Pregenerated sensors for RERGL (Homo sapiens)
Ensembl gene IDs: ENSG00000111404Ensembl transcript IDs: ENST00000229002.6, ENST00000536890.1, ENST00000538724.6, ENST00000540148.5, ENST00000541632.1
Found 59 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGAATTGGCATCGGTTTTCCAGTGCCAGCTTTTGCCCTTCTTCCCAGCCAACCTACAGCTCTTTTACAATaGCTAGTTTGTGGCTCCCGG | + |
|
Preference number: 2 (lower is better) Translates to: RIGIGFPVPAFALLPSQPTALLQ*LVCGSR Trigger: CCGGGAGCCACAAACTAGTCATTGTAAAAGAGCTGT...AGGTTGGCTGGGAAGAAGGGCAAAAGCTGGCACTGGAAAACCGATGCCAATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| 3UTR-3UTR GCA 90 bp | TGGCATCGGTTTTCCAGTGCCAGCTTTTGCCCTTCTTCCCAGCCAACCTCTCGCAAAGATCTCGTTTGTTaGCAACCAAAAACACTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: WHRFSSASFCPSSQPTSRKDLVC*QPKTLL Trigger: CAGCAGTGTTTTTGGTTGGCAACAAACGAGATCTTT...GCGAGAGGTTGGCTGGGAAGAAGGGCAAAAGCTGGCACTGGAAAACCGATGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| 3UTR-3UTR TCA 90 bp | AGTTCACAGAATTGGCATCGGTTTTCCAGTGCCAGCTTTTGCCCTTCTTCCCAGCCAACCTCTCGCACATaGCAAAGATCTCGTTTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: SSQNWHRFSSASFCPSSQPTSRT*QRSRLL Trigger: CAACAAACGAGATCTTTGTCATGTGCGAGAGGTTGG...CTGGGAAGAAGGGCAAAAGCTGGCACTGGAAAACCGATGCCAATTCTGTGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| 3UTR-3UTR TCA 90 bp | ACTGCTCTGCTGCAGACAGTTCACAGAATTGGCATCGGTTTTCCAGTGCCAGCTAACCAAAAACACTGCTaGTTCCACAGCTCTTTTACA | + |
|
Preference number: 2 (lower is better) Translates to: TALLQTVHRIGIGFPVPANQKHC*FHSSFT Trigger: TGTAAAAGAGCTGTGGAATCAGCAGTGTTTTTGGTT...AGCTGGCACTGGAAAACCGATGCCAATTCTGTGAACTGTCTGCAGCAGAGCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| 3UTR-3UTR TCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGCTGTGTGAAGGAGAGTaGGCAGGGTACAACAACCAA | + |
|
Preference number: 2 (lower is better) Translates to: INSHKQSLFGKANWDRCPLCEGE*AGYNNQ Trigger: TTGGTTGTTGTACCCTGCTCACTCTCCTTCACACAG...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| 3UTR-3UTR TCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGATGAAAGGTTCTGTGTaGAGGAGAGTGAGCAGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: INSHKQSLFGKANWDRCPMKGSV*RRVSRV Trigger: TACCCTGCTCACTCTCCTTCACACAGAACCTTTCAT...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| 3UTR-3UTR CCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGTTGAAAACACAGCTGTaGTTCATACTCAATCATTTC | + |
|
Preference number: 2 (lower is better) Translates to: INSHKQSLFGKANWDRCPLKTQL*FILNHF Trigger: GAAATGATTGAGTATGAACCACAGCTGTGTTTTCAA...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| 3UTR GCA 72 bp | TGCAGACAGTTCACAGAATTGGCATCGGTTTTCCAGTaGCAGCTTTTGCCCTTCTTCCCAGCCAACCTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: CRQFTELASVFQ*QLLPFFPANLS Trigger: CGAGAGGTTGGCTGGGAAGAAGGGCAAAAGCTGGCACTGGAAAACCGATGCCAATTCTGTGAACTGTCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCTCTGCTGCAGACAGTTCACAGAATTGGCATCGGTTTTCCAGTGCCAGCTTTTACAATGACTAGTTaGTGGCTCCCGGATTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: TALLQTVHRIGIGFPVPAFTMTS*WLPDSV Trigger: TACAGAATCCGGGAGCCACAAACTAGTCATTGTAAA...AGCTGGCACTGGAAAACCGATGCCAATTCTGTGAACTGTCTGCAGCAGAGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| 3UTR-3UTR CAA 90 bp | TGCTCTGCTGCAGACAGTTCACAGAATTGGCATCGGTTTTCCAGTGCCAGCTTTCAAAGATCTCGTTTGTaGCCAACCAAAAACACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CSAADSSQNWHRFSSASFQRSRL*PTKNTA Trigger: AGCAGTGTTTTTGGTTGGCAACAAACGAGATCTTTG...AAAGCTGGCACTGGAAAACCGATGCCAATTCTGTGAACTGTCTGCAGCAGAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| CDS-3UTR TCA 90 bp | TGGCATCGGTTTTCCAGTGCCAGCTTTTGCCCTTCTTCCCAGCCAACCTCTCGCCCAACCTCTCGCACATaGCAAAGATCTCGTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WHRFSSASFCPSSQPTSRPTSRT*QRSRLL Trigger: CAACAAACGAGATCTTTGTCATGTGCGAGAGGTTGG...GCGAGAGGTTGGCTGGGAAGAAGGGCAAAAGCTGGCACTGGAAAACCGATGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| CDS-3UTR GCA 90 bp | ACTGCTCTGCTGCAGACAGTTCACAGAATTGGCATCGGTTTTCCAGTGCCAGCTGCATCGGTTTTCCAGTaGCAGCTTTTGCCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TALLQTVHRIGIGFPVPAASVFQ*QLLPFF Trigger: GAAGAAGGGCAAAAGCTGGCACTGGAAAACCGATGC...AGCTGGCACTGGAAAACCGATGCCAATTCTGTGAACTGTCTGCAGCAGAGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| CDS-3UTR TCA 90 bp | CAGTTCACAGAATTGGCATCGGTTTTCCAGTGCCAGCTTTTGCCCTTCTTCCCAACAGCTCTTTTACAATaGCTAGTTTGTGGCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: QFTELASVFQCQLLPFFPTALLQ*LVCGSR Trigger: CCGGGAGCCACAAACTAGTCATTGTAAAAGAGCTGT...TGGGAAGAAGGGCAAAAGCTGGCACTGGAAAACCGATGCCAATTCTGTGAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| CDS-3UTR CCA 90 bp | CAGTTCACAGAATTGGCATCGGTTTTCCAGTGCCAGCTTTTGCCCTTCTTCCCAGACAGTTCACAGAATTaGCATCGGTTTTCCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QFTELASVFQCQLLPFFPDSSQN*HRFSSA Trigger: GGCACTGGAAAACCGATGCCAATTCTGTGAACTGTC...TGGGAAGAAGGGCAAAAGCTGGCACTGGAAAACCGATGCCAATTCTGTGAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| CDS-3UTR TCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGAACCCATCTGCCCAGTaGAGCTCACTTGTGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: INSHKQSLFGKANWDRCPNPSAQ*SSLVRE Trigger: CTCCCTCACAAGTGAGCTTCACTGGGCAGATGGGTT...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR TCA 90 bp | TGCTGCAGACAGTTCACAGAATTGGCATCGGTTTTCCAGTGCCAGCTTTTGCCCAACCAAAAACACTGCTaGTTCCACAGCTCTTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: CCRQFTELASVFQCQLLPNQKHC*FHSSFT Trigger: TGTAAAAGAGCTGTGGAATCAGCAGTGTTTTTGGTT...GGGCAAAAGCTGGCACTGGAAAACCGATGCCAATTCTGTGAACTGTCTGCAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| CDS-3UTR GCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGTCCAGTGCCAGCTTTTaGCCTTCTTCCCAGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: INSHKQSLFGKANWDRCPSSASF*PSSQPT Trigger: GGTTGGCTGGGAAGAAGGGCAAAAGCTGGCACTGGA...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR GCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGTCCACCTCCAGAGACTaGTCTGCTGCAGACAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: INSHKQSLFGKANWDRCPSTSRD*SAADSS Trigger: TGAACTGTCTGCAGCAGAGCAGTCTCTGGAGGTGGA...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR CCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGTTTGGCAAGGCAAACTaGGATCGCTGTCCGCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: INSHKQSLFGKANWDRCPFGKAN*DRCPPV Trigger: TACTGGCGGACAGCGATCCCAGTTTGCCTTGCCAAA...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR GCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGTGTAGGGACCAGATTTaGCTGTTCCTTCACCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: INSHKQSLFGKANWDRCPCRDQI*LFLHHP Trigger: TGGGTGGTGAAGGAACAGGCAAATCTGGTCCCTACA...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229002.6 |
||
| CDS-3UTR GCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGGCATCGGTTTTCCAGTaGCAGCTTTTGCCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: INSHKQSLFGKANWDRCPASVFQ*QLLPFF Trigger: GAAGAAGGGCAAAAGCTGGCACTGGAAAACCGATGC...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR GCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGCTCCAGAGACTGCTCTaGTGCAGACAGTTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: INSHKQSLFGKANWDRCPLQRLL*CRQFTE Trigger: TTCTGTGAACTGTCTGCAGCAGAGCAGTCTCTGGAG...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGCCAACCTCTCGCACATGACAAAGATCTCGTTTGTTGCCAACCAAAAAACAATGACTAGTTTGTaGCTCCCGGATTCTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FPANLSHMTKISFVANQKTMTSL*LPDSVD Trigger: ATCTACAGAATCCGGGAGCCACAAACTAGTCATTGT...TTTTTGGTTGGCAACAAACGAGATCTTTGTCATGTGCGAGAGGTTGGCTGGGAA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| CDS-3UTR TCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGACAGCTCTTTTACAATaGCTAGTTTGTGGCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: INSHKQSLFGKANWDRCPTALLQ*LVCGSR Trigger: CCGGGAGCCACAAACTAGTCATTGTAAAAGAGCTGT...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR TCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGCCAACCTCTCGCACATaGCAAAGATCTCGTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: INSHKQSLFGKANWDRCPPTSRT*QRSRLL Trigger: CAACAAACGAGATCTTTGTCATGTGCGAGAGGTTGG...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR GCA 90 bp | AGCCAACCTCTCGCACATGACAAAGATCTCGTTTGTTGCCAACCAAAAACACTGAAAGATCTCGTTTGTTaGCAACCAAAAACACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQPLAHDKDLVCCQPKTLKDLVC*QPKTLL Trigger: CAGCAGTGTTTTTGGTTGGCAACAAACGAGATCTTT...CAGTGTTTTTGGTTGGCAACAAACGAGATCTTTGTCATGTGCGAGAGGTTGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| CDS-3UTR CCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGGACAGTTCACAGAATTaGCATCGGTTTTCCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: INSHKQSLFGKANWDRCPDSSQN*HRFSSA Trigger: GGCACTGGAAAACCGATGCCAATTCTGTGAACTGTC...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR TCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGGATCAATTTGGCCATTaGTTTAGATCCACTGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: INSHKQSLFGKANWDRCPDQFGH*FRSTGT Trigger: CGTCCCAGTGGATCTAAATCAATGGCCAAATTGATC...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR TCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGAGTGAAGCTCACTTGTaGGGGAGAATTTTGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: INSHKQSLFGKANWDRCPSEAHL*GRILLS Trigger: AGAAAGCAAAATTCTCCCTCACAAGTGAGCTTCACT...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR GCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGAATAACAAACCCATCTaGCCAGTGAAGCTCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: INSHKQSLFGKANWDRCPNNKPI*PVKLTC Trigger: ACAAGTGAGCTTCACTGGGCAGATGGGTTTGTTATT...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR CCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGCTGTCAAACTCAGTCTaGCTTCAAGGTACTATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: INSHKQSLFGKANWDRCPLSNSV*LQGTMC Trigger: ACACATAGTACCTTGAAGCCAGACTGAGTTTGACAG...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229002.6 |
||
| CDS-3UTR CCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGACAATGACTAGTTTGTaGCTCCCGGATTCTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: INSHKQSLFGKANWDRCPTMTSL*LPDSVD Trigger: ATCTACAGAATCCGGGAGCCACAAACTAGTCATTGT...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR TCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGAACCAAAAACACTGCTaGTTCCACAGCTCTTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: INSHKQSLFGKANWDRCPNQKHC*FHSSFT Trigger: TGTAAAAGAGCTGTGGAATCAGCAGTGTTTTTGGTT...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR GCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGAAAGATCTCGTTTGTTaGCAACCAAAAACACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: INSHKQSLFGKANWDRCPKDLVC*QPKTLL Trigger: CAGCAGTGTTTTTGGTTGGCAACAAACGAGATCTTT...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR TCA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGTTTTGCAAAAGCAAATaGAGACCTATCACTGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: INSHKQSLFGKANWDRCPFCKSK*RPITDV Trigger: GACATCAGTGATAGGTCTTCATTTGCTTTTGCAAAA...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR CAA 90 bp | TTCCCAGCCAACCTCTCGCACATGACAAAGATCTCGTTTGTTGCCAACCAAAAATTCCAGTGCCAGCTTTaGCCCTTCTTCCCAGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: FPANLSHMTKISFVANQKFQCQL*PFFPAN Trigger: GTTGGCTGGGAAGAAGGGCAAAAGCTGGCACTGGAA...TTTTTGGTTGGCAACAAACGAGATCTTTGTCATGTGCGAGAGGTTGGCTGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| CDS-3UTR CAA 90 bp | TGCTGCAGACAGTTCACAGAATTGGCATCGGTTTTCCAGTGCCAGCTTTTGCCCAGACAGTTCACAGAATaGGCATCGGTTTTCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CCRQFTELASVFQCQLLPRQFTE*ASVFQC Trigger: GCACTGGAAAACCGATGCCAATTCTGTGAACTGTCT...GGGCAAAAGCTGGCACTGGAAAACCGATGCCAATTCTGTGAACTGTCTGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| CDS-3UTR CAA 90 bp | CCCAGCCAACCTCTCGCACATGACAAAGATCTCGTTTGTTGCCAACCAAAAACAACTGTAAGGGCAGATTaGCCTGTTCCTTCACCACCC | + |
|
Preference number: 5 (lower is better) Translates to: PSQPLAHDKDLVCCQPKTTVRAD*PVPSPP Trigger: GGGTGGTGAAGGAACAGGCAAATCTGCCCTTACAGT...TGTTTTTGGTTGGCAACAAACGAGATCTTTGTCATGTGCGAGAGGTTGGCTGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| CDS-3UTR CAA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGTTCCAGTGCCAGCTTTaGCCCTTCTTCCCAGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: INSHKQSLFGKANWDRCPFQCQL*PFFPAN Trigger: GTTGGCTGGGAAGAAGGGCAAAAGCTGGCACTGGAA...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR CAA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGACTGTAAGGGCAGATTaGCCTGTTCCTTCACCACCC | + |
|
Preference number: 5 (lower is better) Translates to: INSHKQSLFGKANWDRCPTVRAD*PVPSPP Trigger: GGGTGGTGAAGGAACAGGCAAATCTGCCCTTACAGT...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000538724.6 |
||
| CDS-3UTR CAA 90 bp | AGCCAACCTCTCGCACATGACAAAGATCTCGTTTGTTGCCAACCAAAAACACTGTTTACAATGACTAGTTaGTGGCTCCCGGATTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SQPLAHDKDLVCCQPKTLFTMTS*WLPDSV Trigger: TACAGAATCCGGGAGCCACAAACTAGTCATTGTAAA...CAGTGTTTTTGGTTGGCAACAAACGAGATCTTTGTCATGTGCGAGAGGTTGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| CDS TCA 90 bp | TTGTGGCTCCCGGATTCTGTAGATCAGCGCTTTTGCAAAAGCAAATaGAGACCTATCACTGATGTCATACACAATAACAAACCCATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LWLPDSVDQRFCKSK*RPITDVIHNNKPIC Trigger: GCAGATGGGTTTGTTATTGTGTATGACATCAGTGATAGGTCTTCATTTGCTTTTGCAAAAGCGCTGATCTACAGAATCCGGGAGCCACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000229002.6 ENST00000538724.6 ENST00000540148.5 ENST00000541632.1 |
||
| CDS-3UTR CAA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGAGACAGTTCACAGAATaGGCATCGGTTTTCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: INSHKQSLFGKANWDRCPRQFTE*ASVFQC Trigger: GCACTGGAAAACCGATGCCAATTCTGTGAACTGTCT...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR CAA 90 bp | TTCCCAGCCAACCTCTCGCACATGACAAAGATCTCGTTTGTTGCCAACCAAAAATTCTGTAGATCAGCGTaGAGAACAAGGGTCATATAT | + |
|
Preference number: 5 (lower is better) Translates to: FPANLSHMTKISFVANQKFCRSA*RTRVIY Trigger: ATATATGACCCTTGTTCTCAACGCTGATCTACAGAA...TTTTTGGTTGGCAACAAACGAGATCTTTGTCATGTGCGAGAGGTTGGCTGGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000536890.1 |
||
| CDS-3UTR CAA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGTGTAGATCAGCGCTTTaGCAAAAGCAAATGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: INSHKQSLFGKANWDRCPCRSAL*QKQMKT Trigger: GGTCTTCATTTGCTTTTGCAAAAGCGCTGATCTACA...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR CAA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGTTTACAATGACTAGTTaGTGGCTCCCGGATTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: INSHKQSLFGKANWDRCPFTMTS*WLPDSV Trigger: TACAGAATCCGGGAGCCACAAACTAGTCATTGTAAA...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR CAA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGCAAAGATCTCGTTTGTaGCCAACCAAAAACACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: INSHKQSLFGKANWDRCPQRSRL*PTKNTA Trigger: AGCAGTGTTTTTGGTTGGCAACAAACGAGATCTTTG...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR CAA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGGGACGTCTCTTTTCTTaGAGTTTGAAGTTTATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: INSHKQSLFGKANWDRCPGRLFS*SLKFIR Trigger: CCTGATAAACTTCAAACTCAAAGAAAAGAGACGTCC...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR CAA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGATAAACAGAGTTTATTaGGCAAGGCAAACTGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: INSHKQSLFGKANWDRCPINRVY*ARQTGI Trigger: GATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTAT...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS-3UTR CAA 90 bp | ATAAATTCACATAAACAGAGTTTATTTGGCAAGGCAAACTGGGATCGCTGTCCGCTCTTTTCTTTGAGTTaGAAGTTTATCAGGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: INSHKQSLFGKANWDRCPLFSLS*KFIRMS Trigger: GGACATCCTGATAAACTTCAAACTCAAAGAAAAGAG...CGGACAGCGATCCCAGTTTGCCTTGCCAAATAAACTCTGTTTATGTGAATTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000229002.6 ENST00000538724.6 |
||
| CDS CAA 90 bp | CATTTCCACCTCCAGAGACTGCTCTGCTGCAGACAGTTCACAGAATaGGCATCGGTTTTCCAGTGCCAGCTTTTGCCCTTCTTCCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: HFHLQRLLCCRQFTE*ASVFQCQLLPFFPA Trigger: GGCTGGGAAGAAGGGCAAAAGCTGGCACTGGAAAACCGATGCCAATTCTGTGAACTGTCTGCAGCAGAGCAGTCTCTGGAGGTGGAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000229002.6 ENST00000538724.6 ENST00000540148.5 |
||
| CDS CCA 72 bp | AACCTCACTGTAAGGGCCTGTATTTCACTCCATACTTaGCTACCTTCCCCTTGCTCGTCAGACTCTCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: NLTVRACISLHT*LPSPCSSDSPP Trigger: GGGAGGAGAGTCTGACGAGCAAGGGGAAGGTAGCCAAGTATGGAGTGAAATACAGGCCCTTACAGTGAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540148.5 |
||
| CDS GCA 72 bp | CCTATCACTGATGTCATACACAATAACAAACCCATCTaGCCAGTGAAGCTCACTTGTGAGGGAGAATTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PITDVIHNNKPI*PVKLTCEGEFC Trigger: GCAAAATTCTCCCTCACAAGTGAGCTTCACTGGGCAGATGGGTTTGTTATTGTGTATGACATCAGTGATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000229002.6 ENST00000538724.6 ENST00000540148.5 ENST00000541632.1 |
||
| CDS CAA 90 bp | CTTCAAGGTACTATGTGTAATAGTCACAAAGACACTACCAAGTATTaGCAGTTATTTAAGGATGTAGGGACCAGATTTGCCTGTTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LQGTMCNSHKDTTKY*QLFKDVGTRFACSF Trigger: GAAGGAACAGGCAAATCTGGTCCCTACATCCTTAAATAACTGCAAATACTTGGTAGTGTCTTTGTGACTATTACACATAGTACCTTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229002.6 |
||
| CDS CAA 72 bp | ACTATGTGTAATAGTCACAAAGACACTACCAAGTATTaGCAGTTATTTAAGGATGTAGGGACCAGATTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TMCNSHKDTTKY*QLFKDVGTRFA Trigger: GGCAAATCTGGTCCCTACATCCTTAAATAACTGCAAATACTTGGTAGTGTCTTTGTGACTATTACACATAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000229002.6 |
||
| CDS CAA 72 bp | GCCATTGATTTAGATCCACTGGGACGTCTCTTTTCTTaGAGTTTGAAGTTTATCAGGATGTCCTTGATAATT | + |
|
Preference number: 6 (lower is better) Translates to: AIDLDPLGRLFS*SLKFIRMSLII Trigger: AATTATCAAGGACATCCTGATAAACTTCAAACTCAAAGAAAAGAGACGTCCCAGTGGATCTAAATCAATGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000229002.6 ENST00000538724.6 ENST00000540148.5 |
||
| CDS CAA 90 bp | TTGGCCATTGATTTAGATCCACTGGGACGTCTCTTTTCTTTGAGTTaGAAGTTTATCAGGATGTCCTTGATAATTCTGATAAACATCATT | + |
|
Preference number: 6 (lower is better) Translates to: LAIDLDPLGRLFSLS*KFIRMSLIILINII Trigger: AATGATGTTTATCAGAATTATCAAGGACATCCTGATAAACTTCAAACTCAAAGAAAAGAGACGTCCCAGTGGATCTAAATCAATGGCCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000229002.6 ENST00000538724.6 ENST00000540148.5 |
||
| CDS CAA 90 bp | ATCAATTTGGCCATTGATTTAGATCCACTGGGACGTCTCTTTTCTTaGAGTTTGAAGTTTATCAGGATGTCCTTGATAATTCTGATAAAC | + |
|
Preference number: 6 (lower is better) Translates to: INLAIDLDPLGRLFS*SLKFIRMSLIILIN Trigger: GTTTATCAGAATTATCAAGGACATCCTGATAAACTTCAAACTCAAAGAAAAGAGACGTCCCAGTGGATCTAAATCAATGGCCAAATTGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000229002.6 ENST00000538724.6 ENST00000540148.5 |
||
| CDS CCA 72 bp | TTTGACATCTGTTTATTTTCTCTGTCAAACTCAGTCTaGCTTCAAGGTACTATGTGTAATAGTCACAAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: FDICLFSLSNSV*LQGTMCNSHKD Trigger: GTCTTTGTGACTATTACACATAGTACCTTGAAGCCAGACTGAGTTTGACAGAGAAAATAAACAGATGTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000229002.6 |
||