RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for REST (Homo sapiens)

Ensembl gene IDs: ENSG00000084093

Ensembl transcript IDs: ENST00000309042.12, ENST00000514063.2, ENST00000611211.2, ENST00000616975.5, ENST00000619101.5, ENST00000622863.4, ENST00000638187.2, ENST00000640168.2, ENST00000640343.2, ENST00000675105.1, ENST00000675249.1, ENST00000675341.1

Found 636 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCACTTCCTTCATGGCTGTGGATGCCTTCATCTTCATCAATTTCCTaGGACTCATTTGCTGCCATTGTAGCAGGAGGTGATGCCAGTGCA +
Preference number: 1 (lower is better)
Translates to: SLPSWLWMPSSSSIS*DSFAAIVAGGDASA
Trigger: TGCACTGGCATCACCTCCTGCTACAATGGCAGCAAATGAGTCTCAGGAAATTGATGAAGATGAAGGCATCCACAGCCATGAAGGAAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR TCA 90 bp TTCATCAATTTCCTGAGACTCATTTGCTGCCATTGTAGCAGGAGGTaGTGCCAGTGCAGTTTTGGACACTGCTTCACGTTCTTCTACTGC +
Preference number: 1 (lower is better)
Translates to: FINFLRLICCHCSRR*CQCSFGHCFTFFYC
Trigger: GCAGTAGAAGAACGTGAAGCAGTGTCCAAAACTGCACTGGCATCACCTCCTGCTACAATGGCAGCAAATGAGTCTCAGGAAATTGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR GCA 90 bp ACAGTGTGGGCAATTAAGAGGTTTAGGCCCATTGTGAACCTGTCTTaGATGGCGGGTTACTTCATGTTGATTAGAGGCCACATAACTGCA +
Preference number: 1 (lower is better)
Translates to: TVWAIKRFRPIVNLS*MAGYFMLIRGHITA
Trigger: TGCAGTTATGTGGCCTCTAATCAACATGAAGTAACCCGCCATGCAAGACAGGTTCACAATGGGCCTAAACCTCTTAATTGCCCACACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR GCA 90 bp CCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATaGCTTCATCTTCATCAATTTCCTGAGACTCATTTGCTGCCATTG +
Preference number: 1 (lower is better)
Translates to: PLTCCHLGHFLHGCG*LHLHQFPETHLLPL
Trigger: CAATGGCAGCAAATGAGTCTCAGGAAATTGATGAAGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR CCA 90 bp GTTTCACCCTCTGGCGTATTCAAGTTTTGTCCAGAGGATGAAATATaGGTAGATTCGTTGATATTAGCAGCAAGACCAGGTAGGCTCTCA +
Preference number: 1 (lower is better)
Translates to: VSPSGVFKFCPEDEI*VDSLILAARPGRLS
Trigger: TGAGAGCCTACCTGGTCTTGCTGCTAATATCAACGAATCTACCCATATTTCATCCTCTGGACAAAACTTGAATACGCCAGAGGGTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR GCA 90 bp AGAACTGAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTaGTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTG +
Preference number: 1 (lower is better)
Translates to: RTETLFKVSLLLPLS*FFKIVHINQMAIEV
Trigger: CACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTCAGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGACAGGGCAATTGAACTaGCGTGGGTTCACATGTAGC +
Preference number: 2 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLTGQLN*RGFTCS
Trigger: GCTACATGTGAACCCACGGCAGTTCAATTGCCCTGT...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGACACTTCTTGGAAGCTaGATAGTCACATACAGGGCA +
Preference number: 2 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLTLLGS*IVTYRA
Trigger: TGCCCTGTATGTGACTATGCAGCTTCCAAGAAGTGT...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGAGTCACCTGGATCACTaGCACATTATTAGAAGGCTT +
Preference number: 2 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLSHLDH*HIIRRL
Trigger: AAGCCTTCTAATAATGTGTCAGTGATCCAGGTGACT...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGTTTCACCTCTGTTACTaGTTTTCGAGTTCTGGTAGT +
Preference number: 2 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLFHLCY*FSSSGS
Trigger: ACTACCAGAACTCGAAAATCAGTAACAGAGGTGAAA...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGCCCTTTGGCACTTCCTaGCTATTATTTTTGGATTTG +
Preference number: 2 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLPFGTS*LLFLDL
Trigger: CAAATCCAAAAATAATAGTCAGGAAGTGCCAAAGGG...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCTGGGCACCCACCATCTaGGCAGGCTCCACGGGAGGC +
Preference number: 2 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCWAPTI*AGSTGG
Trigger: GCCTCCCGTGGAGCCTGCTCAGATGGTGGGTGCCCA...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR CAA 90 bp GGCCGAGCCCCATGCAATCCAGAATCATCACTACCCTCTGACATGTaGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCT +
Preference number: 2 (lower is better)
Translates to: GRAPCNPESSLPSDM*SLRSLPSWLWMPSS
Trigger: AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTCTGGATTGCATGGGGCTCGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR CAA 90 bp GACTCATTTGCTGCCATTGTAGCAGGAGGTGATGCCAGTGCAGTTTaGGACACTGCTTCACGTTCTTCTACTGCTGAAGGGGGAAGCATT +
Preference number: 2 (lower is better)
Translates to: DSFAAIVAGGDASAV*DTASRSSTAEGGSI
Trigger: AATGCTTCCCCCTTCAGCAGTAGAAGAACGTGAAGCAGTGTCCAAAACTGCACTGGCATCACCTCCTGCTACAATGGCAGCAAATGAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGGGTTTAGGCCCATTGTaGACCTGTCTTGCATGGCGG +
Preference number: 2 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLGLGPL*TCLAWR
Trigger: CCGCCATGCAAGACAGGTTCACAATGGGCCTAAACC...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTGGGCACCCACCATCTaGGCAGGCTCCACGGGAGGC +
Preference number: 2 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTWAPTI*AGSTGG
Trigger: GCCTCCCGTGGAGCCTGCTCAGATGGTGGGTGCCCA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CCA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCTCTGAGCATGCTCCATaGGAGGTGGCGGCTCCACCT +
Preference number: 2 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCSEHAP*EVAAPP
Trigger: AGGTGGAGCCGCCACCTCCCATGGAGCATGCTCAGA...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTTCTGGACCACCTGCATaGGAGCAGATTCTACCTGGG +
Preference number: 2 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCSGPPA*EQILPG
Trigger: CCCAGGTAGAATCTGCTCCCATGCAGGTGGTCCAGA...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CCA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTTCTGAACCACCCCCATaGGAGGAGACAACTCCATCT +
Preference number: 2 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSSEPPP*EETTPS
Trigger: AGATGGAGTTGTCTCCTCCCATGGGGGTGGTTCAGA...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTCACATACAGGGCAATTaGACTGCCGTGGGTTCACAT +
Preference number: 2 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSHIQGN*TAVGSH
Trigger: ATGTGAACCCACGGCAGTTCAATTGCCCTGTATGTG...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGCACATACAGGGCAATTaGACTGCCGTGGGTTCACAT +
Preference number: 2 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLHIQGN*TAVGSH
Trigger: ATGTGAACCCACGGCAGTTCAATTGCCCTGTATGTG...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGAGGCAGCTCCATGTaGGCAAGTACAATTTGGGCA +
Preference number: 2 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCGGSSM*ASTIWA
Trigger: TGCCCAAATTGTACTTGCTCACATGGAGCTGCCTCC...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTACAGGGCAATTGAACTaGCGTGGGTTCACATGTAGC +
Preference number: 2 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSTGQLN*RGFTCS
Trigger: GCTACATGTGAACCCACGGCAGTTCAATTGCCCTGT...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTTCAACAGGTTCCTTCTaGGGAGGCTTACTGCTTTTC +
Preference number: 2 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSSTGSF*GGLLLF
Trigger: GAAAAGCAGTAAGCCTCCTCAGAAGGAACCTGTTGA...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGAGGGGGAAGCATTGGTaGAACTGGTTCTTCAACTGT +
Preference number: 2 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLRGKHW*NWFFNC
Trigger: ACAGTTGAAGAACCAGTTTCACCAATGCTTCCCCCT...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTAGGGGGAAGCATTGGTaGAACTGGTTCTTCAACTGT +
Preference number: 2 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCRGKHW*NWFFNC
Trigger: ACAGTTGAAGAACCAGTTTCACCAATGCTTCCCCCT...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGATTGTGAACCTGTCTTaGATGGCGGGTTACTTCATG +
Preference number: 2 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLIVNLS*MAGYFM
Trigger: CATGAAGTAACCCGCCATGCAAGACAGGTTCACAAT...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGACTTCAATAAGGACTTaGTCCTTCCGTGCCCTTTCA +
Preference number: 2 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLTSIRT*SFRALS
Trigger: TGAAAGGGCACGGAAGGAGCAAGTCCTTATTGAAGT...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGGGACCATGTAAAGAATaGCTGTCAACTTCCAGCTTC +
Preference number: 2 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLGPCKE*LSTSSF
Trigger: GAAGCTGGAAGTTGACAGCCATTCTTTACATGGTCC...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CCA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTATGCCAGTGCAGTTTTaGACACTGCTTCACGTTCTT +
Preference number: 2 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSMPVQF*TLLHVL
Trigger: AAGAACGTGAAGCAGTGTCCAAAACTGCACTGGCAT...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR CAA 90 bp GGCGTATTCAAGTTTTGTCCAGAGGATGAAATATGGGTAGATTCGTaGATATTAGCAGCAAGACCAGGTAGGCTCTCATCTGCCTCTTCT +
Preference number: 2 (lower is better)
Translates to: GVFKFCPEDEIWVDS*ILAARPGRLSSASS
Trigger: AGAAGAGGCAGATGAGAGCCTACCTGGTCTTGCTGCTAATATCAACGAATCTACCCATATTTCATCCTCTGGACAAAACTTGAATACGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCCACATACAGGGCAATTaGACTGCCGTGGGTTCACAT +
Preference number: 2 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCHIQGN*TAVGSH
Trigger: ATGTGAACCCACGGCAGTTCAATTGCCCTGTATGTG...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTTGCAGTTTTGGACACTaGTTCACGTTCTTCTACTGC +
Preference number: 2 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCCSFGH*FTFFYC
Trigger: GCAGTAGAAGAACGTGAAGCAGTGTCCAAAACTGCA...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGAGAGGAGGCTTTTTaGAAATTGGCTCCATGTGAA +
Preference number: 2 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCGEEAF*KLAPCE
Trigger: TTCACATGGAGCCAATTTCCAAAAAGCCTCCTCTCC...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR CAA 90 bp TTTAGGCCCATTGTGAACCTGTCTTGCATGGCGGGTTACTTCATGTaGATTAGAGGCCACATAACTGCACTGATCACATTTAAATGGCTT +
Preference number: 2 (lower is better)
Translates to: FRPIVNLSCMAGYFM*IRGHITALITFKWL
Trigger: AAGCCATTTAAATGTGATCAGTGCAGTTATGTGGCCTCTAATCAACATGAAGTAACCCGCCATGCAAGACAGGTTCACAATGGGCCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTAACACCAACCATCTATaGGAAAAGGTTCTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSNTNHL*EKVLLK
Trigger: TTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTT...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTTGTAAAGTAGCCATATaGACACCAACCATCTATGAG +
Preference number: 2 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSCKVAI*TPTIYE
Trigger: CTCATAGATGGTTGGTGTTCATATGGCTACTTTACA...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTCTTCATCAATTTCCTaGGACTCATTTGCTGCCATT +
Preference number: 2 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLSSSIS*DSFAAI
Trigger: AATGGCAGCAAATGAGTCTCAGGAAATTGATGAAGA...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGAAGCTAACAGATACCTaGTGGTTTAGTACACTCTCT +
Preference number: 2 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLKLTDT*WFSTLS
Trigger: AGAGAGTGTACTAAACCAGCAGGTATCTGTTAGCTT...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGGTGAGAGATCCTCTGTaGTTACACTTTCCTTTAGAA +
Preference number: 2 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLVRDPL*LHFPLE
Trigger: TTCTAAAGGAAAGTGTAAGCACAGAGGATCTCTCAC...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTAACACCAACCATCTATaGGAAAAGGTTCTCCTCAAA +
Preference number: 2 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCNTNHL*EKVLLK
Trigger: TTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTT...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAATTGTGAACCTGTCTTaGATGGCGGGTTACTTCATG +
Preference number: 2 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKIIVNLS*MAGYFM
Trigger: CATGAAGTAACCCGCCATGCAAGACAGGTTCACAAT...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTCAACAGGTTCCTTCTaGGGAGGCTTACTGCTTTTC +
Preference number: 2 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTSTGSF*GGLLLF
Trigger: GAAAAGCAGTAAGCCTCCTCAGAAGGAACCTGTTGA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTACACTTCTTGGAAGCTaGATAGTCACATACAGGGCA +
Preference number: 2 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFTLLGS*IVTYRA
Trigger: TGCCCTGTATGTGACTATGCAGCTTCCAAGAAGTGT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCGAATTGCTTCCTGTATaGACATCCATCTCTTTCACC +
Preference number: 2 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCELLPV*TSISFT
Trigger: GGTGAAAGAGATGGATGTGCATACAGGAAGCAATTC...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCTGTAAAGTAGCCATATaGACACCAACCATCTATGAG +
Preference number: 2 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCCKVAI*TPTIYE
Trigger: CTCATAGATGGTTGGTGTTCATATGGCTACTTTACA...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCCCCTTTGGCACTTCCTaGCTATTATTTTTGGATTTG +
Preference number: 2 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCPFGTS*LLFLDL
Trigger: CAAATCCAAAAATAATAGTCAGGAAGTGCCAAAGGG...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATTATTCTCCTCCACTTTaGTGTCACCCTTTGGCACTT +
Preference number: 2 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYYSPPL*CHPLAL
Trigger: AAGTGCCAAAGGGTGACAGCAAAGTGGAGGAGAATA...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTTCTGAGGAGGCTTACTaGTTTTCTTACTTGATTTAT +
Preference number: 2 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCSEEAY*FSYLIY
Trigger: ATAAATCAAGTAAGAAAAGCAGTAAGCCTCCTCAGA...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATAGTCACCTGGATCACTaGCACATTATTAGAAGGCTT +
Preference number: 2 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYSHLDH*HIIRRL
Trigger: AAGCCTTCTAATAATGTGTCAGTGATCCAGGTGACT...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATTTCCTTCACCTGTGTTaGGTAATTTTTGGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYFLHLC*VIFGLL
Trigger: CAGGAGACCAAAAATTACTCAACACAGGTGAAGGAA...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTAAGCTAACAGATACCTaGTGGTTTAGTACACTCTCT +
Preference number: 2 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFKLTDT*WFSTLS
Trigger: AGAGAGTGTACTAAACCAGCAGGTATCTGTTAGCTT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
3UTR-3UTR GCA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCGAAGTTGCTTCTATCTaGTGTTTTGTAATCACAGTG +
Preference number: 2 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCEVASI*CFVITV
Trigger: CACTGTGATTACAAAACAGCAGATAGAAGCAACTTC...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGAATTGCTTCCTGTATaGACATCCATCTCTTTCACC +
Preference number: 2 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTELLPV*TSISFT
Trigger: GGTGAAAGAGATGGATGTGCATACAGGAAGCAATTC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATCGTGCCCTTTCACTCTaGATGTTAGACTTTTCCTTT +
Preference number: 2 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYRALSL*MLDFSF
Trigger: AAAGGAAAAGTCTAACATGCAGAGTGAAAGGGCACG...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR CAA 90 bp AAACTAAGAACTGAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTaGAGCTGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATT +
Preference number: 2 (lower is better)
Translates to: KLRTETLFKVSLLLP*SCFFKIVHINQMAI
Trigger: AATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTCAGTTCTTAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTTTCACCTCTGTTACTaGTTTTCGAGTTCTGGTAGT +
Preference number: 2 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTFHLCY*FSSSGS
Trigger: ACTACCAGAACTCGAAAATCAGTAACAGAGGTGAAA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTAAGCTAACAGATACCTaGTGGTTTAGTACACTCTCT +
Preference number: 2 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTKLTDT*WFSTLS
Trigger: AGAGAGTGTACTAAACCAGCAGGTATCTGTTAGCTT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
3UTR-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGAAGTTGCTTCTATCTaGTGTTTTGTAATCACAGTG +
Preference number: 2 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFEVASI*CFVITV
Trigger: CACTGTGATTACAAAACAGCAGATAGAAGCAACTTC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGTAGATTACACTTCTTaGAAGCTGCATAGTCACATA +
Preference number: 2 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFVDYTS*KLHSHI
Trigger: TATGTGACTATGCAGCTTCCAAGAAGTGTAATCTAC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTAAGCTAACAGATACCTaGTGGTTTAGTACACTCTCT +
Preference number: 2 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCKLTDT*WFSTLS
Trigger: AGAGAGTGTACTAAACCAGCAGGTATCTGTTAGCTT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
3UTR-3UTR CCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGTAGATTACACTTCTTaGAAGCTGCATAGTCACATA +
Preference number: 2 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTVDYTS*KLHSHI
Trigger: TATGTGACTATGCAGCTTCCAAGAAGTGTAATCTAC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTATTTGCTCACAAACTTaGACACACTATTATTCTGCA +
Preference number: 2 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTICSQT*THYYSA
Trigger: TGCAGAATAATAGTGTGTGCAAGTTTGTGAGCAAAT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
3UTR-3UTR GCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATTCTGAGGAGGCTTACTaGTTTTCTTACTTGATTTAT +
Preference number: 2 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYSEEAY*FSYLIY
Trigger: ATAAATCAAGTAAGAAAAGCAGTAAGCCTCCTCAGA...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGTCACATACAGGGCAATaGAACTGCCGTGGGTTCACA +
Preference number: 3 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLSHTGQ*NCRGFT
Trigger: TGTGAACCCACGGCAGTTCAATTGCCCTGTATGTGA...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGCTGATAGACTGTCTATaGCTGGGGGAATTTTTCTTC +
Preference number: 3 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLLIDCL*LGEFFF
Trigger: GAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAG...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGCTGAATTTTTCTGAATaGCTTCCTGTATGCACATCC +
Preference number: 3 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLLNFSE*LPVCTS
Trigger: GGATGTGCATACAGGAAGCAATTCAGAAAAATTCAG...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR TCA 72 bp TTCCTGAGACTCATTTGCTGCCATTGTAGCAGGAGGTaGTGCCAGTGCAGTTTTGGACACTGCTTCACGTTC +
Preference number: 3 (lower is better)
Translates to: FLRLICCHCSRR*CQCSFGHCFTF
Trigger: GAACGTGAAGCAGTGTCCAAAACTGCACTGGCATCACCTCCTGCTACAATGGCAGCAAATGAGTCTCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGGTGAGCAAGTACAATTaGGGCACCCACCATCTGAGC +
Preference number: 3 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLVSKYN*GTHHLS
Trigger: GCTCAGATGGTGGGTGCCCAAATTGTACTTGCTCAC...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR GCA 72 bp TTTCTGCTAGATTCTTGTGGAACTGGCCGAGCCCCATaGAATCCAGAATCATCACTACCCTCTGACATGTTG +
Preference number: 3 (lower is better)
Translates to: FLLDSCGTGRAP*NPESSLPSDML
Trigger: CAACATGTCAGAGGGTAGTGATGATTCTGGATTGCATGGGGCTCGGCCAGTTCCACAAGAATCTAGCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTCACATACAGGGCAATaGAACTGCCGTGGGTTCACA +
Preference number: 3 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLSHTGQ*NCRGFT
Trigger: TGTGAACCCACGGCAGTTCAATTGCCCTGTATGTGA...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGGAGGCTTTTTGGAAATaGGCTCCATGTGAAGGGGAG +
Preference number: 3 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLEAFWK*APCEGE
Trigger: CTCCCCTTCACATGGAGCCAATTTCCAAAAAGCCTC...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTCATTGTGAACCTGTCTaGCATGGCGGGTTACTTCAT +
Preference number: 3 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSHCEPV*HGGLLH
Trigger: ATGAAGTAACCCGCCATGCAAGACAGGTTCACAATG...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTCTGAAGGGGGAAGCATaGGTGAAACTGGTTCTTCAA +
Preference number: 3 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSLKGEA*VKLVLQ
Trigger: TTGAAGAACCAGTTTCACCAATGCTTCCCCCTTCAG...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTGCGGGTTACTTCATGTaGATTAGAGGCCACATAACT +
Preference number: 3 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSAGYFM*IRGHIT
Trigger: AGTTATGTGGCCTCTAATCAACATGAAGTAACCCGC...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTCTTTGCTGTCACCCTTaGGCACTTCCTGACTATTAT +
Preference number: 3 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSLCCHP*ALPDYY
Trigger: ATAATAGTCAGGAAGTGCCAAAGGGTGACAGCAAAG...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR TCA 72 bp ACTTCTTGGAAGCTGCATAGTCACATACAGGGCAATTaGACTGCCGTGGGTTCACATGTAGCTCTACATGTT +
Preference number: 3 (lower is better)
Translates to: TSWKLHSHIQGN*TAVGSHVALHV
Trigger: AACATGTAGAGCTACATGTGAACCCACGGCAGTTCAATTGCCCTGTATGTGACTATGCAGCTTCCAAGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR TCA 72 bp TCATGGCTGTGGATGCCTTCATCTTCATCAATTTCCTaGGACTCATTTGCTGCCATTGTAGCAGGAGGTGAT +
Preference number: 3 (lower is better)
Translates to: SWLWMPSSSSIS*DSFAAIVAGGD
Trigger: ATCACCTCCTGCTACAATGGCAGCAAATGAGTCTCAGGAAATTGATGAAGATGAAGGCATCCACAGCCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR GCA 72 bp TCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTaGTCCTTCCGTGCCCTTTCACTCTGCATGTTAGAC +
Preference number: 3 (lower is better)
Translates to: SLTGTKPTSIRT*SFRALSLCMLD
Trigger: GTCTAACATGCAGAGTGAAAGGGCACGGAAGGAGCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTCTCTTAAATTTTCCTTaGGCAGTGGTGGTGATGGTG +
Preference number: 3 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCLLNFP*AVVVMV
Trigger: CACCATCACCACCACTGCCAAAGGAAAATTTAAGAG...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCCAGCTACTTGGGAGGTaGAGGCAGGAGAATCGCTTG +
Preference number: 3 (lower is better)
Translates to: FFKIVHINQMAIEVFAVIQLLGR*RQENRL
Trigger: CAAGCGATTCTCCTGCCTCAACCTCCCAAGTAGCTG...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611211.2
3UTR-3UTR CAA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTCTGATAGACTGTCTATaGCTGGGGGAATTTTTCTTC +
Preference number: 3 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCLIDCL*LGEFFF
Trigger: GAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAG...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTAAATCTGGACTGTACTaGTTTCACCAGCCTTTTTCA +
Preference number: 3 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSKSGLY*FHQPFS
Trigger: TGAAAAAGGCTGGTGAAACAAGTACAGTCCAGATTT...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCTTATTCTCCTCCACTTaGCTGTCACCCTTTGGCACT +
Preference number: 3 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCLFSST*LSPFGT
Trigger: AGTGCCAAAGGGTGACAGCAAAGTGGAGGAGAATAA...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATGTGAGCAAGTACAATTaGGGCACCCACCATCTGAGC +
Preference number: 3 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYVSKYN*GTHHLS
Trigger: GCTCAGATGGTGGGTGCCCAAATTGTACTTGCTCAC...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGATATGGGTAGATTCGTaGATATTAGCAGCAAGACCA +
Preference number: 3 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLIWVDS*ILAARP
Trigger: TGGTCTTGCTGCTAATATCAACGAATCTACCCATAT...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGAAGAAAACTGCCCTTTaGCAAACAAGTCTAAAAGCA +
Preference number: 3 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLKKTAL*QTSLKA
Trigger: TGCTTTTAGACTTGTTTGCAAAAGGGCAGTTTTCTT...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCATTGTGAACCTGTCTaGCATGGCGGGTTACTTCAT +
Preference number: 3 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFHCEPV*HGGLLH
Trigger: ATGAAGTAACCCGCCATGCAAGACAGGTTCACAATG...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATTCACATACAGGGCAATaGAACTGCCGTGGGTTCACA +
Preference number: 3 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYSHTGQ*NCRGFT
Trigger: TGTGAACCCACGGCAGTTCAATTGCCCTGTATGTGA...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR GCA 72 bp ACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTaGTTCTTCAAGATAGTACACATTAACCAAATGGCG +
Preference number: 3 (lower is better)
Translates to: TLFKVSLLLPLS*FFKIVHINQMA
Trigger: CGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTAAGAAAACTGCCCTTTaGCAAACAAGTCTAAAAGCA +
Preference number: 3 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCKKTAL*QTSLKA
Trigger: TGCTTTTAGACTTGTTTGCAAAAGGGCAGTTTTCTT...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGCGGGTTACTTCATGTaGATTAGAGGCCACATAACT +
Preference number: 3 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFAGYFM*IRGHIT
Trigger: AGTTATGTGGCCTCTAATCAACATGAAGTAACCCGC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTGCGGGTTACTTCATGTaGATTAGAGGCCACATAACT +
Preference number: 3 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHIAGYFM*IRGHIT
Trigger: AGTTATGTGGCCTCTAATCAACATGAAGTAACCCGC...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTCATTGTGAACCTGTCTaGCATGGCGGGTTACTTCAT +
Preference number: 3 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTHCEPV*HGGLLH
Trigger: ATGAAGTAACCCGCCATGCAAGACAGGTTCACAATG...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTTATTCTCCTCCACTTaGCTGTCACCCTTTGGCACT +
Preference number: 3 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTLFSST*LSPFGT
Trigger: AGTGCCAAAGGGTGACAGCAAAGTGGAGGAGAATAA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCAAATCTGGACTGTACTaGTTTCACCAGCCTTTTTCA +
Preference number: 3 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCKSGLY*FHQPFS
Trigger: TGAAAAAGGCTGGTGAAACAAGTACAGTCCAGATTT...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATCTCTTAAATTTTCCTTaGGCAGTGGTGGTGATGGTG +
Preference number: 3 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYLLNFP*AVVVMV
Trigger: CACCATCACCACCACTGCCAAAGGAAAATTTAAGAG...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR CCA 72 bp ACCTCTGTTACTGATTTTCGAGTTCTGGTAGTCACCTaGATCACTGACACATTATTAGAAGGCTTTTTCTCT +
Preference number: 3 (lower is better)
Translates to: TSVTDFRVLVVT*ITDTLLEGFFS
Trigger: AGAGAAAAAGCCTTCTAATAATGTGTCAGTGATCCAGGTGACTACCAGAACTCGAAAATCAGTAACAGAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTCTGATAGACTGTCTATaGCTGGGGGAATTTTTCTTC +
Preference number: 3 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTLIDCL*LGEFFF
Trigger: GAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAG...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
3UTR-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTCATTTGCTCACAAACTaGCACACACTATTATTCTGC +
Preference number: 3 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTHLLTN*HTLLFC
Trigger: GCAGAATAATAGTGTGTGCAAGTTTGTGAGCAAATG...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
3UTR-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTAGCTCTACATGTTTTTaGAAGTTGCTTCTATCTGCT +
Preference number: 3 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFSSTCF*KLLLSA
Trigger: AGCAGATAGAAGCAACTTCAAAAAACATGTAGAGCT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR TCA 72 bp GTGAAACTGGTTCTTCAACTGTTGAATTTATACCAGTaGGATTCTCTCTTGTGTTCTGATCAGTGTCCATTT +
Preference number: 3 (lower is better)
Translates to: VKLVLQLLNLYQ*DSLLCSDQCPF
Trigger: AAATGGACACTGATCAGAACACAAGAGAGAATCTCACTGGTATAAATTCAACAGTTGAAGAACCAGTTTCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTAGCTCTACATGTTTTTaGAAGTTGCTTCTATCTGCT +
Preference number: 3 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTSSTCF*KLLLSA
Trigger: AGCAGATAGAAGCAACTTCAAAAAACATGTAGAGCT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR TCA 72 bp ATCACTTACAGTTCTCTTTATTGTAAAGTAGCCATATaGACACCAACCATCTATGAGAAAAGGTTCTCCTCA +
Preference number: 3 (lower is better)
Translates to: ITYSSLYCKVAI*TPTIYEKRFSS
Trigger: TGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGGCTACTTTACAATAAAGAGAACTGTAAGTGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGTTCGGCCTTCCTCGGTaGGGAGGGGCGGGCGACCCT +
Preference number: 4 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLFGLPR*GGAGDP
Trigger: AGGGTCGCCCGCCCCTCCTCACCGAGGAAGGCCGAA...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000514063.2
ENST00000616975.5
CDS-3UTR CCA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGATGCTCCATGGGAGGTaGCGGCTCCACCTGAACGGG +
Preference number: 4 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLMLHGR*RLHLNG
Trigger: CCCGTTCAGGTGGAGCCGCCACCTCCCATGGAGCAT...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGCTCTCTGGGAGGAGGTaGCTCCCTCTGAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLLSGRR*LPLSRL
Trigger: GAGCCTGCTCAGAGGGAGCCACCTCCTCCCAGAGAG...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGTCTGAGCATGCTCCATaGGAGGTGGCGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLSEHAP*EVAAPP
Trigger: AGGTGGAGCCGCCACCTCCCATGGAGCATGCTCAGA...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp AGGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCAGGGGCGGGCGACCCTaGGTCGCCGCTCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: REISQLGLQSWLPTSSLCRGGRP*VAAPSP
Trigger: CGGAGAAGGAGCGGCGACTCAGGGTCGCCCGCCCCT...GCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR TCA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGGGAGGCAGCTCCATGTaGGCAAGTACAATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLGGSSM*ASTIWA
Trigger: TGCCCAAATTGTACTTGCTCACATGGAGCTGCCTCC...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGTCCCTGGCTTTTGCCTaGTTCTCTGCACTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLSLAFA*FSALSS
Trigger: GGAAGAGAGTGCAGAGAAGCAGGCAAAAGCCAGGGA...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp AGGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCTTCGGCCTTCCTCGGTaGGGAGGGGCGGGCGACCCT +
Preference number: 4 (lower is better)
Translates to: REISQLGLQSWLPTSSLCFGLPR*GGAGDP
Trigger: AGGGTCGCCCGCCCCTCCTCACCGAGGAAGGCCGAA...GCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR GCA 90 bp AGGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCGCCCAGGAGTGGGGCTaGAGAGGGTGCTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: REISQLGLQSWLPTSSLCAQEWG*RGCSGL
Trigger: GAGGCCTGAGCACCCTCTGCAGCCCCACTCCTGGGC...GCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640168.2
CDS-3UTR GCA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGCTCCTGCCCTTGAGCTaGTTCTTCAAGATAGTACAC +
Preference number: 4 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLLLPLS*FFKIVH
Trigger: GTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAG...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGAGGGGCGGGCGACCCTaGGTCGCCGCTCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLRGGRP*VAAPSP
Trigger: CGGAGAAGGAGCGGCGACTCAGGGTCGCCCGCCCCT...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514063.2
ENST00000616975.5
CDS-3UTR TCA 90 bp GAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATATTCGGCCTTCCTCGGTaGGGAGGGGCGGGCGACCCT +
Preference number: 4 (lower is better)
Translates to: EISQLGLQSWLPTSSLCIFGLPR*GGAGDP
Trigger: AGGGTCGCCCGCCCCTCCTCACCGAGGAAGGCCGAA...TATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR TCA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGCCATACCCCACTGAATaGGTACGCATATGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLPYPTE*VRICLV
Trigger: AACTAGACATATGCGTACTCATTCAGTGGGGTATGG...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGATTGTGAACCTGTCTTaGATGGCGGGTTACTTCATG +
Preference number: 4 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLIVNLS*MAGYFM
Trigger: CATGAAGTAACCCGCCATGCAAGACAGGTTCACAAT...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp GGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCAGTGCTGGGGCCGTCGTaGACCAAGAAGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GKSVSLVYSRGFQHPPCAVLGPS*TKKAQE
Trigger: CTCCTGGGCCTTCTTGGTCCACGACGGCCCCAGCAC...TGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640168.2
CDS-3UTR CCA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGGGAGAGGAGGCTTTTTaGAAATTGGCTCCATGTGAA +
Preference number: 4 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLGEEAF*KLAPCE
Trigger: TTCACATGGAGCCAATTTCCAAAAAGCCTCCTCTCC...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGCGTGCCCTTTCACTCTaGATGTTAGACTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLRALSL*MLDFSF
Trigger: AAAGGAAAAGTCTAACATGCAGAGTGAAAGGGCACG...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp GAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATATCCAACACAGGACGCTaGGCCGCGCACCCAGTCCGC +
Preference number: 4 (lower is better)
Translates to: EISQLGLQSWLPTSSLCISNTGR*AAHPVR
Trigger: GCGGACTGGGTGCGCGGCGCAGCGTCCTGTGTTGGA...TATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640168.2
CDS-3UTR TCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGGCACCCACCATCTaGGCAGGCTCCACGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLWAPTI*AGSTGG
Trigger: GCCTCCCGTGGAGCCTGCTCAGATGGTGGGTGCCCA...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGTCTTCATCAATTTCCTaGGACTCATTTGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLSSSIS*DSFAAI
Trigger: AATGGCAGCAAATGAGTCTCAGGAAATTGATGAAGA...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGTACACATTAACCAAATaGCGATTGAGGTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLYTLTK*RLRCLL
Trigger: CAGCAAACACCTCAATCGCCATTTGGTTAATGTGTA...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTAGGGGCGGGCGACCCTaGGTCGCCGCTCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFRGGRP*VAAPSP
Trigger: CGGAGAAGGAGCGGCGACTCAGGGTCGCCCGCCCCT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000638187.2
CDS-3UTR TCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTAGGGGCGGGCGACCCTaGGTCGCCGCTCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHIRGGRP*VAAPSP
Trigger: CGGAGAAGGAGCGGCGACTCAGGGTCGCCCGCCCCT...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514063.2
ENST00000616975.5
CDS-3UTR TCA 90 bp GGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCAGCCAGCATAATAAGCTaGGGTGCGGCCAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GKSVSLVYSRGFQHPPCAASIIS*GAASSA
Trigger: AGCTGAACTGGCCGCACCTCAGCTTATTATGCTGGC...TGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR GCA 90 bp GAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATAGGTGGTAAAGTTGGGTaGTGGGGCCGTCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: EISQLGLQSWLPTSSLCIGGKVG*WGRRGP
Trigger: TGGTCCACGACGGCCCCAGCACCCAACTTTACCACC...TATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640168.2
3UTR CAA 72 bp GCTGCCATTGTAGCAGGAGGTGATGCCAGTGCAGTTTaGGACACTGCTTCACGTTCTTCTACTGCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: AAIVAGGDASAV*DTASRSSTAEG
Trigger: CCCTTCAGCAGTAGAAGAACGTGAAGCAGTGTCCAAAACTGCACTGGCATCACCTCCTGCTACAATGGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTAGGGGCGGGCGACCCTaGGTCGCCGCTCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTRGGRP*VAAPSP
Trigger: CGGAGAAGGAGCGGCGACTCAGGGTCGCCCGCCCCT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000638187.2
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTTCGGCCTTCCTCGGTaGGGAGGGGCGGGCGACCCT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFFGLPR*GGAGDP
Trigger: AGGGTCGCCCGCCCCTCCTCACCGAGGAAGGCCGAA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
52% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000638187.2
CDS-3UTR TCA 90 bp AGGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCGCCTCAAATACAGGCTaGGGTTCTACGACGCTGAGT +
Preference number: 4 (lower is better)
Translates to: REISQLGLQSWLPTSSLCASNTG*GSTTLS
Trigger: ACTCAGCGTCGTAGAACCTCAGCCTGTATTTGAGGC...GCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGCTGCCACCAGCGCCTaGCTCGGCGGCGGCATTCCT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFAATSA*LGGGIP
Trigger: AGGAATGCCGCCGCCGAGGCAGGCGCTGGTGGCAGC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR CCA 90 bp GAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATAGGTAAAGTTGGGTGCTaGGGCCGTCGTGGACCAAGA +
Preference number: 4 (lower is better)
Translates to: EISQLGLQSWLPTSSLCIGKVGC*GRRGPR
Trigger: TCTTGGTCCACGACGGCCCCAGCACCCAACTTTACC...TATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640168.2
CDS-3UTR CCA 90 bp AGGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCTGCATATCACCTCCTTaGACAGGGCAGACGCTCTGT +
Preference number: 4 (lower is better)
Translates to: REISQLGLQSWLPTSSLCCISPP*TGQTLC
Trigger: ACAGAGCGTCTGCCCTGTCCAAGGAGGTGATATGCA...GCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640168.2
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTTCGGCCTTCCTCGGTaGGGAGGGGCGGGCGACCCT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTFGLPR*GGAGDP
Trigger: AGGGTCGCCCGCCCCTCCTCACCGAGGAAGGCCGAA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000638187.2
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTGGGCACCCACCATCTaGGCAGGCTCCACGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFWAPTI*AGSTGG
Trigger: GCCTCCCGTGGAGCCTGCTCAGATGGTGGGTGCCCA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp GGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATTCCCTGGCTTTTGCCTaGTTCTCTGCACTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GNQSAWFTVVASNILPVHSLAFA*FSALSS
Trigger: GGAAGAGAGTGCAGAGAAGCAGGCAAAAGCCAGGGA...ATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR GCA 90 bp GGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCACCAACATCCTCCCTGTaGATATCACCTCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: GKSVSLVYSRGFQHPPCAPTSSL*ISPPWT
Trigger: TGTCCAAGGAGGTGATATGCACAGGGAGGATGTTGG...TGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR CCA 90 bp AGGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCGACTGCCCCATTACCTaGGTGGCCATAACTGTATTC +
Preference number: 4 (lower is better)
Translates to: REISQLGLQSWLPTSSLCDCPIT*VAITVF
Trigger: GAATACAGTTATGGCCACCCAGGTAATGGGGCAGTC...GCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR CCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTTCTGAGCATGCTCCATaGGAGGTGGCGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCSEHAP*EVAAPP
Trigger: AGGTGGAGCCGCCACCTCCCATGGAGCATGCTCAGA...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp AGGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCCTTGGTTTACAGTCGTaGCTTCCAACATCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: REISQLGLQSWLPTSSLCLGLQS*LPTSSL
Trigger: CAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAG...GCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR TCA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTGCCAGCATAATAAGCTaGGGTGCGGCCAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSASIIS*GAASSA
Trigger: AGCTGAACTGGCCGCACCTCAGCTTATTATGCTGGC...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp AGGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCGAGGTTCTACGACGCTaGGTTCCAAACTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: REISQLGLQSWLPTSSLCEVLRR*VPNFSV
Trigger: AACTGAGAAGTTTGGAACTCAGCGTCGTAGAACCTC...GCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR TCA 90 bp GAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATAGCCTCAAATACAGGCTaGGGTTCTACGACGCTGAGT +
Preference number: 4 (lower is better)
Translates to: EISQLGLQSWLPTSSLCIASNTG*GSTTLS
Trigger: ACTCAGCGTCGTAGAACCTCAGCCTGTATTTGAGGC...TATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR TCA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTGGTTTAGGCCCATTGTaGACCTGTCTTGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSGLGPL*TCLAWR
Trigger: CCGCCATGCAAGACAGGTTCACAATGGGCCTAAACC...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp GGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCAGGCAGACGCTCTGAATaGGTACGCATATGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: GKSVSLVYSRGFQHPPCAGRRSE*VRICLV
Trigger: AACTAGACATATGCGTACTCATTCAGAGCGTCTGCC...TGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640343.2
CDS-3UTR GCA 90 bp GAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATATCCCTGGCTTTTGCCTaGTTCTCTGCACTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: EISQLGLQSWLPTSSLCISLAFA*FSALSS
Trigger: GGAAGAGAGTGCAGAGAAGCAGGCAAAAGCCAGGGA...TATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGTGCTGGGGCCGTCGTaGACCAAGAAGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFVLGPS*TKKAQE
Trigger: CTCCTGGGCCTTCTTGGTCCACGACGGCCCCAGCAC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000309042.12
CDS-3UTR CCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTCTGGACCACCTGCATaGGAGCAGATTCTACCTGGG +
Preference number: 4 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLSGPPA*EQILPG
Trigger: CCCAGGTAGAATCTGCTCCCATGCAGGTGGTCCAGA...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp AGGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCGGAAATCAGTCAGCTTaGTTTACAGTCGTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: REISQLGLQSWLPTSSLCGNQSA*FTVVAS
Trigger: GGAAGCCACGACTGTAAACCAAGCTGACTGATTTCC...GCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR TCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGCCAGCATAATAAGCTaGGGTGCGGCCAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCASIIS*GAASSA
Trigger: AGCTGAACTGGCCGCACCTCAGCTTATTATGCTGGC...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp GGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATGAGGTTCTACGACGCTaGGTTCCAAACTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: GNQSAWFTVVASNILPVHEVLRR*VPNFSV
Trigger: AACTGAGAAGTTTGGAACTCAGCGTCGTAGAACCTC...ATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTGGGCACCCACCATCTaGGCAGGCTCCACGGGAGGC +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCWAPTI*AGSTGG
Trigger: GCCTCCCGTGGAGCCTGCTCAGATGGTGGGTGCCCA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGAAATTGGCTCCATGTaGAGGGGAGGCTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCEIGSM*RGGSLG
Trigger: TCCCAGAGAGCCTCCCCTTCACATGGAGCCAATTTC...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGCCCAGGAGTGGGGCTaGAGAGGGTGCTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCAQEWG*RGCSGL
Trigger: GAGGCCTGAGCACCCTCTGCAGCCCCACTCCTGGGC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000309042.12
CDS-3UTR GCA 90 bp GAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATACCAACATCCTCCCTGTaGATATCACCTCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: EISQLGLQSWLPTSSLCIPTSSL*ISPPWT
Trigger: TGTCCAAGGAGGTGATATGCACAGGGAGGATGTTGG...TATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR CCA 90 bp GAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATAGACTGCCCCATTACCTaGGTGGCCATAACTGTATTC +
Preference number: 4 (lower is better)
Translates to: EISQLGLQSWLPTSSLCIDCPIT*VAITVF
Trigger: GAATACAGTTATGGCCACCCAGGTAATGGGGCAGTC...TATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTATGCTCCATGGGAGGTaGCGGCTCCACCTGAACGGG +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFMLHGR*RLHLNG
Trigger: CCCGTTCAGGTGGAGCCGCCACCTCCCATGGAGCAT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTCTCTGGGAGGAGGTaGCTCCCTCTGAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFLSGRR*LPLSRL
Trigger: GAGCCTGCTCAGAGGGAGCCACCTCCTCCCAGAGAG...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGAGATTCTTGTGGAACTaGCCGAGCCCCATGCAATCC +
Preference number: 4 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLRFLWN*PSPMQS
Trigger: GGATTGCATGGGGCTCGGCCAGTTCCACAAGAATCT...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp GAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATACTTGGTTTACAGTCGTaGCTTCCAACATCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: EISQLGLQSWLPTSSLCILGLQS*LPTSSL
Trigger: CAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAG...TATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR TCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGCCTCAAATACAGGCTaGGGTTCTACGACGCTGAGT +
Preference number: 4 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCASNTG*GSTTLS
Trigger: ACTCAGCGTCGTAGAACCTCAGCCTGTATTTGAGGC...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp GAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATAAATATCTGGAGCACCTaGTGCCTCAAATACAGGCTG +
Preference number: 4 (lower is better)
Translates to: EISQLGLQSWLPTSSLCINIWST*CLKYRL
Trigger: CAGCCTGTATTTGAGGCATCAGGTGCTCCAGATATT...TATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTAGGCTGTCCCGGGGCTaGACAGCCCAAGCTATTGGG +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTRLSRG*TAQAIG
Trigger: CCCAATAGCTTGGGCTGTTCAGCCCCGGGACAGCCT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGGTGGTAAAGTTGGGTaGTGGGGCCGTCGTGGACCA +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFGGKVG*WGRRGP
Trigger: TGGTCCACGACGGCCCCAGCACCCAACTTTACCACC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000309042.12
CDS-3UTR GCA 90 bp GAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATACATAATAAGCTGAGGTaGGGCCAGTTCAGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: EISQLGLQSWLPTSSLCIHNKLR*GQFSFG
Trigger: TCCAAAGCTGAACTGGCCGCACCTCAGCTTATTATG...TATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR GCA 90 bp TTAAGGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGCATAATAAGCTGAGGTaGGGCCAGTTCAGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: LREISQLGLQSWLPTSSLHNKLR*GQFSFG
Trigger: TCCAAAGCTGAACTGGCCGCACCTCAGCTTATTATG...CAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640343.2
CDS-3UTR GCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGACTGGCCGAGCCCCATaGAATCCAGAATCATCACTA +
Preference number: 4 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLTGRAP*NPESSL
Trigger: TAGTGATGATTCTGGATTGCATGGGGCTCGGCCAGT...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTATTCCTCCGTGCTGCTaGCACCAGCGCCTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCIPPCC*HQRLPR
Trigger: CCGAGGCAGGCGCTGGTGGCAGCAGCACGGAGGAAT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGCACGAATTCCTCCGTaGTGCTGCCACCAGCGCCTG +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTARIPP*CCHQRL
Trigger: CAGGCGCTGGTGGCAGCAGCACGGAGGAATTCGTGC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTCTGAGCATGCTCCATaGGAGGTGGCGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFSEHAP*EVAAPP
Trigger: AGGTGGAGCCGCCACCTCCCATGGAGCATGCTCAGA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCTCTGAGCAGGTTCCATaGGAGCAGGCCCCATTTGGG +
Preference number: 4 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCSEQVP*EQAPFG
Trigger: CCCAAATGGGGCCTGCTCCCATGGAACCTGCTCAGA...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATCTCTCTGGGAGGAGGTaGCTCCCTCTGAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYLSGRR*LPLSRL
Trigger: GAGCCTGCTCAGAGGGAGCCACCTCCTCCCAGAGAG...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTTCTGCTAGATTCTTGTaGAACTGGCCGAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCSARFL*NWPSPM
Trigger: CATGGGGCTCGGCCAGTTCCACAAGAATCTAGCAGA...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGGAGGTTCTACGACGCTaGGTTCCAAACTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLEVLRR*VPNFSV
Trigger: AACTGAGAAGTTTGGAACTCAGCGTCGTAGAACCTC...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGAATATCTGGAGCACCTaGTGCCTCAAATACAGGCTG +
Preference number: 4 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLNIWST*CLKYRL
Trigger: CAGCCTGTATTTGAGGCATCAGGTGCTCCAGATATT...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp GAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATAAAATGTTTCCTCCAGTaGTACTCGCTCACTGTTGTG +
Preference number: 4 (lower is better)
Translates to: EISQLGLQSWLPTSSLCIKCFLQ*YSLTVV
Trigger: CACAACAGTGAGCGAGTATCACTGGAGGAAACATTT...TATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR TCA 90 bp TTAAGGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGAAATGTTTCCTCCAGTaGTACTCGCTCACTGTTGTG +
Preference number: 4 (lower is better)
Translates to: LREISQLGLQSWLPTSSLKCFLQ*YSLTVV
Trigger: CACAACAGTGAGCGAGTATCACTGGAGGAAACATTT...CAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640343.2
CDS-3UTR TCA 90 bp GGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCAAGTCTTCTGAGAACTTaGGTAAGGACAAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: GKSVSLVYSRGFQHPPCASLLRT*VRTKFT
Trigger: TGTGAACTTTGTCCTTACTCAAGTTCTCAGAAGACT...TGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640343.2
CDS-3UTR TCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTCACATACAGGGCAATTaGACTGCCGTGGGTTCACAT +
Preference number: 4 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCHIQGN*TAVGSH
Trigger: ATGTGAACCCACGGCAGTTCAATTGCCCTGTATGTG...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTCAACAGGTTCCTTCTaGGGAGGCTTACTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLSTGSF*GGLLLF
Trigger: GAAAAGCAGTAAGCCTCCTCAGAAGGAACCTGTTGA...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTAGGGGGAAGCATTGGTaGAACTGGTTCTTCAACTGT +
Preference number: 4 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSRGKHW*NWFFNC
Trigger: ACAGTTGAAGAACCAGTTTCACCAATGCTTCCCCCT...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGACTTGCTCCTTCCGTaGCCTTTCACTCTGCATGTT +
Preference number: 4 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCDLLLP*PFTLHV
Trigger: AACATGCAGAGTGAAAGGGCACGGAAGGAGCAAGTC...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTACTGGCCGAGCCCCATaGAATCCAGAATCATCACTA +
Preference number: 4 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCTGRAP*NPESSL
Trigger: TAGTGATGATTCTGGATTGCATGGGGCTCGGCCAGT...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTCGAATTCCTCCGTGCTaGTGCCACCAGCGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCRIPPC*CHQRLP
Trigger: AGGCAGGCGCTGGTGGCAGCAGCACGGAGGAATTCG...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTATGCTCCATGGGAGGTaGCGGCTCCACCTGAACGGG +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCMLHGR*RLHLNG
Trigger: CCCGTTCAGGTGGAGCCGCCACCTCCCATGGAGCAT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTCTGAGCATGCTCCATaGGAGGTGGCGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTSEHAP*EVAAPP
Trigger: AGGTGGAGCCGCCACCTCCCATGGAGCATGCTCAGA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTCTGAGCAGGTTCCATaGGAGCAGGCCCCATTTGGG +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFSEQVP*EQAPFG
Trigger: CCCAAATGGGGCCTGCTCCCATGGAACCTGCTCAGA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTTCTGAGCAGGTTCCATaGGAGCAGGCCCCATTTGGG +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHISEQVP*EQAPFG
Trigger: CCCAAATGGGGCCTGCTCCCATGGAACCTGCTCAGA...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTCTCTCTGGGAGGAGGTaGCTCCCTCTGAGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCLSGRR*LPLSRL
Trigger: GAGCCTGCTCAGAGGGAGCCACCTCCTCCCAGAGAG...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTAGGTCACTTCCTTCATaGCTGTGGATGCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSRSLPS*LWMPSS
Trigger: AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCT...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR CAA 72 bp CCATGCAATCCAGAATCATCACTACCCTCTGACATGTaGTCACTTAGGTCACTTCCTTCATGGCTGTGGATG +
Preference number: 4 (lower is better)
Translates to: PCNPESSLPSDM*SLRSLPSWLWM
Trigger: CATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTCTGGATTGCATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTGCCAGCATAATAAGCTaGGGTGCGGCCAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHIASIIS*GAASSA
Trigger: AGCTGAACTGGCCGCACCTCAGCTTATTATGCTGGC...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGCCAGCATAATAAGCTaGGGTGCGGCCAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFASIIS*GAASSA
Trigger: AGCTGAACTGGCCGCACCTCAGCTTATTATGCTGGC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCGCCTCAAATACAGGCTaGGGTTCTACGACGCTGAGT +
Preference number: 4 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCASNTG*GSTTLS
Trigger: ACTCAGCGTCGTAGAACCTCAGCCTGTATTTGAGGC...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp TCCTTTCTTAAGGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCAATATCTGGAGCACCTaGTGCCTCAAATACAGGCTG +
Preference number: 4 (lower is better)
Translates to: SFLKGNQSAWFTVVASNINIWST*CLKYRL
Trigger: CAGCCTGTATTTGAGGCATCAGGTGCTCCAGATATT...GATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCCTTAAGAAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640343.2
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGGTTTAGGCCCATTGTaGACCTGTCTTGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFGLGPL*TCLAWR
Trigger: CCGCCATGCAAGACAGGTTCACAATGGGCCTAAACC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGGAGGCAGCTCCATGTaGGCAAGTACAATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKIGGSSM*ASTIWA
Trigger: TGCCCAAATTGTACTTGCTCACATGGAGCTGCCTCC...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGAAATTGGCTCCATGTaGAGGGGAGGCTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFEIGSM*RGGSLG
Trigger: TCCCAGAGAGCCTCCCCTTCACATGGAGCCAATTTC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp AGCTGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTTCCCTGGCTTTTGCCTaGTTCTCTGCACTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SCFFKIVHINQMAIEVFASLAFA*FSALSS
Trigger: GGAAGAGAGTGCAGAGAAGCAGGCAAAAGCCAGGGA...AGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCTCCCTGGCTTTTGCCTaGTTCTCTGCACTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCSLAFA*FSALSS
Trigger: GGAAGAGAGTGCAGAGAAGCAGGCAAAAGCCAGGGA...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTATTGTGAACCTGTCTTaGATGGCGGGTTACTTCATG +
Preference number: 4 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSIVNLS*MAGYFM
Trigger: CATGAAGTAACCCGCCATGCAAGACAGGTTCACAAT...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGACACTTCTTGGAAGCTaGATAGTCACATACAGGGCA +
Preference number: 4 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLTLLGS*IVTYRA
Trigger: TGCCCTGTATGTGACTATGCAGCTTCCAAGAAGTGT...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTCTCCTGCCCTTGAGCTaGTTCTTCAAGATAGTACAC +
Preference number: 4 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCLLPLS*FFKIVH
Trigger: GTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAG...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCCTCGGCCCGCTCACTaGACACATTTACACACCAAC +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFPRPAH*THLHTN
Trigger: GTTGGTGTGTAAATGTGTGCAGTGAGCGGGCCGAGG...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCACAAAGCAGCTCTTTaGAAACTCGGGCGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFHKAAL*KLGRSR
Trigger: GCGAGAGCGCCCGAGTTTGCAAAGAGCTGCTTTGTG...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTCCCGAAAGCCCAACGTaGTGCACGAATTCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTPESPT*CTNSSV
Trigger: CACGGAGGAATTCGTGCAGCACGTTGGGCTTTCGGG...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR CCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGGTAAAGTTGGGTGCTaGGGCCGTCGTGGACCAAGA +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTGKVGC*GRRGPR
Trigger: TCTTGGTCCACGACGGCCCCAGCACCCAACTTTACC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000309042.12
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTCTGAGCATGCTCCATaGGAGGTGGCGGCTCCACCT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCSEHAP*EVAAPP
Trigger: AGGTGGAGCCGCCACCTCCCATGGAGCATGCTCAGA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTCTGGACCACCTGCATaGGAGCAGATTCTACCTGGG +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFSGPPA*EQILPG
Trigger: CCCAGGTAGAATCTGCTCCCATGCAGGTGGTCCAGA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGCTTCCTTCATGGCTGTaGATGCCTTCATCTTCATCA +
Preference number: 4 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLLPSWL*MPSSSS
Trigger: TGATGAAGATGAAGGCATCCACAGCCATGAAGGAAG...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp AGCTGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTAGATTCTTGTGGAACTaGCCGAGCCCCATGCAATCC +
Preference number: 4 (lower is better)
Translates to: SCFFKIVHINQMAIEVFARFLWN*PSPMQS
Trigger: GGATTGCATGGGGCTCGGCCAGTTCCACAAGAATCT...AGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGCCAGCATAATAAGCTaGGGTGCGGCCAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTASIIS*GAASSA
Trigger: AGCTGAACTGGCCGCACCTCAGCTTATTATGCTGGC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGCCTCAAATACAGGCTaGGGTTCTACGACGCTGAGT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFASNTG*GSTTLS
Trigger: ACTCAGCGTCGTAGAACCTCAGCCTGTATTTGAGGC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGGTTTAGGCCCATTGTaGACCTGTCTTGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTGLGPL*TCLAWR
Trigger: CCGCCATGCAAGACAGGTTCACAATGGGCCTAAACC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGGAGGCAGCTCCATGTaGGCAAGTACAATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFGGSSM*ASTIWA
Trigger: TGCCCAAATTGTACTTGCTCACATGGAGCTGCCTCC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATGAAATTGGCTCCATGTaGAGGGGAGGCTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYEIGSM*RGGSLG
Trigger: TCCCAGAGAGCCTCCCCTTCACATGGAGCCAATTTC...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCGAAATTGGCTCCATGTaGAGGGGAGGCTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: FFKIVHINQMAIEVFAVIEIGSM*RGGSLG
Trigger: TCCCAGAGAGCCTCCCCTTCACATGGAGCCAATTTC...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGAAATTGGCTCCATGTaGAGGGGAGGCTCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTEIGSM*RGGSLG
Trigger: TCCCAGAGAGCCTCCCCTTCACATGGAGCCAATTTC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTTGTACTGCCAAATCTaGAACCTGCCTCAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLLYCQI*NLPQRD
Trigger: ATCTCTTTGAGGCAGGTTTCAGATTTGGCAGTACAA...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTTCCCTGGCTTTTGCCTaGTTCTCTGCACTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHISLAFA*FSALSS
Trigger: GGAAGAGAGTGCAGAGAAGCAGGCAAAAGCCAGGGA...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTACACTTCTTGGAAGCTaGATAGTCACATACAGGGCA +
Preference number: 4 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCTLLGS*IVTYRA
Trigger: TGCCCTGTATGTGACTATGCAGCTTCCAAGAAGTGT...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTTATTCTCCTCCACTTTaGTGTCACCCTTTGGCACTT +
Preference number: 4 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCYSPPL*CHPLAL
Trigger: AAGTGCCAAAGGGTGACAGCAAAGTGGAGGAGAATA...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTACTTCAATAAGGACTTaGTCCTTCCGTGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCTSIRT*SFRALS
Trigger: TGAAAGGGCACGGAAGGAGCAAGTCCTTATTGAAGT...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAACTGGCCGAGCCCCATaGAATCCAGAATCATCACTA +
Preference number: 4 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKITGRAP*NPESSL
Trigger: TAGTGATGATTCTGGATTGCATGGGGCTCGGCCAGT...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGAAAGCCCAACGTGCTaGACGAATTCCTCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTESPTC*TNSSVL
Trigger: CAGCACGGAGGAATTCGTGCAGCACGTTGGGCTTTC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR CCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGACCATGTAAAGAATaGCTGTCAACTTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCGPCKE*LSTSSF
Trigger: GAAGCTGGAAGTTGACAGCCATTCTTTACATGGTCC...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTCTGAGCAGGTTCCATaGGAGCAGGCCCCATTTGGG +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCSEQVP*EQAPFG
Trigger: CCCAAATGGGGCCTGCTCCCATGGAACCTGCTCAGA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATTCTGGACCACCTGCATaGGAGCAGATTCTACCTGGG +
Preference number: 4 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYSGPPA*EQILPG
Trigger: CCCAGGTAGAATCTGCTCCCATGCAGGTGGTCCAGA...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTCTGGACCACCTGCATaGGAGCAGATTCTACCTGGG +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTSGPPA*EQILPG
Trigger: CCCAGGTAGAATCTGCTCCCATGCAGGTGGTCCAGA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTATCTGAACCACCCCCATaGGAGGAGACAACTCCATCT +
Preference number: 4 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVSEPPP*EETTPS
Trigger: AGATGGAGTTGTCTCCTCCCATGGGGGTGGTTCAGA...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTTCTGAACCACCCCCATaGGAGGAGACAACTCCATCT +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHISEPPP*EETTPS
Trigger: AGATGGAGTTGTCTCCTCCCATGGGGGTGGTTCAGA...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTCTGAACCACCCCCATaGGAGGAGACAACTCCATCT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFSEPPP*EETTPS
Trigger: AGATGGAGTTGTCTCCTCCCATGGGGGTGGTTCAGA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTAGATTCTTGTGGAACTaGCCGAGCCCCATGCAATCC +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFRFLWN*PSPMQS
Trigger: GGATTGCATGGGGCTCGGCCAGTTCCACAAGAATCT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTCTGCTAGATTCTTGTaGAACTGGCCGAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFSARFL*NWPSPM
Trigger: CATGGGGCTCGGCCAGTTCCACAAGAATCTAGCAGA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTTCTGCTAGATTCTTGTaGAACTGGCCGAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHISARFL*NWPSPM
Trigger: CATGGGGCTCGGCCAGTTCCACAAGAATCTAGCAGA...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGCCAGCATAATAAGCTaGGGTGCGGCCAGTTCAGCT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCASIIS*GAASSA
Trigger: AGCTGAACTGGCCGCACCTCAGCTTATTATGCTGGC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCGAGGTTCTACGACGCTaGGTTCCAAACTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCEVLRR*VPNFSV
Trigger: AACTGAGAAGTTTGGAACTCAGCGTCGTAGAACCTC...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCGCCTCAAATACAGGCTaGGGTTCTACGACGCTGAGT +
Preference number: 4 (lower is better)
Translates to: FFKIVHINQMAIEVFAVIASNTG*GSTTLS
Trigger: ACTCAGCGTCGTAGAACCTCAGCCTGTATTTGAGGC...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGCCTCAAATACAGGCTaGGGTTCTACGACGCTGAGT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTASNTG*GSTTLS
Trigger: ACTCAGCGTCGTAGAACCTCAGCCTGTATTTGAGGC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp AGCTGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTAATATCTGGAGCACCTaGTGCCTCAAATACAGGCTG +
Preference number: 4 (lower is better)
Translates to: SCFFKIVHINQMAIEVFANIWST*CLKYRL
Trigger: CAGCCTGTATTTGAGGCATCAGGTGCTCCAGATATT...AGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGAGTCTTCTGAGAACTTaGGTAAGGACAAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLSLLRT*VRTKFT
Trigger: TGTGAACTTTGTCCTTACTCAAGTTCTCAGAAGACT...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGGTTTAGGCCCATTGTaGACCTGTCTTGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCGLGPL*TCLAWR
Trigger: CCGCCATGCAAGACAGGTTCACAATGGGCCTAAACC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTTTTCACCTCTGTTACTaGTTTTCGAGTTCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSFHLCY*FSSSGS
Trigger: ACTACCAGAACTCGAAAATCAGTAACAGAGGTGAAA...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTCCCTTTGGCACTTCCTaGCTATTATTTTTGGATTTG +
Preference number: 4 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSPFGTS*LLFLDL
Trigger: CAAATCCAAAAATAATAGTCAGGAAGTGCCAAAGGG...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGGAGGCAGCTCCATGTaGGCAAGTACAATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTGGSSM*ASTIWA
Trigger: TGCCCAAATTGTACTTGCTCACATGGAGCTGCCTCC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAAGGGGGAAGCATTGGTaGAACTGGTTCTTCAACTGT +
Preference number: 4 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKIRGKHW*NWFFNC
Trigger: ACAGTTGAAGAACCAGTTTCACCAATGCTTCCCCCT...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTACATTGTAGCAGGAGGTaGTGCCAGTGCAGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVHCSRR*CQCSFG
Trigger: TCCAAAACTGCACTGGCATCACCTCCTGCTACAATG...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTCATTGTAGCAGGAGGTaGTGCCAGTGCAGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHIHCSRR*CQCSFG
Trigger: TCCAAAACTGCACTGGCATCACCTCCTGCTACAATG...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCATTGTAGCAGGAGGTaGTGCCAGTGCAGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFHCSRR*CQCSFG
Trigger: TCCAAAACTGCACTGGCATCACCTCCTGCTACAATG...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATACATAATAAGCTGAGGTaGGGCCAGTTCAGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKIHNKLR*GQFSFG
Trigger: TCCAAAGCTGAACTGGCCGCACCTCAGCTTATTATG...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp AGCTGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTCATAATAAGCTGAGGTaGGGCCAGTTCAGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: SCFFKIVHINQMAIEVFAHNKLR*GQFSFG
Trigger: TCCAAAGCTGAACTGGCCGCACCTCAGCTTATTATG...AGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTCCCTGGCTTTTGCCTaGTTCTCTGCACTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTSLAFA*FSALSS
Trigger: GGAAGAGAGTGCAGAGAAGCAGGCAAAAGCCAGGGA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
CDS-3UTR GCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTACAGGGCAATTGAACTaGCGTGGGTTCACATGTAGC +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHITGQLN*RGFTCS
Trigger: GCTACATGTGAACCCACGGCAGTTCAATTGCCCTGT...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGACTTGCTCCTTCCGTaGCCTTTCACTCTGCATGTT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFDLLLP*PFTLHV
Trigger: AACATGCAGAGTGAAAGGGCACGGAAGGAGCAAGTC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTACTGGCCGAGCCCCATaGAATCCAGAATCATCACTA +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFTGRAP*NPESSL
Trigger: TAGTGATGATTCTGGATTGCATGGGGCTCGGCCAGT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGACTGCCCCATTACCTaGGTGGCCATAACTGTATTC +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFDCPIT*VAITVF
Trigger: GAATACAGTTATGGCCACCCAGGTAATGGGGCAGTC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAGACTGCCCCATTACCTaGGTGGCCATAACTGTATTC +
Preference number: 4 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVDCPIT*VAITVF
Trigger: GAATACAGTTATGGCCACCCAGGTAATGGGGCAGTC...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGGTTCTGGTAGTCACCTaGATCACTGACACATTATTA +
Preference number: 4 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLVLVVT*ITDTLL
Trigger: TAATAATGTGTCAGTGATCCAGGTGACTACCAGAAC...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTCTGGACCACCTGCATaGGAGCAGATTCTACCTGGG +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCSGPPA*EQILPG
Trigger: CCCAGGTAGAATCTGCTCCCATGCAGGTGGTCCAGA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTCTGAACCACCCCCATaGGAGGAGACAACTCCATCT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTSEPPP*EETTPS
Trigger: AGATGGAGTTGTCTCCTCCCATGGGGGTGGTTCAGA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCTCTGAACCACCCCCATaGGAGGAGACAACTCCATCT +
Preference number: 4 (lower is better)
Translates to: FFKIVHINQMAIEVFAVISEPPP*EETTPS
Trigger: AGATGGAGTTGTCTCCTCCCATGGGGGTGGTTCAGA...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTCTGCTAGATTCTTGTaGAACTGGCCGAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTSARFL*NWPSPM
Trigger: CATGGGGCTCGGCCAGTTCCACAAGAATCTAGCAGA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
3UTR CAA 72 bp ATTGTGAACCTGTCTTGCATGGCGGGTTACTTCATGTaGATTAGAGGCCACATAACTGCACTGATCACATTT +
Preference number: 4 (lower is better)
Translates to: IVNLSCMAGYFM*IRGHITALITF
Trigger: AAATGTGATCAGTGCAGTTATGTGGCCTCTAATCAACATGAAGTAACCCGCCATGCAAGACAGGTTCACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
3UTR CAA 72 bp CTGCTTCACGTTCTTCTACTGCTGAAGGGGGAAGCATaGGTGAAACTGGTTCTTCAACTGTTGAATTTATAC +
Preference number: 4 (lower is better)
Translates to: LLHVLLLLKGEA*VKLVLQLLNLY
Trigger: GTATAAATTCAACAGTTGAAGAACCAGTTTCACCAATGCTTCCCCCTTCAGCAGTAGAAGAACGTGAAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAGAGGTTCTACGACGCTaGGTTCCAAACTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVEVLRR*VPNFSV
Trigger: AACTGAGAAGTTTGGAACTCAGCGTCGTAGAACCTC...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGCCTCAAATACAGGCTaGGGTTCTACGACGCTGAGT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCASNTG*GSTTLS
Trigger: ACTCAGCGTCGTAGAACCTCAGCCTGTATTTGAGGC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAAATATCTGGAGCACCTaGTGCCTCAAATACAGGCTG +
Preference number: 4 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVNIWST*CLKYRL
Trigger: CAGCCTGTATTTGAGGCATCAGGTGCTCCAGATATT...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTAATATCTGGAGCACCTaGTGCCTCAAATACAGGCTG +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFNIWST*CLKYRL
Trigger: CAGCCTGTATTTGAGGCATCAGGTGCTCCAGATATT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp AGCTGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTAAATGTTTCCTCCAGTaGTACTCGCTCACTGTTGTG +
Preference number: 4 (lower is better)
Translates to: SCFFKIVHINQMAIEVFAKCFLQ*YSLTVV
Trigger: CACAACAGTGAGCGAGTATCACTGGAGGAAACATTT...AGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTCACATACAGGGCAATTaGACTGCCGTGGGTTCACAT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTHIQGN*TAVGSH
Trigger: ATGTGAACCCACGGCAGTTCAATTGCCCTGTATGTG...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTCAACAGGTTCCTTCTaGGGAGGCTTACTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFSTGSF*GGLLLF
Trigger: GAAAAGCAGTAAGCCTCCTCAGAAGGAACCTGTTGA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGGAGGCAGCTCCATGTaGGCAAGTACAATTTGGGCA +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCGGSSM*ASTIWA
Trigger: TGCCCAAATTGTACTTGCTCACATGGAGCTGCCTCC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTAGGGGGAAGCATTGGTaGAACTGGTTCTTCAACTGT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFRGKHW*NWFFNC
Trigger: ACAGTTGAAGAACCAGTTTCACCAATGCTTCCCCCT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTTGTAAAGTAGCCATATaGACACCAACCATCTATGAG +
Preference number: 4 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCCKVAI*TPTIYE
Trigger: CTCATAGATGGTTGGTGTTCATATGGCTACTTTACA...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp AGCTGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTCCATACCCCACTGAATaGGTACGCATATGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: SCFFKIVHINQMAIEVFAPYPTE*VRICLV
Trigger: AACTAGACATATGCGTACTCATTCAGTGGGGTATGG...AGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGGCGGCATTCCTAACTaGAATAGGCATTCGGCCATT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTGGIPN*NRHSAI
Trigger: AATGGCCGAATGCCTATTTCAGTTAGGAATGCCGCC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR GCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTCATAATAAGCTGAGGTaGGGCCAGTTCAGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHIHNKLR*GQFSFG
Trigger: TCCAAAGCTGAACTGGCCGCACCTCAGCTTATTATG...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTCCCTGGCTTTTGCCTaGTTCTCTGCACTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCSLAFA*FSALSS
Trigger: GGAAGAGAGTGCAGAGAAGCAGGCAAAAGCCAGGGA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
CDS-3UTR GCA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTGAAGTTGCTTCTATCTaGTGTTTTGTAATCACAGTG +
Preference number: 4 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSEVASI*CFVITV
Trigger: CACTGTGATTACAAAACAGCAGATAGAAGCAACTTC...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTACAGGGCAATTGAACTaGCGTGGGTTCACATGTAGC +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTTGQLN*RGFTCS
Trigger: GCTACATGTGAACCCACGGCAGTTCAATTGCCCTGT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGACTTGCTCCTTCCGTaGCCTTTCACTCTGCATGTT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTDLLLP*PFTLHV
Trigger: AACATGCAGAGTGAAAGGGCACGGAAGGAGCAAGTC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTCCTGCCCTTGAGCTaGTTCTTCAAGATAGTACAC +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFLLPLS*FFKIVH
Trigger: GTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAG...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTACTCCTGCCCTTGAGCTaGTTCTTCAAGATAGTACAC +
Preference number: 4 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVLLPLS*FFKIVH
Trigger: GTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAG...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGAGGTTGCAGTGAGCTaGGATCACACCATTTTATTC +
Preference number: 4 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKIEVAVS*DHTILF
Trigger: GAATAAAATGGTGTGATCGCAGCTCACTGCAACCTC...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611211.2
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTACTTTTCTTTGTTGCTaGAGTTTCGGGGGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFTFLCC*SFGGEV
Trigger: CACCTCTCCCCCGAAACTCCAGCAACAAAGAAAAGT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000638187.2
CDS-3UTR CCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATGACTGCCCCATTACCTaGGTGGCCATAACTGTATTC +
Preference number: 4 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYDCPIT*VAITVF
Trigger: GAATACAGTTATGGCCACCCAGGTAATGGGGCAGTC...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGACTGCCCCATTACCTaGGTGGCCATAACTGTATTC +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTDCPIT*VAITVF
Trigger: GAATACAGTTATGGCCACCCAGGTAATGGGGCAGTC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGGTAGATTACACTTCTTaGAAGCTGCATAGTCACATA +
Preference number: 4 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLVDYTS*KLHSHI
Trigger: TATGTGACTATGCAGCTTCCAAGAAGTGTAATCTAC...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp AGCTGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGGACCATGTAAAGAATaGCTGTCAACTTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: SCFFKIVHINQMAIEVFAGPCKE*LSTSSF
Trigger: GAAGCTGGAAGTTGACAGCCATTCTTTACATGGTCC...AGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp AGCTGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTATGCCAGTGCAGTTTTaGACACTGCTTCACGTTCTT +
Preference number: 4 (lower is better)
Translates to: SCFFKIVHINQMAIEVFAMPVQF*TLLHVL
Trigger: AAGAACGTGAAGCAGTGTCCAAAACTGCACTGGCAT...AGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp AGCTGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTCTTCCTTCATGGCTGTaGATGCCTTCATCTTCATCA +
Preference number: 4 (lower is better)
Translates to: SCFFKIVHINQMAIEVFALPSWL*MPSSSS
Trigger: TGATGAAGATGAAGGCATCCACAGCCATGAAGGAAG...AGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTAGGTCACTTCCTTCATaGCTGTGGATGCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFRSLPS*LWMPSS
Trigger: AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTAGATTCTTGTGGAACTaGCCGAGCCCCATGCAATCC +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCRFLWN*PSPMQS
Trigger: GGATTGCATGGGGCTCGGCCAGTTCCACAAGAATCT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTCTGCTAGATTCTTGTaGAACTGGCCGAGCCCCATG +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCSARFL*NWPSPM
Trigger: CATGGGGCTCGGCCAGTTCCACAAGAATCTAGCAGA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
3UTR CAA 72 bp AAGTTTTGTCCAGAGGATGAAATATGGGTAGATTCGTaGATATTAGCAGCAAGACCAGGTAGGCTCTCATCT +
Preference number: 4 (lower is better)
Translates to: KFCPEDEIWVDS*ILAARPGRLSS
Trigger: AGATGAGAGCCTACCTGGTCTTGCTGCTAATATCAACGAATCTACCCATATTTCATCCTCTGGACAAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGAGGTTCTACGACGCTaGGTTCCAAACTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTEVLRR*VPNFSV
Trigger: AACTGAGAAGTTTGGAACTCAGCGTCGTAGAACCTC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTAATATCTGGAGCACCTaGTGCCTCAAATACAGGCTG +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTNIWST*CLKYRL
Trigger: CAGCCTGTATTTGAGGCATCAGGTGCTCCAGATATT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCAATATCTGGAGCACCTaGTGCCTCAAATACAGGCTG +
Preference number: 4 (lower is better)
Translates to: FFKIVHINQMAIEVFAVINIWST*CLKYRL
Trigger: CAGCCTGTATTTGAGGCATCAGGTGCTCCAGATATT...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTAAATGTTTCCTCCAGTaGTACTCGCTCACTGTTGTG +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFKCFLQ*YSLTVV
Trigger: CACAACAGTGAGCGAGTATCACTGGAGGAAACATTT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
CDS-3UTR TCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTAAATGTTTCCTCCAGTaGTACTCGCTCACTGTTGTG +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHIKCFLQ*YSLTVV
Trigger: CACAACAGTGAGCGAGTATCACTGGAGGAAACATTT...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGGCTTCTCACCTGAATaGGTACGCATATGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFGFSPE*VRICLV
Trigger: AACTAGACATATGCGTACTCATTCAGGTGAGAAGCC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309042.12
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTCACATACAGGGCAATTaGACTGCCGTGGGTTCACAT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCHIQGN*TAVGSH
Trigger: ATGTGAACCCACGGCAGTTCAATTGCCCTGTATGTG...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCTCAACAGGTTCCTTCTaGGGAGGCTTACTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: FFKIVHINQMAIEVFAVISTGSF*GGLLLF
Trigger: GAAAAGCAGTAAGCCTCCTCAGAAGGAACCTGTTGA...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATATTCCTTCACCTGTGTTaGGTAATTTTTGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKIFLHLC*VIFGLL
Trigger: CAGGAGACCAAAAATTACTCAACACAGGTGAAGGAA...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCTCTGCTCCTACTTTCTaGAGAGGGGCTTCTTTATTT +
Preference number: 4 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCSAPTF*RGASLF
Trigger: AAATAAAGAAGCCCCTCTTCAGAAAGTAGGAGCAGA...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTAGGGGGAAGCATTGGTaGAACTGGTTCTTCAACTGT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTRGKHW*NWFFNC
Trigger: ACAGTTGAAGAACCAGTTTCACCAATGCTTCCCCCT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTCATTGTAGCAGGAGGTaGTGCCAGTGCAGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCHCSRR*CQCSFG
Trigger: TCCAAAACTGCACTGGCATCACCTCCTGCTACAATG...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTCCATACCCCACTGAATaGGTACGCATATGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHIPYPTE*VRICLV
Trigger: AACTAGACATATGCGTACTCATTCAGTGGGGTATGG...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTCATAATAAGCTGAGGTaGGGCCAGTTCAGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTHNKLR*GQFSFG
Trigger: TCCAAAGCTGAACTGGCCGCACCTCAGCTTATTATG...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTATTGTGAACCTGTCTTaGATGGCGGGTTACTTCATG +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFIVNLS*MAGYFM
Trigger: CATGAAGTAACCCGCCATGCAAGACAGGTTCACAAT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATTGTGAACCTGTCTTaGATGGCGGGTTACTTCATG +
Preference number: 4 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVIVNLS*MAGYFM
Trigger: CATGAAGTAACCCGCCATGCAAGACAGGTTCACAAT...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAACACTTCTTGGAAGCTaGATAGTCACATACAGGGCA +
Preference number: 4 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVTLLGS*IVTYRA
Trigger: TGCCCTGTATGTGACTATGCAGCTTCCAAGAAGTGT...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGACTTGCTCCTTCCGTaGCCTTTCACTCTGCATGTT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCDLLLP*PFTLHV
Trigger: AACATGCAGAGTGAAAGGGCACGGAAGGAGCAAGTC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTACTTCAATAAGGACTTaGTCCTTCCGTGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFTSIRT*SFRALS
Trigger: TGAAAGGGCACGGAAGGAGCAAGTCCTTATTGAAGT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTGCAGTTTTGGACACTaGTTCACGTTCTTCTACTGC +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFCSFGH*FTFFYC
Trigger: GCAGTAGAAGAACGTGAAGCAGTGTCCAAAACTGCA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTACTGGCCGAGCCCCATaGAATCCAGAATCATCACTA +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCTGRAP*NPESSL
Trigger: TAGTGATGATTCTGGATTGCATGGGGCTCGGCCAGT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTCTCCTGCCCTTGAGCTaGTTCTTCAAGATAGTACAC +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTLLPLS*FFKIVH
Trigger: GTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAG...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTATTTGCTCACAAACTTaGACACACTATTATTCTGCA +
Preference number: 4 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSICSQT*THYYSA
Trigger: TGCAGAATAATAGTGTGTGCAAGTTTGTGAGCAAAT...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGACTGCCCCATTACCTaGGTGGCCATAACTGTATTC +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCDCPIT*VAITVF
Trigger: GAATACAGTTATGGCCACCCAGGTAATGGGGCAGTC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGGACCATGTAAAGAATaGCTGTCAACTTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFGPCKE*LSTSSF
Trigger: GAAGCTGGAAGTTGACAGCCATTCTTTACATGGTCC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTGGAGAGGAGGCTTTTTaGAAATTGGCTCCATGTGAA +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHIGEEAF*KLAPCE
Trigger: TTCACATGGAGCCAATTTCCAAAAAGCCTCCTCTCC...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGGAGAGGAGGCTTTTTaGAAATTGGCTCCATGTGAA +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFGEEAF*KLAPCE
Trigger: TTCACATGGAGCCAATTTCCAAAAAGCCTCCTCTCC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATGCCAGTGCAGTTTTaGACACTGCTTCACGTTCTT +
Preference number: 4 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVMPVQF*TLLHVL
Trigger: AAGAACGTGAAGCAGTGTCCAAAACTGCACTGGCAT...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTATGCCAGTGCAGTTTTaGACACTGCTTCACGTTCTT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFMPVQF*TLLHVL
Trigger: AAGAACGTGAAGCAGTGTCCAAAACTGCACTGGCAT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCCTTCATGGCTGTaGATGCCTTCATCTTCATCA +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFLPSWL*MPSSSS
Trigger: TGATGAAGATGAAGGCATCCACAGCCATGAAGGAAG...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCAGGTCACTTCCTTCATaGCTGTGGATGCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: FFKIVHINQMAIEVFAVIRSLPS*LWMPSS
Trigger: AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCT...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTAGGTCACTTCCTTCATaGCTGTGGATGCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTRSLPS*LWMPSS
Trigger: AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGAGGTTCTACGACGCTaGGTTCCAAACTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCEVLRR*VPNFSV
Trigger: AACTGAGAAGTTTGGAACTCAGCGTCGTAGAACCTC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTAATATCTGGAGCACCTaGTGCCTCAAATACAGGCTG +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCNIWST*CLKYRL
Trigger: CAGCCTGTATTTGAGGCATCAGGTGCTCCAGATATT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTAAATGTTTCCTCCAGTaGTACTCGCTCACTGTTGTG +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTKCFLQ*YSLTVV
Trigger: CACAACAGTGAGCGAGTATCACTGGAGGAAACATTT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
CDS-3UTR TCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATAAATGTTTCCTCCAGTaGTACTCGCTCACTGTTGTG +
Preference number: 4 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYKCFLQ*YSLTVV
Trigger: CACAACAGTGAGCGAGTATCACTGGAGGAAACATTT...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCAGTCTTCTGAGAACTTaGGTAAGGACAAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCSLLRT*VRTKFT
Trigger: TGTGAACTTTGTCCTTACTCAAGTTCTCAGAAGACT...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTAAATGGCTTCTCACCTaGATGAGTACGCATATGTCT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFKWLLT*MSTHMS
Trigger: AGACATATGCGTACTCATTCAGGTGAGAAGCCATTT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309042.12
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTAGTCACCTGGATCACTaGCACATTATTAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFSHLDH*HIIRRL
Trigger: AAGCCTTCTAATAATGTGTCAGTGATCCAGGTGACT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATATTTCACCTCTGTTACTaGTTTTCGAGTTCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKIFHLCY*FSSSGS
Trigger: ACTACCAGAACTCGAAAATCAGTAACAGAGGTGAAA...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTCAACAGGTTCCTTCTaGGGAGGCTTACTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCSTGSF*GGLLLF
Trigger: GAAAAGCAGTAAGCCTCCTCAGAAGGAACCTGTTGA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTTTCCTTCACCTGTGTTaGGTAATTTTTGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHIFLHLC*VIFGLL
Trigger: CAGGAGACCAAAAATTACTCAACACAGGTGAAGGAA...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTTCCTTCACCTGTGTTaGGTAATTTTTGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFFLHLC*VIFGLL
Trigger: CAGGAGACCAAAAATTACTCAACACAGGTGAAGGAA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTCTGCTCCTACTTTCTaGAGAGGGGCTTCTTTATTT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFSAPTF*RGASLF
Trigger: AAATAAAGAAGCCCCTCTTCAGAAAGTAGGAGCAGA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTAGGGGGAAGCATTGGTaGAACTGGTTCTTCAACTGT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCRGKHW*NWFFNC
Trigger: ACAGTTGAAGAACCAGTTTCACCAATGCTTCCCCCT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCTCTTCATCAATTTCCTaGGACTCATTTGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCSSSIS*DSFAAI
Trigger: AATGGCAGCAAATGAGTCTCAGGAAATTGATGAAGA...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATATTATTCCAGCCTGAATaGGTACGCATATGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKILFQPE*VRICLV
Trigger: AACTAGACATATGCGTACTCATTCAGGCTGGAATAA...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611211.2
CDS-3UTR TCA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATACATTTTATTCCAGCCTaGATGAGTACGCATATGTCT +
Preference number: 4 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKIHFIPA*MSTHMS
Trigger: AGACATATGCGTACTCATTCAGGCTGGAATAAAATG...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611211.2
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTCATAATAAGCTGAGGTaGGGCCAGTTCAGCTTTGGA +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCHNKLR*GQFSFG
Trigger: TCCAAAGCTGAACTGGCCGCACCTCAGCTTATTATG...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTATTGTGAACCTGTCTTaGATGGCGGGTTACTTCATG +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTIVNLS*MAGYFM
Trigger: CATGAAGTAACCCGCCATGCAAGACAGGTTCACAAT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTACACTTCTTGGAAGCTaGATAGTCACATACAGGGCA +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTTLLGS*IVTYRA
Trigger: TGCCCTGTATGTGACTATGCAGCTTCCAAGAAGTGT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGAATTGCTTCCTGTATaGACATCCATCTCTTTCACC +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFELLPV*TSISFT
Trigger: GGTGAAAGAGATGGATGTGCATACAGGAAGCAATTC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTATTCTCCTCCACTTTaGTGTCACCCTTTGGCACTT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTYSPPL*CHPLAL
Trigger: AAGTGCCAAAGGGTGACAGCAAAGTGGAGGAGAATA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCTATTCTCCTCCACTTTaGTGTCACCCTTTGGCACTT +
Preference number: 4 (lower is better)
Translates to: FFKIVHINQMAIEVFAVIYSPPL*CHPLAL
Trigger: AAGTGCCAAAGGGTGACAGCAAAGTGGAGGAGAATA...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTCGTGCCCTTTCACTCTaGATGTTAGACTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHIRALSL*MLDFSF
Trigger: AAAGGAAAAGTCTAACATGCAGAGTGAAAGGGCACG...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCGTGCCCTTTCACTCTaGATGTTAGACTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFRALSL*MLDFSF
Trigger: AAAGGAAAAGTCTAACATGCAGAGTGAAAGGGCACG...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTACTTCAATAAGGACTTaGTCCTTCCGTGCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTTSIRT*SFRALS
Trigger: TGAAAGGGCACGGAAGGAGCAAGTCCTTATTGAAGT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp AGCTGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTGAGAGATCCTCTGTaGTTACACTTTCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: SCFFKIVHINQMAIEVFAVRDPL*LHFPLE
Trigger: TTCTAAAGGAAAGTGTAAGCACAGAGGATCTCTCAC...AGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTGAGAGATCCTCTGTaGTTACACTTTCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKIVRDPL*LHFPLE
Trigger: TTCTAAAGGAAAGTGTAAGCACAGAGGATCTCTCAC...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTGCAGTTTTGGACACTaGTTCACGTTCTTCTACTGC +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTCSFGH*FTFFYC
Trigger: GCAGTAGAAGAACGTGAAGCAGTGTCCAAAACTGCA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATTGCAGTTTTGGACACTaGTTCACGTTCTTCTACTGC +
Preference number: 4 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYCSFGH*FTFFYC
Trigger: GCAGTAGAAGAACGTGAAGCAGTGTCCAAAACTGCA...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCTGCAGTTTTGGACACTaGTTCACGTTCTTCTACTGC +
Preference number: 4 (lower is better)
Translates to: FFKIVHINQMAIEVFAVICSFGH*FTFFYC
Trigger: GCAGTAGAAGAACGTGAAGCAGTGTCCAAAACTGCA...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp AGCTGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTCTTCATGGCTGTGGATaGCTTCATCTTCATCAATTT +
Preference number: 4 (lower is better)
Translates to: SCFFKIVHINQMAIEVFALHGCG*LHLHQF
Trigger: AAATTGATGAAGATGAAGGCATCCACAGCCATGAAG...AGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCCTTCATGGCTGTGGATaGCTTCATCTTCATCAATTT +
Preference number: 4 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCLHGCG*LHLHQF
Trigger: AAATTGATGAAGATGAAGGCATCCACAGCCATGAAG...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTCTCCTGCCCTTGAGCTaGTTCTTCAAGATAGTACAC +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCLLPLS*FFKIVH
Trigger: GTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAG...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAAAGCTAACAGATACCTaGTGGTTTAGTACACTCTCT +
Preference number: 4 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKIKLTDT*WFSTLS
Trigger: AGAGAGTGTACTAAACCAGCAGGTATCTGTTAGCTT...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp AGCTGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTTCTGGTAGTCACCTaGATCACTGACACATTATTA +
Preference number: 4 (lower is better)
Translates to: SCFFKIVHINQMAIEVFAVLVVT*ITDTLL
Trigger: TAATAATGTGTCAGTGATCCAGGTGACTACCAGAAC...AGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGGACCATGTAAAGAATaGCTGTCAACTTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTGPCKE*LSTSSF
Trigger: GAAGCTGGAAGTTGACAGCCATTCTTTACATGGTCC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGGAGAGGAGGCTTTTTaGAAATTGGCTCCATGTGAA +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTGEEAF*KLAPCE
Trigger: TTCACATGGAGCCAATTTCCAAAAAGCCTCCTCTCC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTATGCCAGTGCAGTTTTaGACACTGCTTCACGTTCTT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTMPVQF*TLLHVL
Trigger: AAGAACGTGAAGCAGTGTCCAAAACTGCACTGGCAT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATATGCCAGTGCAGTTTTaGACACTGCTTCACGTTCTT +
Preference number: 4 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYMPVQF*TLLHVL
Trigger: AAGAACGTGAAGCAGTGTCCAAAACTGCACTGGCAT...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTCTTCCTTCATGGCTGTaGATGCCTTCATCTTCATCA +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTLPSWL*MPSSSS
Trigger: TGATGAAGATGAAGGCATCCACAGCCATGAAGGAAG...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTAGGTCACTTCCTTCATaGCTGTGGATGCCTTCATCT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCRSLPS*LWMPSS
Trigger: AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATATACACATTAACCAAATaGCGATTGAGGTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKIYTLTK*RLRCLL
Trigger: CAGCAAACACCTCAATCGCCATTTGGTTAATGTGTA...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTAAATGTTTCCTCCAGTaGTACTCGCTCACTGTTGTG +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCKCFLQ*YSLTVV
Trigger: CACAACAGTGAGCGAGTATCACTGGAGGAAACATTT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTAGTCTTCTGAGAACTTaGGTAAGGACAAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFSLLRT*VRTKFT
Trigger: TGTGAACTTTGTCCTTACTCAAGTTCTCAGAAGACT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTAGTCTTCTGAGAACTTaGGTAAGGACAAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHISLLRT*VRTKFT
Trigger: TGTGAACTTTGTCCTTACTCAAGTTCTCAGAAGACT...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGGCTTCTCACCTGAATaGGTACGCATATGTCTAGTT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCGFSPE*VRICLV
Trigger: AACTAGACATATGCGTACTCATTCAGGTGAGAAGCC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309042.12
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTAAATGGCTTCTCACCTaGATGAGTACGCATATGTCT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTKWLLT*MSTHMS
Trigger: AGACATATGCGTACTCATTCAGGTGAGAAGCCATTT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000309042.12
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTAGTCACCTGGATCACTaGCACATTATTAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTSHLDH*HIIRRL
Trigger: AAGCCTTCTAATAATGTGTCAGTGATCCAGGTGACT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTTTCACCTCTGTTACTaGTTTTCGAGTTCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFFHLCY*FSSSGS
Trigger: ACTACCAGAACTCGAAAATCAGTAACAGAGGTGAAA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
39% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCCCTTTGGCACTTCCTaGCTATTATTTTTGGATTTG +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFPFGTS*LLFLDL
Trigger: CAAATCCAAAAATAATAGTCAGGAAGTGCCAAAGGG...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTTCCTTCACCTGTGTTaGGTAATTTTTGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTFLHLC*VIFGLL
Trigger: CAGGAGACCAAAAATTACTCAACACAGGTGAAGGAA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTCTGCTCCTACTTTCTaGAGAGGGGCTTCTTTATTT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTSAPTF*RGASLF
Trigger: AAATAAAGAAGCCCCTCTTCAGAAAGTAGGAGCAGA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTCTTCATCAATTTCCTaGGACTCATTTGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFSSSIS*DSFAAI
Trigger: AATGGCAGCAAATGAGTCTCAGGAAATTGATGAAGA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp AGCTGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTAATCTTTTCCCTTTCTaGAAGAACGATCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: SCFFKIVHINQMAIEVFANLFPF*KNDHRR
Trigger: TCTTCTGTGATCGTTCTTTCAGAAAGGGAAAAGATT...AGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTAACACCAACCATCTATaGGAAAAGGTTCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHINTNHL*EKVLLK
Trigger: TTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTT...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTAACACCAACCATCTATaGGAAAAGGTTCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFNTNHL*EKVLLK
Trigger: TTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTGTAAAGTAGCCATATaGACACCAACCATCTATGAG +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFCKVAI*TPTIYE
Trigger: CTCATAGATGGTTGGTGTTCATATGGCTACTTTACA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTATGTAAAGTAGCCATATaGACACCAACCATCTATGAG +
Preference number: 4 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVCKVAI*TPTIYE
Trigger: CTCATAGATGGTTGGTGTTCATATGGCTACTTTACA...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCTTGTACTGCCAAATCTaGAACCTGCCTCAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: FFKIVHINQMAIEVFAVILYCQI*NLPQRD
Trigger: ATCTCTTTGAGGCAGGTTTCAGATTTGGCAGTACAA...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTTGTACTGCCAAATCTaGAACCTGCCTCAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTLYCQI*NLPQRD
Trigger: ATCTCTTTGAGGCAGGTTTCAGATTTGGCAGTACAA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTACTACTTTTCTTTGTTaGTGGAGTTTCGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCTTFLC*WSFGGE
Trigger: CTCTCCCCCGAAACTCCAGCAACAAAGAAAAGTAGT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000638187.2
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTATTGTGAACCTGTCTTaGATGGCGGGTTACTTCATG +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCIVNLS*MAGYFM
Trigger: CATGAAGTAACCCGCCATGCAAGACAGGTTCACAAT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTACACTTCTTGGAAGCTaGATAGTCACATACAGGGCA +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCTLLGS*IVTYRA
Trigger: TGCCCTGTATGTGACTATGCAGCTTCCAAGAAGTGT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATGAATTGCTTCCTGTATaGACATCCATCTCTTTCACC +
Preference number: 4 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYELLPV*TSISFT
Trigger: GGTGAAAGAGATGGATGTGCATACAGGAAGCAATTC...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTATTCTCCTCCACTTTaGTGTCACCCTTTGGCACTT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCYSPPL*CHPLAL
Trigger: AAGTGCCAAAGGGTGACAGCAAAGTGGAGGAGAATA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTCGTGCCCTTTCACTCTaGATGTTAGACTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTRALSL*MLDFSF
Trigger: AAAGGAAAAGTCTAACATGCAGAGTGAAAGGGCACG...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTGTGAGAGATCCTCTGTaGTTACACTTTCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHIVRDPL*LHFPLE
Trigger: TTCTAAAGGAAAGTGTAAGCACAGAGGATCTCTCAC...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGTGAGAGATCCTCTGTaGTTACACTTTCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFVRDPL*LHFPLE
Trigger: TTCTAAAGGAAAGTGTAAGCACAGAGGATCTCTCAC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTGCAGTTTTGGACACTaGTTCACGTTCTTCTACTGC +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCCSFGH*FTFFYC
Trigger: GCAGTAGAAGAACGTGAAGCAGTGTCCAAAACTGCA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCATGGCTGTGGATaGCTTCATCTTCATCAATTT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFLHGCG*LHLHQF
Trigger: AAATTGATGAAGATGAAGGCATCCACAGCCATGAAG...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTAGATTACACTTCTTaGAAGCTGCATAGTCACATA +
Preference number: 4 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKIVDYTS*KLHSHI
Trigger: TATGTGACTATGCAGCTTCCAAGAAGTGTAATCTAC...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAGTTCTGGTAGTCACCTaGATCACTGACACATTATTA +
Preference number: 4 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVVLVVT*ITDTLL
Trigger: TAATAATGTGTCAGTGATCCAGGTGACTACCAGAAC...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGTTCTGGTAGTCACCTaGATCACTGACACATTATTA +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFVLVVT*ITDTLL
Trigger: TAATAATGTGTCAGTGATCCAGGTGACTACCAGAAC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGGACCATGTAAAGAATaGCTGTCAACTTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCGPCKE*LSTSSF
Trigger: GAAGCTGGAAGTTGACAGCCATTCTTTACATGGTCC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGGAGAGGAGGCTTTTTaGAAATTGGCTCCATGTGAA +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCGEEAF*KLAPCE
Trigger: TTCACATGGAGCCAATTTCCAAAAAGCCTCCTCTCC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGTGTTGAGTAATTTTTaGTCTCCTGATGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFVLSNF*SPDASS
Trigger: AGAAGAGGCATCAGGAGACCAAAAATTACTCAACAC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAGTGTTGAGTAATTTTTaGTCTCCTGATGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVVLSNF*SPDASS
Trigger: AGAAGAGGCATCAGGAGACCAAAAATTACTCAACAC...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTGTGTTGAGTAATTTTTaGTCTCCTGATGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHIVLSNF*SPDASS
Trigger: AGAAGAGGCATCAGGAGACCAAAAATTACTCAACAC...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTCTTCCTTCATGGCTGTaGATGCCTTCATCTTCATCA +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCLPSWL*MPSSSS
Trigger: TGATGAAGATGAAGGCATCCACAGCCATGAAGGAAG...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTATACACATTAACCAAATaGCGATTGAGGTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVYTLTK*RLRCLL
Trigger: CAGCAAACACCTCAATCGCCATTTGGTTAATGTGTA...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCCTGATCACATTTAAATaGCTTCTCACCCATCTAGAT +
Preference number: 4 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCLITFK*LLTHLD
Trigger: ATCTAGATGGGTGAGAAGCCATTTAAATGTGATCAG...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTAACAGCCCAAGCTATTaGGTAATTTGGCCCAACATC +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCNSPSY*VIWPNI
Trigger: GATGTTGGGCCAAATTACCCAATAGCTTGGGCTGTT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675105.1
3UTR CAA 72 bp ACTGAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTaGAGCTGCTTCTTCAAGATAGTACACATTAACCAA +
Preference number: 4 (lower is better)
Translates to: TETLFKVSLLLP*SCFFKIVHINQ
Trigger: TTGGTTAATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTCAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCAGTCTTCTGAGAACTTaGGTAAGGACAAAGTTCACA +
Preference number: 4 (lower is better)
Translates to: FFKIVHINQMAIEVFAVISLLRT*VRTKFT
Trigger: TGTGAACTTTGTCCTTACTCAAGTTCTCAGAAGACT...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTAAATGGCTTCTCACCTaGATGAGTACGCATATGTCT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCKWLLT*MSTHMS
Trigger: AGACATATGCGTACTCATTCAGGTGAGAAGCCATTT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000309042.12
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTAGTCACCTGGATCACTaGCACATTATTAGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCSHLDH*HIIRRL
Trigger: AAGCCTTCTAATAATGTGTCAGTGATCCAGGTGACT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATTTTCACCTCTGTTACTaGTTTTCGAGTTCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYFHLCY*FSSSGS
Trigger: ACTACCAGAACTCGAAAATCAGTAACAGAGGTGAAA...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTCCCTTTGGCACTTCCTaGCTATTATTTTTGGATTTG +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTPFGTS*LLFLDL
Trigger: CAAATCCAAAAATAATAGTCAGGAAGTGCCAAAGGG...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTTCCTTCACCTGTGTTaGGTAATTTTTGGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCFLHLC*VIFGLL
Trigger: CAGGAGACCAAAAATTACTCAACACAGGTGAAGGAA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTCTGCTCCTACTTTCTaGAGAGGGGCTTCTTTATTT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCSAPTF*RGASLF
Trigger: AAATAAAGAAGCCCCTCTTCAGAAAGTAGGAGCAGA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTAATCTTTTCCCTTTCTaGAAGAACGATCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFNLFPF*KNDHRR
Trigger: TCTTCTGTGATCGTTCTTTCAGAAAGGGAAAAGATT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATAACACCAACCATCTATaGGAAAAGGTTCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYNTNHL*EKVLLK
Trigger: TTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTT...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTAACACCAACCATCTATaGGAAAAGGTTCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTNTNHL*EKVLLK
Trigger: TTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTGTAAAGTAGCCATATaGACACCAACCATCTATGAG +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTCKVAI*TPTIYE
Trigger: CTCATAGATGGTTGGTGTTCATATGGCTACTTTACA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTTGTACTGCCAAATCTaGAACCTGCCTCAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCLYCQI*NLPQRD
Trigger: ATCTCTTTGAGGCAGGTTTCAGATTTGGCAGTACAA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTGAAGTTGCTTCTATCTaGTGTTTTGTAATCACAGTG +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHIEVASI*CFVITV
Trigger: CACTGTGATTACAAAACAGCAGATAGAAGCAACTTC...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGAATTGCTTCCTGTATaGACATCCATCTCTTTCACC +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCELLPV*TSISFT
Trigger: GGTGAAAGAGATGGATGTGCATACAGGAAGCAATTC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTCGTGCCCTTTCACTCTaGATGTTAGACTTTTCCTTT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCRALSL*MLDFSF
Trigger: AAAGGAAAAGTCTAACATGCAGAGTGAAAGGGCACG...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGTGAGAGATCCTCTGTaGTTACACTTTCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTVRDPL*LHFPLE
Trigger: TTCTAAAGGAAAGTGTAAGCACAGAGGATCTCTCAC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTCTTCATGGCTGTGGATaGCTTCATCTTCATCAATTT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTLHGCG*LHLHQF
Trigger: AAATTGATGAAGATGAAGGCATCCACAGCCATGAAG...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATAAGCTAACAGATACCTaGTGGTTTAGTACACTCTCT +
Preference number: 4 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYKLTDT*WFSTLS
Trigger: AGAGAGTGTACTAAACCAGCAGGTATCTGTTAGCTT...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAATTTGCTCACAAACTTaGACACACTATTATTCTGCA +
Preference number: 4 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKIICSQT*THYYSA
Trigger: TGCAGAATAATAGTGTGTGCAAGTTTGTGAGCAAAT...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTATCGACTTTTCTAATTaGTCCCTAACCCCTAACTGC +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCIDFSN*SLTPNC
Trigger: GCAGTTAGGGGTTAGGGAGCAATTAGAAAAGTCGAT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR CCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGTTCTGGTAGTCACCTaGATCACTGACACATTATTA +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTVLVVT*ITDTLL
Trigger: TAATAATGTGTCAGTGATCCAGGTGACTACCAGAAC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGTGTTGAGTAATTTTTaGTCTCCTGATGCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTVLSNF*SPDASS
Trigger: AGAAGAGGCATCAGGAGACCAAAAATTACTCAACAC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCTACACATTAACCAAATaGCGATTGAGGTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: FFKIVHINQMAIEVFAVIYTLTK*RLRCLL
Trigger: CAGCAAACACCTCAATCGCCATTTGGTTAATGTGTA...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTGATCACATTTAAATaGCTTCTCACCCATCTAGAT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFLITFK*LLTHLD
Trigger: ATCTAGATGGGTGAGAAGCCATTTAAATGTGATCAG...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTTTCACCTCTGTTACTaGTTTTCGAGTTCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCFHLCY*FSSSGS
Trigger: ACTACCAGAACTCGAAAATCAGTAACAGAGGTGAAA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTCCCTTTGGCACTTCCTaGCTATTATTTTTGGATTTG +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCPFGTS*LLFLDL
Trigger: CAAATCCAAAAATAATAGTCAGGAAGTGCCAAAGGG...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTCTTCATCAATTTCCTaGGACTCATTTGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCSSSIS*DSFAAI
Trigger: AATGGCAGCAAATGAGTCTCAGGAAATTGATGAAGA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTAATCTTTTCCCTTTCTaGAAGAACGATCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTNLFPF*KNDHRR
Trigger: TCTTCTGTGATCGTTCTTTCAGAAAGGGAAAAGATT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATAATCTTTTCCCTTTCTaGAAGAACGATCACAGAAGA +
Preference number: 4 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYNLFPF*KNDHRR
Trigger: TCTTCTGTGATCGTTCTTTCAGAAAGGGAAAAGATT...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTAACACCAACCATCTATaGGAAAAGGTTCTCCTCAAA +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCNTNHL*EKVLLK
Trigger: TTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR TCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTGTAAAGTAGCCATATaGACACCAACCATCTATGAG +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCCKVAI*TPTIYE
Trigger: CTCATAGATGGTTGGTGTTCATATGGCTACTTTACA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTATCTGAGGAGGCTTACTaGTTTTCTTACTTGATTTAT +
Preference number: 4 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVSEEAY*FSYLIY
Trigger: ATAAATCAAGTAAGAAAAGCAGTAAGCCTCCTCAGA...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTCTGAGGAGGCTTACTaGTTTTCTTACTTGATTTAT +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFSEEAY*FSYLIY
Trigger: ATAAATCAAGTAAGAAAAGCAGTAAGCCTCCTCAGA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGTGAGAGATCCTCTGTaGTTACACTTTCCTTTAGAA +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCVRDPL*LHFPLE
Trigger: TTCTAAAGGAAAGTGTAAGCACAGAGGATCTCTCAC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTCTTCATGGCTGTGGATaGCTTCATCTTCATCAATTT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCLHGCG*LHLHQF
Trigger: AAATTGATGAAGATGAAGGCATCCACAGCCATGAAG...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTATTTGCTCACAAACTTaGACACACTATTATTCTGCA +
Preference number: 4 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHIICSQT*THYYSA
Trigger: TGCAGAATAATAGTGTGTGCAAGTTTGTGAGCAAAT...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR GCA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTATTTGCTCACAAACTTaGACACACTATTATTCTGCA +
Preference number: 4 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFICSQT*THYYSA
Trigger: TGCAGAATAATAGTGTGTGCAAGTTTGTGAGCAAAT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATGTAGATTACACTTCTTaGAAGCTGCATAGTCACATA +
Preference number: 4 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYVDYTS*KLHSHI
Trigger: TATGTGACTATGCAGCTTCCAAGAAGTGTAATCTAC...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGTTCTGGTAGTCACCTaGATCACTGACACATTATTA +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCVLVVT*ITDTLL
Trigger: TAATAATGTGTCAGTGATCCAGGTGACTACCAGAAC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTACACATTAACCAAATaGCGATTGAGGTGTTTGCTG +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCYTLTK*RLRCLL
Trigger: CAGCAAACACCTCAATCGCCATTTGGTTAATGTGTA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATCTGATCACATTTAAATaGCTTCTCACCCATCTAGAT +
Preference number: 4 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYLITFK*LLTHLD
Trigger: ATCTAGATGGGTGAGAAGCCATTTAAATGTGATCAG...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTAAGTTCACATTTATATaGGCGTTCTCCTTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCKFTFI*AFSFVL
Trigger: GAGGACAAAGGAGAACGCCCATATAAATGTGAACTT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675341.1
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTAGCTATTGGGTAATTTaGCCCAACATCGACTTTTCT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCSYWVI*PNIDFS
Trigger: AGAAAAGTCGATGTTGGGCCAAATTACCCAATAGCT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGAAGTTGCTTCTATCTaGTGTTTTGTAATCACAGTG +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCEVASI*CFVITV
Trigger: CACTGTGATTACAAAACAGCAGATAGAAGCAACTTC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCTCTGAGGAGGCTTACTaGTTTTCTTACTTGATTTAT +
Preference number: 4 (lower is better)
Translates to: FFKIVHINQMAIEVFAVISEEAY*FSYLIY
Trigger: ATAAATCAAGTAAGAAAAGCAGTAAGCCTCCTCAGA...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGTAGATTACACTTCTTaGAAGCTGCATAGTCACATA +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCVDYTS*KLHSHI
Trigger: TATGTGACTATGCAGCTTCCAAGAAGTGTAATCTAC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGTATTCAACAAAAGTTaGAAGCAAATGCCATCACAG +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCVFNKS*KQMPSQ
Trigger: CTGTGATGGCATTTGCTTCCAACTTTTGTTGAATAC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTCTGAGGAGGCTTACTaGTTTTCTTACTTGATTTAT +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCSEEAY*FSYLIY
Trigger: ATAAATCAAGTAAGAAAAGCAGTAAGCCTCCTCAGA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR GCA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTATTTGCTCACAAACTTaGACACACTATTATTCTGCA +
Preference number: 4 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCICSQT*THYYSA
Trigger: TGCAGAATAATAGTGTGTGCAAGTTTGTGAGCAAAT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS GCA 90 bp TGGGTGCTGGGGCCGTCGTGGACCAAGAAGGCCCAGGAGTGGGGCTaGAGAGGGTGCTCAGGCCTCCGGGCCTCGCCCTGCCGTCTCGGC +
Preference number: 5 (lower is better)
Translates to: WVLGPSWTKKAQEWG*RGCSGLRASPCRLG
Trigger: GCCGAGACGGCAGGGCGAGGCCCGGAGGCCTGAGCACCCTCTGCAGCCCCACTCCTGGGCCTTCTTGGTCCACGACGGCCCCAGCACCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000309042.12
ENST00000640168.2
CDS GCA 90 bp ATTGTTAGGAAGACCGTCCAGGCACAGCCCGAAAGCCCAACGTGCTaGACGAATTCCTCCGTGCTGCTGCCACCAGCGCCTGCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: IVRKTVQAQPESPTC*TNSSVLLPPAPASA
Trigger: CGCCGAGGCAGGCGCTGGTGGCAGCAGCACGGAGGAATTCGTGCAGCACGTTGGGCTTTCGGGCTGTGCCTGGACGGTCTTCCTAACAAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS GCA 90 bp ACGATTGTTAGGAAGACCGTCCAGGCACAGCCCGAAAGCCCAACGTaGTGCACGAATTCCTCCGTGCTGCTGCCACCAGCGCCTGCCTCG +
Preference number: 5 (lower is better)
Translates to: TIVRKTVQAQPESPT*CTNSSVLLPPAPAS
Trigger: CGAGGCAGGCGCTGGTGGCAGCAGCACGGAGGAATTCGTGCAGCACGTTGGGCTTTCGGGCTGTGCCTGGACGGTCTTCCTAACAATCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR CAA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGTTCGAGCTCTTGCCTTaGTCCTCCGCTCCAGGTGTT +
Preference number: 5 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLFELLP*SSAPGV
Trigger: AACACCTGGAGCGGAGGACAAAGGCAAGAGCTCGAA...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGTTTTCTGCTAGATTCTaGTGGAACTGGCCGAGCCCC +
Preference number: 5 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLFSARF*WNWPSP
Trigger: GGGGCTCGGCCAGTTCCACAAGAATCTAGCAGAAAA...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp CTCCACCTGAACGGGCCCCTTCTGAACCGCCTCTGTGGGAGCAGGCCCCATCTGCATTGTGAACCTGTCTaGCATGGCGGGTTACTTCAT +
Preference number: 5 (lower is better)
Translates to: LHLNGPLLNRLCGSRPHLHCEPV*HGGLLH
Trigger: ATGAAGTAACCCGCCATGCAAGACAGGTTCACAATG...CAGATGGGGCCTGCTCCCACAGAGGCGGTTCAGAAGGGGCCCGTTCAGGTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS TCA 90 bp CATAACTGTATTCGGCCTTCCTCGGTGAGGAGGGGCGGGCGACCCTaGGTCGCCGCTCCTTCTCCGACTACTTTTCTTTGTTGCTGGAGT +
Preference number: 5 (lower is better)
Translates to: HNCIRPSSVRRGGRP*VAAPSPTTFLCCWS
Trigger: ACTCCAGCAACAAAGAAAAGTAGTCGGAGAAGGAGCGGCGACTCAGGGTCGCCCGCCCCTCCTCACCGAGGAAGGCCGAATACAGTTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000622863.4
ENST00000638187.2
ENST00000640168.2
ENST00000640343.2
CDS GCA 90 bp GGCATTCGGCCATTTTCTCAAAATACCAAACACAAAGCAGCTCTTTaGAAACTCGGGCGCTCTCGCTTCCTCTCGCCTCGGCCCGCTCAC +
Preference number: 5 (lower is better)
Translates to: GIRPFSQNTKHKAAL*KLGRSRFLSPRPAH
Trigger: GTGAGCGGGCCGAGGCGAGAGGAAGCGAGAGCGCCCGAGTTTGCAAAGAGCTGCTTTGTGTTTGGTATTTTGAGAAAATGGCCGAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR CAA 90 bp GAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATAGGGAGGGTGGTAAAGTaGGGTGCTGGGGCCGTCGTG +
Preference number: 5 (lower is better)
Translates to: EISQLGLQSWLPTSSLCIGRVVK*GAGAVV
Trigger: CACGACGGCCCCAGCACCCAACTTTACCACCCTCCC...TATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000640168.2
CDS TCA 90 bp CGTGCTGCTGCCACCAGCGCCTGCCTCGGCGGCGGCATTCCTAACTaGAATAGGCATTCGGCCATTTTCTCAAAATACCAAACACAAAGC +
Preference number: 5 (lower is better)
Translates to: RAAATSACLGGGIPN*NRHSAIFSKYQTQS
Trigger: GCTTTGTGTTTGGTATTTTGAGAAAATGGCCGAATGCCTATTTCAGTTAGGAATGCCGCCGCCGAGGCAGGCGCTGGTGGCAGCAGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR CAA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGGGGAGCAGGCCCCATTaGGGCAACCTCCGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLGSRPH*GNLRLS
Trigger: GCTCAGACGGAGGTTGCCCAAATGGGGCCTGCTCCC...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp GGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATTCGAGCTCTTGCCTTaGTCCTCCGCTCCAGGTGTT +
Preference number: 5 (lower is better)
Translates to: GKSVSLVYSRGFQHPPCAFELLP*SSAPGV
Trigger: AACACCTGGAGCGGAGGACAAAGGCAAGAGCTCGAA...TGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS CCA 90 bp AAACAGAGGGCGAAGGCTGTCCCGGGGCTGAACAGCCCAAGCTATTaGGTAATTTGGCCCAACATCGACTTTTCTAATTGCTCCCTAACC +
Preference number: 5 (lower is better)
Translates to: KQRAKAVPGLNSPSY*VIWPNIDFSNCSLT
Trigger: GGTTAGGGAGCAATTAGAAAAGTCGATGTTGGGCCAAATTACCCAATAGCTTGGGCTGTTCAGCCCCGGGACAGCCTTCGCCCTCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS GCA 90 bp ATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTaGATATCACCTCCTTGGACAGGGCAGACGCTCTGTATGAGTTCT +
Preference number: 5 (lower is better)
Translates to: ISQLGLQSWLPTSSL*ISPPWTGQTLCMSS
Trigger: AGAACTCATACAGAGCGTCTGCCCTGTCCAAGGAGGTGATATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640168.2
CDS-3UTR CAA 90 bp AGGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCTCCGACTACTTTTCTTaGTTGCTGGAGTTTCGGGGG +
Preference number: 5 (lower is better)
Translates to: REISQLGLQSWLPTSSLCSDYFS*LLEFRG
Trigger: CCCCCGAAACTCCAGCAACAAAGAAAAGTAGTCGGA...GCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR CAA 90 bp GAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATATTCGAGCTCTTGCCTTaGTCCTCCGCTCCAGGTGTT +
Preference number: 5 (lower is better)
Translates to: EISQLGLQSWLPTSSLCIFELLP*SSAPGV
Trigger: AACACCTGGAGCGGAGGACAAAGGCAAGAGCTCGAA...TATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR CAA 90 bp AGGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCGGGAAATCAGTCAGCTaGGTTTACAGTCGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: REISQLGLQSWLPTSSLCGKSVS*VYSRGF
Trigger: GAAGCCACGACTGTAAACCAAGCTGACTGATTTCCC...GCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGGGAGGGTGGTAAAGTaGGGTGCTGGGGCCGTCGTG +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFGRVVK*GAGAVV
Trigger: CACGACGGCCCCAGCACCCAACTTTACCACCCTCCC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000309042.12
CDS-3UTR CAA 90 bp GGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATTCCGACTACTTTTCTTaGTTGCTGGAGTTTCGGGGG +
Preference number: 5 (lower is better)
Translates to: GNQSAWFTVVASNILPVHSDYFS*LLEFRG
Trigger: CCCCCGAAACTCCAGCAACAAAGAAAAGTAGTCGGA...ATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR CAA 90 bp GAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATACAGATTCCCTGGCTTTaGCCTGCTTCTCTGCACTCT +
Preference number: 5 (lower is better)
Translates to: EISQLGLQSWLPTSSLCIQIPWL*PASLHS
Trigger: AGAGTGCAGAGAAGCAGGCAAAAGCCAGGGAATCTG...TATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR CAA 90 bp CTTAAGGGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTCAGATTCCCTGGCTTTaGCCTGCTTCTCTGCACTCT +
Preference number: 5 (lower is better)
Translates to: LKGNQSAWFTVVASNILPQIPWL*PASLHS
Trigger: AGAGTGCAGAGAAGCAGGCAAAAGCCAGGGAATCTG...AGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCCCTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640343.2
CDS-3UTR CAA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAGGGAGCAGGCCCCATTaGGGCAACCTCCGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVGSRPH*GNLRLS
Trigger: GCTCAGACGGAGGTTGCCCAAATGGGGCCTGCTCCC...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGGGAGCAGGCCCCATTaGGGCAACCTCCGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFGSRPH*GNLRLS
Trigger: GCTCAGACGGAGGTTGCCCAAATGGGGCCTGCTCCC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp GGAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATGGGAAATCAGTCAGCTaGGTTTACAGTCGTGGCTTC +
Preference number: 5 (lower is better)
Translates to: GNQSAWFTVVASNILPVHGKSVS*VYSRGF
Trigger: GAAGCCACGACTGTAAACCAAGCTGACTGATTTCCC...ATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000640168.2
ENST00000640343.2
CDS-3UTR CAA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGCAGATTCCCTGGCTTTaGCCTGCTTCTCTGCACTCT +
Preference number: 5 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLQIPWL*PASLHS
Trigger: AGAGTGCAGAGAAGCAGGCAAAAGCCAGGGAATCTG...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATGGGAGCAGGCCCCATTaGGGCAACCTCCGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYGSRPH*GNLRLS
Trigger: GCTCAGACGGAGGTTGCCCAAATGGGGCCTGCTCCC...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGGGAGCAGGCCCCATTaGGGCAACCTCCGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTGSRPH*GNLRLS
Trigger: GCTCAGACGGAGGTTGCCCAAATGGGGCCTGCTCCC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTTTTCTGCTAGATTCTaGTGGAACTGGCCGAGCCCC +
Preference number: 5 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLFSARF*WNWPSP
Trigger: GGGGCTCGGCCAGTTCCACAAGAATCTAGCAGAAAA...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTCTCCCTTAGCCGCTTaGACTGCCAAGGCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLSPLAA*TAKASF
Trigger: AAAGGAAGCCTTGGCAGTCAAAGCGGCTAAGGGAGA...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTAGGACACCCACCAGTTaGTGGAGATCCCTGAGAAAG +
Preference number: 5 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSRTPTS*WRSLRK
Trigger: CTTTCTCAGGGATCTCCACAAACTGGTGGGTGTCCT...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGAGGACACCCACCAGTTaGTGGAGATCCCTGAGAAAG +
Preference number: 5 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLRTPTS*WRSLRK
Trigger: CTTTCTCAGGGATCTCCACAAACTGGTGGGTGTCCT...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTCCGACTACTTTTCTTaGTTGCTGGAGTTTCGGGGG +
Preference number: 5 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLSDYFS*LLEFRG
Trigger: CCCCCGAAACTCCAGCAACAAAGAAAAGTAGTCGGA...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000514063.2
ENST00000616975.5
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGGGAGCAGGCCCCATTaGGGCAACCTCCGTCTGAGC +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCGSRPH*GNLRLS
Trigger: GCTCAGACGGAGGTTGCCCAAATGGGGCCTGCTCCC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCTTCGAGCTCTTGCCTTaGTCCTCCGCTCCAGGTGTT +
Preference number: 5 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCFELLP*SSAPGV
Trigger: AACACCTGGAGCGGAGGACAAAGGCAAGAGCTCGAA...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTTTATTCTCCTCCACTTaGCTGTCACCCTTTGGCACT +
Preference number: 5 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSLFSST*LSPFGT
Trigger: AGTGCCAAAGGGTGACAGCAAAGTGGAGGAGAATAA...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTAACTTCAATAAGGACTaGCTCCTTCCGTGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSNFNKD*LLPCPF
Trigger: GAAAGGGCACGGAAGGAGCAAGTCCTTATTGAAGTT...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGCTACCCTCTGACATGTaGTCACTTAGGTCACTTCCT +
Preference number: 5 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLLPSDM*SLRSLP
Trigger: AGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAG...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTATTCGAGCTCTTGCCTTaGTCCTCCGCTCCAGGTGTT +
Preference number: 5 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVFELLP*SSAPGV
Trigger: AACACCTGGAGCGGAGGACAAAGGCAAGAGCTCGAA...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp GAAATCAGTCAGCTTGGTTTACAGTCGTGGCTTCCAACATCCTCCCTGTGCATAGAGTCTTCTGAGAACTaGAGTAAGGACAAAGTTCAC +
Preference number: 5 (lower is better)
Translates to: EISQLGLQSWLPTSSLCIESSEN*SKDKVH
Trigger: GTGAACTTTGTCCTTACTCAAGTTCTCAGAAGACTC...TATGCACAGGGAGGATGTTGGAAGCCACGACTGTAAACCAAGCTGACTGATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640343.2
CDS-3UTR CAA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGGCGGGTTACTTCATGTaGATTAGAGGCCACATAACT +
Preference number: 5 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLAGYFM*IRGHIT
Trigger: AGTTATGTGGCCTCTAATCAACATGAAGTAACCCGC...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTCATTGTGAACCTGTCTaGCATGGCGGGTTACTTCAT +
Preference number: 5 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCHCEPV*HGGLLH
Trigger: ATGAAGTAACCCGCCATGCAAGACAGGTTCACAATG...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTTTATTCTCCTCCACTTaGCTGTCACCCTTTGGCACT +
Preference number: 5 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCLFSST*LSPFGT
Trigger: AGTGCCAAAGGGTGACAGCAAAGTGGAGGAGAATAA...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTACAGCTACTTGGGAGGTaGAGGCAGGAGAATCGCTTG +
Preference number: 5 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVQLLGR*RQENRL
Trigger: CAAGCGATTCTCCTGCCTCAACCTCCCAAGTAGCTG...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611211.2
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTATGGGCGTTCTCCTTaGTCCTCCGCTCCAGGTGTT +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFYGRSP*SSAPGV
Trigger: AACACCTGGAGCGGAGGACAAAGGAGAACGCCCATA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000675341.1
CDS CCA 90 bp GCATCCCACACCCCCTATTCATTTGTGACCCCAAGAGTAGAGTACTaGATTATTCTCTATCCATTCATCAGGACCCAAATGTACCAATTC +
Preference number: 5 (lower is better)
Translates to: ASHTPYSFVTPRVEY*IILYPFIRTQMYQF
Trigger: GAATTGGTACATTTGGGTCCTGATGAATGGATAGAGAATAATCCAGTACTCTACTCTTGGGGTCACAAATGAATAGGGGGTGTGGGATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675249.1
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTTCGAGCTCTTGCCTTaGTCCTCCGCTCCAGGTGTT +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTFELLP*SSAPGV
Trigger: AACACCTGGAGCGGAGGACAAAGGCAAGAGCTCGAA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCAGATTCCCTGGCTTTaGCCTGCTTCTCTGCACTCT +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFQIPWL*PASLHS
Trigger: AGAGTGCAGAGAAGCAGGCAAAAGCCAGGGAATCTG...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
CDS-3UTR CAA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGCGGGTTACTTCATGTaGATTAGAGGCCACATAACT +
Preference number: 5 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCAGYFM*IRGHIT
Trigger: AGTTATGTGGCCTCTAATCAACATGAAGTAACCCGC...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATATCACATACAGGGCAATaGAACTGCCGTGGGTTCACA +
Preference number: 5 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKISHTGQ*NCRGFT
Trigger: TGTGAACCCACGGCAGTTCAATTGCCCTGTATGTGA...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGTGAGCAAGTACAATTaGGGCACCCACCATCTGAGC +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFVSKYN*GTHHLS
Trigger: GCTCAGATGGTGGGTGCCCAAATTGTACTTGCTCAC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTGTGAGCAAGTACAATTaGGGCACCCACCATCTGAGC +
Preference number: 5 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHIVSKYN*GTHHLS
Trigger: GCTCAGATGGTGGGTGCCCAAATTGTACTTGCTCAC...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAGTGAGCAAGTACAATTaGGGCACCCACCATCTGAGC +
Preference number: 5 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVVSKYN*GTHHLS
Trigger: GCTCAGATGGTGGGTGCCCAAATTGTACTTGCTCAC...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCGAGGCTTTTTGGAAATaGGCTCCATGTGAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCEAFWK*APCEGE
Trigger: CTCCCCTTCACATGGAGCCAATTTCCAAAAAGCCTC...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp AGCTGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGATGCCAGTGCAGTTTaGGACACTGCTTCACGTTCT +
Preference number: 5 (lower is better)
Translates to: SCFFKIVHINQMAIEVFADASAV*DTASRS
Trigger: AGAACGTGAAGCAGTGTCCAAAACTGCACTGGCATC...AGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTTTTCTGCTAGATTCTaGTGGAACTGGCCGAGCCCC +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFFSARF*WNWPSP
Trigger: GGGGCTCGGCCAGTTCCACAAGAATCTAGCAGAAAA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
44% GC, longest homopolymer 9 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTTCTCCCTTAGCCGCTTaGACTGCCAAGGCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHISPLAA*TAKASF
Trigger: AAAGGAAGCCTTGGCAGTCAAAGCGGCTAAGGGAGA...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTAGGACACCCACCAGTTaGTGGAGATCCCTGAGAAAG +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFRTPTS*WRSLRK
Trigger: CTTTCTCAGGGATCTCCACAAACTGGTGGGTGTCCT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTACACAAAGCAGCTCTTaGCAAACTCGGGCGCTCTCG +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTTQSSS*QTRALS
Trigger: CGAGAGCGCCCGAGTTTGCAAAGAGCTGCTTTGTGT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTCCGACTACTTTTCTTaGTTGCTGGAGTTTCGGGGG +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFSDYFS*LLEFRG
Trigger: CCCCCGAAACTCCAGCAACAAAGAAAAGTAGTCGGA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000638187.2
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTTCGAGCTCTTGCCTTaGTCCTCCGCTCCAGGTGTT +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCFELLP*SSAPGV
Trigger: AACACCTGGAGCGGAGGACAAAGGCAAGAGCTCGAA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTCAGATTCCCTGGCTTTaGCCTGCTTCTCTGCACTCT +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTQIPWL*PASLHS
Trigger: AGAGTGCAGAGAAGCAGGCAAAAGCCAGGGAATCTG...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
CDS-3UTR CAA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCCAGATTCCCTGGCTTTaGCCTGCTTCTCTGCACTCT +
Preference number: 5 (lower is better)
Translates to: FFKIVHINQMAIEVFAVIQIPWL*PASLHS
Trigger: AGAGTGCAGAGAAGCAGGCAAAAGCCAGGGAATCTG...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTCACATACAGGGCAATaGAACTGCCGTGGGTTCACA +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFSHTGQ*NCRGFT
Trigger: TGTGAACCCACGGCAGTTCAATTGCCCTGTATGTGA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGCTGAATTTTTCTGAATaGCTTCCTGTATGCACATCC +
Preference number: 5 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLLNFSE*LPVCTS
Trigger: GGATGTGCATACAGGAAGCAATTCAGAAAAATTCAG...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGTGAGCAAGTACAATTaGGGCACCCACCATCTGAGC +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTVSKYN*GTHHLS
Trigger: GCTCAGATGGTGGGTGCCCAAATTGTACTTGCTCAC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGAGGCTTTTTGGAAATaGGCTCCATGTGAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFEAFWK*APCEGE
Trigger: CTCCCCTTCACATGGAGCCAATTTCCAAAAAGCCTC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAAACTTCAATAAGGACTaGCTCCTTCCGTGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKINFNKD*LLPCPF
Trigger: GAAAGGGCACGGAAGGAGCAAGTCCTTATTGAAGTT...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTTTCCTTCACCTGTGTaGAGTAATTTTTGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLFPSPV*SNFWSP
Trigger: AGGAGACCAAAAATTACTCAACACAGGTGAAGGAAA...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp TCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTGGATGCCTTCATCTATATGGGTAGATTCGTaGATATTAGCAGCAAGACCA +
Preference number: 5 (lower is better)
Translates to: SDMLSLRSLPSWLWMPSSIWVDS*ILAARP
Trigger: TGGTCTTGCTGCTAATATCAACGAATCTACCCATAT...AGATGAAGGCATCCACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATACTGAAGGGGGAAGCATaGGTGAAACTGGTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKILKGEA*VKLVLQ
Trigger: TTGAAGAACCAGTTTCACCAATGCTTCCCCCTTCAG...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCCTGAAGGGGGAAGCATaGGTGAAACTGGTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCLKGEA*VKLVLQ
Trigger: TTGAAGAACCAGTTTCACCAATGCTTCCCCCTTCAG...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGATGCCAGTGCAGTTTaGGACACTGCTTCACGTTCT +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFDASAV*DTASRS
Trigger: AGAACGTGAAGCAGTGTCCAAAACTGCACTGGCATC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTGATGCCAGTGCAGTTTaGGACACTGCTTCACGTTCT +
Preference number: 5 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHIDASAV*DTASRS
Trigger: AGAACGTGAAGCAGTGTCCAAAACTGCACTGGCATC...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATACTACCCTCTGACATGTaGTCACTTAGGTCACTTCCT +
Preference number: 5 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKILPSDM*SLRSLP
Trigger: AGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAG...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCTTTTCTGCTAGATTCTaGTGGAACTGGCCGAGCCCC +
Preference number: 5 (lower is better)
Translates to: FFKIVHINQMAIEVFAVIFSARF*WNWPSP
Trigger: GGGGCTCGGCCAGTTCCACAAGAATCTAGCAGAAAA...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCTCTCCCTTAGCCGCTTaGACTGCCAAGGCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: FFKIVHINQMAIEVFAVISPLAA*TAKASF
Trigger: AAAGGAAGCCTTGGCAGTCAAAGCGGCTAAGGGAGA...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTCTCCCTTAGCCGCTTaGACTGCCAAGGCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTSPLAA*TAKASF
Trigger: AAAGGAAGCCTTGGCAGTCAAAGCGGCTAAGGGAGA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp GAATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGAAATCTGGACTGTACTaGTTTCACCAGCCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: ESSLPSDMLSLRSLPSWLKSGLY*FHQPFS
Trigger: TGAAAAAGGCTGGTGAAACAAGTACAGTCCAGATTT...CAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTAGGACACCCACCAGTTaGTGGAGATCCCTGAGAAAG +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTRTPTS*WRSLRK
Trigger: CTTTCTCAGGGATCTCCACAAACTGGTGGGTGTCCT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTCAGATTCCCTGGCTTTaGCCTGCTTCTCTGCACTCT +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCQIPWL*PASLHS
Trigger: AGAGTGCAGAGAAGCAGGCAAAAGCCAGGGAATCTG...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
CDS-3UTR CAA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTCTGAATTTTTCTGAATaGCTTCCTGTATGCACATCC +
Preference number: 5 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCLNFSE*LPVCTS
Trigger: GGATGTGCATACAGGAAGCAATTCAGAAAAATTCAG...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp AGCTGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTCTTTGCTGTCACCCTTaGGCACTTCCTGACTATTAT +
Preference number: 5 (lower is better)
Translates to: SCFFKIVHINQMAIEVFALCCHP*ALPDYY
Trigger: ATAATAGTCAGGAAGTGCCAAAGGGTGACAGCAAAG...AGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTTATTCTCCTCCACTTaGCTGTCACCCTTTGGCACT +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFLFSST*LSPFGT
Trigger: AGTGCCAAAGGGTGACAGCAAAGTGGAGGAGAATAA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
42% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGTGAGCAAGTACAATTaGGGCACCCACCATCTGAGC +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCVSKYN*GTHHLS
Trigger: GCTCAGATGGTGGGTGCCCAAATTGTACTTGCTCAC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGAGGCTTTTTGGAAATaGGCTCCATGTGAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTEAFWK*APCEGE
Trigger: CTCCCCTTCACATGGAGCCAATTTCCAAAAAGCCTC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATGAGGCTTTTTGGAAATaGGCTCCATGTGAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYEAFWK*APCEGE
Trigger: CTCCCCTTCACATGGAGCCAATTTCCAAAAAGCCTC...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCGAGGCTTTTTGGAAATaGGCTCCATGTGAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: FFKIVHINQMAIEVFAVIEAFWK*APCEGE
Trigger: CTCCCCTTCACATGGAGCCAATTTCCAAAAAGCCTC...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTACTGAAGGGGGAAGCATaGGTGAAACTGGTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVLKGEA*VKLVLQ
Trigger: TTGAAGAACCAGTTTCACCAATGCTTCCCCCTTCAG...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGATGCCAGTGCAGTTTaGGACACTGCTTCACGTTCT +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTDASAV*DTASRS
Trigger: AGAACGTGAAGCAGTGTCCAAAACTGCACTGGCATC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTTTTCTGCTAGATTCTaGTGGAACTGGCCGAGCCCC +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCFSARF*WNWPSP
Trigger: GGGGCTCGGCCAGTTCCACAAGAATCTAGCAGAAAA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTCTCCCTTAGCCGCTTaGACTGCCAAGGCTTCCTTT +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCSPLAA*TAKASF
Trigger: AAAGGAAGCCTTGGCAGTCAAAGCGGCTAAGGGAGA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATATCATTACTCCTGCCCTaGAGCTGCTTCTTCAAGATA +
Preference number: 5 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKISLLLP*SCFFKI
Trigger: TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGA...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTAAATCTGGACTGTACTaGTTTCACCAGCCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCKSGLY*FHQPFS
Trigger: TGAAAAAGGCTGGTGAAACAAGTACAGTCCAGATTT...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGAACAGCCCAAGCTATaGGGTAATTTGGCCCAACAT +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFEQPKL*GNLAQH
Trigger: ATGTTGGGCCAAATTACCCAATAGCTTGGGCTGTTC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR CAA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATGACTACTTTTCTTTGTaGCTGGAGTTTCGGGGGAGA +
Preference number: 5 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYDYFSL*LEFRGR
Trigger: TCTCCCCCGAAACTCCAGCAACAAAGAAAAGTAGTC...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514063.2
ENST00000616975.5
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGACTACTTTTCTTTGTaGCTGGAGTTTCGGGGGAGA +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTDYFSL*LEFRGR
Trigger: TCTCCCCCGAAACTCCAGCAACAAAGAAAAGTAGTC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000638187.2
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTCCGACTACTTTTCTTaGTTGCTGGAGTTTCGGGGG +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCSDYFS*LLEFRG
Trigger: CCCCCGAAACTCCAGCAACAAAGAAAAGTAGTCGGA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000638187.2
CDS-3UTR CAA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGAGTCTTCTGAGAACTaGAGTAAGGACAAAGTTCAC +
Preference number: 5 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKIESSEN*SKDKVH
Trigger: GTGAACTTTGTCCTTACTCAAGTTCTCAGAAGACTC...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp AGCTGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGAGTCTTCTGAGAACTaGAGTAAGGACAAAGTTCAC +
Preference number: 5 (lower is better)
Translates to: SCFFKIVHINQMAIEVFAESSEN*SKDKVH
Trigger: GTGAACTTTGTCCTTACTCAAGTTCTCAGAAGACTC...AGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp TTTAGAAGCCAGCTATCTTTAACAGGCACTAAGCCAACTTCAATAAGGACTTGCGAGTCTTCTGAGAACTaGAGTAAGGACAAAGTTCAC +
Preference number: 5 (lower is better)
Translates to: FRSQLSLTGTKPTSIRTCESSEN*SKDKVH
Trigger: GTGAACTTTGTCCTTACTCAAGTTCTCAGAAGACTC...GCAAGTCCTTATTGAAGTTGGCTTAGTGCCTGTTAAAGATAGCTGGCTTCTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp AATCATCACTACCCTCTGACATGTTGTCACTTAGGTCACTTCCTTCATGGCTGTAGCTCTACATGTTTTTaGAAGTTGCTTCTATCTGCT +
Preference number: 5 (lower is better)
Translates to: NHHYPLTCCHLGHFLHGCSSTCF*KLLLSA
Trigger: AGCAGATAGAAGCAACTTCAAAAAACATGTAGAGCT...ACAGCCATGAAGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAGTGATGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTCACATACAGGGCAATaGAACTGCCGTGGGTTCACA +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCSHTGQ*NCRGFT
Trigger: TGTGAACCCACGGCAGTTCAATTGCCCTGTATGTGA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTTGCTGTCACCCTTaGGCACTTCCTGACTATTAT +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFLCCHP*ALPDYY
Trigger: ATAATAGTCAGGAAGTGCCAAAGGGTGACAGCAAAG...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTACTTTGCTGTCACCCTTaGGCACTTCCTGACTATTAT +
Preference number: 5 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVLCCHP*ALPDYY
Trigger: ATAATAGTCAGGAAGTGCCAAAGGGTGACAGCAAAG...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCTTATTCTCCTCCACTTaGCTGTCACCCTTTGGCACT +
Preference number: 5 (lower is better)
Translates to: FFKIVHINQMAIEVFAVILFSST*LSPFGT
Trigger: AGTGCCAAAGGGTGACAGCAAAGTGGAGGAGAATAA...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGAGGCTTTTTGGAAATaGGCTCCATGTGAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCEAFWK*APCEGE
Trigger: CTCCCCTTCACATGGAGCCAATTTCCAAAAAGCCTC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTAACTTCAATAAGGACTaGCTCCTTCCGTGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTNFNKD*LLPCPF
Trigger: GAAAGGGCACGGAAGGAGCAAGTCCTTATTGAAGTT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTACTCTTAAATTTTCCTTaGGCAGTGGTGGTGATGGTG +
Preference number: 5 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVLLNFP*AVVVMV
Trigger: CACCATCACCACCACTGCCAAAGGAAAATTTAAGAG...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTCTTAAATTTTCCTTaGGCAGTGGTGGTGATGGTG +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFLLNFP*AVVVMV
Trigger: CACCATCACCACCACTGCCAAAGGAAAATTTAAGAG...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTCTGAAGGGGGAAGCATaGGTGAAACTGGTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTLKGEA*VKLVLQ
Trigger: TTGAAGAACCAGTTTCACCAATGCTTCCCCCTTCAG...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGATGCCAGTGCAGTTTaGGACACTGCTTCACGTTCT +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCDASAV*DTASRS
Trigger: AGAACGTGAAGCAGTGTCCAAAACTGCACTGGCATC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTCTACCCTCTGACATGTaGTCACTTAGGTCACTTCCT +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTLPSDM*SLRSLP
Trigger: AGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAG...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTCATTACTCCTGCCCTaGAGCTGCTTCTTCAAGATA +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFSLLLP*SCFFKI
Trigger: TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTATCATTACTCCTGCCCTaGAGCTGCTTCTTCAAGATA +
Preference number: 5 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVSLLLP*SCFFKI
Trigger: TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGA...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp AGCTGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTCTGATAGACTGTCTATaGCTGGGGGAATTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: SCFFKIVHINQMAIEVFALIDCL*LGEFFF
Trigger: GAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAG...AGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGACTACTTTTCTTTGTaGCTGGAGTTTCGGGGGAGA +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCDYFSL*LEFRGR
Trigger: TCTCCCCCGAAACTCCAGCAACAAAGAAAAGTAGTC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000638187.2
CDS-3UTR CAA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTGAGTCTTCTGAGAACTaGAGTAAGGACAAAGTTCAC +
Preference number: 5 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHIESSEN*SKDKVH
Trigger: GTGAACTTTGTCCTTACTCAAGTTCTCAGAAGACTC...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000514063.2
ENST00000611211.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTGAGTCTTCTGAGAACTaGAGTAAGGACAAAGTTCAC +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFESSEN*SKDKVH
Trigger: GTGAACTTTGTCCTTACTCAAGTTCTCAGAAGACTC...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGCGGGTTACTTCATGTaGATTAGAGGCCACATAACT +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTAGYFM*IRGHIT
Trigger: AGTTATGTGGCCTCTAATCAACATGAAGTAACCCGC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTCATTGTGAACCTGTCTaGCATGGCGGGTTACTTCAT +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCHCEPV*HGGLLH
Trigger: ATGAAGTAACCCGCCATGCAAGACAGGTTCACAATG...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTTATTCTCCTCCACTTaGCTGTCACCCTTTGGCACT +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCLFSST*LSPFGT
Trigger: AGTGCCAAAGGGTGACAGCAAAGTGGAGGAGAATAA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTAACTTCAATAAGGACTaGCTCCTTCCGTGCCCTTTC +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCNFNKD*LLPCPF
Trigger: GAAAGGGCACGGAAGGAGCAAGTCCTTATTGAAGTT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTCTCTTAAATTTTCCTTaGGCAGTGGTGGTGATGGTG +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTLLNFP*AVVVMV
Trigger: CACCATCACCACCACTGCCAAAGGAAAATTTAAGAG...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCCTCTTAAATTTTCCTTaGGCAGTGGTGGTGATGGTG +
Preference number: 5 (lower is better)
Translates to: FFKIVHINQMAIEVFAVILLNFP*AVVVMV
Trigger: CACCATCACCACCACTGCCAAAGGAAAATTTAAGAG...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATATTTCCTTCACCTGTGTaGAGTAATTTTTGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKIFPSPV*SNFWSP
Trigger: AGGAGACCAAAAATTACTCAACACAGGTGAAGGAAA...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTCTGAAGGGGGAAGCATaGGTGAAACTGGTTCTTCAA +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCLKGEA*VKLVLQ
Trigger: TTGAAGAACCAGTTTCACCAATGCTTCCCCCTTCAG...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTCTACCCTCTGACATGTaGTCACTTAGGTCACTTCCT +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCLPSDM*SLRSLP
Trigger: AGGAAGTGACCTAAGTGACAACATGTCAGAGGGTAG...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATTCATTACTCCTGCCCTaGAGCTGCTTCTTCAAGATA +
Preference number: 5 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYSLLLP*SCFFKI
Trigger: TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGA...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTTCATTACTCCTGCCCTaGAGCTGCTTCTTCAAGATA +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTSLLLP*SCFFKI
Trigger: TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGA...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTACTGATAGACTGTCTATaGCTGGGGGAATTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVLIDCL*LGEFFF
Trigger: GAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAG...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTGATAGACTGTCTATaGCTGGGGGAATTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFLIDCL*LGEFFF
Trigger: GAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAG...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTAAGCTATTGGGTAATTaGGCCCAACATCGACTTTTC +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFKLLGN*AQHRLF
Trigger: GAAAAGTCGATGTTGGGCCAAATTACCCAATAGCTT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTGAGTCTTCTGAGAACTaGAGTAAGGACAAAGTTCAC +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTESSEN*SKDKVH
Trigger: GTGAACTTTGTCCTTACTCAAGTTCTCAGAAGACTC...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGCGGGTTACTTCATGTaGATTAGAGGCCACATAACT +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCAGYFM*IRGHIT
Trigger: AGTTATGTGGCCTCTAATCAACATGAAGTAACCCGC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTACTGAATTTTTCTGAATaGCTTCCTGTATGCACATCC +
Preference number: 5 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVLNFSE*LPVCTS
Trigger: GGATGTGCATACAGGAAGCAATTCAGAAAAATTCAG...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTGAATTTTTCTGAATaGCTTCCTGTATGCACATCC +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFLNFSE*LPVCTS
Trigger: GGATGTGCATACAGGAAGCAATTCAGAAAAATTCAG...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTCTTTGCTGTCACCCTTaGGCACTTCCTGACTATTAT +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCLCCHP*ALPDYY
Trigger: ATAATAGTCAGGAAGTGCCAAAGGGTGACAGCAAAG...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTTTTCCTTCACCTGTGTaGAGTAATTTTTGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFFPSPV*SNFWSP
Trigger: AGGAGACCAAAAATTACTCAACACAGGTGAAGGAAA...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
39% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTATATGGGTAGATTCGTaGATATTAGCAGCAAGACCA +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFIWVDS*ILAARP
Trigger: TGGTCTTGCTGCTAATATCAACGAATCTACCCATAT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTATATGGGTAGATTCGTaGATATTAGCAGCAAGACCA +
Preference number: 5 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHIIWVDS*ILAARP
Trigger: TGGTCTTGCTGCTAATATCAACGAATCTACCCATAT...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTCATTACTCCTGCCCTaGAGCTGCTTCTTCAAGATA +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCSLLLP*SCFFKI
Trigger: TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp GAAACCTTGTTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAAAGAAAACTGCCCTTTaGCAAACAAGTCTAAAAGCA +
Preference number: 5 (lower is better)
Translates to: ETLFKVSLLLPLSCFFKIKKTAL*QTSLKA
Trigger: TGCTTTTAGACTTGTTTGCAAAAGGGCAGTTTTCTT...TATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAACAAGGTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp TGCTTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTACATTTGCTCACAAACTaGCACACACTATTATTCTGC +
Preference number: 5 (lower is better)
Translates to: CFFKIVHINQMAIEVFAVHLLTN*HTLLFC
Trigger: GCAGAATAATAGTGTGTGCAAGTTTGTGAGCAAATG...TACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCATTTGCTCACAAACTaGCACACACTATTATTCTGC +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFHLLTN*HTLLFC
Trigger: GCAGAATAATAGTGTGTGCAAGTTTGTGAGCAAATG...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTAAATCTGGACTGTACTaGTTTCACCAGCCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFKSGLY*FHQPFS
Trigger: TGAAAAAGGCTGGTGAAACAAGTACAGTCCAGATTT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTGAGTCTTCTGAGAACTaGAGTAAGGACAAAGTTCAC +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCESSEN*SKDKVH
Trigger: GTGAACTTTGTCCTTACTCAAGTTCTCAGAAGACTC...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp TTCAAAGTTTCATTACTCCTGCCCTTGAGCTGCTTCTTCAAGATAGTACACATTAGCTCTACATGTTTTTaGAAGTTGCTTCTATCTGCT +
Preference number: 5 (lower is better)
Translates to: FKVSLLLPLSCFFKIVHISSTCF*KLLLSA
Trigger: AGCAGATAGAAGCAACTTCAAAAAACATGTAGAGCT...AATGTGTACTATCTTGAAGAAGCAGCTCAAGGGCAGGAGTAATGAAACTTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTCTGAATTTTTCTGAATaGCTTCCTGTATGCACATCC +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTLNFSE*LPVCTS
Trigger: GGATGTGCATACAGGAAGCAATTCAGAAAAATTCAG...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTATATGGGTAGATTCGTaGATATTAGCAGCAAGACCA +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTIWVDS*ILAARP
Trigger: TGGTCTTGCTGCTAATATCAACGAATCTACCCATAT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTCTGATAGACTGTCTATaGCTGGGGGAATTTTTCTTC +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCLIDCL*LGEFFF
Trigger: GAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAG...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTCAGGAAGTAAATACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTAAGAAAACTGCCCTTTaGCAAACAAGTCTAAAAGCA +
Preference number: 5 (lower is better)
Translates to: TQEVNTWTDRLSIAGGIFKKTAL*QTSLKA
Trigger: TGCTTTTAGACTTGTTTGCAAAAGGGCAGTTTTCTT...AAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGTATTTACTTCCTGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp AAACTATACTGTCAGTCTGATGTTTACCATTTAAAGTTTCACCCTCTGGCGTATCATTTGCTCACAAACTaGCACACACTATTATTCTGC +
Preference number: 5 (lower is better)
Translates to: KLYCQSDVYHLKFHPLAYHLLTN*HTLLFC
Trigger: GCAGAATAATAGTGTGTGCAAGTTTGTGAGCAAATG...ATACGCCAGAGGGTGAAACTTTAAATGGTAAACATCAGACTGACAGTATAGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTCTGAATTTTTCTGAATaGCTTCCTGTATGCACATCC +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCLNFSE*LPVCTS
Trigger: GGATGTGCATACAGGAAGCAATTCAGAAAAATTCAG...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTTTTCCTTCACCTGTGTaGAGTAATTTTTGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCFPSPV*SNFWSP
Trigger: AGGAGACCAAAAATTACTCAACACAGGTGAAGGAAA...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTATATGGGTAGATTCGTaGATATTAGCAGCAAGACCA +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCIWVDS*ILAARP
Trigger: TGGTCTTGCTGCTAATATCAACGAATCTACCCATAT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp TTCTTCAAGATAGTACACATTAACCAAATGGCGATTGAGGTGTTTGCTGTAATCAAGAAAACTGCCCTTTaGCAAACAAGTCTAAAAGCA +
Preference number: 5 (lower is better)
Translates to: FFKIVHINQMAIEVFAVIKKTAL*QTSLKA
Trigger: TGCTTTTAGACTTGTTTGCAAAAGGGCAGTTTTCTT...GATTACAGCAAACACCTCAATCGCCATTTGGTTAATGTGTACTATCTTGAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
CDS-3UTR CAA 90 bp CCATATGAACACCAACCATCTATGAGAAAAGGTTCTCCTCAAACATTTAACACTAAGAAAACTGCCCTTTaGCAAACAAGTCTAAAAGCA +
Preference number: 5 (lower is better)
Translates to: PYEHQPSMRKGSPQTFNTKKTAL*QTSLKA
Trigger: TGCTTTTAGACTTGTTTGCAAAAGGGCAGTTTTCTT...AGTGTTAAATGTTTGAGGAGAACCTTTTCTCATAGATGGTTGGTGTTCATATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTCATTTGCTCACAAACTaGCACACACTATTATTCTGC +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCHLLTN*HTLLFC
Trigger: GCAGAATAATAGTGTGTGCAAGTTTGTGAGCAAATG...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS-3UTR CAA 90 bp ACTTGGACTGATAGACTGTCTATTGCTGGGGGAATTTTTCTTCAATTTAAATGTAAATCTGGACTGTACTaGTTTCACCAGCCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: TWTDRLSIAGGIFLQFKCKSGLY*FHQPFS
Trigger: TGAAAAAGGCTGGTGAAACAAGTACAGTCCAGATTT...ACATTTAAATTGAAGAAAAATTCCCCCAGCAATAGACAGTCTATCAGTCCAAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000619101.5
ENST00000638187.2
ENST00000675105.1
ENST00000675341.1
CDS GCA 72 bp GGCTGCAGAGGGTGCTCAGGCCTCCGGGCCTCGCCCTaGCGTCTCGGCTGCGGCAGCCGCCGCCAGGGTCTG +
Preference number: 6 (lower is better)
Translates to: GCRGCSGLRASP*RLGCGSRRQGL
Trigger: CAGACCCTGGCGGCGGCTGCCGCAGCCGAGACGGCAGGGCGAGGCCCGGAGGCCTGAGCACCCTCTGCAGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000309042.12
ENST00000640168.2
CDS GCA 72 bp GAGCTCGCGGCAGCCGCACATTCCAACACAGGACGCTaGGCCGCGCACCCAGTCCGCGCCGCCGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: ELAAAAHSNTGR*AAHPVRAAAAA
Trigger: GGCGGCGGCGGCGGCGCGGACTGGGTGCGCGGCGCAGCGTCCTGTGTTGGAATGTGCGGCTGCCGCGAGCTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000640168.2
CDS GCA 72 bp CCGAAAGCCCAACGTGCTGCACGAATTCCTCCGTGCTaGTGCCACCAGCGCCTGCCTCGGCGGCGGCATTCC +
Preference number: 6 (lower is better)
Translates to: PKAQRAARIPPC*CHQRLPRRRHS
Trigger: GGAATGCCGCCGCCGAGGCAGGCGCTGGTGGCAGCAGCACGGAGGAATTCGTGCAGCACGTTGGGCTTTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS GCA 72 bp AGCCCGAAAGCCCAACGTGCTGCACGAATTCCTCCGTaGTGCTGCCACCAGCGCCTGCCTCGGCGGCGGCAT +
Preference number: 6 (lower is better)
Translates to: SPKAQRAARIPP*CCHQRLPRRRH
Trigger: ATGCCGCCGCCGAGGCAGGCGCTGGTGGCAGCAGCACGGAGGAATTCGTGCAGCACGTTGGGCTTTCGGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS GCA 72 bp GGGCGCTCTCGCTTCCTCTCGCCTCGGCCCGCTCACTaGACACATTTACACACCAACTCGCGGGAGTCGCCC +
Preference number: 6 (lower is better)
Translates to: GRSRFLSPRPAH*THLHTNSRESP
Trigger: GGGCGACTCCCGCGAGTTGGTGTGTAAATGTGTGCAGTGAGCGGGCCGAGGCGAGAGGAAGCGAGAGCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS TCA 72 bp ACCTGGGTGGCCATAACTGTATTCGGCCTTCCTCGGTaGGGAGGGGCGGGCGACCCTGAGTCGCCGCTCCTT +
Preference number: 6 (lower is better)
Translates to: TWVAITVFGLPR*GGAGDPESPLL
Trigger: AAGGAGCGGCGACTCAGGGTCGCCCGCCCCTCCTCACCGAGGAAGGCCGAATACAGTTATGGCCACCCAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000622863.4
ENST00000638187.2
ENST00000640168.2
ENST00000640343.2
CDS GCA 72 bp AAGACCGTCCAGGCACAGCCCGAAAGCCCAACGTGCTaGACGAATTCCTCCGTGCTGCTGCCACCAGCGCCT +
Preference number: 6 (lower is better)
Translates to: KTVQAQPESPTC*TNSSVLLPPAP
Trigger: AGGCGCTGGTGGCAGCAGCACGGAGGAATTCGTGCAGCACGTTGGGCTTTCGGGCTGTGCCTGGACGGTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS GCA 72 bp AGGAAGACCGTCCAGGCACAGCCCGAAAGCCCAACGTaGTGCACGAATTCCTCCGTGCTGCTGCCACCAGCG +
Preference number: 6 (lower is better)
Translates to: RKTVQAQPESPT*CTNSSVLLPPA
Trigger: CGCTGGTGGCAGCAGCACGGAGGAATTCGTGCAGCACGTTGGGCTTTCGGGCTGTGCCTGGACGGTCTTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS TCA 72 bp ATTCGGCCTTCCTCGGTGAGGAGGGGCGGGCGACCCTaGGTCGCCGCTCCTTCTCCGACTACTTTTCTTTGT +
Preference number: 6 (lower is better)
Translates to: IRPSSVRRGGRP*VAAPSPTTFLC
Trigger: ACAAAGAAAAGTAGTCGGAGAAGGAGCGGCGACTCAGGGTCGCCCGCCCCTCCTCACCGAGGAAGGCCGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000309042.12
ENST00000514063.2
ENST00000616975.5
ENST00000622863.4
ENST00000638187.2
ENST00000640168.2
ENST00000640343.2
CDS TCA 72 bp TGCCTGAACCCAGGAGGTAGAGGCTGTGGTGAGCTGTaGTCACACCACTGCCTGGGCTCCAGGGTGAGACTC +
Preference number: 6 (lower is better)
Translates to: CLNPGGRGCGEL*SHHCLGSRVRL
Trigger: GAGTCTCACCCTGGAGCCCAGGCAGTGGTGTGATCACAGCTCACCACAGCCTCTACCTCCTGGGTTCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675249.1
CDS CAA 90 bp AGGCATTCGGCCATTTTCTCAAAATACCAAACACAAAGCAGCTCTTaGCAAACTCGGGCGCTCTCGCTTCCTCTCGCCTCGGCCCGCTCA +
Preference number: 6 (lower is better)
Translates to: RHSAIFSKYQTQSSS*QTRALSLPLASARS
Trigger: TGAGCGGGCCGAGGCGAGAGGAAGCGAGAGCGCCCGAGTTTGCAAAGAGCTGCTTTGTGTTTGGTATTTTGAGAAAATGGCCGAATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS TCA 72 bp GCCACCAGCGCCTGCCTCGGCGGCGGCATTCCTAACTaGAATAGGCATTCGGCCATTTTCTCAAAATACCAA +
Preference number: 6 (lower is better)
Translates to: ATSACLGGGIPN*NRHSAIFSKYQ
Trigger: TTGGTATTTTGAGAAAATGGCCGAATGCCTATTTCAGTTAGGAATGCCGCCGCCGAGGCAGGCGCTGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS CCA 72 bp GCGAAGGCTGTCCCGGGGCTGAACAGCCCAAGCTATTaGGTAATTTGGCCCAACATCGACTTTTCTAATTGC +
Preference number: 6 (lower is better)
Translates to: AKAVPGLNSPSY*VIWPNIDFSNC
Trigger: GCAATTAGAAAAGTCGATGTTGGGCCAAATTACCCAATAGCTTGGGCTGTTCAGCCCCGGGACAGCCTTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS CCA 72 bp GTCCCGGGGCTGAACAGCCCAAGCTATTGGGTAATTTaGCCCAACATCGACTTTTCTAATTGCTCCCTAACC +
Preference number: 6 (lower is better)
Translates to: VPGLNSPSYWVI*PNIDFSNCSLT
Trigger: GGTTAGGGAGCAATTAGAAAAGTCGATGTTGGGCCAAATTACCCAATAGCTTGGGCTGTTCAGCCCCGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675105.1
CDS CCA 72 bp ACCCCCTATTCATTTGTGACCCCAAGAGTAGAGTACTaGATTATTCTCTATCCATTCATCAGGACCCAAATG +
Preference number: 6 (lower is better)
Translates to: TPYSFVTPRVEY*IILYPFIRTQM
Trigger: CATTTGGGTCCTGATGAATGGATAGAGAATAATCCAGTACTCTACTCTTGGGGTCACAAATGAATAGGGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675249.1