTTCTCCA...CCTGGACCACCCGGATGAGCGGGCCCTCACCATGGGCGACCTCATCTCATTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp TCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCCCCTGAGAGTTCCTGGCGTACTCCACGATaGGGAGGAGCGGGCCATCCT +
Preference number: 2 (lower is better)
Translates to: SHPRSALFNLFLVSPESSWRTPR*GGAGHP
Trigger: AGGATGGCCCGCTCCTCCTCATCGTGGAGTACGCCA...GGAACTCTCAGGGGAGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR-3UTR TCA 90 bp GAACGAGCTTCATCTCGGCCAGATACTGCATCCCCTGTGAGATCTGCCAGGCAATGGCGTACTCCACGATaGGGAGGAGCGGGCCATCCT +
Preference number: 2 (lower is better)
Translates to: ERASSRPDTASPVRSARQWRTPR*GGAGHP
Trigger: AGGATGGCCCGCTCCTCCTCATCGTGGAGTACGCCA...TTGCCTGGCAGATCTCACAGGGGATGCAGTATCTGGCCGAGATGAAGCTCGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp TCCCCATCACTGGGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACAGGCTGTGGGGTGTGCTaGAGGCTGGTGGCAGGTGGG +
Preference number: 2 (lower is better)
Translates to: SPSLGQLFRPGVLTLLRTGCGVC*RLVAGG
Trigger: CCCACCTGCCACCAGCCTGCAGCACACCCCACAGCC...TGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACCCAGTGATGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR GCA 90 bp CGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATGTCTTCGGGCTCTTTTGTCCGGCTCCTaGTTCCAGCATTGCAGCATC +
Preference number: 2 (lower is better)
Translates to: RSPCGTARRTVDPGCLRALLSGS*FQHCSI
Trigger: GATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAG...AGCCCGAAGACATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp GGGAATTCCCACTTTGGATCCTCCAGGATCTTGAAGGCATCCACGGAGACCTGGCCGTCTCTTGCTGACTaGACAGGACAGGGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: GNSHFGSSRILKASTETWPSLAD*TGQGAA
Trigger: GGCTGCCCCCTGTCCTGTGCAGTCAGCAAGAGACGG...CCAGGTCTCCGTGGATGCCTTCAAGATCCTGGAGGATCCAAAGTGGGAATTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp GGGAATTCCCACTTTGGATCCTCCAGGATCTTGAAGGCATCCACGGAGACCTGGCGTGTCCCCCAACAATaGTGCCCCGGAGGCAGTCCT +
Preference number: 2 (lower is better)
Translates to: GNSHFGSSRILKASTETWRVPQQ*CPGGSP
Trigger: AGGACTGCCTCCGGGGCAGCATTGTTGGGGGACACG...CCAGGTCTCCGTGGATGCCTTCAAGATCCTGGAGGATCCAAAGTGGGAATTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp CGGCCTTTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCAACGAGTCTGCCACCTaGGAACTGAACACGGCTCGG +
Preference number: 2 (lower is better)
Translates to: RPFVRLLLPALQHQAVHLNESAT*ELNTAR
Trigger: CCGAGCCGTGTTCAGTTCCCAGGTGGCAGACTCGTT...GAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR CCA 90 bp AGATGGCTTGTGTCAAGGGCTCGCAGAGCAAGACCAGCAGTAGCAGGCACTGTGCTGGTGGAAGGTGCCTaGGGGTCGGTTCTCCCGAAT +
Preference number: 2 (lower is better)
Translates to: RWLVSRARRARPAVAGTVLVEGA*GSVLPN
Trigger: ATTCGGGAGAACCGACCCCCAGGCACCTTCCACCAG...CACAGTGCCTGCTACTGCTGGTCTTGCTCTGCGAGCCCTTGACACAAGCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638465.1
3UTR-3UTR CCA 90 bp GCAGAAGGCAGACAGCAGCACCGAGACGATGAAGGAGAAGAGGACAGCGGCTGCAGGTCTGCTGGTCGGTaGCCACCACCATGTAGTGAA +
Preference number: 2 (lower is better)
Translates to: AEGRQQHRDDEGEEDSGCRSAGR*PPPCSE
Trigger: TTCACTACATGGTGGTGGCCACCGACCAGCAGACCT...GCAGCCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCTGCTGTCTGCCTTCTGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp AATCAGGGAGTCAGATGGAGTGGACGCCGCAAGGTCCAAGTAGTCTCTCCTCTTCGTCGGGGCAGGTCTTaGTGCTGGGAGAGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: NQGVRWSGRRKVQVVSPLRRGRS*CWESRW
Trigger: CCACCTGCTCTCCCAGCACCAAGACCTGCCCCGACG...AAGAGGAGAGACTACTTGGACCTTGCGGCGTCCACTCCATCTGACTCCCTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp GGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCCTCGCTGCAGTTGAGCCAGAAGAGCTGCTaGGACTTCCCAAAAGCTGCC +
Preference number: 2 (lower is better)
Translates to: GSCFQHCSIRRYISSLQLSQKSC*DFPKAA
Trigger: GGCAGCTTTTGGGAAGTCTCAGCAGCTCTTCTGGCT...CAACTGCAGCGAGGAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR TCA 90 bp TTGATGTCTTGGGTCTCCACAACATCGCAGTGGCCGTCGGGGCAGGTCTTGGTGCGGTCTTCAGAAGGTTaGAGAGCCGCTCAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: LMSWVSTTSQWPSGQVLVRSSEG*RAAQEE
Trigger: TTCCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCG...CACCAAGACCTGCCCCGACGGCCACTGCGATGTTGTGGAGACCCAAGACATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp CGGCCTTTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCGATCCTCCAGGATCTTaGAGGCATCCACGGAGACCT +
Preference number: 2 (lower is better)
Translates to: RPFVRLLLPALQHQAVHLDPPGS*RHPRRP
Trigger: AGGTCTCCGTGGATGCCTTCAAGATCCTGGAGGATC...GAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp CGGCCTTTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCGATCTGCCAGGCAAATaGGATGAGGTCGCCCATGGT +
Preference number: 2 (lower is better)
Translates to: RPFVRLLLPALQHQAVHLDLPGK*DEVAHG
Trigger: ACCATGGGCGACCTCATCTCATTTGCCTGGCAGATC...GAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp AAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCACTTGGCTGTGGGGTGTaGTGCAGGCTGGTGGCAGGT +
Preference number: 2 (lower is better)
Translates to: KLSLWVCAHTPQGSITHALGCGV*CRLVAG
Trigger: ACCTGCCACCAGCCTGCAGCACACCCCACAGCCAAG...TGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR GCA 90 bp ACGAGCTTCATCTCGGCCAGATACTGCATCCCCTGTGAGATCTGCCAGGCAAATGAAGAGGACAGCGGCTaGGATCACCGTGCGGCACAG +
Preference number: 2 (lower is better)
Translates to: TSFISARYCIPCEICQANEEDSG*DHRAAQ
Trigger: CTGTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTC...ATTTGCCTGGCAGATCTCACAGGGGATGCAGTATCTGGCCGAGATGAAGCTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp TCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCCCCTGAGAGTTCCCTGATGGAGGACATGTaGCTGGGACTGGGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: SHPRSALFNLFLVSPESSLMEDM*LGLGLR
Trigger: CCTCAGCCCCAGTCCCAGCCACATGTCCTCCATCAG...GGAACTCTCAGGGGAGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR-3UTR CCA 90 bp GGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGAGAGGCACCTGCCTGCCCCAAAAGAAGGAGTTTTaGCAAGAACCATATTTACTG +
Preference number: 2 (lower is better)
Translates to: GQWLLASAGWPLRGTCLPQKKEF*QEPYLL
Trigger: CAGTAAATATGGTTCTTGCCAAAACTCCTTCTTTTG...GGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340058.6
3UTR-3UTR CCA 90 bp GCCGTCGTCATAAATCAGGGAGTCAGATGGAGTGGACGCCGCAAGGTCCAAGTAGGCCTCTCCATCCGGTaGCCGGTCTTCAGAAGGTTG +
Preference number: 2 (lower is better)
Translates to: AVVINQGVRWSGRRKVQVGLSIR*PVFRRL
Trigger: CAACCTTCTGAAGACCGGCCACCGGATGGAGAGGCC...TACTTGGACCTTGCGGCGTCCACTCCATCTGACTCCCTGATTTATGACGACGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp CTAGAACAGTACCTGGCCCCTGGCAGGCATGCAAGAGGTACTTCTGGAATATTGGGCAGCAGGCGGAACTaGTGGAAGGTGCCTGGGGGT +
Preference number: 2 (lower is better)
Translates to: LEQYLAPGRHARGTSGILGSRRN*WKVPGG
Trigger: ACCCCCAGGCACCTTCCACCAGTTCCGCCTGCTGCC...CAATATTCCAGAAGTACCTCTTGCATGCCTGCCAGGGGCCAGGTACTGTTCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638465.1
3UTR-3UTR TCA 90 bp GGGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGAAAGTAGAAGTACTATaGCTTGATTCCCACCCCAGA +
Preference number: 2 (lower is better)
Translates to: GPASSCNLATPDGGHVAGKVEVL*LDSHPR
Trigger: TCTGGGGTGGGAATCAAGTCATAGTACTTCTACTTT...CCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR-3UTR TCA 90 bp CCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCACGGCTCGGCCAATGTaGCGTTCACAAAGAAAGGGC +
Preference number: 2 (lower is better)
Translates to: PSGCVRTHHKALLHTHPSTARPM*RSQRKG
Trigger: GCCCTTTCTTTGTGAACGTCACATTGGCCGAGCCGT...GCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR TCA 90 bp TTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCCTCGCTACGGCTCGGCCAATGTaGCGTTCACAAAGAAAGGGC +
Preference number: 2 (lower is better)
Translates to: FVRLLLPALQHQAVHLLATARPM*RSQRKG
Trigger: GCCCTTTCTTTGTGAACGTCACATTGGCCGAGCCGT...AGCGAGGAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR TCA 90 bp AAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCACTGCCACCTGGGAACTaGACACGGCTCGGCCAATGT +
Preference number: 2 (lower is better)
Translates to: KLSLWVCAHTPQGSITHALPPGN*TRLGQC
Trigger: ACATTGGCCGAGCCGTGTTCAGTTCCCAGGTGGCAG...TGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR GCA 90 bp AAACATCTCGGGACAAGCCGAAATCCGAAATCTTCATCTTCCGCCCCTCAGCTACCTCTGAGAGGCACCTaGCTGCCCAGGAGGGGTCTG +
Preference number: 2 (lower is better)
Translates to: KHLGTSRNPKSSSSAPQLPLRGT*LPRRGL
Trigger: CAGACCCCTCCTGGGCAGGCAGGTGCCTCTCAGAGG...TAGCTGAGGGGCGGAAGATGAAGATTTCGGATTTCGGCTTGTCCCGAGATGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR-3UTR GCA 90 bp ATGCAGAAGGCAGACAGCAGCACCGAGACGATGAAGGAGAAGAGGACAGCGGCTCCTCAGGGAAGCAGTTaGAGGTGCCATAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: MQKADSSTETMKEKRTAAPQGSS*RCHSQL
Trigger: AAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGG...AGCCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCTGCTGTCTGCCTTCTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp CTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCGACACAGACCAACACTaGGTGCTGCTGGGCACTGAA +
Preference number: 2 (lower is better)
Translates to: LSLWVCAHTPQGSITHASDTDQH*VLLGTE
Trigger: TTCAGTGCCCAGCAGCACCCAGTGTTGGTCTGTGTC...GGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp AACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATGGGTGTGCTGCAGGCTaGTGGCAGGTGGGATTCACA +
Preference number: 2 (lower is better)
Translates to: NSPSGCVRTHHKALLHTHGCAAG*WQVGFT
Trigger: TGTGAATCCCACCTGCCACCAGCCTGCAGCACACCC...ATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp CCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCCTGCCCCCACAAGACTaGAGGAGTGTTGTGCATCTG +
Preference number: 2 (lower is better)
Translates to: PSGCVRTHHKALLHTHPSLPPQD*RSVVHL
Trigger: CAGATGCACAACACTCCTCCAGTCTTGTGGGGGCAG...GCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp CGGCCTTTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCTCTCAGCTGAGGAGATaGGTGGCTTGTGGGCAAACT +
Preference number: 2 (lower is better)
Translates to: RPFVRLLLPALQHQAVHLSQLRR*VACGQT
Trigger: AGTTTGCCCACAAGCCACCCATCTCCTCAGCTGAGA...GAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR CAA 90 bp CCATCCTGGCTGCAGGCCCCATACAATTTGATGACATGTGGGTGGTaGACCTGCTTCAGGACGTTGAACTCTGACAGCAGGTCTCGCAGC +
Preference number: 2 (lower is better)
Translates to: PSWLQAPYNLMTCGW*TCFRTLNSDSRSRS
Trigger: GCTGCGAGACCTGCTGTCAGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACATGTCATCAAATTGTATGGGGCCTGCAGCCAGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR CAA 90 bp ACGATGAGGAGGAGCGGGCCATCCTGGCTGCAGGCCCCATACAATTaGATGACATGTGGGTGGTTGACCTGCTTCAGGACGTTGAACTCT +
Preference number: 2 (lower is better)
Translates to: TMRRSGPSWLQAPYN*MTCGWLTCFRTLNS
Trigger: AGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACATGTCATCAAATTGTATGGGGCCTGCAGCCAGGATGGCCCGCTCCTCCTCATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp GTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCGTGCCGGGTGGCCTCTaGGAGGCACCTGCCTGCCCA +
Preference number: 2 (lower is better)
Translates to: VLARTIFTVHCKTTAPQTVPGGL*EAPACP
Trigger: TGGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCAC...GGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
3UTR-3UTR GCA 90 bp GGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACAAACCTGTTGCAGCTTGGCTGTGGGGTGTaGTGCAGGCTGGTGGCAGGT +
Preference number: 2 (lower is better)
Translates to: GQLFRPGVLTLLRTNLLQLGCGV*CRLVAG
Trigger: ACCTGCCACCAGCCTGCAGCACACCCCACAGCCAAG...CTGCAACAGGTTTGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR GCA 90 bp GAACGAGCTTCATCTCGGCCAGATACTGCATCCCCTGTGAGATCTGCCAGGCAACCTCAGGGAAGCAGTTaGAGGTGCCATAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: ERASSRPDTASPVRSARQPQGSS*RCHSQL
Trigger: AAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGG...TTGCCTGGCAGATCTCACAGGGGATGCAGTATCTGGCCGAGATGAAGCTCGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp TTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCCTCGCTTGTGGTAGCAGTGGATaGAGAAGGCAGACAGCAGCA +
Preference number: 2 (lower is better)
Translates to: FVRLLLPALQHQAVHLLACGSSG*RRQTAA
Trigger: TGCTGCTGTCTGCCTTCTGCATCCACTGCTACCACA...AGCGAGGAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp CGGCCTTTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCTGTGGGTGGTTGACCTaGTTCAGGACGTTGAACTCT +
Preference number: 2 (lower is better)
Translates to: RPFVRLLLPALQHQAVHLCGWLT*FRTLNS
Trigger: AGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACA...GAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp GGGAATTCCCACTTTGGATCCTCCAGGATCTTGAAGGCATCCACGGAGACCTGGCAGGCTGAGTGGTGCTaGTGGCTCCTTTCTCAACTG +
Preference number: 2 (lower is better)
Translates to: GNSHFGSSRILKASTETWQAEWC*WLLSQL
Trigger: CAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTG...CCAGGTCTCCGTGGATGCCTTCAAGATCCTGGAGGATCCAAAGTGGGAATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR-3UTR CCA 90 bp AACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCAGGCTGGTGGCAGGTaGGATTCACAGCAGCAAAGC +
Preference number: 2 (lower is better)
Translates to: NSPSGCVRTHHKALLHTHQAGGR*DSQQQS
Trigger: GCTTTGCTGCTGTGAATCCCACCTGCCACCAGCCTG...ATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp CCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCGGAAGAGCTGATCCATaGGCCTTTCACACAGGCTCT +
Preference number: 2 (lower is better)
Translates to: PSGCVRTHHKALLHTHPSGRADP*AFHTGS
Trigger: AGAGCCTGTGTGAAAGGCCCATGGATCAGCTCTTCC...GCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp CTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCGGAAGAGCTGATCCATaGGCCTTTCACACAGGCTCT +
Preference number: 2 (lower is better)
Translates to: LSLWVCAHTPQGSITHASGRADP*AFHTGS
Trigger: AGAGCCTGTGTGAAAGGCCCATGGATCAGCTCTTCC...GGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp TTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCCTCGCTATCAGCTCTCGTGAGTaGTACAGGACTCTCTCCAGG +
Preference number: 2 (lower is better)
Translates to: FVRLLLPALQHQAVHLLAISSRE*YRTLSR
Trigger: CCTGGAGAGAGTCCTGTACCACTCACGAGAGCTGAT...AGCGAGGAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR CCA 90 bp AAGGGATTCAATTGCCATCCATTTAACTGGAATCCGACCCTGGCTCCTCTTCACGAAGTTCGGCACACTTaGGCCGCCGCAGGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: KGFNCHPFNWNPTLAPLHEVRHT*AAAGPW
Trigger: CCAAGGCCCTGCGGCGGCCCAAGTGTGCCGAACTTC...GTGAAGAGGAGCCAGGGTCGGATTCCAGTTAAATGGATGGCAATTGAATCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp AGGGAGCCGTATTTGGCGTACTCCACGATGAGGAGGAGCGGGCCATCCTGGCTGCAATTTGATGACATGTaGGTGGTTGACCTGCTTCAG +
Preference number: 2 (lower is better)
Translates to: REPYLAYSTMRRSGPSWLQFDDM*VVDLLQ
Trigger: CTGAAGCAGGTCAACCACCCACATGTCATCAAATTG...CAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAGTACGCCAAATACGGCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp GCTCCTCTTCACGTAGGAATCCTCTTCATAAACATCTCGGGACAAGCCGAAATCGGTGGTCCAGGGAGCTaGAGTTGCGGCTGCCTCCAC +
Preference number: 2 (lower is better)
Translates to: APLHVGILFINISGQAEIGGPGS*SCGCLH
Trigger: GTGGAGGCAGCCGCAACTCCAGCTCCCTGGACCACC...GATTTCGGCTTGTCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR CAA 90 bp ATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACCGGCCTTTaGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATC +
Preference number: 2 (lower is better)
Translates to: IIFSRSLLMSANTGL*SGSCFQHCSIRRYI
Trigger: GATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAGGCCGGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
3UTR CAA 90 bp CCATACAATTTGATGACATGTGGGTGGTTGACCTGCTTCAGGACGTaGAACTCTGACAGCAGGTCTCGCAGCTCACTCGGGGAGGCGTTC +
Preference number: 2 (lower is better)
Translates to: PYNLMTCGWLTCFRT*NSDSRSRSSLGEAF
Trigger: GAACGCCTCCCCGAGTGAGCTGCGAGACCTGCTGTCAGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACATGTCATCAAATTGTATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp ACGAGCTTCATCTCGGCCAGATACTGCATCCCCTGTGAGATCTGCCAGGCAAATCGGTGTCTCCTCCTCTaGGAGGCCGTCGTCATAAAT +
Preference number: 2 (lower is better)
Translates to: TSFISARYCIPCEICQANRCLLL*EAVVIN
Trigger: ATTTATGACGACGGCCTCTCAGAGGAGGAGACACCG...ATTTGCCTGGCAGATCTCACAGGGGATGCAGTATCTGGCCGAGATGAAGCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp TCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCCTTTGCCATCAGCTCTCGTaGGTGGTACAGGACTCTCTC +
Preference number: 2 (lower is better)
Translates to: SGCVRTHHKALLHTHPSLCHQLS*VVQDSL
Trigger: GAGAGAGTCCTGTACCACTCACGAGAGCTGATGGCA...AAGGCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR TCA 90 bp CTTCTCCTCCTCAGGGAAGCAGTTGCAGGTGCCATAGCCAGCTTTAATCCCCCGTGGAGAAGTTCCTGGTaGTCCCTTTGCCATCTCCTT +
Preference number: 2 (lower is better)
Translates to: LLLLREAVAGAIASFNPPWRSSW*SLCHLL
Trigger: AAGGAGATGGCAAAGGGATCACCAGGAACTTCTCCA...CGGGGGATTAAAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGGAGGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp GGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACAAACCTGTTGCAGCTCCCTCTGGGTGTGTaGGCACACACCACAAGGCTC +
Preference number: 2 (lower is better)
Translates to: GQLFRPGVLTLLRTNLLQLPLGV*AHTTRL
Trigger: GAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAG...CTGCAACAGGTTTGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR GCA 90 bp AACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATGGTACATCTCCTCGCTaGAGTTGTCTGGCCTCTCCA +
Preference number: 2 (lower is better)
Translates to: NSPSGCVRTHHKALLHTHGTSPR*SCLASP
Trigger: TGGAGAGGCCAGACAACTGCAGCGAGGAGATGTACC...ATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR GCA 90 bp GCCGTCGTCATAAATCAGGGAGTCAGATGGAGTGGACGCCGCAAGGTCCAAGTATCCTGCTTCCAGCATTaGAGCATCAGGCGGTACATC +
Preference number: 2 (lower is better)
Translates to: AVVINQGVRWSGRRKVQVSCFQH*SIRRYI
Trigger: GATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGA...TACTTGGACCTTGCGGCGTCCACTCCATCTGACTCCCTGATTTATGACGACGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTGCCTGCCTAGAGGTCTaGTGGTCGGTGGCCACCACC +
Preference number: 2 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSACLEV*WSVATT
Trigger: GGTGGTGGCCACCGACCAGCAGACCTCTAGGCAGGC...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR-3UTR GCA 90 bp ACAGCAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCAGATGGAAGGCCGTTaGCTTGACCACTTTTCCAAA +
Preference number: 2 (lower is better)
Translates to: TAGLAAHSGRRSLSASSRQMEGR*LDHFSK
Trigger: TTTGGAAAAGTGGTCAAGGCAACGGCCTTCCATCTG...CCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp GGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGAGTTCAGAGCAGACTTTaGTTTTGTTCAGACCAGAAA +
Preference number: 2 (lower is better)
Translates to: GQPAPATSLPLMEDMWLGVQSRL*FCSDQK
Trigger: TTTCTGGTCTGAACAAAACCAAAGTCTGCTCTGAAC...TCCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR-3UTR CCA 90 bp GTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCCTCGCCAGTGCCGGGTaGCCTCTGAGAGGCACCTGC +
Preference number: 2 (lower is better)
Translates to: VLARTIFTVHCKTTAPQTLASAG*PLRGTC
Trigger: GCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAG...GGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
3UTR-3UTR CCA 90 bp AACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATGACACAGACCAACACTaGGTGCTGCTGGGCACTGAA +
Preference number: 2 (lower is better)
Translates to: NSPSGCVRTHHKALLHTHDTDQH*VLLGTE
Trigger: TTCAGTGCCCAGCAGCACCCAGTGTTGGTCTGTGTC...ATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp TCCCCATCACTGGGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACAGTGAGGATGATGTGGTaGGCCCGGGGGACAAATGTG +
Preference number: 2 (lower is better)
Translates to: SPSLGQLFRPGVLTLLRTVRMMW*ARGTNV
Trigger: CACATTTGTCCCCCGGGCCCACCACATCATCCTCAC...TGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACCCAGTGATGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp TTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCCTCGCTTGCCATCCATTTAACTaGAATCCGACCCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: FVRLLLPALQHQAVHLLACHPFN*NPTLAP
Trigger: AGGAGCCAGGGTCGGATTCCAGTTAAATGGATGGCA...AGCGAGGAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp ACGAGCTTCATCTCGGCCAGATACTGCATCCCCTGTGAGATCTGCCAGGCAAATGCTCTGCCTTTCAGATaGAAGGCCGTTGCCTTGACC +
Preference number: 2 (lower is better)
Translates to: TSFISARYCIPCEICQANALPFR*KAVALT
Trigger: GGTCAAGGCAACGGCCTTCCATCTGAAAGGCAGAGC...ATTTGCCTGGCAGATCTCACAGGGGATGCAGTATCTGGCCGAGATGAAGCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTGCCCGCTCATCCGGGTaGTCCAGGGAGCTGGAGTTG +
Preference number: 2 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSARSSG*SRELEL
Trigger: CAACTCCAGCTCCCTGGACCACCCGGATGAGCGGGC...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR-3UTR TCA 90 bp TGCTGTCAGCAATTCTGGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCTGCCACCTGGGAACTaGACACGGCTCGGCCAATGT +
Preference number: 2 (lower is better)
Translates to: CCQQFWDSNSPLSSYCSHLPPGN*TRLGQC
Trigger: ACATTGGCCGAGCCGTGTTCAGTTCCCAGGTGGCAG...ATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGAATTGCTGACAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR TCA 90 bp CTTCCCAAAAGCTGCCCCCACAAGACTGGAGGAGTGTTGTGCATCTGTGACCACGACAAATGTGTCTTGTaGGCCCTCTTCCCTGATACC +
Preference number: 2 (lower is better)
Translates to: LPKSCPHKTGGVLCICDHDKCVL*ALFPDT
Trigger: GGTATCAGGGAAGAGGGCTCACAAGACACATTTGTC...GTGGTCACAGATGCACAACACTCCTCCAGTCTTGTGGGGGCAGCTTTTGGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR TCA 90 bp GCCGTCGTCATAAATCAGGGAGTCAGATGGAGTGGACGCCGCAAGGTCCAAGTACCTGAGGGCAAATGTTaGTGTCTTGGGTCTCCACAA +
Preference number: 2 (lower is better)
Translates to: AVVINQGVRWSGRRKVQVPEGKC*CLGSPQ
Trigger: TTGTGGAGACCCAAGACATCAACATTTGCCCTCAGG...TACTTGGACCTTGCGGCGTCCACTCCATCTGACTCCCTGATTTATGACGACGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTGGGCCAGCCAGCTCCTaGAACCTCGCTACCCCTGAT +
Preference number: 2 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSGPASS*NLATPD
Trigger: ATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR-3UTR CCA 90 bp GCTCCTCTTCACGTAGGAATCCTCTTCATAAACATCTCGGGACAAGCCGAAATCCTTCCCCTCCAGCCCTaGAGGGGCATTGACACTACC +
Preference number: 2 (lower is better)
Translates to: APLHVGILFINISGQAEILPLQP*RGIDTT
Trigger: GGTAGTGTCAATGCCCCTCCAGGGCTGGAGGGGAAG...GATTTCGGCTTGTCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR CCA 90 bp GGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTTGCTGTCAGCAATTCTaGGACTCCAACAGCCCCCTT +
Preference number: 2 (lower is better)
Translates to: GLQQPPFFILFSSGVVAACCQQF*DSNSPL
Trigger: AAGGGGGCTGTTGGAGTCCCAGAATTGCTGACAGCA...AGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp TCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACCGGGGGAGTCAGATGGAGTaGACGCCGCAAGGTCCAAGT +
Preference number: 2 (lower is better)
Translates to: SPLNHHLLQVFADVRKHRGSQME*TPQGPS
Trigger: ACTTGGACCTTGCGGCGTCCACTCCATCTGACTCCC...CCGGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp ACAGCAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCAAATGTTGATGTCTTaGGTCTCCACAACATCGCAG +
Preference number: 2 (lower is better)
Translates to: TAGLAAHSGRRSLSASSRQMLMS*VSTTSQ
Trigger: CTGCGATGTTGTGGAGACCCAAGACATCAACATTTG...CCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp CTCCACGATGAGGAGGAGCGGGCCATCCTGGCTGCAGGCCCCATACAATTTGATAGGGAATTCCCACTTTaGATCCTCCAGGATCTTGAA +
Preference number: 2 (lower is better)
Translates to: LHDEEERAILAAGPIQFDREFPL*ILQDLE
Trigger: TTCAAGATCCTGGAGGATCCAAAGTGGGAATTCCCT...ATCAAATTGTATGGGGCCTGCAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR CAA 90 bp ACACCAGGTAGTAAGTGTTGGACCCACACATGTGAACACAGAATGTaGGTGGTCACTGATGGACACAGACCAACACTGGGTGCTGCTGGG +
Preference number: 2 (lower is better)
Translates to: TPGSKCWTHTCEHRM*VVTDGHRPTLGAAG
Trigger: CCCAGCAGCACCCAGTGTTGGTCTGTGTCCATCAGTGACCACCAACATTCTGTGTTCACATGTGTGGGTCCAACACTTACTACCTGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR TCA 90 bp CCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTAGTGAGCCCTCTTCCCTaGTACCACCATCCACATAGT +
Preference number: 2 (lower is better)
Translates to: PTAPFLHTVLIRGSGCSVVSPLP*YHHPHS
Trigger: ACTATGTGGATGGTGGTATCAGGGAAGAGGGCTCAC...TACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR TCA 90 bp TCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCCTTAAACACAGGAAGAGCTaGTCCATGGGCCTTTCACAC +
Preference number: 2 (lower is better)
Translates to: SGCVRTHHKALLHTHPSLKHRKS*SMGLSH
Trigger: GTGTGAAAGGCCCATGGATCAGCTCTTCCTGTGTTT...AAGGCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR TCA 90 bp CCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGAACACGTCGGTCTTCAGAAGGTTaGAGAGCCGCTCAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: PFFILFSSGVVAAQYRTRRSSEG*RAAQEE
Trigger: TTCCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCG...ACGTGTTCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR CCA 90 bp CCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCAACACAGAATGTTGGTaGTCACTGATGGACACAGAC +
Preference number: 2 (lower is better)
Translates to: PSGCVRTHHKALLHTHPSNTECW*SLMDTD
Trigger: GTCTGTGTCCATCAGTGACCACCAACATTCTGTGTT...GCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp CCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCGTGAACACAGAATGTTaGTGGTCACTGATGGACACA +
Preference number: 2 (lower is better)
Translates to: PSGCVRTHHKALLHTHPSVNTEC*WSLMDT
Trigger: TGTGTCCATCAGTGACCACCAACATTCTGTGTTCAC...GCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp CCAAATTCGCCTTCTCCTAGAGTTTTTCCAAGAACCAAGTTCTTCCGAGGGAATACAAGCAGCTGGGCCTaGGCCTGCCTAGAGGTCTGC +
Preference number: 2 (lower is better)
Translates to: PNSPSPRVFPRTKFFRGNTSSWA*ACLEVC
Trigger: GCAGACCTCTAGGCAGGCCCAGGCCCAGCTGCTTGT...ATTCCCTCGGAAGAACTTGGTTCTTGGAAAAACTCTAGGAGAAGGCGAATTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp ACAGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGCAGGACGTTGAACTCTaGCAGCAGGTCTCGCAGCTC +
Preference number: 2 (lower is better)
Translates to: TAPQTMFFQKATAPALALQDVEL*QQVSQL
Trigger: GAGCTGCGAGACCTGCTGTCAGAGTTCAACGTCCTG...CAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR-3UTR GCA 90 bp TCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACCGGGGTAGGATGAGCCACTaGTTTCGCCTCTACTTGGCT +
Preference number: 2 (lower is better)
Translates to: SPLNHHLLQVFADVRKHRGRMSH*FRLYLA
Trigger: AGCCAAGTAGAGGCGAAAGCAGTGGCTCATCCTACC...CCGGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR CCA 90 bp GTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCCTGATGGAGGACATGTaGCTGGGACTGGGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: VLARTIFTVHCKTTAPQTLMEDM*LGLGLR
Trigger: CCTCAGCCCCAGTCCCAGCCACATGTCCTCCATCAG...GGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340058.6
3UTR-3UTR CCA 90 bp GGTGGCAGGTGGGATTCACAGCAGCAAAGCCTCTGCTGTCAGCAATTCTGGGACAGGTGTAGCAGTCCTTaGTCATTGTCATTGCTACTT +
Preference number: 2 (lower is better)
Translates to: GGRWDSQQQSLCCQQFWDRCSSP*SLSLLL
Trigger: AAGTAGCAATGACAATGACCAAGGACTGCTACACCT...GTCCCAGAATTGCTGACAGCAGAGGCTTTGCTGCTGTGAATCCCACCTGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp GAACGAGCTTCATCTCGGCCAGATACTGCATCCCCTGTGAGATCTGCCAGGCAACAAATGTTGATGTCTTaGGTCTCCACAACATCGCAG +
Preference number: 2 (lower is better)
Translates to: ERASSRPDTASPVRSARQQMLMS*VSTTSQ
Trigger: CTGCGATGTTGTGGAGACCCAAGACATCAACATTTG...TTGCCTGGCAGATCTCACAGGGGATGCAGTATCTGGCCGAGATGAAGCTCGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR TCA 90 bp CAGTATTTGAATGAGACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCGCCCTGGAGGGGCATTaGCACTACCCCCAGGCCCCC +
Preference number: 2 (lower is better)
Translates to: QYLNETILSPISALSLKSALEGH*HYPQAP
Trigger: GGGGGCCTGGGGGTAGTGTCAATGCCCCTCCAGGGC...GCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTCTCATTCAAATACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR TCA 90 bp TGCTGTCAGCAATTCTGGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATGTGAGCCCTCTTCCCTaGTACCACCATCCACATAGT +
Preference number: 2 (lower is better)
Translates to: CCQQFWDSNSPLSSYCSHVSPLP*YHHPHS
Trigger: ACTATGTGGATGGTGGTATCAGGGAAGAGGGCTCAC...ATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGAATTGCTGACAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR TCA 90 bp TTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGAACACGTGAGGATGACAAATGTGTCTTGTaGGCCCTCTTCCCTGATACC +
Preference number: 2 (lower is better)
Translates to: FILFSSGVVAAQYRTREDDKCVL*ALFPDT
Trigger: GGTATCAGGGAAGAGGGCTCACAAGACACATTTGTC...ATCCTCACGTGTTCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR TCA 90 bp TCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACCGGCCTGAGGGCAAATGTTaGTGTCTTGGGTCTCCACAA +
Preference number: 2 (lower is better)
Translates to: SPLNHHLLQVFADVRKHRPEGKC*CLGSPQ
Trigger: TTGTGGAGACCCAAGACATCAACATTTGCCCTCAGG...CCGGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp GGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTACTGGAGGAGTGTTGTaGATCTGTGACCACAAACAA +
Preference number: 2 (lower is better)
Translates to: GLQQPPFFILFSSGVVAATGGVL*ICDHKQ
Trigger: TTGTTTGTGGTCACAGATGCACAACACTCCTCCAGT...AGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR GCA 90 bp GCTCCTCTTCACGTAGGAATCCTCTTCATAAACATCTCGGGACAAGCCGAAATCCACCGTGGTGTACCCTaGTCTGCCTTTCAGATGGAA +
Preference number: 2 (lower is better)
Translates to: APLHVGILFINISGQAEIHRGVP*SAFQME
Trigger: TTCCATCTGAAAGGCAGAGCAGGGTACACCACGGTG...GATTTCGGCTTGTCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp AGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACCAGGCTGAGTGGTGCTaGTGGCTCCTTTCTCAACTG +
Preference number: 2 (lower is better)
Translates to: STTDHVLSKSNCSSFSTDQAEWC*WLLSQL
Trigger: CAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTG...GTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR-3UTR CCA 90 bp TGTAATCAGAGGTGTAGCAGTCCTTGGTCATTGTCATTGCTACTTCTAACACAGGCCTCTACTTGGCTGTaGGGTGTGCTGCAGGCTGGT +
Preference number: 2 (lower is better)
Translates to: CNQRCSSPWSLSLLLLTQASTWL*GVLQAG
Trigger: ACCAGCCTGCAGCACACCCCACAGCCAAGTAGAGGC...CTGTGTTAGAAGTAGCAATGACAATGACCAAGGACTGCTACACCTCTGATTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp GGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACAAACCTGTTGCAGCACGCATCCAAGCCTTaGCCTCACAAAATGCCACAA +
Preference number: 2 (lower is better)
Translates to: GQLFRPGVLTLLRTNLLQHASKP*PHKMPQ
Trigger: TTGTGGCATTTTGTGAGGCCAAGGCTTGGATGCGTG...CTGCAACAGGTTTGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR CAA 90 bp CTGCTGAGACTTCCCAAAAGCTGCCCCCACAAGACTGGAGGAGTGTaGTGCATCTGTGACCACAAACAAGCAATGAAGAATGACAAGAAG +
Preference number: 2 (lower is better)
Translates to: LLRLPKSCPHKTGGV*CICDHKQAMKNDKK
Trigger: CTTCTTGTCATTCTTCATTGCTTGTTTGTGGTCACAGATGCACAACACTCCTCCAGTCTTGTGGGGGCAGCTTTTGGGAAGTCTCAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR TCA 90 bp TTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCCTCGCTACAAGCAATGAAGAATaGCAAGAAGCTTATGAGTCA +
Preference number: 2 (lower is better)
Translates to: FVRLLLPALQHQAVHLLATSNEE*QEAYES
Trigger: TGACTCATAAGCTTCTTGTCATTCTTCATTGCTTGT...AGCGAGGAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR TCA 90 bp AAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCAAGTGTTGTGCATCTGTaGCCACAAACAAGCAATGAA +
Preference number: 2 (lower is better)
Translates to: KLSLWVCAHTPQGSITHASVVHL*PQTSNE
Trigger: TTCATTGCTTGTTTGTGGTCACAGATGCACAACACT...TGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR GCA 90 bp AGAGTTTTTCCAAGAACCAAGTTCTTCCGAGGGAATTCCCACTTTGGATCCTCCCTTTTGTCCGGCTCCTaGTTCCAGCATTGCAGCATC +
Preference number: 2 (lower is better)
Translates to: RVFPRTKFFRGNSHFGSSLLSGS*FQHCSI
Trigger: GATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAG...GGAGGATCCAAAGTGGGAATTCCCTCGGAAGAACTTGGTTCTTGGAAAAACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CCA 90 bp ATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCATGTTCTTTCAAAAAACTGGGGCTGAGGCTTaGCCAGTGGCTGCTCGCCAG +
Preference number: 2 (lower is better)
Translates to: IFTVHCKTTAPQTMFFQKTGAEA*PVAARQ
Trigger: CTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGT...TTTTTGAAAGAACATGGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340058.6
3UTR-3UTR TCA 90 bp GAAAGCATCCAGTTAGCATATACACTATCATTTGGATATCTTGGAAACCCAGTGCAAGATCTCGAATGCTaGGCCCAGGCCCATCCTCGG +
Preference number: 2 (lower is better)
Translates to: ESIQLAYTLSFGYLGNPVQDLEC*AQAHPR
Trigger: CCGAGGATGGGCCTGGGCTCAGCATTCGAGATCTTG...CACTGGGTTTCCAAGATATCCAAATGATAGTGTATATGCTAACTGGATGCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR CCA 90 bp AGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACGCTGAGTGGTGCTGGTaGCTCCTTTCTCAACTGAAT +
Preference number: 2 (lower is better)
Translates to: STTDHVLSKSNCSSFSTDAEWCW*LLSQLN
Trigger: ATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGC...GTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR-3UTR CCA 90 bp CTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACCGGCCTTAACACAGAATGTTGGTaGTCACTGATGGACACAGAC +
Preference number: 2 (lower is better)
Translates to: LLTIIFSRSLLMSANTGLNTECW*SLMDTD
Trigger: GTCTGTGTCCATCAGTGACCACCAACATTCTGTGTT...AAGGCCGGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR CCA 90 bp GACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCAGGCAGTGTTTTGGCACGTGAGGATGATGTaGTGGGCCCGGGGGACAAAT +
Preference number: 2 (lower is better)
Translates to: DYFKSYQCFKSEEQAVFWHVRMM*WARGTN
Trigger: ATTTGTCCCCCGGGCCCACCACATCATCCTCACGTG...CCAAAACACTGCCTGCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp GTAGTCTCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAATGCCATCCATTTAACTaGAATCCGACCCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: VVSPLNHHLLQVFADVRKCHPFN*NPTLAP
Trigger: AGGAGCCAGGGTCGGATTCCAGTTAAATGGATGGCA...TTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGAGACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR GCA 90 bp TCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCCTTTTTAAGTCCTATCAGTaGTTTAAGTCTGAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: SGCVRTHHKALLHTHPSLFKSYQ*FKSEEQ
Trigger: CTGCTCTTCAGACTTAAAGCACTGATAGGACTTAAA...AAGGCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp AAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCAGAAGCTTATGAGTCATaGTCAGAATCTAAGAAACAG +
Preference number: 2 (lower is better)
Translates to: KLSLWVCAHTPQGSITHAEAYES*SESKKQ
Trigger: CTGTTTCTTAGATTCTGACCATGACTCATAAGCTTC...TGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp GGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTGAAGCTTATGAGTCATaGTCAGAATCTAAGAAACAG +
Preference number: 2 (lower is better)
Translates to: GLQQPPFFILFSSGVVAAEAYES*SESKKQ
Trigger: CTGTTTCTTAGATTCTGACCATGACTCATAAGCTTC...AGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR TCA 90 bp AGACAATTAGGTTATTGGTCAAGGATAAATTGGTCAAGGATAAATTCCCCATCACAAGATCTCGAATGCTaGGCCCAGGCCCATCCTCGG +
Preference number: 2 (lower is better)
Translates to: RQLGYWSRINWSRINSPSQDLEC*AQAHPR
Trigger: CCGAGGATGGGCCTGGGCTCAGCATTCGAGATCTTG...TGATGGGGAATTTATCCTTGACCAATTTATCCTTGACCAATAACCTAATTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR GCA 90 bp TTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGAACACGTGAGGATCTGAAGAGAAAGGAATaGTTAACCACTAAGACTCAG +
Preference number: 2 (lower is better)
Translates to: FILFSSGVVAAQYRTREDLKRKE*LTTKTQ
Trigger: CTGAGTCTTAGTGGTTAAGCATTCCTTTCTCTTCAG...ATCCTCACGTGTTCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR GCA 90 bp GACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCAGGCAGTGTTTTGGAGACTTCCCAAAAGCTaGCCCCACAAGACTGGAGGA +
Preference number: 2 (lower is better)
Translates to: DYFKSYQCFKSEEQAVFWRLPKS*PHKTGG
Trigger: TCCTCCAGTCTTGTGGGGGCAGCTTTTGGGAAGTCT...CCAAAACACTGCCTGCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR GCA 90 bp GACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCAGGCAGTGTTTTGGCTTTTGTCCGGCTCCTaGTTCCAGCATTGCAGCATC +
Preference number: 2 (lower is better)
Translates to: DYFKSYQCFKSEEQAVFWLLSGS*FQHCSI
Trigger: GATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAG...CCAAAACACTGCCTGCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR CCA 90 bp GTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCTATTCAACCTGTTCTTaGTCTCCCCTGAGAGTTCCG +
Preference number: 2 (lower is better)
Translates to: VLARTIFTVHCKTTAPQTYSTCS*SPLRVP
Trigger: CGGAACTCTCAGGGGAGACCAAGAACAGGTTGAATA...GGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340058.6
3UTR-3UTR CCA 90 bp TCTGCATTTACGTGTATGAAAATTCCAGTAGAGCTAATAAGGATGGGGACTTTTAACGAGTCTGCCACCTaGGAACTGAACACGGCTCGG +
Preference number: 2 (lower is better)
Translates to: SAFTCMKIPVELIRMGTFNESAT*ELNTAR
Trigger: CCGAGCCGTGTTCAGTTCCCAGGTGGCAGACTCGTT...AAAAGTCCCCATCCTTATTAGCTCTACTGGAATTTTCATACACGTAAATGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp AGACAATTAGGTTATTGGTCAAGGATAAATTGGTCAAGGATAAATTCCCCATCACTTCCCCTCCAGCCCTaGAGGGGCATTGACACTACC +
Preference number: 2 (lower is better)
Translates to: RQLGYWSRINWSRINSPSLPLQP*RGIDTT
Trigger: GGTAGTGTCAATGCCCCTCCAGGGCTGGAGGGGAAG...TGATGGGGAATTTATCCTTGACCAATTTATCCTTGACCAATAACCTAATTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp GACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCAGGCAGTGTTTTGGTGCTGTCAGCAATTCTaGGACTCCAACAGCCCCCTT +
Preference number: 2 (lower is better)
Translates to: DYFKSYQCFKSEEQAVFWCCQQF*DSNSPL
Trigger: AAGGGGGCTGTTGGAGTCCCAGAATTGCTGACAGCA...CCAAAACACTGCCTGCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR TCA 90 bp AGCATTTTTCAAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATACCACAAACAAGCAATaGAGAATGACAAGAAGCTTA +
Preference number: 2 (lower is better)
Translates to: SIFQTLPLGVCAHTTRLYTTNKQ*RMTRSL
Trigger: TAAGCTTCTTGTCATTCTTCATTGCTTGTTTGTGGT...ATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTTGAAAAATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR TCA 90 bp AGACAATTAGGTTATTGGTCAAGGATAAATTGGTCAAGGATAAATTCCCCATCATCTCCAGGTCTTTGCTaGTGTCCGCAAACACCGGCC +
Preference number: 2 (lower is better)
Translates to: RQLGYWSRINWSRINSPSSPGLC*CPQTPA
Trigger: GGCCGGTGTTTGCGGACATCAGCAAAGACCTGGAGA...TGATGGGGAATTTATCCTTGACCAATTTATCCTTGACCAATAACCTAATTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR CCA 90 bp TCCCCATCACTGGGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACAGAAGTAAAACCACCTTaGAAGTTAAAACAAACTACC +
Preference number: 2 (lower is better)
Translates to: SPSLGQLFRPGVLTLLRTEVKPP*KLKQTT
Trigger: GGTAGTTTGTTTTAACTTCCAAGGTGGTTTTACTTC...TGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACCCAGTGATGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp CCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTAGAAGTAAAACCACCTTaGAAGTTAAAACAAACTACC +
Preference number: 2 (lower is better)
Translates to: PTAPFLHTVLIRGSGCSVEVKPP*KLKQTT
Trigger: GGTAGTTTGTTTTAACTTCCAAGGTGGTTTTACTTC...TACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp AGACAATTAGGTTATTGGTCAAGGATAAATTGGTCAAGGATAAATTCCCCATCAGCTTTCGCCTCTACTTaGCTGTGGGGTGTGCTGCAG +
Preference number: 2 (lower is better)
Translates to: RQLGYWSRINWSRINSPSAFAST*LWGVLQ
Trigger: CTGCAGCACACCCCACAGCCAAGTAGAGGCGAAAGC...TGATGGGGAATTTATCCTTGACCAATTTATCCTTGACCAATAACCTAATTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR TCA 90 bp GCTCCTCTTCACGTAGGAATCCTCTTCATAAACATCTCGGGACAAGCCGAAATCACCACAAACAAGCAATaGAGAATGACAAGAAGCTTA +
Preference number: 2 (lower is better)
Translates to: APLHVGILFINISGQAEITTNKQ*RMTRSL
Trigger: TAAGCTTCTTGTCATTCTTCATTGCTTGTTTGTGGT...GATTTCGGCTTGTCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR GCA 90 bp TCTGCATTTACGTGTATGAAAATTCCAGTAGAGCTAATAAGGATGGGGACTTTTCAGCAGCAAAGCCTCTaGTGTCAGCAATTCTGGGAC +
Preference number: 2 (lower is better)
Translates to: SAFTCMKIPVELIRMGTFQQQSL*CQQFWD
Trigger: GTCCCAGAATTGCTGACAGCAGAGGCTTTGCTGCTG...AAAAGTCCCCATCCTTATTAGCTCTACTGGAATTTTCATACACGTAAATGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR GCA 90 bp TTCTGCATTTACGTGTATGAAAATTCCAGTAGAGCTAATAAGGATGGGGACTTTTCCTGCTTCCAGCATTaGAGCATCAGGCGGTACATC +
Preference number: 2 (lower is better)
Translates to: FCIYVYENSSRANKDGDFSCFQH*SIRRYI
Trigger: GATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGA...AAAGTCCCCATCCTTATTAGCTCTACTGGAATTTTCATACACGTAAATGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR GCA 90 bp CTATTACACACGCATCCAAGCCTTGGCCTCACAAAATGCCACAATTTTGCTGTTCTGAAGAGAAAGGAATaGTTAACCACTAAGACTCAG +
Preference number: 2 (lower is better)
Translates to: LLHTHPSLGLTKCHNFAVLKRKE*LTTKTQ
Trigger: CTGAGTCTTAGTGGTTAAGCATTCCTTTCTCTTCAG...AACAGCAAAATTGTGGCATTTTGTGAGGCCAAGGCTTGGATGCGTGTGTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp CCAAATTCGCCTTCTCCTAGAGTTTTTCCAAGAACCAAGTTCTTCCGAGGGAATGTTCAGAGCAGACTTTaGTTTTGTTCAGACCAGAAA +
Preference number: 2 (lower is better)
Translates to: PNSPSPRVFPRTKFFRGNVQSRL*FCSDQK
Trigger: TTTCTGGTCTGAACAAAACCAAAGTCTGCTCTGAAC...ATTCCCTCGGAAGAACTTGGTTCTTGGAAAAACTCTAGGAGAAGGCGAATTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR-3UTR CCA 90 bp AAATCACCGGCTATCAGAAGTAAAACCACCTTGGAAGTTAAAACAAACTACCAATGCCATCCATTTAACTaGAATCCGACCCTGGCTCCT +
Preference number: 2 (lower is better)
Translates to: KSPAIRSKTTLEVKTNYQCHPFN*NPTLAP
Trigger: AGGAGCCAGGGTCGGATTCCAGTTAAATGGATGGCA...TTGGTAGTTTGTTTTAACTTCCAAGGTGGTTTTACTTCTGATAGCCGGTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR CCA 90 bp AAGTACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTGCCTAAATGTAAACTaGATGCAAAGTCAGACATTT +
Preference number: 2 (lower is better)
Translates to: KYYDLIPTPEAPYSTCSWCLNVN*MQSQTF
Trigger: AAATGTCTGACTTTGCATCCAGTTTACATTTAGGCA...CCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR-3UTR TCA 90 bp AAACAAGCAATGAAGAATGACAAGAAGCTTATGAGTCATGGTCAGAATCTAAGAAATGTTGGTGGTCACTaGTGGACACAGACCAACACT +
Preference number: 2 (lower is better)
Translates to: KQAMKNDKKLMSHGQNLRNVGGH*WTQTNT
Trigger: AGTGTTGGTCTGTGTCCATCAGTGACCACCAACATT...TCTTAGATTCTGACCATGACTCATAAGCTTCTTGTCATTCTTCATTGCTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR TCA 90 bp AGACAATTAGGTTATTGGTCAAGGATAAATTGGTCAAGGATAAATTCCCCATCACGCAGTCTCTCATTCTaGATAAGGACAGGTCATCAG +
Preference number: 2 (lower is better)
Translates to: RQLGYWSRINWSRINSPSRSLSF*IRTGHQ
Trigger: CTGATGACCTGTCCTTATTCAGAATGAGAGACTGCG...TGATGGGGAATTTATCCTTGACCAATTTATCCTTGACCAATAACCTAATTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CCA 90 bp CAGTATTTGAATGAGACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCATAGTAAAGATGGCATaGAATCTCTCCATTGTGCTA +
Preference number: 2 (lower is better)
Translates to: QYLNETILSPISALSLKSIVKMA*NLSIVL
Trigger: TAGCACAATGGAGAGATTCCATGCCATCTTTACTAT...GCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTCTCATTCAAATACTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR GCA 72 bp GGCTGCCTCCACTGCCCAGGTAGCCAGGCCCCACTTTaGGGCTCTCGCGGAGGAAGCCCCGCAGGGAGCCGT +
Preference number: 3 (lower is better)
Translates to: GCLHCPGSQAPL*GSRGGSPAGSR
Trigger: ACGGCTCCCTGCGGGGCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCTACCTGGGCAGTGGAGGCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR CCA 72 bp CTGAGGCTTGGCCAGTGGCTGCTCGCCAGTGCCGGGTaGCCTCTGAGAGGCACCTGCCTGCCCAGGAGGGGT +
Preference number: 3 (lower is better)
Translates to: LRLGQWLLASAG*PLRGTCLPRRG
Trigger: ACCCCTCCTGGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCCAAGCCTCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR TCA 72 bp GGCCGCCACACTCCTCACACTCCAGCCGTCTCTTGCTaGCTGCACAGGACAGGGGGCAGCCCGCCTCCTCGG +
Preference number: 3 (lower is better)
Translates to: GRHTPHTPAVSC*LHRTGGSPPPR
Trigger: CCGAGGAGGCGGGCTGCCCCCTGTCCTGTGCAGTCAGCAAGAGACGGCTGGAGTGTGAGGAGTGTGGCGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CAA 90 bp CAGGTAGCCAGGCCCCACTTTGCGGCTCTCGCGGAGGAAGCCCCGCAGGGAGCCATCTCCTCGCTGCAGTaGTCTGGCCTCTCCATCCGG +
Preference number: 3 (lower is better)
Translates to: QVARPHFAALAEEAPQGAISSLQ*SGLSIR
Trigger: CCGGATGGAGAGGCCAGACAACTGCAGCGAGGAGAT...GGCTCCCTGCGGGGCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCTACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR GCA 72 bp GCCACACTCCTCACACTCCAGCCGTCTCTTGCTGACTaGACAGGACAGGGGGCAGCCCGCCTCCTCGGCCAC +
Preference number: 3 (lower is better)
Translates to: ATLLTLQPSLAD*TGQGAARLLGH
Trigger: GTGGCCGAGGAGGCGGGCTGCCCCCTGTCCTGTGCAGTCAGCAAGAGACGGCTGGAGTGTGAGGAGTGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR TCA 72 bp AGCCCCGCAGGGAGCCGTATTTGGCGTACTCCACGATaGGGAGGAGCGGGCCATCCTGGCTGCAGGCCCCAT +
Preference number: 3 (lower is better)
Translates to: SPAGSRIWRTPR*GGAGHPGCRPH
Trigger: ATGGGGCCTGCAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAGTACGCCAAATACGGCTCCCTGCGGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR GCA 72 bp CAGTGGGGGTGCGTCCTCCCAGGGCCAGCCAGCTCCTaGAACCTCGCTACCCCTGATGGAGGACATGTGGCT +
Preference number: 3 (lower is better)
Translates to: QWGCVLPGPASS*NLATPDGGHVA
Trigger: AGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCCTGGGAGGACGCACCCCCACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR-3UTR CAA 90 bp AGCCAGGCCCCACTTTGCGGCTCTCGCGGAGGAAGCCCCGCAGGGAGCCGTATTCACTCCAGCCGTCTCTaGCTGACTGCACAGGACAGG +
Preference number: 3 (lower is better)
Translates to: SQAPLCGSRGGSPAGSRIHSSRL*LTAQDR
Trigger: CCTGTCCTGTGCAGTCAGCAAGAGACGGCTGGAGTG...AATACGGCTCCCTGCGGGGCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CAA 90 bp AGGGAGCCGTATTTGGCGTACTCCACGATGAGGAGGAGCGGGCCATCCTGGCTGCCGTCGGGGCAGGTCTaGGTGCTGGGAGAGCAGGTG +
Preference number: 3 (lower is better)
Translates to: REPYLAYSTMRRSGPSWLPSGQV*VLGEQV
Trigger: CACCTGCTCTCCCAGCACCAAGACCTGCCCCGACGG...CAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAGTACGCCAAATACGGCTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR TCA 72 bp GTCGGCACTCACCCTCCAGGAGCCTGTAGGCCACGCTaGTGTTGGGGCACAAGAACTGCACAGGCAGCAGGC +
Preference number: 3 (lower is better)
Translates to: VGTHPPGACRPR*CWGTRTAQAAG
Trigger: GCCTGCTGCCTGTGCAGTTCTTGTGCCCCAACATCAGCGTGGCCTACAGGCTCCTGGAGGGTGAGTGCCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638465.1
3UTR-3UTR CAA 90 bp GGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGAGAGGCACCTGCCTGCCCGGTTCAGAGCAGACTTaGGTTTTGTTCAGACCAGAA +
Preference number: 3 (lower is better)
Translates to: GQWLLASAGWPLRGTCLPGSEQT*VLFRPE
Trigger: TTCTGGTCTGAACAAAACCAAAGTCTGCTCTGAACC...GGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR-3UTR CAA 90 bp CAGGTAGCCAGGCCCCACTTTGCGGCTCTCGCGGAGGAAGCCCCGCAGGGAGCCGCAAATGTTGATGTCTaGGGTCTCCACAACATCGCA +
Preference number: 3 (lower is better)
Translates to: QVARPHFAALAEEAPQGAANVDV*GLHNIA
Trigger: TGCGATGTTGTGGAGACCCAAGACATCAACATTTGC...GGCTCCCTGCGGGGCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCTACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR GCA 72 bp ACTGGTGGAAGGTGCCTGGGGGTCGGTTCTCCCGAATaGGGAAGGAGGGCCTTGTCTCTGGGAAGCAGAGCT +
Preference number: 3 (lower is better)
Translates to: TGGRCLGVGSPE*GRRALSLGSRA
Trigger: AGCTCTGCTTCCCAGAGACAAGGCCCTCCTTCCGCATTCGGGAGAACCGACCCCCAGGCACCTTCCACCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638465.1
3UTR-3UTR CAA 90 bp GCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATGTCTTCGCCGGTCTTCAGAAGGTaGAAGAGCCGCTCAGGAGGA +
Preference number: 3 (lower is better)
Translates to: AAITVRHSSSHSGSWMSSPVFRR*KSRSGG
Trigger: TCCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCGG...CGAAGACATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR TCA 72 bp CTGGCCTCTCCATCCGGTGGCCGGTCTTCAGAAGGTTaGAGAGCCGCTCAGGAGGAATCCCAGGATAGGGGT +
Preference number: 3 (lower is better)
Translates to: LASPSGGRSSEG*RAAQEESQDRG
Trigger: ACCCCTATCCTGGGATTCCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCGGCCACCGGATGGAGAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
3UTR CCA 72 bp GGGCGGGCCTCCGGAAGGTCATCTCAGCTGAGGAGATaGGTGGCTTGTGGGCAAACTTGTGGTAGCAGTGGA +
Preference number: 3 (lower is better)
Translates to: GRASGRSSQLRR*VACGQTCGSSG
Trigger: TCCACTGCTACCACAAGTTTGCCCACAAGCCACCCATCTCCTCAGCTGAGATGACCTTCCGGAGGCCCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR CCA 72 bp CAGCATCAGGCGGTACATCTCCTCGCTGCAGTTGTCTaGCCTCTCCATCCGGTGGCCGGTCTTCAGAAGGTT +
Preference number: 3 (lower is better)
Translates to: QHQAVHLLAAVV*PLHPVAGLQKV
Trigger: AACCTTCTGAAGACCGGCCACCGGATGGAGAGGCCAGACAACTGCAGCGAGGAGATGTACCGCCTGATGCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CAA 90 bp GACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATATCTTCTCCAGGTCTTaGCTGATGTCCGCAAACACC +
Preference number: 3 (lower is better)
Translates to: DSGCDHRAAQLVAQWILDIFSRS*LMSANT
Trigger: GGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGAT...ATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CAA 90 bp CTTCTCCTCCTCAGGGAAGCAGTTGCAGGTGCCATAGCCAGCTTTAATCCCCCGCCGGTCTTCAGAAGGTaGAAGAGCCGCTCAGGAGGA +
Preference number: 3 (lower is better)
Translates to: LLLLREAVAGAIASFNPPPVFRR*KSRSGG
Trigger: TCCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCGG...CGGGGGATTAAAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGGAGGAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CAA 90 bp GGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCCTCGCTGCAGTTGCTCCTGCTTCCAGCATaGCAGCATCAGGCGGTACAT +
Preference number: 3 (lower is better)
Translates to: GSCFQHCSIRRYISSLQLLLLPA*QHQAVH
Trigger: ATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAG...CAACTGCAGCGAGGAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CAA 90 bp GAACGAGCTTCATCTCGGCCAGATACTGCATCCCCTGTGAGATCTGCCAGGCAACGCAGGGAGCCGTATTaGGCGTACTCCACGATGAGG +
Preference number: 3 (lower is better)
Translates to: ERASSRPDTASPVRSARQRREPY*AYSTMR
Trigger: CCTCATCGTGGAGTACGCCAAATACGGCTCCCTGCG...TTGCCTGGCAGATCTCACAGGGGATGCAGTATCTGGCCGAGATGAAGCTCGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR TCA 72 bp CAATGCTGCCCCGGAGGCAGTCCTGAGGGCAAATGTTaGTGTCTTGGGTCTCCACAACATCGCAGTGGCCGT +
Preference number: 3 (lower is better)
Translates to: QCCPGGSPEGKC*CLGSPQHRSGR
Trigger: ACGGCCACTGCGATGTTGTGGAGACCCAAGACATCAACATTTGCCCTCAGGACTGCCTCCGGGGCAGCATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR TCA 72 bp ATGTGGGTGGTTGACCTGCTTCAGGACGTTGAACTCTaGCAGCAGGTCTCGCAGCTCACTCGGGGAGGCGTT +
Preference number: 3 (lower is better)
Translates to: MWVVDLLQDVEL*QQVSQLTRGGV
Trigger: AACGCCTCCCCGAGTGAGCTGCGAGACCTGCTGTCAGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR GCA 72 bp AACACCGGCCTTTTGTCCGGCTCCTGCTTCCAGCATTaGAGCATCAGGCGGTACATCTCCTCGCTGCAGTTG +
Preference number: 3 (lower is better)
Translates to: NTGLLSGSCFQH*SIRRYISSLQL
Trigger: CAACTGCAGCGAGGAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAGGCCGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
3UTR CCA 72 bp TGGCTGCTCAGTACCGAACACGTGAGGATGATGTGGTaGGCCCGGGGGACAAATGTGTCTTGTGAGCCCTCT +
Preference number: 3 (lower is better)
Translates to: WLLSTEHVRMMW*ARGTNVSCEPS
Trigger: AGAGGGCTCACAAGACACATTTGTCCCCCGGGCCCACCACATCATCCTCACGTGTTCGGTACTGAGCAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CAA 90 bp GCTCCTCTTCACGTAGGAATCCTCTTCATAAACATCTCGGGACAAGCCGAAATCTCCAGGGAGCTGGAGTaGCGGCTGCCTCCACTGCCC +
Preference number: 3 (lower is better)
Translates to: APLHVGILFINISGQAEISRELE*RLPPLP
Trigger: GGGCAGTGGAGGCAGCCGCAACTCCAGCTCCCTGGA...GATTTCGGCTTGTCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR GCA 72 bp AAGCCCTACCTGCTCCTAACAGGTAGGATGAGCCACTaGTTTCGCCTCTACTTGGCTGTGGGGTGTGCTGCA +
Preference number: 3 (lower is better)
Translates to: KPYLLLTGRMSH*FRLYLAVGCAA
Trigger: TGCAGCACACCCCACAGCCAAGTAGAGGCGAAAGCAGTGGCTCATCCTACCTGTTAGGAGCAGGTAGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CAA 90 bp GAACGAGCTTCATCTCGGCCAGATACTGCATCCCCTGTGAGATCTGCCAGGCAACTCCTGCTTCCAGCATaGCAGCATCAGGCGGTACAT +
Preference number: 3 (lower is better)
Translates to: ERASSRPDTASPVRSARQLLLPA*QHQAVH
Trigger: ATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAG...TTGCCTGGCAGATCTCACAGGGGATGCAGTATCTGGCCGAGATGAAGCTCGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CAA 90 bp ACAGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGCCGTCGGGGCAGGTCTaGGTGCTGGGAGAGCAGGTG +
Preference number: 3 (lower is better)
Translates to: TAPQTMFFQKATAPALALPSGQV*VLGEQV
Trigger: CACCTGCTCTCCCAGCACCAAGACCTGCCCCGACGG...CAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR-3UTR CAA 90 bp GCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATGTCTTCGAGACCATACATCACTTaGCGTGGTGTAGATATGATC +
Preference number: 3 (lower is better)
Translates to: AAITVRHSSSHSGSWMSSRPYIT*RGVDMI
Trigger: GATCATATCTACACCACGCAAAGTGATGTATGGTCT...CGAAGACATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CAA 90 bp AAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCACTCCTGCTTCCAGCATaGCAGCATCAGGCGGTACAT +
Preference number: 3 (lower is better)
Translates to: KLSLWVCAHTPQGSITHALLLPA*QHQAVH
Trigger: ATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAG...TGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR CAA 90 bp ATGCAGAAGGCAGACAGCAGCACCGAGACGATGAAGGAGAAGAGGACAGCGGCTATCTTCTCCAGGTCTTaGCTGATGTCCGCAAACACC +
Preference number: 3 (lower is better)
Translates to: MQKADSSTETMKEKRTAAIFSRS*LMSANT
Trigger: GGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGAT...AGCCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCTGCTGTCTGCCTTCTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CAA 90 bp AAACATCTCGGGACAAGCCGAAATCCGAAATCTTCATCTTCCGCCCCTCAGCTACACTCCAGCCGTCTCTaGCTGACTGCACAGGACAGG +
Preference number: 3 (lower is better)
Translates to: KHLGTSRNPKSSSSAPQLHSSRL*LTAQDR
Trigger: CCTGTCCTGTGCAGTCAGCAAGAGACGGCTGGAGTG...TAGCTGAGGGGCGGAAGATGAAGATTTCGGATTTCGGCTTGTCCCGAGATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR TCA 72 bp GGCATTATTACAGTCCACCAGCGGTGTCTCCTCCTCTaGGAGGCCGTCGTCATAAATCAGGGAGTCAGATGG +
Preference number: 3 (lower is better)
Translates to: GIITVHQRCLLL*EAVVINQGVRW
Trigger: CCATCTGACTCCCTGATTTATGACGACGGCCTCTCAGAGGAGGAGACACCGCTGGTGGACTGTAATAATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
3UTR GCA 72 bp ACACAGCCAGAAGAGCTGCTGAGACTTCCCAAAAGCTaGCCCCACAAGACTGGAGGAGTGTTGTGCATCTGT +
Preference number: 3 (lower is better)
Translates to: TQPEELLRLPKS*PHKTGGVLCIC
Trigger: ACAGATGCACAACACTCCTCCAGTCTTGTGGGGGCAGCTTTTGGGAAGTCTCAGCAGCTCTTCTGGCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CAA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCTTATTCAACCTGTTCTaGGTCTCCCCTGAGAGTTCC +
Preference number: 3 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTLFNLF*VSPESS
Trigger: GGAACTCTCAGGGGAGACCAAGAACAGGTTGAATAA...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR-3UTR CAA 90 bp AGCATTTTTCAAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATCCGGTCTTCAGAAGGTaGAAGAGCCGCTCAGGAGGA +
Preference number: 3 (lower is better)
Translates to: SIFQTLPLGVCAHTTRLYPVFRR*KSRSGG
Trigger: TCCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCGG...ATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTTGAAAAATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR CAA 90 bp GTCTCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACATCTCCTCGCTGCAGTaGTCTGGCCTCTCCATCCGG +
Preference number: 3 (lower is better)
Translates to: VSPLNHHLLQVFADVRKHISSLQ*SGLSIR
Trigger: CCGGATGGAGAGGCCAGACAACTGCAGCGAGGAGAT...GTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
3UTR GCA 72 bp GCCCCATACAATTTGATGACATGTGGGTGGTTGACCTaGTTCAGGACGTTGAACTCTGACAGCAGGTCTCGC +
Preference number: 3 (lower is better)
Translates to: APYNLMTCGWLT*FRTLNSDSRSR
Trigger: GCGAGACCTGCTGTCAGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACATGTCATCAAATTGTATGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR CCA 72 bp TGGCTGCAGGCCCCATACAATTTGATGACATGTGGGTaGTTGACCTGCTTCAGGACGTTGAACTCTGACAGC +
Preference number: 3 (lower is better)
Translates to: WLQAPYNLMTCG*LTCFRTLNSDS
Trigger: GCTGTCAGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACATGTCATCAAATTGTATGGGGCCTGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CAA 90 bp CAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGATGTGAACACAGAATGTaGGTGGTCACTGATGGACAC +
Preference number: 3 (lower is better)
Translates to: QPPFFILFSSGVVAAQYRCEHRM*VVTDGH
Trigger: GTGTCCATCAGTGACCACCAACATTCTGTGTTCACA...TCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CAA 90 bp ATGCAGAAGGCAGACAGCAGCACCGAGACGATGAAGGAGAAGAGGACAGCGGCTAGACCATACATCACTTaGCGTGGTGTAGATATGATC +
Preference number: 3 (lower is better)
Translates to: MQKADSSTETMKEKRTAARPYIT*RGVDMI
Trigger: GATCATATCTACACCACGCAAAGTGATGTATGGTCT...AGCCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCTGCTGTCTGCCTTCTGCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CAA 90 bp GGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTACGTGTCCATTAATTTaGCCGCTGAGGGTGAAAGCA +
Preference number: 3 (lower is better)
Translates to: GLQQPPFFILFSSGVVAATCPLI*PLRVKA
Trigger: TGCTTTCACCCTCAGCGGCAAAATTAATGGACACGT...AGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR CAA 90 bp AAACATCTCGGGACAAGCCGAAATCCGAAATCTTCATCTTCCGCCCCTCAGCTAATGACATGTGGGTGGTaGACCTGCTTCAGGACGTTG +
Preference number: 3 (lower is better)
Translates to: KHLGTSRNPKSSSSAPQLMTCGW*TCFRTL
Trigger: CAACGTCCTGAAGCAGGTCAACCACCCACATGTCAT...TAGCTGAGGGGCGGAAGATGAAGATTTCGGATTTCGGCTTGTCCCGAGATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR CCA 72 bp AGTGTTGGACCCACACATGTGAACACAGAATGTTGGTaGTCACTGATGGACACAGACCAACACTGGGTGCTG +
Preference number: 3 (lower is better)
Translates to: SVGPTHVNTECW*SLMDTDQHWVL
Trigger: CAGCACCCAGTGTTGGTCTGTGTCCATCAGTGACCACCAACATTCTGTGTTCACATGTGTGGGTCCAACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CAA 90 bp CTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCTTCCTACTGCCTTTTTaGTGTGTGTGCTTCATGTTT +
Preference number: 3 (lower is better)
Translates to: LSLWVCAHTPQGSITHASFLLPF*CVCFMF
Trigger: AAACATGAAGCACACACACAAAAAAGGCAGTAGGAA...GGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR CCA 72 bp GATTCACAGCAGCAAAGCCTCTGCTGTCAGCAATTCTaGGACTCCAACAGCCCCCTTTCTTCATACTGTTCT +
Preference number: 3 (lower is better)
Translates to: DSQQQSLCCQQF*DSNSPLSSYCS
Trigger: AGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGAATTGCTGACAGCAGAGGCTTTGCTGCTGTGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CAA 90 bp CTTCCCAAAAGCTGCCCCCACAAGACTGGAGGAGTGTTGTGCATCTGTGACCACTTCCTACTGCCTTTTTaGTGTGTGTGCTTCATGTTT +
Preference number: 3 (lower is better)
Translates to: LPKSCPHKTGGVLCICDHFLLPF*CVCFMF
Trigger: AAACATGAAGCACACACACAAAAAAGGCAGTAGGAA...GTGGTCACAGATGCACAACACTCCTCCAGTCTTGTGGGGGCAGCTTTTGGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CAA 90 bp TGCTGTCAGCAATTCTGGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATATCTTCTCCAGGTCTTaGCTGATGTCCGCAAACACC +
Preference number: 3 (lower is better)
Translates to: CCQQFWDSNSPLSSYCSHIFSRS*LMSANT
Trigger: GGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGAT...ATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGAATTGCTGACAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR TCA 72 bp AACAAACTACCAAAAACGAGTCTGCCACCTGGGAACTaGACACGGCTCGGCCAATGTGACGTTCACAAAGAA +
Preference number: 3 (lower is better)
Translates to: NKLPKTSLPPGN*TRLGQCDVHKE
Trigger: TTCTTTGTGAACGTCACATTGGCCGAGCCGTGTTCAGTTCCCAGGTGGCAGACTCGTTTTTGGTAGTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CAA 90 bp GACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCAGGCAGTGTTTTGGTGCTTTCGCCTCTACTaGGCTGTGGGGTGTGCTGCA +
Preference number: 3 (lower is better)
Translates to: DYFKSYQCFKSEEQAVFWCFRLY*AVGCAA
Trigger: TGCAGCACACCCCACAGCCAAGTAGAGGCGAAAGCA...CCAAAACACTGCCTGCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CAA 90 bp GTAGTCTCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAATGGAAGGCCGTTGCCTaGACCACTTTTCCAAATTCG +
Preference number: 3 (lower is better)
Translates to: VVSPLNHHLLQVFADVRKWKAVA*TTFPNS
Trigger: CGAATTTGGAAAAGTGGTCAAGGCAACGGCCTTCCA...TTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGAGACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR-3UTR CAA 90 bp GAAGTTAAAACAAACTACCAAAAACGAGTCTGCCACCTGGGAACTGAACACGGCTGTGAACACAGAATGTaGGTGGTCACTGATGGACAC +
Preference number: 3 (lower is better)
Translates to: EVKTNYQKRVCHLGTEHGCEHRM*VVTDGH
Trigger: GTGTCCATCAGTGACCACCAACATTCTGTGTTCACA...GCCGTGTTCAGTTCCCAGGTGGCAGACTCGTTTTTGGTAGTTTGTTTTAACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR TCA 72 bp TGGGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTaGGAACAAACCTGTTGCAGCAATTCACACTTACTG +
Preference number: 3 (lower is better)
Translates to: WVSCLDLEFLPS*EQTCCSNSHLL
Trigger: CAGTAAGTGTGAATTGCTGCAACAGGTTTGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CAA 90 bp AGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACGGTTCAGAGCAGACTTaGGTTTTGTTCAGACCAGAA +
Preference number: 3 (lower is better)
Translates to: STTDHVLSKSNCSSFSTDGSEQT*VLFRPE
Trigger: TTCTGGTCTGAACAAAACCAAAGTCTGCTCTGAACC...GTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR-3UTR CAA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCTCTACCATCCTAAGTaGCTGGGCAATGTGGTAATT +
Preference number: 3 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSLYHPK*LGNVVI
Trigger: AATTACCACATTGCCCAGCAACTTAGGATGGTAGAG...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
3UTR-3UTR CAA 90 bp TCTGCATTTACGTGTATGAAAATTCCAGTAGAGCTAATAAGGATGGGGACTTTTTGCTTTCGCCTCTACTaGGCTGTGGGGTGTGCTGCA +
Preference number: 3 (lower is better)
Translates to: SAFTCMKIPVELIRMGTFCFRLY*AVGCAA
Trigger: TGCAGCACACCCCACAGCCAAGTAGAGGCGAAAGCA...AAAAGTCCCCATCCTTATTAGCTCTACTGGAATTTTCATACACGTAAATGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR TCA 72 bp CTTGTAGCAGCATTAAATTACAAACACAGGAAGAGCTaGTCCATGGGCCTTTCACACAGGCTCTATAAGAGC +
Preference number: 3 (lower is better)
Translates to: LVAALNYKHRKS*SMGLSHRLYKS
Trigger: GCTCTTATAGAGCCTGTGTGAAAGGCCCATGGATCAGCTCTTCCTGTGTTTGTAATTTAATGCTGCTACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CAA 90 bp GAGTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACTCTACCATCCTAAGTaGCTGGGCAATGTGGTAATT +
Preference number: 3 (lower is better)
Translates to: EFWQEPYLLSIVRPQHHRLYHPK*LGNVVI
Trigger: AATTACCACATTGCCCAGCAACTTAGGATGGTAGAG...TCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
3UTR CCA 72 bp CATCCAGTTAGCATATACACTATCATTTGGATATCTTaGAAACCCAGTGTTAGTGCCATCAGCTCTCGTGAG +
Preference number: 3 (lower is better)
Translates to: HPVSIYTIIWIS*KPSVSAISSRE
Trigger: CTCACGAGAGCTGATGGCACTAACACTGGGTTTCCAAGATATCCAAATGATAGTGTATATGCTAACTGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR-3UTR CAA 90 bp GTAGTCTCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACATATACACTATCATTaGGATATCTTGGAAACCCAG +
Preference number: 3 (lower is better)
Translates to: VVSPLNHHLLQVFADVRKHIHYH*DILETQ
Trigger: CTGGGTTTCCAAGATATCCAAATGATAGTGTATATG...TTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGAGACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615310.4
3UTR CCA 72 bp TTCCCTGATACCACCATCCACATAGTAAAGATGGCATaGAATCTCTCCATTGTGCTAAATCTAGGAATCATC +
Preference number: 3 (lower is better)
Translates to: FPDTTIHIVKMA*NLSIVLNLGII
Trigger: GATGATTCCTAGATTTAGCACAATGGAGAGATTCCATGCCATCTTTACTATGTGGATGGTGGTATCAGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CAA 90 bp CAGTATTTGAATGAGACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCAAGACTGGAGGAGTGTaGTGCATCTGTGACCACAAA +
Preference number: 3 (lower is better)
Translates to: QYLNETILSPISALSLKSKTGGV*CICDHK
Trigger: TTTGTGGTCACAGATGCACAACACTCCTCCAGTCTT...GCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTCTCATTCAAATACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR CCA 72 bp AGGAATAGACAATTAGGTTATTGGTCAAGGATAAATTaGTCAAGGATAAATTCCCCATCACTGGGTCAGCTG +
Preference number: 3 (lower is better)
Translates to: RNRQLGYWSRIN*SRINSPSLGQL
Trigger: CAGCTGACCCAGTGATGGGGAATTTATCCTTGACCAATTTATCCTTGACCAATAACCTAATTGTCTATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CAA 90 bp TTCTGCATTTACGTGTATGAAAATTCCAGTAGAGCTAATAAGGATGGGGACTTTAGCAGTCCTTGGTCATaGTCATTGCTACTTCTAACA +
Preference number: 3 (lower is better)
Translates to: FCIYVYENSSRANKDGDFSSPWS*SLLLLT
Trigger: TGTTAGAAGTAGCAATGACAATGACCAAGGACTGCT...AAAGTCCCCATCCTTATTAGCTCTACTGGAATTTTCATACACGTAAATGCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CAA 90 bp AGACAATTAGGTTATTGGTCAAGGATAAATTGGTCAAGGATAAATTCCCCATCAAGAGCAGGCAGTGTTTaGGTAATCCGACTCTTTTCT +
Preference number: 3 (lower is better)
Translates to: RQLGYWSRINWSRINSPSRAGSV*VIRLFS
Trigger: AGAAAAGAGTCGGATTACCAAAACACTGCCTGCTCT...TGATGGGGAATTTATCCTTGACCAATTTATCCTTGACCAATAACCTAATTGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR-3UTR CAA 90 bp TCTGCATTTACGTGTATGAAAATTCCAGTAGAGCTAATAAGGATGGGGACTTTTAGACCATACATCACTTaGCGTGGTGTAGATATGATC +
Preference number: 3 (lower is better)
Translates to: SAFTCMKIPVELIRMGTFRPYIT*RGVDMI
Trigger: GATCATATCTACACCACGCAAAGTGATGTATGGTCT...AAAAGTCCCCATCCTTATTAGCTCTACTGGAATTTTCATACACGTAAATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615310.4
CDS-3UTR GCA 90 bp GGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGAGAGGCACCTGCCTGCCCCGGGGCACTCAGCGCTaGTGCGCGCCCTGCTTCGGT +
Preference number: 4 (lower is better)
Translates to: GQWLLASAGWPLRGTCLPRGTQR*CAPCFG
Trigger: ACCGAAGCAGGGCGCGCAGCAGCGCTGAGTGCCCCG...GGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGAGAGGCACCTGCCTGCCCGGACGCGACGGACACTaGGGGCGCGACGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: GQWLLASAGWPLRGTCLPGRDGH*GRDARS
Trigger: GGAACGTGCGTCGCGCCCCCAGTGTCCGTCGCGTCC...GGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp GGACTGGGGCTGAGGCTTGGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGGGTCTGGATGGCGGGTaGGGCGCTCAGTCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: GLGLRLGQWLLASAGWPLGLDGG*GAQSGR
Trigger: GCGGCCAGACTGAGCGCCGCACCCGCCATCCAGACC...CAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGAGAGGCACCTGCCTGCCCCTCGCCAGTGCCGGGTaGCCTCTGAGAGGCACCTGC +
Preference number: 4 (lower is better)
Translates to: GQWLLASAGWPLRGTCLPLASAG*PLRGTC
Trigger: GCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAG...GGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp GGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGAGAGGCACCTGCCTGCCCCCAGCCGTCTCTTGCTaGCTGCACAGGACAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GQWLLASAGWPLRGTCLPPAVSC*LHRTGG
Trigger: GCCCCCTGTCCTGTGCAGTCAGCAAGAGACGGCTGG...GGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp GGACTGGGGCTGAGGCTTGGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGTCGCCCGCACGAAGCTaGCGTTGGCCTGGACCGAGG +
Preference number: 4 (lower is better)
Translates to: GLGLRLGQWLLASAGWPLSPARS*RWPGPR
Trigger: CCTCGGTCCAGGCCAACGGCAGCTTCGTGCGGGCGA...CAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR GCA 90 bp GGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGAGAGGCACCTGCCTGCCCGCCTCCACTCACACCTaGCTGTTGGGGAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GQWLLASAGWPLRGTCLPASTHT*LLGSPG
Trigger: GCCTGGGCTCCCCAACAGGCAGGTGTGAGTGGAGGC...GGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp GGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGAGAGGCACCTGCCTGCCCGAAGAGGACAGCGGCTaGGATCACCGTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: GQWLLASAGWPLRGTCLPEEDSG*DHRAAQ
Trigger: CTGTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTC...GGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp GGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGAGAGGCACCTGCCTGCCCGGGCCAGCCAGCTCCTaGAACCTCGCTACCCCTGAT +
Preference number: 4 (lower is better)
Translates to: GQWLLASAGWPLRGTCLPGPASS*NLATPD
Trigger: ATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC...GGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GGGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGACTCCACCACGGCGCTaGCGGTGTCGACGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: GPASSCNLATPDGGHVAGTPPRR*RCRRPR
Trigger: CCGCGGGCGTCGACACCGCCAGCGCCGTGGTGGAGT...CCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CCA 90 bp GGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGAGAGGCACCTGCCTGCCCACAAGCAGCTGGGCCTaGGCCTGCCTAGAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GQWLLASAGWPLRGTCLPTSSWA*ACLEVC
Trigger: GCAGACCTCTAGGCAGGCCCAGGCCCAGCTGCTTGT...GGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp GTTCTCCATGGAGTCCAGCGAGGGCCGGCGGGCACCGGAAGAGGAGTAGCTGACGTGCCGGGTGGCCTCTaGGAGGCACCTGCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: VLHGVQRGPAGTGRGVADVPGGL*EAPACP
Trigger: TGGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCAC...GTCAGCTACTCCTCTTCCGGTGCCCGCCGGCCCTCGCTGGACTCCATGGAGAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR TCA 90 bp GGGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGGGCTGGGACTGGGGCTaGGGCTTGGCCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GPASSCNLATPDGGHVAGGWDWG*GLASGC
Trigger: GCAGCCACTGGCCAAGCCTCAGCCCCAGTCCCAGCC...CCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp GGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGAGAGGCACCTGCCTGCCCGGCCCAATGCCACTTTaGCTAGCAGCGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GQWLLASAGWPLRGTCLPGPMPL*LAAAAA
Trigger: TGCTGCTGCCGCTGCTAGGCAAAGTGGCATTGGGCC...GGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp CAGGTAGCCAGGCCCCACTTTGCGGCTCTCGCGGAGGAAGCCCCGCAGGGAGCCGGAACTGGTGGAAGGTaGCTGGGGGTCGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QVARPHFAALAEEAPQGAGTGGR*LGVGSP
Trigger: GGGAGAACCGACCCCCAGGCACCTTCCACCAGTTCC...GGCTCCCTGCGGGGCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCTACCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR GCA 90 bp GGACTGGGGCTGAGGCTTGGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGCGGGGCAGGTCTTGGTaGTGGGAGAGCAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: GLGLRLGQWLLASAGWPLRGRSW*WESRWR
Trigger: TCTCCACCTGCTCTCCCAGCACCAAGACCTGCCCCG...CAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp TGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCGCGGAGGAAGCCCCGCAGGGAGCTGGAGTTGCGGCTaGCTCCACTGCCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: CPGSQAPLCGSRGGSPAGSWSCG*LHCPGS
Trigger: GCTACCTGGGCAGTGGAGGCAGCCGCAACTCCAGCT...CCCTGCGGGGCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCTACCTGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GAGAAGAGGACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGAATCGCCCGTGCGCGCTaGGGCCACGGCTGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: EKRTAAAITVRHSSSHSGIARAR*GHGWRD
Trigger: GTCCCTCCAGCCGTGGCCCCAGCGCGCACGGGCGAT...TCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp CTCCAGCCGTCTCTTGCTGACTGCACAGGACAGGGGGCAGCCCGCCTCCTCGGCGCGTCCCGCAGGGCATaGACGTACAGCAAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: LQPSLADCTGQGAARLLGASRRA*TYSKGV
Trigger: CACGCCCTTGCTGTACGTCCATGCCCTGCGGGACGC...GCCGAGGAGGCGGGCTGCCCCCTGTCCTGTGCAGTCAGCAAGAGACGGCTGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR CCA 90 bp GGGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGGGCCCAGGCGGAAGCTaGGCACCTCCTCAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: GPASSCNLATPDGGHVAGGPGGS*APPQGR
Trigger: ACGCCCCTGAGGAGGTGCCCAGCTTCCGCCTGGGCC...CCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp TGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCGCGGAGGAAGCCCCGCAGGGGCAGCACCGAGACGATaGAGGAGAAGAGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: CPGSQAPLCGSRGGSPAGAAPRR*RRRGQR
Trigger: CCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCTGC...CCCTGCGGGGCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCTACCTGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp GGGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGCGGAAGAGGAGTAGCTaGCCGGGAAGGCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: GPASSCNLATPDGGHVAGRKRSS*PGRPGR
Trigger: CCGCCCAGGCCTTCCCGGTCAGCTACTCCTCTTCCG...CCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp CTCCTCACACTCCAGCCGTCTCTTGCTGACTGCACAGGACAGGGGGCAGCCCGCCGGAAGAGGAGTAGCTaGCCGGGAAGGCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: LLTLQPSLADCTGQGAARRKRSS*PGRPGR
Trigger: CCGCCCAGGCCTTCCCGGTCAGCTACTCCTCTTCCG...GCGGGCTGCCCCCTGTCCTGTGCAGTCAGCAAGAGACGGCTGGAGTGTGAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp GTTCTCCATGGAGTCCAGCGAGGGCCGGCGGGCACCGGAAGAGGAGTAGCTGACCGGAAGAGGAGTAGCTaGCCGGGAAGGCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: VLHGVQRGPAGTGRGVADRKRSS*PGRPGR
Trigger: CCGCCCAGGCCTTCCCGGTCAGCTACTCCTCTTCCG...GTCAGCTACTCCTCTTCCGGTGCCCGCCGGCCCTCGCTGGACTCCATGGAGAAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATGTCTTCGATCGCCCGTGCGCGCTaGGGCCACGGCTGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: AAITVRHSSSHSGSWMSSIARAR*GHGWRD
Trigger: GTCCCTCCAGCCGTGGCCCCAGCGCGCACGGGCGAT...CGAAGACATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp GGACTGGGGCTGAGGCTTGGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGGTCGGTTCTCCCGAATaGGGAAGGAGGGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GLGLRLGQWLLASAGWPLVGSPE*GRRALS
Trigger: AGACAAGGCCCTCCTTCCGCATTCGGGAGAACCGAC...CAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp CAGGTAGCCAGGCCCCACTTTGCGGCTCTCGCGGAGGAAGCCCCGCAGGGAGCCGTCGGTTCTCCCGAATaGGGAAGGAGGGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: QVARPHFAALAEEAPQGAVGSPE*GRRALS
Trigger: AGACAAGGCCCTCCTTCCGCATTCGGGAGAACCGAC...GGCTCCCTGCGGGGCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCTACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR CCA 90 bp GGGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGGCACAGCCTGGCCACTaGCACTCGCCCTCACGAAGG +
Preference number: 4 (lower is better)
Translates to: GPASSCNLATPDGGHVAGAQPGH*HSPSRR
Trigger: CCTTCGTGAGGGCGAGTGCCAGTGGCCAGGCTGTGC...CCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp CCCACAAGGTCGGCACTCACCCTCCAGGAGCCTGTAGGCCACGCTGATGTTGGGTACGCGGGCACAGCCTaGCCACTGGCACTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: PTRSALTLQEPVGHADVGYAGTA*PLALAL
Trigger: GAGGGCGAGTGCCAGTGGCCAGGCTGTGCCCGCGTA...CCCAACATCAGCGTGGCCTACAGGCTCCTGGAGGGTGAGTGCCGACCTTGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR CCA 90 bp GGACTGGGGCTGAGGCTTGGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGGGGAGTCAGATGGAGTaGACGCCGCAAGGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: GLGLRLGQWLLASAGWPLGSQME*TPQGPS
Trigger: ACTTGGACCTTGCGGCGTCCACTCCATCTGACTCCC...CAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGAGAGGCACCTGCCTGCCCCAGGCTGAGTGGTGCTaGTGGCTCCTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: GQWLLASAGWPLRGTCLPQAEWC*WLLSQL
Trigger: CAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTG...GGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp GGGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGCCTCACCAGCTCCCCTaGTGCAGGTACCACGTCTGC +
Preference number: 4 (lower is better)
Translates to: GPASSCNLATPDGGHVAGPHQLP*CRYHVC
Trigger: GCAGACGTGGTACCTGCATCAGGGGAGCTGGTGAGG...CCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR TCA 90 bp GACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATTGTCCTCGGCTGAGGTaGCCACCCCTAGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: DSGCDHRAAQLVAQWILDCPRLR*PPLACC
Trigger: GCAGCACGCTAGGGGTGGTCACCTCAGCCGAGGACA...ATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp GGACTGGGGCTGAGGCTTGGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGCGGTGTCTCCTCCTCTaGGAGGCCGTCGTCATAAAT +
Preference number: 4 (lower is better)
Translates to: GLGLRLGQWLLASAGWPLRCLLL*EAVVIN
Trigger: ATTTATGACGACGGCCTCTCAGAGGAGGAGACACCG...CAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp GGGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGATCGGCGAGCCCTCCTaGTCACGGAGAGGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: GPASSCNLATPDGGHVAGIGEPS*SRRGSR
Trigger: CCTACTCCCTCTCCGTGAGCAGGAGGGCTCGCCGAT...CCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR GCA 90 bp GGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGAAGCTGGGCCTGGGCCTaGCTAGAGGTCTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: GQPAPATSLPLMEDMWLGSWAWA*LEVCWS
Trigger: CGACCAGCAGACCTCTAGGCAGGCCCAGGCCCAGCT...TCCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp GGGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGCCGTCTCTTGCTGACTaGACAGGACAGGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GPASSCNLATPDGGHVAGPSLAD*TGQGAA
Trigger: GGCTGCCCCCTGTCCTGTGCAGTCAGCAAGAGACGG...CCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp GGGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGCGTGTCCCCCAACAATaGTGCCCCGGAGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GPASSCNLATPDGGHVAGRVPQQ*CPGGSP
Trigger: AGGACTGCCTCCGGGGCAGCATTGTTGGGGGACACG...CCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp GGACTGGGGCTGAGGCTTGGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGCCTCAGGGAAGCAGTTaGAGGTGCCATAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GLGLRLGQWLLASAGWPLPQGSS*RCHSQL
Trigger: AAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGG...CAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp GACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATAGCCAGGCCCCACTTTaGGGCTCTCGCGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: DSGCDHRAAQLVAQWILDSQAPL*GSRGGS
Trigger: GCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCT...ATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp GGGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGGGGCCAGCCAGCTCCTaGAACCTCGCTACCCCTGAT +
Preference number: 4 (lower is better)
Translates to: GPASSCNLATPDGGHVAGGPASS*NLATPD
Trigger: ATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC...CCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp CCCACAAGGTCGGCACTCACCCTCCAGGAGCCTGTAGGCCACGCTGATGTTGGGGCGTCCCGCAGGGCATaGACGTACAGCAAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: PTRSALTLQEPVGHADVGASRRA*TYSKGV
Trigger: CACGCCCTTGCTGTACGTCCATGCCCTGCGGGACGC...CCCAACATCAGCGTGGCCTACAGGCTCCTGGAGGGTGAGTGCCGACCTTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR CCA 90 bp AAGGTGCCTGGGGGTCGGTTCTCCCGAATGCGGAAGGAGGGCCTTGTCTCTGGGGGAGGGCCTTGTCTCTaGGAAGCAGAGCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: KVPGGRFSRMRKEGLVSGGGPCL*EAELPG
Trigger: CCCCGGGAGCTCTGCTTCCCAGAGACAAGGCCCTCC...CCCAGAGACAAGGCCCTCCTTCCGCATTCGGGAGAACCGACCCCCAGGCACCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR CCA 90 bp CTGGTGGAAGGTGCCTGGGGGTCGGTTCTCCCGAATGCGGAAGGAGGGCCTTGTAGCAGGCGGAACTGGTaGAAGGTGCCTGGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: LVEGAWGSVLPNAEGGPCSRRNW*KVPGGR
Trigger: CCGACCCCCAGGCACCTTCCACCAGTTCCGCCTGCT...ACAAGGCCCTCCTTCCGCATTCGGGAGAACCGACCCCCAGGCACCTTCCACCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR CCA 90 bp GGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGAGGCAGCAGGCGGAACTaGTGGAAGGTGCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: GQPAPATSLPLMEDMWLGGSRRN*WKVPGG
Trigger: ACCCCCAGGCACCTTCCACCAGTTCCGCCTGCTGCC...TCCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGAGAAGTTCGGCACACTTaGGCCGCCGCAGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GQPAPATSLPLMEDMWLGEVRHT*AAAGPW
Trigger: CCAAGGCCCTGCGGCGGCCCAAGTGTGCCGAACTTC...TCCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp ATGAGGTCGCCCATGGTGAGGGCCCGCTCATCCGGGTGGTCCAGGGAGCTGGAGTGCCTAGAGGTCTGCTaGTCGGTGGCCACCACCATG +
Preference number: 4 (lower is better)
Translates to: MRSPMVRARSSGWSRELECLEVC*SVATTM
Trigger: CATGGTGGTGGCCACCGACCAGCAGACCTCTAGGCA...CTCCAGCTCCCTGGACCACCCGGATGAGCGGGCCCTCACCATGGGCGACCTCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGACTCACACCTGCCTGTTaGGGAGCCCAGGCCGCCACA +
Preference number: 4 (lower is better)
Translates to: GQPAPATSLPLMEDMWLGLTPAC*GAQAAT
Trigger: TGTGGCGGCCTGGGCTCCCCAACAGGCAGGTGTGAG...TCCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATCTCACACCTGCCTGTTaGGGAGCCCAGGCCGCCACA +
Preference number: 4 (lower is better)
Translates to: DSGCDHRAAQLVAQWILDLTPAC*GAQAAT
Trigger: TGTGGCGGCCTGGGCTCCCCAACAGGCAGGTGTGAG...ATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GGACTGGGGCTGAGGCTTGGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGGCTCTGCCTTTCAGATaGAAGGCCGTTGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: GLGLRLGQWLLASAGWPLALPFR*KAVALT
Trigger: GGTCAAGGCAACGGCCTTCCATCTGAAAGGCAGAGC...CAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp CTGCTGGTCGGTGGCCACCACCATGTAGTGAAGTTCGGCACACTTGGGCCGCCGGGTGGTCCAGGGAGCTaGAGTTGCGGCTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: LLVGGHHHVVKFGTLGPPGGPGS*SCGCLH
Trigger: GTGGAGGCAGCCGCAACTCCAGCTCCCTGGACCACC...CGGCGGCCCAAGTGTGCCGAACTTCACTACATGGTGGTGGCCACCGACCAGCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGAACTGGGGCTGAGGCTTaGCCAGTGGCTGCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: GQPAPATSLPLMEDMWLGTGAEA*PVAARQ
Trigger: CTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGT...TCCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp GGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGATGTCCTCCTTCCGCTTaGACTCCACCACGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GQPAPATSLPLMEDMWLGCPPSA*TPPRRW
Trigger: CCAGCGCCGTGGTGGAGTTCAAGCGGAAGGAGGACA...TCCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR TCA 90 bp GCAAATGAGATGAGGTCGCCCATGGTGAGGGCCCGCTCATCCGGGTGGTCCAGGTGGCGTACTCCACGATaGGGAGGAGCGGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: ANEMRSPMVRARSSGWSRWRTPR*GGAGHP
Trigger: AGGATGGCCCGCTCCTCCTCATCGTGGAGTACGCCA...CCTGGACCACCCGGATGAGCGGGCCCTCACCATGGGCGACCTCATCTCATTTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp CCCACAAGGTCGGCACTCACCCTCCAGGAGCCTGTAGGCCACGCTGATGTTGGGGCCGTGTGCGGTACGTaGCGTAGAGATGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PTRSALTLQEPVGHADVGAVCGT*RRDAGP
Trigger: TGGGCCAGCATCTCTACGGCACGTACCGCACACGGC...CCCAACATCAGCGTGGCCTACAGGCTCCTGGAGGGTGAGTGCCGACCTTGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR GCA 90 bp GGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGAGAGGCACCTGCCTGCCCTTGGCACCAGAGGAATaGAGCTTGTACTGGACGTTG +
Preference number: 4 (lower is better)
Translates to: GQWLLASAGWPLRGTCLPLAPEE*SLYWTL
Trigger: CAACGTCCAGTACAAGCTGCATTCCTCTGGTGCCAA...GGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp ATGAGGTCGCCCATGGTGAGGGCCCGCTCATCCGGGTGGTCCAGGGAGCTGGAGCCACCCCTAGCGTGCTaGAGTTGGCACCAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: MRSPMVRARSSGWSRELEPPLAC*SWHQRN
Trigger: ATTCCTCTGGTGCCAACTGCAGCACGCTAGGGGTGG...CTCCAGCTCCCTGGACCACCCGGATGAGCGGGCCCTCACCATGGGCGACCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp GGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGAGTCCCCCAACAATGCTaGCCCGGAGGCAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GQPAPATSLPLMEDMWLGVPQQC*PGGSPE
Trigger: CTCAGGACTGCCTCCGGGGCAGCATTGTTGGGGGAC...TCCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp GACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATCGTGTCCCCCAACAATaGTGCCCCGGAGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: DSGCDHRAAQLVAQWILDRVPQQ*CPGGSP
Trigger: AGGACTGCCTCCGGGGCAGCATTGTTGGGGGACACG...ATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp GGACTGGGGCTGAGGCTTGGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGATCTCGGCCAGATACTaGATCCCCTGTGAGATCTGC +
Preference number: 4 (lower is better)
Translates to: GLGLRLGQWLLASAGWPLISARY*IPCEIC
Trigger: GCAGATCTCACAGGGGATGCAGTATCTGGCCGAGAT...CAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp TGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCGCGGAGGAAGCCCCGCAGGGATCTCGGCCAGATACTaGATCCCCTGTGAGATCTGC +
Preference number: 4 (lower is better)
Translates to: CPGSQAPLCGSRGGSPAGISARY*IPCEIC
Trigger: GCAGATCTCACAGGGGATGCAGTATCTGGCCGAGAT...CCCTGCGGGGCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCTACCTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCCGCCCGCGGGGAAGGTaGGCGCCGAGTCGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTRPRGR*APSRPR
Trigger: ACGAGGACGACTCGGCGCCCACCTTCCCCGCGGGCG...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CCA 90 bp ACAGCAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCTGACCGGGAAGGCCTaGGCGGGCCTCCGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TAGLAAHSGRRSLSASSRLTGKA*AGLRKV
Trigger: GACCTTCCGGAGGCCCGCCCAGGCCTTCCCGGTCAG...CCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp CGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATGTCTTCGGGCTACTGGGGCTGAGGCTTaGCCAGTGGCTGCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: RSPCGTARRTVDPGCLRATGAEA*PVAARQ
Trigger: CTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGT...AGCCCGAAGACATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR TCA 90 bp GGGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGTCTCCAGGTCTTTGCTaGTGTCCGCAAACACCGGCC +
Preference number: 4 (lower is better)
Translates to: GPASSCNLATPDGGHVAGSPGLC*CPQTPA
Trigger: GGCCGGTGTTTGCGGACATCAGCAAAGACCTGGAGA...CCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp GTTCTCCATGGAGTCCAGCGAGGGCCGGCGGGCACCGGAAGAGGAGTAGCTGACTCTCCAGGTCTTTGCTaGTGTCCGCAAACACCGGCC +
Preference number: 4 (lower is better)
Translates to: VLHGVQRGPAGTGRGVADSPGLC*CPQTPA
Trigger: GGCCGGTGTTTGCGGACATCAGCAAAGACCTGGAGA...GTCAGCTACTCCTCTTCCGGTGCCCGCCGGCCCTCGCTGGACTCCATGGAGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp TGTGGGTGGTTGACCTGCTTCAGGACGTTGAACTCTGACAGCAGGTCTCGCAGCGGCTGGGACTGGGGCTaGGGCTTGGCCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CGWLTCFRTLNSDSRSRSGWDWG*GLASGC
Trigger: GCAGCCACTGGCCAAGCCTCAGCCCCAGTCCCAGCC...GCTGCGAGACCTGCTGTCAGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR GCA 90 bp TTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCCTCGCTGGCACTCAGCGCTGCTaGGCGCCCTGCTTCGGTCGC +
Preference number: 4 (lower is better)
Translates to: FVRLLLPALQHQAVHLLAGTQRC*APCFGR
Trigger: GCGACCGAAGCAGGGCGCGCAGCAGCGCTGAGTGCC...AGCGAGGAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCCCAGGGCCCAGCGCGTaGTCACCTCCAGGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTPGPSA*SPPGCP
Trigger: CGGACAGCCTGGAGGTGAGCACGCGCTGGGCCCTGG...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR GCA 90 bp CAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCCACCCTCTGAGAGGCACCTaGCTGCCCAGGAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: QVSQLTRGGVLFQHLHGHPLRGT*LPRRGL
Trigger: CAGACCCCTCCTGGGCAGGCAGGTGCCTCTCAGAGG...GTGGCCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR CCA 90 bp CTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCGGCCCAGGCGGAAGCTaGGCACCTCCTCAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: LSLWVCAHTPQGSITHASGPGGS*APPQGR
Trigger: ACGCCCCTGAGGAGGTGCCCAGCTTCCGCCTGGGCC...GGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp CAGATGGCTTGTGTCAAGGGCTCGCAGAGCAAGACCAGCAGTAGCAGGCACTGTGGCCCAGGCGGAAGCTaGGCACCTCCTCAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: QMACVKGSQSKTSSSRHCGPGGS*APPQGR
Trigger: ACGCCCCTGAGGAGGTGCCCAGCTTCCGCCTGGGCC...ACAGTGCCTGCTACTGCTGGTCTTGCTCTGCGAGCCCTTGACACAAGCCATCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR CCA 90 bp GAGAAGAGGACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGACTGGTGGAAGGTGCCTaGGGGTCGGTTCTCCCGAAT +
Preference number: 4 (lower is better)
Translates to: EKRTAAAITVRHSSSHSGLVEGA*GSVLPN
Trigger: ATTCGGGAGAACCGACCCCCAGGCACCTTCCACCAG...TCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR CCA 90 bp CAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCCACCTCACACCTGCCTGTTaGGGAGCCCAGGCCGCCACA +
Preference number: 4 (lower is better)
Translates to: QVSQLTRGGVLFQHLHGHLTPAC*GAQAAT
Trigger: TGTGGCGGCCTGGGCTCCCCAACAGGCAGGTGTGAG...GTGGCCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATGTCTTCGCTCGCTGCAGTTGTCTaGCCTCTCCATCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: AAITVRHSSSHSGSWMSSLAAVV*PLHPVA
Trigger: GGCCACCGGATGGAGAGGCCAGACAACTGCAGCGAG...CGAAGACATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp GGCCTGGGCCTGCCTAGAGGTCTGCTGGTCGGTGGCCACCACCATGTAGTGAAGGCCTGTAGGCCACGCTaGTGTTGGGGCACAAGAACT +
Preference number: 4 (lower is better)
Translates to: GLGLPRGLLVGGHHHVVKACRPR*CWGTRT
Trigger: AGTTCTTGTGCCCCAACATCAGCGTGGCCTACAGGC...CTTCACTACATGGTGGTGGCCACCGACCAGCAGACCTCTAGGCAGGCCCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR TCA 90 bp CTCCAGCCGTCTCTTGCTGACTGCACAGGACAGGGGGCAGCCCGCCTCCTCGGCTGGAGAAGTTCCTGGTaGTCCCTTTGCCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: LQPSLADCTGQGAARLLGWRSSW*SLCHLL
Trigger: AAGGAGATGGCAAAGGGATCACCAGGAACTTCTCCA...GCCGAGGAGGCGGGCTGCCCCCTGTCCTGTGCAGTCAGCAAGAGACGGCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp CTTGGGTCTCCACAACATCGCAGTGGCCGTCGGGGCAGGTCTTGGTGCTGGGAGCAGGACGTTGAACTCTaGCAGCAGGTCTCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LGSPQHRSGRRGRSWCWEQDVEL*QQVSQL
Trigger: GAGCTGCGAGACCTGCTGTCAGAGTTCAACGTCCTG...CTCCCAGCACCAAGACCTGCCCCGACGGCCACTGCGATGTTGTGGAGACCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp GGGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGCGGTCTTCAGAAGGTTaGAGAGCCGCTCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GPASSCNLATPDGGHVAGRSSEG*RAAQEE
Trigger: TTCCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCG...CCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp TCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCCCCTGAGAGTTCCGTGCCGGGTGGCCTCTaGGAGGCACCTGCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SHPRSALFNLFLVSPESSVPGGL*EAPACP
Trigger: TGGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCAC...GGAACTCTCAGGGGAGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp CTTCCCAAAAGCTGCCCCCACAAGACTGGAGGAGTGTTGTGCATCTGTGACCACGGTCTGGATGGCGGGTaGGGCGCTCAGTCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: LPKSCPHKTGGVLCICDHGLDGG*GAQSGR
Trigger: GCGGCCAGACTGAGCGCCGCACCCGCCATCCAGACC...GTGGTCACAGATGCACAACACTCCTCCAGTCTTGTGGGGGCAGCTTTTGGGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp TTGATGTCTTGGGTCTCCACAACATCGCAGTGGCCGTCGGGGCAGGTCTTGGTGGCCTGCCTAGAGGTCTaGTGGTCGGTGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: LMSWVSTTSQWPSGQVLVACLEV*WSVATT
Trigger: GGTGGTGGCCACCGACCAGCAGACCTCTAGGCAGGC...CACCAAGACCTGCCCCGACGGCCACTGCGATGTTGTGGAGACCCAAGACATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp CTCCTCACACTCCAGCCGTCTCTTGCTGACTGCACAGGACAGGGGGCAGCCCGCCCTTTGCCATCTCCTTaGCTCCACTCACACCTGCCT +
Preference number: 4 (lower is better)
Translates to: LLTLQPSLADCTGQGAARPLPSP*LHSHLP
Trigger: AGGCAGGTGTGAGTGGAGGCAAGGAGATGGCAAAGG...GCGGGCTGCCCCCTGTCCTGTGCAGTCAGCAAGAGACGGCTGGAGTGTGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp TTGATGTCTTGGGTCTCCACAACATCGCAGTGGCCGTCGGGGCAGGTCTTGGTGCGGCTGCGATCACCGTaGGGCACAGCTCGTCGCACA +
Preference number: 4 (lower is better)
Translates to: LMSWVSTTSQWPSGQVLVRLRSP*GTARRT
Trigger: TGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCG...CACCAAGACCTGCCCCGACGGCCACTGCGATGTTGTGGAGACCCAAGACATCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp CTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCGGCTGTGGGGTGTGCTaGAGGCTGGTGGCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSLWVCAHTPQGSITHASGCGVC*RLVAGG
Trigger: CCCACCTGCCACCAGCCTGCAGCACACCCCACAGCC...GGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GCCGTCGTCATAAATCAGGGAGTCAGATGGAGTGGACGCCGCAAGGTCCAAGTAGGACGCGACGGACACTaGGGGCGCGACGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: AVVINQGVRWSGRRKVQVGRDGH*GRDARS
Trigger: GGAACGTGCGTCGCGCCCCCAGTGTCCGTCGCGTCC...TACTTGGACCTTGCGGCGTCCACTCCATCTGACTCCCTGATTTATGACGACGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp AACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATATCGCCCGTGCGCGCTaGGGCCACGGCTGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: NSPSGCVRTHHKALLHTHIARAR*GHGWRD
Trigger: GTCCCTCCAGCCGTGGCCCCAGCGCGCACGGGCGAT...ATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCTACGCGGGCACAGCCTaGCCACTGGCACTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTYAGTA*PLALAL
Trigger: GAGGGCGAGTGCCAGTGGCCAGGCTGTGCCCGCGTA...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp CTCCACGATGAGGAGGAGCGGGCCATCCTGGCTGCAGGCCCCATACAATTTGATAGCAGGCGGAACTGGTaGAAGGTGCCTGGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: LHDEEERAILAAGPIQFDSRRNW*KVPGGR
Trigger: CCGACCCCCAGGCACCTTCCACCAGTTCCGCCTGCT...ATCAAATTGTATGGGGCCTGCAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR CCA 90 bp GGGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGCTAGCGTGCTGCAGTTaGCACCAGAGGAATGCAGCT +
Preference number: 4 (lower is better)
Translates to: GPASSCNLATPDGGHVAGLACCS*HQRNAA
Trigger: AGCTGCATTCCTCTGGTGCCAACTGCAGCACGCTAG...CCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp ACAGCAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGGAAGTTCGGCACACTTaGGCCGCCGCAGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: TAGLAAHSGRRSLSASSREVRHT*AAAGPW
Trigger: CCAAGGCCCTGCGGCGGCCCAAGTGTGCCGAACTTC...CCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp CTCCTCAGGGAAGCAGTTGCAGGTGCCATAGCCAGCTTTAATCCCCCGGGGCTCACAAGCAGCTGGGCCTaGGCCTGCCTAGAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LLREAVAGAIASFNPPGLTSSWA*ACLEVC
Trigger: GCAGACCTCTAGGCAGGCCCAGGCCCAGCTGCTTGT...GAGCCCCGGGGGATTAAAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GGGAATTCCCACTTTGGATCCTCCAGGATCTTGAAGGCATCCACGGAGACCTGGCTGACCGGGAAGGCCTaGGCGGGCCTCCGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GNSHFGSSRILKASTETWLTGKA*AGLRKV
Trigger: GACCTTCCGGAGGCCCGCCCAGGCCTTCCCGGTCAG...CCAGGTCTCCGTGGATGCCTTCAAGATCCTGGAGGATCCAAAGTGGGAATTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp CGGCCTTTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCGGTGGTCCAGGGAGCTaGAGTTGCGGCTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: RPFVRLLLPALQHQAVHLGGPGS*SCGCLH
Trigger: GTGGAGGCAGCCGCAACTCCAGCTCCCTGGACCACC...GAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp CTCCACGATGAGGAGGAGCGGGCCATCCTGGCTGCAGGCCCCATACAATTTGATGCCCGCTCATCCGGGTaGTCCAGGGAGCTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: LHDEEERAILAAGPIQFDARSSG*SRELEL
Trigger: CAACTCCAGCTCCCTGGACCACCCGGATGAGCGGGC...ATCAAATTGTATGGGGCCTGCAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR CAA 72 bp GTCTCCACAACATCGCAGTGGCCGTCGGGGCAGGTCTaGGTGCTGGGAGAGCAGGTGGAGAAGTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: VSTTSQWPSGQV*VLGEQVEKFLV
Trigger: CACCAGGAACTTCTCCACCTGCTCTCCCAGCACCAAGACCTGCCCCGACGGCCACTGCGATGTTGTGGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
3UTR CAA 72 bp GCCCCGGAGGCAGTCCTGAGGGCAAATGTTGATGTCTaGGGTCTCCACAACATCGCAGTGGCCGTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: APEAVLRANVDV*GLHNIAVAVGA
Trigger: TGCCCCGACGGCCACTGCGATGTTGTGGAGACCCAAGACATCAACATTTGCCCTCAGGACTGCCTCCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp CTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCCCAGCCGTCTCTTGCTaGCTGCACAGGACAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LSLWVCAHTPQGSITHASPAVSC*LHRTGG
Trigger: GCCCCCTGTCCTGTGCAGTCAGCAAGAGACGGCTGG...GGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp GCAAATGAGATGAGGTCGCCCATGGTGAGGGCCCGCTCATCCGGGTGGTCCAGGGATCTGCCAGGCAAATaGGATGAGGTCGCCCATGGT +
Preference number: 4 (lower is better)
Translates to: ANEMRSPMVRARSSGWSRDLPGK*DEVAHG
Trigger: ACCATGGGCGACCTCATCTCATTTGCCTGGCAGATC...CCTGGACCACCCGGATGAGCGGGCCCTCACCATGGGCGACCTCATCTCATTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp CCTGTAGGCCACGCTGATGTTGGGGCACAAGAACTGCACAGGCAGCAGGCGGAACAAGGGCGTGCCGGCTaGCTGGTCCACATACAGCTT +
Preference number: 4 (lower is better)
Translates to: PVGHADVGAQELHRQQAEQGRAG*LVHIQL
Trigger: AAGCTGTATGTGGACCAGGCAGCCGGCACGCCCTTG...TTCCGCCTGCTGCCTGTGCAGTTCTTGTGCCCCAACATCAGCGTGGCCTACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR GCA 90 bp TCTCCCGAATGCGGAAGGAGGGCCTTGTCTCTGGGAAGCAGAGCTCCCGGGGCTTCTCATGCAGCCGTGTaGGGTACGTGCCGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: SPECGRRALSLGSRAPGASHAAV*GTCRRD
Trigger: ATCTCTACGGCACGTACCGCACACGGCTGCATGAGA...AGCCCCGGGAGCTCTGCTTCCCAGAGACAAGGCCCTCCTTCCGCATTCGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR GCA 90 bp TGGGGGTCGGTTCTCCCGAATGCGGAAGGAGGGCCTTGTCTCTGGGAAGCAGAGGTCGGTTCTCCCGAATaGGGAAGGAGGGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: WGSVLPNAEGGPCLWEAEVGSPE*GRRALS
Trigger: AGACAAGGCCCTCCTTCCGCATTCGGGAGAACCGAC...CTCTGCTTCCCAGAGACAAGGCCCTCCTTCCGCATTCGGGAGAACCGACCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR GCA 90 bp TGGGCCCGGGGGACAAATGTGTCTTGTGAGCCCTCTTCCCTGATACCACCATCCACCAGCACCGCCAGCTaGATGGTGCGGTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: WARGTNVSCEPSSLIPPSTSTAS*MVRFSE
Trigger: CTCGGAGAACCGCACCATGCAGCTGGCGGTGCTGGT...GGATGGTGGTATCAGGGAAGAGGGCTCACAAGACACATTTGTCCCCCGGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp CTTCTCCTCCTCAGGGAAGCAGTTGCAGGTGCCATAGCCAGCTTTAATCCCCCGAGCTGGGCCTGGGCCTaGCTAGAGGTCTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: LLLLREAVAGAIASFNPPSWAWA*LEVCWS
Trigger: CGACCAGCAGACCTCTAGGCAGGCCCAGGCCCAGCT...CGGGGGATTAAAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGGAGGAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp ACAGCAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCGGGGCAGGTCTTGGTaGTGGGAGAGCAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: TAGLAAHSGRRSLSASSRRGRSW*WESRWR
Trigger: TCTCCACCTGCTCTCCCAGCACCAAGACCTGCCCCG...CCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCCGGCTGCGATCACCGTaGGGCACAGCTCGTCGCACA +
Preference number: 4 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTRLRSP*GTARRT
Trigger: TGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCG...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp CTCCACGATGAGGAGGAGCGGGCCATCCTGGCTGCAGGCCCCATACAATTTGATGAAGAGGACAGCGGCTaGGATCACCGTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: LHDEEERAILAAGPIQFDEEDSG*DHRAAQ
Trigger: CTGTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTC...ATCAAATTGTATGGGGCCTGCAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp CACCTGGGAACTGAACACGGCTCGGCCAATGTGACGTTCACAAAGAAAGGGCCGAGCCAGGCCCCACTTTaGGGCTCTCGCGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: HLGTEHGSANVTFTKKGPSQAPL*GSRGGS
Trigger: GCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCT...CGGCCCTTTCTTTGTGAACGTCACATTGGCCGAGCCGTGTTCAGTTCCCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GGGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGTCCTGCTTCCAGCATTaGAGCATCAGGCGGTACATC +
Preference number: 4 (lower is better)
Translates to: GPASSCNLATPDGGHVAGSCFQH*SIRRYI
Trigger: GATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGA...CCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCCCTCTGAGAGGCACCTaGCTGCCCAGGAGGGGTCTG +
Preference number: 4 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTPLRGT*LPRRGL
Trigger: CAGACCCCTCCTGGGCAGGCAGGTGCCTCTCAGAGG...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp CTCCACGATGAGGAGGAGCGGGCCATCCTGGCTGCAGGCCCCATACAATTTGATGGCGTGCCGGCTGCCTaGTCCACATACAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LHDEEERAILAAGPIQFDGVPAA*STYSFS
Trigger: GGAGAAGCTGTATGTGGACCAGGCAGCCGGCACGCC...ATCAAATTGTATGGGGCCTGCAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR CCA 90 bp CAGATGGCTTGTGTCAAGGGCTCGCAGAGCAAGACCAGCAGTAGCAGGCACTGTGCACAGCCTGGCCACTaGCACTCGCCCTCACGAAGG +
Preference number: 4 (lower is better)
Translates to: QMACVKGSQSKTSSSRHCAQPGH*HSPSRR
Trigger: CCTTCGTGAGGGCGAGTGCCAGTGGCCAGGCTGTGC...ACAGTGCCTGCTACTGCTGGTCTTGCTCTGCGAGCCCTTGACACAAGCCATCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR CCA 90 bp ATGCAGAAGGCAGACAGCAGCACCGAGACGATGAAGGAGAAGAGGACAGCGGCTGGAGGGCCTTGTCTCTaGGAAGCAGAGCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: MQKADSSTETMKEKRTAAGGPCL*EAELPG
Trigger: CCCCGGGAGCTCTGCTTCCCAGAGACAAGGCCCTCC...AGCCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCTGCTGTCTGCCTTCTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR CCA 90 bp GGTGTTGAAGAAGGAGAAGTATACGCGGGCACAGCCTGGCCACTGGCACTCGCCCTGGTGGAAGGTGCCTaGGGGTCGGTTCTCCCGAAT +
Preference number: 4 (lower is better)
Translates to: GVEEGEVYAGTAWPLALALVEGA*GSVLPN
Trigger: ATTCGGGAGAACCGACCCCCAGGCACCTTCCACCAG...GGCGAGTGCCAGTGGCCAGGCTGTGCCCGCGTATACTTCTCCTTCTTCAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR CCA 90 bp CAGATGGCTTGTGTCAAGGGCTCGCAGAGCAAGACCAGCAGTAGCAGGCACTGTGGCAGCAGGCGGAACTaGTGGAAGGTGCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: QMACVKGSQSKTSSSRHCGSRRN*WKVPGG
Trigger: ACCCCCAGGCACCTTCCACCAGTTCCGCCTGCTGCC...ACAGTGCCTGCTACTGCTGGTCTTGCTCTGCGAGCCCTTGACACAAGCCATCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR CCA 90 bp CTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCGAAGTTCGGCACACTTaGGCCGCCGCAGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LSLWVCAHTPQGSITHASEVRHT*AAAGPW
Trigger: CCAAGGCCCTGCGGCGGCCCAAGTGTGCCGAACTTC...GGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCCTCGCTGCAGTTGACAAGCAGCTGGGCCTaGGCCTGCCTAGAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GSCFQHCSIRRYISSLQLTSSWA*ACLEVC
Trigger: GCAGACCTCTAGGCAGGCCCAGGCCCAGCTGCTTGT...CAACTGCAGCGAGGAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp TGTGGGTGGTTGACCTGCTTCAGGACGTTGAACTCTGACAGCAGGTCTCGCAGCCGTCGGGGCAGGTCTTaGTGCTGGGAGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: CGWLTCFRTLNSDSRSRSRRGRS*CWESRW
Trigger: CCACCTGCTCTCCCAGCACCAAGACCTGCCCCGACG...GCTGCGAGACCTGCTGTCAGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GAGAAGAGGACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGAGCTCTGCCTTTCAGATaGAAGGCCGTTGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: EKRTAAAITVRHSSSHSGALPFR*KAVALT
Trigger: GGTCAAGGCAACGGCCTTCCATCTGAAAGGCAGAGC...TCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp CTGCTGGTCGGTGGCCACCACCATGTAGTGAAGTTCGGCACACTTGGGCCGCCGGCTCTGCCTTTCAGATaGAAGGCCGTTGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: LLVGGHHHVVKFGTLGPPALPFR*KAVALT
Trigger: GGTCAAGGCAACGGCCTTCCATCTGAAAGGCAGAGC...CGGCGGCCCAAGTGTGCCGAACTTCACTACATGGTGGTGGCCACCGACCAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp CTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCCACCGTGGTGTACCCTGCTGGCCTCTCCATCCGGTaGCCGGTCTTCAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: LGEAFSFSIFTATVVYPAGLSIR*PVFRRL
Trigger: CAACCTTCTGAAGACCGGCCACCGGATGGAGAGGCC...AGCAGGGTACACCACGGTGGCCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp GGGAATTCCCACTTTGGATCCTCCAGGATCTTGAAGGCATCCACGGAGACCTGGCCAGCCGTCTCTTGCTaGCTGCACAGGACAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GNSHFGSSRILKASTETWPAVSC*LHRTGG
Trigger: GCCCCCTGTCCTGTGCAGTCAGCAAGAGACGGCTGG...CCAGGTCTCCGTGGATGCCTTCAAGATCCTGGAGGATCCAAAGTGGGAATTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp CTCCACGATGAGGAGGAGCGGGCCATCCTGGCTGCAGGCCCCATACAATTTGATGCAGCACCGAGACGATaGAGGAGAAGAGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: LHDEEERAILAAGPIQFDAAPRR*RRRGQR
Trigger: CCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCTGC...ATCAAATTGTATGGGGCCTGCAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp TGGCCTCTCCATCCGGTGGCCGGTCTTCAGAAGGTTGAAGAGCCGCTCAGGAGGGAAGGTCATCTCAGCTaGGGAGATGGGTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: WPLHPVAGLQKVEEPLRREGHLS*GDGWLV
Trigger: CACAAGCCACCCATCTCCTCAGCTGAGATGACCTTC...CCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCGGCCACCGGATGGAGAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp GCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATGTCTTCGGATCCTCCAGGATCTTaGAGGCATCCACGGAGACCT +
Preference number: 4 (lower is better)
Translates to: AAITVRHSSSHSGSWMSSDPPGS*RHPRRP
Trigger: AGGTCTCCGTGGATGCCTTCAAGATCCTGGAGGATC...CGAAGACATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp CTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCTGGCGTACTCCACGATaGGGAGGAGCGGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: LSLWVCAHTPQGSITHASWRTPR*GGAGHP
Trigger: AGGATGGCCCGCTCCTCCTCATCGTGGAGTACGCCA...GGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp ACAGCAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGGCTGCCAAGTCCCGATaGACGAGCTTCATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: TAGLAAHSGRRSLSASSRAAKSR*TSFISA
Trigger: GGCCGAGATGAAGCTCGTTCATCGGGACTTGGCAGC...CCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp TGGGGGTCGGTTCTCCCGAATGCGGAAGGAGGGCCTTGTCTCTGGGAAGCAGAGCCACATTGCGGACACTaGGCTTCTCCCAGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: WGSVLPNAEGGPCLWEAEPHCGH*ASPRSY
Trigger: ATAGCTCCTGGGAGAAGCTCAGTGTCCGCAATGTGG...CTCTGCTTCCCAGAGACAAGGCCCTCCTTCCGCATTCGGGAGAACCGACCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR GCA 90 bp AGGCAGCAGGCGGAACTGGTGGAAGGTGCCTGGGGGTCGGTTCTCCCGAATGCGCGGTGTCCTCCTGGATaGAGATCCAGTTGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: RQQAELVEGAWGSVLPNARCPPG*RSSCSH
Trigger: ATGAGAACAACTGGATCTGCATCCAGGAGGACACCG...CGCATTCGGGAGAACCGACCCCCAGGCACCTTCCACCAGTTCCGCCTGCTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR GCA 90 bp CCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCATCGGCGAGCCCTCCTaGTCACGGAGAGGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: PSGCVRTHHKALLHTHPSIGEPS*SRRGSR
Trigger: CCTACTCCCTCTCCGTGAGCAGGAGGGCTCGCCGAT...GCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GGGAATTCCCACTTTGGATCCTCCAGGATCTTGAAGGCATCCACGGAGACCTGGCGGCTGCGATCACCGTaGGGCACAGCTCGTCGCACA +
Preference number: 4 (lower is better)
Translates to: GNSHFGSSRILKASTETWRLRSP*GTARRT
Trigger: TGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCG...CCAGGTCTCCGTGGATGCCTTCAAGATCCTGGAGGATCCAAAGTGGGAATTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp GACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATCACCGTGGTGTACCCTaGTCTGCCTTTCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: DSGCDHRAAQLVAQWILDHRGVP*SAFQME
Trigger: TTCCATCTGAAAGGCAGAGCAGGGTACACCACGGTG...ATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp TCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCCCCTGAGAGTTCCAGCCAGGCCCCACTTTaGGGCTCTCGCGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SHPRSALFNLFLVSPESSSQAPL*GSRGGS
Trigger: GCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCT...GGAACTCTCAGGGGAGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp GAGAAGAGGACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGACAGGATGTTTCTGGCTaGCAAGTCCCGATGAACGAG +
Preference number: 4 (lower is better)
Translates to: EKRTAAAITVRHSSSHSGQDVSG*QVPMNE
Trigger: CTCGTTCATCGGGACTTGGCAGCCAGAAACATCCTG...TCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp GCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATGTCTTCGGGTACATCTCCTCGCTaGAGTTGTCTGGCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: AAITVRHSSSHSGSWMSSGTSPR*SCLASP
Trigger: TGGAGAGGCCAGACAACTGCAGCGAGGAGATGTACC...CGAAGACATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp CCTGTAGGCCACGCTGATGTTGGGGCACAAGAACTGCACAGGCAGCAGGCGGAAGGGAAAGCCGCGGTCTaGAGAGAGAAGTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PVGHADVGAQELHRQQAEGKAAV*REKSGL
Trigger: CAGACCTGACTTCTCTCTGCAGACCGCGGCTTTCCC...TTCCGCCTGCTGCCTGTGCAGTTCTTGTGCCCCAACATCAGCGTGGCCTACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR CCA 90 bp GGCTGGAAAGGAGGTGTTGAAGAAGGAGAAGTATACGCGGGCACAGCCTGGCCAGGCGTGCCGGCTGCCTaGTCCACATACAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GWKGGVEEGEVYAGTAWPGVPAA*STYSFS
Trigger: GGAGAAGCTGTATGTGGACCAGGCAGCCGGCACGCC...TGGCCAGGCTGTGCCCGCGTATACTTCTCCTTCTTCAACACCTCCTTTCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR CCA 90 bp AACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATTACGCGGGCACAGCCTaGCCACTGGCACTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: NSPSGCVRTHHKALLHTHYAGTA*PLALAL
Trigger: GAGGGCGAGTGCCAGTGGCCAGGCTGTGCCCGCGTA...ATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp CCCACAAGGTCGGCACTCACCCTCCAGGAGCCTGTAGGCCACGCTGATGTTGGGGAGGGAGCTGCAGGCTaGAAAGGAGGTGTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: PTRSALTLQEPVGHADVGEGAAG*KGGVEE
Trigger: TTCTTCAACACCTCCTTTCCAGCCTGCAGCTCCCTC...CCCAACATCAGCGTGGCCTACAGGCTCCTGGAGGGTGAGTGCCGACCTTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR CCA 90 bp CTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCACAAGCAGCTGGGCCTaGGCCTGCCTAGAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LSLWVCAHTPQGSITHASTSSWA*ACLEVC
Trigger: GCAGACCTCTAGGCAGGCCCAGGCCCAGCTGCTTGT...GGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GAACGAGCTTCATCTCGGCCAGATACTGCATCCCCTGTGAGATCTGCCAGGCAACGTCGGGGCAGGTCTTaGTGCTGGGAGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ERASSRPDTASPVRSARQRRGRS*CWESRW
Trigger: CCACCTGCTCTCCCAGCACCAAGACCTGCCCCGACG...TTGCCTGGCAGATCTCACAGGGGATGCAGTATCTGGCCGAGATGAAGCTCGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp ACAGCAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGTCCACAACATCGCAGTaGCCGTCGGGGCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TAGLAAHSGRRSLSASSRSTTSQ*PSGQVL
Trigger: CAAGACCTGCCCCGACGGCCACTGCGATGTTGTGGA...CCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp TTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCCTCGCTAGACCTGGTTCTCCATaGAGTCCAGCGAGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: FVRLLLPALQHQAVHLLARPGSP*SPARAG
Trigger: GCCGGCCCTCGCTGGACTCCATGGAGAACCAGGTCT...AGCGAGGAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GCAGAAGGCAGACAGCAGCACCGAGACGATGAAGGAGAAGAGGACAGCGGCTGCGCATCCACGGAGACCTaGTTCTCCATGGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: AEGRQQHRDDEGEEDSGCASTET*FSMESS
Trigger: GCTGGACTCCATGGAGAACCAGGTCTCCGTGGATGC...GCAGCCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCTGCTGTCTGCCTTCTGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp CTTCCCAAAAGCTGCCCCCACAAGACTGGAGGAGTGTTGTGCATCTGTGACCACGCCCGCTCATCCGGGTaGTCCAGGGAGCTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: LPKSCPHKTGGVLCICDHARSSG*SRELEL
Trigger: CAACTCCAGCTCCCTGGACCACCCGGATGAGCGGGC...GTGGTCACAGATGCACAACACTCCTCCAGTCTTGTGGGGGCAGCTTTTGGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCCTCGCTGCAGTTGGGCCTCTCCATCCGGTaGCCGGTCTTCAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: GSCFQHCSIRRYISSLQLGLSIR*PVFRRL
Trigger: CAACCTTCTGAAGACCGGCCACCGGATGGAGAGGCC...CAACTGCAGCGAGGAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp CTTCTCCTCCTCAGGGAAGCAGTTGCAGGTGCCATAGCCAGCTTTAATCCCCCGCTCGCTGCAGTTGTCTaGCCTCTCCATCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LLLLREAVAGAIASFNPPLAAVV*PLHPVA
Trigger: GGCCACCGGATGGAGAGGCCAGACAACTGCAGCGAG...CGGGGGATTAAAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGGAGGAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp ACAGCAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCTGATGGAGGACATGTaGCTGGGACTGGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TAGLAAHSGRRSLSASSRLMEDM*LGLGLR
Trigger: CCTCAGCCCCAGTCCCAGCCACATGTCCTCCATCAG...CCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671844.1
3UTR CAA 72 bp CTAACAGGTAGGATGAGCCACTGCTTTCGCCTCTACTaGGCTGTGGGGTGTGCTGCAGGCTGGTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LTGRMSHCFRLY*AVGCAAGWWQV
Trigger: CACCTGCCACCAGCCTGCAGCACACCCCACAGCCAAGTAGAGGCGAAAGCAGTGGCTCATCCTACCTGTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355710.8
ENST00000615310.4
3UTR CAA 72 bp CATTGCAGCATCAGGCGGTACATCTCCTCGCTGCAGTaGTCTGGCCTCTCCATCCGGTGGCCGGTCTTCAGA +
Preference number: 4 (lower is better)
Translates to: HCSIRRYISSLQ*SGLSIRWPVFR
Trigger: TCTGAAGACCGGCCACCGGATGGAGAGGCCAGACAACTGCAGCGAGGAGATGTACCGCCTGATGCTGCAATG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCGCAGCACCGACACGTTaGAGTGGAGCAAGAGGACGC +
Preference number: 4 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTAAPTR*SGARGR
Trigger: GCGTCCTCTTGCTCCACTTCAACGTGTCGGTGCTGC...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR TCA 90 bp GGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGACCTGAGGGCAAATGTTaGTGTCTTGGGTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: GQPAPATSLPLMEDMWLGPEGKC*CLGSPQ
Trigger: TTGTGGAGACCCAAGACATCAACATTTGCCCTCAGG...TCCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp GCAGAAGGCAGACAGCAGCACCGAGACGATGAAGGAGAAGAGGACAGCGGCTGCGATCCTCCAGGATCTTaGAGGCATCCACGGAGACCT +
Preference number: 4 (lower is better)
Translates to: AEGRQQHRDDEGEEDSGCDPPGS*RHPRRP
Trigger: AGGTCTCCGTGGATGCCTTCAAGATCCTGGAGGATC...GCAGCCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCTGCTGTCTGCCTTCTGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp AGCACCGAGACGATGAAGGAGAAGAGGACAGCGGCTGCGATCACCGTGCGGCACGGAAGGCCGTTGCCTTaGCCACTTTTCCAAATTCGC +
Preference number: 4 (lower is better)
Translates to: STETMKEKRTAAAITVRHGRPLP*PLFQIR
Trigger: GCGAATTTGGAAAAGTGGTCAAGGCAACGGCCTTCC...GTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp ACAGCAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCAGGACGTTGAACTCTaGCAGCAGGTCTCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: TAGLAAHSGRRSLSASSRQDVEL*QQVSQL
Trigger: GAGCTGCGAGACCTGCTGTCAGAGTTCAACGTCCTG...CCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp CCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCGCTGCCAAGTCCCGATaGACGAGCTTCATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: PSGCVRTHHKALLHTHPSAAKSR*TSFISA
Trigger: GGCCGAGATGAAGCTCGTTCATCGGGACTTGGCAGC...GCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp TCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACCGGGGCACTCAGCGCTGCTaGGCGCCCTGCTTCGGTCGC +
Preference number: 4 (lower is better)
Translates to: SPLNHHLLQVFADVRKHRGTQRC*APCFGR
Trigger: GCGACCGAAGCAGGGCGCGCAGCAGCGCTGAGTGCC...CCGGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp AATCCGACCCTGGCTCCTCTTCACGTAGGAATCCTCTTCATAAACATCTCGGGAGGTCTGGATGGCGGGTaGGGCGCTCAGTCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: NPTLAPLHVGILFINISGGLDGG*GAQSGR
Trigger: GCGGCCAGACTGAGCGCCGCACCCGCCATCCAGACC...TCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGCCAGGGTCGGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp TCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCCCCTGAGAGTTCCGCCGTGTGCGGTACGTaGCGTAGAGATGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SHPRSALFNLFLVSPESSAVCGT*RRDAGP
Trigger: TGGGCCAGCATCTCTACGGCACGTACCGCACACGGC...GGAACTCTCAGGGGAGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp CTGCTGGTCGGTGGCCACCACCATGTAGTGAAGTTCGGCACACTTGGGCCGCCGCGGTGTCCTCCTGGATaGAGATCCAGTTGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LLVGGHHHVVKFGTLGPPRCPPG*RSSCSH
Trigger: ATGAGAACAACTGGATCTGCATCCAGGAGGACACCG...CGGCGGCCCAAGTGTGCCGAACTTCACTACATGGTGGTGGCCACCGACCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR GCA 90 bp CTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCCACCGTGGTGTACCCTGCTCCTTTGCCATCTCCTTaGCTCCACTCACACCTGCCT +
Preference number: 4 (lower is better)
Translates to: LGEAFSFSIFTATVVYPAPLPSP*LHSHLP
Trigger: AGGCAGGTGTGAGTGGAGGCAAGGAGATGGCAAAGG...AGCAGGGTACACCACGGTGGCCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp GAACGAGCTTCATCTCGGCCAGATACTGCATCCCCTGTGAGATCTGCCAGGCAAGTCCCCCAACAATGCTaGCCCGGAGGCAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ERASSRPDTASPVRSARQVPQQC*PGGSPE
Trigger: CTCAGGACTGCCTCCGGGGCAGCATTGTTGGGGGAC...TTGCCTGGCAGATCTCACAGGGGATGCAGTATCTGGCCGAGATGAAGCTCGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp CAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCCACCCTCAGGGAAGCAGTTaGAGGTGCCATAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: QVSQLTRGGVLFQHLHGHPQGSS*RCHSQL
Trigger: AAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGG...GTGGCCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp GGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGATGTGGGTGGTTGACCTaGTTCAGGACGTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: GQPAPATSLPLMEDMWLGCGWLT*FRTLNS
Trigger: AGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACA...TCCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp GACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATTGTGGGTGGTTGACCTaGTTCAGGACGTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: DSGCDHRAAQLVAQWILDCGWLT*FRTLNS
Trigger: AGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACA...ATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp AATCAGGGAGTCAGATGGAGTGGACGCCGCAAGGTCCAAGTAGTCTCTCCTCTTAGCCAGGCCCCACTTTaGGGCTCTCGCGGAGGAAGC +
Preference number: 4 (lower is better)
Translates to: NQGVRWSGRRKVQVVSPLSQAPL*GSRGGS
Trigger: GCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCT...AAGAGGAGAGACTACTTGGACCTTGCGGCGTCCACTCCATCTGACTCCCTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp CTCCAGGAGCCTGTAGGCCACGCTGATGTTGGGGCACAAGAACTGCACAGGCAGAGGCCGGTGTCCTCCTaGATGCAGATCCAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LQEPVGHADVGAQELHRQRPVSS*MQIQLF
Trigger: GAACAACTGGATCTGCATCCAGGAGGACACCGGCCT...CTGCCTGTGCAGTTCTTGTGCCCCAACATCAGCGTGGCCTACAGGCTCCTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR CCA 90 bp CTCCTCAGGGAAGCAGTTGCAGGTGCCATAGCCAGCTTTAATCCCCCGGGGCTCAGGCCGGTGTCCTCCTaGATGCAGATCCAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LLREAVAGAIASFNPPGLRPVSS*MQIQLF
Trigger: GAACAACTGGATCTGCATCCAGGAGGACACCGGCCT...GAGCCCCGGGGGATTAAAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR CCA 90 bp AACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATGCACAGCCTGGCCACTaGCACTCGCCCTCACGAAGG +
Preference number: 4 (lower is better)
Translates to: NSPSGCVRTHHKALLHTHAQPGH*HSPSRR
Trigger: CCTTCGTGAGGGCGAGTGCCAGTGGCCAGGCTGTGC...ATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCCTGGTGGAAGGTGCCTaGGGGTCGGTTCTCCCGAAT +
Preference number: 4 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTLVEGA*GSVLPN
Trigger: ATTCGGGAGAACCGACCCCCAGGCACCTTCCACCAG...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACAAACCTGTTGCAGACCCGGAAGGTCTGCTaGGCCCAGGTGTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GQLFRPGVLTLLRTNLLQTRKVC*AQVSPG
Trigger: CCCCGGGGACACCTGGGCCCAGCAGACCTTCCGGGT...CTGCAACAGGTTTGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp CTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCCCCGCTCCTGGGCCCTaGAAGTCTGAGTCATTGACC +
Preference number: 4 (lower is better)
Translates to: LSLWVCAHTPQGSITHASPAPGP*KSESLT
Trigger: GGTCAATGACTCAGACTTCCAGGGCCCAGGAGCGGG...GGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp CTCCTCAGGGAAGCAGTTGCAGGTGCCATAGCCAGCTTTAATCCCCCGGGGCTCCTAGCGTGCTGCAGTTaGCACCAGAGGAATGCAGCT +
Preference number: 4 (lower is better)
Translates to: LLREAVAGAIASFNPPGLLACCS*HQRNAA
Trigger: AGCTGCATTCCTCTGGTGCCAACTGCAGCACGCTAG...GAGCCCCGGGGGATTAAAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp CAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCCACCTAGCGTGCTGCAGTTaGCACCAGAGGAATGCAGCT +
Preference number: 4 (lower is better)
Translates to: QVSQLTRGGVLFQHLHGHLACCS*HQRNAA
Trigger: AGCTGCATTCCTCTGGTGCCAACTGCAGCACGCTAG...GTGGCCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCTGCCTAGAGGTCTGCTaGTCGGTGGCCACCACCATG +
Preference number: 4 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTCLEVC*SVATTM
Trigger: CATGGTGGTGGCCACCGACCAGCAGACCTCTAGGCA...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp CCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCTGCCTAGAGGTCTGCTaGTCGGTGGCCACCACCATG +
Preference number: 4 (lower is better)
Translates to: PSGCVRTHHKALLHTHPSCLEVC*SVATTM
Trigger: CATGGTGGTGGCCACCGACCAGCAGACCTCTAGGCA...GCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp TCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCCTTCTCACACCTGCCTGTTaGGGAGCCCAGGCCGCCACA +
Preference number: 4 (lower is better)
Translates to: SGCVRTHHKALLHTHPSLLTPAC*GAQAAT
Trigger: TGTGGCGGCCTGGGCTCCCCAACAGGCAGGTGTGAG...AAGGCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGATTGATGACATGTGGGTaGTTGACCTGCTTCAGGACG +
Preference number: 4 (lower is better)
Translates to: GQPAPATSLPLMEDMWLGLMTCG*LTCFRT
Trigger: CGTCCTGAAGCAGGTCAACCACCCACATGTCATCAA...TCCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp TGTGGGTGGTTGACCTGCTTCAGGACGTTGAACTCTGACAGCAGGTCTCGCAGCAGGAGCGGGCCATCCTaGCTGCAGGCCCCATACAAT +
Preference number: 4 (lower is better)
Translates to: CGWLTCFRTLNSDSRSRSRSGPS*LQAPYN
Trigger: ATTGTATGGGGCCTGCAGCCAGGATGGCCCGCTCCT...GCTGCGAGACCTGCTGTCAGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp AAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCAGGTGGTCCAGGGAGCTaGAGTTGCGGCTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: KLSLWVCAHTPQGSITHAGGPGS*SCGCLH
Trigger: GTGGAGGCAGCCGCAACTCCAGCTCCCTGGACCACC...TGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GGCCTGGGCCTGCCTAGAGGTCTGCTGGTCGGTGGCCACCACCATGTAGTGAAGTGCCATCCATTTAACTaGAATCCGACCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GLGLPRGLLVGGHHHVVKCHPFN*NPTLAP
Trigger: AGGAGCCAGGGTCGGATTCCAGTTAAATGGATGGCA...CTTCACTACATGGTGGTGGCCACCGACCAGCAGACCTCTAGGCAGGCCCAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCGGCCTCTCCATCCGGTaGCCGGTCTTCAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTGLSIR*PVFRRL
Trigger: CAACCTTCTGAAGACCGGCCACCGGATGGAGAGGCC...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp TGGGCCCGGGGGACAAATGTGTCTTGTGAGCCCTCTTCCCTGATACCACCATCCCAGGCTGGTGGCAGGTaGGATTCACAGCAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: WARGTNVSCEPSSLIPPSQAGGR*DSQQQS
Trigger: GCTTTGCTGCTGTGAATCCCACCTGCCACCAGCCTG...GGATGGTGGTATCAGGGAAGAGGGCTCACAAGACACATTTGTCCCCCGGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp CACCTGGGAACTGAACACGGCTCGGCCAATGTGACGTTCACAAAGAAAGGGCCGGCCTCTACTTGGCTGTaGGGTGTGCTGCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: HLGTEHGSANVTFTKKGPASTWL*GVLQAG
Trigger: ACCAGCCTGCAGCACACCCCACAGCCAAGTAGAGGC...CGGCCCTTTCTTTGTGAACGTCACATTGGCCGAGCCGTGTTCAGTTCCCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp TCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCCCCTGAGAGTTCCCGCGGTTGCGGACACTaGGCTTCTCCCAGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: SHPRSALFNLFLVSPESSRGCGH*ASPRSY
Trigger: ATAGCTCCTGGGAGAAGCTCAGTGTCCGCAACCGCG...GGAACTCTCAGGGGAGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCGGAAGTCTGAGTCATTaGCCAGCACCGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTGSLSH*PAPPAA
Trigger: TGCAGCTGGCGGTGCTGGTCAATGACTCAGACTTCC...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR TCA 90 bp TCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCCCCTGAGAGTTCCTGGGCCCTGGAAGTCTaGGTCATTGACCAGCACCGC +
Preference number: 4 (lower is better)
Translates to: SHPRSALFNLFLVSPESSWALEV*VIDQHR
Trigger: GCGGTGCTGGTCAATGACTCAGACTTCCAGGGCCCA...GGAACTCTCAGGGGAGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR TCA 90 bp CTCCACGATGAGGAGGAGCGGGCCATCCTGGCTGCAGGCCCCATACAATTTGATCGGTCTTCAGAAGGTTaGAGAGCCGCTCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LHDEEERAILAAGPIQFDRSSEG*RAAQEE
Trigger: TTCCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCG...ATCAAATTGTATGGGGCCTGCAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCTCTCCAGGTCTTTGCTaGTGTCCGCAAACACCGGCC +
Preference number: 4 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTSPGLC*CPQTPA
Trigger: GGCCGGTGTTTGCGGACATCAGCAAAGACCTGGAGA...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp TGGGCCCGGGGGACAAATGTGTCTTGTGAGCCCTCTTCCCTGATACCACCATCCTGCCATCAGCTCTCGTaGGTGGTACAGGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: WARGTNVSCEPSSLIPPSCHQLS*VVQDSL
Trigger: GAGAGAGTCCTGTACCACTCACGAGAGCTGATGGCA...GGATGGTGGTATCAGGGAAGAGGGCTCACAAGACACATTTGTCCCCCGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp AATTCTGGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCACTCAGCGCTGCTaGGCGCCCTGCTTCGGTCGC +
Preference number: 4 (lower is better)
Translates to: NSGTPTAPFLHTVLIRGSGTQRC*APCFGR
Trigger: GCGACCGAAGCAGGGCGCGCAGCAGCGCTGAGTGCC...ACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GGGAATTCCCACTTTGGATCCTCCAGGATCTTGAAGGCATCCACGGAGACCTGGGGCCCAATGCCACTTTaGCTAGCAGCGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GNSHFGSSRILKASTETWGPMPL*LAAAAA
Trigger: TGCTGCTGCCGCTGCTAGGCAAAGTGGCATTGGGCC...CCAGGTCTCCGTGGATGCCTTCAAGATCCTGGAGGATCCAAAGTGGGAATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR GCA 90 bp ACAGCAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGTCTCATGCAGCCGTGTaGGGTACGTGCCGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: TAGLAAHSGRRSLSASSRSHAAV*GTCRRD
Trigger: ATCTCTACGGCACGTACCGCACACGGCTGCATGAGA...CCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR GCA 90 bp TGGGCCCGGGGGACAAATGTGTCTTGTGAGCCCTCTTCCCTGATACCACCATCCTGCAGGTACCACGTCTaGATCGAAGACACGCAGCGT +
Preference number: 4 (lower is better)
Translates to: WARGTNVSCEPSSLIPPSCRYHV*IEDTQR
Trigger: ACGCTGCGTGTCTTCGATGCAGACGTGGTACCTGCA...GGATGGTGGTATCAGGGAAGAGGGCTCACAAGACACATTTGTCCCCCGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGAGTTGATGCCACTGAATaGCTGGCAGTTTTCCACACA +
Preference number: 4 (lower is better)
Translates to: GQPAPATSLPLMEDMWLGVDATE*LAVFHT
Trigger: TGTGTGGAAAACTGCCAGGCATTCAGTGGCATCAAC...TCCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp AGGGAGCCGTATTTGGCGTACTCCACGATGAGGAGGAGCGGGCCATCCTGGCTGTTGGCACCAGAGGAATaGAGCTTGTACTGGACGTTG +
Preference number: 4 (lower is better)
Translates to: REPYLAYSTMRRSGPSWLLAPEE*SLYWTL
Trigger: CAACGTCCAGTACAAGCTGCATTCCTCTGGTGCCAA...CAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAGTACGCCAAATACGGCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCCCACCCCTAGCGTGCTaGAGTTGGCACCAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTPPLAC*SWHQRN
Trigger: ATTCCTCTGGTGCCAACTGCAGCACGCTAGGGGTGG...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp GAACACAGAATGTTGGTGGTCACTGATGGACACAGACCAACACTGGGTGCTGCTGCCTGCCTAGAGGTCTaGTGGTCGGTGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: EHRMLVVTDGHRPTLGAAACLEV*WSVATT
Trigger: GGTGGTGGCCACCGACCAGCAGACCTCTAGGCAGGC...AGCAGCACCCAGTGTTGGTCTGTGTCCATCAGTGACCACCAACATTCTGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp CAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGACCGTCTCTTGCTGACTaGACAGGACAGGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: QPPFFILFSSGVVAAQYRPSLAD*TGQGAA
Trigger: GGCTGCCCCCTGTCCTGTGCAGTCAGCAAGAGACGG...TCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp ACGAGCTTCATCTCGGCCAGATACTGCATCCCCTGTGAGATCTGCCAGGCAAATCCGTCTCTTGCTGACTaGACAGGACAGGGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: TSFISARYCIPCEICQANPSLAD*TGQGAA
Trigger: GGCTGCCCCCTGTCCTGTGCAGTCAGCAAGAGACGG...ATTTGCCTGGCAGATCTCACAGGGGATGCAGTATCTGGCCGAGATGAAGCTCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp AACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCGGGGCAGGTCTTGGTaGTGGGAGAGCAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: NSPSGCVRTHHKALLHTHRGRSW*WESRWR
Trigger: TCTCCACCTGCTCTCCCAGCACCAAGACCTGCCCCG...ATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp CAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGACGTGTCCCCCAACAATaGTGCCCCGGAGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: QPPFFILFSSGVVAAQYRRVPQQ*CPGGSP
Trigger: AGGACTGCCTCCGGGGCAGCATTGTTGGGGGACACG...TCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GAGAAGAGGACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGACAGATGGAAGGCCGTTaGCTTGACCACTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: EKRTAAAITVRHSSSHSGQMEGR*LDHFSK
Trigger: TTTGGAAAAGTGGTCAAGGCAACGGCCTTCCATCTG...TCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp CTTCCCAAAAGCTGCCCCCACAAGACTGGAGGAGTGTTGTGCATCTGTGACCACCTCCCTCTGGGTGTGTaGGCACACACCACAAGGCTC +
Preference number: 4 (lower is better)
Translates to: LPKSCPHKTGGVLCICDHLPLGV*AHTTRL
Trigger: GAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAG...GTGGTCACAGATGCACAACACTCCTCCAGTCTTGTGGGGGCAGCTTTTGGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTGCCGGCGGGTCTGGATaGCGGGTGCGGCGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSAGGSG*RVRRSV
Trigger: GACTGAGCGCCGCACCCGCCATCCAGACCCGCCGGC...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp AGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACATCGCCCGTGCGCGCTaGGGCCACGGCTGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: STTDHVLSKSNCSSFSTDIARAR*GHGWRD
Trigger: GTCCCTCCAGCCGTGGCCCCAGCGCGCACGGGCGAT...GTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp CAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCCACGAGGGAGCTGCAGGCTaGAAAGGAGGTGTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: QVSQLTRGGVLFQHLHGHEGAAG*KGGVEE
Trigger: TTCTTCAACACCTCCTTTCCAGCCTGCAGCTCCCTC...GTGGCCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR CCA 90 bp AAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCAAAGCTGCCGTTGGCCTaGACCGAGGTCTCGTTGGGC +
Preference number: 4 (lower is better)
Translates to: KLSLWVCAHTPQGSITHAKLPLA*TEVSLG
Trigger: GCCCAACGAGACCTCGGTCCAGGCCAACGGCAGCTT...TGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp TCTGGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCGCACGAAGCTGCCGTTaGCCTGGACCGAGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: SGTPTAPFLHTVLIRGSGARSCR*PGPRSR
Trigger: ACGAGACCTCGGTCCAGGCCAACGGCAGCTTCGTGC...GCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATGCACCGCCAGCTGCATaGTGCGGTTCTCCGAGATGG +
Preference number: 4 (lower is better)
Translates to: NSPSGCVRTHHKALLHTHAPPAA*CGSPRW
Trigger: CCATCTCGGAGAACCGCACCATGCAGCTGGCGGTGC...ATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp CTGCTGGTCGGTGGCCACCACCATGTAGTGAAGTTCGGCACACTTGGGCCGCCGATGCCACTGAATGCCTaGCAGTTTTCCACACAGACT +
Preference number: 4 (lower is better)
Translates to: LLVGGHHHVVKFGTLGPPMPLNA*QFSTQT
Trigger: AGTCTGTGTGGAAAACTGCCAGGCATTCAGTGGCAT...CGGCGGCCCAAGTGTGCCGAACTTCACTACATGGTGGTGGCCACCGACCAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCGCCGCCGCAGGGCCTTaGTGTCATTCACAAACAGGA +
Preference number: 4 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTAAAGP*CHSQTG
Trigger: TCCTGTTTGTGAATGACACCAAGGCCCTGCGGCGGC...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GAACGAGCTTCATCTCGGCCAGATACTGCATCCCCTGTGAGATCTGCCAGGCAATGCCTAGAGGTCTGCTaGTCGGTGGCCACCACCATG +
Preference number: 4 (lower is better)
Translates to: ERASSRPDTASPVRSARQCLEVC*SVATTM
Trigger: CATGGTGGTGGCCACCGACCAGCAGACCTCTAGGCA...TTGCCTGGCAGATCTCACAGGGGATGCAGTATCTGGCCGAGATGAAGCTCGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GGGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGAGGGAATTCCCACTTTaGATCCTCCAGGATCTTGAA +
Preference number: 4 (lower is better)
Translates to: GPASSCNLATPDGGHVAGREFPL*ILQDLE
Trigger: TTCAAGATCCTGGAGGATCCAAAGTGGGAATTCCCT...CCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCGGGAGTCAGATGGAGTaGACGCCGCAAGGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTGSQME*TPQGPS
Trigger: ACTTGGACCTTGCGGCGTCCACTCCATCTGACTCCC...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp CTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCCACGTGAGGATGATGTaGTGGGCCCGGGGGACAAAT +
Preference number: 4 (lower is better)
Translates to: LSLWVCAHTPQGSITHASHVRMM*WARGTN
Trigger: ATTTGTCCCCCGGGCCCACCACATCATCCTCACGTG...GGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GGCTGGAAAGGAGGTGTTGAAGAAGGAGAAGTATACGCGGGCACAGCCTGGCCAGAGAAGTCAGGTCTGTaGGGGCATCGGCCACATTGC +
Preference number: 4 (lower is better)
Translates to: GWKGGVEEGEVYAGTAWPEKSGL*GHRPHC
Trigger: GCAATGTGGCCGATGCCCCCACAGACCTGACTTCTC...TGGCCAGGCTGTGCCCGCGTATACTTCTCCTTCTTCAACACCTCCTTTCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638465.1
3UTR CAA 72 bp AGGAGCGGGCCATCCTGGCTGCAGGCCCCATACAATTaGATGACATGTGGGTGGTTGACCTGCTTCAGGACG +
Preference number: 4 (lower is better)
Translates to: RSGPSWLQAPYN*MTCGWLTCFRT
Trigger: CGTCCTGAAGCAGGTCAACCACCCACATGTCATCAAATTGTATGGGGCCTGCAGCCAGGATGGCCCGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp CAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGATGGGCCCTGGAAGTCTaGGTCATTGACCAGCACCGC +
Preference number: 4 (lower is better)
Translates to: QPPFFILFSSGVVAAQYRWALEV*VIDQHR
Trigger: GCGGTGCTGGTCAATGACTCAGACTTCCAGGGCCCA...TCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp GGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTGCAGCACCGACACGTTaGAGTGGAGCAAGAGGACGC +
Preference number: 4 (lower is better)
Translates to: GLQQPPFFILFSSGVVAAAAPTR*SGARGR
Trigger: GCGTCCTCTTGCTCCACTTCAACGTGTCGGTGCTGC...AGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp GGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACAAACCTGTTGCAGTGTCCTCGGCTGAGGTaGCCACCCCTAGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GQLFRPGVLTLLRTNLLQCPRLR*PPLACC
Trigger: GCAGCACGCTAGGGGTGGTCACCTCAGCCGAGGACA...CTGCAACAGGTTTGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp GGTGGCAGGTGGGATTCACAGCAGCAAAGCCTCTGCTGTCAGCAATTCTGGGACGAAGGTCATCTCAGCTaGGGAGATGGGTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: GGRWDSQQQSLCCQQFWDEGHLS*GDGWLV
Trigger: CACAAGCCACCCATCTCCTCAGCTGAGATGACCTTC...GTCCCAGAATTGCTGACAGCAGAGGCTTTGCTGCTGTGAATCCCACCTGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp ATGCAGAAGGCAGACAGCAGCACCGAGACGATGAAGGAGAAGAGGACAGCGGCTGAAGGTCATCTCAGCTaGGGAGATGGGTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: MQKADSSTETMKEKRTAAEGHLS*GDGWLV
Trigger: CACAAGCCACCCATCTCCTCAGCTGAGATGACCTTC...AGCCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCTGCTGTCTGCCTTCTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCGATCTGCCAGGCAAATaGGATGAGGTCGCCCATGGT +
Preference number: 4 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTDLPGK*DEVAHG
Trigger: ACCATGGGCGACCTCATCTCATTTGCCTGGCAGATC...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp AGAGTTTTTCCAAGAACCAAGTTCTTCCGAGGGAATTCCCACTTTGGATCCTCCGGTCTGGATGGCGGGTaGGGCGCTCAGTCTGGCCGC +
Preference number: 4 (lower is better)
Translates to: RVFPRTKFFRGNSHFGSSGLDGG*GAQSGR
Trigger: GCGGCCAGACTGAGCGCCGCACCCGCCATCCAGACC...GGAGGATCCAAAGTGGGAATTCCCTCGGAAGAACTTGGTTCTTGGAAAAACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp CGGCCTTTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCATCCAGTTGTTCTCATaGAGCCGTGTGCGGTACGTG +
Preference number: 4 (lower is better)
Translates to: RPFVRLLLPALQHQAVHLIQLFS*SRVRYV
Trigger: CACGTACCGCACACGGCTGCATGAGAACAACTGGAT...GAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR GCA 90 bp CTTCCCAAAAGCTGCCCCCACAAGACTGGAGGAGTGTTGTGCATCTGTGACCACGTCGGTTCTCCCGAATaGGGAAGGAGGGCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: LPKSCPHKTGGVLCICDHVGSPE*GRRALS
Trigger: AGACAAGGCCCTCCTTCCGCATTCGGGAGAACCGAC...GTGGTCACAGATGCACAACACTCCTCCAGTCTTGTGGGGGCAGCTTTTGGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp CTAGAACAGTACCTGGCCCCTGGCAGGCATGCAAGAGGTACTTCTGGAATATTGGGAACTGGTGGAAGGTaGCTGGGGGTCGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LEQYLAPGRHARGTSGILGTGGR*LGVGSP
Trigger: GGGAGAACCGACCCCCAGGCACCTTCCACCAGTTCC...CAATATTCCAGAAGTACCTCTTGCATGCCTGCCAGGGGCCAGGTACTGTTCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR GCA 90 bp GCCCTCTTCCCTGATACCACCATCCACATAGTAAAGATGGCATGGAATCTCTCCTCGTACTTCTCCCGCTaGTCGCGGTCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: ALFPDTTIHIVKMAWNLSSYFSR*SRSRAQ
Trigger: CTGGGCCCTGGACCGCGAGCAGCGGGAGAAGTACGA...GGAGAGATTCCATGCCATCTTTACTATGTGGATGGTGGTATCAGGGAAGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp AGCATTTTTCAAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATCGGCTGCGATCACCGTaGGGCACAGCTCGTCGCACA +
Preference number: 4 (lower is better)
Translates to: SIFQTLPLGVCAHTTRLYRLRSP*GTARRT
Trigger: TGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCG...ATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTTGAAAAATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp CTCCACGATGAGGAGGAGCGGGCCATCCTGGCTGCAGGCCCCATACAATTTGATTCCTGCTTCCAGCATTaGAGCATCAGGCGGTACATC +
Preference number: 4 (lower is better)
Translates to: LHDEEERAILAAGPIQFDSCFQH*SIRRYI
Trigger: GATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGA...ATCAAATTGTATGGGGCCTGCAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp TTGATGTCTTGGGTCTCCACAACATCGCAGTGGCCGTCGGGGCAGGTCTTGGTGCTTTTGTCCGGCTCCTaGTTCCAGCATTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: LMSWVSTTSQWPSGQVLVLLSGS*FQHCSI
Trigger: GATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAG...CACCAAGACCTGCCCCGACGGCCACTGCGATGTTGTGGAGACCCAAGACATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp ACAGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGGGACGCGACGGACACTaGGGGCGCGACGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: TAPQTMFFQKATAPALALGRDGH*GRDARS
Trigger: GGAACGTGCGTCGCGCCCCCAGTGTCCGTCGCGTCC...CAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GCCCTCTTCCCTGATACCACCATCCACATAGTAAAGATGGCATGGAATCTCTCCGCGTCCCGCAGGGCATaGACGTACAGCAAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: ALFPDTTIHIVKMAWNLSASRRA*TYSKGV
Trigger: CACGCCCTTGCTGTACGTCCATGCCCTGCGGGACGC...GGAGAGATTCCATGCCATCTTTACTATGTGGATGGTGGTATCAGGGAAGAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AGCATTTTTCAAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATAGCAGGCGGAACTGGTaGAAGGTGCCTGGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: SIFQTLPLGVCAHTTRLYSRRNW*KVPGGR
Trigger: CCGACCCCCAGGCACCTTCCACCAGTTCCGCCTGCT...ATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTTGAAAAATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GCAAATGAGATGAGGTCGCCCATGGTGAGGGCCCGCTCATCCGGGTGGTCCAGGGAATGCAGCTTGTACTaGACGTTGATGCCACTGAAT +
Preference number: 4 (lower is better)
Translates to: ANEMRSPMVRARSSGWSRECSLY*TLMPLN
Trigger: ATTCAGTGGCATCAACGTCCAGTACAAGCTGCATTC...CCTGGACCACCCGGATGAGCGGGCCCTCACCATGGGCGACCTCATCTCATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGACAAATGTTGATGTCTTaGGTCTCCACAACATCGCAG +
Preference number: 4 (lower is better)
Translates to: GQPAPATSLPLMEDMWLGQMLMS*VSTTSQ
Trigger: CTGCGATGTTGTGGAGACCCAAGACATCAACATTTG...TCCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GAGAAGAGGACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGACAAATGTTGATGTCTTaGGTCTCCACAACATCGCAG +
Preference number: 4 (lower is better)
Translates to: EKRTAAAITVRHSSSHSGQMLMS*VSTTSQ
Trigger: CTGCGATGTTGTGGAGACCCAAGACATCAACATTTG...TCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp TCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCCCCTGAGAGTTCCTCGCACAGTGGATCCTaGATGTCTTCGGGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: SHPRSALFNLFLVSPESSSHSGS*MSSGSQ
Trigger: CTGCGAGCCCGAAGACATCCAGGATCCACTGTGCGA...GGAACTCTCAGGGGAGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp CACCTGGGAACTGAACACGGCTCGGCCAATGTGACGTTCACAAAGAAAGGGCCGGCTCTGCCTTTCAGATaGAAGGCCGTTGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: HLGTEHGSANVTFTKKGPALPFR*KAVALT
Trigger: GGTCAAGGCAACGGCCTTCCATCTGAAAGGCAGAGC...CGGCCCTTTCTTTGTGAACGTCACATTGGCCGAGCCGTGTTCAGTTCCCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp CTGCTGGTCGGTGGCCACCACCATGTAGTGAAGTTCGGCACACTTGGGCCGCCGCAATTTGATGACATGTaGGTGGTTGACCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LLVGGHHHVVKFGTLGPPQFDDM*VVDLLQ
Trigger: CTGAAGCAGGTCAACCACCCACATGTCATCAAATTG...CGGCGGCCCAAGTGTGCCGAACTTCACTACATGGTGGTGGCCACCGACCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp TCCCCATCACTGGGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACACTCGCTGCAGTTGTCTaGCCTCTCCATCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SPSLGQLFRPGVLTLLRTLAAVV*PLHPVA
Trigger: GGCCACCGGATGGAGAGGCCAGACAACTGCAGCGAG...TGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACCCAGTGATGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp CCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCGACACAGACCAACACTaGGTGCTGCTGGGCACTGAA +
Preference number: 4 (lower is better)
Translates to: PSGCVRTHHKALLHTHPSDTDQH*VLLGTE
Trigger: TTCAGTGCCCAGCAGCACCCAGTGTTGGTCTGTGTC...GCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
3UTR CAA 72 bp AAACACCGGCCTTTTGTCCGGCTCCTGCTTCCAGCATaGCAGCATCAGGCGGTACATCTCCTCGCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: KHRPFVRLLLPA*QHQAVHLLAAV
Trigger: AACTGCAGCGAGGAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAGGCCGGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
3UTR CAA 72 bp TCCAGGTCTTTGCTGATGTCCGCAAACACCGGCCTTTaGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: SRSLLMSANTGL*SGSCFQHCSIR
Trigger: CCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAGGCCGGTGTTTGCGGACATCAGCAAAGACCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000615310.4
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp AACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATGCCTGTAGGCCACGCTaGTGTTGGGGCACAAGAACT +
Preference number: 4 (lower is better)
Translates to: NSPSGCVRTHHKALLHTHACRPR*CWGTRT
Trigger: AGTTCTTGTGCCCCAACATCAGCGTGGCCTACAGGC...ATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTTGGGCAGGTGCAGGCTaGCCGGCAGCACCGACACGT +
Preference number: 4 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSWAGAG*PAAPTR
Trigger: ACGTGTCGGTGCTGCCGGTCAGCCTGCACCTGCCCA...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR TCA 90 bp ACAGCAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCCTGAGGGCAAATGTTaGTGTCTTGGGTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: TAGLAAHSGRRSLSASSRPEGKC*CLGSPQ
Trigger: TTGTGGAGACCCAAGACATCAACATTTGCCCTCAGG...CCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp TTGATGTCTTGGGTCTCCACAACATCGCAGTGGCCGTCGGGGCAGGTCTTGGTGCCTGAGGGCAAATGTTaGTGTCTTGGGTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: LMSWVSTTSQWPSGQVLVPEGKC*CLGSPQ
Trigger: TTGTGGAGACCCAAGACATCAACATTTGCCCTCAGG...CACCAAGACCTGCCCCGACGGCCACTGCGATGTTGTGGAGACCCAAGACATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp GTGACGTTCACAAAGAAAGGGCCGGTAGACTTTCCATTCTCAGCATGTTTCTTCCGGAAGAGGAGTAGCTaGCCGGGAAGGCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: VTFTKKGPVDFPFSACFFRKRSS*PGRPGR
Trigger: CCGCCCAGGCCTTCCCGGTCAGCTACTCCTCTTCCG...GAAGAAACATGCTGAGAATGGAAAGTCTACCGGCCCTTTCTTTGTGAACGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp TCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCCCCTGAGAGTTCCGATCCTCCAGGATCTTaGAGGCATCCACGGAGACCT +
Preference number: 4 (lower is better)
Translates to: SHPRSALFNLFLVSPESSDPPGS*RHPRRP
Trigger: AGGTCTCCGTGGATGCCTTCAAGATCCTGGAGGATC...GGAACTCTCAGGGGAGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp CTTGGGTCTCCACAACATCGCAGTGGCCGTCGGGGCAGGTCTTGGTGCTGGGAGAAAGTAGAAGTACTATaGCTTGATTCCCACCCCAGA +
Preference number: 4 (lower is better)
Translates to: LGSPQHRSGRRGRSWCWEKVEVL*LDSHPR
Trigger: TCTGGGGTGGGAATCAAGTCATAGTACTTCTACTTT...CTCCCAGCACCAAGACCTGCCCCGACGGCCACTGCGATGTTGTGGAGACCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR TCA 90 bp CTATTACACACGCATCCAAGCCTTGGCCTCACAAAATGCCACAATTTTGCTGTTGCCCTGGAGGGGCATTaGCACTACCCCCAGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LLHTHPSLGLTKCHNFAVALEGH*HYPQAP
Trigger: GGGGGCCTGGGGGTAGTGTCAATGCCCCTCCAGGGC...AACAGCAAAATTGTGGCATTTTGTGAGGCCAAGGCTTGGATGCGTGTGTAATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCGGCACTCAGCGCTGCTaGGCGCCCTGCTTCGGTCGC +
Preference number: 4 (lower is better)
Translates to: VLARTIFTVHCKTTAPQTGTQRC*APCFGR
Trigger: GCGACCGAAGCAGGGCGCGCAGCAGCGCTGAGTGCC...GGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR GCA 90 bp CTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCATCCAGTTGTTCTCATaGAGCCGTGTGCGGTACGTG +
Preference number: 4 (lower is better)
Translates to: LSLWVCAHTPQGSITHASIQLFS*SRVRYV
Trigger: CACGTACCGCACACGGCTGCATGAGAACAACTGGAT...GGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp TTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGAACACGTGAGGATGTCCCCCAACAATGCTaGCCCGGAGGCAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: FILFSSGVVAAQYRTREDVPQQC*PGGSPE
Trigger: CTCAGGACTGCCTCCGGGGCAGCATTGTTGGGGGAC...ATCCTCACGTGTTCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp TTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGAACACGTGAGGATGAAGAGGACAGCGGCTaGGATCACCGTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: FILFSSGVVAAQYRTREDEEDSG*DHRAAQ
Trigger: CTGTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTC...ATCCTCACGTGTTCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp CTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACCGGCCTTGAAGAGGACAGCGGCTaGGATCACCGTGCGGCACAG +
Preference number: 4 (lower is better)
Translates to: LLTIIFSRSLLMSANTGLEEDSG*DHRAAQ
Trigger: CTGTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTC...AAGGCCGGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp TGTGGGTGGTTGACCTGCTTCAGGACGTTGAACTCTGACAGCAGGTCTCGCAGCTGTGGTAGCAGTGGATaGAGAAGGCAGACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CGWLTCFRTLNSDSRSRSCGSSG*RRQTAA
Trigger: TGCTGCTGTCTGCCTTCTGCATCCACTGCTACCACA...GCTGCGAGACCTGCTGTCAGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp AATCCGACCCTGGCTCCTCTTCACGTAGGAATCCTCTTCATAAACATCTCGGGAAGCTGGAGTTGCGGCTaGCTCCACTGCCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: NPTLAPLHVGILFINISGSWSCG*LHCPGS
Trigger: GCTACCTGGGCAGTGGAGGCAGCCGCAACTCCAGCT...TCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGCCAGGGTCGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp CTTCTCCTCCTCAGGGAAGCAGTTGCAGGTGCCATAGCCAGCTTTAATCCCCCGATCTCGGCCAGATACTaGATCCCCTGTGAGATCTGC +
Preference number: 4 (lower is better)
Translates to: LLLLREAVAGAIASFNPPISARY*IPCEIC
Trigger: GCAGATCTCACAGGGGATGCAGTATCTGGCCGAGAT...CGGGGGATTAAAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGGAGGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp AAGTACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGGTGGCTGCTCGCCAGTaGCGGGTGGCCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: KYYDLIPTPEAPYSTCSWVAARQ*RVASER
Trigger: CCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCAC...CCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp CCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGAACACGTCTTGGCTGTGGGGTGTaGTGCAGGCTGGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: PFFILFSSGVVAAQYRTRLGCGV*CRLVAG
Trigger: ACCTGCCACCAGCCTGCAGCACACCCCACAGCCAAG...ACGTGTTCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTTACGCGGGCACAGCCTaGCCACTGGCACTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSYAGTA*PLALAL
Trigger: GAGGGCGAGTGCCAGTGGCCAGGCTGTGCCCGCGTA...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCGAGGGAGCTGCAGGCTaGAAAGGAGGTGTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTEGAAG*KGGVEE
Trigger: TTCTTCAACACCTCCTTTCCAGCCTGCAGCTCCCTC...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp TGTAATCAGAGGTGTAGCAGTCCTTGGTCATTGTCATTGCTACTTCTAACACAGCGCCCGCGGGGAAGGTaGGCGCCGAGTCGTCCTCGT +
Preference number: 4 (lower is better)
Translates to: CNQRCSSPWSLSLLLLTQRPRGR*APSRPR
Trigger: ACGAGGACGACTCGGCGCCCACCTTCCCCGCGGGCG...CTGTGTTAGAAGTAGCAATGACAATGACCAAGGACTGCTACACCTCTGATTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCACCCGGAAGGTCTGCTaGGCCCAGGTGTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: VLARTIFTVHCKTTAPQTTRKVC*AQVSPG
Trigger: CCCCGGGGACACCTGGGCCCAGCAGACCTTCCGGGT...GGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CCA 90 bp TCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCCTTGCCGCCGCAGGGCCTTaGTGTCATTCACAAACAGGA +
Preference number: 4 (lower is better)
Translates to: SGCVRTHHKALLHTHPSLAAAGP*CHSQTG
Trigger: TCCTGTTTGTGAATGACACCAAGGCCCTGCGGCGGC...AAGGCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AGCACCGAGACGATGAAGGAGAAGAGGACAGCGGCTGCGATCACCGTGCGGCACCAAATGTTGATGTCTTaGGTCTCCACAACATCGCAG +
Preference number: 4 (lower is better)
Translates to: STETMKEKRTAAAITVRHQMLMS*VSTTSQ
Trigger: CTGCGATGTTGTGGAGACCCAAGACATCAACATTTG...GTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCCTGACCGGGAAGGCCTaGGCGGGCCTCCGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: VLARTIFTVHCKTTAPQTLTGKA*AGLRKV
Trigger: GACCTTCCGGAGGCCCGCCCAGGCCTTCCCGGTCAG...GGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CCA 90 bp AAACATCTCGGGACAAGCCGAAATCCGAAATCTTCATCTTCCGCCCCTCAGCTAAGACCTGGTTCTCCATaGAGTCCAGCGAGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: KHLGTSRNPKSSSSAPQLRPGSP*SPARAG
Trigger: GCCGGCCCTCGCTGGACTCCATGGAGAACCAGGTCT...TAGCTGAGGGGCGGAAGATGAAGATTTCGGATTTCGGCTTGTCCCGAGATGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp AACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATGCATCCACGGAGACCTaGTTCTCCATGGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: NSPSGCVRTHHKALLHTHASTET*FSMESS
Trigger: GCTGGACTCCATGGAGAACCAGGTCTCCGTGGATGC...ATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GTCTCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACGCCCGCTCATCCGGGTaGTCCAGGGAGCTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: VSPLNHHLLQVFADVRKHARSSG*SRELEL
Trigger: CAACTCCAGCTCCCTGGACCACCCGGATGAGCGGGC...GTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp ACAGCAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGTGCCATCCATTTAACTaGAATCCGACCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: TAGLAAHSGRRSLSASSRCHPFN*NPTLAP
Trigger: AGGAGCCAGGGTCGGATTCCAGTTAAATGGATGGCA...CCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCTCGCCAGTGCCGGGTaGCCTCTGAGAGGCACCTGC +
Preference number: 4 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSLASAG*PLRGTC
Trigger: GCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAG...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp CTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCATCAGCTCTCGTGAGTaGTACAGGACTCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LSLWVCAHTPQGSITHASISSRE*YRTLSR
Trigger: CCTGGAGAGAGTCCTGTACCACTCACGAGAGCTGAT...GGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
3UTR CAA 72 bp TTGATGACATGTGGGTGGTTGACCTGCTTCAGGACGTaGAACTCTGACAGCAGGTCTCGCAGCTCACTCGGG +
Preference number: 4 (lower is better)
Translates to: LMTCGWLTCFRT*NSDSRSRSSLG
Trigger: CCCGAGTGAGCTGCGAGACCTGCTGTCAGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACATGTCATCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp CTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACCGGCCTTCGCGGTTGCGGACACTaGGCTTCTCCCAGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: LLTIIFSRSLLMSANTGLRGCGH*ASPRSY
Trigger: ATAGCTCCTGGGAGAAGCTCAGTGTCCGCAACCGCG...AAGGCCGGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR TCA 90 bp CTAGAACAGTACCTGGCCCCTGGCAGGCATGCAAGAGGTACTTCTGGAATATTGGCCTGTAGGCCACGCTaGTGTTGGGGCACAAGAACT +
Preference number: 4 (lower is better)
Translates to: LEQYLAPGRHARGTSGILACRPR*CWGTRT
Trigger: AGTTCTTGTGCCCCAACATCAGCGTGGCCTACAGGC...CAATATTCCAGAAGTACCTCTTGCATGCCTGCCAGGGGCCAGGTACTGTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR TCA 90 bp ACAGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGTGTCCTCGGCTGAGGTaGCCACCCCTAGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TAPQTMFFQKATAPALALCPRLR*PPLACC
Trigger: GCAGCACGCTAGGGGTGGTCACCTCAGCCGAGGACA...CAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp AAGTACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTGTCCTCGGCTGAGGTaGCCACCCCTAGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KYYDLIPTPEAPYSTCSWCPRLR*PPLACC
Trigger: GCAGCACGCTAGGGGTGGTCACCTCAGCCGAGGACA...CCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCCAGCCGTCTCTTGCTaGCTGCACAGGACAGGGGGC +
Preference number: 4 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSPAVSC*LHRTGG
Trigger: GCCCCCTGTCCTGTGCAGTCAGCAAGAGACGGCTGG...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp GGTGGCAGGTGGGATTCACAGCAGCAAAGCCTCTGCTGTCAGCAATTCTGGGACCCTGAGGGCAAATGTTaGTGTCTTGGGTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: GGRWDSQQQSLCCQQFWDPEGKC*CLGSPQ
Trigger: TTGTGGAGACCCAAGACATCAACATTTGCCCTCAGG...GTCCCAGAATTGCTGACAGCAGAGGCTTTGCTGCTGTGAATCCCACCTGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp TCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACCGGGCTGCCAAGTCCCGATaGACGAGCTTCATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SPLNHHLLQVFADVRKHRAAKSR*TSFISA
Trigger: GGCCGAGATGAAGCTCGTTCATCGGGACTTGGCAGC...CCGGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp CTTCTCCTCCTCAGGGAAGCAGTTGCAGGTGCCATAGCCAGCTTTAATCCCCCGAGAAGTACTATGACTTaGTTCCCACCCCAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: LLLLREAVAGAIASFNPPRSTMT*FPPQKR
Trigger: GCGCTTCTGGGGTGGGAATCAAGTCATAGTACTTCT...CGGGGGATTAAAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGGAGGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR TCA 90 bp GCCCTCTTCCCTGATACCACCATCCACATAGTAAAGATGGCATGGAATCTCTCCCAAGATCTCGAATGCTaGGCCCAGGCCCATCCTCGG +
Preference number: 4 (lower is better)
Translates to: ALFPDTTIHIVKMAWNLSQDLEC*AQAHPR
Trigger: CCGAGGATGGGCCTGGGCTCAGCATTCGAGATCTTG...GGAGAGATTCCATGCCATCTTTACTATGTGGATGGTGGTATCAGGGAAGAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp AAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCAAGCCAGAAGAGCTGCTaGGACTTCCCAAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KLSLWVCAHTPQGSITHASQKSC*DFPKAA
Trigger: GGCAGCTTTTGGGAAGTCTCAGCAGCTCTTCTGGCT...TGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp TGCTGTCAGCAATTCTGGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATGCCGTGTGCGGTACGTaGCGTAGAGATGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: CCQQFWDSNSPLSSYCSHAVCGT*RRDAGP
Trigger: TGGGCCAGCATCTCTACGGCACGTACCGCACACGGC...ATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGAATTGCTGACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GAGCTGCAGGCTGGAAAGGAGGTGTTGAAGAAGGAGAAGTATACGCGGGCACAGATCCAGTTGTTCTCATaGAGCCGTGTGCGGTACGTG +
Preference number: 4 (lower is better)
Translates to: ELQAGKEVLKKEKYTRAQIQLFS*SRVRYV
Trigger: CACGTACCGCACACGGCTGCATGAGAACAACTGGAT...CTGTGCCCGCGTATACTTCTCCTTCTTCAACACCTCCTTTCCAGCCTGCAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR GCA 90 bp ACAGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGTCGTACTTCTCCCGCTaGTCGCGGTCCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TAPQTMFFQKATAPALALSYFSR*SRSRAQ
Trigger: CTGGGCCCTGGACCGCGAGCAGCGGGAGAAGTACGA...CAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR GCA 90 bp GAGTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACGCCGGCGTGCACGGTaGACACGGCCACCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: EFWQEPYLLSIVRPQHHRRRRAR*TRPPAR
Trigger: ACGAGCTGGTGGCCGTGTGCACCGTGCACGCCGGCG...TCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR GCA 90 bp GCTCCTCTTCACGTAGGAATCCTCTTCATAAACATCTCGGGACAAGCCGAAATCCGGGGCAGGTCTTGGTaGTGGGAGAGCAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: APLHVGILFINISGQAEIRGRSW*WESRWR
Trigger: TCTCCACCTGCTCTCCCAGCACCAAGACCTGCCCCG...GATTTCGGCTTGTCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp AAGGGATTCAATTGCCATCCATTTAACTGGAATCCGACCCTGGCTCCTCTTCACCGTGTCCCCCAACAATaGTGCCCCGGAGGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: KGFNCHPFNWNPTLAPLHRVPQQ*CPGGSP
Trigger: AGGACTGCCTCCGGGGCAGCATTGTTGGGGGACACG...GTGAAGAGGAGCCAGGGTCGGATTCCAGTTAAATGGATGGCAATTGAATCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp TCTGGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCCCTCAGGGAAGCAGTTaGAGGTGCCATAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SGTPTAPFLHTVLIRGSGPQGSS*RCHSQL
Trigger: AAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGG...GCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GGGAATTCCCACTTTGGATCCTCCAGGATCTTGAAGGCATCCACGGAGACCTGGCTTTTGTCCGGCTCCTaGTTCCAGCATTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: GNSHFGSSRILKASTETWLLSGS*FQHCSI
Trigger: GATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAG...CCAGGTCTCCGTGGATGCCTTCAAGATCCTGGAGGATCCAAAGTGGGAATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp AGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACGCGTCCCGCAGGGCATaGACGTACAGCAAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: STTDHVLSKSNCSSFSTDASRRA*TYSKGV
Trigger: CACGCCCTTGCTGTACGTCCATGCCCTGCGGGACGC...GTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp AGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACGCACAGCCTGGCCACTaGCACTCGCCCTCACGAAGG +
Preference number: 4 (lower is better)
Translates to: STTDHVLSKSNCSSFSTDAQPGH*HSPSRR
Trigger: CCTTCGTGAGGGCGAGTGCCAGTGGCCAGGCTGTGC...GTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTGGAGGGCCTTGTCTCTaGGAAGCAGAGCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSGGPCL*EAELPG
Trigger: CCCCGGGAGCTCTGCTTCCCAGAGACAAGGCCCTCC...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp AGCATTTTTCAAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATCTGGTGGAAGGTGCCTaGGGGTCGGTTCTCCCGAAT +
Preference number: 4 (lower is better)
Translates to: SIFQTLPLGVCAHTTRLYLVEGA*GSVLPN
Trigger: ATTCGGGAGAACCGACCCCCAGGCACCTTCCACCAG...ATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTTGAAAAATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTAGCAGGCGGAACTGGTaGAAGGTGCCTGGGGGTCGG +
Preference number: 4 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSSRRNW*KVPGGR
Trigger: CCGACCCCCAGGCACCTTCCACCAGTTCCGCCTGCT...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp AAGTACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGGGCAGCAGGCGGAACTaGTGGAAGGTGCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: KYYDLIPTPEAPYSTCSWGSRRN*WKVPGG
Trigger: ACCCCCAGGCACCTTCCACCAGTTCCGCCTGCTGCC...CCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GTGACGTTCACAAAGAAAGGGCCGGTAGACTTTCCATTCTCAGCATGTTTCTTCCGTCGGGGCAGGTCTTaGTGCTGGGAGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: VTFTKKGPVDFPFSACFFRRGRS*CWESRW
Trigger: CCACCTGCTCTCCCAGCACCAAGACCTGCCCCGACG...GAAGAAACATGCTGAGAATGGAAAGTCTACCGGCCCTTTCTTTGTGAACGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp TGCTGTCAGCAATTCTGGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATAGACCTGGTTCTCCATaGAGTCCAGCGAGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: CCQQFWDSNSPLSSYCSHRPGSP*SPARAG
Trigger: GCCGGCCCTCGCTGGACTCCATGGAGAACCAGGTCT...ATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGAATTGCTGACAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp TTTGTCCGGCTCCTGCTTCCAGCATTGCAGCATCAGGCGGTACATCTCCTCGCTTTGATGACATGTGGGTaGTTGACCTGCTTCAGGACG +
Preference number: 4 (lower is better)
Translates to: FVRLLLPALQHQAVHLLALMTCG*LTCFRT
Trigger: CGTCCTGAAGCAGGTCAACCACCCACATGTCATCAA...AGCGAGGAGATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAGCCGGACAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp ACAGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGGGTGGTCCAGGGAGCTaGAGTTGCGGCTGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: TAPQTMFFQKATAPALALGGPGS*SCGCLH
Trigger: GTGGAGGCAGCCGCAACTCCAGCTCCCTGGACCACC...CAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GCCCTCTTCCCTGATACCACCATCCACATAGTAAAGATGGCATGGAATCTCTCCCTTCCCCTCCAGCCCTaGAGGGGCATTGACACTACC +
Preference number: 4 (lower is better)
Translates to: ALFPDTTIHIVKMAWNLSLPLQP*RGIDTT
Trigger: GGTAGTGTCAATGCCCCTCCAGGGCTGGAGGGGAAG...GGAGAGATTCCATGCCATCTTTACTATGTGGATGGTGGTATCAGGGAAGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp CCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGAACACGTGGGTGTGCTGCAGGCTaGTGGCAGGTGGGATTCACA +
Preference number: 4 (lower is better)
Translates to: PFFILFSSGVVAAQYRTRGCAAG*WQVGFT
Trigger: TGTGAATCCCACCTGCCACCAGCCTGCAGCACACCC...ACGTGTTCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp GTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCAGAGCTCCCGGGGCTTaGGGGAGCTGCAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: VLARTIFTVHCKTTAPQTRAPGA*GSCRLE
Trigger: TTCCAGCCTGCAGCTCCCTCAAGCCCCGGGAGCTCT...GGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR TCA 90 bp CTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACCGGCCTTCCCCGGAGGCAGTCCTaGGGGCAAATGTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: LLTIIFSRSLLMSANTGLPRRQS*GQMLMS
Trigger: AGACATCAACATTTGCCCTCAGGACTGCCTCCGGGG...AAGGCCGGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp AAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCAGGAAGGCCGTTGCCTTaGCCACTTTTCCAAATTCGC +
Preference number: 4 (lower is better)
Translates to: KLSLWVCAHTPQGSITHAGRPLP*PLFQIR
Trigger: GCGAATTTGGAAAAGTGGTCAAGGCAACGGCCTTCC...TGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp AGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACTGGCGTACTCCACGATaGGGAGGAGCGGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: STTDHVLSKSNCSSFSTDWRTPR*GGAGHP
Trigger: AGGATGGCCCGCTCCTCCTCATCGTGGAGTACGCCA...GTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp GGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACAAACCTGTTGCAGTCTCCAGGTCTTTGCTaGTGTCCGCAAACACCGGCC +
Preference number: 4 (lower is better)
Translates to: GQLFRPGVLTLLRTNLLQSPGLC*CPQTPA
Trigger: GGCCGGTGTTTGCGGACATCAGCAAAGACCTGGAGA...CTGCAACAGGTTTGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp CCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACGGTGTCTCCTCCTCTaGGAGGCCGTCGTCATAAAT +
Preference number: 4 (lower is better)
Translates to: PTAPFLHTVLIRGSGCSVRCLLL*EAVVIN
Trigger: ATTTATGACGACGGCCTCTCAGAGGAGGAGACACCG...TACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp TCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCCCCTGAGAGTTCCAGAAGTACTATGACTTaGTTCCCACCCCAGAAGCGC +
Preference number: 4 (lower is better)
Translates to: SHPRSALFNLFLVSPESSRSTMT*FPPQKR
Trigger: GCGCTTCTGGGGTGGGAATCAAGTCATAGTACTTCT...GGAACTCTCAGGGGAGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp AATTCTGGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTCTGCCACCTGGGAACTaGACACGGCTCGGCCAATGT +
Preference number: 4 (lower is better)
Translates to: NSGTPTAPFLHTVLIRGSLPPGN*TRLGQC
Trigger: ACATTGGCCGAGCCGTGTTCAGTTCCCAGGTGGCAG...ACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp CAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGAGTGAGCCCTCTTCCCTaGTACCACCATCCACATAGT +
Preference number: 4 (lower is better)
Translates to: QPPFFILFSSGVVAAQYRVSPLP*YHHPHS
Trigger: ACTATGTGGATGGTGGTATCAGGGAAGAGGGCTCAC...TCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp GGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTGCGAAGTTACAGTGCTaGCAACACAGCCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GLQQPPFFILFSSGVVAAAKLQC*QHSQKS
Trigger: GCTCTTCTGGCTGTGTTGTCAGCACTGTAACTTCGC...AGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp AATTCTGGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCCCAATGCCACTTTaGCTAGCAGCGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: NSGTPTAPFLHTVLIRGSGPMPL*LAAAAA
Trigger: TGCTGCTGCCGCTGCTAGGCAAAGTGGCATTGGGCC...ACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTGGAACTGGTGGAAGGTaGCTGGGGGTCGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSGTGGR*LGVGSP
Trigger: GGGAGAACCGACCCCCAGGCACCTTCCACCAGTTCC...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp CTATTACACACGCATCCAAGCCTTGGCCTCACAAAATGCCACAATTTTGCTGTTCCCCGGGGAGCAGCGTaGTTGTGTACCGCCTCACCA +
Preference number: 4 (lower is better)
Translates to: LLHTHPSLGLTKCHNFAVPRGAA*LCTASP
Trigger: TGGTGAGGCGGTACACAAGCACGCTGCTCCCCGGGG...AACAGCAAAATTGTGGCATTTTGTGAGGCCAAGGCTTGGATGCGTGTGTAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp AGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACACCAGCACCGCCAGCTaGATGGTGCGGTTCTCCGAG +
Preference number: 4 (lower is better)
Translates to: STTDHVLSKSNCSSFSTDTSTAS*MVRFSE
Trigger: CTCGGAGAACCGCACCATGCAGCTGGCGGTGCTGGT...GTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR GCA 90 bp CTATTACACACGCATCCAAGCCTTGGCCTCACAAAATGCCACAATTTTGCTGTTAGCTGGGCCTGGGCCTaGCTAGAGGTCTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: LLHTHPSLGLTKCHNFAVSWAWA*LEVCWS
Trigger: CGACCAGCAGACCTCTAGGCAGGCCCAGGCCCAGCT...AACAGCAAAATTGTGGCATTTTGTGAGGCCAAGGCTTGGATGCGTGTGTAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp CTATTACACACGCATCCAAGCCTTGGCCTCACAAAATGCCACAATTTTGCTGTTGCCTCCACTCACACCTaGCTGTTGGGGAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLHTHPSLGLTKCHNFAVASTHT*LLGSPG
Trigger: GCCTGGGCTCCCCAACAGGCAGGTGTGAGTGGAGGC...AACAGCAAAATTGTGGCATTTTGTGAGGCCAAGGCTTGGATGCGTGTGTAATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTAGCTGGAGTTGCGGCTaGCTCCACTGCCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSSWSCG*LHCPGS
Trigger: GCTACCTGGGCAGTGGAGGCAGCCGCAACTCCAGCT...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp AACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCTTTTGTCCGGCTCCTaGTTCCAGCATTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: NSPSGCVRTHHKALLHTHLLSGS*FQHCSI
Trigger: GATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAG...ATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp TCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCCTTAGACTTCCCAAAAGCTaGCCCCACAAGACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SGCVRTHHKALLHTHPSLRLPKS*PHKTGG
Trigger: TCCTCCAGTCTTGTGGGGGCAGCTTTTGGGAAGTCT...AAGGCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp CTAGAACAGTACCTGGCCCCTGGCAGGCATGCAAGAGGTACTTCTGGAATATTGGGCCCCTGGCAGGCATaGAAGAGGTACTTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: LEQYLAPGRHARGTSGILGPWQA*KRYFWN
Trigger: ATTCCAGAAGTACCTCTTGCATGCCTGCCAGGGGCC...CAATATTCCAGAAGTACCTCTTGCATGCCTGCCAGGGGCCAGGTACTGTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR CCA 90 bp ACAGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGGGCGTGCCGGCTGCCTaGTCCACATACAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TAPQTMFFQKATAPALALGVPAA*STYSFS
Trigger: GGAGAAGCTGTATGTGGACCAGGCAGCCGGCACGCC...CAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp TCCCCATCACTGGGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACATTCTCCCAGGAGCTATaGTCCAGGCTCCGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: SPSLGQLFRPGVLTLLRTFSQEL*SRLRLR
Trigger: CCTTAACCGGAGCCTGGACCATAGCTCCTGGGAGAA...TGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACCCAGTGATGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACCGAAGACACGCAGCGTaGCCACCACGGTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: STTDHVLSKSNCSSFSTDRRHAA*PPRCPP
Trigger: AGGAGGACACCGTGGTGGCCACGCTGCGTGTCTTCG...GTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CCA 90 bp GAAGTTAAAACAAACTACCAAAAACGAGTCTGCCACCTGGGAACTGAACACGGCCGAAGACACGCAGCGTaGCCACCACGGTGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EVKTNYQKRVCHLGTEHGRRHAA*PPRCPP
Trigger: AGGAGGACACCGTGGTGGCCACGCTGCGTGTCTTCG...GCCGTGTTCAGTTCCCAGGTGGCAGACTCGTTTTTGGTAGTTTGTTTTAACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACAAGCTGCCGTTGGCCTaGACCGAGGTCTCGTTGGGC +
Preference number: 4 (lower is better)
Translates to: STTDHVLSKSNCSSFSTDKLPLA*TEVSLG
Trigger: GCCCAACGAGACCTCGGTCCAGGCCAACGGCAGCTT...GTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CCA 90 bp AAGTACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGGCACCGCCAGCTGCATaGTGCGGTTCTCCGAGATGG +
Preference number: 4 (lower is better)
Translates to: KYYDLIPTPEAPYSTCSWAPPAA*CGSPRW
Trigger: CCATCTCGGAGAACCGCACCATGCAGCTGGCGGTGC...CCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CCA 90 bp TTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGAACACGTGAGGATTCGCACAGTGGATCCTaGATGTCTTCGGGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: FILFSSGVVAAQYRTREDSHSGS*MSSGSQ
Trigger: CTGCGAGCCCGAAGACATCCAGGATCCACTGTGCGA...ATCCTCACGTGTTCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp TCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACCGGTCGCACAGTGGATCCTaGATGTCTTCGGGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: SPLNHHLLQVFADVRKHRSHSGS*MSSGSQ
Trigger: CTGCGAGCCCGAAGACATCCAGGATCCACTGTGCGA...CCGGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GCTCCTCTTCACGTAGGAATCCTCTTCATAAACATCTCGGGACAAGCCGAAATCAGGAGCGGGCCATCCTaGCTGCAGGCCCCATACAAT +
Preference number: 4 (lower is better)
Translates to: APLHVGILFINISGQAEIRSGPS*LQAPYN
Trigger: ATTGTATGGGGCCTGCAGCCAGGATGGCCCGCTCCT...GATTTCGGCTTGTCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp AAGTACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGCTCGCTGCAGTTGTCTaGCCTCTCCATCCGGTGGCC +
Preference number: 4 (lower is better)
Translates to: KYYDLIPTPEAPYSTCSWLAAVV*PLHPVA
Trigger: GGCCACCGGATGGAGAGGCCAGACAACTGCAGCGAG...CCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp TTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGAACACGTGAGGATGGGAGTCAGATGGAGTaGACGCCGCAAGGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: FILFSSGVVAAQYRTREDGSQME*TPQGPS
Trigger: ACTTGGACCTTGCGGCGTCCACTCCATCTGACTCCC...ATCCTCACGTGTTCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACAAACCTGTTGCAGAACGAGTCTGCCACCTaGGAACTGAACACGGCTCGG +
Preference number: 4 (lower is better)
Translates to: GQLFRPGVLTLLRTNLLQNESAT*ELNTAR
Trigger: CCGAGCCGTGTTCAGTTCCCAGGTGGCAGACTCGTT...CTGCAACAGGTTTGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp CCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGAACACGTGTGAGGATGATGTGGTaGGCCCGGGGGACAAATGTG +
Preference number: 4 (lower is better)
Translates to: PFFILFSSGVVAAQYRTRVRMMW*ARGTNV
Trigger: CACATTTGTCCCCCGGGCCCACCACATCATCCTCAC...ACGTGTTCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp TCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCCTTTGGAGAGGTTCCGGTTaGGAACCAGCCTATAGTCAT +
Preference number: 4 (lower is better)
Translates to: SGCVRTHHKALLHTHPSLWRGSG*EPAYSH
Trigger: ATGACTATAGGCTGGTTCTCAACCGGAACCTCTCCA...AAGGCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp GTCTCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACCCCCGGAGGCAGTCCTaGGGGCAAATGTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: VSPLNHHLLQVFADVRKHPRRQS*GQMLMS
Trigger: AGACATCAACATTTGCCCTCAGGACTGCCTCCGGGG...GTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp GGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACAAACCTGTTGCAGGATCTGCCAGGCAAATaGGATGAGGTCGCCCATGGT +
Preference number: 4 (lower is better)
Translates to: GQLFRPGVLTLLRTNLLQDLPGK*DEVAHG
Trigger: ACCATGGGCGACCTCATCTCATTTGCCTGGCAGATC...CTGCAACAGGTTTGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp AAGTACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGGCTGCCAAGTCCCGATaGACGAGCTTCATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: KYYDLIPTPEAPYSTCSWAAKSR*TSFISA
Trigger: GGCCGAGATGAAGCTCGTTCATCGGGACTTGGCAGC...CCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp TCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACCGGCGGTGTCTCCTCCTCTaGGAGGCCGTCGTCATAAAT +
Preference number: 4 (lower is better)
Translates to: SPLNHHLLQVFADVRKHRRCLLL*EAVVIN
Trigger: ATTTATGACGACGGCCTCTCAGAGGAGGAGACACCG...CCGGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp AGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACCAACCTCGCTACCCCTaGTGGAGGACATGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: STTDHVLSKSNCSSFSTDQPRYP*WRTCGW
Trigger: CCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTG...GTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCAACCTCGCTACCCCTaGTGGAGGACATGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSQPRYP*WRTCGW
Trigger: CCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTG...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp AAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCAAGGCCAGTTCGGGTCTaGCATGCCATAGAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: KLSLWVCAHTPQGSITHARPVRV*HAIEFV
Trigger: AACAAACTCTATGGCATGTCAGACCCGAACTGGCCT...TGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp AAGTACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGCAAGGGCGTGCCGGCTaGCTGGTCCACATACAGCTT +
Preference number: 4 (lower is better)
Translates to: KYYDLIPTPEAPYSTCSWQGRAG*LVHIQL
Trigger: AAGCTGTATGTGGACCAGGCAGCCGGCACGCCCTTG...CCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp AAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCACGGTGTCCTCCTGGATaGAGATCCAGTTGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: KLSLWVCAHTPQGSITHARCPPG*RSSCSH
Trigger: ATGAGAACAACTGGATCTGCATCCAGGAGGACACCG...TGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp ACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACTTCATATCCACCCGGAAGGTCTaGTGGGCCCAGGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: TDHVLSKSNCSSFSTDFISTRKV*WAQVSP
Trigger: CGGGGACACCTGGGCCCAGCAGACCTTCCGGGTGGA...TATGAAGTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR GCA 90 bp GACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCAGGCAGTGTTTTGGTCCACCCGGAAGGTCTaGTGGGCCCAGGTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: DYFKSYQCFKSEEQAVFWSTRKV*WAQVSP
Trigger: CGGGGACACCTGGGCCCAGCAGACCTTCCGGGTGGA...CCAAAACACTGCCTGCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GAGTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGAGCCTCCACTCACACCTaGCTGTTGGGGAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: EFWQEPYLLSIVRPQHHRASTHT*LLGSPG
Trigger: GCCTGGGCTCCCCAACAGGCAGGTGTGAGTGGAGGC...TCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR GCA 90 bp CTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACCGGCCTTCCTCAGGGAAGCAGTTaGAGGTGCCATAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LLTIIFSRSLLMSANTGLPQGSS*RCHSQL
Trigger: AAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGG...AAGGCCGGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp GGGAATTCCCACTTTGGATCCTCCAGGATCTTGAAGGCATCCACGGAGACCTGGCAGATGGAAGGCCGTTaGCTTGACCACTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: GNSHFGSSRILKASTETWQMEGR*LDHFSK
Trigger: TTTGGAAAAGTGGTCAAGGCAACGGCCTTCCATCTG...CCAGGTCTCCGTGGATGCCTTCAAGATCCTGGAGGATCCAAAGTGGGAATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp TCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCCTTTGTGGGTGGTTGACCTaGTTCAGGACGTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: SGCVRTHHKALLHTHPSLCGWLT*FRTLNS
Trigger: AGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACA...AAGGCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp TCCCCATCACTGGGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACAATCTCGGCCAGATACTaGATCCCCTGTGAGATCTGC +
Preference number: 4 (lower is better)
Translates to: SPSLGQLFRPGVLTLLRTISARY*IPCEIC
Trigger: GCAGATCTCACAGGGGATGCAGTATCTGGCCGAGAT...TGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACCCAGTGATGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp ACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACTTCATAGTGGCTGCTCGCCAGTaGCGGGTGGCCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: TDHVLSKSNCSSFSTDFIVAARQ*RVASER
Trigger: CCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCAC...TATGAAGTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp ACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACTTCATACGCTGCTGCGCGCCCTaGTTCGGTCGCGGGACTGAA +
Preference number: 4 (lower is better)
Translates to: TDHVLSKSNCSSFSTDFIRCCAP*FGRGTE
Trigger: TTCAGTCCCGCGACCGAAGCAGGGCGCGCAGCAGCG...TATGAAGTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR CCA 90 bp AGAACAGTACCTGGCCCCTGGCAGGCATGCAAGAGGTACTTCTGGAATATTGAATTCTCCCAGGAGCTATaGTCCAGGCTCCGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: RTVPGPWQACKRYFWNIEFSQEL*SRLRLR
Trigger: CCTTAACCGGAGCCTGGACCATAGCTCCTGGGAGAA...TTCAATATTCCAGAAGTACCTCTTGCATGCCTGCCAGGGGCCAGGTACTGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR CCA 90 bp AATCCGACCCTGGCTCCTCTTCACGTAGGAATCCTCTTCATAAACATCTCGGGATTCTCCCAGGAGCTATaGTCCAGGCTCCGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: NPTLAPLHVGILFINISGFSQEL*SRLRLR
Trigger: CCTTAACCGGAGCCTGGACCATAGCTCCTGGGAGAA...TCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGCCAGGGTCGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR CCA 90 bp GTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCGGACCGAGGTCTCGTTaGGCCAGTGTTCCACCCGGA +
Preference number: 4 (lower is better)
Translates to: VLARTIFTVHCKTTAPQTGPRSR*ASVPPG
Trigger: TCCGGGTGGAACACTGGCCCAACGAGACCTCGGTCC...GGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CCA 90 bp CTATTACACACGCATCCAAGCCTTGGCCTCACAAAATGCCACAATTTTGCTGTTGGACCGAGGTCTCGTTaGGCCAGTGTTCCACCCGGA +
Preference number: 4 (lower is better)
Translates to: LLHTHPSLGLTKCHNFAVGPRSR*ASVPPG
Trigger: TCCGGGTGGAACACTGGCCCAACGAGACCTCGGTCC...AACAGCAAAATTGTGGCATTTTGTGAGGCCAAGGCTTGGATGCGTGTGTAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCGCACGAAGCTGCCGTTaGCCTGGACCGAGGTCTCGT +
Preference number: 4 (lower is better)
Translates to: VLARTIFTVHCKTTAPQTARSCR*PGPRSR
Trigger: ACGAGACCTCGGTCCAGGCCAACGGCAGCTTCGTGC...GGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CCA 90 bp AATTCTGGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTCAGACTTTCCCGATCTaGGCAAATCGGCGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: NSGTPTAPFLHTVLIRGSQTFPI*ANRRAL
Trigger: GAGGGCTCGCCGATTTGCCCAGATCGGGAAAGTCTG...ACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp TGTGGGTGGTTGACCTGCTTCAGGACGTTGAACTCTGACAGCAGGTCTCGCAGCGAATGCAGCTTGTACTaGACGTTGATGCCACTGAAT +
Preference number: 4 (lower is better)
Translates to: CGWLTCFRTLNSDSRSRSECSLY*TLMPLN
Trigger: ATTCAGTGGCATCAACGTCCAGTACAAGCTGCATTC...GCTGCGAGACCTGCTGTCAGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp TTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGAACACGTGAGGATCTAGCGTGCTGCAGTTaGCACCAGAGGAATGCAGCT +
Preference number: 4 (lower is better)
Translates to: FILFSSGVVAAQYRTREDLACCS*HQRNAA
Trigger: AGCTGCATTCCTCTGGTGCCAACTGCAGCACGCTAG...ATCCTCACGTGTTCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AAGGGATTCAATTGCCATCCATTTAACTGGAATCCGACCCTGGCTCCTCTTCACGCCGCCGCAGGGCCTTaGTGTCATTCACAAACAGGA +
Preference number: 4 (lower is better)
Translates to: KGFNCHPFNWNPTLAPLHAAAGP*CHSQTG
Trigger: TCCTGTTTGTGAATGACACCAAGGCCCTGCGGCGGC...GTGAAGAGGAGCCAGGGTCGGATTCCAGTTAAATGGATGGCAATTGAATCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GTGACGTTCACAAAGAAAGGGCCGGTAGACTTTCCATTCTCAGCATGTTTCTTCTCCACAACATCGCAGTaGCCGTCGGGGCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: VTFTKKGPVDFPFSACFFSTTSQ*PSGQVL
Trigger: CAAGACCTGCCCCGACGGCCACTGCGATGTTGTGGA...GAAGAAACATGCTGAGAATGGAAAGTCTACCGGCCCTTTCTTTGTGAACGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTAGGAGCGGGCCATCCTaGCTGCAGGCCCCATACAAT +
Preference number: 4 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSRSGPS*LQAPYN
Trigger: ATTGTATGGGGCCTGCAGCCAGGATGGCCCGCTCCT...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp AGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACGCCTGTAGGCCACGCTaGTGTTGGGGCACAAGAACT +
Preference number: 4 (lower is better)
Translates to: STTDHVLSKSNCSSFSTDACRPR*CWGTRT
Trigger: AGTTCTTGTGCCCCAACATCAGCGTGGCCTACAGGC...GTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp GAAGTTAAAACAAACTACCAAAAACGAGTCTGCCACCTGGGAACTGAACACGGCGGAAGTCTGAGTCATTaGCCAGCACCGCCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: EVKTNYQKRVCHLGTEHGGSLSH*PAPPAA
Trigger: TGCAGCTGGCGGTGCTGGTCAATGACTCAGACTTCC...GCCGTGTTCAGTTCCCAGGTGGCAGACTCGTTTTTGGTAGTTTGTTTTAACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp GAAGTTAAAACAAACTACCAAAAACGAGTCTGCCACCTGGGAACTGAACACGGCCCCCGGAGGCAGTCCTaGGGGCAAATGTTGATGTCT +
Preference number: 4 (lower is better)
Translates to: EVKTNYQKRVCHLGTEHGPRRQS*GQMLMS
Trigger: AGACATCAACATTTGCCCTCAGGACTGCCTCCGGGG...GCCGTGTTCAGTTCCCAGGTGGCAGACTCGTTTTTGGTAGTTTGTTTTAACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp TCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACCGGGGAAGGCCGTTGCCTTaGCCACTTTTCCAAATTCGC +
Preference number: 4 (lower is better)
Translates to: SPLNHHLLQVFADVRKHRGRPLP*PLFQIR
Trigger: GCGAATTTGGAAAAGTGGTCAAGGCAACGGCCTTCC...CCGGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp GAGTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGAGCCGTGTGCGGTACGTaGCGTAGAGATGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: EFWQEPYLLSIVRPQHHRAVCGT*RRDAGP
Trigger: TGGGCCAGCATCTCTACGGCACGTACCGCACACGGC...TCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR GCA 90 bp GTAGTCTCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACCACCCCTAGCGTGCTaGAGTTGGCACCAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: VVSPLNHHLLQVFADVRKPPLAC*SWHQRN
Trigger: ATTCCTCTGGTGCCAACTGCAGCACGCTAGGGGTGG...TTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGAGACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp ACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACTTCATAGCCTGCCTAGAGGTCTaGTGGTCGGTGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: TDHVLSKSNCSSFSTDFIACLEV*WSVATT
Trigger: GGTGGTGGCCACCGACCAGCAGACCTCTAGGCAGGC...TATGAAGTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp CAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGACAGATGGAAGGCCGTTaGCTTGACCACTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: QPPFFILFSSGVVAAQYRQMEGR*LDHFSK
Trigger: TTTGGAAAAGTGGTCAAGGCAACGGCCTTCCATCTG...TCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GCCCTCTTCCCTGATACCACCATCCACATAGTAAAGATGGCATGGAATCTCTCCCAGGATGTTTCTGGCTaGCAAGTCCCGATGAACGAG +
Preference number: 4 (lower is better)
Translates to: ALFPDTTIHIVKMAWNLSQDVSG*QVPMNE
Trigger: CTCGTTCATCGGGACTTGGCAGCCAGAAACATCCTG...GGAGAGATTCCATGCCATCTTTACTATGTGGATGGTGGTATCAGGGAAGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GCCCTCTTCCCTGATACCACCATCCACATAGTAAAGATGGCATGGAATCTCTCCTCCTGCTTCCAGCATTaGAGCATCAGGCGGTACATC +
Preference number: 4 (lower is better)
Translates to: ALFPDTTIHIVKMAWNLSSCFQH*SIRRYI
Trigger: GATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGA...GGAGAGATTCCATGCCATCTTTACTATGTGGATGGTGGTATCAGGGAAGAGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp AGCATTTTTCAAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATCAGCAGCAAAGCCTCTaGTGTCAGCAATTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SIFQTLPLGVCAHTTRLYQQQSL*CQQFWD
Trigger: GTCCCAGAATTGCTGACAGCAGAGGCTTTGCTGCTG...ATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTTGAAAAATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AGACAATTAGGTTATTGGTCAAGGATAAATTGGTCAAGGATAAATTCCCCATCAACTCCACCACGGCGCTaGCGGTGTCGACGCCCGCGG +
Preference number: 4 (lower is better)
Translates to: RQLGYWSRINWSRINSPSTPPRR*RCRRPR
Trigger: CCGCGGGCGTCGACACCGCCAGCGCCGTGGTGGAGT...TGATGGGGAATTTATCCTTGACCAATTTATCCTTGACCAATAACCTAATTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AAGTACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGGCCGCCGCAGGGCCTTaGTGTCATTCACAAACAGGA +
Preference number: 4 (lower is better)
Translates to: KYYDLIPTPEAPYSTCSWAAAGP*CHSQTG
Trigger: TCCTGTTTGTGAATGACACCAAGGCCCTGCGGCGGC...CCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GCTCCTCTTCACGTAGGAATCCTCTTCATAAACATCTCGGGACAAGCCGAAATCAGGTCTGCTGGTCGGTaGCCACCACCATGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: APLHVGILFINISGQAEIRSAGR*PPPCSE
Trigger: TTCACTACATGGTGGTGGCCACCGACCAGCAGACCT...GATTTCGGCTTGTCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp CCAAATTCGCCTTCTCCTAGAGTTTTTCCAAGAACCAAGTTCTTCCGAGGGAATTCCACAACATCGCAGTaGCCGTCGGGGCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PNSPSPRVFPRTKFFRGNSTTSQ*PSGQVL
Trigger: CAAGACCTGCCCCGACGGCCACTGCGATGTTGTGGA...ATTCCCTCGGAAGAACTTGGTTCTTGGAAAAACTCTAGGAGAAGGCGAATTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp CTTCCCAAAAGCTGCCCCCACAAGACTGGAGGAGTGTTGTGCATCTGTGACCACCAAATGTTGATGTCTTaGGTCTCCACAACATCGCAG +
Preference number: 4 (lower is better)
Translates to: LPKSCPHKTGGVLCICDHQMLMS*VSTTSQ
Trigger: CTGCGATGTTGTGGAGACCCAAGACATCAACATTTG...GTGGTCACAGATGCACAACACTCCTCCAGTCTTGTGGGGGCAGCTTTTGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AGCATTTTTCAAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTCTCAGCTGAGGAGATaGGTGGCTTGTGGGCAAACT +
Preference number: 4 (lower is better)
Translates to: SIFQTLPLGVCAHTTRLYSQLRR*VACGQT
Trigger: AGTTTGCCCACAAGCCACCCATCTCCTCAGCTGAGA...ATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTTGAAAAATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AAATCACCGGCTATCAGAAGTAAAACCACCTTGGAAGTTAAAACAAACTACCAACTGACCGGGAAGGCCTaGGCGGGCCTCCGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: KSPAIRSKTTLEVKTNYQLTGKA*AGLRKV
Trigger: GACCTTCCGGAGGCCCGCCCAGGCCTTCCCGGTCAG...TTGGTAGTTTGTTTTAACTTCCAAGGTGGTTTTACTTCTGATAGCCGGTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACGCATCCACGGAGACCTaGTTCTCCATGGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: STTDHVLSKSNCSSFSTDASTET*FSMESS
Trigger: GCTGGACTCCATGGAGAACCAGGTCTCCGTGGATGC...GTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GTAGTCTCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAAGCATCCACGGAGACCTaGTTCTCCATGGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: VVSPLNHHLLQVFADVRKASTET*FSMESS
Trigger: GCTGGACTCCATGGAGAACCAGGTCTCCGTGGATGC...TTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGAGACTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GAACGAGCTTCATCTCGGCCAGATACTGCATCCCCTGTGAGATCTGCCAGGCAAAGGGAATTCCCACTTTaGATCCTCCAGGATCTTGAA +
Preference number: 4 (lower is better)
Translates to: ERASSRPDTASPVRSARQREFPL*ILQDLE
Trigger: TTCAAGATCCTGGAGGATCCAAAGTGGGAATTCCCT...TTGCCTGGCAGATCTCACAGGGGATGCAGTATCTGGCCGAGATGAAGCTCGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp CCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTATTGATGACATGTGGGTaGTTGACCTGCTTCAGGACG +
Preference number: 4 (lower is better)
Translates to: PTAPFLHTVLIRGSGCSVLMTCG*LTCFRT
Trigger: CGTCCTGAAGCAGGTCAACCACCCACATGTCATCAA...TACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp CTATTACACACGCATCCAAGCCTTGGCCTCACAAAATGCCACAATTTTGCTGTTAGGAGCGGGCCATCCTaGCTGCAGGCCCCATACAAT +
Preference number: 4 (lower is better)
Translates to: LLHTHPSLGLTKCHNFAVRSGPS*LQAPYN
Trigger: ATTGTATGGGGCCTGCAGCCAGGATGGCCCGCTCCT...AACAGCAAAATTGTGGCATTTTGTGAGGCCAAGGCTTGGATGCGTGTGTAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp ACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACTTCATAGCCCGCTCATCCGGGTaGTCCAGGGAGCTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: TDHVLSKSNCSSFSTDFIARSSG*SRELEL
Trigger: CAACTCCAGCTCCCTGGACCACCCGGATGAGCGGGC...TATGAAGTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GAACACAGAATGTTGGTGGTCACTGATGGACACAGACCAACACTGGGTGCTGCTTGCCATCCATTTAACTaGAATCCGACCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: EHRMLVVTDGHRPTLGAACHPFN*NPTLAP
Trigger: AGGAGCCAGGGTCGGATTCCAGTTAAATGGATGGCA...AGCAGCACCCAGTGTTGGTCTGTGTCCATCAGTGACCACCAACATTCTGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp CCACTGCTTTCGCCTCTACTTGGCTGTGGGGTGTGCTGCAGGCTGGTGGCAGGTGAAGTAAAACCACCTTaGAAGTTAAAACAAACTACC +
Preference number: 4 (lower is better)
Translates to: PLLSPLLGCGVCCRLVAGEVKPP*KLKQTT
Trigger: GGTAGTTTGTTTTAACTTCCAAGGTGGTTTTACTTC...ACCTGCCACCAGCCTGCAGCACACCCCACAGCCAAGTAGAGGCGAAAGCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp GAAGTTAAAACAAACTACCAAAAACGAGTCTGCCACCTGGGAACTGAACACGGCGATCCTCCAGGATCTTaGAGGCATCCACGGAGACCT +
Preference number: 4 (lower is better)
Translates to: EVKTNYQKRVCHLGTEHGDPPGS*RHPRRP
Trigger: AGGTCTCCGTGGATGCCTTCAAGATCCTGGAGGATC...GCCGTGTTCAGTTCCCAGGTGGCAGACTCGTTTTTGGTAGTTTGTTTTAACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp ACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACTTCATATGGCGTACTCCACGATaGGGAGGAGCGGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: TDHVLSKSNCSSFSTDFIWRTPR*GGAGHP
Trigger: AGGATGGCCCGCTCCTCCTCATCGTGGAGTACGCCA...TATGAAGTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp AGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACGATCTGCCAGGCAAATaGGATGAGGTCGCCCATGGT +
Preference number: 4 (lower is better)
Translates to: STTDHVLSKSNCSSFSTDDLPGK*DEVAHG
Trigger: ACCATGGGCGACCTCATCTCATTTGCCTGGCAGATC...GTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp GTAGTCTCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACGGTCTTCAGAAGGTTaGAGAGCCGCTCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: VVSPLNHHLLQVFADVRKRSSEG*RAAQEE
Trigger: TTCCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCG...TTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGAGACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp TGTAATCAGAGGTGTAGCAGTCCTTGGTCATTGTCATTGCTACTTCTAACACAGCAAGGGCGTGCCGGCTaGCTGGTCCACATACAGCTT +
Preference number: 4 (lower is better)
Translates to: CNQRCSSPWSLSLLLLTQQGRAG*LVHIQL
Trigger: AAGCTGTATGTGGACCAGGCAGCCGGCACGCCCTTG...CTGTGTTAGAAGTAGCAATGACAATGACCAAGGACTGCTACACCTCTGATTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTTCTCATGCAGCCGTGTaGGGTACGTGCCGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSSHAAV*GTCRRD
Trigger: ATCTCTACGGCACGTACCGCACACGGCTGCATGAGA...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp ATAGTAAAGATGGCATGGAATCTCTCCATTGTGCTAAATCTAGGAATCATCTTACCAGGGCCCAGCGCGTaGTCACCTCCAGGCTGTCCG +
Preference number: 4 (lower is better)
Translates to: IVKMAWNLSIVLNLGIILPGPSA*SPPGCP
Trigger: CGGACAGCCTGGAGGTGAGCACGCGCTGGGCCCTGG...TAAGATGATTCCTAGATTTAGCACAATGGAGAGATTCCATGCCATCTTTACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp AGACAATTAGGTTATTGGTCAAGGATAAATTGGTCAAGGATAAATTCCCCATCACGCCGGCGTGCACGGTaGACACGGCCACCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: RQLGYWSRINWSRINSPSRRRAR*TRPPAR
Trigger: ACGAGCTGGTGGCCGTGTGCACCGTGCACGCCGGCG...TGATGGGGAATTTATCCTTGACCAATTTATCCTTGACCAATAACCTAATTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTTGCAGGTACCACGTCTaGATCGAAGACACGCAGCGT +
Preference number: 4 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSCRYHV*IEDTQR
Trigger: ACGCTGCGTGTCTTCGATGCAGACGTGGTACCTGCA...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR GCA 90 bp GAGTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCGCCAGCTGCATGGTaGGGTTCTCCGAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: EFWQEPYLLSIVRPQHHRPPAAW*GSPRWR
Trigger: TCTCCATCTCGGAGAACCGCACCATGCAGCTGGCGG...TCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR GCA 90 bp TGCTGTCAGCAATTCTGGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATTGTGGTAGCAGTGGATaGAGAAGGCAGACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: CCQQFWDSNSPLSSYCSHCGSSG*RRQTAA
Trigger: TGCTGCTGTCTGCCTTCTGCATCCACTGCTACCACA...ATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGAATTGCTGACAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GTCTCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACTGTGGTAGCAGTGGATaGAGAAGGCAGACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VSPLNHHLLQVFADVRKHCGSSG*RRQTAA
Trigger: TGCTGCTGTCTGCCTTCTGCATCCACTGCTACCACA...GTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp AGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACGGTACATCTCCTCGCTaGAGTTGTCTGGCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: STTDHVLSKSNCSSFSTDGTSPR*SCLASP
Trigger: TGGAGAGGCCAGACAACTGCAGCGAGGAGATGTACC...GTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp AGAGTTTTTCCAAGAACCAAGTTCTTCCGAGGGAATTCCCACTTTGGATCCTCCGGTACATCTCCTCGCTaGAGTTGTCTGGCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RVFPRTKFFRGNSHFGSSGTSPR*SCLASP
Trigger: TGGAGAGGCCAGACAACTGCAGCGAGGAGATGTACC...GGAGGATCCAAAGTGGGAATTCCCTCGGAAGAACTTGGTTCTTGGAAAAACTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp TGGGCCCGGGGGACAAATGTGTCTTGTGAGCCCTCTTCCCTGATACCACCATCCCTTGGCCTCACAAAATaGCACAATTTTGCTGTTTTT +
Preference number: 4 (lower is better)
Translates to: WARGTNVSCEPSSLIPPSLGLTK*HNFAVF
Trigger: AAAAACAGCAAAATTGTGGCATTTTGTGAGGCCAAG...GGATGGTGGTATCAGGGAAGAGGGCTCACAAGACACATTTGTCCCCCGGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AGACAATTAGGTTATTGGTCAAGGATAAATTGGTCAAGGATAAATTCCCCATCAGGACGCGACGGACACTaGGGGCGCGACGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: RQLGYWSRINWSRINSPSGRDGH*GRDARS
Trigger: GGAACGTGCGTCGCGCCCCCAGTGTCCGTCGCGTCC...TGATGGGGAATTTATCCTTGACCAATTTATCCTTGACCAATAACCTAATTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTAGGCCGGTGTCCTCCTaGATGCAGATCCAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSRPVSS*MQIQLF
Trigger: GAACAACTGGATCTGCATCCAGGAGGACACCGGCCT...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCACCGACACGTTGAAGTaGAGCAAGAGGACGCCCGCT +
Preference number: 4 (lower is better)
Translates to: VLARTIFTVHCKTTAPQTTDTLK*SKRTPA
Trigger: AGCGGGCGTCCTCTTGCTCCACTTCAACGTGTCGGT...GGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CCA 90 bp TCCCCATCACTGGGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACAATGCCACTGAATGCCTaGCAGTTTTCCACACAGACT +
Preference number: 4 (lower is better)
Translates to: SPSLGQLFRPGVLTLLRTMPLNA*QFSTQT
Trigger: AGTCTGTGTGGAAAACTGCCAGGCATTCAGTGGCAT...TGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACCCAGTGATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GAGTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGATCCACAACATCGCAGTaGCCGTCGGGGCAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: EFWQEPYLLSIVRPQHHRSTTSQ*PSGQVL
Trigger: CAAGACCTGCCCCGACGGCCACTGCGATGTTGTGGA...TCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CCA 90 bp ACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACTTCATAAGACCTGGTTCTCCATaGAGTCCAGCGAGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: TDHVLSKSNCSSFSTDFIRPGSP*SPARAG
Trigger: GCCGGCCCTCGCTGGACTCCATGGAGAACCAGGTCT...TATGAAGTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp TCTGGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCCAATTTGATGACATGTaGGTGGTTGACCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SGTPTAPFLHTVLIRGSGQFDDM*VVDLLQ
Trigger: CTGAAGCAGGTCAACCACCCACATGTCATCAAATTG...GCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCAGGCTGAGTGGTGCTaGTGGCTCCTTTCTCAACTG +
Preference number: 4 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSQAEWC*WLLSQL
Trigger: CAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTG...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp TCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCCTTAACACAGAATGTTGGTaGTCACTGATGGACACAGAC +
Preference number: 4 (lower is better)
Translates to: SGCVRTHHKALLHTHPSLNTECW*SLMDTD
Trigger: GTCTGTGTCCATCAGTGACCACCAACATTCTGTGTT...AAGGCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
3UTR CAA 72 bp TACCCTGCTCTGCCTTTCAGATGGAAGGCCGTTGCCTaGACCACTTTTCCAAATTCGCCTTCTCCTAGAGTT +
Preference number: 4 (lower is better)
Translates to: YPALPFRWKAVA*TTFPNSPSPRV
Trigger: AACTCTAGGAGAAGGCGAATTTGGAAAAGTGGTCAAGGCAACGGCCTTCCATCTGAAAGGCAGAGCAGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp AGACAATTAGGTTATTGGTCAAGGATAAATTGGTCAAGGATAAATTCCCCATCATGGGCAGGTGCAGGCTaGCCGGCAGCACCGACACGT +
Preference number: 4 (lower is better)
Translates to: RQLGYWSRINWSRINSPSWAGAG*PAAPTR
Trigger: ACGTGTCGGTGCTGCCGGTCAGCCTGCACCTGCCCA...TGATGGGGAATTTATCCTTGACCAATTTATCCTTGACCAATAACCTAATTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp ACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACTTCATAGCAGCACCGAGACGATaGAGGAGAAGAGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: TDHVLSKSNCSSFSTDFIAAPRR*RRRGQR
Trigger: CCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCTGC...TATGAAGTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp TGTAATCAGAGGTGTAGCAGTCCTTGGTCATTGTCATTGCTACTTCTAACACAGCAGGACGTTGAACTCTaGCAGCAGGTCTCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: CNQRCSSPWSLSLLLLTQQDVEL*QQVSQL
Trigger: GAGCTGCGAGACCTGCTGTCAGAGTTCAACGTCCTG...CTGTGTTAGAAGTAGCAATGACAATGACCAAGGACTGCTACACCTCTGATTACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp GGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTAGTGTTGTGCATCTGTaGCCACAAACAAGCAATGAA +
Preference number: 4 (lower is better)
Translates to: GLQQPPFFILFSSGVVAASVVHL*PQTSNE
Trigger: TTCATTGCTTGTTTGTGGTCACAGATGCACAACACT...AGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp ATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCATGTTCTTTCAAAAACCCCGGGGAGCAGCGTaGTTGTGTACCGCCTCACCA +
Preference number: 4 (lower is better)
Translates to: IFTVHCKTTAPQTMFFQKPRGAA*LCTASP
Trigger: TGGTGAGGCGGTACACAAGCACGCTGCTCCCCGGGG...TTTTTGAAAGAACATGGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR GCA 90 bp AAACAAGCAATGAAGAATGACAAGAAGCTTATGAGTCATGGTCAGAATCTAAGATCGCCCGCACGAAGCTaGCGTTGGCCTGGACCGAGG +
Preference number: 4 (lower is better)
Translates to: KQAMKNDKKLMSHGQNLRSPARS*RWPGPR
Trigger: CCTCGGTCCAGGCCAACGGCAGCTTCGTGCGGGCGA...TCTTAGATTCTGACCATGACTCATAAGCTTCTTGTCATTCTTCATTGCTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCAGGCAGTGTTTTGGCCGCCAGCTGCATGGTaGGGTTCTCCGAGATGGAGA +
Preference number: 4 (lower is better)
Translates to: DYFKSYQCFKSEEQAVFWPPAAW*GSPRWR
Trigger: TCTCCATCTCGGAGAACCGCACCATGCAGCTGGCGG...CCAAAACACTGCCTGCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp AGCATTTTTCAAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATGTTGATGCCACTGAATaGCTGGCAGTTTTCCACACA +
Preference number: 4 (lower is better)
Translates to: SIFQTLPLGVCAHTTRLYVDATE*LAVFHT
Trigger: TGTGTGGAAAACTGCCAGGCATTCAGTGGCATCAAC...ATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTTGAAAAATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GTGACGTTCACAAAGAAAGGGCCGGTAGACTTTCCATTCTCAGCATGTTTCTTCCACCGTGGTGTACCCTaGTCTGCCTTTCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: VTFTKKGPVDFPFSACFFHRGVP*SAFQME
Trigger: TTCCATCTGAAAGGCAGAGCAGGGTACACCACGGTG...GAAGAAACATGCTGAGAATGGAAAGTCTACCGGCCCTTTCTTTGTGAACGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp ACAGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGCACCGTGGTGTACCCTaGTCTGCCTTTCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: TAPQTMFFQKATAPALALHRGVP*SAFQME
Trigger: TTCCATCTGAAAGGCAGAGCAGGGTACACCACGGTG...CAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCAGGATGTTTCTGGCTaGCAAGTCCCGATGAACGAG +
Preference number: 4 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSQDVSG*QVPMNE
Trigger: CTCGTTCATCGGGACTTGGCAGCCAGAAACATCCTG...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp AGAGTTTTTCCAAGAACCAAGTTCTTCCGAGGGAATTCCCACTTTGGATCCTCCCAGGATGTTTCTGGCTaGCAAGTCCCGATGAACGAG +
Preference number: 4 (lower is better)
Translates to: RVFPRTKFFRGNSHFGSSQDVSG*QVPMNE
Trigger: CTCGTTCATCGGGACTTGGCAGCCAGAAACATCCTG...GGAGGATCCAAAGTGGGAATTCCCTCGGAAGAACTTGGTTCTTGGAAAAACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp AAGTACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGCTTTTGTCCGGCTCCTaGTTCCAGCATTGCAGCATC +
Preference number: 4 (lower is better)
Translates to: KYYDLIPTPEAPYSTCSWLLSGS*FQHCSI
Trigger: GATGCTGCAATGCTGGAAGCAGGAGCCGGACAAAAG...CCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp AAATCACCGGCTATCAGAAGTAAAACCACCTTGGAAGTTAAAACAAACTACCAAGGAGGGCCTTGTCTCTaGGAAGCAGAGCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: KSPAIRSKTTLEVKTNYQGGPCL*EAELPG
Trigger: CCCCGGGAGCTCTGCTTCCCAGAGACAAGGCCCTCC...TTGGTAGTTTGTTTTAACTTCCAAGGTGGTTTTACTTCTGATAGCCGGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GAGTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACAGACTTTCCCGATCTaGGCAAATCGGCGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: EFWQEPYLLSIVRPQHHRQTFPI*ANRRAL
Trigger: GAGGGCTCGCCGATTTGCCCAGATCGGGAAAGTCTG...TCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CCA 90 bp AATCCGACCCTGGCTCCTCTTCACGTAGGAATCCTCTTCATAAACATCTCGGGAATGCCACTGAATGCCTaGCAGTTTTCCACACAGACT +
Preference number: 4 (lower is better)
Translates to: NPTLAPLHVGILFINISGMPLNA*QFSTQT
Trigger: AGTCTGTGTGGAAAACTGCCAGGCATTCAGTGGCAT...TCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGCCAGGGTCGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp ACAGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGTCTCAGCTGAGGAGATaGGTGGCTTGTGGGCAAACT +
Preference number: 4 (lower is better)
Translates to: TAPQTMFFQKATAPALALSQLRR*VACGQT
Trigger: AGTTTGCCCACAAGCCACCCATCTCCTCAGCTGAGA...CAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GTAGTCTCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAATCTCAGCTGAGGAGATaGGTGGCTTGTGGGCAAACT +
Preference number: 4 (lower is better)
Translates to: VVSPLNHHLLQVFADVRKSQLRR*VACGQT
Trigger: AGTTTGCCCACAAGCCACCCATCTCCTCAGCTGAGA...TTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGAGACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GGGAATTCCCACTTTGGATCCTCCAGGATCTTGAAGGCATCCACGGAGACCTGGGTTCAGAGCAGACTTTaGTTTTGTTCAGACCAGAAA +
Preference number: 4 (lower is better)
Translates to: GNSHFGSSRILKASTETWVQSRL*FCSDQK
Trigger: TTTCTGGTCTGAACAAAACCAAAGTCTGCTCTGAAC...CCAGGTCTCCGTGGATGCCTTCAAGATCCTGGAGGATCCAAAGTGGGAATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR CCA 90 bp TCCCCATCACTGGGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACAGTGAACACAGAATGTTaGTGGTCACTGATGGACACA +
Preference number: 4 (lower is better)
Translates to: SPSLGQLFRPGVLTLLRTVNTEC*WSLMDT
Trigger: TGTGTCCATCAGTGACCACCAACATTCTGTGTTCAC...TGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACCCAGTGATGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AATTCTGGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTCACGCATCCAAGCCTTaGCCTCACAAAATGCCACAA +
Preference number: 4 (lower is better)
Translates to: NSGTPTAPFLHTVLIRGSHASKP*PHKMPQ
Trigger: TTGTGGCATTTTGTGAGGCCAAGGCTTGGATGCGTG...ACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp ATAGTAAAGATGGCATGGAATCTCTCCATTGTGCTAAATCTAGGAATCATCTTAAGAGCTCCCGGGGCTTaGGGGAGCTGCAGGCTGGAA +
Preference number: 4 (lower is better)
Translates to: IVKMAWNLSIVLNLGIILRAPGA*GSCRLE
Trigger: TTCCAGCCTGCAGCTCCCTCAAGCCCCGGGAGCTCT...TAAGATGATTCCTAGATTTAGCACAATGGAGAGATTCCATGCCATCTTTACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp AAATCACCGGCTATCAGAAGTAAAACCACCTTGGAAGTTAAAACAAACTACCAACCTCACCAGCTCCCCTaGTGCAGGTACCACGTCTGC +
Preference number: 4 (lower is better)
Translates to: KSPAIRSKTTLEVKTNYQPHQLP*CRYHVC
Trigger: GCAGACGTGGTACCTGCATCAGGGGAGCTGGTGAGG...TTGGTAGTTTGTTTTAACTTCCAAGGTGGTTTTACTTCTGATAGCCGGTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp AGAGTTTTTCCAAGAACCAAGTTCTTCCGAGGGAATTCCCACTTTGGATCCTCCTGGAGAAGTTCCTGGTaGTCCCTTTGCCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: RVFPRTKFFRGNSHFGSSWRSSW*SLCHLL
Trigger: AAGGAGATGGCAAAGGGATCACCAGGAACTTCTCCA...GGAGGATCCAAAGTGGGAATTCCCTCGGAAGAACTTGGTTCTTGGAAAAACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR TCA 90 bp GTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCGGAAGGCCGTTGCCTTaGCCACTTTTCCAAATTCGC +
Preference number: 4 (lower is better)
Translates to: VLARTIFTVHCKTTAPQTGRPLP*PLFQIR
Trigger: GCGAATTTGGAAAAGTGGTCAAGGCAACGGCCTTCC...GGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR TCA 90 bp AATTCTGGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTCGCAGTCTCTCATTCTaGATAAGGACAGGTCATCAG +
Preference number: 4 (lower is better)
Translates to: NSGTPTAPFLHTVLIRGSRSLSF*IRTGHQ
Trigger: CTGATGACCTGTCCTTATTCAGAATGAGAGACTGCG...ACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp GTGACGTTCACAAAGAAAGGGCCGGTAGACTTTCCATTCTCAGCATGTTTCTTCGACAAATGTGTCTTGTaGGCCCTCTTCCCTGATACC +
Preference number: 4 (lower is better)
Translates to: VTFTKKGPVDFPFSACFFDKCVL*ALFPDT
Trigger: GGTATCAGGGAAGAGGGCTCACAAGACACATTTGTC...GAAGAAACATGCTGAGAATGGAAAGTCTACCGGCCCTTTCTTTGTGAACGTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp GAAGTTAAAACAAACTACCAAAAACGAGTCTGCCACCTGGGAACTGAACACGGCAAACACAGGAAGAGCTaGTCCATGGGCCTTTCACAC +
Preference number: 4 (lower is better)
Translates to: EVKTNYQKRVCHLGTEHGKHRKS*SMGLSH
Trigger: GTGTGAAAGGCCCATGGATCAGCTCTTCCTGTGTTT...GCCGTGTTCAGTTCCCAGGTGGCAGACTCGTTTTTGGTAGTTTGTTTTAACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GAAGTTAAAACAAACTACCAAAAACGAGTCTGCCACCTGGGAACTGAACACGGCTTGGCACCAGAGGAATaGAGCTTGTACTGGACGTTG +
Preference number: 4 (lower is better)
Translates to: EVKTNYQKRVCHLGTEHGLAPEE*SLYWTL
Trigger: CAACGTCCAGTACAAGCTGCATTCCTCTGGTGCCAA...GCCGTGTTCAGTTCCCAGGTGGCAGACTCGTTTTTGGTAGTTTGTTTTAACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCAGGCAGTGTTTTGGCCACCCCTAGCGTGCTaGAGTTGGCACCAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: DYFKSYQCFKSEEQAVFWPPLAC*SWHQRN
Trigger: ATTCCTCTGGTGCCAACTGCAGCACGCTAGGGGTGG...CCAAAACACTGCCTGCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GAGTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCTTTGCCATCTCCTTaGCTCCACTCACACCTGCCT +
Preference number: 4 (lower is better)
Translates to: EFWQEPYLLSIVRPQHHRPLPSP*LHSHLP
Trigger: AGGCAGGTGTGAGTGGAGGCAAGGAGATGGCAAAGG...TCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR GCA 90 bp ATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCATGTTCTTTCAAAAAGTCCCCCAACAATGCTaGCCCGGAGGCAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: IFTVHCKTTAPQTMFFQKVPQQC*PGGSPE
Trigger: CTCAGGACTGCCTCCGGGGCAGCATTGTTGGGGGAC...TTTTTGAAAGAACATGGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR GCA 90 bp GTAGTCTCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAATGTGGGTGGTTGACCTaGTTCAGGACGTTGAACTCT +
Preference number: 4 (lower is better)
Translates to: VVSPLNHHLLQVFADVRKCGWLT*FRTLNS
Trigger: AGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACA...TTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGAGACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp AAATCACCGGCTATCAGAAGTAAAACCACCTTGGAAGTTAAAACAAACTACCAAAGCTGGAGTTGCGGCTaGCTCCACTGCCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: KSPAIRSKTTLEVKTNYQSWSCG*LHCPGS
Trigger: GCTACCTGGGCAGTGGAGGCAGCCGCAACTCCAGCT...TTGGTAGTTTGTTTTAACTTCCAAGGTGGTTTTACTTCTGATAGCCGGTGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AGACAATTAGGTTATTGGTCAAGGATAAATTGGTCAAGGATAAATTCCCCATCAGGCAGCAGGCGGAACTaGTGGAAGGTGCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: RQLGYWSRINWSRINSPSGSRRN*WKVPGG
Trigger: ACCCCCAGGCACCTTCCACCAGTTCCGCCTGCTGCC...TGATGGGGAATTTATCCTTGACCAATTTATCCTTGACCAATAACCTAATTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AGCATTTTTCAAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATGAATGCAGCTTGTACTaGACGTTGATGCCACTGAAT +
Preference number: 4 (lower is better)
Translates to: SIFQTLPLGVCAHTTRLYECSLY*TLMPLN
Trigger: ATTCAGTGGCATCAACGTCCAGTACAAGCTGCATTC...ATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTTGAAAAATGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCTCTCAGCTGAGGAGATaGGTGGCTTGTGGGCAAACT +
Preference number: 4 (lower is better)
Translates to: VLARTIFTVHCKTTAPQTSQLRR*VACGQT
Trigger: AGTTTGCCCACAAGCCACCCATCTCCTCAGCTGAGA...GGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CCA 90 bp AAACATCTCGGGACAAGCCGAAATCCGAAATCTTCATCTTCCGCCCCTCAGCTAAGGGAATTCCCACTTTaGATCCTCCAGGATCTTGAA +
Preference number: 4 (lower is better)
Translates to: KHLGTSRNPKSSSSAPQLREFPL*ILQDLE
Trigger: TTCAAGATCCTGGAGGATCCAAAGTGGGAATTCCCT...TAGCTGAGGGGCGGAAGATGAAGATTTCGGATTTCGGCTTGTCCCGAGATGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp ACAGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGTTGATGACATGTGGGTaGTTGACCTGCTTCAGGACG +
Preference number: 4 (lower is better)
Translates to: TAPQTMFFQKATAPALALLMTCG*LTCFRT
Trigger: CGTCCTGAAGCAGGTCAACCACCCACATGTCATCAA...CAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp CTTCTCCTCCTCAGGGAAGCAGTTGCAGGTGCCATAGCCAGCTTTAATCCCCCGTGCCTAAATGTAAACTaGATGCAAAGTCAGACATTT +
Preference number: 4 (lower is better)
Translates to: LLLLREAVAGAIASFNPPCLNVN*MQSQTF
Trigger: AAATGTCTGACTTTGCATCCAGTTTACATTTAGGCA...CGGGGGATTAAAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGGAGGAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR CCA 90 bp GTAGTCTCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAAGCTGAGTGGTGCTGGTaGCTCCTTTCTCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: VVSPLNHHLLQVFADVRKAEWCW*LLSQLN
Trigger: ATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGC...TTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGAGACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR CCA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCCAAAAGAAGGAGTTTTaGCAAGAACCATATTTACTG +
Preference number: 4 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTQKKEF*QEPYLL
Trigger: CAGTAAATATGGTTCTTGCCAAAACTCCTTCTTTTG...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CCA 90 bp TCCCCATCACTGGGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACAAGGTGTAGCAGTCCTTaGTCATTGTCATTGCTACTT +
Preference number: 4 (lower is better)
Translates to: SPSLGQLFRPGVLTLLRTRCSSP*SLSLLL
Trigger: AAGTAGCAATGACAATGACCAAGGACTGCTACACCT...TGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACCCAGTGATGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp ATAGTAAAGATGGCATGGAATCTCTCCATTGTGCTAAATCTAGGAATCATCTTATGTCCTCCTTCCGCTTaGACTCCACCACGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: IVKMAWNLSIVLNLGIILCPPSA*TPPRRW
Trigger: CCAGCGCCGTGGTGGAGTTCAAGCGGAAGGAGGACA...TAAGATGATTCCTAGATTTAGCACAATGGAGAGATTCCATGCCATCTTTACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp CAGTATTTGAATGAGACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCGGAACTGGTGGAAGGTaGCTGGGGGTCGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QYLNETILSPISALSLKSGTGGR*LGVGSP
Trigger: GGGAGAACCGACCCCCAGGCACCTTCCACCAGTTCC...GCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTCTCATTCAAATACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp ACAGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGGTTGATGCCACTGAATaGCTGGCAGTTTTCCACACA +
Preference number: 4 (lower is better)
Translates to: TAPQTMFFQKATAPALALVDATE*LAVFHT
Trigger: TGTGTGGAAAACTGCCAGGCATTCAGTGGCATCAAC...CAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp AGAGTTTTTCCAAGAACCAAGTTCTTCCGAGGGAATTCCCACTTTGGATCCTCCGTTGATGCCACTGAATaGCTGGCAGTTTTCCACACA +
Preference number: 4 (lower is better)
Translates to: RVFPRTKFFRGNSHFGSSVDATE*LAVFHT
Trigger: TGTGTGGAAAACTGCCAGGCATTCAGTGGCATCAAC...GGAGGATCCAAAGTGGGAATTCCCTCGGAAGAACTTGGTTCTTGGAAAAACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp CCAAATTCGCCTTCTCCTAGAGTTTTTCCAAGAACCAAGTTCTTCCGAGGGAATTTGGCACCAGAGGAATaGAGCTTGTACTGGACGTTG +
Preference number: 4 (lower is better)
Translates to: PNSPSPRVFPRTKFFRGNLAPEE*SLYWTL
Trigger: CAACGTCCAGTACAAGCTGCATTCCTCTGGTGCCAA...ATTCCCTCGGAAGAACTTGGTTCTTGGAAAAACTCTAGGAGAAGGCGAATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR GCA 90 bp GACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCAGGCAGTGTTTTGGCCTTTGCCATCTCCTTaGCTCCACTCACACCTGCCT +
Preference number: 4 (lower is better)
Translates to: DYFKSYQCFKSEEQAVFWPLPSP*LHSHLP
Trigger: AGGCAGGTGTGAGTGGAGGCAAGGAGATGGCAAAGG...CCAAAACACTGCCTGCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GAGTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGATGTGGTAGCAGTGGATaGAGAAGGCAGACAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EFWQEPYLLSIVRPQHHRCGSSG*RRQTAA
Trigger: TGCTGCTGTCTGCCTTCTGCATCCACTGCTACCACA...TCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR GCA 90 bp AGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACCAGATGGAAGGCCGTTaGCTTGACCACTTTTCCAAA +
Preference number: 4 (lower is better)
Translates to: STTDHVLSKSNCSSFSTDQMEGR*LDHFSK
Trigger: TTTGGAAAAGTGGTCAAGGCAACGGCCTTCCATCTG...GTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp GACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCAGGCAGTGTTTTGGGGTACATCTCCTCGCTaGAGTTGTCTGGCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: DYFKSYQCFKSEEQAVFWGTSPR*SCLASP
Trigger: TGGAGAGGCCAGACAACTGCAGCGAGGAGATGTACC...CCAAAACACTGCCTGCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AGACAATTAGGTTATTGGTCAAGGATAAATTGGTCAAGGATAAATTCCCCATCAGGCGTGCCGGCTGCCTaGTCCACATACAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RQLGYWSRINWSRINSPSGVPAA*STYSFS
Trigger: GGAGAAGCTGTATGTGGACCAGGCAGCCGGCACGCC...TGATGGGGAATTTATCCTTGACCAATTTATCCTTGACCAATAACCTAATTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp ATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCATGTTCTTTCAAAAACCCGCTCCTGGGCCCTaGAAGTCTGAGTCATTGACC +
Preference number: 4 (lower is better)
Translates to: IFTVHCKTTAPQTMFFQKPAPGP*KSESLT
Trigger: GGTCAATGACTCAGACTTCCAGGGCCCAGGAGCGGG...TTTTTGAAAGAACATGGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CCA 90 bp ACAGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGATGCCACTGAATGCCTaGCAGTTTTCCACACAGACT +
Preference number: 4 (lower is better)
Translates to: TAPQTMFFQKATAPALALMPLNA*QFSTQT
Trigger: AGTCTGTGTGGAAAACTGCCAGGCATTCAGTGGCAT...CAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCAGGCAGTGTTTTGGAGGTCTGCTGGTCGGTaGCCACCACCATGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: DYFKSYQCFKSEEQAVFWRSAGR*PPPCSE
Trigger: TTCACTACATGGTGGTGGCCACCGACCAGCAGACCT...CCAAAACACTGCCTGCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GCTCCTCTTCACGTAGGAATCCTCTTCATAAACATCTCGGGACAAGCCGAAATCCAATTTGATGACATGTaGGTGGTTGACCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: APLHVGILFINISGQAEIQFDDM*VVDLLQ
Trigger: CTGAAGCAGGTCAACCACCCACATGTCATCAAATTG...GATTTCGGCTTGTCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CCA 90 bp GTAGTCTCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAATATTCAACCTGTTCTTaGTCTCCCCTGAGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: VVSPLNHHLLQVFADVRKYSTCS*SPLRVP
Trigger: CGGAACTCTCAGGGGAGACCAAGAACAGGTTGAATA...TTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGAGACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR CCA 90 bp GGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTATAGTAAAGATGGCATaGAATCTCTCCATTGTGCTA +
Preference number: 4 (lower is better)
Translates to: GLQQPPFFILFSSGVVAAIVKMA*NLSIVL
Trigger: TAGCACAATGGAGAGATTCCATGCCATCTTTACTAT...AGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCAGGCAGTGTTTTGGCTGCCCCCACAAGACTaGAGGAGTGTTGTGCATCTG +
Preference number: 4 (lower is better)
Translates to: DYFKSYQCFKSEEQAVFWLPPQD*RSVVHL
Trigger: CAGATGCACAACACTCCTCCAGTCTTGTGGGGGCAG...CCAAAACACTGCCTGCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp CAGTATTTGAATGAGACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCCGCGGTTGCGGACACTaGGCTTCTCCCAGGAGCTAT +
Preference number: 4 (lower is better)
Translates to: QYLNETILSPISALSLKSRGCGH*ASPRSY
Trigger: ATAGCTCCTGGGAGAAGCTCAGTGTCCGCAACCGCG...GCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTCTCATTCAAATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp GAGTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGATGGAGAGGTTCCGGTTaGGAACCAGCCTATAGTCAT +
Preference number: 4 (lower is better)
Translates to: EFWQEPYLLSIVRPQHHRWRGSG*EPAYSH
Trigger: ATGACTATAGGCTGGTTCTCAACCGGAACCTCTCCA...TCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR TCA 90 bp AAACAAGCAATGAAGAATGACAAGAAGCTTATGAGTCATGGTCAGAATCTAAGAGCAGCACCGAGACGATaGAGGAGAAGAGGACAGCGG +
Preference number: 4 (lower is better)
Translates to: KQAMKNDKKLMSHGQNLRAAPRR*RRRGQR
Trigger: CCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCTGC...TCTTAGATTCTGACCATGACTCATAAGCTTCTTGTCATTCTTCATTGCTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp CTATTACACACGCATCCAAGCCTTGGCCTCACAAAATGCCACAATTTTGCTGTTAATGTTGGTGGTCACTaGTGGACACAGACCAACACT +
Preference number: 4 (lower is better)
Translates to: LLHTHPSLGLTKCHNFAVNVGGH*WTQTNT
Trigger: AGTGTTGGTCTGTGTCCATCAGTGACCACCAACATT...AACAGCAAAATTGTGGCATTTTGTGAGGCCAAGGCTTGGATGCGTGTGTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp ACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACTTCATAATCCAGTTGTTCTCATaGAGCCGTGTGCGGTACGTG +
Preference number: 4 (lower is better)
Translates to: TDHVLSKSNCSSFSTDFIIQLFS*SRVRYV
Trigger: CACGTACCGCACACGGCTGCATGAGAACAACTGGAT...TATGAAGTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR GCA 90 bp GCCCTCTTCCCTGATACCACCATCCACATAGTAAAGATGGCATGGAATCTCTCCCTGAAGAGAAAGGAATaGTTAACCACTAAGACTCAG +
Preference number: 4 (lower is better)
Translates to: ALFPDTTIHIVKMAWNLSLKRKE*LTTKTQ
Trigger: CTGAGTCTTAGTGGTTAAGCATTCCTTTCTCTTCAG...GGAGAGATTCCATGCCATCTTTACTATGTGGATGGTGGTATCAGGGAAGAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp ACAGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGGAATGCAGCTTGTACTaGACGTTGATGCCACTGAAT +
Preference number: 4 (lower is better)
Translates to: TAPQTMFFQKATAPALALECSLY*TLMPLN
Trigger: ATTCAGTGGCATCAACGTCCAGTACAAGCTGCATTC...CAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCAATTTGATGACATGTaGGTGGTTGACCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSQFDDM*VVDLLQ
Trigger: CTGAAGCAGGTCAACCACCCACATGTCATCAAATTG...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp GAGTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGATGCCATCCATTTAACTaGAATCCGACCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: EFWQEPYLLSIVRPQHHRCHPFN*NPTLAP
Trigger: AGGAGCCAGGGTCGGATTCCAGTTAAATGGATGGCA...TCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CCA 90 bp ATAGTAAAGATGGCATGGAATCTCTCCATTGTGCTAAATCTAGGAATCATCTTAGGCCTCTCCATCCGGTaGCCGGTCTTCAGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: IVKMAWNLSIVLNLGIILGLSIR*PVFRRL
Trigger: CAACCTTCTGAAGACCGGCCACCGGATGGAGAGGCC...TAAGATGATTCCTAGATTTAGCACAATGGAGAGATTCCATGCCATCTTTACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp GAGTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGAGCTGAGTGGTGCTGGTaGCTCCTTTCTCAACTGAAT +
Preference number: 4 (lower is better)
Translates to: EFWQEPYLLSIVRPQHHRAEWCW*LLSQLN
Trigger: ATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGC...TCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR TCA 90 bp ACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACTTCATATGGAGAAGTTCCTGGTaGTCCCTTTGCCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: TDHVLSKSNCSSFSTDFIWRSSW*SLCHLL
Trigger: AAGGAGATGGCAAAGGGATCACCAGGAACTTCTCCA...TATGAAGTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp ATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCATGTTCTTTCAAAAAGAAGGTCATCTCAGCTaGGGAGATGGGTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: IFTVHCKTTAPQTMFFQKEGHLS*GDGWLV
Trigger: CACAAGCCACCCATCTCCTCAGCTGAGATGACCTTC...TTTTTGAAAGAACATGGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR TCA 90 bp TTCTGCATTTACGTGTATGAAAATTCCAGTAGAGCTAATAAGGATGGGGACTTTACGGCTCGGCCAATGTaGCGTTCACAAAGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: FCIYVYENSSRANKDGDFTARPM*RSQRKG
Trigger: GCCCTTTCTTTGTGAACGTCACATTGGCCGAGCCGT...AAAGTCCCCATCCTTATTAGCTCTACTGGAATTTTCATACACGTAAATGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp AGCATTTTTCAAACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATACAAGCAATGAAGAATaGCAAGAAGCTTATGAGTCA +
Preference number: 4 (lower is better)
Translates to: SIFQTLPLGVCAHTTRLYTSNEE*QEAYES
Trigger: TGACTCATAAGCTTCTTGTCATTCTTCATTGCTTGT...ATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTTTGAAAAATGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp TTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGAACACGTGAGGATACCACAAACAAGCAATaGAGAATGACAAGAAGCTTA +
Preference number: 4 (lower is better)
Translates to: FILFSSGVVAAQYRTREDTTNKQ*RMTRSL
Trigger: TAAGCTTCTTGTCATTCTTCATTGCTTGTTTGTGGT...ATCCTCACGTGTTCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp ACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACTTCATACGGTGTCCTCCTGGATaGAGATCCAGTTGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: TDHVLSKSNCSSFSTDFIRCPPG*RSSCSH
Trigger: ATGAGAACAACTGGATCTGCATCCAGGAGGACACCG...TATGAAGTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CCA 90 bp AAATCACCGGCTATCAGAAGTAAAACCACCTTGGAAGTTAAAACAAACTACCAAAGGCCGGTGTCCTCCTaGATGCAGATCCAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: KSPAIRSKTTLEVKTNYQRPVSS*MQIQLF
Trigger: GAACAACTGGATCTGCATCCAGGAGGACACCGGCCT...TTGGTAGTTTGTTTTAACTTCCAAGGTGGTTTTACTTCTGATAGCCGGTGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp ATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCATGTTCTTTCAAAAATTCTCCCAGGAGCTATaGTCCAGGCTCCGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: IFTVHCKTTAPQTMFFQKFSQEL*SRLRLR
Trigger: CCTTAACCGGAGCCTGGACCATAGCTCCTGGGAGAA...TTTTTGAAAGAACATGGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CCA 90 bp CAGTATTTGAATGAGACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCACCGACACGTTGAAGTaGAGCAAGAGGACGCCCGCT +
Preference number: 4 (lower is better)
Translates to: QYLNETILSPISALSLKSTDTLK*SKRTPA
Trigger: AGCGGGCGTCCTCTTGCTCCACTTCAACGTGTCGGT...GCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTCTCATTCAAATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp ATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCATGTTCTTTCAAAAAAGGTCTGCTGGTCGGTaGCCACCACCATGTAGTGAA +
Preference number: 4 (lower is better)
Translates to: IFTVHCKTTAPQTMFFQKRSAGR*PPPCSE
Trigger: TTCACTACATGGTGGTGGCCACCGACCAGCAGACCT...TTTTTGAAAGAACATGGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CCA 90 bp CAGTATTTGAATGAGACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCGCTTTCGCCTCTACTTaGCTGTGGGGTGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QYLNETILSPISALSLKSAFAST*LWGVLQ
Trigger: CTGCAGCACACCCCACAGCCAAGTAGAGGCGAAAGC...GCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTCTCATTCAAATACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp AGACAATTAGGTTATTGGTCAAGGATAAATTGGTCAAGGATAAATTCCCCATCACGGTCTTCAGAAGGTTaGAGAGCCGCTCAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: RQLGYWSRINWSRINSPSRSSEG*RAAQEE
Trigger: TTCCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCG...TGATGGGGAATTTATCCTTGACCAATTTATCCTTGACCAATAACCTAATTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp CAGTATTTGAATGAGACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCTCTCATGCAGCCGTGTaGGGTACGTGCCGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: QYLNETILSPISALSLKSSHAAV*GTCRRD
Trigger: ATCTCTACGGCACGTACCGCACACGGCTGCATGAGA...GCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTCTCATTCAAATACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp ATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCATGTTCTTTCAAAAACACCGTGGTGTACCCTaGTCTGCCTTTCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: IFTVHCKTTAPQTMFFQKHRGVP*SAFQME
Trigger: TTCCATCTGAAAGGCAGAGCAGGGTACACCACGGTG...TTTTTGAAAGAACATGGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR GCA 90 bp AAATCACCGGCTATCAGAAGTAAAACCACCTTGGAAGTTAAAACAAACTACCAAGGTAGGATGAGCCACTaGTTTCGCCTCTACTTGGCT +
Preference number: 4 (lower is better)
Translates to: KSPAIRSKTTLEVKTNYQGRMSH*FRLYLA
Trigger: AGCCAAGTAGAGGCGAAAGCAGTGGCTCATCCTACC...TTGGTAGTTTGTTTTAACTTCCAAGGTGGTTTTACTTCTGATAGCCGGTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp TCTGCATTTACGTGTATGAAAATTCCAGTAGAGCTAATAAGGATGGGGACTTTTGAGGGAGCTGCAGGCTaGAAAGGAGGTGTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: SAFTCMKIPVELIRMGTFEGAAG*KGGVEE
Trigger: TTCTTCAACACCTCCTTTCCAGCCTGCAGCTCCCTC...AAAAGTCCCCATCCTTATTAGCTCTACTGGAATTTTCATACACGTAAATGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AAGTACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGGTTCAGAGCAGACTTTaGTTTTGTTCAGACCAGAAA +
Preference number: 4 (lower is better)
Translates to: KYYDLIPTPEAPYSTCSWVQSRL*FCSDQK
Trigger: TTTCTGGTCTGAACAAAACCAAAGTCTGCTCTGAAC...CCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR TCA 90 bp AAATCACCGGCTATCAGAAGTAAAACCACCTTGGAAGTTAAAACAAACTACCAAGAGTTCTTACCCTCCTaGGAACAAACCTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: KSPAIRSKTTLEVKTNYQEFLPS*EQTCCS
Trigger: GCTGCAACAGGTTTGTTCTCAGGAGGGTAAGAACTC...TTGGTAGTTTGTTTTAACTTCCAAGGTGGTTTTACTTCTGATAGCCGGTGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AAACAAGCAATGAAGAATGACAAGAAGCTTATGAGTCATGGTCAGAATCTAAGATGCTGTCAGCAATTCTaGGACTCCAACAGCCCCCTT +
Preference number: 4 (lower is better)
Translates to: KQAMKNDKKLMSHGQNLRCCQQF*DSNSPL
Trigger: AAGGGGGCTGTTGGAGTCCCAGAATTGCTGACAGCA...TCTTAGATTCTGACCATGACTCATAAGCTTCTTGTCATTCTTCATTGCTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR TCA 90 bp AGACAATTAGGTTATTGGTCAAGGATAAATTGGTCAAGGATAAATTCCCCATCATGGAGAAGTTCCTGGTaGTCCCTTTGCCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: RQLGYWSRINWSRINSPSWRSSW*SLCHLL
Trigger: AAGGAGATGGCAAAGGGATCACCAGGAACTTCTCCA...TGATGGGGAATTTATCCTTGACCAATTTATCCTTGACCAATAACCTAATTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp AAATCACCGGCTATCAGAAGTAAAACCACCTTGGAAGTTAAAACAAACTACCAAACTGGAGGAGTGTTGTaGATCTGTGACCACAAACAA +
Preference number: 4 (lower is better)
Translates to: KSPAIRSKTTLEVKTNYQTGGVL*ICDHKQ
Trigger: TTGTTTGTGGTCACAGATGCACAACACTCCTCCAGT...TTGGTAGTTTGTTTTAACTTCCAAGGTGGTTTTACTTCTGATAGCCGGTGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR GCA 90 bp GACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCAGGCAGTGTTTTGGTTTAAGTCCTATCAGTaGTTTAAGTCTGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: DYFKSYQCFKSEEQAVFWFKSYQ*FKSEEQ
Trigger: CTGCTCTTCAGACTTAAAGCACTGATAGGACTTAAA...CCAAAACACTGCCTGCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp AAACAAGCAATGAAGAATGACAAGAAGCTTATGAGTCATGGTCAGAATCTAAGAAGGGAATTCCCACTTTaGATCCTCCAGGATCTTGAA +
Preference number: 4 (lower is better)
Translates to: KQAMKNDKKLMSHGQNLRREFPL*ILQDLE
Trigger: TTCAAGATCCTGGAGGATCCAAAGTGGGAATTCCCT...TCTTAGATTCTGACCATGACTCATAAGCTTCTTGTCATTCTTCATTGCTTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp TTCTGCATTTACGTGTATGAAAATTCCAGTAGAGCTAATAAGGATGGGGACTTTGAAGCTTATGAGTCATaGTCAGAATCTAAGAAACAG +
Preference number: 4 (lower is better)
Translates to: FCIYVYENSSRANKDGDFEAYES*SESKKQ
Trigger: CTGTTTCTTAGATTCTGACCATGACTCATAAGCTTC...AAAGTCCCCATCCTTATTAGCTCTACTGGAATTTTCATACACGTAAATGCAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CCA 90 bp ATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCATGTTCTTTCAAAAATGCCTAAATGTAAACTaGATGCAAAGTCAGACATTT +
Preference number: 4 (lower is better)
Translates to: IFTVHCKTTAPQTMFFQKCLNVN*MQSQTF
Trigger: AAATGTCTGACTTTGCATCCAGTTTACATTTAGGCA...TTTTTGAAAGAACATGGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS GCA 90 bp CCGGCGTGCACGGTGCACACGGCCACCAGCTCGTACTTCTCCCGCTaGTCGCGGTCCAGGGCCCAGCGCGTGCTCACCTCCAGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: PACTVHTATSSYFSR*SRSRAQRVLTSRLS
Trigger: GGACAGCCTGGAGGTGAGCACGCGCTGGGCCCTGGACCGCGAGCAGCGGGAGAAGTACGAGCTGGTGGCCGTGTGCACCGTGCACGCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000683007.1
CDS TCA 90 bp AAGGGCAGACCCTCACCTGCGCACCAAGCAGACAGGGGCCCCGCGTaGTCACCAGCCGGGACCGGGCCAGCCGCTTTCCTCGGGAAGGGG +
Preference number: 5 (lower is better)
Translates to: KGRPSPAHQADRGPA*SPAGTGPAAFLGKG
Trigger: CCCCTTCCCGAGGAAAGCGGCTGGCCCGGTCCCGGCTGGTGATCACGCGGGGCCCCTGTCTGCTTGGTGCGCAGGTGAGGGTCTGCCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683007.1
CDS GCA 90 bp GGAAGGGCACCATCACCACCTCCTCGCGCGCGCCGGCGTGCACGGTaGACACGGCCACCAGCTCGTACTTCTCCCGCTGCTCGCGGTCCA +
Preference number: 5 (lower is better)
Translates to: GRAPSPPPRARRRAR*TRPPARTSPAARGP
Trigger: TGGACCGCGAGCAGCGGGAGAAGTACGAGCTGGTGGCCGTGTGCACCGTGCACGCCGGCGCGCGCGAGGAGGTGGTGATGGTGCCCTTCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000683007.1
CDS GCA 90 bp GTCACCGGGAAGGGCACCATCACCACCTCCTCGCGCGCGCCGGCGTaGACGGTGCACACGGCCACCAGCTCGTACTTCTCCCGCTGCTCG +
Preference number: 5 (lower is better)
Translates to: VTGKGTITTSSRAPA*TVHTATSSYFSRCS
Trigger: CGAGCAGCGGGAGAAGTACGAGCTGGTGGCCGTGTGCACCGTGCACGCCGGCGCGCGCGAGGAGGTGGTGATGGTGCCCTTCCCGGTGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000683007.1
CDS CCA 90 bp CGGTCGCCCGCACGAAGCTGCCGTTGGCCTGGACCGAGGTCTCGTTaGGCCAGTGTTCCACCCGGAAGGTCTGCTGGGCCCAGGTGTCCC +
Preference number: 5 (lower is better)
Translates to: RSPARSCRWPGPRSR*ASVPPGRSAGPRCP
Trigger: GGGACACCTGGGCCCAGCAGACCTTCCGGGTGGAACACTGGCCCAACGAGACCTCGGTCCAGGCCAACGGCAGCTTCGTGCGGGCGACCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS GCA 90 bp GCCTGGACCGAGGTCTCGTTGGGCCAGTGTTCCACCCGGAAGGTCTaGTGGGCCCAGGTGTCCCCGGGGAGCAGCGTGCTTGTGTACCGC +
Preference number: 5 (lower is better)
Translates to: AWTEVSLGQCSTRKV*WAQVSPGSSVLVYR
Trigger: GCGGTACACAAGCACGCTGCTCCCCGGGGACACCTGGGCCCAGCAGACCTTCCGGGTGGAACACTGGCCCAACGAGACCTCGGTCCAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS-3UTR CAA 90 bp GGACTGGGGCTGAGGCTTGGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGAGGGGAAAGCCGCGGTaGCGGACACTGAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GLGLRLGQWLLASAGWPLRGKPR*RTLSFS
Trigger: GGAGAAGCTCAGTGTCCGCAACCGCGGCTTTCCCCT...CAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS TCA 90 bp GGGAGCCCAGGCCGCCACACTCCTCACACTCCAGCCGTCTCTTGCTaGCTGCACAGGACAGGGGGCAGCCCGCCTCCTCGGCCACATCTT +
Preference number: 5 (lower is better)
Translates to: GSPGRHTPHTPAVSC*LHRTGGSPPPRPHL
Trigger: AAGATGTGGCCGAGGAGGCGGGCTGCCCCCTGTCCTGTGCAGTCAGCAAGAGACGGCTGGAGTGTGAGGAGTGTGGCGGCCTGGGCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498820.5
CDS GCA 90 bp GCCCAGGCCGCCACACTCCTCACACTCCAGCCGTCTCTTGCTGACTaGACAGGACAGGGGGCAGCCCGCCTCCTCGGCCACATCTTTGCC +
Preference number: 5 (lower is better)
Translates to: AQAATLLTLQPSLAD*TGQGAARLLGHIFA
Trigger: GGCAAAGATGTGGCCGAGGAGGCGGGCTGCCCCCTGTCCTGTGCAGTCAGCAAGAGACGGCTGGAGTGTGAGGAGTGTGGCGGCCTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498820.5
CDS GCA 90 bp CACCGCCAGAGGCTCGGCACCACTGGGTACAGGCTGCGTATGCTCTaGCTCATGGCTCTCCAGCCTGCCGTGTCCGCGCCAGCTGGGAAG +
Preference number: 5 (lower is better)
Translates to: HRQRLGTTGYRLRML*LMALQPAVSAPAGK
Trigger: CTTCCCAGCTGGCGCGGACACGGCAGGCTGGAGAGCCATGAGGCAGAGCATACGCAGCCTGTACCCAGTGGTGCCGAGCCTCTGGCGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CCA 90 bp TGGACCGAGGTCTCGTTGGGCCAGTGTTCCACCCGGAAGGTCTGCTaGGCCCAGGTGTCCCCGGGGAGCAGCGTGCTTGTGTACCGCCTC +
Preference number: 5 (lower is better)
Translates to: WTEVSLGQCSTRKVC*AQVSPGSSVLVYRL
Trigger: GAGGCGGTACACAAGCACGCTGCTCCCCGGGGACACCTGGGCCCAGCAGACCTTCCGGGTGGAACACTGGCCCAACGAGACCTCGGTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS CCA 90 bp CACCGTGCGGCACAGCTCGTCGCACAGTGGATCTGTGGGTGGGGGTaGTGTGAGGCTTGGCACCGCCAGAGGCTCGGCACCACTGGGTAC +
Preference number: 5 (lower is better)
Translates to: HRAAQLVAQWICGWG*CEAWHRQRLGTTGY
Trigger: GTACCCAGTGGTGCCGAGCCTCTGGCGGTGCCAAGCCTCACACCACCCCCACCCACAGATCCACTGTGCGACGAGCTGTGCCGCACGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CCA 90 bp GAGGACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTaGATCTGTGGGTGGGGGTGGTGTGAGGCTTGGCACCGCCAGAGG +
Preference number: 5 (lower is better)
Translates to: EDSGCDHRAAQLVAQ*ICGWGWCEAWHRQR
Trigger: CCTCTGGCGGTGCCAAGCCTCACACCACCCCCACCCACAGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS-3UTR CAA 90 bp GGACTGGGGCTGAGGCTTGGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGCGCAGGGAGCCGTATTaGGCGTACTCCACGATGAGG +
Preference number: 5 (lower is better)
Translates to: GLGLRLGQWLLASAGWPLRREPY*AYSTMR
Trigger: CCTCATCGTGGAGTACGCCAAATACGGCTCCCTGCG...CAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CAA 90 bp TGCCCAGGTAGCCAGGCCCCACTTTGCGGCTCTCGCGGAGGAAGCCCCGCAGGGCGCAGGGAGCCGTATTaGGCGTACTCCACGATGAGG +
Preference number: 5 (lower is better)
Translates to: CPGSQAPLCGSRGGSPAGRREPY*AYSTMR
Trigger: CCTCATCGTGGAGTACGCCAAATACGGCTCCCTGCG...CCCTGCGGGGCTTCCTCCGCGAGAGCCGCAAAGTGGGGCCTGGCTACCTGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp GGGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGTCCAGGGAGCTGGAGTaGCGGCTGCCTCCACTGCCC +
Preference number: 5 (lower is better)
Translates to: GPASSCNLATPDGGHVAGSRELE*RLPPLP
Trigger: GGGCAGTGGAGGCAGCCGCAACTCCAGCTCCCTGGA...CCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS CCA 90 bp TGGGGCTGGGAGGTGGTGGTGGTCCCGGCCGCCACCCACTCACCCTaGATGTCTTCGGGCTCGCAGAAGCACTTCTCCTCCTCAGGGAAG +
Preference number: 5 (lower is better)
Translates to: WGWEVVVVPAATHSP*MSSGSQKHFSSSGK
Trigger: CTTCCCTGAGGAGGAGAAGTGCTTCTGCGAGCCCGAAGACATCCAGGGTGAGTGGGTGGCGGCCGGGACCACCACCACCTCCCAGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS-3UTR CAA 90 bp GACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATTCCAGGGAGCTGGAGTaGCGGCTGCCTCCACTGCCC +
Preference number: 5 (lower is better)
Translates to: DSGCDHRAAQLVAQWILDSRELE*RLPPLP
Trigger: GGGCAGTGGAGGCAGCCGCAACTCCAGCTCCCTGGA...ATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS GCA 90 bp CCTCCTCAGGGGCGTCCCGCAGGGCATGGACGTACAGCAAGGGCGTaGCGGCTGCCTGGTCCACATACAGCTTCTCCCAGTAAGCATCCC +
Preference number: 5 (lower is better)
Translates to: PPQGRPAGHGRTARA*RLPGPHTASPSKHP
Trigger: GGGATGCTTACTGGGAGAAGCTGTATGTGGACCAGGCAGCCGGCACGCCCTTGCTGTACGTCCATGCCCTGCGGGACGCCCCTGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000671844.1
CDS CCA 90 bp AGAGGCTCGGCACCACTGGGTACAGGCTGCGTATGCTCTGCCTCATaGCTCTCCAGCCTGCCGTGTCCGCGCCAGCTGGGAAGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: RGSAPLGTGCVCSAS*LSSLPCPRQLGSGH
Trigger: ATGGCCACTTCCCAGCTGGCGCGGACACGGCAGGCTGGAGAGCCATGAGGCAGAGCATACGCAGCCTGTACCCAGTGGTGCCGAGCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CCA 90 bp CAGCTCGTCGCACAGTGGATCTGTGGGTGGGGGTGGTGTGAGGCTTaGCACCGCCAGAGGCTCGGCACCACTGGGTACAGGCTGCGTATG +
Preference number: 5 (lower is better)
Translates to: QLVAQWICGWGWCEA*HRQRLGTTGYRLRM
Trigger: CATACGCAGCCTGTACCCAGTGGTGCCGAGCCTCTGGCGGTGCCAAGCCTCACACCACCCCCACCCACAGATCCACTGTGCGACGAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS-3UTR CAA 90 bp GGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGAGAGGCACCTGCCTGCCCATGACATGTGGGTGGTaGACCTGCTTCAGGACGTTG +
Preference number: 5 (lower is better)
Translates to: GQWLLASAGWPLRGTCLPMTCGW*TCFRTL
Trigger: CAACGTCCTGAAGCAGGTCAACCACCCACATGTCAT...GGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS TCA 90 bp GGCACAGCCTGGCCACTGGCACTCGCCCTCACGAAGGGATGTGGGTaGCAGGAAGACCTTGAGGTAGACGGTGAGCAGGGGAAAGCCGCG +
Preference number: 5 (lower is better)
Translates to: GTAWPLALALTKGCG*QEDLEVDGEQGKAA
Trigger: CGCGGCTTTCCCCTGCTCACCGTCTACCTCAAGGTCTTCCTGTCACCCACATCCCTTCGTGAGGGCGAGTGCCAGTGGCCAGGCTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000638465.1
ENST00000671844.1
ENST00000683278.1
ENST00000684216.1
CDS CCA 90 bp GTACTGGGCAGGTGCAGGCTGACCGGCAGCACCGACACGTTGAAGTaGAGCAAGAGGACGCCCGCTCCTGGGCCCTGGAAGTCTGAGTCA +
Preference number: 5 (lower is better)
Translates to: VLGRCRLTGSTDTLK*SKRTPAPGPWKSES
Trigger: TGACTCAGACTTCCAGGGCCCAGGAGCGGGCGTCCTCTTGCTCCACTTCAACGTGTCGGTGCTGCCGGTCAGCCTGCACCTGCCCAGTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS-3UTR CAA 90 bp GGACTGGGGCTGAGGCTTGGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGACCTGCTTCAGGACGTaGAACTCTGACAGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: GLGLRLGQWLLASAGWPLTCFRT*NSDSRS
Trigger: AGACCTGCTGTCAGAGTTCAACGTCCTGAAGCAGGT...CAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCCAAGCCTCAGCCCCAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS TCA 90 bp GGAGCAAGAGGACGCCCGCTCCTGGGCCCTGGAAGTCTGAGTCATTaGCCAGCACCGCCAGCTGCATGGTGCGGTTCTCCGAGATGGAGA +
Preference number: 5 (lower is better)
Translates to: GARGRPLLGPGSLSH*PAPPAAWCGSPRWR
Trigger: TCTCCATCTCGGAGAACCGCACCATGCAGCTGGCGGTGCTGGTCAATGACTCAGACTTCCAGGGCCCAGGAGCGGGCGTCCTCTTGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS GCA 90 bp AGGGGCGTCCCGCAGGGCATGGACGTACAGCAAGGGCGTGCCGGCTaGCTGGTCCACATACAGCTTCTCCCAGTAAGCATCCCTCGAGAA +
Preference number: 5 (lower is better)
Translates to: RGVPQGMDVQQGRAG*LVHIQLLPVSIPRE
Trigger: TTCTCGAGGGATGCTTACTGGGAGAAGCTGTATGTGGACCAGGCAGCCGGCACGCCCTTGCTGTACGTCCATGCCCTGCGGGACGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000671844.1
CDS GCA 90 bp GGCAGACAGCAGCACCGAGACGATGAAGGAGAAGAGGACAGCGGCTaGGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCTGTGGG +
Preference number: 5 (lower is better)
Translates to: GRQQHRDDEGEEDSG*DHRAAQLVAQWICG
Trigger: CCCACAGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCTGCTGTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CCA 90 bp GAACCAGCCTATAGTCATGTACGGTCGCCCGCACGAAGCTGCCGTTaGCCTGGACCGAGGTCTCGTTGGGCCAGTGTTCCACCCGGAAGG +
Preference number: 5 (lower is better)
Translates to: EPAYSHVRSPARSCR*PGPRSRWASVPPGR
Trigger: CCTTCCGGGTGGAACACTGGCCCAACGAGACCTCGGTCCAGGCCAACGGCAGCTTCGTGCGGGCGACCGTACATGACTATAGGCTGGTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS CCA 90 bp ACCGACACGTTGAAGTGGAGCAAGAGGACGCCCGCTCCTGGGCCCTaGAAGTCTGAGTCATTGACCAGCACCGCCAGCTGCATGGTGCGG +
Preference number: 5 (lower is better)
Translates to: TDTLKWSKRTPAPGP*KSESLTSTASCMVR
Trigger: CCGCACCATGCAGCTGGCGGTGCTGGTCAATGACTCAGACTTCCAGGGCCCAGGAGCGGGCGTCCTCTTGCTCCACTTCAACGTGTCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS CCA 90 bp CCAGCCTGCCGTGTCCGCGCCAGCTGGGAAGTGGCCATGGAGGTGTaGGAAGGCCTGAGAACACCCCATCGAGCATGGGTACTGCCATTT +
Preference number: 5 (lower is better)
Translates to: PACRVRASWEVAMEV*EGLRTPHRAWVLPF
Trigger: AAATGGCAGTACCCATGCTCGATGGGGTGTTCTCAGGCCTTCCCACACCTCCATGGCCACTTCCCAGCTGGCGCGGACACGGCAGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS-3UTR CAA 90 bp CCACTGCTTTCGCCTCTACTTGGCTGTGGGGTGTGCTGCAGGCTGGTGGCAGGTGGCCGCCGCAGGGCCTaGGTGTCATTCACAAACAGG +
Preference number: 5 (lower is better)
Translates to: PLLSPLLGCGVCCRLVAGGRRRA*VSFTNR
Trigger: CCTGTTTGTGAATGACACCAAGGCCCTGCGGCGGCC...ACCTGCCACCAGCCTGCAGCACACCCCACAGCCAAGTAGAGGCGAAAGCAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp TGGCCTCTCCATCCGGTGGCCGGTCTTCAGAAGGTTGAAGAGCCGCTCAGGAGGGGCCGCCGCAGGGCCTaGGTGTCATTCACAAACAGG +
Preference number: 5 (lower is better)
Translates to: WPLHPVAGLQKVEEPLRRGRRRA*VSFTNR
Trigger: CCTGTTTGTGAATGACACCAAGGCCCTGCGGCGGCC...CCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCGGCCACCGGATGGAGAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp CTCCACGATGAGGAGGAGCGGGCCATCCTGGCTGCAGGCCCCATACAATTTGATCCGTCGGGGCAGGTCTaGGTGCTGGGAGAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LHDEEERAILAAGPIQFDPSGQV*VLGEQV
Trigger: CACCTGCTCTCCCAGCACCAAGACCTGCCCCGACGG...ATCAAATTGTATGGGGCCTGCAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp GACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATATCTCCTCGCTGCAGTaGTCTGGCCTCTCCATCCGG +
Preference number: 5 (lower is better)
Translates to: DSGCDHRAAQLVAQWILDISSLQ*SGLSIR
Trigger: CCGGATGGAGAGGCCAGACAACTGCAGCGAGGAGAT...ATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp GGCCAGTGGCTGCTCGCCAGTGCCGGGTGGCCTCTGAGAGGCACCTGCCTGCCCTTATTCAACCTGTTCTaGGTCTCCCCTGAGAGTTCC +
Preference number: 5 (lower is better)
Translates to: GQWLLASAGWPLRGTCLPLFNLF*VSPESS
Trigger: GGAACTCTCAGGGGAGACCAAGAACAGGTTGAATAA...GGGCAGGCAGGTGCCTCTCAGAGGCCACCCGGCACTGGCGAGCAGCCACTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS TCA 90 bp GTTGAAGTGGAGCAAGAGGACGCCCGCTCCTGGGCCCTGGAAGTCTaGGTCATTGACCAGCACCGCCAGCTGCATGGTGCGGTTCTCCGA +
Preference number: 5 (lower is better)
Translates to: VEVEQEDARSWALEV*VIDQHRQLHGAVLR
Trigger: TCGGAGAACCGCACCATGCAGCTGGCGGTGCTGGTCAATGACTCAGACTTCCAGGGCCCAGGAGCGGGCGTCCTCTTGCTCCACTTCAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS GCA 90 bp CCTGGATGCAGATCCAGTTGTTCTCATGCAGCCGTGTGCGGTACGTaGCGTAGAGATGCTGGCCCAGGCGGAAGCTGGGCACCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: PGCRSSCSHAAVCGT*RRDAGPGGSWAPPQ
Trigger: CTGAGGAGGTGCCCAGCTTCCGCCTGGGCCAGCATCTCTACGGCACGTACCGCACACGGCTGCATGAGAACAACTGGATCTGCATCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000638465.1
ENST00000640619.1
ENST00000671844.1
ENST00000683278.1
ENST00000684216.1
CDS GCA 90 bp CGGTGTCCTCCTGGATGCAGATCCAGTTGTTCTCATGCAGCCGTGTaGGGTACGTGCCGTAGAGATGCTGGCCCAGGCGGAAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: RCPPGCRSSCSHAAV*GTCRRDAGPGGSWA
Trigger: TGCCCAGCTTCCGCCTGGGCCAGCATCTCTACGGCACGTACCGCACACGGCTGCATGAGAACAACTGGATCTGCATCCAGGAGGACACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000638465.1
ENST00000640619.1
ENST00000671844.1
ENST00000683278.1
ENST00000684216.1
CDS GCA 90 bp CCACTAATCTTCGGTATCTTTCCTAGGCTTCCCAAGGGCACTGCCTaGCCCATGGTGCACCTGGGATCCCTGGGAGCCCCGCCTCATCCC +
Preference number: 5 (lower is better)
Translates to: PLIFGIFPRLPKGTA*PMVHLGSLGAPPHP
Trigger: GGGATGAGGCGGGGCTCCCAGGGATCCCAGGTGCACCATGGGGCAGGCAGTGCCCTTGGGAAGCCTAGGAAAGATACCGAAGATTAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS-3UTR CAA 90 bp ATGAGGTCGCCCATGGTGAGGGCCCGCTCATCCGGGTGGTCCAGGGAGCTGGAGCCAGAGGAATGCAGCTaGTACTGGACGTTGATGCCA +
Preference number: 5 (lower is better)
Translates to: MRSPMVRARSSGWSRELEPEECS*YWTLMP
Trigger: TGGCATCAACGTCCAGTACAAGCTGCATTCCTCTGG...CTCCAGCTCCCTGGACCACCCGGATGAGCGGGCCCTCACCATGGGCGACCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp GCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATGTCTTCGCACTCCAGCCGTCTCTaGCTGACTGCACAGGACAGG +
Preference number: 5 (lower is better)
Translates to: AAITVRHSSSHSGSWMSSHSSRL*LTAQDR
Trigger: CCTGTCCTGTGCAGTCAGCAAGAGACGGCTGGAGTG...CGAAGACATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp AGGGAGCCGTATTTGGCGTACTCCACGATGAGGAGGAGCGGGCCATCCTGGCTGCACTCCAGCCGTCTCTaGCTGACTGCACAGGACAGG +
Preference number: 5 (lower is better)
Translates to: REPYLAYSTMRRSGPSWLHSSRL*LTAQDR
Trigger: CCTGTCCTGTGCAGTCAGCAAGAGACGGCTGGAGTG...CAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAGTACGCCAAATACGGCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS GCA 90 bp TCTCCCAGTAAGCATCCCTCGAGAAGTAGAGGCCCAATGCCACTTTaGCTAGCAGCGGCAGCAGCAGCAGCAACAGCAGACGCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: SPSKHPSRSRGPMPL*LAAAAAAATADAAP
Trigger: CGGGGCTGCGTCTGCTGTTGCTGCTGCTGCTGCCGCTGCTAGGCAAAGTGGCATTGGGCCTCTACTTCTCGAGGGATGCTTACTGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000671844.1
CDS GCA 90 bp GCTCCTGGGCCCTGGAAGTCTGAGTCATTGACCAGCACCGCCAGCTaGATGGTGCGGTTCTCCGAGATGGAGAGGTTCCGGTTGAGAACC +
Preference number: 5 (lower is better)
Translates to: APGPWKSESLTSTAS*MVRFSEMERFRLRT
Trigger: GGTTCTCAACCGGAACCTCTCCATCTCGGAGAACCGCACCATGCAGCTGGCGGTGCTGGTCAATGACTCAGACTTCCAGGGCCCAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS GCA 90 bp CAGGAAGACCTTGAGGTAGACGGTGAGCAGGGGAAAGCCGCGGTCTaGAGAGAGAAGTCAGGTCTGTGGGGGCATCGGCCACATTGCGGA +
Preference number: 5 (lower is better)
Translates to: QEDLEVDGEQGKAAV*REKSGLWGHRPHCG
Trigger: TCCGCAATGTGGCCGATGCCCCCACAGACCTGACTTCTCTCTGCAGACCGCGGCTTTCCCCTGCTCACCGTCTACCTCAAGGTCTTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS GCA 90 bp AGAAGAGGACTGTTAGTTCCGCAGCATGAGGTGGCCTCTGAAAAGTaGGGCAAGGGCCTCGGGTCAGTATGCTGCCAGGGAGGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: RRGLLVPQHEVASEK*GKGLGSVCCQGGVP
Trigger: GGGCACCCCTCCCTGGCAGCATACTGACCCGAGGCCCTTGCCGCACTTTTCAGAGGCCACCTCATGCTGCGGAACTAACAGTCCTCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CCA 90 bp CCACCATGTAGTGAAGTTCGGCACACTTGGGCCGCCGCAGGGCCTTaGTGTCATTCACAAACAGGATCCCCGAGGTGTCCTCGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: PPCSEVRHTWAAAGP*CHSQTGSPRCPRLR
Trigger: CCTCAGCCGAGGACACCTCGGGGATCCTGTTTGTGAATGACACCAAGGCCCTGCGGCGGCCCAAGTGTGCCGAACTTCACTACATGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000671844.1
ENST00000672389.1
ENST00000683007.1
ENST00000683872.1
CDS CCA 90 bp TCTGCTGGTCGGTGGCCACCACCATGTAGTGAAGTTCGGCACACTTaGGCCGCCGCAGGGCCTTGGTGTCATTCACAAACAGGATCCCCG +
Preference number: 5 (lower is better)
Translates to: SAGRWPPPCSEVRHT*AAAGPWCHSQTGSP
Trigger: CGGGGATCCTGTTTGTGAATGACACCAAGGCCCTGCGGCGGCCCAAGTGTGCCGAACTTCACTACATGGTGGTGGCCACCGACCAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000671844.1
ENST00000672389.1
ENST00000683007.1
ENST00000683872.1
CDS-3UTR CAA 90 bp CCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCAAGCTGGACCGAGGTCTCGTaGGGCCAGTGTTCCACCCGG +
Preference number: 5 (lower is better)
Translates to: PSGCVRTHHKALLHTHPSWTEVS*GQCSTR
Trigger: CCGGGTGGAACACTGGCCCAACGAGACCTCGGTCCA...GCTTGGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp ACAGCAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGGGCCGCCGCAGGGCCTaGGTGTCATTCACAAACAGG +
Preference number: 5 (lower is better)
Translates to: TAGLAAHSGRRSLSASSRGRRRA*VSFTNR
Trigger: CCTGTTTGTGAATGACACCAAGGCCCTGCGGCGGCC...CCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp GGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGACTCCTGCTTCCAGCATaGCAGCATCAGGCGGTACAT +
Preference number: 5 (lower is better)
Translates to: GQPAPATSLPLMEDMWLGLLLPA*QHQAVH
Trigger: ATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAG...TCCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS GCA 90 bp GCCACTGAATGCCTGGCAGTTTTCCACACAGACTTTCCCGATCTTTaGCTAGCAGCGGCAGCAGCAGCAGCAACAGCAGACGCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: ATECLAVFHTDFPDL*LAAAAAAATADAAP
Trigger: CGGGGCTGCGTCTGCTGTTGCTGCTGCTGCTGCCGCTGCTAGGCAAAGATCGGGAAAGTCTGTGTGGAAAACTGCCAGGCATTCAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672389.1
CDS CCA 90 bp ATGGTGCACCTGGGATCCCTGGGAGCCCCGCCTCATCCCCGGGACTaGGCACCTGGCTCCTCTTCACGTAGGAATCCTCTTCATAAACAT +
Preference number: 5 (lower is better)
Translates to: MVHLGSLGAPPHPRD*APGSSSRRNPLHKH
Trigger: ATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGCCAGGTGCCCAGTCCCGGGGATGAGGCGGGGCTCCCAGGGATCCCAGGTGCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS-3UTR CAA 90 bp GGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGATGGATGCAGATCCAGTaGTTCTCATGCAGCCGTGTG +
Preference number: 5 (lower is better)
Translates to: GQPAPATSLPLMEDMWLGWMQIQ*FSCSRV
Trigger: CACACGGCTGCATGAGAACAACTGGATCTGCATCCA...TCCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CAA 90 bp CTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCGTGTCCTCCTTCCGCTaGAACTCCACCACGGCGCTG +
Preference number: 5 (lower is better)
Translates to: LSLWVCAHTPQGSITHASVSSFR*NSTTAL
Trigger: CAGCGCCGTGGTGGAGTTCAAGCGGAAGGAGGACAC...GGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp TCTGGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCCGCACGAAGCTGCCGTaGGCCTGGACCGAGGTCTCG +
Preference number: 5 (lower is better)
Translates to: SGTPTAPFLHTVLIRGSGRTKLP*AWTEVS
Trigger: CGAGACCTCGGTCCAGGCCAACGGCAGCTTCGTGCG...GCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp CTGCTGGTCGGTGGCCACCACCATGTAGTGAAGTTCGGCACACTTGGGCCGCCGCCAGAGGAATGCAGCTaGTACTGGACGTTGATGCCA +
Preference number: 5 (lower is better)
Translates to: LLVGGHHHVVKFGTLGPPPEECS*YWTLMP
Trigger: TGGCATCAACGTCCAGTACAAGCTGCATTCCTCTGG...CGGCGGCCCAAGTGTGCCGAACTTCACTACATGGTGGTGGCCACCGACCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp AACTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCGTCGGGGCAGGTCTaGGTGCTGGGAGAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: NSPSGCVRTHHKALLHTHPSGQV*VLGEQV
Trigger: CACCTGCTCTCCCAGCACCAAGACCTGCCCCGACGG...ATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp CTGCTGGTCGGTGGCCACCACCATGTAGTGAAGTTCGGCACACTTGGGCCGCCGACCTGCTTCAGGACGTaGAACTCTGACAGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: LLVGGHHHVVKFGTLGPPTCFRT*NSDSRS
Trigger: AGACCTGCTGTCAGAGTTCAACGTCCTGAAGCAGGT...CGGCGGCCCAAGTGTGCCGAACTTCACTACATGGTGGTGGCCACCGACCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp AGGGAGCCGTATTTGGCGTACTCCACGATGAGGAGGAGCGGGCCATCCTGGCTGCTCCTGCTTCCAGCATaGCAGCATCAGGCGGTACAT +
Preference number: 5 (lower is better)
Translates to: REPYLAYSTMRRSGPSWLLLLPA*QHQAVH
Trigger: ATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAG...CAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAGTACGCCAAATACGGCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp GGCTGGAAAGGAGGTGTTGAAGAAGGAGAAGTATACGCGGGCACAGCCTGGCCAGGGGCATCGGCCACATaGCGGACACTGAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GWKGGVEEGEVYAGTAWPGASAT*RTLSFS
Trigger: GGAGAAGCTCAGTGTCCGCAATGTGGCCGATGCCCC...TGGCCAGGCTGTGCCCGCGTATACTTCTCCTTCTTCAACACCTCCTTTCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS TCA 90 bp TGGTGTCATTCACAAACAGGATCCCCGAGGTGTCCTCGGCTGAGGTaGCCACCCCTAGCGTGCTGCAGTTGGCACCAGAGGAATGCAGCT +
Preference number: 5 (lower is better)
Translates to: WCHSQTGSPRCPRLR*PPLACCSWHQRNAA
Trigger: AGCTGCATTCCTCTGGTGCCAACTGCAGCACGCTAGGGGTGGTCACCTCAGCCGAGGACACCTCGGGGATCCTGTTTGTGAATGACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000671844.1
ENST00000672389.1
ENST00000683007.1
ENST00000683872.1
CDS CCA 90 bp GAGGTGTTGAAGAAGGAGAAGTATACGCGGGCACAGCCTGGCCACTaGCACTCGCCCTCACGAAGGGATGTGGGTGACAGGAAGACCTTG +
Preference number: 5 (lower is better)
Translates to: EVLKKEKYTRAQPGH*HSPSRRDVGDRKTL
Trigger: CAAGGTCTTCCTGTCACCCACATCCCTTCGTGAGGGCGAGTGCCAGTGGCCAGGCTGTGCCCGCGTATACTTCTCCTTCTTCAACACCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000638465.1
ENST00000671844.1
ENST00000683278.1
ENST00000684216.1
CDS-3UTR CAA 90 bp TGGGGGTCGGTTCTCCCGAATGCGGAAGGAGGGCCTTGTCTCTGGGAAGCAGAGTGGATGCAGATCCAGTaGTTCTCATGCAGCCGTGTG +
Preference number: 5 (lower is better)
Translates to: WGSVLPNAEGGPCLWEAEWMQIQ*FSCSRV
Trigger: CACACGGCTGCATGAGAACAACTGGATCTGCATCCA...CTCTGCTTCCCAGAGACAAGGCCCTCCTTCCGCATTCGGGAGAACCGACCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS-3UTR CAA 90 bp CTCTCCCTCTGGGTGTGTGCGCACACACCACAAGGCTCTATTACACACGCATCCCGCAGGGAGCCGTATTaGGCGTACTCCACGATGAGG +
Preference number: 5 (lower is better)
Translates to: LSLWVCAHTPQGSITHASRREPY*AYSTMR
Trigger: CCTCATCGTGGAGTACGCCAAATACGGCTCCCTGCG...GGATGCGTGTGTAATAGAGCCTTGTGGTGTGTGCGCACACACCCAGAGGGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp CTTCTCCTCCTCAGGGAAGCAGTTGCAGGTGCCATAGCCAGCTTTAATCCCCCGCGCAGGGAGCCGTATTaGGCGTACTCCACGATGAGG +
Preference number: 5 (lower is better)
Translates to: LLLLREAVAGAIASFNPPRREPY*AYSTMR
Trigger: CCTCATCGTGGAGTACGCCAAATACGGCTCCCTGCG...CGGGGGATTAAAGCTGGCTATGGCACCTGCAACTGCTTCCCTGAGGAGGAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCATCTCCTCGCTGCAGTaGTCTGGCCTCTCCATCCGG +
Preference number: 5 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTISSLQ*SGLSIR
Trigger: CCGGATGGAGAGGCCAGACAACTGCAGCGAGGAGAT...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CAA 90 bp TGGTGGAAGGTGCCTGGGGGTCGGTTCTCCCGAATGCGGAAGGAGGGCCTTGTCAATAAACCAGATGGCTaGTGTCAAGGGCTCGCAGAG +
Preference number: 5 (lower is better)
Translates to: WWKVPGGRFSRMRKEGLVNKPDG*CQGLAE
Trigger: CTCTGCGAGCCCTTGACACAAGCCATCTGGTTTATT...GACAAGGCCCTCCTTCCGCATTCGGGAGAACCGACCCCCAGGCACCTTCCACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS CCA 90 bp AAGTTTCATGGGGCCCACTCGCCTCCCAGCAATTTCCTCCCTTGTTaGGACCTCAGATGTGCTGTTGAGACCTCTGTGGGGCTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: KFHGAHSPPSNFLPC*DLRCAVETSVGLGG
Trigger: ACCTCCCAGCCCCACAGAGGTCTCAACAGCACATCTGAGGTCCCAACAAGGGAGGAAATTGCTGGGAGGCGAGTGGGCCCCATGAAACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS-3UTR CAA 90 bp CTTCCCAAAAGCTGCCCCCACAAGACTGGAGGAGTGTTGTGCATCTGTGACCACCCTAGCGTGCTGCAGTaGGCACCAGAGGAATGCAGC +
Preference number: 5 (lower is better)
Translates to: LPKSCPHKTGGVLCICDHPSVLQ*APEECS
Trigger: GCTGCATTCCTCTGGTGCCAACTGCAGCACGCTAGG...GTGGTCACAGATGCACAACACTCCTCCAGTCTTGTGGGGGCAGCTTTTGGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp CAGGTCTCGCAGCTCACTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCCACATGACATGTGGGTGGTaGACCTGCTTCAGGACGTTG +
Preference number: 5 (lower is better)
Translates to: QVSQLTRGGVLFQHLHGHMTCGW*TCFRTL
Trigger: CAACGTCCTGAAGCAGGTCAACCACCCACATGTCAT...GTGGCCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAGTGAGCTGCGAGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp AATCCGACCCTGGCTCCTCTTCACGTAGGAATCCTCTTCATAAACATCTCGGGATCCAGGGAGCTGGAGTaGCGGCTGCCTCCACTGCCC +
Preference number: 5 (lower is better)
Translates to: NPTLAPLHVGILFINISGSRELE*RLPPLP
Trigger: GGGCAGTGGAGGCAGCCGCAACTCCAGCTCCCTGGA...TCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGCCAGGGTCGGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp TGGGCCCGGGGGACAAATGTGTCTTGTGAGCCCTCTTCCCTGATACCACCATCCCTCCTGCTTCCAGCATaGCAGCATCAGGCGGTACAT +
Preference number: 5 (lower is better)
Translates to: WARGTNVSCEPSSLIPPSLLLPA*QHQAVH
Trigger: ATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAG...GGATGGTGGTATCAGGGAAGAGGGCTCACAAGACACATTTGTCCCCCGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp GCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATCCTGGATGTCTTCGATCTTCTCCAGGTCTTaGCTGATGTCCGCAAACACC +
Preference number: 5 (lower is better)
Translates to: AAITVRHSSSHSGSWMSSIFSRS*LMSANT
Trigger: GGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGAT...CGAAGACATCCAGGATCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp GAGAAGAGGACAGCGGCTGCGATCACCGTGCGGCACAGCTCGTCGCACAGTGGATTATTCAACCTGTTCTaGGTCTCCCCTGAGAGTTCC +
Preference number: 5 (lower is better)
Translates to: EKRTAAAITVRHSSSHSGLFNLF*VSPESS
Trigger: GGAACTCTCAGGGGAGACCAAGAACAGGTTGAATAA...TCCACTGTGCGACGAGCTGTGCCGCACGGTGATCGCAGCCGCTGTCCTCTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS GCA 90 bp GCTGAGGTGACCACCCCTAGCGTGCTGCAGTTGGCACCAGAGGAATaGAGCTTGTACTGGACGTTGATGCCACTGAATGCCTGGCAGTTT +
Preference number: 5 (lower is better)
Translates to: AEVTTPSVLQLAPEE*SLYWTLMPLNAWQF
Trigger: AAACTGCCAGGCATTCAGTGGCATCAACGTCCAGTACAAGCTGCATTCCTCTGGTGCCAACTGCAGCACGCTAGGGGTGGTCACCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000671844.1
ENST00000672389.1
ENST00000683007.1
ENST00000683872.1
CDS CCA 90 bp GTGGCTGTGCAACCCACCATACCTGCTGACCTTGAAATGTGTTCCTaGGTGGGTCCCAGCTGCATGGTCACAGGGACAGTGACTTGTCAG +
Preference number: 5 (lower is better)
Translates to: VAVQPTIPADLEMCS*VGPSCMVTGTVTCQ
Trigger: CTGACAAGTCACTGTCCCTGTGACCATGCAGCTGGGACCCACCCAGGAACACATTTCAAGGTCAGCAGGTATGGTGGGTTGCACAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS-3UTR CAA 90 bp GCCCTCTTCCCTGATACCACCATCCACATAGTAAAGATGGCATGGAATCTCTCCCGGGGAGCAGCGTGCTaGTGTACCGCCTCACCAGCT +
Preference number: 5 (lower is better)
Translates to: ALFPDTTIHIVKMAWNLSRGAAC*CTASPA
Trigger: AGCTGGTGAGGCGGTACACAAGCACGCTGCTCCCCG...GGAGAGATTCCATGCCATCTTTACTATGTGGATGGTGGTATCAGGGAAGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp AATTCTGGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTTCCAGGGAGCTGGAGTaGCGGCTGCCTCCACTGCCC +
Preference number: 5 (lower is better)
Translates to: NSGTPTAPFLHTVLIRGSSRELE*RLPPLP
Trigger: GGGCAGTGGAGGCAGCCGCAACTCCAGCTCCCTGGA...ACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGAATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp GGCCAGCCAGCTCCTGCAACCTCGCTACCCCTGATGGAGGACATGTGGCTGGGAGGTTCAGAGCAGACTTaGGTTTTGTTCAGACCAGAA +
Preference number: 5 (lower is better)
Translates to: GQPAPATSLPLMEDMWLGGSEQT*VLFRPE
Trigger: TTCTGGTCTGAACAAAACCAAAGTCTGCTCTGAACC...TCCCAGCCACATGTCCTCCATCAGGGGTAGCGAGGTTGCAGGAGCTGGCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS GCA 90 bp GGCACCAGAGGAATGCAGCTTGTACTGGACGTTGATGCCACTGAATaGCTGGCAGTTTTCCACACAGACTTTCCCGATCCTCCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: GTRGMQLVLDVDATE*LAVFHTDFPDPPGA
Trigger: GGCTCCTGGAGGATCGGGAAAGTCTGTGTGGAAAACTGCCAGGCATTCAGTGGCATCAACGTCCAGTACAAGCTGCATTCCTCTGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR CAA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCGCACGAAGCTGCCGTaGGCCTGGACCGAGGTCTCG +
Preference number: 5 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSRTKLP*AWTEVS
Trigger: CGAGACCTCGGTCCAGGCCAACGGCAGCTTCGTGCG...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CAA 90 bp AAGTACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGCCGTCGGGGCAGGTCTaGGTGCTGGGAGAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: KYYDLIPTPEAPYSTCSWPSGQV*VLGEQV
Trigger: CACCTGCTCTCCCAGCACCAAGACCTGCCCCGACGG...CCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CAA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCCGTCGGGGCAGGTCTaGGTGCTGGGAGAGCAGGTG +
Preference number: 5 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSPSGQV*VLGEQV
Trigger: CACCTGCTCTCCCAGCACCAAGACCTGCCCCGACGG...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CAA 90 bp TTGATGTCTTGGGTCTCCACAACATCGCAGTGGCCGTCGGGGCAGGTCTTGGTGTGGAAGGCCGTTGCCTaGACCACTTTTCCAAATTCG +
Preference number: 5 (lower is better)
Translates to: LMSWVSTTSQWPSGQVLVWKAVA*TTFPNS
Trigger: CGAATTTGGAAAAGTGGTCAAGGCAACGGCCTTCCA...CACCAAGACCTGCCCCGACGGCCACTGCGATGTTGTGGAGACCCAAGACATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp CTCCACGATGAGGAGGAGCGGGCCATCCTGGCTGCAGGCCCCATACAATTTGATCAGGCCCCATACAATTaGATGACATGTGGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: LHDEEERAILAAGPIQFDQAPYN*MTCGWL
Trigger: CAACCACCCACATGTCATCAAATTGTATGGGGCCTG...ATCAAATTGTATGGGGCCTGCAGCCAGGATGGCCCGCTCCTCCTCATCGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp TCCCCATCACTGGGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACAATCTCCTCGCTGCAGTaGTCTGGCCTCTCCATCCGG +
Preference number: 5 (lower is better)
Translates to: SPSLGQLFRPGVLTLLRTISSLQ*SGLSIR
Trigger: CCGGATGGAGAGGCCAGACAACTGCAGCGAGGAGAT...TGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACCCAGTGATGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS TCA 90 bp GGTGGGTCCCAGCTGCATGGTCACAGGGACAGTGACTTGTCAGGCTaGCAAGTTGTTTGGTGGAAGAACTGCTTTTCTGGCCTGTCCATC +
Preference number: 5 (lower is better)
Translates to: GGSQLHGHRDSDLSG*QVVWWKNCFSGLSI
Trigger: GATGGACAGGCCAGAAAAGCAGTTCTTCCACCAAACAACTTGTCAGCCTGACAAGTCACTGTCCCTGTGACCATGCAGCTGGGACCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS GCA 90 bp GGAAGGCCTGAGAACACCCCATCGAGCATGGGTACTGCCATTTACTaGCCCCTCCTAGACCACTATTGCCCTCTTACAGATGGAGACAGA +
Preference number: 5 (lower is better)
Translates to: GRPENTPSSMGTAIY*PLLDHYCPLTDGDR
Trigger: TCTGTCTCCATCTGTAAGAGGGCAATAGTGGTCTAGGAGGGGGCAGTAAATGGCAGTACCCATGCTCGATGGGGTGTTCTCAGGCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS-3UTR CAA 90 bp TCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCCCCTGAGAGTTCCTGGATGCAGATCCAGTaGTTCTCATGCAGCCGTGTG +
Preference number: 5 (lower is better)
Translates to: SHPRSALFNLFLVSPESSWMQIQ*FSCSRV
Trigger: CACACGGCTGCATGAGAACAACTGGATCTGCATCCA...GGAACTCTCAGGGGAGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CAA 90 bp AAGTACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTGGACCGAGGTCTCGTaGGGCCAGTGTTCCACCCGG +
Preference number: 5 (lower is better)
Translates to: KYYDLIPTPEAPYSTCSWWTEVS*GQCSTR
Trigger: CCGGGTGGAACACTGGCCCAACGAGACCTCGGTCCA...CCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CAA 90 bp CCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGAACACGTCACTCCAGCCGTCTCTaGCTGACTGCACAGGACAGG +
Preference number: 5 (lower is better)
Translates to: PFFILFSSGVVAAQYRTRHSSRL*LTAQDR
Trigger: CCTGTCCTGTGCAGTCAGCAAGAGACGGCTGGAGTG...ACGTGTTCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp GAACGAGCTTCATCTCGGCCAGATACTGCATCCCCTGTGAGATCTGCCAGGCAAACCTGCTTCAGGACGTaGAACTCTGACAGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: ERASSRPDTASPVRSARQTCFRT*NSDSRS
Trigger: AGACCTGCTGTCAGAGTTCAACGTCCTGAAGCAGGT...TTGCCTGGCAGATCTCACAGGGGATGCAGTATCTGGCCGAGATGAAGCTCGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp TCCCCATCACTGGGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACACCGGTCTTCAGAAGGTaGAAGAGCCGCTCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: SPSLGQLFRPGVLTLLRTPVFRR*KSRSGG
Trigger: TCCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCGG...TGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACCCAGTGATGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp CTCGGGGAGGCGTTCTCTTTCAGCATCTTCACGGCCACCGTGGTGTACCCTGCTGGTTCAGAGCAGACTTaGGTTTTGTTCAGACCAGAA +
Preference number: 5 (lower is better)
Translates to: LGEAFSFSIFTATVVYPAGSEQT*VLFRPE
Trigger: TTCTGGTCTGAACAAAACCAAAGTCTGCTCTGAACC...AGCAGGGTACACCACGGTGGCCGTGAAGATGCTGAAAGAGAACGCCTCCCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR CAA 90 bp TGGGCCCGGGGGACAAATGTGTCTTGTGAGCCCTCTTCCCTGATACCACCATCCTGTGAACACAGAATGTaGGTGGTCACTGATGGACAC +
Preference number: 5 (lower is better)
Translates to: WARGTNVSCEPSSLIPPSCEHRM*VVTDGH
Trigger: GTGTCCATCAGTGACCACCAACATTCTGTGTTCACA...GGATGGTGGTATCAGGGAAGAGGGCTCACAAGACACATTTGTCCCCCGGGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp GAACACAGAATGTTGGTGGTCACTGATGGACACAGACCAACACTGGGTGCTGCTTGCTTTCGCCTCTACTaGGCTGTGGGGTGTGCTGCA +
Preference number: 5 (lower is better)
Translates to: EHRMLVVTDGHRPTLGAACFRLY*AVGCAA
Trigger: TGCAGCACACCCCACAGCCAAGTAGAGGCGAAAGCA...AGCAGCACCCAGTGTTGGTCTGTGTCCATCAGTGACCACCAACATTCTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS GCA 90 bp GGCACCAGAGGAATGCAGCTTGTACTGGACGTTGATGCCACTGAATaGCTGGCAGTTTTCCACACAGACTTTCCCGATCTGGGCAAATCG +
Preference number: 5 (lower is better)
Translates to: GTRGMQLVLDVDATE*LAVFHTDFPDLGKS
Trigger: CGATTTGCCCAGATCGGGAAAGTCTGTGTGGAAAACTGCCAGGCATTCAGTGGCATCAACGTCCAGTACAAGCTGCATTCCTCTGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
ENST00000683872.1
CDS GCA 90 bp GGCACCAGAGGAATGCAGCTTGTACTGGACGTTGATGCCACTGAATaGCTGGCAGTTTTCCACACAGACTTTCCCGATCTCCTTCCGCTT +
Preference number: 5 (lower is better)
Translates to: GTRGMQLVLDVDATE*LAVFHTDFPDLLPL
Trigger: AAGCGGAAGGAGATCGGGAAAGTCTGTGTGGAAAACTGCCAGGCATTCAGTGGCATCAACGTCCAGTACAAGCTGCATTCCTCTGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615310.5
CDS CCA 90 bp CCAGAGGAATGCAGCTTGTACTGGACGTTGATGCCACTGAATGCCTaGCAGTTTTCCACACAGACTTTCCCGATCTGGGCAAATCGGCGA +
Preference number: 5 (lower is better)
Translates to: PEECSLYWTLMPLNA*QFSTQTFPIWANRR
Trigger: TCGCCGATTTGCCCAGATCGGGAAAGTCTGTGTGGAAAACTGCCAGGCATTCAGTGGCATCAACGTCCAGTACAAGCTGCATTCCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
ENST00000683872.1
CDS CCA 90 bp CCAGAGGAATGCAGCTTGTACTGGACGTTGATGCCACTGAATGCCTaGCAGTTTTCCACACAGACTTTCCCGATCCTCCAGGAGCCTGTA +
Preference number: 5 (lower is better)
Translates to: PEECSLYWTLMPLNA*QFSTQTFPILQEPV
Trigger: TACAGGCTCCTGGAGGATCGGGAAAGTCTGTGTGGAAAACTGCCAGGCATTCAGTGGCATCAACGTCCAGTACAAGCTGCATTCCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS-3UTR CAA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTGTGTCCTCCTTCCGCTaGAACTCCACCACGGCGCTG +
Preference number: 5 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSVSSFR*NSTTAL
Trigger: CAGCGCCGTGGTGGAGTTCAAGCGGAAGGAGGACAC...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CAA 90 bp AAGGGATTCAATTGCCATCCATTTAACTGGAATCCGACCCTGGCTCCTCTTCACCCTAGCGTGCTGCAGTaGGCACCAGAGGAATGCAGC +
Preference number: 5 (lower is better)
Translates to: KGFNCHPFNWNPTLAPLHPSVLQ*APEECS
Trigger: GCTGCATTCCTCTGGTGCCAACTGCAGCACGCTAGG...GTGAAGAGGAGCCAGGGTCGGATTCCAGTTAAATGGATGGCAATTGAATCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp GTCTCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACACCCTAGCGTGCTGCAGTaGGCACCAGAGGAATGCAGC +
Preference number: 5 (lower is better)
Translates to: VSPLNHHLLQVFADVRKHPSVLQ*APEECS
Trigger: GCTGCATTCCTCTGGTGCCAACTGCAGCACGCTAGG...GTGTTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp GCAGAAGGCAGACAGCAGCACCGAGACGATGAAGGAGAAGAGGACAGCGGCTGCAGACCATACATCACTTaGCGTGGTGTAGATATGATC +
Preference number: 5 (lower is better)
Translates to: AEGRQQHRDDEGEEDSGCRPYIT*RGVDMI
Trigger: GATCATATCTACACCACGCAAAGTGATGTATGGTCT...GCAGCCGCTGTCCTCTTCTCCTTCATCGTCTCGGTGCTGCTGTCTGCCTTCTGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS GCA 90 bp GGCACCAGAGGAATGCAGCTTGTACTGGACGTTGATGCCACTGAATaGCTGGCAGTTTTCCACACAGACTTTCCCGATCTTTGCCTAGCA +
Preference number: 5 (lower is better)
Translates to: GTRGMQLVLDVDATE*LAVFHTDFPDLCLA
Trigger: TGCTAGGCAAAGATCGGGAAAGTCTGTGTGGAAAACTGCCAGGCATTCAGTGGCATCAACGTCCAGTACAAGCTGCATTCCTCTGGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672389.1
CDS CCA 90 bp CCAGAGGAATGCAGCTTGTACTGGACGTTGATGCCACTGAATGCCTaGCAGTTTTCCACACAGACTTTCCCGATCTCCTTCCGCTTGAAC +
Preference number: 5 (lower is better)
Translates to: PEECSLYWTLMPLNA*QFSTQTFPISFRLN
Trigger: GTTCAAGCGGAAGGAGATCGGGAAAGTCTGTGTGGAAAACTGCCAGGCATTCAGTGGCATCAACGTCCAGTACAAGCTGCATTCCTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615310.5
CDS-3UTR CAA 90 bp GTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCGGCCGCCGCAGGGCCTaGGTGTCATTCACAAACAGG +
Preference number: 5 (lower is better)
Translates to: VLARTIFTVHCKTTAPQTGRRRA*VSFTNR
Trigger: CCTGTTTGTGAATGACACCAAGGCCCTGCGGCGGCC...GGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CAA 90 bp GAACGAGCTTCATCTCGGCCAGATACTGCATCCCCTGTGAGATCTGCCAGGCAAGCAAATGTTGATGTCTaGGGTCTCCACAACATCGCA +
Preference number: 5 (lower is better)
Translates to: ERASSRPDTASPVRSARQANVDV*GLHNIA
Trigger: TGCGATGTTGTGGAGACCCAAGACATCAACATTTGC...TTGCCTGGCAGATCTCACAGGGGATGCAGTATCTGGCCGAGATGAAGCTCGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp CAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCTGCTCAGTACCGATGGAAGGCCGTTGCCTaGACCACTTTTCCAAATTCG +
Preference number: 5 (lower is better)
Translates to: QPPFFILFSSGVVAAQYRWKAVA*TTFPNS
Trigger: CGAATTTGGAAAAGTGGTCAAGGCAACGGCCTTCCA...TCGGTACTGAGCAGCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp GCTCCTCTTCACGTAGGAATCCTCTTCATAAACATCTCGGGACAAGCCGAAATCCCGGTCTTCAGAAGGTaGAAGAGCCGCTCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: APLHVGILFINISGQAEIPVFRR*KSRSGG
Trigger: TCCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCGG...GATTTCGGCTTGTCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp ACGAGCTTCATCTCGGCCAGATACTGCATCCCCTGTGAGATCTGCCAGGCAAATATCTTCTCCAGGTCTTaGCTGATGTCCGCAAACACC +
Preference number: 5 (lower is better)
Translates to: TSFISARYCIPCEICQANIFSRS*LMSANT
Trigger: GGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGAT...ATTTGCCTGGCAGATCTCACAGGGGATGCAGTATCTGGCCGAGATGAAGCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp TGTGGGTGGTTGACCTGCTTCAGGACGTTGAACTCTGACAGCAGGTCTCGCAGCCTCTACCATCCTAAGTaGCTGGGCAATGTGGTAATT +
Preference number: 5 (lower is better)
Translates to: CGWLTCFRTLNSDSRSRSLYHPK*LGNVVI
Trigger: AATTACCACATTGCCCAGCAACTTAGGATGGTAGAG...GCTGCGAGACCTGCTGTCAGAGTTCAACGTCCTGAAGCAGGTCAACCACCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS TCA 90 bp AAATGTGTTCCTGGGTGGGTCCCAGCTGCATGGTCACAGGGACAGTaGCTTGTCAGGCTGACAAGTTGTTTGGTGGAAGAACTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: KCVPGWVPAAWSQGQ*LVRLTSCLVEELLF
Trigger: GAAAAGCAGTTCTTCCACCAAACAACTTGTCAGCCTGACAAGTCACTGTCCCTGTGACCATGCAGCTGGGACCCACCCAGGAACACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS-3UTR CAA 90 bp ACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACTTCATACGGGGAGCAGCGTGCTaGTGTACCGCCTCACCAGCT +
Preference number: 5 (lower is better)
Translates to: TDHVLSKSNCSSFSTDFIRGAAC*CTASPA
Trigger: AGCTGGTGAGGCGGTACACAAGCACGCTGCTCCCCG...TATGAAGTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CAA 90 bp GCCCTCTTCCCTGATACCACCATCCACATAGTAAAGATGGCATGGAATCTCTCCCCAGAGGAATGCAGCTaGTACTGGACGTTGATGCCA +
Preference number: 5 (lower is better)
Translates to: ALFPDTTIHIVKMAWNLSPEECS*YWTLMP
Trigger: TGGCATCAACGTCCAGTACAAGCTGCATTCCTCTGG...GGAGAGATTCCATGCCATCTTTACTATGTGGATGGTGGTATCAGGGAAGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp GTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCCCTAGCGTGCTGCAGTaGGCACCAGAGGAATGCAGC +
Preference number: 5 (lower is better)
Translates to: VLARTIFTVHCKTTAPQTPSVLQ*APEECS
Trigger: GCTGCATTCCTCTGGTGCCAACTGCAGCACGCTAGG...GGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CAA 90 bp GTGCTCCCAGTGCAGGCTGAGTGGTGCTGGTGGCTCCTTTCTCAACTGAATACCAGACCATACATCACTTaGCGTGGTGTAGATATGATC +
Preference number: 5 (lower is better)
Translates to: VLPVQAEWCWWLLSQLNTRPYIT*RGVDMI
Trigger: GATCATATCTACACCACGCAAAGTGATGTATGGTCT...GGTATTCAGTTGAGAAAGGAGCCACCAGCACCACTCAGCCTGCACTGGGAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CAA 90 bp AAGTACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGCCGGTCTTCAGAAGGTaGAAGAGCCGCTCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: KYYDLIPTPEAPYSTCSWPVFRR*KSRSGG
Trigger: TCCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCGG...CCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CAA 90 bp AGAGTTTTTCCAAGAACCAAGTTCTTCCGAGGGAATTCCCACTTTGGATCCTCCCCGGTCTTCAGAAGGTaGAAGAGCCGCTCAGGAGGA +
Preference number: 5 (lower is better)
Translates to: RVFPRTKFFRGNSHFGSSPVFRR*KSRSGG
Trigger: TCCTCCTGAGCGGCTCTTCAACCTTCTGAAGACCGG...GGAGGATCCAAAGTGGGAATTCCCTCGGAAGAACTTGGTTCTTGGAAAAACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp GCTCCTCTTCACGTAGGAATCCTCTTCATAAACATCTCGGGACAAGCCGAAATCCTCCTGCTTCCAGCATaGCAGCATCAGGCGGTACAT +
Preference number: 5 (lower is better)
Translates to: APLHVGILFINISGQAEILLLPA*QHQAVH
Trigger: ATGTACCGCCTGATGCTGCAATGCTGGAAGCAGGAG...GATTTCGGCTTGTCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS GCA 90 bp GGGCTATATAATACCAGAAAACTCAATGACAGAAACGTGTCCCTATaGTCAGGCAGAACAGCACCCCTGAGTGTAGTCAGTGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: GLYNTRKLNDRNVSL*SGRTAPLSVVSVAV
Trigger: CACAGCCACACTGACTACACTCAGGGGTGCTGTTCTGCCTGAGCATAGGGACACGTTTCTGTCATTGAGTTTTCTGGTATTATATAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS-3UTR CAA 90 bp ACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACTTCATACACTCCAGCCGTCTCTaGCTGACTGCACAGGACAGG +
Preference number: 5 (lower is better)
Translates to: TDHVLSKSNCSSFSTDFIHSSRL*LTAQDR
Trigger: CCTGTCCTGTGCAGTCAGCAAGAGACGGCTGGAGTG...TATGAAGTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CAA 90 bp GCTCCTCTTCACGTAGGAATCCTCTTCATAAACATCTCGGGACAAGCCGAAATCTGGAAGGCCGTTGCCTaGACCACTTTTCCAAATTCG +
Preference number: 5 (lower is better)
Translates to: APLHVGILFINISGQAEIWKAVA*TTFPNS
Trigger: CGAATTTGGAAAAGTGGTCAAGGCAACGGCCTTCCA...GATTTCGGCTTGTCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp AGCACCACAGACCATGTTCTTTCAAAAAGCAACTGCTCCAGCTTTAGCACTGACATGACATGTGGGTGGTaGACCTGCTTCAGGACGTTG +
Preference number: 5 (lower is better)
Translates to: STTDHVLSKSNCSSFSTDMTCGW*TCFRTL
Trigger: CAACGTCCTGAAGCAGGTCAACCACCCACATGTCAT...GTCAGTGCTAAAGCTGGAGCAGTTGCTTTTTGAAAGAACATGGTCTGTGGTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CAA 90 bp AAGGGATTCAATTGCCATCCATTTAACTGGAATCCGACCCTGGCTCCTCTTCACGCAAATGTTGATGTCTaGGGTCTCCACAACATCGCA +
Preference number: 5 (lower is better)
Translates to: KGFNCHPFNWNPTLAPLHANVDV*GLHNIA
Trigger: TGCGATGTTGTGGAGACCCAAGACATCAACATTTGC...GTGAAGAGGAGCCAGGGTCGGATTCCAGTTAAATGGATGGCAATTGAATCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp AAGTACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTGGAAGGCCGTTGCCTaGACCACTTTTCCAAATTCG +
Preference number: 5 (lower is better)
Translates to: KYYDLIPTPEAPYSTCSWWKAVA*TTFPNS
Trigger: CGAATTTGGAAAAGTGGTCAAGGCAACGGCCTTCCA...CCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CAA 90 bp TACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGTCTCAGGCCCCATACAATTaGATGACATGTGGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: YYDLIPTPEAPYSTCSWSQAPYN*MTCGWL
Trigger: CAACCACCCACATGTCATCAAATTGTATGGGGCCTG...AGACCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CAA 90 bp GTAGTCTCTCCTCTTAACCATCATCTTCTCCAGGTCTTTGCTGATGTCCGCAAACAGGCCCCATACAATTaGATGACATGTGGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: VVSPLNHHLLQVFADVRKQAPYN*MTCGWL
Trigger: CAACCACCCACATGTCATCAAATTGTATGGGGCCTG...TTTGCGGACATCAGCAAAGACCTGGAGAAGATGATGGTTAAGAGGAGAGACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp ATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCATGTTCTTTCAAAAAGGCAGCACCGACACGTaGAAGTGGAGCAAGAGGACG +
Preference number: 5 (lower is better)
Translates to: IFTVHCKTTAPQTMFFQKGSTDT*KWSKRT
Trigger: CGTCCTCTTGCTCCACTTCAACGTGTCGGTGCTGCC...TTTTTGAAAGAACATGGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CAA 90 bp GAGTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCAGAGGAATGCAGCTaGTACTGGACGTTGATGCCA +
Preference number: 5 (lower is better)
Translates to: EFWQEPYLLSIVRPQHHRPEECS*YWTLMP
Trigger: TGGCATCAACGTCCAGTACAAGCTGCATTCCTCTGG...TCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CAA 90 bp AAGTACTATGACTTGATTCCCACCCCAGAAGCGCCTTATTCAACCTGTTCTTGGGCAAATGTTGATGTCTaGGGTCTCCACAACATCGCA +
Preference number: 5 (lower is better)
Translates to: KYYDLIPTPEAPYSTCSWANVDV*GLHNIA
Trigger: TGCGATGTTGTGGAGACCCAAGACATCAACATTTGC...CCAAGAACAGGTTGAATAAGGCGCTTCTGGGGTGGGAATCAAGTCATAGTACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000340058.6
ENST00000671844.1
CDS-3UTR CAA 90 bp GGTCAGCTGTTTAGACCTGGAGTTCTTACCCTCCTGAGAACAAACCTGTTGCAGAGACCATACATCACTTaGCGTGGTGTAGATATGATC +
Preference number: 5 (lower is better)
Translates to: GQLFRPGVLTLLRTNLLQRPYIT*RGVDMI
Trigger: GATCATATCTACACCACGCAAAGTGATGTATGGTCT...CTGCAACAGGTTTGTTCTCAGGAGGGTAAGAACTCCAGGTCTAAACAGCTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp AATCCGACCCTGGCTCCTCTTCACGTAGGAATCCTCTTCATAAACATCTCGGGAAGACCATACATCACTTaGCGTGGTGTAGATATGATC +
Preference number: 5 (lower is better)
Translates to: NPTLAPLHVGILFINISGRPYIT*RGVDMI
Trigger: GATCATATCTACACCACGCAAAGTGATGTATGGTCT...TCCCGAGATGTTTATGAAGAGGATTCCTACGTGAAGAGGAGCCAGGGTCGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000671844.1
ENST00000672389.1
CDS-3UTR CAA 90 bp GTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCATCTTCTCCAGGTCTTaGCTGATGTCCGCAAACACC +
Preference number: 5 (lower is better)
Translates to: VLARTIFTVHCKTTAPQTIFSRS*LMSANT
Trigger: GGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGAT...GGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CAA 90 bp TCTGGGACTCCAACAGCCCCCTTTCTTCATACTGTTCTCATCAGGGGTAGTGGCCATATACACTATCATTaGGATATCTTGGAAACCCAG +
Preference number: 5 (lower is better)
Translates to: SGTPTAPFLHTVLIRGSGHIHYH*DILETQ
Trigger: CTGGGTTTCCAAGATATCCAAATGATAGTGTATATG...GCCACTACCCCTGATGAGAACAGTATGAAGAAAGGGGGCTGTTGGAGTCCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS TCA 90 bp ATCCCACCCTTCTTTGAGAAAAGAGCTAAGGTCATATCAGAACGGTaGCCTTTATTCTGCAGAAGAGGACTGTTAGTTCCGCAGCATGAG +
Preference number: 5 (lower is better)
Translates to: IPPFFEKRAKVISER*PLFCRRGLLVPQHE
Trigger: CTCATGCTGCGGAACTAACAGTCCTCTTCTGCAGAATAAAGGTCACCGTTCTGATATGACCTTAGCTCTTTTCTCAAAGAAGGGTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS-3UTR CAA 90 bp ATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCATGTTCTTTCAAAAATGGAAGTCTGAGTCATaGACCAGCACCGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: IFTVHCKTTAPQTMFFQKWKSES*TSTASC
Trigger: GCAGCTGGCGGTGCTGGTCAATGACTCAGACTTCCA...TTTTTGAAAGAACATGGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CAA 90 bp AAATCACCGGCTATCAGAAGTAAAACCACCTTGGAAGTTAAAACAAACTACCAATGGAAGTCTGAGTCATaGACCAGCACCGCCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KSPAIRSKTTLEVKTNYQWKSES*TSTASC
Trigger: GCAGCTGGCGGTGCTGGTCAATGACTCAGACTTCCA...TTGGTAGTTTGTTTTAACTTCCAAGGTGGTTTTACTTCTGATAGCCGGTGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp AAACAAGCAATGAAGAATGACAAGAAGCTTATGAGTCATGGTCAGAATCTAAGAGGCAGCACCGACACGTaGAAGTGGAGCAAGAGGACG +
Preference number: 5 (lower is better)
Translates to: KQAMKNDKKLMSHGQNLRGSTDT*KWSKRT
Trigger: CGTCCTCTTGCTCCACTTCAACGTGTCGGTGCTGCC...TCTTAGATTCTGACCATGACTCATAAGCTTCTTGTCATTCTTCATTGCTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp TGTAATCAGAGGTGTAGCAGTCCTTGGTCATTGTCATTGCTACTTCTAACACAGATCTTCTCCAGGTCTTaGCTGATGTCCGCAAACACC +
Preference number: 5 (lower is better)
Translates to: CNQRCSSPWSLSLLLLTQIFSRS*LMSANT
Trigger: GGTGTTTGCGGACATCAGCAAAGACCTGGAGAAGAT...CTGTGTTAGAAGTAGCAATGACAATGACCAAGGACTGCTACACCTCTGATTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS GCA 90 bp TGCTTAACTCTTTTTCTAAGGCAGTGTAGGGCAACAGCACACTGCTaGACTCAATGGCTTACTGCAGCGGAAACGTTCTATAAAACATTC +
Preference number: 5 (lower is better)
Translates to: CLTLFLRQCRATAHC*TQWLTAAETFYKTF
Trigger: GAATGTTTTATAGAACGTTTCCGCTGCAGTAAGCCATTGAGTGCAGCAGTGTGCTGTTGCCCTACACTGCCTTAGAAAAAGAGTTAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615310.5
ENST00000683007.1
CDS GCA 90 bp AACTGCTTAACTCTTTTTCTAAGGCAGTGTAGGGCAACAGCACACTaGTGCACTCAATGGCTTACTGCAGCGGAAACGTTCTATAAAACA +
Preference number: 5 (lower is better)
Translates to: NCLTLFLRQCRATAH*CTQWLTAAETFYKT
Trigger: TGTTTTATAGAACGTTTCCGCTGCAGTAAGCCATTGAGTGCAGCAGTGTGCTGTTGCCCTACACTGCCTTAGAAAAAGAGTTAAGCAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615310.5
ENST00000683007.1
CDS CCA 90 bp CTTTTTCTAAGGCAGTGTAGGGCAACAGCACACTGCTGCACTCAATaGCTTACTGCAGCGGAAACGTTCTATAAAACATTCTCTAACGTA +
Preference number: 5 (lower is better)
Translates to: LFLRQCRATAHCCTQ*LTAAETFYKTFSNV
Trigger: TACGTTAGAGAATGTTTTATAGAACGTTTCCGCTGCAGTAAGCCATTGAGTGCAGCAGTGTGCTGTTGCCCTACACTGCCTTAGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615310.5
ENST00000683007.1
CDS-3UTR CAA 90 bp GACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCAGGCAGTGTTTTGGCAGGCCCCATACAATTaGATGACATGTGGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: DYFKSYQCFKSEEQAVFWQAPYN*MTCGWL
Trigger: CAACCACCCACATGTCATCAAATTGTATGGGGCCTG...CCAAAACACTGCCTGCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp GTTTTGGCAAGAACCATATTTACTGTCCATTGTAAGACCACAGCACCACAGACCCTCTACCATCCTAAGTaGCTGGGCAATGTGGTAATT +
Preference number: 5 (lower is better)
Translates to: VLARTIFTVHCKTTAPQTLYHPK*LGNVVI
Trigger: AATTACCACATTGCCCAGCAACTTAGGATGGTAGAG...GGTCTGTGGTGCTGTGGTCTTACAATGGACAGTAAATATGGTTCTTGCCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000340058.6
CDS-3UTR CAA 90 bp TGTAATCAGAGGTGTAGCAGTCCTTGGTCATTGTCATTGCTACTTCTAACACAGAAGACTGGAGGAGTGTaGTGCATCTGTGACCACAAA +
Preference number: 5 (lower is better)
Translates to: CNQRCSSPWSLSLLLLTQKTGGV*CICDHK
Trigger: TTTGTGGTCACAGATGCACAACACTCCTCCAGTCTT...CTGTGTTAGAAGTAGCAATGACAATGACCAAGGACTGCTACACCTCTGATTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp TCTGCATTTACGTGTATGAAAATTCCAGTAGAGCTAATAAGGATGGGGACTTTTATGACATGTGGGTGGTaGACCTGCTTCAGGACGTTG +
Preference number: 5 (lower is better)
Translates to: SAFTCMKIPVELIRMGTFMTCGW*TCFRTL
Trigger: CAACGTCCTGAAGCAGGTCAACCACCCACATGTCAT...AAAAGTCCCCATCCTTATTAGCTCTACTGGAATTTTCATACACGTAAATGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp CAGTATTTGAATGAGACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCTGGATGCAGATCCAGTaGTTCTCATGCAGCCGTGTG +
Preference number: 5 (lower is better)
Translates to: QYLNETILSPISALSLKSWMQIQ*FSCSRV
Trigger: CACACGGCTGCATGAGAACAACTGGATCTGCATCCA...GCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTCTCATTCAAATACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp AGACAATTAGGTTATTGGTCAAGGATAAATTGGTCAAGGATAAATTCCCCATCAACCTGCTTCAGGACGTaGAACTCTGACAGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RQLGYWSRINWSRINSPSTCFRT*NSDSRS
Trigger: AGACCTGCTGTCAGAGTTCAACGTCCTGAAGCAGGT...TGATGGGGAATTTATCCTTGACCAATTTATCCTTGACCAATAACCTAATTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS TCA 90 bp CCAAAACTTCAAGTGCAGACAGTAAGGCCTTGGCAAAACTCCCTTTaGTGTTCAAACCAAACTCGTGGTTTCTGTGCCAATTATATTAAT +
Preference number: 5 (lower is better)
Translates to: PKLQVQTVRPWQNSL*CSNQTRGFCANYIN
Trigger: ATTAATATAATTGGCACAGAAACCACGAGTTTGGTTTGAACATCAAAGGGAGTTTTGCCAAGGCCTTACTGTCTGCACTTGAAGTTTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615310.5
ENST00000683007.1
CDS-3UTR CAA 90 bp CAGTATTTGAATGAGACTATTTTAAGTCCTATCAGTGCTTTAAGTCTGAAGAGCGCAAATGTTGATGTCTaGGGTCTCCACAACATCGCA +
Preference number: 5 (lower is better)
Translates to: QYLNETILSPISALSLKSANVDV*GLHNIA
Trigger: TGCGATGTTGTGGAGACCCAAGACATCAACATTTGC...GCTCTTCAGACTTAAAGCACTGATAGGACTTAAAATAGTCTCATTCAAATACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp ATAGTAAAGATGGCATGGAATCTCTCCATTGTGCTAAATCTAGGAATCATCTTAACGTGTCCATTAATTTaGCCGCTGAGGGTGAAAGCA +
Preference number: 5 (lower is better)
Translates to: IVKMAWNLSIVLNLGIILTCPLI*PLRVKA
Trigger: TGCTTTCACCCTCAGCGGCAAAATTAATGGACACGT...TAAGATGATTCCTAGATTTAGCACAATGGAGAGATTCCATGCCATCTTTACTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp AAACAAGCAATGAAGAATGACAAGAAGCTTATGAGTCATGGTCAGAATCTAAGAAGAGCAGGCAGTGTTTaGGTAATCCGACTCTTTTCT +
Preference number: 5 (lower is better)
Translates to: KQAMKNDKKLMSHGQNLRRAGSV*VIRLFS
Trigger: AGAAAAGAGTCGGATTACCAAAACACTGCCTGCTCT...TCTTAGATTCTGACCATGACTCATAAGCTTCTTGTCATTCTTCATTGCTTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp AAACAAGCAATGAAGAATGACAAGAAGCTTATGAGTCATGGTCAGAATCTAAGAAGCAGTCCTTGGTCATaGTCATTGCTACTTCTAACA +
Preference number: 5 (lower is better)
Translates to: KQAMKNDKKLMSHGQNLRSSPWS*SLLLLT
Trigger: TGTTAGAAGTAGCAATGACAATGACCAAGGACTGCT...TCTTAGATTCTGACCATGACTCATAAGCTTCTTGTCATTCTTCATTGCTTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS-3UTR CAA 90 bp ATAGTAAAGATGGCATGGAATCTCTCCATTGTGCTAAATCTAGGAATCATCTTATTCCTACTGCCTTTTTaGTGTGTGTGCTTCATGTTT +
Preference number: 5 (lower is better)
Translates to: IVKMAWNLSIVLNLGIILFLLPF*CVCFMF
Trigger: AAACATGAAGCACACACACAAAAAAGGCAGTAGGAA...TAAGATGATTCCTAGATTTAGCACAATGGAGAGATTCCATGCCATCTTTACTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355710.8
CDS TCA 72 bp CCCTCACCTGCGCACCAAGCAGACAGGGGCCCCGCGTaGTCACCAGCCGGGACCGGGCCAGCCGCTTTCCTC +
Preference number: 6 (lower is better)
Translates to: PSPAHQADRGPA*SPAGTGPAAFL
Trigger: GAGGAAAGCGGCTGGCCCGGTCCCGGCTGGTGATCACGCGGGGCCCCTGTCTGCTTGGTGCGCAGGTGAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683007.1
CDS GCA 72 bp CCATCACCACCTCCTCGCGCGCGCCGGCGTGCACGGTaGACACGGCCACCAGCTCGTACTTCTCCCGCTGCT +
Preference number: 6 (lower is better)
Translates to: PSPPPRARRRAR*TRPPARTSPAA
Trigger: AGCAGCGGGAGAAGTACGAGCTGGTGGCCGTGTGCACCGTGCACGCCGGCGCGCGCGAGGAGGTGGTGATGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000683007.1
CDS CCA 72 bp AAGCTGGGCACCTCCTCAGGGGCGTCCCGCAGGGCATaGACGTACAGCAAGGGCGTGCCGGCTGCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: KLGTSSGASRRA*TYSKGVPAAWS
Trigger: GGACCAGGCAGCCGGCACGCCCTTGCTGTACGTCCATGCCCTGCGGGACGCCCCTGAGGAGGTGCCCAGCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000638465.1
ENST00000640619.1
ENST00000671844.1
ENST00000683278.1
ENST00000684216.1
CDS CAA 90 bp ACGGTCGCCCGCACGAAGCTGCCGTTGGCCTGGACCGAGGTCTCGTaGGGCCAGTGTTCCACCCGGAAGGTCTGCTGGGCCCAGGTGTCC +
Preference number: 6 (lower is better)
Translates to: TVARTKLPLAWTEVS*GQCSTRKVCWAQVS
Trigger: GGACACCTGGGCCCAGCAGACCTTCCGGGTGGAACACTGGCCCAACGAGACCTCGGTCCAGGCCAACGGCAGCTTCGTGCGGGCGACCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS CAA 72 bp CTGGGCAGGTGCAGGCTGACCGGCAGCACCGACACGTaGAAGTGGAGCAAGAGGACGCCCGCTCCTGGGCCC +
Preference number: 6 (lower is better)
Translates to: LGRCRLTGSTDT*KWSKRTPAPGP
Trigger: GGGCCCAGGAGCGGGCGTCCTCTTGCTCCACTTCAACGTGTCGGTGCTGCCGGTCAGCCTGCACCTGCCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS CAA 90 bp CTGACTGCACAGGACAGGGGGCAGCCCGCCTCCTCGGCCACATCTTaGCCTAGCAGCGGCAGCAGCAGCAGCAACAGCAGACGCAGCCCC +
Preference number: 6 (lower is better)
Translates to: LTAQDRGQPASSATS*PSSGSSSSNSRRSP
Trigger: GGGGCTGCGTCTGCTGTTGCTGCTGCTGCTGCCGCTGCTAGGCAAAGATGTGGCCGAGGAGGCGGGCTGCCCCCTGTCCTGTGCAGTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498820.5
CDS GCA 72 bp GAGGTCTCGTTGGGCCAGTGTTCCACCCGGAAGGTCTaGTGGGCCCAGGTGTCCCCGGGGAGCAGCGTGCTT +
Preference number: 6 (lower is better)
Translates to: EVSLGQCSTRKV*WAQVSPGSSVL
Trigger: AAGCACGCTGCTCCCCGGGGACACCTGGGCCCAGCAGACCTTCCGGGTGGAACACTGGCCCAACGAGACCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS GCA 72 bp TTCCTAGGCTTCCCAAGGGCACTGCCTGCCCCATGGTaGACCTGGGATCCCTGGGAGCCCCGCCTCATCCCC +
Preference number: 6 (lower is better)
Translates to: FLGFPRALPAPW*TWDPWEPRLIP
Trigger: GGGGATGAGGCGGGGCTCCCAGGGATCCCAGGTGCACCATGGGGCAGGCAGTGCCCTTGGGAAGCCTAGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CCA 72 bp GTCTCGTTGGGCCAGTGTTCCACCCGGAAGGTCTGCTaGGCCCAGGTGTCCCCGGGGAGCAGCGTGCTTGTG +
Preference number: 6 (lower is better)
Translates to: VSLGQCSTRKVC*AQVSPGSSVLV
Trigger: CACAAGCACGCTGCTCCCCGGGGACACCTGGGCCCAGCAGACCTTCCGGGTGGAACACTGGCCCAACGAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS CCA 72 bp GCACGAAGCTGCCGTTGGCCTGGACCGAGGTCTCGTTaGGCCAGTGTTCCACCCGGAAGGTCTGCTGGGCCC +
Preference number: 6 (lower is better)
Translates to: ARSCRWPGPRSR*ASVPPGRSAGP
Trigger: GGGCCCAGCAGACCTTCCGGGTGGAACACTGGCCCAACGAGACCTCGGTCCAGGCCAACGGCAGCTTCGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS CAA 72 bp CGCACGAAGCTGCCGTTGGCCTGGACCGAGGTCTCGTaGGGCCAGTGTTCCACCCGGAAGGTCTGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: RTKLPLAWTEVS*GQCSTRKVCWA
Trigger: GGCCCAGCAGACCTTCCGGGTGGAACACTGGCCCAACGAGACCTCGGTCCAGGCCAACGGCAGCTTCGTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS CCA 72 bp TCATGTACGGTCGCCCGCACGAAGCTGCCGTTGGCCTaGACCGAGGTCTCGTTGGGCCAGTGTTCCACCCGG +
Preference number: 6 (lower is better)
Translates to: SCTVARTKLPLA*TEVSLGQCSTR
Trigger: CCGGGTGGAACACTGGCCCAACGAGACCTCGGTCCAGGCCAACGGCAGCTTCGTGCGGGCGACCGTACATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS CCA 72 bp GCACCACTGGGTACAGGCTGCGTATGCTCTGCCTCATaGCTCTCCAGCCTGCCGTGTCCGCGCCAGCTGGGA +
Preference number: 6 (lower is better)
Translates to: APLGTGCVCSAS*LSSLPCPRQLG
Trigger: TCCCAGCTGGCGCGGACACGGCAGGCTGGAGAGCCATGAGGCAGAGCATACGCAGCCTGTACCCAGTGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CCA 72 bp GCACAGTGGATCTGTGGGTGGGGGTGGTGTGAGGCTTaGCACCGCCAGAGGCTCGGCACCACTGGGTACAGG +
Preference number: 6 (lower is better)
Translates to: AQWICGWGWCEA*HRQRLGTTGYR
Trigger: CCTGTACCCAGTGGTGCCGAGCCTCTGGCGGTGCCAAGCCTCACACCACCCCCACCCACAGATCCACTGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CAA 72 bp CAGGACAGGGGGCAGCCCGCCTCCTCGGCCACATCTTaGCCTAGCAGCGGCAGCAGCAGCAGCAACAGCAGA +
Preference number: 6 (lower is better)
Translates to: QDRGQPASSATS*PSSGSSSSNSR
Trigger: TCTGCTGTTGCTGCTGCTGCTGCCGCTGCTAGGCAAAGATGTGGCCGAGGAGGCGGGCTGCCCCCTGTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498820.5
CDS CCA 72 bp CTTGTTGGGACCTCAGATGTGCTGTTGAGACCTCTGTaGGGCTGGGAGGTGGTGGTGGTCCCGGCCGCCACC +
Preference number: 6 (lower is better)
Translates to: LVGTSDVLLRPL*GWEVVVVPAAT
Trigger: GGTGGCGGCCGGGACCACCACCACCTCCCAGCCCCACAGAGGTCTCAACAGCACATCTGAGGTCCCAACAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CCA 72 bp CTGGGATCCCTGGGAGCCCCGCCTCATCCCCGGGACTaGGCACCTGGCTCCTCTTCACGTAGGAATCCTCTT +
Preference number: 6 (lower is better)
Translates to: LGSLGAPPHPRD*APGSSSRRNPL
Trigger: AAGAGGATTCCTACGTGAAGAGGAGCCAGGTGCCCAGTCCCGGGGATGAGGCGGGGCTCCCAGGGATCCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CAA 72 bp AGGACGCCCGCTCCTGGGCCCTGGAAGTCTGAGTCATaGACCAGCACCGCCAGCTGCATGGTGCGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: RTPAPGPWKSES*TSTASCMVRFS
Trigger: GGAGAACCGCACCATGCAGCTGGCGGTGCTGGTCAATGACTCAGACTTCCAGGGCCCAGGAGCGGGCGTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS TCA 72 bp GCAGACCCTCACCCTCCAGGAGCCTGTAGGCCACGCTaGTGTTGGGGCACAAGAACTGCACAGGCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: ADPHPPGACRPR*CWGTRTAQAAG
Trigger: GCCTGCTGCCTGTGCAGTTCTTGTGCCCCAACATCAGCGTGGCCTACAGGCTCCTGGAGGGTGAGGGTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
CDS GCA 72 bp CCAGCCTATAGTCATGTACGGTCGCCCGCACGAAGCTaGCGTTGGCCTGGACCGAGGTCTCGTTGGGCCAGT +
Preference number: 6 (lower is better)
Translates to: PAYSHVRSPARS*RWPGPRSRWAS
Trigger: ACTGGCCCAACGAGACCTCGGTCCAGGCCAACGGCAGCTTCGTGCGGGCGACCGTACATGACTATAGGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS GCA 72 bp TTCGGTATCTTTCCTAGGCTTCCCAAGGGCACTGCCTaGCCCATGGTGCACCTGGGATCCCTGGGAGCCCCG +
Preference number: 6 (lower is better)
Translates to: FGIFPRLPKGTA*PMVHLGSLGAP
Trigger: CGGGGCTCCCAGGGATCCCAGGTGCACCATGGGGCAGGCAGTGCCCTTGGGAAGCCTAGGAAAGATACCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CCA 72 bp CGTGTCCGCGCCAGCTGGGAAGTGGCCATGGAGGTGTaGGAAGGCCTGAGAACACCCCATCGAGCATGGGTA +
Preference number: 6 (lower is better)
Translates to: RVRASWEVAMEV*EGLRTPHRAWV
Trigger: TACCCATGCTCGATGGGGTGTTCTCAGGCCTTCCCACACCTCCATGGCCACTTCCCAGCTGGCGCGGACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CAA 90 bp TGGAGCAAGAGGACGCCCGCTCCTGGGCCCTGGAAGTCTGAGTCATaGACCAGCACCGCCAGCTGCATGGTGCGGTTCTCCGAGATGGAG +
Preference number: 6 (lower is better)
Translates to: WSKRTPAPGPWKSES*TSTASCMVRFSEME
Trigger: CTCCATCTCGGAGAACCGCACCATGCAGCTGGCGGTGCTGGTCAATGACTCAGACTTCCAGGGCCCAGGAGCGGGCGTCCTCTTGCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS TCA 72 bp TGGCCACTGGCACTCGCCCTCACGAAGGGATGTGGGTaGCAGGAAGACCTTGAGGTAGACGGTGAGCAGGGG +
Preference number: 6 (lower is better)
Translates to: WPLALALTKGCG*QEDLEVDGEQG
Trigger: CCCCTGCTCACCGTCTACCTCAAGGTCTTCCTGTCACCCACATCCCTTCGTGAGGGCGAGTGCCAGTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000638465.1
ENST00000671844.1
ENST00000683278.1
ENST00000684216.1
CDS TCA 72 bp TCACAAACAGGATCCCCGAGGTGTCCTCGGCTGAGGTaGCCACCCCTAGCGTGCTGCAGTTGGCACCAGAGG +
Preference number: 6 (lower is better)
Translates to: SQTGSPRCPRLR*PPLACCSWHQR
Trigger: CCTCTGGTGCCAACTGCAGCACGCTAGGGGTGGTCACCTCAGCCGAGGACACCTCGGGGATCCTGTTTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000671844.1
ENST00000672389.1
ENST00000683007.1
ENST00000683872.1
CDS GCA 72 bp CCGCAGGGCATGGACGTACAGCAAGGGCGTGCCGGCTaGCTGGTCCACATACAGCTTCTCCCAGTAAGCATC +
Preference number: 6 (lower is better)
Translates to: PQGMDVQQGRAG*LVHIQLLPVSI
Trigger: GATGCTTACTGGGAGAAGCTGTATGTGGACCAGGCAGCCGGCACGCCCTTGCTGTACGTCCATGCCCTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000638465.1
ENST00000640619.1
ENST00000671844.1
ENST00000683278.1
ENST00000684216.1
CDS GCA 72 bp CTTGAGGTAGACGGTGAGCAGGGGAAAGCCGCGGTCTaGAGAGAGAAGTCAGGTCTGTGGGGGCATCGGCCA +
Preference number: 6 (lower is better)
Translates to: LEVDGEQGKAAV*REKSGLWGHRP
Trigger: TGGCCGATGCCCCCACAGACCTGACTTCTCTCTGCAGACCGCGGCTTTCCCCTGCTCACCGTCTACCTCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000638465.1
CDS CCA 72 bp TTGAAGTGGAGCAAGAGGACGCCCGCTCCTGGGCCCTaGAAGTCTGAGTCATTGACCAGCACCGCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: LKWSKRTPAPGP*KSESLTSTASC
Trigger: GCAGCTGGCGGTGCTGGTCAATGACTCAGACTTCCAGGGCCCAGGAGCGGGCGTCCTCTTGCTCCACTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS CAA 90 bp CCCGAGGTGTCCTCGGCTGAGGTGACCACCCCTAGCGTGCTGCAGTaGGCACCAGAGGAATGCAGCTTGTACTGGACGTTGATGCCACTG +
Preference number: 6 (lower is better)
Translates to: PEVSSAEVTTPSVLQ*APEECSLYWTLMPL
Trigger: CAGTGGCATCAACGTCCAGTACAAGCTGCATTCCTCTGGTGCCAACTGCAGCACGCTAGGGGTGGTCACCTCAGCCGAGGACACCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000671844.1
ENST00000672389.1
ENST00000683007.1
ENST00000683872.1
CDS TCA 72 bp GAGCAGCGTGCTTGTGTACCGCCTCACCAGCTCCCCTaGTGCAGGTACCACGTCTGCATCGAAGACACGCAG +
Preference number: 6 (lower is better)
Translates to: EQRACVPPHQLP*CRYHVCIEDTQ
Trigger: CTGCGTGTCTTCGATGCAGACGTGGTACCTGCATCAGGGGAGCTGGTGAGGCGGTACACAAGCACGCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS TCA 72 bp GACTTTCCCGATCCTCCAGGAGCCTGTAGGCCACGCTaGTGTTGGGGCACAAGAACTGCACAGGCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: DFPDPPGACRPR*CWGTRTAQAAG
Trigger: GCCTGCTGCCTGTGCAGTTCTTGTGCCCCAACATCAGCGTGGCCTACAGGCTCCTGGAGGATCGGGAAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS GCA 72 bp AGATCCAGTTGTTCTCATGCAGCCGTGTGCGGTACGTaGCGTAGAGATGCTGGCCCAGGCGGAAGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: RSSCSHAAVCGT*RRDAGPGGSWA
Trigger: TGCCCAGCTTCCGCCTGGGCCAGCATCTCTACGGCACGTACCGCACACGGCTGCATGAGAACAACTGGATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000638465.1
ENST00000640619.1
ENST00000671844.1
ENST00000683278.1
ENST00000684216.1
CDS GCA 72 bp CCTGGATGCAGATCCAGTTGTTCTCATGCAGCCGTGTaGGGTACGTGCCGTAGAGATGCTGGCCCAGGCGGA +
Preference number: 6 (lower is better)
Translates to: PGCRSSCSHAAV*GTCRRDAGPGG
Trigger: TCCGCCTGGGCCAGCATCTCTACGGCACGTACCGCACACGGCTGCATGAGAACAACTGGATCTGCATCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000638465.1
ENST00000640619.1
ENST00000671844.1
ENST00000683278.1
ENST00000684216.1
CDS GCA 72 bp CCCTGGAAGTCTGAGTCATTGACCAGCACCGCCAGCTaGATGGTGCGGTTCTCCGAGATGGAGAGGTTCCGG +
Preference number: 6 (lower is better)
Translates to: PWKSESLTSTAS*MVRFSEMERFR
Trigger: CCGGAACCTCTCCATCTCGGAGAACCGCACCATGCAGCTGGCGGTGCTGGTCAATGACTCAGACTTCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS GCA 72 bp AGACTTTCCCGATCTGGGCAAATCGGCGAGCCCTCCTaGTCACGGAGAGGGAGTAGGTACTGGGCAGGTGCA +
Preference number: 6 (lower is better)
Translates to: RLSRSGQIGEPS*SRRGSRYWAGA
Trigger: TGCACCTGCCCAGTACCTACTCCCTCTCCGTGAGCAGGAGGGCTCGCCGATTTGCCCAGATCGGGAAAGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS CCA 72 bp AAGAAGGAGAAGTATACGCGGGCACAGCCTGGCCACTaGCACTCGCCCTCACGAAGGGATGTGGGTGACAGG +
Preference number: 6 (lower is better)
Translates to: KKEKYTRAQPGH*HSPSRRDVGDR
Trigger: CCTGTCACCCACATCCCTTCGTGAGGGCGAGTGCCAGTGGCCAGGCTGTGCCCGCGTATACTTCTCCTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000638465.1
ENST00000671844.1
ENST00000683278.1
ENST00000684216.1
CDS CCA 72 bp GGTGTTGAAGAAGGAGAAGTATACGCGGGCACAGCCTaGCCACTGGCACTCGCCCTCACGAAGGGATGTGGG +
Preference number: 6 (lower is better)
Translates to: GVEEGEVYAGTA*PLALALTKGCG
Trigger: CCCACATCCCTTCGTGAGGGCGAGTGCCAGTGGCCAGGCTGTGCCCGCGTATACTTCTCCTTCTTCAACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000638465.1
ENST00000671844.1
ENST00000683278.1
ENST00000684216.1
CDS CCA 72 bp TATAGTCATGTACGGTCGCCCGCACGAAGCTGCCGTTaGCCTGGACCGAGGTCTCGTTGGGCCAGTGTTCCA +
Preference number: 6 (lower is better)
Translates to: YSHVRSPARSCR*PGPRSRWASVP
Trigger: TGGAACACTGGCCCAACGAGACCTCGGTCCAGGCCAACGGCAGCTTCGTGCGGGCGACCGTACATGACTATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
CDS CCA 72 bp GGGGCCCACTCGCCTCCCAGCAATTTCCTCCCTTGTTaGGACCTCAGATGTGCTGTTGAGACCTCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: GAHSPPSNFLPC*DLRCAVETSVG
Trigger: CCCCACAGAGGTCTCAACAGCACATCTGAGGTCCCAACAAGGGAGGAAATTGCTGGGAGGCGAGTGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS GCA 72 bp CTGTTAGTTCCGCAGCATGAGGTGGCCTCTGAAAAGTaGGGCAAGGGCCTCGGGTCAGTATGCTGCCAGGGA +
Preference number: 6 (lower is better)
Translates to: LLVPQHEVASEK*GKGLGSVCCQG
Trigger: TCCCTGGCAGCATACTGACCCGAGGCCCTTGCCGCACTTTTCAGAGGCCACCTCATGCTGCGGAACTAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CCA 72 bp AGTGAAGTTCGGCACACTTGGGCCGCCGCAGGGCCTTaGTGTCATTCACAAACAGGATCCCCGAGGTGTCCT +
Preference number: 6 (lower is better)
Translates to: SEVRHTWAAAGP*CHSQTGSPRCP
Trigger: AGGACACCTCGGGGATCCTGTTTGTGAATGACACCAAGGCCCTGCGGCGGCCCAAGTGTGCCGAACTTCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000671844.1
ENST00000672389.1
ENST00000683007.1
ENST00000683872.1
CDS CCA 72 bp CGGTGGCCACCACCATGTAGTGAAGTTCGGCACACTTaGGCCGCCGCAGGGCCTTGGTGTCATTCACAAACA +
Preference number: 6 (lower is better)
Translates to: RWPPPCSEVRHT*AAAGPWCHSQT
Trigger: TGTTTGTGAATGACACCAAGGCCCTGCGGCGGCCCAAGTGTGCCGAACTTCACTACATGGTGGTGGCCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000671844.1
ENST00000672389.1
ENST00000683007.1
ENST00000683872.1
CDS CAA 72 bp TCCTCGGCTGAGGTGACCACCCCTAGCGTGCTGCAGTaGGCACCAGAGGAATGCAGCTTGTACTGGACGTTG +
Preference number: 6 (lower is better)
Translates to: SSAEVTTPSVLQ*APEECSLYWTL
Trigger: CAACGTCCAGTACAAGCTGCATTCCTCTGGTGCCAACTGCAGCACGCTAGGGGTGGTCACCTCAGCCGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000671844.1
ENST00000672389.1
ENST00000683007.1
ENST00000683872.1
CDS CAA 90 bp GGGAACCAGGTGTCCCCAAGGGTGCCCACTGCCTGTTTCATAGACTaGGACAAAGCTGGGCTGCGTTTCTGGATCCTGTCCAGGGGGTTC +
Preference number: 6 (lower is better)
Translates to: GNQVSPRVPTACFID*DKAGLRFWILSRGF
Trigger: GAACCCCCTGGACAGGATCCAGAAACGCAGCCCAGCTTTGTCCAAGTCTATGAAACAGGCAGTGGGCACCCTTGGGGACACCTGGTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS GCA 72 bp CATGGTAGGGAACCAGGTGTCCCCAAGGGTGCCCACTaGCTGTTTCATAGACTTGGACAAAGCTGGGCTGCG +
Preference number: 6 (lower is better)
Translates to: HGREPGVPKGAH*LFHRLGQSWAA
Trigger: CGCAGCCCAGCTTTGTCCAAGTCTATGAAACAGGCAGTGGGCACCCTTGGGGACACCTGGTTCCCTACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS GCA 72 bp ACCACCCCTAGCGTGCTGCAGTTGGCACCAGAGGAATaGAGCTTGTACTGGACGTTGATGCCACTGAATGCC +
Preference number: 6 (lower is better)
Translates to: TTPSVLQLAPEE*SLYWTLMPLNA
Trigger: GGCATTCAGTGGCATCAACGTCCAGTACAAGCTGCATTCCTCTGGTGCCAACTGCAGCACGCTAGGGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000671844.1
ENST00000672389.1
ENST00000683007.1
ENST00000683872.1
CDS GCA 72 bp GCCTACAACGGAGAAGAGGACCTTCCAAATCGAGGGTaGACACGGGCCAGCCTCATAGCATCGTCAGCACAA +
Preference number: 6 (lower is better)
Translates to: AYNGEEDLPNRG*TRASLIASSAQ
Trigger: TTGTGCTGACGATGCTATGAGGCTGGCCCGTGTGCACCCTCGATTTGGAAGGTCCTCTTCTCCGTTGTAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615310.5
ENST00000683007.1
CDS GCA 72 bp TGCCTGGCAGTTTTCCACACAGACTTTCCCGATCTTTaGCTAGCAGCGGCAGCAGCAGCAGCAACAGCAGAC +
Preference number: 6 (lower is better)
Translates to: CLAVFHTDFPDL*LAAAAAAATAD
Trigger: GTCTGCTGTTGCTGCTGCTGCTGCCGCTGCTAGGCAAAGATCGGGAAAGTCTGTGTGGAAAACTGCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672389.1
CDS CCA 72 bp GGTGCCCACTGCCTGTTTCATAGACTTGGACAAAGCTaGGCTGCGTTTCTGGATCCTGTCCAGGGGGTTCCT +
Preference number: 6 (lower is better)
Translates to: GAHCLFHRLGQS*AAFLDPVQGVP
Trigger: AGGAACCCCCTGGACAGGATCCAGAAACGCAGCCCAGCTTTGTCCAAGTCTATGAAACAGGCAGTGGGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CAA 72 bp CCTAGCGTGCTGCAGTTGGCACCAGAGGAATGCAGCTaGTACTGGACGTTGATGCCACTGAATGCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: PSVLQLAPEECS*YWTLMPLNAWQ
Trigger: CTGCCAGGCATTCAGTGGCATCAACGTCCAGTACAAGCTGCATTCCTCTGGTGCCAACTGCAGCACGCTAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000671844.1
ENST00000672389.1
ENST00000683007.1
ENST00000683872.1
CDS CAA 72 bp TCAGTGTGGCTGTGCAACCCACCATACCTGCTGACCTaGAAATGTGTTCCTGGGTGGGTCCCAGCTGCATGG +
Preference number: 6 (lower is better)
Translates to: SVWLCNPPYLLT*KCVPGWVPAAW
Trigger: CCATGCAGCTGGGACCCACCCAGGAACACATTTCAAGGTCAGCAGGTATGGTGGGTTGCACAGCCACACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CAA 90 bp GTGACCACCCCTAGCGTGCTGCAGTTGGCACCAGAGGAATGCAGCTaGTACTGGACGTTGATGCCACTGAATGCCTGGCAGTTTTCCACA +
Preference number: 6 (lower is better)
Translates to: VTTPSVLQLAPEECS*YWTLMPLNAWQFST
Trigger: TGTGGAAAACTGCCAGGCATTCAGTGGCATCAACGTCCAGTACAAGCTGCATTCCTCTGGTGCCAACTGCAGCACGCTAGGGGTGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000615310.5
ENST00000671844.1
ENST00000672389.1
ENST00000683007.1
ENST00000683872.1
CDS TCA 72 bp CCTGGGTGGGTCCCAGCTGCATGGTCACAGGGACAGTaGCTTGTCAGGCTGACAAGTTGTTTGGTGGAAGAA +
Preference number: 6 (lower is better)
Translates to: PGWVPAAWSQGQ*LVRLTSCLVEE
Trigger: TTCTTCCACCAAACAACTTGTCAGCCTGACAAGTCACTGTCCCTGTGACCATGCAGCTGGGACCCACCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CCA 72 bp AGGTCACACAGCAGAGGCTGTGCTCATTACACCAGCTaGCACTGGAGGGCTGGCAGGGGAGGTCAAAATTTT +
Preference number: 6 (lower is better)
Translates to: RSHSRGCAHYTS*HWRAGRGGQNF
Trigger: AAAATTTTGACCTCCCCTGCCAGCCCTCCAGTGCCAGCTGGTGTAATGAGCACAGCCTCTGCTGTGTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CAA 72 bp ATGCCTGGCAGTTTTCCACACAGACTTTCCCGATCTTaGCCTAGCAGCGGCAGCAGCAGCAGCAACAGCAGA +
Preference number: 6 (lower is better)
Translates to: MPGSFPHRLSRS*PSSGSSSSNSR
Trigger: TCTGCTGTTGCTGCTGCTGCTGCCGCTGCTAGGCAAAGATCGGGAAAGTCTGTGTGGAAAACTGCCAGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672389.1
CDS GCA 72 bp GGTACTGCCATTTACTGCCCCCTCCTAGACCACTATTaGCCTCTTACAGATGGAGACAGAGGCTCAGAGAGG +
Preference number: 6 (lower is better)
Translates to: GTAIYCPLLDHY*PLTDGDRGSER
Trigger: CCTCTCTGAGCCTCTGTCTCCATCTGTAAGAGGGCAATAGTGGTCTAGGAGGGGGCAGTAAATGGCAGTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CAA 72 bp GGGTACTGCCATTTACTGCCCCCTCCTAGACCACTATaGCCCTCTTACAGATGGAGACAGAGGCTCAGAGAG +
Preference number: 6 (lower is better)
Translates to: GYCHLLPPPRPL*PSYRWRQRLRE
Trigger: CTCTCTGAGCCTCTGTCTCCATCTGTAAGAGGGCAATAGTGGTCTAGGAGGGGGCAGTAAATGGCAGTACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS TCA 72 bp AGTGTGGCACTAGACACAAAGCCAGTGAGGAGTCAGTaGGTCAGGAGGCATGCAAAAGGAACCGTCTCAGCT +
Preference number: 6 (lower is better)
Translates to: SVALDTKPVRSQ*VRRHAKGTVSA
Trigger: AGCTGAGACGGTTCCTTTTGCATGCCTCCTGACTCACTGACTCCTCACTGGCTTTGTGTCTAGTGCCACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615310.5
ENST00000683007.1
CDS GCA 72 bp GAGAACACCCCATCGAGCATGGGTACTGCCATTTACTaGCCCCTCCTAGACCACTATTGCCCTCTTACAGAT +
Preference number: 6 (lower is better)
Translates to: ENTPSSMGTAIY*PLLDHYCPLTD
Trigger: ATCTGTAAGAGGGCAATAGTGGTCTAGGAGGGGGCAGTAAATGGCAGTACCCATGCTCGATGGGGTGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CCA 72 bp TGCAGCTTGTACTGGACGTTGATGCCACTGAATGCCTaGCAGTTTTCCACACAGACTTTCCCGATCTGGGCA +
Preference number: 6 (lower is better)
Translates to: CSLYWTLMPLNA*QFSTQTFPIWA
Trigger: TGCCCAGATCGGGAAAGTCTGTGTGGAAAACTGCCAGGCATTCAGTGGCATCAACGTCCAGTACAAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340058.6
ENST00000355710.8
ENST00000683007.1
ENST00000683872.1
CDS CCA 72 bp TGCAGCTTGTACTGGACGTTGATGCCACTGAATGCCTaGCAGTTTTCCACACAGACTTTCCCGATCCTCCAG +
Preference number: 6 (lower is better)
Translates to: CSLYWTLMPLNA*QFSTQTFPILQ
Trigger: CTGGAGGATCGGGAAAGTCTGTGTGGAAAACTGCCAGGCATTCAGTGGCATCAACGTCCAGTACAAGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000671844.1
CDS TCA 72 bp CAGCTGCATGGTCACAGGGACAGTGACTTGTCAGGCTaGCAAGTTGTTTGGTGGAAGAACTGCTTTTCTGGC +
Preference number: 6 (lower is better)
Translates to: QLHGHRDSDLSG*QVVWWKNCFSG
Trigger: GCCAGAAAAGCAGTTCTTCCACCAAACAACTTGTCAGCCTGACAAGTCACTGTCCCTGTGACCATGCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CCA 72 bp TGCAGCTTGTACTGGACGTTGATGCCACTGAATGCCTaGCAGTTTTCCACACAGACTTTCCCGATCTCCTTC +
Preference number: 6 (lower is better)
Translates to: CSLYWTLMPLNA*QFSTQTFPISF
Trigger: GAAGGAGATCGGGAAAGTCTGTGTGGAAAACTGCCAGGCATTCAGTGGCATCAACGTCCAGTACAAGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615310.5
CDS CCA 72 bp TGCAGCTTGTACTGGACGTTGATGCCACTGAATGCCTaGCAGTTTTCCACACAGACTTTCCCGATCTTTGCC +
Preference number: 6 (lower is better)
Translates to: CSLYWTLMPLNA*QFSTQTFPIFA
Trigger: GGCAAAGATCGGGAAAGTCTGTGTGGAAAACTGCCAGGCATTCAGTGGCATCAACGTCCAGTACAAGCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672389.1
CDS GCA 72 bp ACTCTTTTTCTAAGGCAGTGTAGGGCAACAGCACACTaGTGCACTCAATGGCTTACTGCAGCGGAAACGTTC +
Preference number: 6 (lower is better)
Translates to: TLFLRQCRATAH*CTQWLTAAETF
Trigger: GAACGTTTCCGCTGCAGTAAGCCATTGAGTGCAGCAGTGTGCTGTTGCCCTACACTGCCTTAGAAAAAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615310.5
ENST00000683007.1
CDS CAA 72 bp ATGGTCACAGGGACAGTGACTTGTCAGGCTGACAAGTaGTTTGGTGGAAGAACTGCTTTTCTGGCCTGTCCA +
Preference number: 6 (lower is better)
Translates to: MVTGTVTCQADK*FGGRTAFLACP
Trigger: TGGACAGGCCAGAAAAGCAGTTCTTCCACCAAACAACTTGTCAGCCTGACAAGTCACTGTCCCTGTGACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS GCA 72 bp CTTTTTCTAAGGCAGTGTAGGGCAACAGCACACTGCTaGACTCAATGGCTTACTGCAGCGGAAACGTTCTAT +
Preference number: 6 (lower is better)
Translates to: LFLRQCRATAHC*TQWLTAAETFY
Trigger: ATAGAACGTTTCCGCTGCAGTAAGCCATTGAGTGCAGCAGTGTGCTGTTGCCCTACACTGCCTTAGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615310.5
ENST00000683007.1
CDS CCA 72 bp AGGCAGTGTAGGGCAACAGCACACTGCTGCACTCAATaGCTTACTGCAGCGGAAACGTTCTATAAAACATTC +
Preference number: 6 (lower is better)
Translates to: RQCRATAHCCTQ*LTAAETFYKTF
Trigger: GAATGTTTTATAGAACGTTTCCGCTGCAGTAAGCCATTGAGTGCAGCAGTGTGCTGTTGCCCTACACTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615310.5
ENST00000683007.1
CDS CAA 90 bp CCCCTGTGCGGGAGAAGCCTCACTTGTAAAGCAGTTCATTCCTTTTaGCAAAGAATGACGATCCTGCTAATTTCATCCCACCCTTCTTTG +
Preference number: 6 (lower is better)
Translates to: PLCGRSLTCKAVHSF*QRMTILLISSHPSL
Trigger: CAAAGAAGGGTGGGATGAAATTAGCAGGATCGTCATTCTTTGCAAAAAGGAATGAACTGCTTTACAAGTGAGGCTTCTCCCGCACAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS GCA 72 bp AATACCAGAAAACTCAATGACAGAAACGTGTCCCTATaGTCAGGCAGAACAGCACCCCTGAGTGTAGTCAGT +
Preference number: 6 (lower is better)
Translates to: NTRKLNDRNVSL*SGRTAPLSVVS
Trigger: ACTGACTACACTCAGGGGTGCTGTTCTGCCTGAGCATAGGGACACGTTTCTGTCATTGAGTTTTCTGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS TCA 72 bp CAAGTGCAGACAGTAAGGCCTTGGCAAAACTCCCTTTaGTGTTCAAACCAAACTCGTGGTTTCTGTGCCAAT +
Preference number: 6 (lower is better)
Translates to: QVQTVRPWQNSL*CSNQTRGFCAN
Trigger: ATTGGCACAGAAACCACGAGTTTGGTTTGAACATCAAAGGGAGTTTTGCCAAGGCCTTACTGTCTGCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615310.5
ENST00000683007.1
CDS GCA 72 bp GTACAGGACTCTCTCCAGGCCAGTTCGGGTCTGACATaGCTAAAAATGAAAACAGATCATTTGTTCTGCACT +
Preference number: 6 (lower is better)
Translates to: VQDSLQASSGLT*LKMKTDHLFCT
Trigger: AGTGCAGAACAAATGATCTGTTTTCATTTTTAGGCATGTCAGACCCGAACTGGCCTGGAGAGAGTCCTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615310.5
ENST00000683007.1
CDS CCA 72 bp AGGCTGACAAGTTGTTTGGTGGAAGAACTGCTTTTCTaGCCTGTCCATCATAGAACTTATGGCCAGAAGACA +
Preference number: 6 (lower is better)
Translates to: RLTSCLVEELLF*PVHHRTYGQKT
Trigger: TGTCTTCTGGCCATAAGTTCTATGATGGACAGGCCAGAAAAGCAGTTCTTCCACCAAACAACTTGTCAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS CAA 72 bp TCAAGTGCAGACAGTAAGGCCTTGGCAAAACTCCCTTaGATGTTCAAACCAAACTCGTGGTTTCTGTGCCAA +
Preference number: 6 (lower is better)
Translates to: SSADSKALAKLP*MFKPNSWFLCQ
Trigger: TTGGCACAGAAACCACGAGTTTGGTTTGAACATCAAAGGGAGTTTTGCCAAGGCCTTACTGTCTGCACTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615310.5
ENST00000683007.1
CDS CAA 72 bp GGGAGAAGCCTCACTTGTAAAGCAGTTCATTCCTTTTaGCAAAGAATGACGATCCTGCTAATTTCATCCCAC +
Preference number: 6 (lower is better)
Translates to: GRSLTCKAVHSF*QRMTILLISSH
Trigger: GTGGGATGAAATTAGCAGGATCGTCATTCTTTGCAAAAAGGAATGAACTGCTTTACAAGTGAGGCTTCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683872.1
CDS TCA 72 bp TTCTTTGAGAAAAGAGCTAAGGTCATATCAGAACGGTaGCCTTTATTCTGCAGAAGAGGACTGTTAGTTCCG +
Preference number: 6 (lower is better)
Translates to: FFEKRAKVISER*PLFCRRGLLVP
Trigger: CGGAACTAACAGTCCTCTTCTGCAGAATAAAGGTCACCGTTCTGATATGACCTTAGCTCTTTTCTCAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683872.1