RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RERE (Homo sapiens)

Ensembl gene IDs: ENSG00000142599

Ensembl transcript IDs: ENST00000337907.7, ENST00000377464.5, ENST00000400907.6, ENST00000400908.7, ENST00000460659.5, ENST00000464367.1, ENST00000464972.5, ENST00000465125.1, ENST00000468247.1, ENST00000469251.1, ENST00000476556.5, ENST00000480342.5, ENST00000488215.5, ENST00000492766.5, ENST00000505225.1, ENST00000507012.1, ENST00000514428.1, ENST00000656437.1, ENST00000659924.1

Found 1378 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGGGCCGACAGAGGGCAGACACCCCAGAACACCCGCCCTCAGCCTaGGAGAAAGTGCGTTACGGCTGCAGCCTGGAAACGAGGGCAGGC +
Preference number: 1 (lower is better)
Translates to: QGRQRADTPEHPPSA*EKVRYGCSLETRAG
Trigger: GCCTGCCCTCGTTTCCAGGCTGCAGCCGTAACGCACTTTCTCCCAGGCTGAGGGCGGGTGTTCTGGGGTGTCTGCCCTCTGTCGGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR GCA 90 bp ACCCCAGAACACCCGCCCTCAGCCTGGGAGAAAGTGCGTTACGGCTaGAGCCTGGAAACGAGGGCAGGCTCTCTCCAGGACGGTTCCGCT +
Preference number: 1 (lower is better)
Translates to: TPEHPPSAWEKVRYG*SLETRAGSLQDGSA
Trigger: AGCGGAACCGTCCTGGAGAGAGCCTGCCCTCGTTTCCAGGCTGCAGCCGTAACGCACTTTCTCCCAGGCTGAGGGCGGGTGTTCTGGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 90 bp AACACCCGCCCTCAGCCTGGGAGAAAGTGCGTTACGGCTGCAGCCTaGAAACGAGGGCAGGCTCTCTCCAGGACGGTTCCGCTCAGAAGG +
Preference number: 1 (lower is better)
Translates to: NTRPQPGRKCVTAAA*KRGQALSRTVPLRR
Trigger: CCTTCTGAGCGGAACCGTCCTGGAGAGAGCCTGCCCTCGTTTCCAGGCTGCAGCCGTAACGCACTTTCTCCCAGGCTGAGGGCGGGTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 90 bp AGACCTCCAGTGTCTGAGAGAAAAGGATCGGAAGAGGCCACGTCCTaGCAGGAAGCAGGGCCGACAGAGGGCAGACACCCCAGAACACCC +
Preference number: 1 (lower is better)
Translates to: RPPVSERKGSEEATS*QEAGPTEGRHPRTP
Trigger: GGGTGTTCTGGGGTGTCTGCCCTCTGTCGGCCCTGCTTCCTGCCAGGACGTGGCCTCTTCCGATCCTTTTCTCTCAGACACTGGAGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 90 bp AGAAAAACCAGAAGCCGAGAAGGTGGGGGCCTGGATGCAGGAGTCTaGGAGCCCAGCAGGAAGAGGCCTCGCTCAGAGCCACGGGAACAA +
Preference number: 1 (lower is better)
Translates to: RKTRSREGGGLDAGV*EPSRKRPRSEPREQ
Trigger: TTGTTCCCGTGGCTCTGAGCGAGGCCTCTTCCTGCTGGGCTCCCAGACTCCTGCATCCAGGCCCCCACCTTCTCGGCTTCTGGTTTTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR TCA 90 bp AGAGTCTGTAACATCGTCCCTGCAAACCCTGGATGCTCGCTGCTGTaGCCAGGCCTCGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTT +
Preference number: 1 (lower is better)
Translates to: RVCNIVPANPGCSLL*PGLGPSLCPCGTPL
Trigger: AAGGGGCGTTCCACATGGACAGAGGCTTGGACCGAGGCCTGGTCACAGCAGCGAGCATCCAGGGTTTGCAGGGACGATGTTACAGACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR CCA 90 bp GGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTaGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGT +
Preference number: 1 (lower is better)
Translates to: GFQIPMPPICKPRGL*STRGGVCQCVCTHS
Trigger: ACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR CCA 90 bp CTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTaGTCTCTGTCCTACAATTCTTGGGATGGGACCAGCACAATGGCA +
Preference number: 1 (lower is better)
Translates to: LRPGSWMDFVSADPV*SLSYNSWDGTSTMA
Trigger: TGCCATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGAGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTaGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCAC +
Preference number: 1 (lower is better)
Translates to: SSWIPNSYAPDLQAS*ALEHSWRSVSVCLH
Trigger: GTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR CCA 90 bp TCAAACTATCAGCATCTCTTCCTGCTCCCTCTGCGGCCTGGGTCCTaGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTCTGTCCTAC +
Preference number: 1 (lower is better)
Translates to: SNYQHLFLLPLRPGS*MDFVSADPVWSLSY
Trigger: GTAGGACAGAGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGGGAGCAGGAAGAGATGCTGATAGTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR TCA 90 bp TCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTaGGAGAAAAGGATCGGAAGAGGCCACGTCCTGGCAGGAAGCAGG +
Preference number: 1 (lower is better)
Translates to: SWDGTSTMAEETSSV*EKRIGRGHVLAGSR
Trigger: CCTGCTTCCTGCCAGGACGTGGCCTCTTCCGATCCTTTTCTCTCAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR GCA 90 bp GCCAGTAGCTGCTGGTTTCTAGATCAAACTATCAGCATCTCTTCCTaGTCCCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCG +
Preference number: 1 (lower is better)
Translates to: ASSCWFLDQTISISS*SLCGLGPGWTLCPP
Trigger: CGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGGGAGCAGGAAGAGATGCTGATAGTTTGATCTAGAAACCAGCAGCTACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 90 bp ACTATCAGCATCTCTTCCTGCTCCCTCTGCGGCCTGGGTCCTGGATaGACTTTGTGTCCGCCGACCCAGTGTGGTCTCTGTCCTACAATT +
Preference number: 1 (lower is better)
Translates to: TISISSCSLCGLGPG*TLCPPTQCGLCPTI
Trigger: AATTGTAGGACAGAGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGGGAGCAGGAAGAGATGCTGATAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR TCA 90 bp AACGTAGCAAATCCGAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTaGAGCTCAACCTCGAGGACACCGAACAAGATACGGACACACACA +
Preference number: 1 (lower is better)
Translates to: NVANPSVHAASAAVE*SSTSRTPNKIRTHT
Trigger: TGTGTGTGTCCGTATCTTGTTCGGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTCGGATTTGCTACGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR TCA 90 bp GATGTCTGTGCTGCTGGCAGAGCACAGGCTAGGAGCAGACACAAGTaGAACGCCAGGCAGAAAACAGAGTCTGTAACATCGTCCCTGCAA +
Preference number: 1 (lower is better)
Translates to: DVCAAGRAQARSRHK*NARQKTESVTSSLQ
Trigger: TTGCAGGGACGATGTTACAGACTCTGTTTTCTGCCTGGCGTTTCACTTGTGTCTGCTCCTAGCCTGTGCTCTGCCAGCAGCACAGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR CCA 90 bp ATGCACTGTGGGTGGGACTCCAGTTCCCACTTCCAGGATGAAGAGTaGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCATGCAG +
Preference number: 1 (lower is better)
Translates to: MHCGWDSSSHFQDEE*DSNGLPVQCGVTMQ
Trigger: CTGCATGGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTGGGAACTGGAGTCCCACCCACAGTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 90 bp GGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATaGGGCCGTCCTCACCACAAGATCCAAGTGACAATGCGCATGAGA +
Preference number: 1 (lower is better)
Translates to: GSPLLKSGLNLWQER*GRPHHKIQVTMRMR
Trigger: TCTCATGCGCATTGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR TCA 90 bp TTTCTGAATGCACTGTGGGTGGGACTCCAGTTCCCACTTCCAGGATaGAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCAC +
Preference number: 1 (lower is better)
Translates to: FLNALWVGLQFPLPG*RVGLKWFTSAMWGH
Trigger: GTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTGGGAACTGGAGTCCCACCCACAGTGCATTCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 90 bp GTCTTAACTCCAGGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTaGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGACA +
Preference number: 1 (lower is better)
Translates to: VLTPGSPLLKSGLNL*QERWGRPHHKIQVT
Trigger: TGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTGGAGTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 90 bp GAAGCTTTCTGGATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTaGGGGACTGTCATGCAGGGAGATCCAAACCAGTCTCAGGAAATC +
Preference number: 1 (lower is better)
Translates to: EAFWMFSPVQDSLSF*GTVMQGDPNQSQEI
Trigger: GATTTCCTGAGACTGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATCCAGAAAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR TCA 90 bp AGGAAAATCCGAAGGAAACCGAGTGGTTGGGCTTCAAAGACACCATaGAGGTCAGGGCCTCCTAAACAAACTGTAGTTTATCTGGTGAGG +
Preference number: 1 (lower is better)
Translates to: RKIRRKPSGWASKTP*RSGPPKQTVVYLVR
Trigger: CCTCACCAGATAAACTACAGTTTGTTTAGGAGGCCCTGACCTTCATGGTGTCTTTGAAGCCCAACCACTCGGTTTCCTTCGGATTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 90 bp AACAATCAAGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATaGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGT +
Preference number: 1 (lower is better)
Translates to: NNQVCVHRNLEGNLQ*TQAHALSIPWKQNS
Trigger: ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACTTGATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
3UTR-3UTR CCA 90 bp CCTGCCATGAGGGCCTGTCCCCACCCCAGAAGGAAACGAATGCCTTCAAGCCAAGTTACGGCTGCAGCCTaGAAACGAGGGCAGGCTCTC +
Preference number: 2 (lower is better)
Translates to: PAMRACPHPRRKRMPSSQVTAAA*KRGQAL
Trigger: GAGAGCCTGCCCTCGTTTCCAGGCTGCAGCCGTAAC...TTGGCTTGAAGGCATTCGTTTCCTTCTGGGGTGGGGACAGGCCCTCATGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CAA 90 bp AGCATCTCTTCCTGCTCCCTCTGCGGCCTGGGTCCTGGATGGACTTaGTGTCCGCCGACCCAGTGTGGTCTCTGTCCTACAATTCTTGGG +
Preference number: 2 (lower is better)
Translates to: SISSCSLCGLGPGWT*CPPTQCGLCPTILG
Trigger: CCCAAGAATTGTAGGACAGAGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGGGAGCAGGAAGAGATGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR TCA 90 bp TGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGGATGCTCGCTGCTGTaGCCAGGCCTCGGTCCAAGC +
Preference number: 2 (lower is better)
Translates to: WPQSVARKMGPSSPQDPSGCSLL*PGLGPS
Trigger: GCTTGGACCGAGGCCTGGTCACAGCAGCGAGCATCC...ACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGGACTCACTAAGTTTCTaGGGGACTGTCATGCAGGGA +
Preference number: 2 (lower is better)
Translates to: YAPDLQASWALEHSWRSVDSLSF*GTVMQG
Trigger: TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTC...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR CCA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTGCGCTTTCCATCCCGTaGAAACAGAACAGTGACACT +
Preference number: 2 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSALSIP*KQNSDT
Trigger: AGTGTCACTGTTCTGTTTCCACGGGATGGAAAGCGC...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR TCA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGAGACCTCCAGTGTCTaGGAGAAAAGGATCGGAAGA +
Preference number: 2 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTETSSV*EKRIGR
Trigger: TCTTCCGATCCTTTTCTCTCAGACACTGGAGGTCTC...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR GCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGGCCAAACCCCAAGATTaGAGGGAAGCTTTCTGGATG +
Preference number: 2 (lower is better)
Translates to: VGSGALVAECVSVSARTVAKPQD*REAFWM
Trigger: CATCCAGAAAGCTTCCCTGCAATCTTGGGGTTTGGC...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR GCA 90 bp ATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCACCCTGGATGCTCGCTaGTGTGACCAGGCCTCGGTC +
Preference number: 2 (lower is better)
Translates to: ISLAQKWPQSVARKMGPSTLDAR*CDQASV
Trigger: GACCGAGGCCTGGTCACAGCAGCGAGCATCCAGGGT...GGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGAAGCCTCGTGGGCTCTaGAGCACTCGTGGCGGAGTG +
Preference number: 2 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGKPRGL*STRGGV
Trigger: CACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTT...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR CCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACAAGCCTCGTGGGCTCTaGAGCACTCGTGGCGGAGTG +
Preference number: 2 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHKPRGL*STRGGV
Trigger: CACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTT...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR TCA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTGTGGAAACAGAACAGTaGCACTGGAGAACAGAAAGT +
Preference number: 2 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSVETEQ*HWRTES
Trigger: ACTTTCTGTTCTCCAGTGTCACTGTTCTGTTTCCAC...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR GCA 90 bp CCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGAACAAGATACGGAAAAGTGCGTTACGGCTaGAGCCTGGAAACGAGGGCA +
Preference number: 2 (lower is better)
Translates to: PLPQWSEAQPRGHRTRYGKVRYG*SLETRA
Trigger: TGCCCTCGTTTCCAGGCTGCAGCCGTAACGCACTTT...TCCGTATCTTGTTCGGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR GCA 90 bp CGTGCATCTACACTTGGGCCAGCACATTGCAGATGCTCAACAGCCACAAGAGACCTCCCGCCTACCCCATaGAGGATGGCTATCCCCATG +
Preference number: 2 (lower is better)
Translates to: RASTLGPAHCRCSTATRDLPPTP*RMAIPM
Trigger: CATGGGGATAGCCATCCTGCATGGGGTAGGCGGGAG...GTCTCTTGTGGCTGTTGAGCATCTGCAATGTGCTGGCCCAAGTGTAGATGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR-3UTR CCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGAAGCCTCGTGGGCTCTaGAGCACTCGTGGCGGAGTG +
Preference number: 2 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLKPRGL*STRGGV
Trigger: CACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTT...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CCA 90 bp TGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGATCTGCAAGCCTCGTaGGCTCTGGAGCACTCGTGG +
Preference number: 2 (lower is better)
Translates to: WPQSVARKMGPSSPQDPSDLQAS*ALEHSW
Trigger: CCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATC...ACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CCA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCACTCCCTGTGCAAAATaGAAGAGGTCTGATGGAGCA +
Preference number: 2 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTTPCAK*KRSDGA
Trigger: TGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGT...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CAA 90 bp GGACTTTGTGTCCGCCGACCCAGTGTGGTCTCTGTCCTACAATTCTaGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTG +
Preference number: 2 (lower is better)
Translates to: GLCVRRPSVVSVLQF*GWDQHNGRRDLQCL
Trigger: CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGAGACCACACTGGGTCGGCGGACACAAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR GCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGTGTCAGTGTGTCTaGACGCACAGTGAAGGGTGT +
Preference number: 2 (lower is better)
Translates to: DSKFLCPRSASLVGSGALVCQCV*THSEGC
Trigger: ACACCCTTCACTGTGCGTGCAGACACACTGACACAC...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR GCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGGTGTGTCAGTGTGTCTaGACGCACAGTGAAGGGTGT +
Preference number: 2 (lower is better)
Translates to: IPNSYAPDLQASWALEHSVCQCV*THSEGC
Trigger: ACACCCTTCACTGTGCGTGCAGACACACTGACACAC...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR GCA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCCCTATGCCCCCGATCTaGAAGCCTCGTGGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVPMPPI*KPRGLW
Trigger: CCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGG...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR GCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACACCTATGCCCCCGATCTaGAAGCCTCGTGGGCTCTGG +
Preference number: 2 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTPMPPI*KPRGLW
Trigger: CCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGG...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR GCA 90 bp CCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGAACAAGATACGGAAGCCCCCACACAGCATaGTTTCTGAATGCACTGTGG +
Preference number: 2 (lower is better)
Translates to: PLPQWSEAQPRGHRTRYGSPHTA*FLNALW
Trigger: CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCT...TCCGTATCTTGTTCGGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CCA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTGACTCACTAAGTTTCTaGGGGACTGTCATGCAGGGA +
Preference number: 2 (lower is better)
Translates to: SGALVAECVSVSARTVKGDSLSF*GTVMQG
Trigger: TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTC...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR CCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACGCTCTGGAGCACTCGTaGCGGAGTGTGTCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHALEHS*RSVSVC
Trigger: ACACACTGACACACTCCGCCACGAGTGCTCCAGAGC...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR CCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCAAGCCTCGTGGGCTCTaGAGCACTCGTGGCGGAGTG +
Preference number: 2 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTKPRGL*STRGGV
Trigger: CACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTT...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR TCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGGGATGCTCGCTGCTGTaGCCAGGCCTCGGTCCAAGC +
Preference number: 2 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKGCSLL*PGLGPS
Trigger: GCTTGGACCGAGGCCTGGTCACAGCAGCGAGCATCC...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR GCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGGCCAAACCCCAAGATTaGAGGGAAGCTTTCTGGATG +
Preference number: 2 (lower is better)
Translates to: IPNSYAPDLQASWALEHSAKPQD*REAFWM
Trigger: CATCCAGAAAGCTTCCCTGCAATCTTGGGGTTTGGC...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR GCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGTGTGTCAGTGTGTCTaGACGCACAGTGAAGGGTGT +
Preference number: 2 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGVCQCV*THSEGC
Trigger: ACACCCTTCACTGTGCGTGCAGACACACTGACACAC...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR GCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATACCCTGGATGCTCGCTaGTGTGACCAGGCCTCGGTC +
Preference number: 2 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYTLDAR*CDQASV
Trigger: GACCGAGGCCTGGTCACAGCAGCGAGCATCCAGGGT...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
3UTR-3UTR CCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGGACTCACTAAGTTTCTaGGGGACTGTCATGCAGGGA +
Preference number: 2 (lower is better)
Translates to: IPNSYAPDLQASWALEHSDSLSF*GTVMQG
Trigger: TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTC...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR CCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTGATCTGCAAGCCTCGTaGGCTCTGGAGCACTCGTGG +
Preference number: 2 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSDLQAS*ALEHSW
Trigger: CCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATC...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR CCA 90 bp ATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCAAGCCTCTGTCCATGTaGAACGCCCCTTTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: ISLAQKWPQSVARKMGPSKPLSM*NAPLLP
Trigger: AGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTT...GGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACACGTCCCTGCAAACCCTaGATGCTCGCTGCTGTGACC +
Preference number: 2 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTRPCKP*MLAAVT
Trigger: GGTCACAGCAGCGAGCATCCAGGGTTTGCAGGGACG...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR GCA 90 bp TCTGTCCTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGATGGACACAGGCCCATaGGCTTTCCATCCCGTGGAA +
Preference number: 2 (lower is better)
Translates to: SVLQFLGWDQHNGRRDLQMDTGP*AFHPVE
Trigger: TTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCAT...CTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CCA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCGCTCTGGAGCACTCGTaGCGGAGTGTGTCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVALEHS*RSVSVC
Trigger: ACACACTGACACACTCCGCCACGAGTGCTCCAGAGC...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CCA 90 bp CCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGAACAAGATACGGAACTCCCTGTGCAAAATaGAAGAGGTCTGATGGAGCA +
Preference number: 2 (lower is better)
Translates to: PLPQWSEAQPRGHRTRYGTPCAK*KRSDGA
Trigger: TGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGT...TCCGTATCTTGTTCGGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR TCA 90 bp CTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGACAATGCGCAAAATGGAAGAGGTCTaGTGGAGCAGATGTCTGTGC +
Preference number: 2 (lower is better)
Translates to: LWQERWGRPHHKIQVTMRKMEEV*WSRCLC
Trigger: GCACAGACATCTGCTCCATCAGACCTCTTCCATTTT...GCGCATTGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR TCA 90 bp ATTCGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGGAACCTTCCGTCAGCTCCTaGTACAGGAGGGGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: IRPNAKVLKICPTSQTREPSVSS*YRRGSW
Trigger: CCAGGAGCCCCTCCTGTATCAGGAGCTGACGGAAGG...TTCCCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR-3UTR GCA 90 bp TGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGATTCCAAATTCCTATaGCCCCGATCTGCAAGCCTC +
Preference number: 2 (lower is better)
Translates to: WPQSVARKMGPSSPQDPSDSKFL*PRSASL
Trigger: GAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC...ACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR GCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGGATTCCAAATTCCTATaGCCCCGATCTGCAAGCCTC +
Preference number: 2 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGDSKFL*PRSASL
Trigger: GAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR GCA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCCGTAAAAAGCCATGCTaGAGAACTTTCTCCAATTAT +
Preference number: 2 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTRKKPC*RTFSNY
Trigger: ATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACG...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGCGTCCCTGCAAACCCTaGATGCTCGCTGCTGTGACC +
Preference number: 2 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKRPCKP*MLAAVT
Trigger: GGTCACAGCAGCGAGCATCCAGGGTTTGCAGGGACG...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CCA 90 bp CAGGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGCGCTTTCCATCCCGTaGAAACAGAACAGTGACACT +
Preference number: 2 (lower is better)
Translates to: QDLPCSKVASICGKKDGAALSIP*KQNSDT
Trigger: AGTGTCACTGTTCTGTTTCCACGGGATGGAAAGCGC...GGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGCAGAAGCCGAGAAGGTaGGGGCCTGGATGCAGGAGT +
Preference number: 2 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKQKPRR*GPGCRS
Trigger: ACTCCTGCATCCAGGCCCCCACCTTCTCGGCTTCTG...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CCA 90 bp CGTGCATCTACACTTGGGCCAGCACATTGCAGATGCTCAACAGCCACAAGAGACAGCCTCCCAAAGAGTTaGGATTATGGCATGAGCCAC +
Preference number: 2 (lower is better)
Translates to: RASTLGPAHCRCSTATRDSLPKS*DYGMSH
Trigger: GTGGCTCATGCCATAATCCCAACTCTTTGGGAGGCT...GTCTCTTGTGGCTGTTGAGCATCTGCAATGTGCTGGCCCAAGTGTAGATGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR-3UTR TCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGAGGAGCAGACACAAGTaGAACGCCAGGCAGAAAACA +
Preference number: 2 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAERSRHK*NARQKT
Trigger: TGTTTTCTGCCTGGCGTTTCACTTGTGTCTGCTCCT...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
3UTR-3UTR CCA 90 bp ACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCATGCAGACCTGCCCCTAGGGTGAAGGGTGTGAACTaGATTCTAGCACCTACTGAG +
Preference number: 2 (lower is better)
Translates to: TQMVYQCNVGSPCRPAPRVKGVN*ILAPTE
Trigger: CTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCAC...CCTAGGGGCAGGTCTGCATGGTGACCCCACATTGCACTGGTAAACCATTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATGATCTGCAAGCCTCGTaGGCTCTGGAGCACTCGTGG +
Preference number: 2 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNDLQAS*ALEHSW
Trigger: CCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATC...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
3UTR-3UTR CCA 90 bp TGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGAAGGAAATCTACAATaGACACAGGCCCATGCGCTT +
Preference number: 2 (lower is better)
Translates to: WPQSVARKMGPSSPQDPSEGNLQ*TQAHAL
Trigger: AAGCGCATGGGCCTGTGTCCATTGTAGATTTCCTTC...ACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CCA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCAGTGGCCTCAATCTGTaGCAAGAAAGATGGGGCCGT +
Preference number: 2 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVSGLNL*QERWGR
Trigger: ACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACT...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CCA 90 bp CCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGAACAAGATACGGATTCCAGGATGAAGAGTaGGACTCAAATGGTTTACCA +
Preference number: 2 (lower is better)
Translates to: PLPQWSEAQPRGHRTRYGFQDEE*DSNGLP
Trigger: TGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA...TCCGTATCTTGTTCGGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CCA 90 bp TCTGTCCTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTTTCTGAATGCACTGTaGGTGGGACTCCAGTTCCCA +
Preference number: 2 (lower is better)
Translates to: SVLQFLGWDQHNGRRDLQFLNAL*VGLQFP
Trigger: TGGGAACTGGAGTCCCACCCACAGTGCATTCAGAAA...CTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR TCA 90 bp AGAAGGCAGCCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGAAAATGGAAGAGGTCTaGTGGAGCAGATGTCTGTGC +
Preference number: 2 (lower is better)
Translates to: RRQPSNTSLWQAYVLGHLKMEEV*WSRCLC
Trigger: GCACAGACATCTGCTCCATCAGACCTCTTCCATTTT...CAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGGCTGCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR GCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGCCAAACCCCAAGATTaGAGGGAAGCTTTCTGGATG +
Preference number: 2 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTAKPQD*REAFWM
Trigger: CATCCAGAAAGCTTCCCTGCAATCTTGGGGTTTGGC...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR GCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTGCCAAACCCCAAGATTaGAGGGAAGCTTTCTGGATG +
Preference number: 2 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSAKPQD*REAFWM
Trigger: CATCCAGAAAGCTTCCCTGCAATCTTGGGGTTTGGC...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR GCA 90 bp CCTGCCATGAGGGCCTGTCCCCACCCCAGAAGGAAACGAATGCCTTCAAGCCAACGTAAAAAGCCATGCTaGAGAACTTTCTCCAATTAT +
Preference number: 2 (lower is better)
Translates to: PAMRACPHPRRKRMPSSQRKKPC*RTFSNY
Trigger: ATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACG...TTGGCTTGAAGGCATTCGTTTCCTTCTGGGGTGGGGACAGGCCCTCATGGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR GCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATATGGACACAGGCCCATaGGCTTTCCATCCCGTGGAA +
Preference number: 2 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYMDTGP*AFHPVE
Trigger: TTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCAT...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
3UTR-3UTR GCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGCAAATGGTTTACCAGTaGAATGTGGGGTCACCATGC +
Preference number: 2 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLQMVYQ*NVGSPC
Trigger: GCATGGTGACCCCACATTGCACTGGTAAACCATTTG...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR GCA 90 bp CGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGGAAACTGACAGGGTCTTGCTCTaGCACCTAGGCTACAGTGGT +
Preference number: 2 (lower is better)
Translates to: RPNAKVLKICPTSQTRETDRVLL*HLGYSG
Trigger: ACCACTGTAGCCTAGGTGGCAGAGCAAGACCCTGTC...AGTTTCCCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR-3UTR CCA 90 bp TCTGTCCTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGACTCCCTGTGCAAAATaGAAGAGGTCTGATGGAGCA +
Preference number: 2 (lower is better)
Translates to: SVLQFLGWDQHNGRRDLQTPCAK*KRSDGA
Trigger: TGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGT...CTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR TCA 90 bp CCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGAACAAGATACGGAGATTCTAGCACCTACTaGGAAATCAAGGAAAAGAAA +
Preference number: 2 (lower is better)
Translates to: PLPQWSEAQPRGHRTRYGDSSTY*EIKEKK
Trigger: TTTCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATC...TCCGTATCTTGTTCGGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR TCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTAAAATGGAAGAGGTCTaGTGGAGCAGATGTCTGTGC +
Preference number: 2 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSKMEEV*WSRCLC
Trigger: GCACAGACATCTGCTCCATCAGACCTCTTCCATTTT...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR TCA 90 bp TCTGTCCTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGGTGGAAACAGAACAGTaGCACTGGAGAACAGAAAGT +
Preference number: 2 (lower is better)
Translates to: SVLQFLGWDQHNGRRDLQVETEQ*HWRTES
Trigger: ACTTTCTGTTCTCCAGTGTCACTGTTCTGTTTCCAC...CTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR TCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGACACAGCATGCTTTCTaGATGCACTGTGGGTGGGAC +
Preference number: 2 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKTQHAF*MHCGWD
Trigger: GTCCCACCCACAGTGCATTCAGAAAGCATGCTGTGT...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR GCA 90 bp TGCAGATGCTCAACAGCCACAAGAGACCAGTGGTTACCACATTGGAAAGCACAGACCACAAGGCTACGCTaGTGGCTTTTGTTTGGAACA +
Preference number: 2 (lower is better)
Translates to: CRCSTATRDQWLPHWKAQTTRLR*WLLFGT
Trigger: TGTTCCAAACAAAAGCCAGCAGCGTAGCCTTGTGGT...CTGTGCTTTCCAATGTGGTAACCACTGGTCTCTTGTGGCTGTTGAGCATCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR-3UTR CCA 90 bp ATTCGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGGAACACAGCTGGATACAATaGGCTGCATGCAGAGGGGAG +
Preference number: 2 (lower is better)
Translates to: IRPNAKVLKICPTSQTREHSWIQ*AACRGE
Trigger: CTCCCCTCTGCATGCAGCCCATTGTATCCAGCTGTG...TTCCCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR-3UTR TCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATAGGAGCAGACACAAGTaGAACGCCAGGCAGAAAACA +
Preference number: 2 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYRSRHK*NARQKT
Trigger: TGTTTTCTGCCTGGCGTTTCACTTGTGTCTGCTCCT...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
3UTR-3UTR GCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGATTCCAAATTCCTATaGCCCCGATCTGCAAGCCTC +
Preference number: 2 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYDSKFL*PRSASL
Trigger: GAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
3UTR-3UTR GCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGCTCCAGGATCTCCCTTaGTCAAAAGTGGCCTCAATC +
Preference number: 2 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKLQDLP*SKVASI
Trigger: GATTGAGGCCACTTTTGAGCAAGGGAGATCCTGGAG...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGGACTCACTAAGTTTCTaGGGGACTGTCATGCAGGGA +
Preference number: 2 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKDSLSF*GTVMQG
Trigger: TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTC...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR TCA 90 bp ACTGACCGTGCATCTACACTTGGGCCAGCACATTGCAGATGCTCAACAGCCACAATATTTGAGATGCTATaGAGGAGAAACCTCAACAAG +
Preference number: 2 (lower is better)
Translates to: TDRASTLGPAHCRCSTATIFEML*RRNLNK
Trigger: CTTGTTGAGGTTTCTCCTTCATAGCATCTCAAATAT...TGTGGCTGTTGAGCATCTGCAATGTGCTGGCCCAAGTGTAGATGCACGGTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR-3UTR TCA 90 bp AGAATTCGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGACAATAGCGCTCCCATaGTACCTCACTCTTGCTGAC +
Preference number: 2 (lower is better)
Translates to: RIRPNAKVLKICPTSQTRTIALP*YLTLAD
Trigger: GTCAGCAAGAGTGAGGTATCATGGGAGCGCTATTGT...CCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCGAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR-3UTR GCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATGCCAAACCCCAAGATTaGAGGGAAGCTTTCTGGATG +
Preference number: 2 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNAKPQD*REAFWM
Trigger: CATCCAGAAAGCTTCCCTGCAATCTTGGGGTTTGGC...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
3UTR-3UTR CCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGTCTAACACATCCCTTTaGCAGGCATATGTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKSNTSL*QAYVLG
Trigger: ACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGA...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR TCA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCCTGGAGAACAGAAAGTaGACATTCACCTCCTGCACT +
Preference number: 2 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCLENRK*TFTSCT
Trigger: AGTGCAGGAGGTGAATGTTCACTTTCTGTTCTCCAG...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
3UTR-3UTR TCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGGGAAATGTCGCTATTTaGCGCCAGAACCTGAATTTG +
Preference number: 2 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKGNVAI*RQNLNL
Trigger: CAAATTCAGGTTCTGGCGTCAAATAGCGACATTTCC...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR GCA 90 bp AGAATTCGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGATACAATGGGCTGCATaGAGAGGGGAGTTTGAGTTC +
Preference number: 2 (lower is better)
Translates to: RIRPNAKVLKICPTSQTRIQWAA*RGEFEF
Trigger: GAACTCAAACTCCCCTCTGCATGCAGCCCATTGTAT...CCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCGAATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR-3UTR CCA 90 bp ATTCATCCAGAACAATCAAGTGTGTGTACACAGAAATCTAGAAGGAAATCTACACGTCCCTGCAAACCCTaGATGCTCGCTGCTGTGACC +
Preference number: 2 (lower is better)
Translates to: IHPEQSSVCTQKSRRKSTRPCKP*MLAAVT
Trigger: GGTCACAGCAGCGAGCATCCAGGGTTTGCAGGGACG...TGTAGATTTCCTTCTAGATTTCTGTGTACACACACTTGATTGTTCTGGATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
3UTR-3UTR GCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACACGTAAAAAGCCATGCTaGAGAACTTTCTCCAATTAT +
Preference number: 2 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTRKKPC*RTFSNY
Trigger: ATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACG...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR CCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCGCTCTGGAGCACTCGTaGCGGAGTGTGTCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFALEHS*RSVSVC
Trigger: ACACACTGACACACTCCGCCACGAGTGCTCCAGAGC...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR CCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGGCTCTGGAGCACTCGTaGCGGAGTGTGTCAGTGTGT +
Preference number: 2 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWALEHS*RSVSVC
Trigger: ACACACTGACACACTCCGCCACGAGTGCTCCAGAGC...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR CCA 90 bp ATTCGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGGAAATTTACATACACAGCTaGATACAATGGGCTGCATGC +
Preference number: 2 (lower is better)
Translates to: IRPNAKVLKICPTSQTREIYIHS*IQWAAC
Trigger: GCATGCAGCCCATTGTATCCAGCTGTGTATGTAAAT...TTCCCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR-3UTR CCA 90 bp ATTCGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGGAAACAAGGCTACGCTGCTaGCTTTTGTTTGGAACAATA +
Preference number: 2 (lower is better)
Translates to: IRPNAKVLKICPTSQTRETRLRC*LLFGTI
Trigger: TATTGTTCCAAACAAAAGCCAGCAGCGTAGCCTTGT...TTCCCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR-3UTR TCA 90 bp ATTCGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGGAACTCGTTTGTGATATTTaGGATGCTATGAAGGAGAAA +
Preference number: 2 (lower is better)
Translates to: IRPNAKVLKICPTSQTRELVCDI*DAMKEK
Trigger: TTTCTCCTTCATAGCATCTCAAATATCACAAACGAG...TTCCCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR-3UTR TCA 90 bp AAGCCAAACCTCAGTCATAATGCAGATCCCTGTCTAACAGGTGATCATTGTTTTATGCAGAGGGGAGTTTaGGTTCCAAAGTATTTCTCT +
Preference number: 2 (lower is better)
Translates to: KPNLSHNADPCLTGDHCFMQRGV*VPKYFS
Trigger: AGAGAAATACTTTGGAACTCAAACTCCCCTCTGCAT...AAAACAATGATCACCTGTTAGACAGGGATCTGCATTATGACTGAGGTTTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR-3UTR GCA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCCGTAAAAAGCCATGCTaGAGAACTTTCTCCAATTAT +
Preference number: 2 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCRKKPC*RTFSNY
Trigger: ATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACG...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
3UTR-3UTR TCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCGATTCTAGCACCTACTaGGAAATCAAGGAAAAGAAA +
Preference number: 2 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFDSSTY*EIKEKK
Trigger: TTTCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATC...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR TCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGGATTCTAGCACCTACTaGGAAATCAAGGAAAAGAAA +
Preference number: 2 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWDSSTY*EIKEKK
Trigger: TTTCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATC...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR GCA 72 bp CACCCGCCCTCAGCCTGGGAGAAAGTGCGTTACGGCTaGAGCCTGGAAACGAGGGCAGGCTCTCTCCAGGAC +
Preference number: 3 (lower is better)
Translates to: HPPSAWEKVRYG*SLETRAGSLQD
Trigger: GTCCTGGAGAGAGCCTGCCCTCGTTTCCAGGCTGCAGCCGTAACGCACTTTCTCCCAGGCTGAGGGCGGGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 72 bp CCTCAGCCTGGGAGAAAGTGCGTTACGGCTGCAGCCTaGAAACGAGGGCAGGCTCTCTCCAGGACGGTTCCG +
Preference number: 3 (lower is better)
Translates to: PQPGRKCVTAAA*KRGQALSRTVP
Trigger: CGGAACCGTCCTGGAGAGAGCCTGCCCTCGTTTCCAGGCTGCAGCCGTAACGCACTTTCTCCCAGGCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 72 bp CAGAGGGCAGACACCCCAGAACACCCGCCCTCAGCCTaGGAGAAAGTGCGTTACGGCTGCAGCCTGGAAACG +
Preference number: 3 (lower is better)
Translates to: QRADTPEHPPSA*EKVRYGCSLET
Trigger: CGTTTCCAGGCTGCAGCCGTAACGCACTTTCTCCCAGGCTGAGGGCGGGTGTTCTGGGGTGTCTGCCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 72 bp GTGTCTGAGAGAAAAGGATCGGAAGAGGCCACGTCCTaGCAGGAAGCAGGGCCGACAGAGGGCAGACACCCC +
Preference number: 3 (lower is better)
Translates to: VSERKGSEEATS*QEAGPTEGRHP
Trigger: GGGGTGTCTGCCCTCTGTCGGCCCTGCTTCCTGCCAGGACGTGGCCTCTTCCGATCCTTTTCTCTCAGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 72 bp CAGCATCTCTTCCTGCTCCCTCTGCGGCCTGGGTCCTaGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCT +
Preference number: 3 (lower is better)
Translates to: QHLFLLPLRPGS*MDFVSADPVWS
Trigger: AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGGGAGCAGGAAGAGATGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 72 bp ATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTaGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGC +
Preference number: 3 (lower is better)
Translates to: IPMPPICKPRGL*STRGGVCQCVC
Trigger: GCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR CCA 72 bp ATCTCTTCCTGCTCCCTCTGCGGCCTGGGTCCTGGATaGACTTTGTGTCCGCCGACCCAGTGTGGTCTCTGT +
Preference number: 3 (lower is better)
Translates to: ISSCSLCGLGPG*TLCPPTQCGLC
Trigger: ACAGAGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGGGAGCAGGAAGAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR TCA 72 bp AACATCGTCCCTGCAAACCCTGGATGCTCGCTGCTGTaGCCAGGCCTCGGTCCAAGCCTCTGTCCATGTGGA +
Preference number: 3 (lower is better)
Translates to: NIVPANPGCSLL*PGLGPSLCPCG
Trigger: TCCACATGGACAGAGGCTTGGACCGAGGCCTGGTCACAGCAGCGAGCATCCAGGGTTTGCAGGGACGATGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR TCA 72 bp AATCCGAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTaGAGCTCAACCTCGAGGACACCGAACAAGATACGG +
Preference number: 3 (lower is better)
Translates to: NPSVHAASAAVE*SSTSRTPNKIR
Trigger: CCGTATCTTGTTCGGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTCGGATT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 72 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTaGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTG +
Preference number: 3 (lower is better)
Translates to: IPNSYAPDLQAS*ALEHSWRSVSV
Trigger: CACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR CCA 72 bp GGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTaGTCTCTGTCCTACAATTCTTGGGATGGGACCAGC +
Preference number: 3 (lower is better)
Translates to: GSWMDFVSADPV*SLSYNSWDGTS
Trigger: GCTGGTCCCATCCCAAGAATTGTAGGACAGAGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 72 bp AAACTATCAGCATCTCTTCCTGCTCCCTCTGCGGCCTaGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGT +
Preference number: 3 (lower is better)
Translates to: KLSASLPAPSAA*VLDGLCVRRPS
Trigger: ACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGGGAGCAGGAAGAGATGCTGATAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CAA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCAGGTTCATGTCAGCTTaGCCTCCCTGTGAACAAACT +
Preference number: 3 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTRFMSA*PPCEQT
Trigger: AGTTTGTTCACAGGGAGGCAAAGCTGACATGAACCT...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR GCA 72 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTaGAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGA +
Preference number: 3 (lower is better)
Translates to: IALGFQIPMPPI*KPRGLWSTRGG
Trigger: TCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR CCA 72 bp ACAGGCACTCTGGTCTCCCGCCTACCCCATGCAGGATaGCTATCCCCATGCAGAATGGCTGTGACTTTCAAG +
Preference number: 3 (lower is better)
Translates to: TGTLVSRLPHAG*LSPCRMAVTFK
Trigger: CTTGAAAGTCACAGCCATTCTGCATGGGGATAGCCATCCTGCATGGGGTAGGCGGGAGACCAGAGTGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR TCA 72 bp CACCTCCTGCACTCCCTGTGCAAAATGGAAGAGGTCTaGTGGAGCAGATGTCTGTGCTGCTGGCAGAGCACA +
Preference number: 3 (lower is better)
Translates to: HLLHSLCKMEEV*WSRCLCCWQST
Trigger: TGTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGCAGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR GCA 72 bp TTCTATTACAGGCACTCTGGTCTCCCGCCTACCCCATaGAGGATGGCTATCCCCATGCAGAATGGCTGTGAC +
Preference number: 3 (lower is better)
Translates to: FYYRHSGLPPTP*RMAIPMQNGCD
Trigger: GTCACAGCCATTCTGCATGGGGATAGCCATCCTGCATGGGGTAGGCGGGAGACCAGAGTGCCTGTAATAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR TCA 72 bp GCTGCTGGCAGAGCACAGGCTAGGAGCAGACACAAGTaGAACGCCAGGCAGAAAACAGAGTCTGTAACATCG +
Preference number: 3 (lower is better)
Translates to: AAGRAQARSRHK*NARQKTESVTS
Trigger: CGATGTTACAGACTCTGTTTTCTGCCTGGCGTTTCACTTGTGTCTGCTCCTAGCCTGTGCTCTGCCAGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR GCA 72 bp TCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTaGAATGTGGGGTCACCATGCAGACCTGCCCCTAGG +
Preference number: 3 (lower is better)
Translates to: SRMKSGTQMVYQ*NVGSPCRPAPR
Trigger: CCTAGGGGCAGGTCTGCATGGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 72 bp GCTGTGACCAGGCCTCGGTCCAAGCCTCTGTCCATGTaGAACGCCCCTTTGCTCCCTTTAATTAAAGGGATA +
Preference number: 3 (lower is better)
Translates to: AVTRPRSKPLSM*NAPLLPLIKGI
Trigger: TATCCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCGAGGCCTGGTCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR CCA 72 bp GGGTGGGACTCCAGTTCCCACTTCCAGGATGAAGAGTaGGACTCAAATGGTTTACCAGTGCAATGTGGGGTC +
Preference number: 3 (lower is better)
Translates to: GWDSSSHFQDEE*DSNGLPVQCGV
Trigger: GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTGGGAACTGGAGTCCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 72 bp CGACCCAGTGTGGTCTCTGTCCTACAATTCTTGGGATaGGACCAGCACAATGGCAGAAGAGACCTCCAGTGT +
Preference number: 3 (lower is better)
Translates to: RPSVVSVLQFLG*DQHNGRRDLQC
Trigger: ACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGAGACCACACTGGGTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CCA 72 bp CCCGAACAAAGGGAGGAAAATCCGAAGGAAACCGAGTaGTTGGGCTTCAAAGACACCATGAAGGTCAGGGCC +
Preference number: 3 (lower is better)
Translates to: PEQREENPKETE*LGFKDTMKVRA
Trigger: GGCCCTGACCTTCATGGTGTCTTTGAAGCCCAACCACTCGGTTTCCTTCGGATTTTCCTCCCTTTGTTCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR GCA 72 bp TGCTGGTTTCTAGATCAAACTATCAGCATCTCTTCCTaGTCCCTCTGCGGCCTGGGTCCTGGATGGACTTTG +
Preference number: 3 (lower is better)
Translates to: CWFLDQTISISS*SLCGLGPGWTL
Trigger: CAAAGTCCATCCAGGACCCAGGCCGCAGAGGGAGCAGGAAGAGATGCTGATAGTTTGATCTAGAAACCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR GCA 72 bp GACCGTGCATCTACACTTGGGCCAGCACATTGCAGATaGTCAACAGCCACAAGAGACCAGTGGTTACCACAT +
Preference number: 3 (lower is better)
Translates to: DRASTLGPAHCR*STATRDQWLPH
Trigger: ATGTGGTAACCACTGGTCTCTTGTGGCTGTTGAGCATCTGCAATGTGCTGGCCCAAGTGTAGATGCACGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR CCA 72 bp CCACCCCAGAAGGAAACGAATGCCTTCAAGCCAATGTaGCCTGAAGTCCCACGACAAAAGGTTCATGTCAGC +
Preference number: 3 (lower is better)
Translates to: PPQKETNAFKPM*PEVPRQKVHVS
Trigger: GCTGACATGAACCTTTTGTCGTGGGACTTCAGGCCACATTGGCTTGAAGGCATTCGTTTCCTTCTGGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CAA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGGGTCCTGGATGGACTTaGTGTCCGCCGACCCAGTGT +
Preference number: 3 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKGPGWT*CPPTQC
Trigger: ACACTGGGTCGGCGGACACAAAGTCCATCCAGGACC...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CAA 90 bp ACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCATGCAGACCTGCCCCTAGGATGTGGAACGCCCCTTaGCTCCCTTTAATTAAAGGG +
Preference number: 3 (lower is better)
Translates to: TQMVYQCNVGSPCRPAPRMWNAP*LPLIKG
Trigger: CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACAT...CCTAGGGGCAGGTCTGCATGGTGACCCCACATTGCACTGGTAAACCATTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR-3UTR CAA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGATGTGGAACGCCCCTTaGCTCCCTTTAATTAAAGGG +
Preference number: 3 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLMWNAP*LPLIKG
Trigger: CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACAT...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR CAA 90 bp CCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGAACAAGATACGGATGGAAATGTCGCTATTaGACGCCAGAACCTGAATTT +
Preference number: 3 (lower is better)
Translates to: PLPQWSEAQPRGHRTRYGWKCRY*TPEPEF
Trigger: AAATTCAGGTTCTGGCGTCAAATAGCGACATTTCCA...TCCGTATCTTGTTCGGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR TCA 72 bp GGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTaGCACTGGAGAACAGAAAGTGAACATTCACCTCCT +
Preference number: 3 (lower is better)
Translates to: GPCAFHPVETEQ*HWRTESEHSPP
Trigger: AGGAGGTGAATGTTCACTTTCTGTTCTCCAGTGTCACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR CCA 72 bp TGGATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTaGGGGACTGTCATGCAGGGAGATCCAAACCAGTCT +
Preference number: 3 (lower is better)
Translates to: WMFSPVQDSLSF*GTVMQGDPNQS
Trigger: AGACTGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR CAA 90 bp AGTGGTATGATCACAGTTCACTGTAACGTGGAGCTTCCGGGCTCAAATGATCCTCAGCCTCCCAAAGAGTaGGGATTATGGCATGAGCCA +
Preference number: 3 (lower is better)
Translates to: SGMITVHCNVELPGSNDPQPPKE*GLWHEP
Trigger: TGGCTCATGCCATAATCCCAACTCTTTGGGAGGCTG...AGGATCATTTGAGCCCGGAAGCTCCACGTTACAGTGAACTGTGATCATACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR-3UTR CAA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAATGTGGAACGCCCCTTaGCTCCCTTTAATTAAAGGG +
Preference number: 3 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTMWNAP*LPLIKG
Trigger: CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACAT...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR-3UTR CAA 90 bp CGTGCATCTACACTTGGGCCAGCACATTGCAGATGCTCAACAGCCACAAGAGACCTCTTGCTGACAATATaGGTAATACGGGAGCATGAA +
Preference number: 3 (lower is better)
Translates to: RASTLGPAHCRCSTATRDLLLTI*VIREHE
Trigger: TTCATGCTCCCGTATTACCAATATTGTCAGCAAGAG...GTCTCTTGTGGCTGTTGAGCATCTGCAATGTGCTGGCCCAAGTGTAGATGCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR CCA 72 bp ACTAAAGCCAAACCCCAAGATTGCAGGGAAGCTTTCTaGATGTTCAGTCCAGTCCAGGACTCACTAAGTTTC +
Preference number: 3 (lower is better)
Translates to: TKAKPQDCREAF*MFSPVQDSLSF
Trigger: GAAACTTAGTGAGTCCTGGACTGGACTGAACATCCAGAAAGCTTCCCTGCAATCTTGGGGTTTGGCTTTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR CCA 72 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTaGATTCTAGCACCTACTGAGAAATCAAGGAAAAGA +
Preference number: 3 (lower is better)
Translates to: VSVSARTVKGVN*ILAPTEKSRKR
Trigger: TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR CCA 72 bp AGCCTTCTAACACATCCCTTTGGCAGGCATATGTCCTaGGTCACTTGTGTGCTGAGTTATTTGTATGGAATC +
Preference number: 3 (lower is better)
Translates to: SLLTHPFGRHMS*VTCVLSYLYGI
Trigger: GATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp GGCAGGAAGCAGGGCCGACAGAGGGCAGACACCCCAGAACACCCGCCCTCAGCCGGCGGCCGCTGGGGGTaGAAGGCCGGTGCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: GRKQGRQRADTPEHPPSAGGRWG*KAGACW
Trigger: CCAACAGGCACCGGCCTTGCACCCCCAGCGGCCGCC...GGCTGAGGGCGGGTGTTCTGGGGTGTCTGCCCTCTGTCGGCCCTGCTTCCTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GGCAGGAAGCAGGGCCGACAGAGGGCAGACACCCCAGAACACCCGCCCTCAGCCTGGGGAGGGTGCTTGTaGGCCTGTGGCGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: GRKQGRQRADTPEHPPSAWGGCL*ACGAGS
Trigger: GCTGCCGGCGCCACAGGCCCACAAGCACCCTCCCCA...GGCTGAGGGCGGGTGTTCTGGGGTGTCTGCCCTCTGTCGGCCCTGCTTCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp GGCAGGAAGCAGGGCCGACAGAGGGCAGACACCCCAGAACACCCGCCCTCAGCCGACTGCAGCGCTGACTaGGAGGCTGGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GRKQGRQRADTPEHPPSADCSAD*EAGSCR
Trigger: CCTGCAGCTGCCAGCCTCTCAGTCAGCGCTGCAGTC...GGCTGAGGGCGGGTGTTCTGGGGTGTCTGCCCTCTGTCGGCCCTGCTTCCTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGGGGTGTGCGGGAGGCTaGGGAGGCTCCGGAGCGCGG +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQGCAGG*GGSGAR
Trigger: CCGCGCTCCGGAGCCTCCTCAGCCTCCCGCACACCC...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400908.7
CDS-3UTR CCA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTATCTCGGGCCGCAGCTaGGGGCCCGCCAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSISGRS*GPARAS
Trigger: ACTGGCCCTGGCGGGCCCCCAGCTGCGGCCCGAGAT...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGCTTAGCCGCCCGCTCTaGCTCGCGCTCCCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVLSRPL*LALPLS
Trigger: CGAGAGCGGGAGCGCGAGGCAGAGCGGGCGGCTAAG...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GGCAGGAAGCAGGGCCGACAGAGGGCAGACACCCCAGAACACCCGCCCTCAGCCTCCGAGTGTGCACGCTaGCTCTGCCGCAGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: GRKQGRQRADTPEHPPSASECAR*LCRSGV
Trigger: CACTCCACTGCGGCAGAGGCAGCGTGCACACTCGGA...GGCTGAGGGCGGGTGTTCTGGGGTGTCTGCCCTCTGTCGGCCCTGCTTCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGGAGGGCCCCGAGAGGTaGGGAGGGTGCTTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVEGPER*GGCLWA
Trigger: GGCCCACAAGCACCCTCCCCACCTCTCGGGGCCCTC...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GGCAGGAAGCAGGGCCGACAGAGGGCAGACACCCCAGAACACCCGCCCTCAGCCGGGCGAGGAGGGCAATaGCTGGCTCTGAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: GRKQGRQRADTPEHPPSAGRGGQ*LALRHE
Trigger: CTCATGCCTCAGAGCCAGCCATTGCCCTCCTCGCCC...GGCTGAGGGCGGGTGTTCTGGGGTGTCTGCCCTCTGTCGGCCCTGCTTCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGGAGAGGTGGGGAGGGTaGTTGTGGGCCTGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVERWGG*LWACGA
Trigger: GGCGCCACAGGCCCACAAGCACCCTCCCCACCTCTC...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGCTTAGCCGCCCGCTCTaGCTCGCGCTCCCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVLSRPL*LALPLS
Trigger: CGAGAGCGGGAGCGCGAGGCAGAGCGGGCGGCTAAG...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GGCAGGAAGCAGGGCCGACAGAGGGCAGACACCCCAGAACACCCGCCCTCAGCCATGGTGAGGGCGCTGTaGCGGGCAAAGTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: GRKQGRQRADTPEHPPSAMVRAL*RAKCSM
Trigger: CATGGAGCACTTTGCCCGGCACAGCGCCCTCACCAT...GGCTGAGGGCGGGTGTTCTGGGGTGTCTGCCCTCTGTCGGCCCTGCTTCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GGCAGGAAGCAGGGCCGACAGAGGGCAGACACCCCAGAACACCCGCCCTCAGCCCCATGCAGCCACTGCTaGTCCATGGCCAGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GRKQGRQRADTPEHPPSAPCSHC*SMASLC
Trigger: GCAGAGACTGGCCATGGAGCAGCAGTGGCTGCATGG...GGCTGAGGGCGGGTGTTCTGGGGTGTCTGCCCTCTGTCGGCCCTGCTTCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGAGGGTACGCTGCTGCTaGGGAGGTCCCCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVRVRCC*GGPQRG
Trigger: GCCCCTCTGGGGACCTCCCCAGCAGCAGCGTACCCT...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGTGGGGAGGGTGCTTGTaGGCCTGTGGCGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: NSYAPDLQASWALEHSWRWGGCL*ACGAGS
Trigger: GCTGCCGGCGCCACAGGCCCACAAGCACCCTCCCCA...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGGCCAGGTCCCGCCGGTaGGGTAGAGGTGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVARSRR*GRGGGA
Trigger: TGCCCCTCCACCTCTACCCCACCGGCGGGACCTGGC...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGCGCACCAGAGCAGGGTaGCTGGGCCGAGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQRTRAG*LGRGAR
Trigger: CCTGGCACCTCGGCCCAGCCACCCTGCTCTGGTGCG...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp GGCAGGAAGCAGGGCCGACAGAGGGCAGACACCCCAGAACACCCGCCCTCAGCCGACGCTGCGACTGTCTaGACTCTCTCCCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: GRKQGRQRADTPEHPPSADAATV*TLSLTF
Trigger: GAAGGTGAGGGAGAGAGTTCAGACAGTCGCAGCGTC...GGCTGAGGGCGGGTGTTCTGGGGTGTCTGCCCTCTGTCGGCCCTGCTTCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCAGGAGGGAGCTGGGGTaGCCCCAGTGGGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTRRELG*PQWEPA
Trigger: TGCAGGCTCCCACTGGGGTCACCCCAGCTCCCTCCT...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGGGTTGGTGGGCGACATaGCGTGGGGCCGGGCGTACT +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQGWWAT*RGAGRT
Trigger: AGTACGCCCGGCCCCACGTCATGTCGCCCACCAACC...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGGGATGCTCGCTGCTGTaGCCAGGCCTCGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVGCSLL*PGLGPS
Trigger: GCTTGGACCGAGGCCTGGTCACAGCAGCGAGCATCC...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGGTGAGGGTACGCTGCTaGTGGGGAGGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVVRVRC*WGGPQR
Trigger: CCTCTGGGGACCTCCCCAGCAGCAGCGTACCCTCAC...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAGGTACTGGCAGCGCTaGGGGAGTTCCGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVRYWQR*GSSGRW
Trigger: CCAGCGGCCGGAACTCCCCCAGCGCTGCCAGTACCT...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTTGCAAGGCTGGGGGCTaGGCCTGCAGCATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSCKAGG*ACSICC
Trigger: GCAGCAGATGCTGCAGGCCCAGCCCCCAGCCTTGCA...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGCGTGGGGGAGCCCTGTaGGGGAACTGCAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVRGGAL*GNCSGR
Trigger: TCTGCCACTGCAGTTCCCCCACAGGGCTCCCCCACG...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGGAGGCCAAAGGGCTGTaGGGGGCCTGGGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVEAKGL*GAWVLQ
Trigger: CTGCAGCACCCAGGCCCCCCACAGCCCTTTGGCCTC...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGCAGGGGCTGCTCCCGTaGAGGCTGTTGGGACTGCAG +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVQGLLP*RLLGLQ
Trigger: CTGCAGTCCCAACAGCCTCCACGGGAGCAGCCCCTG...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGTGGGCGACATGACGTaGGGCCGGGCGTACTCGCTC +
Preference number: 4 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTVGDMT*GRAYSL
Trigger: GAGCGAGTACGCCCGGCCCCACGTCATGTCGCCCAC...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGCATGGGGTTGGCGGCTaGGTGCAGGGGGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: NSYAPDLQASWALEHSWRHGVGG*VQGVQL
Trigger: GAGCTGGACCCCCTGCACCCAGCCGCCAACCCCATG...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGATCCCACGGTGGTTGTaGCCCGGTGCTGAGCGCACA +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVIPRWL*PGAERT
Trigger: TGTGCGCTCAGCACCGGGTCACAACCACCGTGGGAT...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337907.7
CDS-3UTR TCA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGGACTGCAGCGCTGACTaGGAGGCTGGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NSYAPDLQASWALEHSWRDCSAD*EAGSCR
Trigger: CCTGCAGCTGCCAGCCTCTCAGTCAGCGCTGCAGTC...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGCGCTATGCTGCCTCCTaGAGCCGCCGCACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQRYAAS*SRRTRA
Trigger: TGCTCTGGTGCGGCGGCTTCAGGAGGCAGCATAGCG...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGACCCGGCCAGAGGCATaGAGTACAGGTCTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVTRPEA*STGLSG
Trigger: CCCGGACAGACCTGTACTTCATGCCTCTGGCCGGGT...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTGGCTCGGGAGCTGGCTaGTTCGGGGGTCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSGSGAG*FGGLLP
Trigger: TGGAAGAAGACCCCCGAAGCAGCCAGCTCCCGAGCC...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGCGATGCCATGCGCTCTaGGTGGATACGCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVRCHAL*VDTLGC
Trigger: GCAGCCGAGCGTATCCACGCAGAGCGCATGGCATCG...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTGGGCATGCATGGCCTaGAGCTGGTGGGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVWACMA*SWWAAD
Trigger: GTCAGCAGCCCACCAGCTGCAGGCCATGCATGCCCA...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGACCCTGGATGCTCGCTaGTGTGACCAGGCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVTLDAR*CDQASV
Trigger: GACCGAGGCCTGGTCACAGCAGCGAGCATCCAGGGT...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GGCAGGAAGCAGGGCCGACAGAGGGCAGACACCCCAGAACACCCGCCCTCAGCCAAAGTGCGTTACGGCTaGAGCCTGGAAACGAGGGCA +
Preference number: 4 (lower is better)
Translates to: GRKQGRQRADTPEHPPSAKVRYG*SLETRA
Trigger: TGCCCTCGTTTCCAGGCTGCAGCCGTAACGCACTTT...GGCTGAGGGCGGGTGTTCTGGGGTGTCTGCCCTCTGTCGGCCCTGCTTCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCCATTGTCCTGGGGGCTaGGGATGCTCGGGGACGTGC +
Preference number: 4 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTHCPGG*GCSGTC
Trigger: GCACGTCCCCGAGCATCCCCAGCCCCCAGGACAATG...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGGCGTGGGCCCTGGCGTaGGCAGCTGAGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSAWALA*AAEGSL
Trigger: CAGGGACCCCTCAGCTGCCCACGCCAGGGCCCACGC...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCTGCCATGAGGGCCTGTCCCCACCCCAGAAGGAAACGAATGCCTTCAAGCCAATGGGGAGGGTGCTTGTaGGCCTGTGGCGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: PAMRACPHPRRKRMPSSQWGGCL*ACGAGS
Trigger: GCTGCCGGCGCCACAGGCCCACAAGCACCCTCCCCA...TTGGCTTGAAGGCATTCGTTTCCTTCTGGGGTGGGGACAGGCCCTCATGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGACTGGCTGGCGTGACTaGGGGTGTCCACCACAGTGG +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVTGWRD*GCPPQW
Trigger: CCACTGTGGTGGACACCCCCAGTCACGCCAGCCAGT...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGCCTCCTCCCTCTTCTTaGCCAGCTTGGACCCGGCCA +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVPPPSS*PAWTRP
Trigger: TGGCCGGGTCCAAGCTGGCCAAGAAGAGGGAGGAGG...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GGCAGGAAGCAGGGCCGACAGAGGGCAGACACCCCAGAACACCCGCCCTCAGCCAGCAGCAATGGTGGTTaGTGGTGGCTCGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: GRKQGRQRADTPEHPPSASSNGG*WWLEGW
Trigger: CCATCCTTCGAGCCACCACCAACCACCATTGCTGCT...GGCTGAGGGCGGGTGTTCTGGGGTGTCTGCCCTCTGTCGGCCCTGCTTCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGCCCGCTCGCGGATGGTaGGGTCGACGTTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVPARGW*GRRCRG
Trigger: GCCTCTACAACGTCGACCCCACCATCCGCGAGCGGG...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGGGGCCAGGGGATCGCTaGTCAGCGATGCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVGPGDR*SAMPCA
Trigger: AGCGCATGGCATCGCTGACCAGCGATCCCCTGGCCC...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCTGCCATGAGGGCCTGTCCCCACCCCAGAAGGAAACGAATGCCTTCAAGCCAAGGGAAGCGAGCCAGGTaGGGACCGGCAGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PAMRACPHPRRKRMPSSQGKRAR*GPAVRG
Trigger: CCCCCTGACTGCCGGTCCCCACCTGGCTCGCTTCCC...TTGGCTTGAAGGCATTCGTTTCCTTCTGGGGTGGGGACAGGCCCTCATGGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGGGCAATGGCTGGCTCTaGGGCATGAGTTGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVGNGWL*GMSCRG
Trigger: ACCCCTGCAACTCATGCCTCAGAGCCAGCCATTGCC...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGCCAGAGCCTCCTCCTTaGTCTGGACGGTGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVPEPPP*SGRWGV
Trigger: CACTCCCCACCGTCCAGATCAAGGAGGAGGCTCTGG...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GGCAGGAAGCAGGGCCGACAGAGGGCAGACACCCCAGAACACCCGCCCTCAGCCCGCCATGCTCCTTGCTaGCCTCAAGTACATAAGGAG +
Preference number: 4 (lower is better)
Translates to: GRKQGRQRADTPEHPPSARHAPC*PQVHKE
Trigger: CTCCTTATGTACTTGAGGGCAGCAAGGAGCATGGCG...GGCTGAGGGCGGGTGTTCTGGGGTGTCTGCCCTCTGTCGGCCCTGCTTCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGCTCCTGAACACGGCCTaGCTGCGGTGCCTACGATGG +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVLLNTA*LRCLRW
Trigger: CCATCGTAGGCACCGCAGGCAGGCCGTGTTCAGGAG...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGGCCTGCAGCATCTGCTaGTGGGCTGACGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVACSIC*WADESE
Trigger: CTCGGACTCGTCAGCCCAGCAGCAGATGCTGCAGGC...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGGCGGCCGCTGGGGGTaGAAGGCCGGTGCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGGGRWG*KAGACW
Trigger: CCAACAGGCACCGGCCTTGCACCCCCAGCGGCCGCC...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGCTTAGCCGCCCGCTCTaGCTCGCGCTCCCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSLSRPL*LALPLS
Trigger: CGAGAGCGGGAGCGCGAGGCAGAGCGGGCGGCTAAG...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGTGGGCATGCATGGCCTaGAGCTGGTGGGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVWACMA*SWWAAD
Trigger: GTCAGCAGCCCACCAGCTGCAGGCCATGCATGCCCA...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCACCCTGGATGCTCGCTaGTGTGACCAGGCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTTLDAR*CDQASV
Trigger: GACCGAGGCCTGGTCACAGCAGCGAGCATCCAGGGT...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTCAGCCTGGGAGAAAGTaGGTTACGGCTGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSQPGRK*VTAAAW
Trigger: CCAGGCTGCAGCCGTAACGCACTTTCTCCCAGGCTG...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGGTGGTGGTGAAGCAGTaGCGGCAGGCGTACCCCTTC +
Preference number: 4 (lower is better)
Translates to: NSYAPDLQASWALEHSWRVVVKQ*RQAYPF
Trigger: GAAGGGGTACGCCTGCCGCCACTGCTTCACCACCAC...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGAACAAGATACGGACATGGCCAAGGGCGCTaGTGGCAGGGGCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PLPQWSEAQPRGHRTRYGHGQGR*WQGLLP
Trigger: CGGGAGCAGCCCCTGCCACCAGCGCCCTTGGCCATG...TCCGTATCTTGTTCGGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCCGCACCAGAGCAGGGTaGCTGGGCCGAGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALRTRAG*LGRGAR
Trigger: CCTGGCACCTCGGCCCAGCCACCCTGCTCTGGTGCG...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGCCTCCTCCTTGATCTaGACGGTGGGGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTASSLI*TVGSGQ
Trigger: CTGCCCACTCCCCACCGTCCAGATCAAGGAGGAGGC...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGGCCTCCTCCTTGATCTaGACGGTGGGGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQASSLI*TVGSGQ
Trigger: CTGCCCACTCCCCACCGTCCAGATCAAGGAGGAGGC...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGGGGTGTCCACCACAGTaGGCTCCGGGGACGGGCTCC +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSGCPPQ*APGTGS
Trigger: GGAGCCCGTCCCCGGAGCCCACTGTGGTGGACACCC...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGACTGGCTGGCGTGACTaGGGGTGTCCACCACAGTGG +
Preference number: 4 (lower is better)
Translates to: NSYAPDLQASWALEHSWRTGWRD*GCPPQW
Trigger: CCACTGTGGTGGACACCCCCAGTCACGCCAGCCAGT...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGTGGTGGCTCGAAGGATaGCCGCATGTGGCCAGGACC +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVWWLEG*PHVART
Trigger: GGTCCTGGCCACATGCGGCCATCCTTCGAGCCACCA...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGGGGCAAAGTGCTCCATaGGGTTGGCGGCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVGQSAP*GWRLGA
Trigger: TGCACCCAGCCGCCAACCCCATGGAGCACTTTGCCC...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGCCTGCTGAACCTTGGTaGAGGGGGTCCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQPAEPW*RGSCWW
Trigger: CCACCAGCAGGACCCCCTCCACCAAGGTTCAGCAGG...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGCCTGCTGAACCTTGGTaGAGGGGGTCCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVPAEPW*RGSCWW
Trigger: CCACCAGCAGGACCCCCTCCACCAAGGTTCAGCAGG...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGAAGCCTCGTGGGCTCTaGAGCACTCGTGGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQKPRGL*STRGGV
Trigger: CACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTT...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGCACCCGCCCTCAGCCTaGGAGAAAGTGCGTTACGGC +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVHPPSA*EKVRYG
Trigger: GCCGTAACGCACTTTCTCCCAGGCTGAGGGCGGGTG...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGAAGAGGCCACGTCCTaGCAGGAAGCAGGGCCGACA +
Preference number: 4 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTEEATS*QEAGPT
Trigger: TGTCGGCCCTGCTTCCTGCCAGGACGTGGCCTCTTC...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGGCTCCCTCTGCGGCCTaGGTCCTGGATGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVAPSAA*VLDGLC
Trigger: ACAAAGTCCATCCAGGACCCAGGCCGCAGAGGGAGC...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGGAGAAGGTGGGGGCCTaGATGCAGGAGTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQEKVGA*MQESGS
Trigger: GCTCCCAGACTCCTGCATCCAGGCCCCCACCTTCTC...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGAGGAGGGAGCTGGGGTaGCCCCAGTGGGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSRRELG*PQWEPA
Trigger: TGCAGGCTCCCACTGGGGTCACCCCAGCTCCCTCCT...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CCTGGCCTCCTGAGAAGCAGCCCCCACACAGCATGCTTTCTGAATGCACTGTGGAGCTGCAGGGAGGTGTaGGGGTACGCTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PGLLRSSPHTACFLNALWSCREV*GYAAAG
Trigger: CCCAGCAGCAGCGTACCCTCACACCTCCCTGCAGCT...CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCTGCTTCTCAGGAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp CCTGGCCTCCTGAGAAGCAGCCCCCACACAGCATGCTTTCTGAATGCACTGTGGGACTGCAGCGCTGACTaGGAGGCTGGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PGLLRSSPHTACFLNALWDCSAD*EAGSCR
Trigger: CCTGCAGCTGCCAGCCTCTCAGTCAGCGCTGCAGTC...CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCTGCTTCTCAGGAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp CCTGGCCTCCTGAGAAGCAGCCCCCACACAGCATGCTTTCTGAATGCACTGTGGGCGACCTTCATGCGCTaGGCTGGACGCCTTAGCCGC +
Preference number: 4 (lower is better)
Translates to: PGLLRSSPHTACFLNALWATFMR*AGRLSR
Trigger: GCGGCTAAGGCGTCCAGCTCAGCGCATGAAGGTCGC...CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCTGCTTCTCAGGAGGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGGGTGCGGAGTCACGTTaGACATCTGCAGTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQGAESR*TSAVGP
Trigger: TGGCCCGACTGCAGATGTTCAACGTGACTCCGCACC...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGACGGCCTGCCTGCGGTaGCTACGATGGGCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSTACLR*LRWARE
Trigger: CTCCCGAGCCCATCGTAGGCACCGCAGGCAGGCCGT...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTCTGAGGCGACCTTCATaGGCTGAGCTGGACGCCTTA +
Preference number: 4 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSLRRPS*AELDAL
Trigger: TAAGGCGTCCAGCTCAGCGCATGAAGGTCGCCTCAG...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGATCGCTGGTCAGCGATaGCATGCGCTCTGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVIAGQR*HALCVD
Trigger: ATCCACGCAGAGCGCATGGCATCGCTGACCAGCGAT...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGCCATGCAGCCACTGCTaGTCCATGGCCAGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: NSYAPDLQASWALEHSWRPCSHC*SMASLC
Trigger: GCAGAGACTGGCCATGGAGCAGCAGTGGCTGCATGG...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGCAGCCTGGGAGAAAGTaGGTTACGGCTGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: NSYAPDLQASWALEHSWRQPGRK*VTAAAW
Trigger: CCAGGCTGCAGCCGTAACGCACTTTCTCCCAGGCTG...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCTGTGCACGCTGCCTCTaGCGCAGTGGAGTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTCARCL*RSGVKL
Trigger: GAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACA...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCTGCCATGAGGGCCTGTCCCCACCCCAGAAGGAAACGAATGCCTTCAAGCCAACTGCGGTGCCTACGATaGGCTCGGGAGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PAMRACPHPRRKRMPSSQLRCLR*ARELAA
Trigger: AGCAGCCAGCTCCCGAGCCCATCGTAGGCACCGCAG...TTGGCTTGAAGGCATTCGTTTCCTTCTGGGGTGGGGACAGGCCCTCATGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCTGCGACCATCAGGGCTaGCTGGCTGCTTCTTCCGAC +
Preference number: 4 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTCDHQG*LAASSD
Trigger: GTCGGAAGAAGCAGCCAGCCAGCCCTGATGGTCGCA...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCTCACTCTCATTGTCCTaGGGGCTGGGGATGCTCGGG +
Preference number: 4 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTSLSLS*GLGMLG
Trigger: CCCGAGCATCCCCAGCCCCCAGGACAATGAGAGTGA...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTCACTCTCATTGTCCTaGGGGCTGGGGATGCTCGGG +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQSLSLS*GLGMLG
Trigger: CCCGAGCATCCCCAGCCCCCAGGACAATGAGAGTGA...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTTGCAAGGCTGGGGGCTaGGCCTGCAGCATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SGALVAECVSVSARTVKGCKAGG*ACSICC
Trigger: GCAGCAGATGCTGCAGGCCCAGCCCCCAGCCTTGCA...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCGTGGGCCCTGGCGTaGGCAGCTGAGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLAWALA*AAEGSL
Trigger: CAGGGACCCCTCAGCTGCCCACGCCAGGGCCCACGC...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACGCGTGGGCCCTGGCGTaGGCAGCTGAGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHAWALA*AAEGSL
Trigger: CAGGGACCCCTCAGCTGCCCACGCCAGGGCCCACGC...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGACAGTGGCAGAGGGCGTaGGCCCTGGCGTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGQWQRA*ALAWAA
Trigger: AGCTGCCCACGCCAGGGCCCACGCCCTCTGCCACTG...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGGGTGCCTGTTGGATGTaGGTGTGGGGAACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQGACWM*VWGTGA
Trigger: AGCGCCTGTTCCCCACACCCACATCCAACAGGCACC...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTGAGGGTGCAGAAGGCTaGCCCGCCGACCCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SGALVAECVSVSARTVKGEGAEG*PADPVR
Trigger: TCTGACTGGGTCGGCGGGCCAGCCTTCTGCACCCTC...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGCTGTGAGGGCCGGGTaGGCCCTGACCGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALAVRAG*ALTVQW
Trigger: CCACTGCACGGTCAGGGCCCACCCGGCCCTCACAGC...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGTGGCGCCGGCAGCTaGGGGATGGGAGTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSCGAGS*GMGVVG
Trigger: GCCTACCACTCCCATCCCCCAGCTGCCGGCGCCACA...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGGCGGGGGCAGGTTCTaGCTCTGGGTCAGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: WPQSVARKMGPSSPQDPSGGGRF*LWVSPG
Trigger: CCCCGGGCTGACCCAGAGCCAGAACCTGCCCCCGCC...ACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CAGGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGGCGGGGGCAGGTTCTaGCTCTGGGTCAGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: QDLPCSKVASICGKKDGAGGGRF*LWVSPG
Trigger: CCCCGGGCTGACCCAGAGCCAGAACCTGCCCCCGCC...GGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGCCAGAGCAGGGTGGCTaGGCCGAGGTGCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALPEQGG*AEVPGP
Trigger: GGGACCTGGCACCTCGGCCCAGCCACCCTGCTCTGG...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGGCTCAGCCTCGCGCTTaGCCTTCTCAATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVAQPRA*PSQWPP
Trigger: AGGAGGCCATTGAGAAGGCCAAGCGCGAGGCTGAGC...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTAGGACCACTGAGCTGTaGGTCACTGAGGCGACCTTC +
Preference number: 4 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSRTTEL*VTEATF
Trigger: GAAGGTCGCCTCAGTGACCCACAGCTCAGTGGTCCT...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGGGGGCACAGCAGCAATaGTGGTTGGTGGTGGCTCGA +
Preference number: 4 (lower is better)
Translates to: NSYAPDLQASWALEHSWRGAQQQ*WLVVAR
Trigger: TCGAGCCACCACCAACCACCATTGCTGCTGTGCCCC...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGGCGACATGACGTaGGGCCGGGCGTACTCGCTC +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALVGDMT*GRAYSL
Trigger: GAGCGAGTACGCCCGGCCCCACGTCATGTCGCCCAC...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGGGGTTCAGGCCCGGGTaGAAAGAAGCAAAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVGFRPG*KEAKGW
Trigger: CCACCCTTTTGCTTCTTTCCACCCGGGCCTGAACCC...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACATCTCGGGCCGCAGCTaGGGGCCCGCCAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHISGRS*GPARAS
Trigger: ACTGGCCCTGGCGGGCCCCCAGCTGCGGCCCGAGAT...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGACAATGCGCGGGAAGCGAGCCAGGTaGGGACCGGCAGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LWQERWGRPHHKIQVTMRGKRAR*GPAVRG
Trigger: CCCCCTGACTGCCGGTCCCCACCTGGCTCGCTTCCC...GCGCATTGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGGGTGGGCTGCTGACATaGGGGGTGGGATGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSGGLLT*GVGWPQ
Trigger: CTGGGGCCATCCCACCCCCCATGTCAGCAGCCCACC...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGTGGCCACCATGCATGTaGGGGTGTCCATGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVWPPCM*GCPCSH
Trigger: GTGGCTGCATGGACACCCCCACATGCATGGTGGCCA...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGGATCTGCAAGCCTCGTaGGCTCTGGAGCACTCGTGG +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQDLQAS*ALEHSW
Trigger: CCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATC...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
3UTR CAA 72 bp TCCTGCTCCCTCTGCGGCCTGGGTCCTGGATGGACTTaGTGTCCGCCGACCCAGTGTGGTCTCTGTCCTACA +
Preference number: 4 (lower is better)
Translates to: SCSLCGLGPGWT*CPPTQCGLCPT
Trigger: TGTAGGACAGAGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGGGAGCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTTCCAGCACTTCTCGATaGGCTTGGGCACAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSSSTSR*AWAQAS
Trigger: AGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGA...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGAGCTGCAGGGAGGTGTaGGGGTACGCTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSSCREV*GYAAAG
Trigger: CCCAGCAGCAGCGTACCCTCACACCTCCCTGCAGCT...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGCGACCTTCATGCGCTaGGCTGGACGCCTTAGCCGC +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALATFMR*AGRLSR
Trigger: GCGGCTAAGGCGTCCAGCTCAGCGCATGAAGGTCGC...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGGGTCGACCAGCGGGTaGACGGGGCCTGCTGAACCT +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALGSTSG*TGPAEP
Trigger: AGGTTCAGCAGGCCCCGTTCACCCGCTGGTCGACCC...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CCTGGCCTCCTGAGAAGCAGCCCCCACACAGCATGCTTTCTGAATGCACTGTGGGGCTCGGGAGCTGGCTaGTTCGGGGGTCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: PGLLRSSPHTACFLNALWGSGAG*FGGLLP
Trigger: TGGAAGAAGACCCCCGAAGCAGCCAGCTCCCGAGCC...CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCTGCTTCTCAGGAGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAACGGCCTGCCTGCGGTaGCTACGATGGGCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGTACLR*LRWARE
Trigger: CTCCCGAGCCCATCGTAGGCACCGCAGGCAGGCCGT...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGGGATGCGACAGTCGGTaGAAAGCAGGATGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVGCDSR*KAGCSP
Trigger: GGGAGAACATCCTGCTTTGCACCGACTGTCGCATCC...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTGCTTCTTCCGACCACTaGGTAGTGTCGACATCGAGC +
Preference number: 4 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSASSDH*VVSTSS
Trigger: GCTCGATGTCGACACTACGCAGTGGTCGGAAGAAGC...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGACAATGCGCGCTGGTGGCAGGGGCTaGTCCCGTGGAGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LWQERWGRPHHKIQVTMRAGGRG*SRGGCW
Trigger: CCAACAGCCTCCACGGGAGCAGCCCCTGCCACCAGC...GCGCATTGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCTGGTGGCAGGGGCTaGTCCCGTGGAGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGAGGRG*SRGGCW
Trigger: CCAACAGCCTCCACGGGAGCAGCCCCTGCCACCAGC...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGCTGAGGCGACCTTCATaGGCTGAGCTGGACGCCTTA +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQLRRPS*AELDAL
Trigger: TAAGGCGTCCAGCTCAGCGCATGAAGGTCGCCTCAG...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTCCTATGCCCCCGATCTaGAAGCCTCGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SGALVAECVSVSARTVKGPMPPI*KPRGLW
Trigger: CCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGG...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGATGGACACAGGCCCATaGGCTTTCCATCCCGTGGAA +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVMDTGP*AFHPVE
Trigger: TTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCAT...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CCTGCCATGAGGGCCTGTCCCCACCCCAGAAGGAAACGAATGCCTTCAAGCCAACCACGGGAACAAGCCTaGCATGAGGGCCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PAMRACPHPRRKRMPSSQPREQA*HEGLSP
Trigger: TGGGGACAGGCCCTCATGGCAGGCTTGTTCCCGTGG...TTGGCTTGAAGGCATTCGTTTCCTTCTGGGGTGGGGACAGGCCCTCATGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCTGGCCTCCTGAGAAGCAGCCCCCACACAGCATGCTTTCTGAATGCACTGTGGGATGGGCTCGGGAGCTaGCTGCTTCGGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PGLLRSSPHTACFLNALWDGLGS*LLRGSS
Trigger: AGAAGACCCCCGAAGCAGCCAGCTCCCGAGCCCATC...CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCTGCTTCTCAGGAGGCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTGATGGGCTCGGGAGCTaGCTGCTTCGGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SGALVAECVSVSARTVKGDGLGS*LLRGSS
Trigger: AGAAGACCCCCGAAGCAGCCAGCTCCCGAGCCCATC...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCTGCCATGAGGGCCTGTCCCCACCCCAGAAGGAAACGAATGCCTTCAAGCCAAGATGGGCTCGGGAGCTaGCTGCTTCGGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PAMRACPHPRRKRMPSSQDGLGS*LLRGSS
Trigger: AGAAGACCCCCGAAGCAGCCAGCTCCCGAGCCCATC...TTGGCTTGAAGGCATTCGTTTCCTTCTGGGGTGGGGACAGGCCCTCATGGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGAACAAGATACGGACTGCGGTGCCTACGATaGGCTCGGGAGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PLPQWSEAQPRGHRTRYGLRCLR*ARELAA
Trigger: AGCAGCCAGCTCCCGAGCCCATCGTAGGCACCGCAG...TCCGTATCTTGTTCGGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGGTCCAAGAATTCACTaGACGGGGGTCTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTGPRIH*TGVWRV
Trigger: CACCCTCCAGACCCCCGTCCAGTGAATTCTTGGACC...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTTCTCCCGGCCTCCGTaGTGCCAATCTTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQFSRPP*CQSLEV
Trigger: CACCTCCAAAGATTGGCACCACGGAGGCCGGGAGAA...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGACCATCAGGGCTGGCTaGCTGCTTCTTCCGACCACT +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQTIRAG*LLLPTT
Trigger: AGTGGTCGGAAGAAGCAGCCAGCCAGCCCTGATGGT...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGACAATGCGCAGGTACTGGCAGCGCTaGGGGAGTTCCGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LWQERWGRPHHKIQVTMRRYWQR*GSSGRW
Trigger: CCAGCGGCCGGAACTCCCCCAGCGCTGCCAGTACCT...GCGCATTGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAAGGTACTGGCAGCGCTaGGGGAGTTCCGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGRYWQR*GSSGRW
Trigger: CCAGCGGCCGGAACTCCCCCAGCGCTGCCAGTACCT...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCAGTGGCAGAGGGCGTaGGCCCTGGCGTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNQWQRA*ALAWAA
Trigger: AGCTGCCCACGCCAGGGCCCACGCCCTCTGCCACTG...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCCGTGGGGGAGCCCTGTaGGGGAACTGCAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALRGGAL*GNCSGR
Trigger: TCTGCCACTGCAGTTCCCCCACAGGGCTCCCCCACG...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGTGTTGGATGTGGGTGTaGGGAACAGGCGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVCWMWV*GTGAVG
Trigger: TCCCACAGCGCCTGTTCCCCACACCCACATCCAACA...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCATGCAGACCTGCCCCTAGGGCTGTGAGGGCCGGGTaGGCCCTGACCGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TQMVYQCNVGSPCRPAPRAVRAG*ALTVQW
Trigger: CCACTGCACGGTCAGGGCCCACCCGGCCCTCACAGC...CCTAGGGGCAGGTCTGCATGGTGACCCCACATTGCACTGGTAAACCATTTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACGCTGTGAGGGCCGGGTaGGCCCTGACCGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNAVRAG*ALTVQW
Trigger: CCACTGCACGGTCAGGGCCCACCCGGCCCTCACAGC...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGCATGGCCAAGGGCGCTaGTGGCAGGGGCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGHGQGR*WQGLLP
Trigger: CGGGAGCAGCCCCTGCCACCAGCGCCCTTGGCCATG...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCATGGCCAAGGGCGCTaGTGGCAGGGGCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNHGQGR*WQGLLP
Trigger: CGGGAGCAGCCCCTGCCACCAGCGCCCTTGGCCATG...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGTGCTTGTGGGCCTGTaGCGCCGGCAGCTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGVLVGL*RRQLGD
Trigger: ATCCCCCAGCTGCCGGCGCCACAGGCCCACAAGCAC...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGGGAGGGTGCTTGTaGGCCTGTGGCGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLWGGCL*ACGAGS
Trigger: GCTGCCGGCGCCACAGGCCCACAAGCACCCTCCCCA...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGAGGGCCCCGAGAGGTaGGGAGGGTGCTTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLEGPER*GGCLWA
Trigger: GGCCCACAAGCACCCTCCCCACCTCTCGGGGCCCTC...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGGAGGGGGAGGCAGGTTaGCATTCATGGAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: NSYAPDLQASWALEHSWREGEAG*HSWRRV
Trigger: CACCCTTCTCCATGAATGCCAACCTGCCTCCCCCTC...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCAGGCGGGGGCAGGTTCTaGCTCTGGGTCAGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPGGGRF*LWVSPG
Trigger: CCCCGGGCTGACCCAGAGCCAGAACCTGCCCCCGCC...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCGCCAGGTCCCGCCGGTaGGGTAGAGGTGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLARSRR*GRGGGA
Trigger: TGCCCCTCCACCTCTACCCCACCGGCGGGACCTGGC...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACGCCAGGTCCCGCCGGTaGGGTAGAGGTGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHARSRR*GRGGGA
Trigger: TGCCCCTCCACCTCTACCCCACCGGCGGGACCTGGC...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGCCAGAGCAGGGTGGCTaGGCCGAGGTGCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGPEQGG*AEVPGP
Trigger: GGGACCTGGCACCTCGGCCCAGCCACCCTGCTCTGG...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTCGCACCAGAGCAGGGTaGCTGGGCCGAGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: WPQSVARKMGPSSPQDPSRTRAG*LGRGAR
Trigger: CCTGGCACCTCGGCCCAGCCACCCTGCTCTGGTGCG...ACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGGGGTGTCCACCACAGTaGGCTCCGGGGACGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGGCPPQ*APGTGS
Trigger: GGAGCCCGTCCCCGGAGCCCACTGTGGTGGACACCC...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGGCTTGGCCTTCTCAATaGCCTCCTCCCTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVAWPSQ*PPPSSW
Trigger: CCAAGAAGAGGGAGGAGGCCATTGAGAAGGCCAAGC...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAAGGATGGCCGCATGTaGCCAGGACCACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: NSYAPDLQASWALEHSWRKDGRM*PGPLSC
Trigger: ACAGCTCAGTGGTCCTGGCCACATGCGGCCATCCTT...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAGCAATGGTGGTTGGTaGTGGCTCGAAGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVSNGGW*WLEGWP
Trigger: CGGCCATCCTTCGAGCCACCACCAACCACCATTGCT...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCCCCGCTCGCGGATGGTaGGGTCGACGTTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALPARGW*GRRCRG
Trigger: GCCTCTACAACGTCGACCCCACCATCCGCGAGCGGG...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCTGCCATGAGGGCCTGTCCCCACCCCAGAAGGAAACGAATGCCTTCAAGCCAAGCTCCCGCTCGCGGATaGTGGGGTCGACGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: PAMRACPHPRRKRMPSSQAPARG*WGRRCR
Trigger: TCTACAACGTCGACCCCACCATCCGCGAGCGGGAGC...TTGGCTTGAAGGCATTCGTTTCCTTCTGGGGTGGGGACAGGCCCTCATGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTATCTCGGGCCGCAGCTaGGGGCCCGCCAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTISGRS*GPARAS
Trigger: ACTGGCCCTGGCGGGCCCCCAGCTGCGGCCCGAGAT...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGGTGGGCTGCTGACATaGGGGGTGGGATGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALGGLLT*GVGWPQ
Trigger: CTGGGGCCATCCCACCCCCCATGTCAGCAGCCCACC...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTGCTCACCGTATTTCTTaGAGTGGATGCGACAGTCGG +
Preference number: 4 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSAHRIS*SGCDSR
Trigger: CCGACTGTCGCATCCACTTCAAGAAATACGGTGAGC...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTTGCTATGCTTCCCACTaGGCCCATCATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSCYASH*AHHPLP
Trigger: AGGAAGAGGATGATGGGCTCAGTGGGAAGCATAGCA...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTCATCTGCTGCTGGGCTaGCGAGTCCGAGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: SGALVAECVSVSARTVKGHLLLG*RVRVTL
Trigger: GAGAGTGACTCGGACTCGTCAGCCCAGCAGCAGATG...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACAGGAGGGAGCTGGGGTaGCCCCAGTGGGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHRRELG*PQWEPA
Trigger: TGCAGGCTCCCACTGGGGTCACCCCAGCTCCCTCCT...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCCCAGAGCCTCCTCCTTaGTCTGGACGGTGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALPEPPP*SGRWGV
Trigger: CACTCCCCACCGTCCAGATCAAGGAGGAGGCTCTGG...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGTTTGTAGAACCTAGCTaGCTGGCTGGCGTGACTGGG +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVFVEPS*LAGVTG
Trigger: CCCAGTCACGCCAGCCAGTCAGCTAGGTTCTACAAA...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCGACCTTCATGCGCTaGGCTGGACGCCTTAGCCGC +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGATFMR*AGRLSR
Trigger: GCGGCTAAGGCGTCCAGCTCAGCGCATGAAGGTCGC...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGGGTTGGTGGGCGACATaGCGTGGGGCCGGGCGTACT +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGGWWAT*RGAGRT
Trigger: AGTACGCCCGGCCCCACGTCATGTCGCCCACCAACC...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CAGGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGGGTCGACCAGCGGGTaGACGGGGCCTGCTGAACCT +
Preference number: 4 (lower is better)
Translates to: QDLPCSKVASICGKKDGAGSTSG*TGPAEP
Trigger: AGGTTCAGCAGGCCCCGTTCACCCGCTGGTCGACCC...GGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGGATGCTCGCTGCTGTaGCCAGGCCTCGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALGCSLL*PGLGPS
Trigger: GCTTGGACCGAGGCCTGGTCACAGCAGCGAGCATCC...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGGATGCTCGCTGCTGTaGCCAGGCCTCGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGGCSLL*PGLGPS
Trigger: GCTTGGACCGAGGCCTGGTCACAGCAGCGAGCATCC...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGCTGAGGGGGCTTCCCTaGCGTGACCTTTCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSLRGLP*RDLSCD
Trigger: GTCGCAGGAAAGGTCACGGCAGGGAAGCCCCCTCAG...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR GCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGCGTGTCCTCATGCTATaGTTCCCACTGAGCCCATCA +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVRVLML*FPLSPS
Trigger: TGATGGGCTCAGTGGGAAGCATAGCATGAGGACACG...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTCTGCTTTACTGTCATTaGTGGAGGTACTGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSLLYCH*WRYWQR
Trigger: GCGCTGCCAGTACCTCCAGCAATGACAGTAAAGCAG...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGGCCCTGTGGGGGAACTaGAGTGGCAGAGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGALWGN*SGRGRG
Trigger: CCCACGCCCTCTGCCACTGCAGTTCCCCCACAGGGC...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGCTGGGCATGAGAGGGTaGAGAAGGCTGGCCCGCCGA +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALLGMRG*RRLARR
Trigger: TCGGCGGGCCAGCCTTCTGCACCCTCTCATGCCCAG...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGGTGTGAGGGTACGCTaGTGCTGGGGAGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGGVRVR*CWGGPQ
Trigger: CTGGGGACCTCCCCAGCAGCAGCGTACCCTCACACC...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCCTGTGCCGGGCAAAGTaGTCCATGGGGTTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALLCRAK*SMGLAA
Trigger: AGCCGCCAACCCCATGGAGCACTTTGCCCGGCACAG...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGAACAAGATACGGACGATGCCATGCGCTCTaGGTGGATACGCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: PLPQWSEAQPRGHRTRYGRCHAL*VDTLGC
Trigger: GCAGCCGAGCGTATCCACGCAGAGCGCATGGCATCG...TCCGTATCTTGTTCGGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTTGGCGAAGCATCTCGTaGTCGTGTGGGGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SGALVAECVSVSARTVKGWRSIS*SCGGCP
Trigger: TGGACAGCCCCCACACGAGCACGAGATGCTTCGCCA...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGAACAAGATACGGATCCATGGCCAGTCTCTaGAGCTCGGCCGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: PLPQWSEAQPRGHRTRYGSMASL*SSADWA
Trigger: TGCCCAGTCGGCCGAGCTGCAGAGACTGGCCATGGA...TCCGTATCTTGTTCGGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CCTGGCCTCCTGAGAAGCAGCCCCCACACAGCATGCTTTCTGAATGCACTGTGGCCATGCAGCCACTGCTaGTCCATGGCCAGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PGLLRSSPHTACFLNALWPCSHC*SMASLC
Trigger: GCAGAGACTGGCCATGGAGCAGCAGTGGCTGCATGG...CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCTGCTTCTCAGGAGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCCCTATGCCCCCGATCTaGAAGCCTCGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALPMPPI*KPRGLW
Trigger: CCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGG...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGACCCTGGATGCTCGCTaGTGTGACCAGGCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSTLDAR*CDQASV
Trigger: GACCGAGGCCTGGTCACAGCAGCGAGCATCCAGGGT...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCTCCGAGTGTGCACGCTaGCTCTGCCGCAGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALSECAR*LCRSGV
Trigger: CACTCCACTGCGGCAGAGGCAGCGTGCACACTCGGA...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GGCAGGAAGCAGGGCCGACAGAGGGCAGACACCCCAGAACACCCGCCCTCAGCCACCAGTTCCTCATGTTaGGTCACTGTATCACCATCT +
Preference number: 4 (lower is better)
Translates to: GRKQGRQRADTPEHPPSATSSSC*VTVSPS
Trigger: AGATGGTGATACAGTGACCCAACATGAGGAACTGGT...GGCTGAGGGCGGGTGTTCTGGGGTGTCTGCCCTCTGTCGGCCCTGCTTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCTGCCATGAGGGCCTGTCCCCACCCCAGAAGGAAACGAATGCCTTCAAGCCAACATTGCTGGAGGTACTaGCAGCGCTGGGGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: PAMRACPHPRRKRMPSSQHCWRY*QRWGSS
Trigger: GGAACTCCCCCAGCGCTGCCAGTACCTCCAGCAATG...TTGGCTTGAAGGCATTCGTTTCCTTCTGGGGTGGGGACAGGCCCTCATGGCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTTGTCTTCTTGGAGCTaGTCCTGTCAGCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQLSSWS*SCQPPP
Trigger: CGGAGGAGGCTGACAGGACCAGCTCCAAGAAGACAA...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGTTGTCTTCTTGGAGCTaGTCCTGTCAGCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: NSYAPDLQASWALEHSWRLSSWS*SCQPPP
Trigger: CGGAGGAGGCTGACAGGACCAGCTCCAAGAAGACAA...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGCCTGGTCGATGTCTTTaGGGTCACTGCTACCCTCAT +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVPGRCL*GHCYPH
Trigger: ATGAGGGTAGCAGTGACCCCAAAGACATCGACCAGG...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCGCCCTGACCGTGCAGTaGGGGCTGGGCATGAGAGGG +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLALTVQ*GLGMRG
Trigger: CCCTCTCATGCCCAGCCCCCACTGCACGGTCAGGGC...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCAGCTGTGAGGGCCGGGTaGGCCCTGACCGTGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPAVRAG*ALTVQW
Trigger: CCACTGCACGGTCAGGGCCCACCCGGCCCTCACAGC...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGGAGGCCAAAGGGCTGTaGGGGGCCTGGGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGEAKGL*GAWVLQ
Trigger: CTGCAGCACCCAGGCCCCCCACAGCCCTTTGGCCTC...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACAGGGTACGCTGCTGCTaGGGAGGTCCCCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNRVRCC*GGPQRG
Trigger: GCCCCTCTGGGGACCTCCCCAGCAGCAGCGTACCCT...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTGTGGCGCCGGCAGCTaGGGGATGGGAGTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: ISLAQKWPQSVARKMGPSCGAGS*GMGVVG
Trigger: GCCTACCACTCCCATCCCCCAGCTGCCGGCGCCACA...GGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCGTGCTTGTGGGCCTGTaGCGCCGGCAGCTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: ISLAQKWPQSVARKMGPSVLVGL*RRQLGD
Trigger: ATCCCCCAGCTGCCGGCGCCACAGGCCCACAAGCAC...GGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGGTGCTTGTGGGCCTGTaGCGCCGGCAGCTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGVLVGL*RRQLGD
Trigger: ATCCCCCAGCTGCCGGCGCCACAGGCCCACAAGCAC...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCTGGCCTCCTGAGAAGCAGCCCCCACACAGCATGCTTTCTGAATGCACTGTGGGCAGGTTGGCATTCATaGAGAAGGGTGAGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: PGLLRSSPHTACFLNALWAGWHS*RRVRAP
Trigger: CGGGGCCCTCACCCTTCTCCATGAATGCCAACCTGC...CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCTGCTTCTCAGGAGGCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGCCAGGTCCCGCCGGTaGGGTAGAGGTGGAGGGGCA +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTARSRR*GRGGGA
Trigger: TGCCCCTCCACCTCTACCCCACCGGCGGGACCTGGC...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGCCAGAGCAGGGTGGCTaGGCCGAGGTGCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLPEQGG*AEVPGP
Trigger: GGGACCTGGCACCTCGGCCCAGCCACCCTGCTCTGG...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGGTGGGCGACATGACGTaGGGCCGGGCGTACTCGCTC +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGVGDMT*GRAYSL
Trigger: GAGCGAGTACGCCCGGCCCCACGTCATGTCGCCCAC...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCGTGGGCGACATGACGTaGGGCCGGGCGTACTCGCTC +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLVGDMT*GRAYSL
Trigger: GAGCGAGTACGCCCGGCCCCACGTCATGTCGCCCAC...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCCATGGGGTTGGCGGCTaGGTGCAGGGGGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ISLAQKWPQSVARKMGPSHGVGG*VQGVQL
Trigger: GAGCTGGACCCCCTGCACCCAGCCGCCAACCCCATG...GGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGGGCCAGGGGATCGCTaGTCAGCGATGCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGGPGDR*SAMPCA
Trigger: AGCGCATGGCATCGCTGACCAGCGATCCCCTGGCCC...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGGGGAAGCGAGCCAGGTaGGGACCGGCAGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLGKRAR*GPAVRG
Trigger: CCCCCTGACTGCCGGTCCCCACCTGGCTCGCTTCCC...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGGTGGGCTGCTGACATaGGGGGTGGGATGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLGGLLT*GVGWPQ
Trigger: CTGGGGCCATCCCACCCCCCATGTCAGCAGCCCACC...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGCCTCTGTCCATGTaGAACGCCCCTTTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVKPLSM*NAPLLP
Trigger: AGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTT...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTGTTACGGCTGCAGCCTaGAAACGAGGGCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SGALVAECVSVSARTVKGVTAAA*KRGQAL
Trigger: GAGAGCCTGCCCTCGTTTCCAGGCTGCAGCCGTAAC...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGTGCTATGCTTCCCACTaGGCCCATCATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVCYASH*AHHPLP
Trigger: AGGAAGAGGATGATGGGCTCAGTGGGAAGCATAGCA...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGCGGATGTCTTCATTaGTGGGTGAGGTGCGACCAT +
Preference number: 4 (lower is better)
Translates to: NSYAPDLQASWALEHSWRSGCLH*WVRCDH
Trigger: ATGGTCGCACCTCACCCATCAATGAAGACATCCGCT...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGAACAAGATACGGACATCTGCTGCTGGGCTaGCGAGTCCGAGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: PLPQWSEAQPRGHRTRYGHLLLG*RVRVTL
Trigger: GAGAGTGACTCGGACTCGTCAGCCCAGCAGCAGATG...TCCGTATCTTGTTCGGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTAGGAGGGAGCTGGGGTaGCCCCAGTGGGAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTRRELG*PQWEPA
Trigger: TGCAGGCTCCCACTGGGGTCACCCCAGCTCCCTCCT...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTGAGACCTCCAGTGTCTaGGAGAAAAGGATCGGAAGA +
Preference number: 4 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSETSSV*EKRIGR
Trigger: TCTTCCGATCCTTTTCTCTCAGACACTGGAGGTCTC...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGCCGCCATGCTCCTTaGTGCCCTCAAGTACATAAG +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQCRHAP*CPQVHK
Trigger: CTTATGTACTTGAGGGCAGCAAGGAGCATGGCGGCA...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp CCTGCCATGAGGGCCTGTCCCCACCCCAGAAGGAAACGAATGCCTTCAAGCCAAGGCGCTGCAGGGCTTTaGCAGCATCGTAACCGCTTT +
Preference number: 4 (lower is better)
Translates to: PAMRACPHPRRKRMPSSQGAAGL*QHRNRF
Trigger: AAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCC...TTGGCTTGAAGGCATTCGTTTCCTTCTGGGGTGGGGACAGGCCCTCATGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTACGGCCTGCCTGCGGTaGCTACGATGGGCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTTACLR*LRWARE
Trigger: CTCCCGAGCCCATCGTAGGCACCGCAGGCAGGCCGT...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGGCCCTGTGGGGGAACTaGAGTGGCAGAGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAEALWGN*SGRGRG
Trigger: CCCACGCCCTCTGCCACTGCAGTTCCCCCACAGGGC...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACGACCCAGTCAGAGGCTaGAGCGGGGGATGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHDPVRG*SGGCGE
Trigger: CTCGCCACATCCCCCGCTGCAGCCTCTGACTGGGTC...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCGACCCAGTCAGAGGCTaGAGCGGGGGATGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: ISLAQKWPQSVARKMGPSDPVRG*SGGCGE
Trigger: CTCGCCACATCCCCCGCTGCAGCCTCTGACTGGGTC...GGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGGACCCAGTCAGAGGCTaGAGCGGGGGATGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGDPVRG*SGGCGE
Trigger: CTCGCCACATCCCCCGCTGCAGCCTCTGACTGGGTC...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACCTGGGCATGAGAGGGTaGAGAAGGCTGGCCCGCCGA +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHLGMRG*RRLARR
Trigger: TCGGCGGGCCAGCCTTCTGCACCCTCTCATGCCCAG...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCGTGAGGGTACGCTGCTaGTGGGGAGGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ISLAQKWPQSVARKMGPSVRVRC*WGGPQR
Trigger: CCTCTGGGGACCTCCCCAGCAGCAGCGTACCCTCAC...GGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCGGTGTGAGGGTACGCTaGTGCTGGGGAGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ISLAQKWPQSVARKMGPSGVRVR*CWGGPQ
Trigger: CTGGGGACCTCCCCAGCAGCAGCGTACCCTCACACC...GGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGAGAGGTGGGGAGGGTaGTTGTGGGCCTGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: MFSPVQDSLSFWGTVMQGERWGG*LWACGA
Trigger: GGCGCCACAGGCCCACAAGCACCCTCCCCACCTCTC...TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACACTTAGCCGCCCGCTCTaGCTCGCGCTCCCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTLSRPL*LALPLS
Trigger: CGAGAGCGGGAGCGCGAGGCAGAGCGGGCGGCTAAG...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGAACAAGATACGGATGGCGAAGCATCTCGTaGTCGTGTGGGGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PLPQWSEAQPRGHRTRYGWRSIS*SCGGCP
Trigger: TGGACAGCCCCCACACGAGCACGAGATGCTTCGCCA...TCCGTATCTTGTTCGGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGACAATGCGCTGGGCATGCATGGCCTaGAGCTGGTGGGCTGCTGAC +
Preference number: 4 (lower is better)
Translates to: LWQERWGRPHHKIQVTMRWACMA*SWWAAD
Trigger: GTCAGCAGCCCACCAGCTGCAGGCCATGCATGCCCA...GCGCATTGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGGGTAGGTGGCCACCATaGATGTGGGGGTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSGRWPP*MWGCPC
Trigger: GCATGGACACCCCCACATGCATGGTGGCCACCTACC...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGACAATGCGCCCACGGGAACAAGCCTaGCATGAGGGCCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LWQERWGRPHHKIQVTMRPREQA*HEGLSP
Trigger: TGGGGACAGGCCCTCATGGCAGGCTTGTTCCCGTGG...GCGCATTGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGGTGGGGGCCTGGATaGAGGAGTCTGGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGRWGPG*RSLGAQ
Trigger: CTGGGCTCCCAGACTCCTGCATCCAGGCCCCCACCT...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGAGGTGGGGGCCTGGATaGAGGAGTCTGGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLRWGPG*RSLGAQ
Trigger: CTGGGCTCCCAGACTCCTGCATCCAGGCCCCCACCT...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCAGGTGGGGGCCTGGATaGAGGAGTCTGGGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLRWGPG*RSLGAQ
Trigger: CTGGGCTCCCAGACTCCTGCATCCAGGCCCCCACCT...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ACAGGCACTCTGGTCTCCCGCCTACCCCATGCAGGATGGCTATCCCCATGCAGAGACAGGGTCTTGCTCTaGCACCTAGGCTACAGTGGT +
Preference number: 4 (lower is better)
Translates to: TGTLVSRLPHAGWLSPCRDRVLL*HLGYSG
Trigger: ACCACTGTAGCCTAGGTGGCAGAGCAAGACCCTGTC...TCTGCATGGGGATAGCCATCCTGCATGGGGTAGGCGGGAGACCAGAGTGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGACACGAATCTCCCCCTaGGTACTGTTCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVTRISP*VLFSLL
Trigger: AAGGAGGCTGAACAGTACCCAGGGGGAGATTCGTGT...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGTGGTGGTGAAGCAGTaGCGGCAGGCGTACCCCTTC +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALVVVKQ*RQAYPF
Trigger: GAAGGGGTACGCCTGCCGCCACTGCTTCACCACCAC...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGCATTGTCCTGGGGGCTaGGGATGCTCGGGGACGTGC +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGHCPGG*GCSGTC
Trigger: GCACGTCCCCGAGCATCCCCAGCCCCCAGGACAATG...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCCATTGTCCTGGGGGCTaGGGATGCTCGGGGACGTGC +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLHCPGG*GCSGTC
Trigger: GCACGTCCCCGAGCATCCCCAGCCCCCAGGACAATG...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCCAGTGGCAGAGGGCGTaGGCCCTGGCGTGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVQWQRA*ALAWAA
Trigger: AGCTGCCCACGCCAGGGCCCACGCCCTCTGCCACTG...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGGGTGCCTGTTGGATGTaGGTGTGGGGAACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSGACWM*VWGTGA
Trigger: AGCGCCTGTTCCCCACACCCACATCCAACAGGCACC...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGCCCTGACCGTGCAGTaGGGGCTGGGCATGAGAGGG +
Preference number: 4 (lower is better)
Translates to: MFSPVQDSLSFWGTVMQGALTVQ*GLGMRG
Trigger: CCCTCTCATGCCCAGCCCCCACTGCACGGTCAGGGC...TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGGCCCTGACCGTGCAGTaGGGGCTGGGCATGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLALTVQ*GLGMRG
Trigger: CCCTCTCATGCCCAGCCCCCACTGCACGGTCAGGGC...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCAGAGGCCAAAGGGCTGTaGGGGGCCTGGGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPEAKGL*GAWVLQ
Trigger: CTGCAGCACCCAGGCCCCCCACAGCCCTTTGGCCTC...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCTGTCCTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGAGGGTACGCTGCTGCTaGGGAGGTCCCCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SVLQFLGWDQHNGRRDLQRVRCC*GGPQRG
Trigger: GCCCCTCTGGGGACCTCCCCAGCAGCAGCGTACCCT...CTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAAGGGTACGCTGCTGCTaGGGAGGTCCCCAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: MFSPVQDSLSFWGTVMQGRVRCC*GGPQRG
Trigger: GCCCCTCTGGGGACCTCCCCAGCAGCAGCGTACCCT...TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCCAGGGGCTGCTCCCGTaGAGGCTGTTGGGACTGCAG +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLQGLLP*RLLGLQ
Trigger: CTGCAGTCCCAACAGCCTCCACGGGAGCAGCCCCTG...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTCAGGGGCTGCTCCCGTaGAGGCTGTTGGGACTGCAG +
Preference number: 4 (lower is better)
Translates to: WPQSVARKMGPSSPQDPSQGLLP*RLLGLQ
Trigger: CTGCAGTCCCAACAGCCTCCACGGGAGCAGCCCCTG...ACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTCATGGCCAAGGGCGCTaGTGGCAGGGGCTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSHGQGR*WQGLLP
Trigger: CGGGAGCAGCCCCTGCCACCAGCGCCCTTGGCCATG...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTCCAGAGCAGGGTGGCTaGGCCGAGGTGCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSPEQGG*AEVPGP
Trigger: GGGACCTGGCACCTCGGCCCAGCCACCCTGCTCTGG...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCCTCCTCCTTGATCTaGACGGTGGGGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGASSLI*TVGSGQ
Trigger: CTGCCCACTCCCCACCGTCCAGATCAAGGAGGAGGC...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTAGGACCACTGAGCTGTaGGTCACTGAGGCGACCTTC +
Preference number: 4 (lower is better)
Translates to: SGALVAECVSVSARTVKGRTTEL*VTEATF
Trigger: GAAGGTCGCCTCAGTGACCCACAGCTCAGTGGTCCT...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGACAATGCGCTGGTGGCTCGAAGGATaGCCGCATGTGGCCAGGACC +
Preference number: 4 (lower is better)
Translates to: LWQERWGRPHHKIQVTMRWWLEG*PHVART
Trigger: GGTCCTGGCCACATGCGGCCATCCTTCGAGCCACCA...GCGCATTGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCTGGCCTCCTGAGAAGCAGCCCCCACACAGCATGCTTTCTGAATGCACTGTGGAGCAATGGTGGTTGGTaGTGGCTCGAAGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: PGLLRSSPHTACFLNALWSNGGW*WLEGWP
Trigger: CGGCCATCCTTCGAGCCACCACCAACCACCATTGCT...CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCTGCTTCTCAGGAGGCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGGGGCACAGCAGCAATaGTGGTTGGTGGTGGCTCGA +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALGAQQQ*WLVVAR
Trigger: TCGAGCCACCACCAACCACCATTGCTGCTGTGCCCC...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGTGCTCCATGGGGTTaGCGGCTGGGTGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGSAPWG*RLGAGG
Trigger: ACCCCCTGCACCCAGCCGCCAACCCCATGGAGCACT...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGGGCAAAGTGCTCCATaGGGTTGGCGGCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALGQSAP*GWRLGA
Trigger: TGCACCCAGCCGCCAACCCCATGGAGCACTTTGCCC...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTGGGTTCAGGCCCGGGTaGAAAGAAGCAAAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: SGALVAECVSVSARTVKGGFRPG*KEAKGW
Trigger: CCACCCTTTTGCTTCTTTCCACCCGGGCCTGAACCC...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGACAATGCGCGCCATGCGCTCTGCGTaGATACGCTCGGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LWQERWGRPHHKIQVTMRAMRSA*IRSAAS
Trigger: ACTGGCAGCCGAGCGTATCCACGCAGAGCGCATGGC...GCGCATTGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGCATCTCGTGCTCGTGTaGGGGCTGTCCAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSHLVLV*GLSKQR
Trigger: CCTCTGCTTGGACAGCCCCCACACGAGCACGAGATG...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGCCGAAAACTGGGTaGCGAAGCATCTCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: SGALVAECVSVSARTVKGVPKTG*RSISCS
Trigger: CGAGCACGAGATGCTTCGCCACCCAGTTTTCGGCAC...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAAAGCCTCGTGGGCTCTaGAGCACTCGTGGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGKPRGL*STRGGV
Trigger: CACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTT...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGGGCAGGCATATGTCCTaGGTCACTTGTGTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVGRHMS*VTCVLS
Trigger: ACTCAGCACACAAGTGACCCAGGACATATGCCTGCC...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCAGTGGCCTCAATCTGTaGCAAGAAAGATGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTSGLNL*QERWGR
Trigger: ACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACT...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GGCAGGAAGCAGGGCCGACAGAGGGCAGACACCCCAGAACACCCGCCCTCAGCCGACTCGACTCTTCTTTaGAAAAATGGATGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GRKQGRQRADTPEHPPSADSTLL*KNGCQR
Trigger: CCTTTGGCATCCATTTTTCCAAAGAAGAGTCGAGTC...GGCTGAGGGCGGGTGTTCTGGGGTGTCTGCCCTCTGTCGGCCCTGCTTCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGCCGAAGGAAACCGAGTaGTTGGGCTTCAAAGACACC +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVPKETE*LGFKDT
Trigger: GGTGTCTTTGAAGCCCAACCACTCGGTTTCCTTCGG...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCCCGAAGGAAACCGAGTaGTTGGGCTTCAAAGACACC +
Preference number: 4 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTPKETE*LGFKDT
Trigger: GGTGTCTTTGAAGCCCAACCACTCGGTTTCCTTCGG...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCAAGCTGCAGGGAGGTGTaGGGGTACGCTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPSCREV*GYAAAG
Trigger: CCCAGCAGCAGCGTACCCTCACACCTCCCTGCAGCT...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGGACTGCAGCGCTGACTaGGAGGCTGGCAGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLDCSAD*EAGSCR
Trigger: CCTGCAGCTGCCAGCCTCTCAGTCAGCGCTGCAGTC...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGGCAATGGCTGGCTCTaGGGCATGAGTTGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALGNGWL*GMSCRG
Trigger: ACCCCTGCAACTCATGCCTCAGAGCCAGCCATTGCC...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp ACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCATGCAGACCTGCCCCTAGGCCAGAGCCTCCTCCTTaGTCTGGACGGTGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: TQMVYQCNVGSPCRPAPRPEPPP*SGRWGV
Trigger: CACTCCCCACCGTCCAGATCAAGGAGGAGGCTCTGG...CCTAGGGGCAGGTCTGCATGGTGACCCCACATTGCACTGGTAAACCATTTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCACCCGGCCAGAGGCATaGAGTACAGGTCTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLTRPEA*STGLSG
Trigger: CCCGGACAGACCTGTACTTCATGCCTCTGGCCGGGT...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTGGTTGGTGGGCGACATaGCGTGGGGCCGGGCGTACT +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSGWWAT*RGAGRT
Trigger: AGTACGCCCGGCCCCACGTCATGTCGCCCACCAACC...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCGGGTCGACCAGCGGGTaGACGGGGCCTGCTGAACCT +
Preference number: 4 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVGSTSG*TGPAEP
Trigger: AGGTTCAGCAGGCCCCGTTCACCCGCTGGTCGACCC...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp ATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGGATGCTCGCTGCTGTaGCCAGGCCTCGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: MFSPVQDSLSFWGTVMQGGCSLL*PGLGPS
Trigger: GCTTGGACCGAGGCCTGGTCACAGCAGCGAGCATCC...TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCAGGATGCTCGCTGCTGTaGCCAGGCCTCGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPGCSLL*PGLGPS
Trigger: GCTTGGACCGAGGCCTGGTCACAGCAGCGAGCATCC...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTAAAATGGAAGAGGTCTaGTGGAGCAGATGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSKMEEV*WSRCLC
Trigger: GCACAGACATCTGCTCCATCAGACCTCTTCCATTTT...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CCTGGCCTCCTGAGAAGCAGCCCCCACACAGCATGCTTTCTGAATGCACTGTGGTGCCGTGACCTTTCCTaGGACTTGAACCTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PGLLRSSPHTACFLNALWCRDLS*DLNLGS
Trigger: GGAGCCTAGGTTCAAGTCGCAGGAAAGGTCACGGCA...CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCTGCTTCTCAGGAGGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR GCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGCTGAGGGGGCTTCCCTaGCGTGACCTTTCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGLRGLP*RDLSCD
Trigger: GTCGCAGGAAAGGTCACGGCAGGGAAGCCCCCTCAG...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR GCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCCTCCTGAACACGGCCTaGCTGCGGTGCCTACGATGG +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLLLNTA*LRCLRW
Trigger: CCATCGTAGGCACCGCAGGCAGGCCGTGTTCAGGAG...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGTCCCGGCCTCCGTGGTaGCAATCTTTGGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALSRPPW*QSLEVV
Trigger: CACCACCTCCAAAGATTGGCACCACGGAGGCCGGGA...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGATCCCGGCCTCCGTGGTaGCAATCTTTGGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGSRPPW*QSLEVV
Trigger: CACCACCTCCAAAGATTGGCACCACGGAGGCCGGGA...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCGCCCTGTGGGGGAACTaGAGTGGCAGAGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTALWGN*SGRGRG
Trigger: CCCACGCCCTCTGCCACTGCAGTTCCCCCACAGGGC...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCATGCAGACCTGCCCCTAGGGGGGTGCAAGGCCGGTaGCTGTTGGATGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: TQMVYQCNVGSPCRPAPRGVQGR*LLDVGV
Trigger: CACACCCACATCCAACAGGCACCGGCCTTGCACCCC...CCTAGGGGCAGGTCTGCATGGTGACCCCACATTGCACTGGTAAACCATTTGAGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGGGGGTGCAAGGCCGGTaGCTGTTGGATGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGGVQGR*LLDVGV
Trigger: CACACCCACATCCAACAGGCACCGGCCTTGCACCCC...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGGGCGGCCGCTGGGGGTaGAAGGCCGGTGCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKGGRWG*KAGACW
Trigger: CCAACAGGCACCGGCCTTGCACCCCCAGCGGCCGCC...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGGTGAGGGTACGCTGCTaGTGGGGAGGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLVRVRC*WGGPQR
Trigger: CCTCTGGGGACCTCCCCAGCAGCAGCGTACCCTCAC...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGCTGGTGGCAGGGGCTaGTCCCGTGGAGGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTAGGRG*SRGGCW
Trigger: CCAACAGCCTCCACGGGAGCAGCCCCTGCCACCAGC...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCGAGAGGTGGGGAGGGTaGTTGTGGGCCTGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVERWGG*LWACGA
Trigger: GGCGCCACAGGCCCACAAGCACCCTCCCCACCTCTC...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGCTGTGCCGGGCAAAGTaGTCCATGGGGTTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGLCRAK*SMGLAA
Trigger: AGCCGCCAACCCCATGGAGCACTTTGCCCGGCACAG...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCCTGTGCCGGGCAAAGTaGTCCATGGGGTTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLLCRAK*SMGLAA
Trigger: AGCCGCCAACCCCATGGAGCACTTTGCCCGGCACAG...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGATGGTGAGGGCGCTGTaGCGGGCAAAGTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALMVRAL*RAKCSM
Trigger: CATGGAGCACTTTGCCCGGCACAGCGCCCTCACCAT...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGGTGGATACGCTCGGCTaGCAGTCTGTCAGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSVDTLG*QSVRVA
Trigger: AGCTACCCTGACAGACTGGCAGCCGAGCGTATCCAC...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCTGGTCAGCGATGCCATaGGCTCTGCGTGGATACGCT +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALWSAMP*ALRGYA
Trigger: AGCGTATCCACGCAGAGCGCATGGCATCGCTGACCA...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGAACAAGATACGGAATCGCTGGTCAGCGATaGCATGCGCTCTGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: PLPQWSEAQPRGHRTRYGIAGQR*HALCVD
Trigger: ATCCACGCAGAGCGCATGGCATCGCTGACCAGCGAT...TCCGTATCTTGTTCGGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTCACGTTGAACATCTaGAGTCGGGCCAGGGGATCG +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALVTLNI*SRARGS
Trigger: CGATCCCCTGGCCCGACTGCAGATGTTCAACGTGAC...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACTCCATGGCCAGTCTCTaGAGCTCGGCCGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHSMASL*SSADWA
Trigger: TGCCCAGTCGGCCGAGCTGCAGAGACTGGCCATGGA...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGACAATGCGCCCATGCAGCCACTGCTaGTCCATGGCCAGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LWQERWGRPHHKIQVTMRPCSHC*SMASLC
Trigger: GCAGAGACTGGCCATGGAGCAGCAGTGGCTGCATGG...GCGCATTGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCATGTGGGGGTGTCCATaGAGCCACTGCTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALMWGCP*SHCCSM
Trigger: CATGGAGCAGCAGTGGCTGCATGGACACCCCCACAT...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACACCCTGGATGCTCGCTaGTGTGACCAGGCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNTLDAR*CDQASV
Trigger: GACCGAGGCCTGGTCACAGCAGCGAGCATCCAGGGT...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ACAGGCACTCTGGTCTCCCGCCTACCCCATGCAGGATGGCTATCCCCATGCAGACTTGGGCCAGCACATTaGAGATGCTCAACAGCCACA +
Preference number: 4 (lower is better)
Translates to: TGTLVSRLPHAGWLSPCRLGPAH*RCSTAT
Trigger: TGTGGCTGTTGAGCATCTGCAATGTGCTGGCCCAAG...TCTGCATGGGGATAGCCATCCTGCATGGGGTAGGCGGGAGACCAGAGTGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGGATGGGCTCGGGAGCTaGCTGCTTCGGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGDGLGS*LLRGSS
Trigger: AGAAGACCCCCGAAGCAGCCAGCTCCCGAGCCCATC...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGCTGCGGTGCCTACGATaGGCTCGGGAGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAELRCLR*ARELAA
Trigger: AGCAGCCAGCTCCCGAGCCCATCGTAGGCACCGCAG...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCACTGCGGTGCCTACGATaGGCTCGGGAGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPLRCLR*ARELAA
Trigger: AGCAGCCAGCTCCCGAGCCCATCGTAGGCACCGCAG...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGACAATGCGCCATTGCTGGAGGTACTaGCAGCGCTGGGGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: LWQERWGRPHHKIQVTMRHCWRY*QRWGSS
Trigger: GGAACTCCCCCAGCGCTGCCAGTACCTCCAGCAATG...GCGCATTGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGCCTCCTTCACCTTCTTaGCCGACTTCTTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: NSYAPDLQASWALEHSWRPPSPS*PTSSLS
Trigger: AGACAGTGAAGAAGTCGGCCAAGAAGGTGAAGGAGG...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTCATTGTCCTGGGGGCTaGGGATGCTCGGGGACGTGC +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTHCPGG*GCSGTC
Trigger: GCACGTCCCCGAGCATCCCCAGCCCCCAGGACAATG...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCTGTCCTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGCAAGGCTGGGGGCTaGGCCTGCAGCATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVLQFLGWDQHNGRRDLQCKAGG*ACSICC
Trigger: GCAGCAGATGCTGCAGGCCCAGCCCCCAGCCTTGCA...CTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCAGAGGGTGCAGAAGGCTaGCCCGCCGACCCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPEGAEG*PADPVR
Trigger: TCTGACTGGGTCGGCGGGCCAGCCTTCTGCACCCTC...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTCAGGGGCTGCTCCCGTaGAGGCTGTTGGGACTGCAG +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTQGLLP*RLLGLQ
Trigger: CTGCAGTCCCAACAGCCTCCACGGGAGCAGCCCCTG...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGGCCTCCTCCTTGATCTaGACGGTGGGGAGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGASSLI*TVGSGQ
Trigger: CTGCCCACTCCCCACCGTCCAGATCAAGGAGGAGGC...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATGGGTGTCCACCACAGTaGGCTCCGGGGACGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYGCPPQ*APGTGS
Trigger: GGAGCCCGTCCCCGGAGCCCACTGTGGTGGACACCC...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CAGGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCCCTCCTCCCTCTTCTTaGCCAGCTTGGACCCGGCCA +
Preference number: 4 (lower is better)
Translates to: QDLPCSKVASICGKKDGAPPPSS*PAWTRP
Trigger: TGGCCGGGTCCAAGCTGGCCAAGAAGAGGGAGGAGG...GGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGACCCGCTCGCGGATGGTaGGGTCGACGTTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: MFSPVQDSLSFWGTVMQGPARGW*GRRCRG
Trigger: GCCTCTACAACGTCGACCCCACCATCCGCGAGCGGG...TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTCATGGGGTTGGCGGCTaGGTGCAGGGGGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSHGVGG*VQGVQL
Trigger: GAGCTGGACCCCCTGCACCCAGCCGCCAACCCCATG...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCAAGTGCTCCATGGGGTTaGCGGCTGGGTGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPSAPWG*RLGAGG
Trigger: ACCCCCTGCACCCAGCCGCCAACCCCATGGAGCACT...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGGGGCAAAGTGCTCCATaGGGTTGGCGGCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGGQSAP*GWRLGA
Trigger: TGCACCCAGCCGCCAACCCCATGGAGCACTTTGCCC...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGCCATGCGCTCTGCGTaGATACGCTCGGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: WPQSVARKMGPSSPQDPSAMRSA*IRSAAS
Trigger: ACTGGCAGCCGAGCGTATCCACGCAGAGCGCATGGC...ACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCATGCAGACCTGCCCCTAGGGCCATGCGCTCTGCGTaGATACGCTCGGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: TQMVYQCNVGSPCRPAPRAMRSA*IRSAAS
Trigger: ACTGGCAGCCGAGCGTATCCACGCAGAGCGCATGGC...CCTAGGGGCAGGTCTGCATGGTGACCCCACATTGCACTGGTAAACCATTTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGCCTGCTGAACCTTGGTaGAGGGGGTCCTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLPAEPW*RGSCWW
Trigger: CCACCAGCAGGACCCCCTCCACCAAGGTTCAGCAGG...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCGGTGGGCTGCTGACATaGGGGGTGGGATGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTGGLLT*GVGWPQ
Trigger: CTGGGGCCATCCCACCCCCCATGTCAGCAGCCCACC...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGACAATGCGCTGGCCACCATGCATGTaGGGGTGTCCATGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LWQERWGRPHHKIQVTMRWPPCM*GCPCSH
Trigger: GTGGCTGCATGGACACCCCCACATGCATGGTGGCCA...GCGCATTGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGAACAAGATACGGAGCTCTGGAGCACTCGTaGCGGAGTGTGTCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: PLPQWSEAQPRGHRTRYGALEHS*RSVSVC
Trigger: ACACACTGACACACTCCGCCACGAGTGCTCCAGAGC...TCCGTATCTTGTTCGGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTAAGCCTCGTGGGCTCTaGAGCACTCGTGGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: WPQSVARKMGPSSPQDPSKPRGL*STRGGV
Trigger: CACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTT...ACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGATCTGCAAGCCTCGTaGGCTCTGGAGCACTCGTGG +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALDLQAS*ALEHSW
Trigger: CCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATC...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCTGCCATGAGGGCCTGTCCCCACCCCAGAAGGAAACGAATGCCTTCAAGCCAAAAGCCTCTGTCCATGTaGAACGCCCCTTTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PAMRACPHPRRKRMPSSQKPLSM*NAPLLP
Trigger: AGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTT...TTGGCTTGAAGGCATTCGTTTCCTTCTGGGGTGGGGACAGGCCCTCATGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGGAAGGAAATCTACAATaGACACAGGCCCATGCGCTT +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVEGNLQ*TQAHAL
Trigger: AAGCGCATGGGCCTGTGTCCATTGTAGATTTCCTTC...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGTTACGGCTGCAGCCTaGAAACGAGGGCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALVTAAA*KRGQAL
Trigger: GAGAGCCTGCCCTCGTTTCCAGGCTGCAGCCGTAAC...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTCTGTCCTACAATTCTTaGGATGGGACCAGCACAATG +
Preference number: 4 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSLSYNS*DGTSTM
Trigger: CATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAG...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTCTGCGGCCTGGGTCCTaGATGGACTTTGTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: WPQSVARKMGPSSPQDPSLRPGS*MDFVSA
Trigger: GGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAG...ACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCTCCCTCTGCGGCCTaGGTCCTGGATGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGAPSAA*VLDGLC
Trigger: ACAAAGTCCATCCAGGACCCAGGCCGCAGAGGGAGC...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CAGGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGAGAAGGTGGGGGCCTaGATGCAGGAGTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: QDLPCSKVASICGKKDGAEKVGA*MQESGS
Trigger: GCTCCCAGACTCCTGCATCCAGGCCCCCACCTTCTC...GGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTGCTCACCGTATTTCTTaGAGTGGATGCGACAGTCGG +
Preference number: 4 (lower is better)
Translates to: SGALVAECVSVSARTVKGAHRIS*SGCDSR
Trigger: CCGACTGTCGCATCCACTTCAAGAAATACGGTGAGC...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CCTGCCATGAGGGCCTGTCCCCACCCCAGAAGGAAACGAATGCCTTCAAGCCAATGCTATGCTTCCCACTaGGCCCATCATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: PAMRACPHPRRKRMPSSQCYASH*AHHPLP
Trigger: AGGAAGAGGATGATGGGCTCAGTGGGAAGCATAGCA...TTGGCTTGAAGGCATTCGTTTCCTTCTGGGGTGGGGACAGGCCCTCATGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGCGAGTTGGGCCTGCTaGTCTCCTGCGTTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALASWAC*SPAFLS
Trigger: AGACAAAAACGCAGGAGATCAGCAGGCCCAACTCGC...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGACGCTGCGACTGTCTaGACTCTCTCCCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGDAATV*TLSLTF
Trigger: GAAGGTGAGGGAGAGAGTTCAGACAGTCGCAGCGTC...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp TGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTCATCTGCTGCTGGGCTaGCGAGTCCGAGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: WPQSVARKMGPSSPQDPSHLLLG*RVRVTL
Trigger: GAGAGTGACTCGGACTCGTCAGCCCAGCAGCAGATG...ACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTTTGGGACTGCAGCGCTaGCTGAGAGGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTLGLQR*LRGWQL
Trigger: CAGCTGCCAGCCTCTCAGTCAGCGCTGCAGTCCCAA...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCATTGGGACTGCAGCGCTaGCTGAGAGGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPLGLQR*LRGWQL
Trigger: CAGCTGCCAGCCTCTCAGTCAGCGCTGCAGTCCCAA...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACACGCTATGCTGCCTCCTaGAGCCGCCGCACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTRYAAS*SRRTRA
Trigger: TGCTCTGGTGCGGCGGCTTCAGGAGGCAGCATAGCG...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCGCGACCTTCATGCGCTaGGCTGGACGCCTTAGCCGC +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTATFMR*AGRLSR
Trigger: GCGGCTAAGGCGTCCAGCTCAGCGCATGAAGGTCGC...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGCTGGAGAACAGAAAGTaGACATTCACCTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVLENRK*TFTSCT
Trigger: AGTGCAGGAGGTGAATGTTCACTTTCTGTTCTCCAG...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGTCCCGGCCTCCGTGGTaGCAATCTTTGGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGSRPPW*QSLEVV
Trigger: CACCACCTCCAAAGATTGGCACCACGGAGGCCGGGA...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGGGATGCGACAGTCGGTaGAAAGCAGGATGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSGCDSR*KAGCSP
Trigger: GGGAGAACATCCTGCTTTGCACCGACTGTCGCATCC...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGGATGCGACAGTCGGTaGAAAGCAGGATGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALGCDSR*KAGCSP
Trigger: GGGAGAACATCCTGCTTTGCACCGACTGTCGCATCC...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CAGGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCTCAGGGCTGGCTGGCTaGTTCTTCCGACCACTGCGT +
Preference number: 4 (lower is better)
Translates to: QDLPCSKVASICGKKDGASGLAG*FFRPLR
Trigger: ACGCAGTGGTCGGAAGAAGCAGCCAGCCAGCCCTGA...GGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGACCCAGTCAGAGGCTaGAGCGGGGGATGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTDPVRG*SGGCGE
Trigger: CTCGCCACATCCCCCGCTGCAGCCTCTGACTGGGTC...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGGTGTGAGGGTACGCTaGTGCTGGGGAGGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTGVRVR*CWGGPQ
Trigger: CTGGGGACCTCCCCAGCAGCAGCGTACCCTCACACC...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACCCATGCAGCCACTGCTaGTCCATGGCCAGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHPCSHC*SMASLC
Trigger: GCAGAGACTGGCCATGGAGCAGCAGTGGCTGCATGG...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACGGTAGGTGGCCACCATaGATGTGGGGGTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNGRWPP*MWGCPC
Trigger: GCATGGACACCCCCACATGCATGGTGGCCACCTACC...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TCTGTCCTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGCCTATGCCCCCGATCTaGAAGCCTCGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SVLQFLGWDQHNGRRDLQPMPPI*KPRGLW
Trigger: CCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGG...CTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGACCTATGCCCCCGATCTaGAAGCCTCGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: MFSPVQDSLSFWGTVMQGPMPPI*KPRGLW
Trigger: CCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGG...TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCACCTATGCCCCCGATCTaGAAGCCTCGTGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPPMPPI*KPRGLW
Trigger: CCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGG...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGAATGTGGGGTCACCATaGAGACCTGCCCCTAGGGTA +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSNVGSP*RPAPRV
Trigger: TACCCTAGGGGCAGGTCTGCATGGTGACCCCACATT...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp TCTGTCCTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTCTTCCTGCTCCCTCTaGGGCCTGGGTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: SVLQFLGWDQHNGRRDLQSSCSL*GLGPGW
Trigger: CCATCCAGGACCCAGGCCGCAGAGGGAGCAGGAAGA...CTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp AGAAGGCAGCCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTCTTCCTGCTCCCTCTaGGGCCTGGGTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: RRQPSNTSLWQAYVLGHLSSCSL*GLGPGW
Trigger: CCATCCAGGACCCAGGCCGCAGAGGGAGCAGGAAGA...CAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGGCTGCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTCCACGGGAACAAGCCTaGCATGAGGGCCTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTPREQA*HEGLSP
Trigger: TGGGGACAGGCCCTCATGGCAGGCTTGTTCCCGTGG...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCATCCGAGTGTGCACGCTaGCTCTGCCGCAGTGGAGTG +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPSECAR*LCRSGV
Trigger: CACTCCACTGCGGCAGAGGCAGCGTGCACACTCGGA...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGCAAAATGGAGGCACATaGAGTCTCAGAGACCTCATA +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVQNGGT*SLRDLI
Trigger: TATGAGGTCTCTGAGACTGCATGTGCCTCCATTTTG...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377464.5
CDS-3UTR GCA 90 bp ACTGACCGTGCATCTACACTTGGGCCAGCACATTGCAGATGCTCAACAGCCACACTCCCGCCTACCCCATaGAGGATGGCTATCCCCATG +
Preference number: 4 (lower is better)
Translates to: TDRASTLGPAHCRCSTATLPPTP*RMAIPM
Trigger: CATGGGGATAGCCATCCTGCATGGGGTAGGCGGGAG...TGTGGCTGTTGAGCATCTGCAATGTGCTGGCCCAAGTGTAGATGCACGGTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CCA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGCGAAGTCATCTTCACTaGCTGAACTTAGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: YAPDLQASWALEHSWRSVRSHLH*LNLGPR
Trigger: TCTTGGACCTAAGTTCAGCCAGTGAAGATGACTTCG...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAACCATCAGGGCTGGCTaGCTGCTTCTTCCGACCACT +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGTIRAG*LLLPTT
Trigger: AGTGGTCGGAAGAAGCAGCCAGCCAGCCCTGATGGT...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGTGCGACCATCAGGGCTaGCTGGCTGCTTCTTCCGAC +
Preference number: 4 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLCDHQG*LAASSD
Trigger: GTCGGAAGAAGCAGCCAGCCAGCCCTGATGGTCGCA...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATAGGTACTGGCAGCGCTaGGGGAGTTCCGGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYRYWQR*GSSGRW
Trigger: CCAGCGGCCGGAACTCCCCCAGCGCTGCCAGTACCT...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGCATTGCTGGAGGTACTaGCAGCGCTGGGGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGHCWRY*QRWGSS
Trigger: GGAACTCCCCCAGCGCTGCCAGTACCTCCAGCAATG...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTCACTCTCATTGTCCTaGGGGCTGGGGATGCTCGGG +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLSLSLS*GLGMLG
Trigger: CCCGAGCATCCCCAGCCCCCAGGACAATGAGAGTGA...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGTGCAGCATCTGCTGCTaGGCTGACGAGTCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALCSICC*ADESES
Trigger: TGACTCGGACTCGTCAGCCCAGCAGCAGATGCTGCA...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACATGCAAGGCTGGGGGCTaGGCCTGCAGCATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTCKAGG*ACSICC
Trigger: GCAGCAGATGCTGCAGGCCCAGCCCCCAGCCTTGCA...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCGCGTGGGCCCTGGCGTaGGCAGCTGAGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCAWALA*AAEGSL
Trigger: CAGGGACCCCTCAGCTGCCCACGCCAGGGCCCACGC...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCCGTGGGGGAGCCCTGTaGGGGAACTGCAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTRGGAL*GNCSGR
Trigger: TCTGCCACTGCAGTTCCCCCACAGGGCTCCCCCACG...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGACAATGCGCTGTTGGATGTGGGTGTaGGGAACAGGCGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: LWQERWGRPHHKIQVTMRCWMWV*GTGAVG
Trigger: TCCCACAGCGCCTGTTCCCCACACCCACATCCAACA...GCGCATTGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCGGTGCCTGTTGGATGTaGGTGTGGGGAACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLGACWM*VWGTGA
Trigger: AGCGCCTGTTCCCCACACCCACATCCAACAGGCACC...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGAGGGTGCAGAAGGCTaGCCCGCCGACCCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTEGAEG*PADPVR
Trigger: TCTGACTGGGTCGGCGGGCCAGCCTTCTGCACCCTC...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTGAGGGTGCAGAAGGCTaGCCCGCCGACCCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSEGAEG*PADPVR
Trigger: TCTGACTGGGTCGGCGGGCCAGCCTTCTGCACCCTC...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTGTGGCGCCGGCAGCTaGGGGATGGGAGTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYCGAGS*GMGVVG
Trigger: GCCTACCACTCCCATCCCCCAGCTGCCGGCGCCACA...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGGCAGGTTGGCATTCATaGAGAAGGGTGAGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGAGWHS*RRVRAP
Trigger: CGGGGCCCTCACCCTTCTCCATGAATGCCAACCTGC...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCAGGGCGAGGAGGGCAATaGCTGGCTCTGAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPGRGGQ*LALRHE
Trigger: CTCATGCCTCAGAGCCAGCCATTGCCCTCCTCGCCC...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTACTGGCTGGCGTGACTaGGGGTGTCCACCACAGTGG +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTTGWRD*GCPPQW
Trigger: CCACTGTGGTGGACACCCCCAGTCACGCCAGCCAGT...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGCCTCCTCCCTCTTCTTaGCCAGCTTGGACCCGGCCA +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLPPPSS*PAWTRP
Trigger: TGGCCGGGTCCAAGCTGGCCAAGAAGAGGGAGGAGG...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCTCAGCCTCGCGCTTaGCCTTCTCAATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLAQPRA*PSQWPP
Trigger: AGGAGGCCATTGAGAAGGCCAAGCGCGAGGCTGAGC...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGATGGTGGCTCGAAGGATaGCCGCATGTGGCCAGGACC +
Preference number: 4 (lower is better)
Translates to: MFSPVQDSLSFWGTVMQGWWLEG*PHVART
Trigger: GGTCCTGGCCACATGCGGCCATCCTTCGAGCCACCA...TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCAATGGTGGTTGGTGGTaGCTCGAAGGATGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALNGGWW*LEGWPH
Trigger: ATGCGGCCATCCTTCGAGCCACCACCAACCACCATT...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CAGGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGGGGCACAGCAGCAATaGTGGTTGGTGGTGGCTCGA +
Preference number: 4 (lower is better)
Translates to: QDLPCSKVASICGKKDGAGAQQQ*WLVVAR
Trigger: TCGAGCCACCACCAACCACCATTGCTGCTGTGCCCC...GGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AGAAGGCAGCCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGGCTCCCGCTCGCGGATaGTGGGGTCGACGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RRQPSNTSLWQAYVLGHLAPARG*WGRRCR
Trigger: TCTACAACGTCGACCCCACCATCCGCGAGCGGGAGC...CAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGGCTGCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCAGTGCTCCATGGGGTTaGCGGCTGGGTGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTSAPWG*RLGAGG
Trigger: ACCCCCTGCACCCAGCCGCCAACCCCATGGAGCACT...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCATCTCGTGCTCGTGTaGGGGCTGTCCAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNHLVLV*GLSKQR
Trigger: CCTCTGCTTGGACAGCCCCCACACGAGCACGAGATG...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGTGCCGAAAACTGGGTaGCGAAGCATCTCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALVPKTG*RSISCS
Trigger: CGAGCACGAGATGCTTCGCCACCCAGTTTTCGGCAC...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACTGGCCACCATGCATGTaGGGGTGTCCATGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNWPPCM*GCPCSH
Trigger: GTGGCTGCATGGACACCCCCACATGCATGGTGGCCA...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGCTCTGGAGCACTCGTaGCGGAGTGTGTCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALALEHS*RSVSVC
Trigger: ACACACTGACACACTCCGCCACGAGTGCTCCAGAGC...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTAAGCCTCGTGGGCTCTaGAGCACTCGTGGCGGAGTG +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTKPRGL*STRGGV
Trigger: CACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTT...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCGATCTGCAAGCCTCGTaGGCTCTGGAGCACTCGTGG +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLDLQAS*ALEHSW
Trigger: CCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATC...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTCGTCCCTGCAAACCCTaGATGCTCGCTGCTGTGACC +
Preference number: 4 (lower is better)
Translates to: WPQSVARKMGPSSPQDPSRPCKP*MLAAVT
Trigger: GGTCACAGCAGCGAGCATCCAGGGTTTGCAGGGACG...ACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGGAAGGAAATCTACAATaGACACAGGCCCATGCGCTT +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVEGNLQ*TQAHAL
Trigger: AAGCGCATGGGCCTGTGTCCATTGTAGATTTCCTTC...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCTCTAACACATCCCTTTaGCAGGCATATGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTSNTSL*QAYVLG
Trigger: ACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGA...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGACACCCGCCCTCAGCCTaGGAGAAAGTGCGTTACGGC +
Preference number: 4 (lower is better)
Translates to: MFSPVQDSLSFWGTVMQGHPPSA*EKVRYG
Trigger: GCCGTAACGCACTTTCTCCCAGGCTGAGGGCGGGTG...TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGGAAGAGGCCACGTCCTaGCAGGAAGCAGGGCCGACA +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAEEEATS*QEAGPT
Trigger: TGTCGGCCCTGCTTCCTGCCAGGACGTGGCCTCTTC...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGGCTCCCTCTGCGGCCTaGGTCCTGGATGGACTTTGT +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGAPSAA*VLDGLC
Trigger: ACAAAGTCCATCCAGGACCCAGGCCGCAGAGGGAGC...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTGCCTTCAAGCCAATGTaGCCTGAAGTCCCACGACAA +
Preference number: 4 (lower is better)
Translates to: SGALVAECVSVSARTVKGAFKPM*PEVPRQ
Trigger: TTGTCGTGGGACTTCAGGCCACATTGGCTTGAAGGC...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CAA 72 bp GTCCGCCGACCCAGTGTGGTCTCTGTCCTACAATTCTaGGGATGGGACCAGCACAATGGCAGAAGAGACCTC +
Preference number: 4 (lower is better)
Translates to: VRRPSVVSVLQF*GWDQHNGRRDL
Trigger: GAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGAGACCACACTGGGTCGGCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGGGGGCTTCCCTGCCGTaGCCTTTCCTGCGACTTGAA +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAEGASLP*PFLRLE
Trigger: TTCAAGTCGCAGGAAAGGTCACGGCAGGGAAGCCCC...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR TCA 90 bp ACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCATGCAGACCTGCCCCTAGGGCTCCGGCGTGGCCTTaGATTCTCACTCTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: TQMVYQCNVGSPCRPAPRAPAWP*ILTLSC
Trigger: GCAAGAGAGAGTGAGAATTCAAGGCCACGCCGGAGC...CCTAGGGGCAGGTCTGCATGGTGACCCCACATTGCACTGGTAAACCATTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR TCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGCTATGCTTCCCACTaGGCCCATCATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSCYASH*AHHPLP
Trigger: AGGAAGAGGATGATGGGCTCAGTGGGAAGCATAGCA...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGACAATGCGCTGCTACCCTCATCGTTaGCGCTGCGACTGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: LWQERWGRPHHKIQVTMRCYPHR*RCDCLN
Trigger: GTTCAGACAGTCGCAGCGTCAACGATGAGGGTAGCA...GCGCATTGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACATTGGGACTGCAGCGCTaGCTGAGAGGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTLGLQR*LRGWQL
Trigger: CAGCTGCCAGCCTCTCAGTCAGCGCTGCAGTCCCAA...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCTTGGGACTGCAGCGCTaGCTGAGAGGCTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTLGLQR*LRGWQL
Trigger: CAGCTGCCAGCCTCTCAGTCAGCGCTGCAGTCCCAA...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp TCTGTCCTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGGGCAATGGCTGGCTCTaGGGCATGAGTTGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: SVLQFLGWDQHNGRRDLQGNGWL*GMSCRG
Trigger: ACCCCTGCAACTCATGCCTCAGAGCCAGCCATTGCC...CTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp ATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGGCAATGGCTGGCTCTaGGGCATGAGTTGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: MFSPVQDSLSFWGTVMQGGNGWL*GMSCRG
Trigger: ACCCCTGCAACTCATGCCTCAGAGCCAGCCATTGCC...TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGTTTGTAGAACCTAGCTaGCTGGCTGGCGTGACTGGG +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALFVEPS*LAGVTG
Trigger: CCCAGTCACGCCAGCCAGTCAGCTAGGTTCTACAAA...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGGTGCGGAGTCACGTTaGACATCTGCAGTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTGAESR*TSAVGP
Trigger: TGGCCCGACTGCAGATGTTCAACGTGACTCCGCACC...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp ATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGGTGCGGAGTCACGTTaGACATCTGCAGTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: MFSPVQDSLSFWGTVMQGGAESR*TSAVGP
Trigger: TGGCCCGACTGCAGATGTTCAACGTGACTCCGCACC...TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGGGAAATGTCGCTATTTaGCGCCAGAACCTGAATTTG +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVGNVAI*RQNLNL
Trigger: CAAATTCAGGTTCTGGCGTCAAATAGCGACATTTCC...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp CAGGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCTCTGCCGCAGTGGAGTaGAGCTCAACCTCGAGGACA +
Preference number: 4 (lower is better)
Translates to: QDLPCSKVASICGKKDGASAAVE*SSTSRT
Trigger: TGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGA...GGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp TGCAGATGCTCAACAGCCACAAGAGACCAGTGGTTACCACATTGGAAAGCACAGCCTTCCGTCAGCTCCTaGTACAGGAGGGGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: CRCSTATRDQWLPHWKAQPSVSS*YRRGSW
Trigger: CCAGGAGCCCCTCCTGTATCAGGAGCTGACGGAAGG...CTGTGCTTTCCAATGTGGTAACCACTGGTCTCTTGTGGCTGTTGAGCATCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR GCA 90 bp CCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGAACAAGATACGGACGCCATGCTCCTTGCTaGCCTCAAGTACATAAGGAG +
Preference number: 4 (lower is better)
Translates to: PLPQWSEAQPRGHRTRYGRHAPC*PQVHKE
Trigger: CTCCTTATGTACTTGAGGGCAGCAAGGAGCATGGCG...TCCGTATCTTGTTCGGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTTCTTCACCAGGCGCTaGAGGGCTTTGCCAGCATCG +
Preference number: 4 (lower is better)
Translates to: ISLAQKWPQSVARKMGPSFFTRR*RALPAS
Trigger: CGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAA...GGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACTTCTTCACCAGGCGCTaGAGGGCTTTGCCAGCATCG +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHFFTRR*RALPAS
Trigger: CGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAA...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTGGCTCGGGAGCTGGCTaGTTCGGGGGTCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSGSGAG*FGGLLP
Trigger: TGGAAGAAGACCCCCGAAGCAGCCAGCTCCCGAGCC...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGACGGCCTGCCTGCGGTaGCTACGATGGGCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKTACLR*LRWARE
Trigger: CTCCCGAGCCCATCGTAGGCACCGCAGGCAGGCCGT...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCCTCCTGAACACGGCCTaGCTGCGGTGCCTACGATGG +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTLLNTA*LRCLRW
Trigger: CCATCGTAGGCACCGCAGGCAGGCCGTGTTCAGGAG...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGTCCCGGCCTCCGTGGTaGCAATCTTTGGAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLSRPPW*QSLEVV
Trigger: CACCACCTCCAAAGATTGGCACCACGGAGGCCGGGA...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGCGTGTCCTCATGCTATaGTTCCCACTGAGCCCATCA +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSRVLML*FPLSPS
Trigger: TGATGGGCTCAGTGGGAAGCATAGCATGAGGACACG...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTTCAGGGCTGGCTGGCTaGTTCTTCCGACCACTGCGT +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTSGLAG*FFRPLR
Trigger: ACGCAGTGGTCGGAAGAAGCAGCCAGCCAGCCCTGA...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCATCAGGGCTGGCTGGCTaGTTCTTCCGACCACTGCGT +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPSGLAG*FFRPLR
Trigger: ACGCAGTGGTCGGAAGAAGCAGCCAGCCAGCCCTGA...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCGGGGTGCAAGGCCGGTaGCTGTTGGATGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTGVQGR*LLDVGV
Trigger: CACACCCACATCCAACAGGCACCGGCCTTGCACCCC...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATGTGAGGGTACGCTGCTaGTGGGGAGGTCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYVRVRC*WGGPQR
Trigger: CCTCTGGGGACCTCCCCAGCAGCAGCGTACCCTCAC...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp AGAAGGCAGCCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGATGGTGAGGGCGCTGTaGCGGGCAAAGTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: RRQPSNTSLWQAYVLGHLMVRAL*RAKCSM
Trigger: CATGGAGCACTTTGCCCGGCACAGCGCCCTCACCAT...CAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGGCTGCCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTATGGTGAGGGCGCTGTaGCGGGCAAAGTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTMVRAL*RAKCSM
Trigger: CATGGAGCACTTTGCCCGGCACAGCGCCCTCACCAT...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACTGGTCAGCGATGCCATaGGCTCTGCGTGGATACGCT +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNWSAMP*ALRGYA
Trigger: AGCGTATCCACGCAGAGCGCATGGCATCGCTGACCA...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGTCACGTTGAACATCTaGAGTCGGGCCAGGGGATCG +
Preference number: 4 (lower is better)
Translates to: WPQSVARKMGPSSPQDPSVTLNI*SRARGS
Trigger: CGATCCCCTGGCCCGACTGCAGATGTTCAACGTGAC...ACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTGGCGAAGCATCTCGTaGTCGTGTGGGGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAEWRSIS*SCGGCP
Trigger: TGGACAGCCCCCACACGAGCACGAGATGCTTCGCCA...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGTGGCGAAGCATCTCGTaGTCGTGTGGGGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLWRSIS*SCGGCP
Trigger: TGGACAGCCCCCACACGAGCACGAGATGCTTCGCCA...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACATGTGGGGGTGTCCATaGAGCCACTGCTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHMWGCP*SHCCSM
Trigger: CATGGAGCAGCAGTGGCTGCATGGACACCCCCACAT...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGGTAGGTGGCCACCATaGATGTGGGGGTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTGRWPP*MWGCPC
Trigger: GCATGGACACCCCCACATGCATGGTGGCCACCTACC...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTGTGCACGCTGCCTCTaGCGCAGTGGAGTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAECARCL*RSGVKL
Trigger: GAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACA...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGATACACACAGTCTCCTaGTCTGTAGACCACATCATC +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQIHTVS*SVDHII
Trigger: GATGATGTGGTCTACAGACCAGGAGACTGTGTGTAT...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp TGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGGTCCAAGAATTCACTaGACGGGGGTCTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: WPQSVARKMGPSSPQDPSGPRIH*TGVWRV
Trigger: CACCCTCCAGACCCCCGTCCAGTGAATTCTTGGACC...ACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCATGCAGACCTGCCCCTAGGTTCTCCCGGCCTCCGTaGTGCCAATCTTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TQMVYQCNVGSPCRPAPRFSRPP*CQSLEV
Trigger: CACCTCCAAAGATTGGCACCACGGAGGCCGGGAGAA...CCTAGGGGCAGGTCTGCATGGTGACCCCACATTGCACTGGTAAACCATTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CAGGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCCCACGGGCTTCTCAATaGGCGGGAGCTCACCGTATT +
Preference number: 4 (lower is better)
Translates to: QDLPCSKVASICGKKDGAPRASQ*AGAHRI
Trigger: AATACGGTGAGCTCCCGCCCATTGAGAAGCCCGTGG...GGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGCCACGGGCTTCTCAATaGGCGGGAGCTCACCGTATT +
Preference number: 4 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLPRASQ*AGAHRI
Trigger: AATACGGTGAGCTCCCGCCCATTGAGAAGCCCGTGG...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCTGTCCTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGCGACCATCAGGGCTaGCTGGCTGCTTCTTCCGAC +
Preference number: 4 (lower is better)
Translates to: SVLQFLGWDQHNGRRDLQCDHQG*LAASSD
Trigger: GTCGGAAGAAGCAGCCAGCCAGCCCTGATGGTCGCA...CTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTTGCGACCATCAGGGCTaGCTGGCTGCTTCTTCCGAC +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTCDHQG*LAASSD
Trigger: GTCGGAAGAAGCAGCCAGCCAGCCCTGATGGTCGCA...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCACATTGCTGGAGGTACTaGCAGCGCTGGGGGAGTTCC +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPHCWRY*QRWGSS
Trigger: GGAACTCCCCCAGCGCTGCCAGTACCTCCAGCAATG...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTCCTCCTTCACCTTCTTaGCCGACTTCTTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: SGALVAECVSVSARTVKGPPSPS*PTSSLS
Trigger: AGACAGTGAAGAAGTCGGCCAAGAAGGTGAAGGAGG...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCATCACTCTCATTGTCCTaGGGGCTGGGGATGCTCGGG +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPSLSLS*GLGMLG
Trigger: CCCGAGCATCCCCAGCCCCCAGGACAATGAGAGTGA...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACTGCAGCATCTGCTGCTaGGCTGACGAGTCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHCSICC*ADESES
Trigger: TGACTCGGACTCGTCAGCCCAGCAGCAGATGCTGCA...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGTGTTGGATGTGGGTGTaGGGAACAGGCGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLCWMWV*GTGAVG
Trigger: TCCCACAGCGCCTGTTCCCCACACCCACATCCAACA...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGGGTGCCTGTTGGATGTaGGTGTGGGGAACAGGCGCT +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAEGACWM*VWGTGA
Trigger: AGCGCCTGTTCCCCACACCCACATCCAACAGGCACC...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAAGGCCGGTGCCTGTTaGATGTGGGTGTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGKAGAC*MWVWGT
Trigger: TGTTCCCCACACCCACATCCAACAGGCACCGGCCTT...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGGAGGGGGAGGCAGGTTaGCATTCATGGAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGEGEAG*HSWRRV
Trigger: CACCCTTCTCCATGAATGCCAACCTGCCTCCCCCTC...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCATGCAGACCTGCCCCTAGGGAGGGGGAGGCAGGTTaGCATTCATGGAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: TQMVYQCNVGSPCRPAPREGEAG*HSWRRV
Trigger: CACCCTTCTCCATGAATGCCAACCTGCCTCCCCCTC...CCTAGGGGCAGGTCTGCATGGTGACCCCACATTGCACTGGTAAACCATTTGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCGGGCGAGGAGGGCAATaGCTGGCTCTGAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTGRGGQ*LALRHE
Trigger: CTCATGCCTCAGAGCCAGCCATTGCCCTCCTCGCCC...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATCGCACCAGAGCAGGGTaGCTGGGCCGAGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNRTRAG*LGRGAR
Trigger: CCTGGCACCTCGGCCCAGCCACCCTGCTCTGGTGCG...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGGCTCAGCCTCGCGCTTaGCCTTCTCAATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAEAQPRA*PSQWPP
Trigger: AGGAGGCCATTGAGAAGGCCAAGCGCGAGGCTGAGC...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCATGCAGACCTGCCCCTAGGAGGACCACTGAGCTGTaGGTCACTGAGGCGACCTTC +
Preference number: 4 (lower is better)
Translates to: TQMVYQCNVGSPCRPAPRRTTEL*VTEATF
Trigger: GAAGGTCGCCTCAGTGACCCACAGCTCAGTGGTCCT...CCTAGGGGCAGGTCTGCATGGTGACCCCACATTGCACTGGTAAACCATTTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACAAGGATGGCCGCATGTaGCCAGGACCACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNKDGRM*PGPLSC
Trigger: ACAGCTCAGTGGTCCTGGCCACATGCGGCCATCCTT...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACATGGTGGCTCGAAGGATaGCCGCATGTGGCCAGGACC +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTWWLEG*PHVART
Trigger: GGTCCTGGCCACATGCGGCCATCCTTCGAGCCACCA...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACGCACAGCAGCAATGGTaGTTGGTGGTGGCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHAQQQW*LVVARR
Trigger: CCTTCGAGCCACCACCAACCACCATTGCTGCTGTGC...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCGGGCAAAGTGCTCCATaGGGTTGGCGGCTGGGTGCA +
Preference number: 4 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVGQSAP*GWRLGA
Trigger: TGCACCCAGCCGCCAACCCCATGGAGCACTTTGCCC...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCGGGTTCAGGCCCGGGTaGAAAGAAGCAAAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLGFRPG*KEAKGW
Trigger: CCACCCTTTTGCTTCTTTCCACCCGGGCCTGAACCC...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGCCATGCGCTCTGCGTaGATACGCTCGGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTAMRSA*IRSAAS
Trigger: ACTGGCAGCCGAGCGTATCCACGCAGAGCGCATGGC...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGATGGCCACCATGCATGTaGGGGTGTCCATGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: MFSPVQDSLSFWGTVMQGWPPCM*GCPCSH
Trigger: GTGGCTGCATGGACACCCCCACATGCATGGTGGCCA...TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCTGCCATGAGGGCCTGTCCCCACCCCAGAAGGAAACGAATGCCTTCAAGCCAAGACTCACTAAGTTTCTaGGGGACTGTCATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: PAMRACPHPRRKRMPSSQDSLSF*GTVMQG
Trigger: TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTC...TTGGCTTGAAGGCATTCGTTTCCTTCTGGGGTGGGGACAGGCCCTCATGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTGGCCTGGGTCCTGGATaGACTTTGTGTCCGCCGACC +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSGLGPG*TLCPPT
Trigger: GGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCC...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCCTGCGGCCTGGGTCCTaGATGGACTTTGTGTCCGCC +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTLRPGS*MDFVSA
Trigger: GGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAG...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGCTGCCTCTGCCGCAGTaGAGTGAAGCTCAACCTCGA +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGLPLPQ*SEAQPR
Trigger: TCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAG...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGCTGCCTCTGCCGCAGTaGAGTGAAGCTCAACCTCGA +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGLPLPQ*SEAQPR
Trigger: TCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAG...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp ATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGACGCTGCGACTGTCTaGACTCTCTCCCTCACCTTC +
Preference number: 4 (lower is better)
Translates to: MFSPVQDSLSFWGTVMQGDAATV*TLSLTF
Trigger: GAAGGTGAGGGAGAGAGTTCAGACAGTCGCAGCGTC...TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACTGCTACCCTCATCGTTaGCGCTGCGACTGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNCYPHR*RCDCLN
Trigger: GTTCAGACAGTCGCAGCGTCAACGATGAGGGTAGCA...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CCTGGCCTCCTGAGAAGCAGCCCCCACACAGCATGCTTTCTGAATGCACTGTGGCTGGAGAACAGAAAGTaGACATTCACCTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: PGLLRSSPHTACFLNALWLENRK*TFTSCT
Trigger: AGTGCAGGAGGTGAATGTTCACTTTCTGTTCTCCAG...CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCTGCTTCTCAGGAGGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGACAATGCGCTGCCGCCATGCTCCTTaGTGCCCTCAAGTACATAAG +
Preference number: 4 (lower is better)
Translates to: LWQERWGRPHHKIQVTMRCRHAP*CPQVHK
Trigger: CTTATGTACTTGAGGGCAGCAAGGAGCATGGCGGCA...GCGCATTGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGAACAAGATACGGATCCATCACACATTCCTaGAAATGCCGCCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: PLPQWSEAQPRGHRTRYGSITHS*KCRHAP
Trigger: AGGAGCATGGCGGCATTTGCAGGAATGTGTGATGGA...TCCGTATCTTGTTCGGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCTCCATCACACATTCCTaGAAATGCCGCCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALSITHS*KCRHAP
Trigger: AGGAGCATGGCGGCATTTGCAGGAATGTGTGATGGA...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATACGGCCTGCCTGCGGTaGCTACGATGGGCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNTACLR*LRWARE
Trigger: CTCCCGAGCCCATCGTAGGCACCGCAGGCAGGCCGT...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACTACCCCTTCAGCTCCTaGTCACTGTCCTCACTGTCG +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHYPFSS*SLSSLS
Trigger: CGACAGTGAGGACAGTGAGCAGGAGCTGAAGGGGTA...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGTACCCCTTCAGCTCCTaGTCACTGTCCTCACTGTCG +
Preference number: 4 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLYPFSS*SLSSLS
Trigger: CGACAGTGAGGACAGTGAGCAGGAGCTGAAGGGGTA...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGGGATGCGACAGTCGGTaGAAAGCAGGATGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGGCDSR*KAGCSP
Trigger: GGGAGAACATCCTGCTTTGCACCGACTGTCGCATCC...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCTTCTTCCGACCACTaGGTAGTGTCGACATCGAGC +
Preference number: 4 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLASSDH*VVSTSS
Trigger: GCTCGATGTCGACACTACGCAGTGGTCGGAAGAAGC...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCGCTTCTTCCGACCACTaGGTAGTGTCGACATCGAGC +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLASSDH*VVSTSS
Trigger: GCTCGATGTCGACACTACGCAGTGGTCGGAAGAAGC...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATGCCTGCAGCATCTGCTaGTGGGCTGACGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYACSIC*WADESE
Trigger: CTCGGACTCGTCAGCCCAGCAGCAGATGCTGCAGGC...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATCTGGGCATGAGAGGGTaGAGAAGGCTGGCCCGCCGA +
Preference number: 4 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYLGMRG*RRLARR
Trigger: TCGGCGGGCCAGCCTTCTGCACCCTCTCATGCCCAG...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGCTGGGCATGAGAGGGTaGAGAAGGCTGGCCCGCCGA +
Preference number: 4 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKLGMRG*RRLARR
Trigger: TCGGCGGGCCAGCCTTCTGCACCCTCTCATGCCCAG...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATCTGTGCCGGGCAAAGTaGTCCATGGGGTTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYLCRAK*SMGLAA
Trigger: AGCCGCCAACCCCATGGAGCACTTTGCCCGGCACAG...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTTGGTCAGCGATGCCATaGGCTCTGCGTGGATACGCT +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTWSAMP*ALRGYA
Trigger: AGCGTATCCACGCAGAGCGCATGGCATCGCTGACCA...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGATCGCTGGTCAGCGATaGCATGCGCTCTGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAEIAGQR*HALCVD
Trigger: ATCCACGCAGAGCGCATGGCATCGCTGACCAGCGAT...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCAGTCACGTTGAACATCTaGAGTCGGGCCAGGGGATCG +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPVTLNI*SRARGS
Trigger: CGATCCCCTGGCCCGACTGCAGATGTTCAACGTGAC...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCGGTAGGTGGCCACCATaGATGTGGGGGTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTGRWPP*MWGCPC
Trigger: GCATGGACACCCCCACATGCATGGTGGCCACCTACC...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCATGGACACAGGCCCATaGGCTTTCCATCCCGTGGAA +
Preference number: 4 (lower is better)
Translates to: ISLAQKWPQSVARKMGPSMDTGP*AFHPVE
Trigger: TTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCAT...GGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCATGCAGACCTGCCCCTAGGAAAGTGCGTTACGGCTaGAGCCTGGAAACGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TQMVYQCNVGSPCRPAPRKVRYG*SLETRA
Trigger: TGCCCTCGTTTCCAGGCTGCAGCCGTAACGCACTTT...CCTAGGGGCAGGTCTGCATGGTGACCCCACATTGCACTGGTAAACCATTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCCAGCCTGGGAGAAAGTaGGTTACGGCTGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVQPGRK*VTAAAW
Trigger: CCAGGCTGCAGCCGTAACGCACTTTCTCCCAGGCTG...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCCCAGGATCATGTCTaGTTTTGTTTTCCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGAQDHV*FCFPRA
Trigger: CGCCCTCGGAAAACAAAACCAGACATGATCCTGGGC...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR CCA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGCTGATACACAGAATCTaGAACCTCAGATTGACGGTA +
Preference number: 4 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQLIHRI*NLRLTV
Trigger: TACCGTCAATCTGAGGTTCCAGATTCTGTGTATCAG...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGGTCCAAGAATTCACTaGACGGGGGTCTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTGPRIH*TGVWRV
Trigger: CACCCTCCAGACCCCCGTCCAGTGAATTCTTGGACC...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGCCACGGGCTTCTCAATaGGCGGGAGCTCACCGTATT +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLPRASQ*AGAHRI
Trigger: AATACGGTGAGCTCCCGCCCATTGAGAAGCCCGTGG...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGACCACGGGCTTCTCAATaGGCGGGAGCTCACCGTATT +
Preference number: 4 (lower is better)
Translates to: MFSPVQDSLSFWGTVMQGPRASQ*AGAHRI
Trigger: AATACGGTGAGCTCCCGCCCATTGAGAAGCCCGTGG...TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGGCCACCTTCTCCCGCTaGCGTTTGTTACTCTTAAGA +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSATFSR*RLLLLR
Trigger: TCTTAAGAGTAACAAACGCCAGCGGGAGAAGGTGGC...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCATGCAGACCTGCCCCTAGGTCCCTCACCTTCAGATaGCGAGTTGGGCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: TQMVYQCNVGSPCRPAPRSLTFR*RVGPAD
Trigger: ATCAGCAGGCCCAACTCGCCATCTGAAGGTGAGGGA...CCTAGGGGCAGGTCTGCATGGTGACCCCACATTGCACTGGTAAACCATTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACTCCCTCACCTTCAGATaGCGAGTTGGGCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNSLTFR*RVGPAD
Trigger: ATCAGCAGGCCCAACTCGCCATCTGAAGGTGAGGGA...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGTGCTGCGATTGTCCTaGTCGATGTCTTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGVLRLS*SMSLGS
Trigger: TGACCCCAAAGACATCGACCAGGACAATCGCAGCAC...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCAAAGGCCGGTGCCTGTTaGATGTGGGTGTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPKAGAC*MWVWGT
Trigger: TGTTCCCCACACCCACATCCAACAGGCACCGGCCTT...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCGTGCTTGTGGGCCTGTaGCGCCGGCAGCTGGGGGAT +
Preference number: 4 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCVLVGL*RRQLGD
Trigger: ATCCCCCAGCTGCCGGCGCCACAGGCCCACAAGCAC...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCATGCAGACCTGCCCCTAGGGCTTGGCCTTCTCAATaGCCTCCTCCCTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TQMVYQCNVGSPCRPAPRAWPSQ*PPPSSW
Trigger: CCAAGAAGAGGGAGGAGGCCATTGAGAAGGCCAAGC...CCTAGGGGCAGGTCTGCATGGTGACCCCACATTGCACTGGTAAACCATTTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCGCTCAGCCTCGCGCTTaGCCTTCTCAATGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTAQPRA*PSQWPP
Trigger: AGGAGGCCATTGAGAAGGCCAAGCGCGAGGCTGAGC...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGAAGGATGGCCGCATGTaGCCAGGACCACTGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAEKDGRM*PGPLSC
Trigger: ACAGCTCAGTGGTCCTGGCCACATGCGGCCATCCTT...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGAATGGTGGTTGGTGGTaGCTCGAAGGATGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGNGGWW*LEGWPH
Trigger: ATGCGGCCATCCTTCGAGCCACCACCAACCACCATT...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGAGCAATGGTGGTTGGTaGTGGCTCGAAGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAESNGGW*WLEGWP
Trigger: CGGCCATCCTTCGAGCCACCACCAACCACCATTGCT...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCAGCACAGCAGCAATGGTaGTTGGTGGTGGCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPAQQQW*LVVARR
Trigger: CCTTCGAGCCACCACCAACCACCATTGCTGCTGTGC...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATCCCGCTCGCGGATGGTaGGGTCGACGTTGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYPARGW*GRRCRG
Trigger: GCCTCTACAACGTCGACCCCACCATCCGCGAGCGGG...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGGTGCCGAAAACTGGGTaGCGAAGCATCTCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAEVPKTG*RSISCS
Trigger: CGAGCACGAGATGCTTCGCCACCCAGTTTTCGGCAC...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGGGGGTGCCGAAAACTaGGTGGCGAAGCATCTCGTG +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTGGAEN*VAKHLV
Trigger: CACGAGATGCTTCGCCACCCAGTTTTCGGCACCCCC...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGATCTGCAAGCCTCGTaGGCTCTGGAGCACTCGTGG +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTDLQAS*ALEHSW
Trigger: CCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATC...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACAAGCCTCTGTCCATGTaGAACGCCCCTTTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHKPLSM*NAPLLP
Trigger: AGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTT...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGTTCCAGGATGAAGAGTaGGACTCAAATGGTTTACCA +
Preference number: 4 (lower is better)
Translates to: NSYAPDLQASWALEHSWRFQDEE*DSNGLP
Trigger: TGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATGGCCTGGGTCCTGGATaGACTTTGTGTCCGCCGACC +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYGLGPG*TLCPPT
Trigger: GGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCC...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCCAGAAGCCGAGAAGGTaGGGGCCTGGATGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVQKPRR*GPGCRS
Trigger: ACTCCTGCATCCAGGCCCCCACCTTCTCGGCTTCTG...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGCTCAGCGCTTCGCCTTaGGATATGGGGAGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALLSASP*DMGRKA
Trigger: TGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAG...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACCTTTGTCCGCTGTCATaGTTCGCCACGTGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHLCPLS*FATCLL
Trigger: AAGAAGGCACGTGGCGAATCATGACAGCGGACAAAG...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR TCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGTCCAGCACTTCTCGATaGGCTTGGGCACAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLSSTSR*AWAQAS
Trigger: AGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGA...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACGCTCACCGTATTTCTTaGAGTGGATGCGACAGTCGG +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNAHRIS*SGCDSR
Trigger: CCGACTGTCGCATCCACTTCAAGAAATACGGTGAGC...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACAGCGGATGTCTTCATTaGTGGGTGAGGTGCGACCAT +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNSGCLH*WVRCDH
Trigger: ATGGTCGCACCTCACCCATCAATGAAGACATCCGCT...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CAGGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCAGCGGATGTCTTCATTaGTGGGTGAGGTGCGACCAT +
Preference number: 4 (lower is better)
Translates to: QDLPCSKVASICGKKDGASGCLH*WVRCDH
Trigger: ATGGTCGCACCTCACCCATCAATGAAGACATCCGCT...GGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp TCTGTCCTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGGCGAGTTGGGCCTGCTaGTCTCCTGCGTTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: SVLQFLGWDQHNGRRDLQASWAC*SPAFLS
Trigger: AGACAAAAACGCAGGAGATCAGCAGGCCCAACTCGC...CTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATAGCTGCAGGGAGGTGTaGGGGTACGCTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNSCREV*GYAAAG
Trigger: CCCAGCAGCAGCGTACCCTCACACCTCCCTGCAGCT...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGACCCGGCCAGAGGCATaGAGTACAGGTCTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKTRPEA*STGLSG
Trigger: CCCGGACAGACCTGTACTTCATGCCTCTGGCCGGGT...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGAGGTTGGTGGGCGACATaGCGTGGGGCCGGGCGTACT +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRGWWAT*RGAGRT
Trigger: AGTACGCCCGGCCCCACGTCATGTCGCCCACCAACC...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGAAAATGGAAGAGGTCTaGTGGAGCAGATGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSKMEEV*WSRCLC
Trigger: GCACAGACATCTGCTCCATCAGACCTCTTCCATTTT...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGGAAACAGAACAGTaGCACTGGAGAACAGAAAGT +
Preference number: 4 (lower is better)
Translates to: SGALVAECVSVSARTVKGVETEQ*HWRTES
Trigger: ACTTTCTGTTCTCCAGTGTCACTGTTCTGTTTCCAC...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACACACAGCATGCTTTCTaGATGCACTGTGGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHTQHAF*MHCGWD
Trigger: GTCCCACCCACAGTGCATTCAGAAAGCATGCTGTGT...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGACCTCCAGTGTCTaGGAGAAAAGGATCGGAAGA +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALETSSV*EKRIGR
Trigger: TCTTCCGATCCTTTTCTCTCAGACACTGGAGGTCTC...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTGCCGTGACCTTTCCTaGGACTTGAACCTAGGCTCC +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAECRDLS*DLNLGS
Trigger: GGAGCCTAGGTTCAAGTCGCAGGAAAGGTCACGGCA...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR GCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCACACATTCCTGCAAATaGCGCCATGCTCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLTHSCK*RHAPCC
Trigger: GCAGCAAGGAGCATGGCGGCATTTGCAGGAATGTGT...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp ACTGACCGTGCATCTACACTTGGGCCAGCACATTGCAGATGCTCAACAGCCACAACACATTCCTGCAAATaGCGCCATGCTCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TDRASTLGPAHCRCSTATTHSCK*RHAPCC
Trigger: GCAGCAAGGAGCATGGCGGCATTTGCAGGAATGTGT...TGTGGCTGTTGAGCATCTGCAATGTGCTGGCCCAAGTGTAGATGCACGGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR GCA 90 bp CCTGGCCTCCTGAGAAGCAGCCCCCACACAGCATGCTTTCTGAATGCACTGTGGATGCAGTGTGTTCAGTaGATTCAGAGTGGTGTCATC +
Preference number: 4 (lower is better)
Translates to: PGLLRSSPHTACFLNALWMQCVQ*IQSGVI
Trigger: GATGACACCACTCTGAATGCACTGAACACACTGCAT...CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCTGCTTCTCAGGAGGCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGGCGCTGCAGGGCTTTaGCAGCATCGTAACCGCTTT +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTGAAGL*QHRNRF
Trigger: AAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCC...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTACCCCTTCAGCTCCTaGTCACTGTCCTCACTGTCG +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAEYPFSS*SLSSLS
Trigger: CGACAGTGAGGACAGTGAGCAGGAGCTGAAGGGGTA...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCGTGTCCTCATGCTATaGTTCCCACTGAGCCCATCA +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNRVLML*FPLSPS
Trigger: TGATGGGCTCAGTGGGAAGCATAGCATGAGGACACG...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGAGCCCTGTGGGGGAACTaGAGTGGCAGAGGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRALWGN*SGRGRG
Trigger: CCCACGCCCTCTGCCACTGCAGTTCCCCCACAGGGC...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTCTGAGGCGACCTTCATaGGCTGAGCTGGACGCCTTA +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSLRRPS*AELDAL
Trigger: TAAGGCGTCCAGCTCAGCGCATGAAGGTCGCCTCAG...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTGTGGATACGCTCGGCTaGCAGTCTGTCAGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSVDTLG*QSVRVA
Trigger: AGCTACCCTGACAGACTGGCAGCCGAGCGTATCCAC...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCTGGTCAGCGATGCCATaGGCTCTGCGTGGATACGCT +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTWSAMP*ALRGYA
Trigger: AGCGTATCCACGCAGAGCGCATGGCATCGCTGACCA...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCATCGCTGGTCAGCGATaGCATGCGCTCTGCGTGGAT +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTIAGQR*HALCVD
Trigger: ATCCACGCAGAGCGCATGGCATCGCTGACCAGCGAT...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCAGACGTAAAAAGCCATaGTGCAGAACTTTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTRRKKP*CRTFSN
Trigger: ATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCT...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGATGGACACAGGCCCATaGGCTTTCCATCCCGTGGAA +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLMDTGP*AFHPVE
Trigger: TTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCAT...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAATGGACACAGGCCCATaGGCTTTCCATCCCGTGGAA +
Preference number: 4 (lower is better)
Translates to: MFSPVQDSLSFWGTVMQGMDTGP*AFHPVE
Trigger: TTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCAT...TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGATGGACACAGGCCCATaGGCTTTCCATCCCGTGGAA +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAEMDTGP*AFHPVE
Trigger: TTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCAT...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTAATGTGGGGTCACCATaGAGACCTGCCCCTAGGGTA +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTNVGSP*RPAPRV
Trigger: TACCCTAGGGGCAGGTCTGCATGGTGACCCCACATT...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAAGCATGCTTTCTGAATaGACTGTGGGTGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGSMLSE*TVGGTP
Trigger: TGGAGTCCCACCCACAGTGCATTCAGAAAGCATGCT...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTATCAGCATCTCTTCCTaGTCCCTCTGCGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSISISS*SLCGLG
Trigger: ACCCAGGCCGCAGAGGGAGCAGGAAGAGATGCTGAT...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGACAATGCGCCCAGAAGGAAACGAATaGCTTCAAGCCAATGTGGCC +
Preference number: 4 (lower is better)
Translates to: LWQERWGRPHHKIQVTMRPEGNE*LQANVA
Trigger: GGCCACATTGGCTTGAAGGCATTCGTTTCCTTCTGG...GCGCATTGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGAGAGCGTCTCGGGGTGTaGGGGAGGCTGAGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRERLGV*GRLRRL
Trigger: GAGCCTCCTCAGCCTCCCGCACACCCCGAGACGCTC...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000400908.7
CDS-3UTR CCA 90 bp ACAGGCACTCTGGTCTCCCGCCTACCCCATGCAGGATGGCTATCCCCATGCAGACTGATACACAGAATCTaGAACCTCAGATTGACGGTA +
Preference number: 4 (lower is better)
Translates to: TGTLVSRLPHAGWLSPCRLIHRI*NLRLTV
Trigger: TACCGTCAATCTGAGGTTCCAGATTCTGTGTATCAG...TCTGCATGGGGATAGCCATCCTGCATGGGGTAGGCGGGAGACCAGAGTGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCGGTCCAAGAATTCACTaGACGGGGGTCTGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTGPRIH*TGVWRV
Trigger: CACCCTCCAGACCCCCGTCCAGTGAATTCTTGGACC...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACATTCTCCCGGCCTCCGTaGTGCCAATCTTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTFSRPP*CQSLEV
Trigger: CACCTCCAAAGATTGGCACCACGGAGGCCGGGAGAA...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCCCGTATTTCTTGAAGTaGATGCGACAGTCGGTGCAA +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALPYFLK*MRQSVQ
Trigger: TTGCACCGACTGTCGCATCCACTTCAAGAAATACGG...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGCCGTATTTCTTGAAGTaGATGCGACAGTCGGTGCAA +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSPYFLK*MRQSVQ
Trigger: TTGCACCGACTGTCGCATCCACTTCAAGAAATACGG...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCGTTTTTGTCTTCTTaGAGCTGGTCCTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGAFLSS*SWSCQP
Trigger: AGGCTGACAGGACCAGCTCCAAGAAGACAAAAACGC...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTTCCCTCACCTTCAGATaGCGAGTTGGGCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTSLTFR*RVGPAD
Trigger: ATCAGCAGGCCCAACTCGCCATCTGAAGGTGAGGGA...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCTGCAGCATCTGCTGCTaGGCTGACGAGTCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTCSICC*ADESES
Trigger: TGACTCGGACTCGTCAGCCCAGCAGCAGATGCTGCA...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAAAGGCCGGTGCCTGTTaGATGTGGGTGTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTKAGAC*MWVWGT
Trigger: TGTTCCCCACACCCACATCCAACAGGCACCGGCCTT...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATGCAGGTTGGCATTCATaGAGAAGGGTGAGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYAGWHS*RRVRAP
Trigger: CGGGGCCCTCACCCTTCTCCATGAATGCCAACCTGC...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTAGCAATGGTGGTTGGTaGTGGCTCGAAGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSSNGGW*WLEGWP
Trigger: CGGCCATCCTTCGAGCCACCACCAACCACCATTGCT...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGAAGGCAGCCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGAGCAGCAATGGTGGTTaGTGGTGGCTCGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: RRQPSNTSLWQAYVLGHLSSNGG*WWLEGW
Trigger: CCATCCTTCGAGCCACCACCAACCACCATTGCTGCT...CAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGGCTGCCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTGCACAGCAGCAATGGTaGTTGGTGGTGGCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSAQQQW*LVVARR
Trigger: CCTTCGAGCCACCACCAACCACCATTGCTGCTGTGC...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGGGTTCAGGCCCGGGTaGAAAGAAGCAAAAGGGTGG +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTGFRPG*KEAKGW
Trigger: CCACCCTTTTGCTTCTTTCCACCCGGGCCTGAACCC...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATCATCTCGTGCTCGTGTaGGGGCTGTCCAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYHLVLV*GLSKQR
Trigger: CCTCTGCTTGGACAGCCCCCACACGAGCACGAGATG...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATGGGGGTGCCGAAAACTaGGTGGCGAAGCATCTCGTG +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYGGAEN*VAKHLV
Trigger: CACGAGATGCTTCGCCACCCAGTTTTCGGCACCCCC...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGACTCACTAAGTTTCTaGGGGACTGTCATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALDSLSF*GTVMQG
Trigger: TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTC...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGCTCTGGAGCACTCGTaGCGGAGTGTGTCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTALEHS*RSVSVC
Trigger: ACACACTGACACACTCCGCCACGAGTGCTCCAGAGC...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGAGTGGCCTCAATCTGTaGCAAGAAAGATGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGSGLNL*QERWGR
Trigger: ACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACT...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCTGGCCTCCTGAGAAGCAGCCCCCACACAGCATGCTTTCTGAATGCACTGTGGAGAGTGGGACTCAAATaGTTTACCAGTGCAATGTGG +
Preference number: 4 (lower is better)
Translates to: PGLLRSSPHTACFLNALWRVGLK*FTSAMW
Trigger: CCACATTGCACTGGTAAACCATTTGAGTCCCACTCT...CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCTGCTTCTCAGGAGGCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGTTTCTGAATGCACTGTaGGTGGGACTCCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALFLNAL*VGLQFP
Trigger: TGGGAACTGGAGTCCCACCCACAGTGCATTCAGAAA...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGTCCGCCGACCCAGTGTaGTCTCTGTCCTACAATTCT +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGSADPV*SLSYNS
Trigger: AGAATTGTAGGACAGAGACCACACTGGGTCGGCGGA...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGCCTGGGTCCTGGATaGACTTTGTGTCCGCCGACC +
Preference number: 4 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYGLGPG*TLCPPT
Trigger: GGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCC...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGCTCAGCGCTTCGCCTTaGGATATGGGGAGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGLSASP*DMGRKA
Trigger: TGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAG...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGCCGAAGGAAACCGAGTaGTTGGGCTTCAAAGACACC +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGPKETE*LGFKDT
Trigger: GGTGTCTTTGAAGCCCAACCACTCGGTTTCCTTCGG...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ACTGACCGTGCATCTACACTTGGGCCAGCACATTGCAGATGCTCAACAGCCACACTACCCCATGCAGGATaGCTATCCCCATGCAGAATG +
Preference number: 4 (lower is better)
Translates to: TDRASTLGPAHCRCSTATLPHAG*LSPCRM
Trigger: CATTCTGCATGGGGATAGCCATCCTGCATGGGGTAG...TGTGGCTGTTGAGCATCTGCAATGTGCTGGCCCAAGTGTAGATGCACGGTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR TCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGGGCTTCCCTGCCGTaGCCTTTCCTGCGACTTGAA +
Preference number: 4 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYGASLP*PFLRLE
Trigger: TTCAAGTCGCAGGAAAGGTCACGGCAGGGAAGCCCC...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR TCA 90 bp AGTGGTATGATCACAGTTCACTGTAACGTGGAGCTTCCGGGCTCAAATGATCCTGCTCCGGCGTGGCCTTaGATTCTCACTCTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SGMITVHCNVELPGSNDPAPAWP*ILTLSC
Trigger: GCAAGAGAGAGTGAGAATTCAAGGCCACGCCGGAGC...AGGATCATTTGAGCCCGGAAGCTCCACGTTACAGTGAACTGTGATCATACCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR TCA 90 bp TCTGTCCTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGGCTCACCGTATTTCTTaGAGTGGATGCGACAGTCGG +
Preference number: 4 (lower is better)
Translates to: SVLQFLGWDQHNGRRDLQAHRIS*SGCDSR
Trigger: CCGACTGTCGCATCCACTTCAAGAAATACGGTGAGC...CTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTGTCTTCATTGATGGGTaGGGTGCGACCATCAGGGCT +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSVFIDG*GATIRA
Trigger: AGCCCTGATGGTCGCACCTCACCCATCAATGAAGAC...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACATTTGTAGAACCTAGCTaGCTGGCTGGCGTGACTGGG +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTFVEPS*LAGVTG
Trigger: CCCAGTCACGCCAGCCAGTCAGCTAGGTTCTACAAA...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCTTTGTAGAACCTAGCTaGCTGGCTGGCGTGACTGGG +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTFVEPS*LAGVTG
Trigger: CCCAGTCACGCCAGCCAGTCAGCTAGGTTCTACAAA...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGGATTCTAGCACCTACTaGGAAATCAAGGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: VGSGALVAECVSVSARTVDSSTY*EIKEKK
Trigger: TTTCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATC...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGGATTCTAGCACCTACTaGGAAATCAAGGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: NSYAPDLQASWALEHSWRDSSTY*EIKEKK
Trigger: TTTCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATC...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGAGGAGCAGACACAAGTaGAACGCCAGGCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGRSRHK*NARQKT
Trigger: TGTTTTCTGCCTGGCGTTTCACTTGTGTCTGCTCCT...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGAAAATGGAAGAGGTCTaGTGGAGCAGATGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALKMEEV*WSRCLC
Trigger: GCACAGACATCTGCTCCATCAGACCTCTTCCATTTT...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTCAAGCCAATGTGGCCTaGAGTCCCACGACAAAAGGT +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTQANVA*SPTTKG
Trigger: ACCTTTTGTCGTGGGACTTCAGGCCACATTGGCTTG...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp ACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCATGCAGACCTGCCCCTAGGGCTTCAAAGACACCATaGAGGTCAGGGCCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: TQMVYQCNVGSPCRPAPRASKTP*RSGPPK
Trigger: TTTAGGAGGCCCTGACCTTCATGGTGTCTTTGAAGC...CCTAGGGGCAGGTCTGCATGGTGACCCCACATTGCACTGGTAAACCATTTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp ATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCGCTTCAAAGACACCATaGAGGTCAGGGCCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: ISLAQKWPQSVARKMGPSASKTP*RSGPPK
Trigger: TTTAGGAGGCCCTGACCTTCATGGTGTCTTTGAAGC...GGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGTGCCGCCATGCTCCTTaGTGCCCTCAAGTACATAAG +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLCRHAP*CPQVHK
Trigger: CTTATGTACTTGAGGGCAGCAAGGAGCATGGCGGCA...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGATGCAGTGTGTTCAGTaGATTCAGAGTGGTGTCATC +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSMQCVQ*IQSGVI
Trigger: GATGACACCACTCTGAATGCACTGAACACACTGCAT...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGAAGTTCTTCCCGTACTaGCTGAGTCCCTTAACGAAG +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALKFFPY*LSPLTK
Trigger: CTTCGTTAAGGGACTCAGGCAGTACGGGAAGAACTT...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCCTCCTGAACACGGCCTaGCTGCGGTGCCTACGATGG +
Preference number: 4 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCLLNTA*LRCLRW
Trigger: CCATCGTAGGCACCGCAGGCAGGCCGTGTTCAGGAG...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCTACCCCTTCAGCTCCTaGTCACTGTCCTCACTGTCG +
Preference number: 4 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVYPFSS*SLSSLS
Trigger: CGACAGTGAGGACAGTGAGCAGGAGCTGAAGGGGTA...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGACTGCTTTACTGTCATTaGTGGAGGTACTGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: MFSPVQDSLSFWGTVMQGLLYCH*WRYWQR
Trigger: GCGCTGCCAGTACCTCCAGCAATGACAGTAAAGCAG...TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCGGGGTGCAAGGCCGGTaGCTGTTGGATGTGGGTGTG +
Preference number: 4 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCGVQGR*LLDVGV
Trigger: CACACCCACATCCAACAGGCACCGGCCTTGCACCCC...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACGCCAAACCCCAAGATTaGAGGGAAGCTTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHAKPQD*REAFWM
Trigger: CATCCAGAAAGCTTCCCTGCAATCTTGGGGTTTGGC...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCCAAACCCCAAGATTaGAGGGAAGCTTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLAKPQD*REAFWM
Trigger: CATCCAGAAAGCTTCCCTGCAATCTTGGGGTTTGGC...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGGTGTGTCAGTGTGTCTaGACGCACAGTGAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLVCQCV*THSEGC
Trigger: ACACCCTTCACTGTGCGTGCAGACACACTGACACAC...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCGATTCCAAATTCCTATaGCCCCGATCTGCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLDSKFL*PRSASL
Trigger: GAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGGATTCCAAATTCCTATaGCCCCGATCTGCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGDSKFL*PRSASL
Trigger: GAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGCTCCAGGATCTCCCTTaGTCAAAAGTGGCCTCAATC +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGLQDLP*SKVASI
Trigger: GATTGAGGCCACTTTTGAGCAAGGGAGATCCTGGAG...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATATCAGCATCTCTTCCTaGTCCCTCTGCGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYISISS*SLCGLG
Trigger: ACCCAGGCCGCAGAGGGAGCAGGAAGAGATGCTGAT...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGACTGCGGTGCCTACGATaGGCTCGGGAGCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRLRCLR*ARELAA
Trigger: AGCAGCCAGCTCCCGAGCCCATCGTAGGCACCGCAG...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCATTTGAACATAAACGGTaGCGGGTCCACGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPFEHKR*RVHGLL
Trigger: GAGAAGCCCGTGGACCCGCCACCGTTTATGTTCAAA...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGCCACCTTCTCCCGCTaGCGTTTGTTACTCTTAAGA +
Preference number: 4 (lower is better)
Translates to: WPQSVARKMGPSSPQDPSATFSR*RLLLLR
Trigger: TCTTAAGAGTAACAAACGCCAGCGGGAGAAGGTGGC...ACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACGCGTTTTTGTCTTCTTaGAGCTGGTCCTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNAFLSS*SWSCQP
Trigger: AGGCTGACAGGACCAGCTCCAAGAAGACAAAAACGC...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTCCTGGTCGATGTCTTTaGGGTCACTGCTACCCTCAT +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTPGRCL*GHCYPH
Trigger: ATGAGGGTAGCAGTGACCCCAAAGACATCGACCAGG...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCACTGGCTGGCGTGACTaGGGGTGTCCACCACAGTGG +
Preference number: 4 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCTGWRD*GCPPQW
Trigger: CCACTGTGGTGGACACCCCCAGTCACGCCAGCCAGT...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCGCTCCCGCTCGCGGATaGTGGGGTCGACGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCAPARG*WGRRCR
Trigger: TCTACAACGTCGACCCCACCATCCGCGAGCGGGAGC...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGAGGGCCAGGGGATCGCTaGTCAGCGATGCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRGPGDR*SAMPCA
Trigger: AGCGCATGGCATCGCTGACCAGCGATCCCCTGGCCC...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATGCTCTGGAGCACTCGTaGCGGAGTGTGTCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYALEHS*RSVSVC
Trigger: ACACACTGACACACTCCGCCACGAGTGCTCCAGAGC...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCGCGCTTTCCATCCCGTaGAAACAGAACAGTGACACT +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLALSIP*KQNSDT
Trigger: AGTGTCACTGTTCTGTTTCCACGGGATGGAAAGCGC...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCGCTTTCCATCCCGTaGAAACAGAACAGTGACACT +
Preference number: 4 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLALSIP*KQNSDT
Trigger: AGTGTCACTGTTCTGTTTCCACGGGATGGAAAGCGC...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGACAATGCGCTCTAACACATCCCTTTaGCAGGCATATGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: LWQERWGRPHHKIQVTMRSNTSL*QAYVLG
Trigger: ACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGA...GCGCATTGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGTCCCTTGCTCAAAAGTaGCCTCAATCTGTGGCAAGA +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALSLAQK*PQSVAR
Trigger: TCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGA...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CAGGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCTTTCTGAATGCACTGTaGGTGGGACTCCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: QDLPCSKVASICGKKDGAFLNAL*VGLQFP
Trigger: TGGGAACTGGAGTCCCACCCACAGTGCATTCAGAAA...GGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCCACCCGCCCTCAGCCTaGGAGAAAGTGCGTTACGGC +
Preference number: 4 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCHPPSA*EKVRYG
Trigger: GCCGTAACGCACTTTCTCCCAGGCTGAGGGCGGGTG...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATGAAGAGGCCACGTCCTaGCAGGAAGCAGGGCCGACA +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNEEATS*QEAGPT
Trigger: TGTCGGCCCTGCTTCCTGCCAGGACGTGGCCTCTTC...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGTCCGCCGACCCAGTGTaGTCTCTGTCCTACAATTCT +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLSADPV*SLSYNS
Trigger: AGAATTGTAGGACAGAGACCACACTGGGTCGGCGGA...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTGTTTTTAAGAGAAACTaGAAATGTCGCTATTTGACG +
Preference number: 4 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSVFKRN*KCRYLT
Trigger: CGTCAAATAGCGACATTTCCAGTTTCTCTTAAAAAC...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TGCAGATGCTCAACAGCCACAAGAGACCAGTGGTTACCACATTGGAAAGCACAGCTATTACAGGCACTCTaGTCTCCCGCCTACCCCATG +
Preference number: 4 (lower is better)
Translates to: CRCSTATRDQWLPHWKAQLLQAL*SPAYPM
Trigger: CATGGGGTAGGCGGGAGACCAGAGTGCCTGTAATAG...CTGTGCTTTCCAATGTGGTAACCACTGGTCTCTTGTGGCTGTTGAGCATCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR TCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGGCTCCGGCGTGGCCTTaGATTCTCACTCTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKAPAWP*ILTLSC
Trigger: GCAAGAGAGAGTGAGAATTCAAGGCCACGCCGGAGC...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR TCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTCCAGCACTTCTCGATaGGCTTGGGCACAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYSSTSR*AWAQAS
Trigger: AGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGA...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR TCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATGCGAGTTGGGCCTGCTaGTCTCCTGCGTTTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYASWAC*SPAFLS
Trigger: AGACAAAAACGCAGGAGATCAGCAGGCCCAACTCGC...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCAAGGAGCAGACACAAGTaGAACGCCAGGCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPRSRHK*NARQKT
Trigger: TGTTTTCTGCCTGGCGTTTCACTTGTGTCTGCTCCT...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAAAATGGAAGAGGTCTaGTGGAGCAGATGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGKMEEV*WSRCLC
Trigger: GCACAGACATCTGCTCCATCAGACCTCTTCCATTTT...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCCTGGAGAACAGAAAGTaGACATTCACCTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLLENRK*TFTSCT
Trigger: AGTGCAGGAGGTGAATGTTCACTTTCTGTTCTCCAG...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAACACAGCATGCTTTCTaGATGCACTGTGGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTTQHAF*MHCGWD
Trigger: GTCCCACCCACAGTGCATTCAGAAAGCATGCTGTGT...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCCAAGCCAATGTGGCCTaGAGTCCCACGACAAAAGGT +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTQANVA*SPTTKG
Trigger: ACCTTTTGTCGTGGGACTTCAGGCCACATTGGCTTG...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGGCTTCAAAGACACCATaGAGGTCAGGGCCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLASKTP*RSGPPK
Trigger: TTTAGGAGGCCCTGACCTTCATGGTGTCTTTGAAGC...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp TGCAGATGCTCAACAGCCACAAGAGACCAGTGGTTACCACATTGGAAAGCACAGCATGCAGAATGGCTGTaGCTTTCAAGAGAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: CRCSTATRDQWLPHWKAQHAEWL*LSRESP
Trigger: GGGGGACTCTCTTGAAAGTCACAGCCATTCTGCATG...CTGTGCTTTCCAATGTGGTAACCACTGGTCTCTTGTGGCTGTTGAGCATCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR TCA 90 bp TGCAGATGCTCAACAGCCACAAGAGACCAGTGGTTACCACATTGGAAAGCACAGCCAAACAAGGGAAACTaGAGACCTCGACCAGCACCA +
Preference number: 4 (lower is better)
Translates to: CRCSTATRDQWLPHWKAQPNKGN*RPRPAP
Trigger: TGGTGCTGGTCGAGGTCTTCAGTTTCCCTTGTTTGG...CTGTGCTTTCCAATGTGGTAACCACTGGTCTCTTGTGGCTGTTGAGCATCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR GCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGGGAGAAGGAAATGGTTaGAGATCTGGAAGTTTGGCC +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGGEGNG*RSGSLA
Trigger: GGCCAAACTTCCAGATCTGCAACCATTTCCTTCTCC...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGGGCGCTGCAGGGCTTTaGCAGCATCGTAACCGCTTT +
Preference number: 4 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKGAAGL*QHRNRF
Trigger: AAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCC...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGTTCTTCACCAGGCGCTaGAGGGCTTTGCCAGCATCG +
Preference number: 4 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKFFTRR*RALPAS
Trigger: CGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAA...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGGAAACTTTCTTCACCAGGCGCTaGAGGGCTTTGCCAGCATCG +
Preference number: 4 (lower is better)
Translates to: RPNAKVLKICPTSQTRETFFTRR*RALPAS
Trigger: CGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAA...AGTTTCCCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR GCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACAAGTTCTTCCCGTACTaGCTGAGTCCCTTAACGAAG +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNKFFPY*LSPLTK
Trigger: CTTCGTTAAGGGACTCAGGCAGTACGGGAAGAACTT...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAAGTTCTTCCCGTACTaGCTGAGTCCCTTAACGAAG +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGKFFPY*LSPLTK
Trigger: CTTCGTTAAGGGACTCAGGCAGTACGGGAAGAACTT...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCAAGTTCTTCCCGTACTaGCTGAGTCCCTTAACGAAG +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLKFFPY*LSPLTK
Trigger: CTTCGTTAAGGGACTCAGGCAGTACGGGAAGAACTT...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGACTCCTGAACACGGCCTaGCTGCGGTGCCTACGATGG +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRLLNTA*LRCLRW
Trigger: CCATCGTAGGCACCGCAGGCAGGCCGTGTTCAGGAG...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATATGTGGGGGTGTCCATaGAGCCACTGCTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYMWGCP*SHCCSM
Trigger: CATGGAGCAGCAGTGGCTGCATGGACACCCCCACAT...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTGTGTCAGTGTGTCTaGACGCACAGTGAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTVCQCV*THSEGC
Trigger: ACACCCTTCACTGTGCGTGCAGACACACTGACACAC...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTAGACGTAAAAAGCCATaGTGCAGAACTTTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: SGALVAECVSVSARTVKGRRKKP*CRTFSN
Trigger: ATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCT...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCACTCCAGGATCTCCCTTaGTCAAAAGTGGCCTCAATC +
Preference number: 4 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPLQDLP*SKVASI
Trigger: GATTGAGGCCACTTTTGAGCAAGGGAGATCCTGGAG...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCATGCAGACCTGCCCCTAGGCAAATGGTTTACCAGTaGAATGTGGGGTCACCATGC +
Preference number: 4 (lower is better)
Translates to: TQMVYQCNVGSPCRPAPRQMVYQ*NVGSPC
Trigger: GCATGGTGACCCCACATTGCACTGGTAAACCATTTG...CCTAGGGGCAGGTCTGCATGGTGACCCCACATTGCACTGGTAAACCATTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAAGCCCCCACACAGCATaGTTTCTGAATGCACTGTGG +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTSPHTA*FLNALW
Trigger: CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCT...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCAGCCCCCACACAGCATaGTTTCTGAATGCACTGTGG +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTSPHTA*FLNALW
Trigger: CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCT...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGATCTTCCTGCTCCCTCTaGGGCCTGGGTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRSSCSL*GLGPGW
Trigger: CCATCCAGGACCCAGGCCGCAGAGGGAGCAGGAAGA...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGCCAGAAGGAAACGAATaGCTTCAAGCCAATGTGGCC +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLPEGNE*LQANVA
Trigger: GGCCACATTGGCTTGAAGGCATTCGTTTCCTTCTGG...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CGTGCATCTACACTTGGGCCAGCACATTGCAGATGCTCAACAGCCACAAGAGACACCACAAGGCTACGCTaGTGGCTTTTGTTTGGAACA +
Preference number: 4 (lower is better)
Translates to: RASTLGPAHCRCSTATRDTTRLR*WLLFGT
Trigger: TGTTCCAAACAAAAGCCAGCAGCGTAGCCTTGTGGT...GTCTCTTGTGGCTGTTGAGCATCTGCAATGTGCTGGCCCAAGTGTAGATGCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCACACGAATCTCCCCCTaGGTACTGTTCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTTRISP*VLFSLL
Trigger: AAGGAGGCTGAACAGTACCCAGGGGGAGATTCGTGT...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR CCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCAAATGGTTGCAGATCTaGAAGTTTGGCCTGATGACT +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALKWLQI*KFGLMT
Trigger: AGTCATCAGGCCAAACTTCCAGATCTGCAACCATTT...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGACCAGTTCCTCATGTTaGGTCACTGTATCACCATCT +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALTSSSC*VTVSPS
Trigger: AGATGGTGATACAGTGACCCAACATGAGGAACTGGT...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGAGTGGTGGTGAAGCAGTaGCGGCAGGCGTACCCCTTC +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRVVVKQ*RQAYPF
Trigger: GAAGGGGTACGCCTGCCGCCACTGCTTCACCACCAC...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGCCGTATTTCTTGAAGTaGATGCGACAGTCGGTGCAA +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGPYFLK*MRQSVQ
Trigger: TTGCACCGACTGTCGCATCCACTTCAAGAAATACGG...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACATTTGAACATAAACGGTaGCGGGTCCACGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTFEHKR*RVHGLL
Trigger: GAGAAGCCCGTGGACCCGCCACCGTTTATGTTCAAA...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCCTTTACTGTCATTGCTaGAGGTACTGGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVLYCHC*RYWQRW
Trigger: CCAGCGCTGCCAGTACCTCCAGCAATGACAGTAAAG...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGCCTCCTTCACCTTCTTaGCCGACTTCTTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAEPPSPS*PTSSLS
Trigger: AGACAGTGAAGAAGTCGGCCAAGAAGGTGAAGGAGG...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGCCACCTTCTCCCGCTaGCGTTTGTTACTCTTAAGA +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTATFSR*RLLLLR
Trigger: TCTTAAGAGTAACAAACGCCAGCGGGAGAAGGTGGC...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTCTTCTTGGAGCTaGTCCTGTCAGCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYLSSWS*SCQPPP
Trigger: CGGAGGAGGCTGACAGGACCAGCTCCAAGAAGACAA...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGGCGTTTTTGTCTTCTTaGAGCTGGTCCTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAEAFLSS*SWSCQP
Trigger: AGGCTGACAGGACCAGCTCCAAGAAGACAAAAACGC...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTCCTGGTCGATGTCTTTaGGGTCACTGCTACCCTCAT +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSPGRCL*GHCYPH
Trigger: ATGAGGGTAGCAGTGACCCCAAAGACATCGACCAGG...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGAAGGCCGGTGCCTGTTaGATGTGGGTGTGGGGAACA +
Preference number: 4 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKKAGAC*MWVWGT
Trigger: TGTTCCCCACACCCACATCCAACAGGCACCGGCCTT...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTGAGGGCCCCGAGAGGTaGGGAGGGTGCTTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVEGPER*GGCLWA
Trigger: GGCCCACAAGCACCCTCCCCACCTCTCGGGGCCCTC...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATGCAGGTTGGCATTCATaGAGAAGGGTGAGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNAGWHS*RRVRAP
Trigger: CGGGGCCCTCACCCTTCTCCATGAATGCCAACCTGC...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGACCTCCTCCCTCTTCTTaGCCAGCTTGGACCCGGCCA +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRPPPSS*PAWTRP
Trigger: TGGCCGGGTCCAAGCTGGCCAAGAAGAGGGAGGAGG...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATGCTTGGCCTTCTCAATaGCCTCCTCCCTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYAWPSQ*PPPSSW
Trigger: CCAAGAAGAGGGAGGAGGCCATTGAGAAGGCCAAGC...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTGGGAAGCGAGCCAGGTaGGGACCGGCAGTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVGKRAR*GPAVRG
Trigger: CCCCCTGACTGCCGGTCCCCACCTGGCTCGCTTCCC...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATCATCTCGTGCTCGTGTaGGGGCTGTCCAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNHLVLV*GLSKQR
Trigger: CCTCTGCTTGGACAGCCCCCACACGAGCACGAGATG...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGTGAAGGGTGTGAACTaGATTCTAGCACCTACTGAG +
Preference number: 4 (lower is better)
Translates to: WPQSVARKMGPSSPQDPSVKGVN*ILAPTE
Trigger: CTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCAC...ACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATAAGCCTCTGTCCATGTaGAACGCCCCTTTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYKPLSM*NAPLLP
Trigger: AGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTT...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCCGTCCCTGCAAACCCTaGATGCTCGCTGCTGTGACC +
Preference number: 4 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCRPCKP*MLAAVT
Trigger: GGTCACAGCAGCGAGCATCCAGGGTTTGCAGGGACG...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACACTCCCTGTGCAAAATaGAAGAGGTCTGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNTPCAK*KRSDGA
Trigger: TGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGT...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACGAAGGAAATCTACAATaGACACAGGCCCATGCGCTT +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNEGNLQ*TQAHAL
Trigger: AAGCGCATGGGCCTGTGTCCATTGTAGATTTCCTTC...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAAGTGGCCTCAATCTGTaGCAAGAAAGATGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTSGLNL*QERWGR
Trigger: ACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACT...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTTTTCTGAATGCACTGTaGGTGGGACTCCAGTTCCCA +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTFLNAL*VGLQFP
Trigger: TGGGAACTGGAGTCCCACCCACAGTGCATTCAGAAA...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACCTGTCCTACAATTCTTaGGATGGGACCAGCACAATG +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHLSYNS*DGTSTM
Trigger: CATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAG...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCTCCGCCGACCCAGTGTaGTCTCTGTCCTACAATTCT +
Preference number: 4 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVSADPV*SLSYNS
Trigger: AGAATTGTAGGACAGAGACCACACTGGGTCGGCGGA...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGGTTTTTAAGAGAAACTaGAAATGTCGCTATTTGACG +
Preference number: 4 (lower is better)
Translates to: NSYAPDLQASWALEHSWRVFKRN*KCRYLT
Trigger: CGTCAAATAGCGACATTTCCAGTTTCTCTTAAAAAC...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTGCCTTCAAGCCAATGTaGCCTGAAGTCCCACGACAA +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSAFKPM*PEVPRQ
Trigger: TTGTCGTGGGACTTCAGGCCACATTGGCTTGAAGGC...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCCAGAAGCCGAGAAGGTaGGGGCCTGGATGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCQKPRR*GPGCRS
Trigger: ACTCCTGCATCCAGGCCCCCACCTTCTCGGCTTCTG...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGACTAACAACTCAAAATaGAGGCACATGCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: IPNSYAPDLQASWALEHSTNNSK*RHMQSQ
Trigger: CTGAGACTGCATGTGCCTCCATTTTGAGTTGTTAGT...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377464.5
3UTR CAA 72 bp CTGCCCCCAACACCTGTCTTAACTCCAGGATCTCCCTaGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LPPTPVLTPGSP*LKSGLNLWQER
Trigger: TCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTGGAGTTAAGACAGGTGTTGGGGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATTCCAGCACTTCTCGATaGGCTTGGGCACAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYSSTSR*AWAQAS
Trigger: AGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGA...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR TCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTGGGTCGACCAGCGGGTaGACGGGGCCTGCTGAACCT +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVGSTSG*TGPAEP
Trigger: AGGTTCAGCAGGCCCCGTTCACCCGCTGGTCGACCC...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACGTGGAAACAGAACAGTaGCACTGGAGAACAGAAAGT +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHVETEQ*HWRTES
Trigger: ACTTTCTGTTCTCCAGTGTCACTGTTCTGTTTCCAC...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGGTGGAAACAGAACAGTaGCACTGGAGAACAGAAAGT +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGVETEQ*HWRTES
Trigger: ACTTTCTGTTCTCCAGTGTCACTGTTCTGTTTCCAC...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGGGAAATGTCGCTATTTaGCGCCAGAACCTGAATTTG +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGGNVAI*RQNLNL
Trigger: CAAATTCAGGTTCTGGCGTCAAATAGCGACATTTCC...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp TGCAGATGCTCAACAGCCACAAGAGACCAGTGGTTACCACATTGGAAAGCACAGTCCATCACACATTCCTaGAAATGCCGCCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: CRCSTATRDQWLPHWKAQSITHS*KCRHAP
Trigger: AGGAGCATGGCGGCATTTGCAGGAATGTGTGATGGA...CTGTGCTTTCCAATGTGGTAACCACTGGTCTCTTGTGGCTGTTGAGCATCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR GCA 90 bp ATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCATGCAGTGTGTTCAGTaGATTCAGAGTGGTGTCATC +
Preference number: 4 (lower is better)
Translates to: ISLAQKWPQSVARKMGPSMQCVQ*IQSGVI
Trigger: GATGACACCACTCTGAATGCACTGAACACACTGCAT...GGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATGGCGCTGCAGGGCTTTaGCAGCATCGTAACCGCTTT +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNGAAGL*QHRNRF
Trigger: AAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCC...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp AGAATTCGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGGGCGCTGCAGGGCTTTaGCAGCATCGTAACCGCTTT +
Preference number: 4 (lower is better)
Translates to: RIRPNAKVLKICPTSQTRGAAGL*QHRNRF
Trigger: AAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCC...CCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCGAATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR GCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATTTCTTCACCAGGCGCTaGAGGGCTTTGCCAGCATCG +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNFFTRR*RALPAS
Trigger: CGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAA...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGGCTTCTTCCGACCACTaGGTAGTGTCGACATCGAGC +
Preference number: 4 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKASSDH*VVSTSS
Trigger: GCTCGATGTCGACACTACGCAGTGGTCGGAAGAAGC...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATGTGGATACGCTCGGCTaGCAGTCTGTCAGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNVDTLG*QSVRVA
Trigger: AGCTACCCTGACAGACTGGCAGCCGAGCGTATCCAC...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATATGTGGGGGTGTCCATaGAGCCACTGCTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNMWGCP*SHCCSM
Trigger: CATGGAGCAGCAGTGGCTGCATGGACACCCCCACAT...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATGTGTGTCAGTGTGTCTaGACGCACAGTGAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYVCQCV*THSEGC
Trigger: ACACCCTTCACTGTGCGTGCAGACACACTGACACAC...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp ATTCGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGGAATGGCATGAGCCACTGTaGCCAGCCAGATCTCACTCC +
Preference number: 4 (lower is better)
Translates to: IRPNAKVLKICPTSQTREWHEPL*PARSHS
Trigger: GGAGTGAGATCTGGCTGGGCACAGTGGCTCATGCCA...TTCCCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR GCA 90 bp ACAGGCACTCTGGTCTCCCGCCTACCCCATGCAGGATGGCTATCCCCATGCAGACATTCTTTTTCTTCCTaGTCAGTCTTTGAAATCAGT +
Preference number: 4 (lower is better)
Translates to: TGTLVSRLPHAGWLSPCRHSFSS*SVFEIS
Trigger: ACTGATTTCAAAGACTGAGCAGGAAGAAAAAGAATG...TCTGCATGGGGATAGCCATCCTGCATGGGGTAGGCGGGAGACCAGAGTGCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATGCCCAGGATCATGTCTaGTTTTGTTTTCCGAGGGCG +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYAQDHV*FCFPRA
Trigger: CGCCCTCGGAAAACAAAACCAGACATGATCCTGGGC...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR CCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGCTGATACACAGAATCTaGAACCTCAGATTGACGGTA +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALLIHRI*NLRLTV
Trigger: TACCGTCAATCTGAGGTTCCAGATTCTGTGTATCAG...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCGAAGTCATCTTCACTaGCTGAACTTAGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNRSHLH*LNLGPR
Trigger: TCTTGGACCTAAGTTCAGCCAGTGAAGATGACTTCG...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATCTTTACTGTCATTGCTaGAGGTACTGGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYLYCHC*RYWQRW
Trigger: CCAGCGCTGCCAGTACCTCCAGCAATGACAGTAAAG...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGCCACCTTCTCCCGCTaGCGTTTGTTACTCTTAAGA +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTATFSR*RLLLLR
Trigger: TCTTAAGAGTAACAAACGCCAGCGGGAGAAGGTGGC...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTTGTGGCGCCGGCAGCTaGGGGATGGGAGTGGTAGGC +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVCGAGS*GMGVVG
Trigger: GCCTACCACTCCCATCCCCCAGCTGCCGGCGCCACA...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCGGGTGTCCACCACAGTaGGCTCCGGGGACGGGCTCC +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFGCPPQ*APGTGS
Trigger: GGAGCCCGTCCCCGGAGCCCACTGTGGTGGACACCC...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATAATGGTGGTTGGTGGTaGCTCGAAGGATGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYNGGWW*LEGWPH
Trigger: ATGCGGCCATCCTTCGAGCCACCACCAACCACCATT...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGAATGGTGGTTGGTGGTaGCTCGAAGGATGGCCGCAT +
Preference number: 4 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKNGGWW*LEGWPH
Trigger: ATGCGGCCATCCTTCGAGCCACCACCAACCACCATT...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATAGCAGCAATGGTGGTTaGTGGTGGCTCGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYSSNGG*WWLEGW
Trigger: CCATCCTTCGAGCCACCACCAACCACCATTGCTGCT...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCGACTCACTAAGTTTCTaGGGGACTGTCATGCAGGGA +
Preference number: 4 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVDSLSF*GTVMQG
Trigger: TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTC...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGGTGAAGGGTGTGAACTaGATTCTAGCACCTACTGAG +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAEVKGVN*ILAPTE
Trigger: CTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCAC...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGCGCTTTCCATCCCGTaGAAACAGAACAGTGACACT +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTALSIP*KQNSDT
Trigger: AGTGTCACTGTTCTGTTTCCACGGGATGGAAAGCGC...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTGCGCTTTCCATCCCGTaGAAACAGAACAGTGACACT +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSALSIP*KQNSDT
Trigger: AGTGTCACTGTTCTGTTTCCACGGGATGGAAAGCGC...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCTGTCCTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTCTAACACATCCCTTTaGCAGGCATATGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SVLQFLGWDQHNGRRDLQSNTSL*QAYVLG
Trigger: ACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGA...CTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACAGAGTGGGACTCAAATaGTTTACCAGTGCAATGTGG +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHRVGLK*FTSAMW
Trigger: CCACATTGCACTGGTAAACCATTTGAGTCCCACTCT...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGTTCCAGGATGAAGAGTaGGACTCAAATGGTTTACCA +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALFQDEE*DSNGLP
Trigger: TGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGCTACAATTCTTGGGATaGGACCAGCACAATGGCAGA +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLLQFLG*DQHNGR
Trigger: TCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATACACGAATCTCCCCCTaGGTACTGTTCAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYTRISP*VLFSLL
Trigger: CAGGAGGCTGAACAGTACCCAGGGGGAGATTCGTGT...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377464.5
CDS-3UTR TCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATGTCTTCATTGATGGGTaGGGTGCGACCATCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNVFIDG*GATIRA
Trigger: AGCCCTGATGGTCGCACCTCACCCATCAATGAAGAC...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCTGCTACCCTCATCGTTaGCGCTGCGACTGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCCYPHR*RCDCLN
Trigger: GTTCAGACAGTCGCAGCGTCAACGATGAGGGTAGCA...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGATTCTAGCACCTACTaGGAAATCAAGGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: DSKFLCPRSASLVGSGALDSSTY*EIKEKK
Trigger: TTTCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATC...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTCTGGAGAACAGAAAGTaGACATTCACCTCCTGCACT +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSLENRK*TFTSCT
Trigger: AGTGCAGGAGGTGAATGTTCACTTTCTGTTCTCCAG...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp AGAAGGCAGCCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGGTGGAAACAGAACAGTaGCACTGGAGAACAGAAAGT +
Preference number: 4 (lower is better)
Translates to: RRQPSNTSLWQAYVLGHLVETEQ*HWRTES
Trigger: ACTTTCTGTTCTCCAGTGTCACTGTTCTGTTTCCAC...CAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGGCTGCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGCAAGCCTATCCCAACTaGAACCAAACACGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGQAYPN*NQTRFL
Trigger: TAAAAACCGTGTTTGGTTTCAGTTGGGATAGGCTTG...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATCGCCATGCTCCTTGCTaGCCTCAAGTACATAAGGAG +
Preference number: 4 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYRHAPC*PQVHKE
Trigger: CTCCTTATGTACTTGAGGGCAGCAAGGAGCATGGCG...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATTGCCGCCATGCTCCTTaGTGCCCTCAAGTACATAAG +
Preference number: 4 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYCRHAP*CPQVHK
Trigger: CTTATGTACTTGAGGGCAGCAAGGAGCATGGCGGCA...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATACACATTCCTGCAAATaGCGCCATGCTCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYTHSCK*RHAPCC
Trigger: GCAGCAAGGAGCATGGCGGCATTTGCAGGAATGTGT...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTATGCAGTGTGTTCAGTaGATTCAGAGTGGTGTCATC +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTMQCVQ*IQSGVI
Trigger: GATGACACCACTCTGAATGCACTGAACACACTGCAT...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGGAGAGGTGGGGAGGGTaGTTGTGGGCCTGTGGCGCC +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWERWGG*LWACGA
Trigger: GGCGCCACAGGCCCACAAGCACCCTCCCCACCTCTC...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGGTGTGTCAGTGTGTCTaGACGCACAGTGAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKVCQCV*THSEGC
Trigger: ACACCCTTCACTGTGCGTGCAGACACACTGACACAC...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATCTCCAGGATCTCCCTTaGTCAAAAGTGGCCTCAATC +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYLQDLP*SKVASI
Trigger: GATTGAGGCCACTTTTGAGCAAGGGAGATCCTGGAG...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACACAAATGGTTTACCAGTaGAATGTGGGGTCACCATGC +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTQMVYQ*NVGSPC
Trigger: GCATGGTGACCCCACATTGCACTGGTAAACCATTTG...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CAGGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCCTGATACACAGAATCTaGAACCTCAGATTGACGGTA +
Preference number: 4 (lower is better)
Translates to: QDLPCSKVASICGKKDGALIHRI*NLRLTV
Trigger: TACCGTCAATCTGAGGTTCCAGATTCTGTGTATCAG...GGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR CCA 90 bp CTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGACAATGCGCTCGGTTCTTGATAACTaGGTCTGTAATGACAAGTTC +
Preference number: 4 (lower is better)
Translates to: LWQERWGRPHHKIQVTMRSVLDN*VCNDKF
Trigger: GAACTTGTCATTACAGACCCAGTTATCAAGAACCGA...GCGCATTGTCACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR CCA 90 bp CGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGGAAACTACACGAATCTCCCCCTaGGTACTGTTCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: RPNAKVLKICPTSQTRETTRISP*VLFSLL
Trigger: AAGGAGGCTGAACAGTACCCAGGGGGAGATTCGTGT...AGTTTCCCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACAAATGGTTGCAGATCTaGAAGTTTGGCCTGATGACT +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHKWLQI*KFGLMT
Trigger: AGTCATCAGGCCAAACTTCCAGATCTGCAACCATTT...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCAAATGGTTGCAGATCTaGAAGTTTGGCCTGATGACT +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLKWLQI*KFGLMT
Trigger: AGTCATCAGGCCAAACTTCCAGATCTGCAACCATTT...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGAACCATCAGGGCTGGCTaGCTGCTTCTTCCGACCACT +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRTIRAG*LLLPTT
Trigger: AGTGGTCGGAAGAAGCAGCCAGCCAGCCCTGATGGT...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATCTTTACTGTCATTGCTaGAGGTACTGGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYLYCHC*RYWQRW
Trigger: CCAGCGCTGCCAGTACCTCCAGCAATGACAGTAAAG...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATGCGTTTTTGTCTTCTTaGAGCTGGTCCTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYAFLSS*SWSCQP
Trigger: AGGCTGACAGGACCAGCTCCAAGAAGACAAAAACGC...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGTGCTGCGATTGTCCTaGTCGATGTCTTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYVLRLS*SMSLGS
Trigger: TGACCCCAAAGACATCGACCAGGACAATCGCAGCAC...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGATGTTGGATGTGGGTGTaGGGAACAGGCGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRCWMWV*GTGAVG
Trigger: TCCCACAGCGCCTGTTCCCCACACCCACATCCAACA...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGGAGGCCAAAGGGCTGTaGGGGGCCTGGGTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWEAKGL*GAWVLQ
Trigger: CTGCAGCACCCAGGCCCCCCACAGCCCTTTGGCCTC...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCGCTTGGCCTTCTCAATaGCCTCCTCCCTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCAWPSQ*PPPSSW
Trigger: CCAAGAAGAGGGAGGAGGCCATTGAGAAGGCCAAGC...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGAAGGACCACTGAGCTGTaGGTCACTGAGGCGACCTTC +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRRTTEL*VTEATF
Trigger: GAAGGTCGCCTCAGTGACCCACAGCTCAGTGGTCCT...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCCATGGGGTTGGCGGCTaGGTGCAGGGGGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFHGVGG*VQGVQL
Trigger: GAGCTGGACCCCCTGCACCCAGCCGCCAACCCCATG...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCGTGAAGGGTGTGAACTaGATTCTAGCACCTACTGAG +
Preference number: 4 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVVKGVN*ILAPTE
Trigger: CTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCAC...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTGTGAAGGGTGTGAACTaGATTCTAGCACCTACTGAG +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSVKGVN*ILAPTE
Trigger: CTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCAC...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGAGCTCTGGAGCACTCGTaGCGGAGTGTGTCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRALEHS*RSVSVC
Trigger: ACACACTGACACACTCCGCCACGAGTGCTCCAGAGC...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACTCCCTGTGCAAAATaGAAGAGGTCTGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVTPCAK*KRSDGA
Trigger: TGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGT...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAACTCCCTGTGCAAAATaGAAGAGGTCTGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTTPCAK*KRSDGA
Trigger: TGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGT...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTACTCCCTGTGCAAAATaGAAGAGGTCTGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSTPCAK*KRSDGA
Trigger: TGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGT...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCGAAGGAAATCTACAATaGACACAGGCCCATGCGCTT +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTEGNLQ*TQAHAL
Trigger: AAGCGCATGGGCCTGTGTCCATTGTAGATTTCCTTC...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTGAAGGAAATCTACAATaGACACAGGCCCATGCGCTT +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSEGNLQ*TQAHAL
Trigger: AAGCGCATGGGCCTGTGTCCATTGTAGATTTCCTTC...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGAGAGTGGGACTCAAATaGTTTACCAGTGCAATGTGG +
Preference number: 4 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAERVGLK*FTSAMW
Trigger: CCACATTGCACTGGTAAACCATTTGAGTCCCACTCT...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCCTACAATTCTTGGGATaGGACCAGCACAATGGCAGA +
Preference number: 4 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVLQFLG*DQHNGR
Trigger: TCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGCCTTCAAGCCAATGTaGCCTGAAGTCCCACGACAA +
Preference number: 4 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYAFKPM*PEVPRQ
Trigger: TTGTCGTGGGACTTCAGGCCACATTGGCTTGAAGGC...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TGCAGATGCTCAACAGCCACAAGAGACCAGTGGTTACCACATTGGAAAGCACAGCTGCTGGCTTTTGTTTaGAACAATAGCGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: CRCSTATRDQWLPHWKAQLLAFV*NNSAPM
Trigger: CATGGGAGCGCTATTGTTCCAAACAAAAGCCAGCAG...CTGTGCTTTCCAATGTGGTAACCACTGGTCTCTTGTGGCTGTTGAGCATCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CCA 90 bp CGTGCATCTACACTTGGGCCAGCACATTGCAGATGCTCAACAGCCACAAGAGACACAAGGCTACGCTGCTaGCTTTTGTTTGGAACAATA +
Preference number: 4 (lower is better)
Translates to: RASTLGPAHCRCSTATRDTRLRC*LLFGTI
Trigger: TATTGTTCCAAACAAAAGCCAGCAGCGTAGCCTTGT...GTCTCTTGTGGCTGTTGAGCATCTGCAATGTGCTGGCCCAAGTGTAGATGCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CCA 90 bp CGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGGAAACTCCGTGCATCTACACTTaGGCCAGCACATTGCAGATG +
Preference number: 4 (lower is better)
Translates to: RPNAKVLKICPTSQTRETPCIYT*ASTLQM
Trigger: CATCTGCAATGTGCTGGCCCAAGTGTAGATGCACGG...AGTTTCCCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR TCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGAGTCTTCATTGATGGGTaGGGTGCGACCATCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRVFIDG*GATIRA
Trigger: AGCCCTGATGGTCGCACCTCACCCATCAATGAAGAC...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCCGCTATGCTGCCTCCTaGAGCCGCCGCACCAGAGCA +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFRYAAS*SRRTRA
Trigger: TGCTCTGGTGCGGCGGCTTCAGGAGGCAGCATAGCG...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTCCAGAGCCTCCTCCTTaGTCTGGACGGTGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVPEPPP*SGRWGV
Trigger: CACTCCCCACCGTCCAGATCAAGGAGGAGGCTCTGG...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTGTGGAAACAGAACAGTaGCACTGGAGAACAGAAAGT +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSVETEQ*HWRTES
Trigger: ACTTTCTGTTCTCCAGTGTCACTGTTCTGTTTCCAC...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp AGAATTCGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGTGCCGCCATGCTCCTTaGTGCCCTCAAGTACATAAG +
Preference number: 4 (lower is better)
Translates to: RIRPNAKVLKICPTSQTRCRHAP*CPQVHK
Trigger: CTTATGTACTTGAGGGCAGCAAGGAGCATGGCGGCA...CCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCGAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR GCA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCACACATTCCTGCAAATaGCGCCATGCTCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCTHSCK*RHAPCC
Trigger: GCAGCAAGGAGCATGGCGGCATTTGCAGGAATGTGT...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATAAGTTCTTCCCGTACTaGCTGAGTCCCTTAACGAAG +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYKFFPY*LSPLTK
Trigger: CTTCGTTAAGGGACTCAGGCAGTACGGGAAGAACTT...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATCTGCTTTACTGTCATTaGTGGAGGTACTGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNLLYCH*WRYWQR
Trigger: GCGCTGCCAGTACCTCCAGCAATGACAGTAAAGCAG...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTGCCTGCAGCATCTGCTaGTGGGCTGACGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVACSIC*WADESE
Trigger: CTCGGACTCGTCAGCCCAGCAGCAGATGCTGCAGGC...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTCGATGCCATGCGCTCTaGGTGGATACGCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVRCHAL*VDTLGC
Trigger: GCAGCCGAGCGTATCCACGCAGAGCGCATGGCATCG...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTTCCATGGCCAGTCTCTaGAGCTCGGCCGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVSMASL*SSADWA
Trigger: TGCCCAGTCGGCCGAGCTGCAGAGACTGGCCATGGA...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGCGTAAAAAGCCATGCTaGAGAACTTTCTCCAATTAT +
Preference number: 4 (lower is better)
Translates to: SSWIPNSYAPDLQASWALRKKPC*RTFSNY
Trigger: ATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACG...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATCAAATGGTTTACCAGTaGAATGTGGGGTCACCATGC +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYQMVYQ*NVGSPC
Trigger: GCATGGTGACCCCACATTGCACTGGTAAACCATTTG...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATAGCATGCTTTCTGAATaGACTGTGGGTGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYSMLSE*TVGGTP
Trigger: TGGAGTCCCACCCACAGTGCATTCAGAAAGCATGCT...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGTCGGTTCTTGATAACTaGGTCTGTAATGACAAGTTC +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGSVLDN*VCNDKF
Trigger: GAACTTGTCATTACAGACCCAGTTATCAAGAACCGA...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACTCGGTTCTTGATAACTaGGTCTGTAATGACAAGTTC +
Preference number: 4 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHSVLDN*VCNDKF
Trigger: GAACTTGTCATTACAGACCCAGTTATCAAGAACCGA...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTACCAGTTCCTCATGTTaGGTCACTGTATCACCATCT +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSTSSSC*VTVSPS
Trigger: AGATGGTGATACAGTGACCCAACATGAGGAACTGGT...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTGTGGTGGTGAAGCAGTaGCGGCAGGCGTACCCCTTC +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVVVVKQ*RQAYPF
Trigger: GAAGGGGTACGCCTGCCGCCACTGCTTCACCACCAC...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATTTTGAACATAAACGGTaGCGGGTCCACGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNFEHKR*RVHGLL
Trigger: GAGAAGCCCGTGGACCCGCCACCGTTTATGTTCAAA...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCTTTGAACATAAACGGTaGCGGGTCCACGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCFEHKR*RVHGLL
Trigger: GAGAAGCCCGTGGACCCGCCACCGTTTATGTTCAAA...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGATCCCTCACCTTCAGATaGCGAGTTGGGCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRSLTFR*RVGPAD
Trigger: ATCAGCAGGCCCAACTCGCCATCTGAAGGTGAGGGA...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCGTGCTGCGATTGTCCTaGTCGATGTCTTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCVLRLS*SMSLGS
Trigger: TGACCCCAAAGACATCGACCAGGACAATCGCAGCAC...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ATTCATCCAGAACAATCAAGTGTGTGTACACAGAAATCTAGAAGGAAATCTACACGTGGGGGAGCCCTGTaGGGGAACTGCAGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: IHPEQSSVCTQKSRRKSTRGGAL*GNCSGR
Trigger: TCTGCCACTGCAGTTCCCCCACAGGGCTCCCCCACG...TGTAGATTTCCTTCTAGATTTCTGTGTACACACACTTGATTGTTCTGGATGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTGCTCCCGCTCGCGGATaGTGGGGTCGACGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVAPARG*WGRRCR
Trigger: TCTACAACGTCGACCCCACCATCCGCGAGCGGGAGC...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATTCATCCAGAACAATCAAGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAAGTGCTCCATGGGGTTaGCGGCTGGGTGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: IHPEQSSVCTQKSRRKSTSAPWG*RLGAGG
Trigger: ACCCCCTGCACCCAGCCGCCAACCCCATGGAGCACT...TGTAGATTTCCTTCTAGATTTCTGTGTACACACACTTGATTGTTCTGGATGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ATTCATCCAGAACAATCAAGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAGGGCCAGGGGATCGCTaGTCAGCGATGCCATGCGCT +
Preference number: 4 (lower is better)
Translates to: IHPEQSSVCTQKSRRKSTGPGDR*SAMPCA
Trigger: AGCGCATGGCATCGCTGACCAGCGATCCCCTGGCCC...TGTAGATTTCCTTCTAGATTTCTGTGTACACACACTTGATTGTTCTGGATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGAAAGCCTCTGTCCATGTaGAACGCCCCTTTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRKPLSM*NAPLLP
Trigger: AGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTT...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTTTCCAGGATGAAGAGTaGGACTCAAATGGTTTACCA +
Preference number: 4 (lower is better)
Translates to: VSVSARTVKGVNWILAPTFQDEE*DSNGLP
Trigger: TGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGGACTCGACTCTTCTTTaGAAAAATGGATGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLDSTLL*KNGCQR
Trigger: CCTTTGGCATCCATTTTTCCAAAGAAGAGTCGAGTC...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp AAGCCAAACCTCAGTCATAATGCAGATCCCTGTCTAACAGGTGATCATTGTTTTTCCAGCACTTCTCGATaGGCTTGGGCACAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: KPNLSHNADPCLTGDHCFSSTSR*AWAQAS
Trigger: AGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGA...AAAACAATGATCACCTGTTAGACAGGGATCTGCATTATGACTGAGGTTTGGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR TCA 90 bp ATTCATCCAGAACAATCAAGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAACCCGGCCAGAGGCATaGAGTACAGGTCTGTCCGGG +
Preference number: 4 (lower is better)
Translates to: IHPEQSSVCTQKSRRKSTTRPEA*STGLSG
Trigger: CCCGGACAGACCTGTACTTCATGCCTCTGGCCGGGT...TGTAGATTTCCTTCTAGATTTCTGTGTACACACACTTGATTGTTCTGGATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATAGGAGCAGACACAAGTaGAACGCCAGGCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNRSRHK*NARQKT
Trigger: TGTTTTCTGCCTGGCGTTTCACTTGTGTCTGCTCCT...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR TCA 90 bp TTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCCAAGCCTATCCCAACTaGAACCAAACACGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: FQDEEWDSNGLPVQCGVTQAYPN*NQTRFL
Trigger: TAAAAACCGTGTTTGGTTTCAGTTGGGATAGGCTTG...GGTGACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTCAAGCCTATCCCAACTaGAACCAAACACGGTTTTTA +
Preference number: 4 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSQAYPN*NQTRFL
Trigger: TAAAAACCGTGTTTGGTTTCAGTTGGGATAGGCTTG...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGACAAGCCAATGTGGCCTaGAGTCCCACGACAAAAGGT +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRQANVA*SPTTKG
Trigger: ACCTTTTGTCGTGGGACTTCAGGCCACATTGGCTTG...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATTCCATCACACATTCCTaGAAATGCCGCCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNSITHS*KCRHAP
Trigger: AGGAGCATGGCGGCATTTGCAGGAATGTGTGATGGA...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp ATTCATCCAGAACAATCAAGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAGGCTCGGGAGCTGGCTaGTTCGGGGGTCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: IHPEQSSVCTQKSRRKSTGSGAG*FGGLLP
Trigger: TGGAAGAAGACCCCCGAAGCAGCCAGCTCCCGAGCC...TGTAGATTTCCTTCTAGATTTCTGTGTACACACACTTGATTGTTCTGGATGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCGCCTGCAGCATCTGCTaGTGGGCTGACGAGTCCGAG +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFACSIC*WADESE
Trigger: CTCGGACTCGTCAGCCCAGCAGCAGATGCTGCAGGC...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCCGATGCCATGCGCTCTaGGTGGATACGCTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFRCHAL*VDTLGC
Trigger: GCAGCCGAGCGTATCCACGCAGAGCGCATGGCATCG...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ATTCATCCAGAACAATCAAGTGTGTGTACACAGAAATCTAGAAGGAAATCTACATCCATGGCCAGTCTCTaGAGCTCGGCCGACTGGGCA +
Preference number: 4 (lower is better)
Translates to: IHPEQSSVCTQKSRRKSTSMASL*SSADWA
Trigger: TGCCCAGTCGGCCGAGCTGCAGAGACTGGCCATGGA...TGTAGATTTCCTTCTAGATTTCTGTGTACACACACTTGATTGTTCTGGATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTGGTAGGTGGCCACCATaGATGTGGGGGTGTCCATGC +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVGRWPP*MWGCPC
Trigger: GCATGGACACCCCCACATGCATGGTGGCCACCTACC...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGCGTAAAAAGCCATGCTaGAGAACTTTCTCCAATTAT +
Preference number: 4 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGRKKPC*RTFSNY
Trigger: ATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACG...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGCGTAAAAAGCCATGCTaGAGAACTTTCTCCAATTAT +
Preference number: 4 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLRKKPC*RTFSNY
Trigger: ATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACG...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAAGACGTAAAAAGCCATaGTGCAGAACTTTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: MFSPVQDSLSFWGTVMQGRRKKP*CRTFSN
Trigger: ATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCT...TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATCCAGAAGGAAACGAATaGCTTCAAGCCAATGTGGCC +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNPEGNE*LQANVA
Trigger: GGCCACATTGGCTTGAAGGCATTCGTTTCCTTCTGG...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTTGTGCACGCTGCCTCTaGCGCAGTGGAGTGAAGCTC +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVCARCL*RSGVKL
Trigger: GAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACA...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ACTAATAGCTCATTTACATACACAGCTGGATACAATGGGCTGCATGCAGAGGGGATACAATGGGCTGCATaGAGAGGGGAGTTTGAGTTC +
Preference number: 4 (lower is better)
Translates to: TNSSFTYTAGYNGLHAEGIQWAA*RGEFEF
Trigger: GAACTCAAACTCCCCTCTGCATGCAGCCCATTGTAT...CCCCTCTGCATGCAGCCCATTGTATCCAGCTGTGTATGTAAATGAGCTATTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATACCAGTTCCTCATGTTaGGTCACTGTATCACCATCT +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYTSSSC*VTVSPS
Trigger: AGATGGTGATACAGTGACCCAACATGAGGAACTGGT...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGGATGGGCTCGGGAGCTaGCTGCTTCGGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWDGLGS*LLRGSS
Trigger: AGAAGACCCCCGAAGCAGCCAGCTCCCGAGCCCATC...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGGGGCGAGGAGGGCAATaGCTGGCTCTGAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWGRGGQ*LALRHE
Trigger: CTCATGCCTCAGAGCCAGCCATTGCCCTCCTCGCCC...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTGGGGGTGCCGAAAACTaGGTGGCGAAGCATCTCGTG +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVGGAEN*VAKHLV
Trigger: CACGAGATGCTTCGCCACCCAGTTTTCGGCACCCCC...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTTGGCCACCATGCATGTaGGGGTGTCCATGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVWPPCM*GCPCSH
Trigger: GTGGCTGCATGGACACCCCCACATGCATGGTGGCCA...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTCGTCCCTGCAAACCCTaGATGCTCGCTGCTGTGACC +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVRPCKP*MLAAVT
Trigger: GGTCACAGCAGCGAGCATCCAGGGTTTGCAGGGACG...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGCTGGTGGTGAAGCAGTaGCGGCAGGCGTACCCCTTC +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWLVVKQ*RQAYPF
Trigger: GAAGGGGTACGCCTGCCGCCACTGCTTCACCACCAG...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400907.6
CDS-3UTR CCA 90 bp AGAATTCGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGAGCCTCCCAAAGAGTTaGGATTATGGCATGAGCCAC +
Preference number: 4 (lower is better)
Translates to: RIRPNAKVLKICPTSQTRSLPKS*DYGMSH
Trigger: GTGGCTCATGCCATAATCCCAACTCTTTGGGAGGCT...CCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCGAATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
3UTR CAA 72 bp GGCCTGAAGTCCCACGACAAAAGGTTCATGTCAGCTTaGCCTCCCTGTGAACAAACTAAAGTTAAGGCAGAA +
Preference number: 4 (lower is better)
Translates to: GLKSHDKRFMSA*PPCEQTKVKAE
Trigger: TTCTGCCTTAACTTTAGTTTGTTCACAGGGAGGCAAAGCTGACATGAACCTTTTGTCGTGGGACTTCAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
3UTR CAA 72 bp ATCAGTGTGTATTTTACACTGACCGTGCATCTACACTaGGGCCAGCACATTGCAGATGCTCAACAGCCACAA +
Preference number: 4 (lower is better)
Translates to: ISVYFTLTVHLH*GQHIADAQQPQ
Trigger: TTGTGGCTGTTGAGCATCTGCAATGTGCTGGCCCAAGTGTAGATGCACGGTCAGTGTAAAATACACACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR TCA 90 bp ATTCATCCAGAACAATCAAGTGTGTGTACACAGAAATCTAGAAGGAAATCTACACATCTGCTGCTGGGCTaGCGAGTCCGAGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: IHPEQSSVCTQKSRRKSTHLLLG*RVRVTL
Trigger: GAGAGTGACTCGGACTCGTCAGCCCAGCAGCAGATG...TGTAGATTTCCTTCTAGATTTCTGTGTACACACACTTGATTGTTCTGGATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGGGTGCGGAGTCACGTTaGACATCTGCAGTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWGAESR*TSAVGP
Trigger: TGGCCCGACTGCAGATGTTCAACGTGACTCCGCACC...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTTCTGCCGCAGTGGAGTaGAGCTCAACCTCGAGGACA +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVSAAVE*SSTSRT
Trigger: TGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGA...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp AGTGGTATGATCACAGTTCACTGTAACGTGGAGCTTCCGGGCTCAAATGATCCTATGCAGAGGGGAGTTTaGGTTCCAAAGTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: SGMITVHCNVELPGSNDPMQRGV*VPKYFS
Trigger: AGAGAAATACTTTGGAACTCAAACTCCCCTCTGCAT...AGGATCATTTGAGCCCGGAAGCTCCACGTTACAGTGAACTGTGATCATACCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR GCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGTCAGGGCTGGCTGGCTaGTTCTTCCGACCACTGCGT +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWSGLAG*FFRPLR
Trigger: ACGCAGTGGTCGGAAGAAGCAGCCAGCCAGCCCTGA...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTCTGAGGCGACCTTCATaGGCTGAGCTGGACGCCTTA +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVLRRPS*AELDAL
Trigger: TAAGGCGTCCAGCTCAGCGCATGAAGGTCGCCTCAG...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTATGTGGGGGTGTCCATaGAGCCACTGCTGCTCCATG +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVMWGCP*SHCCSM
Trigger: CATGGAGCAGCAGTGGCTGCATGGACACCCCCACAT...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGAAGCATGCTTTCTGAATaGACTGTGGGTGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRSMLSE*TVGGTP
Trigger: TGGAGTCCCACCCACAGTGCATTCAGAAAGCATGCT...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTATCAGCATCTCTTCCTaGTCCCTCTGCGGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVISISS*SLCGLG
Trigger: ACCCAGGCCGCAGAGGGAGCAGGAAGAGATGCTGAT...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCCAGAATTATATCAAATaGCCACAATTCCTTTCTCAG +
Preference number: 4 (lower is better)
Translates to: IALGFQIPMPPICKPRGLQNYIK*PQFLSQ
Trigger: CTGAGAAAGGAATTGTGGCCATTTGATATAATTCTG...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337907.7
CDS-3UTR CCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGGGGGCACAGCAGCAATaGTGGTTGGTGGTGGCTCGA +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWGAQQQ*WLVVAR
Trigger: TCGAGCCACCACCAACCACCATTGCTGCTGTGCCCC...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGGGGGGTGCCGAAAACTaGGTGGCGAAGCATCTCGTG +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWGGAEN*VAKHLV
Trigger: CACGAGATGCTTCGCCACCCAGTTTTCGGCACCCCC...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCCGTCCCTGCAAACCCTaGATGCTCGCTGCTGTGACC +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFRPCKP*MLAAVT
Trigger: GGTCACAGCAGCGAGCATCCAGGGTTTGCAGGGACG...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATTCCCTTGCTCAAAAGTaGCCTCAATCTGTGGCAAGA +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNSLAQK*PQSVAR
Trigger: TCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGA...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGGTTACGGCTGCAGCCTaGAAACGAGGGCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWVTAAA*KRGQAL
Trigger: GAGAGCCTGCCCTCGTTTCCAGGCTGCAGCCGTAAC...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCCTGTCCTACAATTCTTaGGATGGGACCAGCACAATG +
Preference number: 4 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCLSYNS*DGTSTM
Trigger: CATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAG...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTCTGGTGAGTCTAGCTaGATTCCTGAACCTTTACTT +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYSGESS*IPEPLL
Trigger: AAGTAAAGGTTCAGGAATCCAGCTAGACTCACCAGA...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377464.5
CDS-3UTR TCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTGTTGTGACCCGGTGCTaGGCGCACATACAGTTACTC +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVVVTRC*AHIQLL
Trigger: GAGTAACTGTATGTGCGCTCAGCACCGGGTCACAAC...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337907.7
CDS-3UTR TCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCGCTCCGGCGTGGCCTTaGATTCTCACTCTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFAPAWP*ILTLSC
Trigger: GCAAGAGAGAGTGAGAATTCAAGGCCACGCCGGAGC...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR TCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGTCTGCCGCAGTGGAGTaGAGCTCAACCTCGAGGACA +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWSAAVE*SSTSRT
Trigger: TGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGA...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCGTGGATACGCTCGGCTaGCAGTCTGTCAGGGTAGCT +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFVDTLG*QSVRVA
Trigger: AGCTACCCTGACAGACTGGCAGCCGAGCGTATCCAC...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCGTCACGTTGAACATCTaGAGTCGGGCCAGGGGATCG +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFVTLNI*SRARGS
Trigger: CGATCCCCTGGCCCGACTGCAGATGTTCAACGTGAC...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATAGACGTAAAAAGCCATaGTGCAGAACTTTCTCCAAT +
Preference number: 4 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYRRKKP*CRTFSN
Trigger: ATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCT...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTAAAGTGCGTTACGGCTaGAGCCTGGAAACGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVKVRYG*SLETRA
Trigger: TGCCCTCGTTTCCAGGCTGCAGCCGTAACGCACTTT...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATATACACACAGTCTCCTaGTCTGTAGACCACATCATC +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNIHTVS*SVDHII
Trigger: GATGATGTGGTCTACAGACCAGGAGACTGTGTGTAT...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp CGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGGAAACTAAATGGTTGCAGATCTaGAAGTTTGGCCTGATGACT +
Preference number: 4 (lower is better)
Translates to: RPNAKVLKICPTSQTRETKWLQI*KFGLMT
Trigger: AGTCATCAGGCCAAACTTCCAGATCTGCAACCATTT...AGTTTCCCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CCA 90 bp ATTCATCCAGAACAATCAAGTGTGTGTACACAGAAATCTAGAAGGAAATCTACATTCTCCCGGCCTCCGTaGTGCCAATCTTTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: IHPEQSSVCTQKSRRKSTFSRPP*CQSLEV
Trigger: CACCTCCAAAGATTGGCACCACGGAGGCCGGGAGAA...TGTAGATTTCCTTCTAGATTTCTGTGTACACACACTTGATTGTTCTGGATGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGACCGTATTTCTTGAAGTaGATGCGACAGTCGGTGCAA +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRPYFLK*MRQSVQ
Trigger: TTGCACCGACTGTCGCATCCACTTCAAGAAATACGG...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCGTGCCGAAAACTGGGTaGCGAAGCATCTCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFVPKTG*RSISCS
Trigger: CGAGCACGAGATGCTTCGCCACCCAGTTTTCGGCAC...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGATCTAACACATCCCTTTaGCAGGCATATGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRSNTSL*QAYVLG
Trigger: ACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGA...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGACTACAATTCTTGGGATaGGACCAGCACAATGGCAGA +
Preference number: 4 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRLQFLG*DQHNGR
Trigger: TCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGGTTTTTAAGAGAAACTaGAAATGTCGCTATTTGACG +
Preference number: 4 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLVFKRN*KCRYLT
Trigger: CGTCAAATAGCGACATTTCCAGTTTCTCTTAAAAAC...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ATTCATCCAGAACAATCAAGTGTGTGTACACAGAAATCTAGAAGGAAATCTACACTGCCTCTGCCGCAGTaGAGTGAAGCTCAACCTCGA +
Preference number: 4 (lower is better)
Translates to: IHPEQSSVCTQKSRRKSTLPLPQ*SEAQPR
Trigger: TCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAG...TGTAGATTTCCTTCTAGATTTCTGTGTACACACACTTGATTGTTCTGGATGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ATTCGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGGAAAATACAACATGGGACTaGGTTCCTCATTTGACTCGG +
Preference number: 4 (lower is better)
Translates to: IRPNAKVLKICPTSQTRENTTWD*VPHLTR
Trigger: CCGAGTCAAATGAGGAACCCAGTCCCATGTTGTATT...TTCCCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR TCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCGTCTTCATTGATGGGTaGGGTGCGACCATCAGGGCT +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFVFIDG*GATIRA
Trigger: AGCCCTGATGGTCGCACCTCACCCATCAATGAAGAC...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTAGCGGATGTCTTCATTaGTGGGTGAGGTGCGACCAT +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVSGCLH*WVRCDH
Trigger: ATGGTCGCACCTCACCCATCAATGAAGACATCCGCT...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGTGCTACCCTCATCGTTaGCGCTGCGACTGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWCYPHR*RCDCLN
Trigger: GTTCAGACAGTCGCAGCGTCAACGATGAGGGTAGCA...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTCGCCATGCTCCTTGCTaGCCTCAAGTACATAAGGAG +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVRHAPC*PQVHKE
Trigger: CTCCTTATGTACTTGAGGGCAGCAAGGAGCATGGCG...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCTACCCCTTCAGCTCCTaGTCACTGTCCTCACTGTCG +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFYPFSS*SLSSLS
Trigger: CGACAGTGAGGACAGTGAGCAGGAGCTGAAGGGGTA...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTCTGCTTTACTGTCATTaGTGGAGGTACTGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVLLYCH*WRYWQR
Trigger: GCGCTGCCAGTACCTCCAGCAATGACAGTAAAGCAG...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp AGAATTCGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGAAAGTTCTTAAGATCTaGCCCACTTCCCAAACAAGG +
Preference number: 4 (lower is better)
Translates to: RIRPNAKVLKICPTSQTRKVLKI*PTSQTR
Trigger: CCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTT...CCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCGAATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCAGCAGCAATGGTGGTTaGTGGTGGCTCGAAGGATGG +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFSSNGG*WWLEGW
Trigger: CCATCCTTCGAGCCACCACCAACCACCATTGCTGCT...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTGGCAGGCATATGTCCTaGGTCACTTGTGTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVGRHMS*VTCVLS
Trigger: ACTCAGCACACAAGTGACCCAGGACATATGCCTGCC...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
3UTR CAA 72 bp AACACGGTTTTTAAGAGAAACTGGAAATGTCGCTATTaGACGCCAGAACCTGAATTTGAGCCAGTAGCTGCT +
Preference number: 4 (lower is better)
Translates to: NTVFKRNWKCRY*TPEPEFEPVAA
Trigger: AGCAGCTACTGGCTCAAATTCAGGTTCTGGCGTCAAATAGCGACATTTCCAGTTTCTCTTAAAAACCGTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGATTCTAGCACCTACTaGGAAATCAAGGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYDSSTY*EIKEKK
Trigger: TTTCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATC...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR TCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCACACAGCATGCTTTCTaGATGCACTGTGGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFTQHAF*MHCGWD
Trigger: GTCCCACCCACAGTGCATTCAGAAAGCATGCTGTGT...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp ACTAATAGCTCATTTACATACACAGCTGGATACAATGGGCTGCATGCAGAGGGGCTCGTTTGTGATATTTaGGATGCTATGAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: TNSSFTYTAGYNGLHAEGLVCDI*DAMKEK
Trigger: TTTCTCCTTCATAGCATCTCAAATATCACAAACGAG...CCCCTCTGCATGCAGCCCATTGTATCCAGCTGTGTATGTAAATGAGCTATTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR TCA 90 bp AAGCCAAACCTCAGTCATAATGCAGATCCCTGTCTAACAGGTGATCATTGTTTTGGTAATACGGGAGCATaGACACAGCTGTGTGTAAAT +
Preference number: 4 (lower is better)
Translates to: KPNLSHNADPCLTGDHCFGNTGA*TQLCVN
Trigger: ATTTACACACAGCTGTGTTCATGCTCCCGTATTACC...AAAACAATGATCACCTGTTAGACAGGGATCTGCATTATGACTGAGGTTTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR TCA 90 bp CGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGGAAACTTTCCTGCTCAGTCTTTaGAATCAGTGTGTATTTTAC +
Preference number: 4 (lower is better)
Translates to: RPNAKVLKICPTSQTRETFLLSL*NQCVFY
Trigger: GTAAAATACACACTGATTTCAAAGACTGAGCAGGAA...AGTTTCCCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR GCA 90 bp TATTTGAGATGCTATGAAGGAGAAACCTCAACAAGTGCTGTTAGATTTCACTTTCGCCATGCTCCTTGCTaGCCTCAAGTACATAAGGAG +
Preference number: 4 (lower is better)
Translates to: YLRCYEGETSTSAVRFHFRHAPC*PQVHKE
Trigger: CTCCTTATGTACTTGAGGGCAGCAAGGAGCATGGCG...AAAGTGAAATCTAACAGCACTTGTTGAGGTTTCTCCTTCATAGCATCTCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR GCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCACACATTCCTGCAAATaGCGCCATGCTCCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFTHSCK*RHAPCC
Trigger: GCAGCAAGGAGCATGGCGGCATTTGCAGGAATGTGT...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTGCCAAACCCCAAGATTaGAGGGAAGCTTTCTGGATG +
Preference number: 4 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVAKPQD*REAFWM
Trigger: CATCCAGAAAGCTTCCCTGCAATCTTGGGGTTTGGC...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR GCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCAGCCCCCACACAGCATaGTTTCTGAATGCACTGTGG +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFSPHTA*FLNALW
Trigger: CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCT...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCACACGAATCTCCCCCTaGGTACTGTTCAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFTRISP*VLFSLL
Trigger: AAGGAGGCTGAACAGTACCCAGGGGGAGATTCGTGT...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGCTTTACTGTCATTGCTaGAGGTACTGGCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWLYCHC*RYWQRW
Trigger: CCAGCGCTGCCAGTACCTCCAGCAATGACAGTAAAG...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGCCTGGTCGATGTCTTTaGGGTCACTGCTACCCTCAT +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWPGRCL*GHCYPH
Trigger: ATGAGGGTAGCAGTGACCCCAAAGACATCGACCAGG...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGGTGCTGCGATTGTCCTaGTCGATGTCTTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWVLRLS*SMSLGS
Trigger: TGACCCCAAAGACATCGACCAGGACAATCGCAGCAC...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATTCATCCAGAACAATCAAGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAGGCAGGCATATGTCCTaGGTCACTTGTGTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: IHPEQSSVCTQKSRRKSTGRHMS*VTCVLS
Trigger: ACTCAGCACACAAGTGACCCAGGACATATGCCTGCC...TGTAGATTTCCTTCTAGATTTCTGTGTACACACACTTGATTGTTCTGGATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR TCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGAGGAGCAGACACAAGTaGAACGCCAGGCAGAAAACA +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWRSRHK*NARQKT
Trigger: TGTTTTCTGCCTGGCGTTTCACTTGTGTCTGCTCCT...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR TCA 90 bp TATTTGAGATGCTATGAAGGAGAAACCTCAACAAGTGCTGTTAGATTTCACTTTACAATAGCGCTCCCATaGTACCTCACTCTTGCTGAC +
Preference number: 4 (lower is better)
Translates to: YLRCYEGETSTSAVRFHFTIALP*YLTLAD
Trigger: GTCAGCAAGAGTGAGGTATCATGGGAGCGCTATTGT...AAAGTGAAATCTAACAGCACTTGTTGAGGTTTCTCCTTCATAGCATCTCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR TCA 90 bp AAGCCAAACCTCAGTCATAATGCAGATCCCTGTCTAACAGGTGATCATTGTTTTGAGGAAGCATTTCAATaGCAAAAGCCAAACCTCAGT +
Preference number: 4 (lower is better)
Translates to: KPNLSHNADPCLTGDHCFEEAFQ*QKPNLS
Trigger: ACTGAGGTTTGGCTTTTGTCATTGAAATGCTTCCTC...AAAACAATGATCACCTGTTAGACAGGGATCTGCATTATGACTGAGGTTTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR GCA 90 bp ATTCATCCAGAACAATCAAGTGTGTGTACACAGAAATCTAGAAGGAAATCTACATCCATCACACATTCCTaGAAATGCCGCCATGCTCCT +
Preference number: 4 (lower is better)
Translates to: IHPEQSSVCTQKSRRKSTSITHS*KCRHAP
Trigger: AGGAGCATGGCGGCATTTGCAGGAATGTGTGATGGA...TGTAGATTTCCTTCTAGATTTCTGTGTACACACACTTGATTGTTCTGGATGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCGATTCCAAATTCCTATaGCCCCGATCTGCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFDSKFL*PRSASL
Trigger: GAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATTCTTCTTTGGAAAAATaGATGCCAAAGGAGGAGATA +
Preference number: 4 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNSSLEK*MPKEEI
Trigger: TATCTCCTCCTTTGGCATCCATTTTTCCAAAGAAGA...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCTCTTCTTTGGAAAAATaGATGCCAAAGGAGGAGATA +
Preference number: 4 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCSSLEK*MPKEEI
Trigger: TATCTCCTCCTTTGGCATCCATTTTTCCAAAGAAGA...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CCA 90 bp AAGCCAAACCTCAGTCATAATGCAGATCCCTGTCTAACAGGTGATCATTGTTTTATTTACATACACAGCTaGATACAATGGGCTGCATGC +
Preference number: 4 (lower is better)
Translates to: KPNLSHNADPCLTGDHCFIYIHS*IQWAAC
Trigger: GCATGCAGCCCATTGTATCCAGCTGTGTATGTAAAT...AAAACAATGATCACCTGTTAGACAGGGATCTGCATTATGACTGAGGTTTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR TCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGAAAATGGAAGAGGTCTaGTGGAGCAGATGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWKMEEV*WSRCLC
Trigger: GCACAGACATCTGCTCCATCAGACCTCTTCCATTTT...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AAGCCAAACCTCAGTCATAATGCAGATCCCTGTCTAACAGGTGATCATTGTTTTTCGGTTCTTGATAACTaGGTCTGTAATGACAAGTTC +
Preference number: 4 (lower is better)
Translates to: KPNLSHNADPCLTGDHCFSVLDN*VCNDKF
Trigger: GAACTTGTCATTACAGACCCAGTTATCAAGAACCGA...AAAACAATGATCACCTGTTAGACAGGGATCTGCATTATGACTGAGGTTTGGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCGTGAAGGGTGTGAACTaGATTCTAGCACCTACTGAG +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFVKGVN*ILAPTE
Trigger: CTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCAC...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGACTCCCTGTGCAAAATaGAAGAGGTCTGATGGAGCA +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWTPCAK*KRSDGA
Trigger: TGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGT...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGTCCCTTGCTCAAAAGTaGCCTCAATCTGTGGCAAGA +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWSLAQK*PQSVAR
Trigger: TCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGA...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR TCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCGGAAATGTCGCTATTTaGCGCCAGAACCTGAATTTG +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFGNVAI*RQNLNL
Trigger: CAAATTCAGGTTCTGGCGTCAAATAGCGACATTTCC...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR GCA 90 bp TATTTGAGATGCTATGAAGGAGAAACCTCAACAAGTGCTGTTAGATTTCACTTTATGCAGTGTGTTCAGTaGATTCAGAGTGGTGTCATC +
Preference number: 4 (lower is better)
Translates to: YLRCYEGETSTSAVRFHFMQCVQ*IQSGVI
Trigger: GATGACACCACTCTGAATGCACTGAACACACTGCAT...AAAGTGAAATCTAACAGCACTTGTTGAGGTTTCTCCTTCATAGCATCTCAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CCA 90 bp TATTTGAGATGCTATGAAGGAGAAACCTCAACAAGTGCTGTTAGATTTCACTTTACCAGTTCCTCATGTTaGGTCACTGTATCACCATCT +
Preference number: 4 (lower is better)
Translates to: YLRCYEGETSTSAVRFHFTSSSC*VTVSPS
Trigger: AGATGGTGATACAGTGACCCAACATGAGGAACTGGT...AAAGTGAAATCTAACAGCACTTGTTGAGGTTTCTCCTTCATAGCATCTCAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCCGAAGTCATCTTCACTaGCTGAACTTAGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFRSHLH*LNLGPR
Trigger: TCTTGGACCTAAGTTCAGCCAGTGAAGATGACTTCG...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGCGAAGTCATCTTCACTaGCTGAACTTAGGTCCAAGA +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWRSHLH*LNLGPR
Trigger: TCTTGGACCTAAGTTCAGCCAGTGAAGATGACTTCG...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCAAATGGTTGCAGATCTaGAAGTTTGGCCTGATGACT +
Preference number: 4 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFKWLQI*KFGLMT
Trigger: AGTCATCAGGCCAAACTTCCAGATCTGCAACCATTT...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR GCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGCGTAAAAAGCCATGCTaGAGAACTTTCTCCAATTAT +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWRKKPC*RTFSNY
Trigger: ATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACG...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CCA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGTCTTCTTTGGAAAAATaGATGCCAAAGGAGGAGATA +
Preference number: 4 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWSSLEK*MPKEEI
Trigger: TATCTCCTCCTTTGGCATCCATTTTTCCAAAGAAGA...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS CCA 90 bp CCCGCTATGCTGCCTCCTGAAGCCGCCGCACCAGAGCAGGGTGGCTaGGCCGAGGTGCCAGGTCCCGCCGGTGGGGTAGAGGTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: PAMLPPEAAAPEQGG*AEVPGPAGGVEVEG
Trigger: CCCCTCCACCTCTACCCCACCGGCGGGACCTGGCACCTCGGCCCAGCCACCCTGCTCTGGTGCGGCGGCTTCAGGAGGCAGCATAGCGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS CCA 90 bp GGCGGCCGCTGGGGGTGCAAGGCCGGTGCCTGTTGGATGTGGGTGTaGGGAACAGGCGCTGTGGGAGCCTGTGGCTGGTTAGGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: GGRWGCKAGACWMWV*GTGAVGACGWLGAW
Trigger: CCAGGCCCCTAACCAGCCACAGGCTCCCACAGCGCCTGTTCCCCACACCCACATCCAACAGGCACCGGCCTTGCACCCCCAGCGGCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS CCA 90 bp CCCGCTCTCGGATCTCCCGCTCCCGGAGCTCCCGCTCGCGGATGGTaGGGTCGACGTTGTAGAGGCCAGGCATGTGGTAGGCCAGCAGGG +
Preference number: 5 (lower is better)
Translates to: PALGSPAPGAPARGW*GRRCRGQACGRPAG
Trigger: CCCTGCTGGCCTACCACATGCCTGGCCTCTACAACGTCGACCCCACCATCCGCGAGCGGGAGCTCCGGGAGCGGGAGATCCGAGAGCGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS CCA 90 bp GGAGGCAGGTTGGCATTCATGGAGAAGGGTGAGGGCCCCGAGAGGTaGGGAGGGTGCTTGTGGGCCTGTGGCGCCGGCAGCTGGGGGATG +
Preference number: 5 (lower is better)
Translates to: GGRLAFMEKGEGPER*GGCLWACGAGSWGM
Trigger: CATCCCCCAGCTGCCGGCGCCACAGGCCCACAAGCACCCTCCCCACCTCTCGGGGCCCTCACCCTTCTCCATGAATGCCAACCTGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGAGGTGGGGAGGGTGCTaGTGGGCCTGTGGCGCCGGC +
Preference number: 5 (lower is better)
Translates to: YAPDLQASWALEHSWRSVRWGGC*WACGAG
Trigger: GCCGGCGCCACAGGCCCACAAGCACCCTCCCCACCT...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTAGGTGGGGAGGGTGCTaGTGGGCCTGTGGCGCCGGC +
Preference number: 5 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSRWGGC*WACGAG
Trigger: GCCGGCGCCACAGGCCCACAAGCACCCTCCCCACCT...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS TCA 90 bp TGGTGGCAGGGGCTGCTCCCGTGGAGGCTGTTGGGACTGCAGCGCTaGCTGAGAGGCTGGCAGCTGCAGGGAGGTGTGAGGGTACGCTGC +
Preference number: 5 (lower is better)
Translates to: WWQGLLPWRLLGLQR*LRGWQLQGGVRVRC
Trigger: GCAGCGTACCCTCACACCTCCCTGCAGCTGCCAGCCTCTCAGTCAGCGCTGCAGTCCCAACAGCCTCCACGGGAGCAGCCCCTGCCACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS CCA 90 bp TCTCCCGCTCTCGGATCTCCCGCTCCCGGAGCTCCCGCTCGCGGATaGTGGGGTCGACGTTGTAGAGGCCAGGCATGTGGTAGGCCAGCA +
Preference number: 5 (lower is better)
Translates to: SPALGSPAPGAPARG*WGRRCRGQACGRPA
Trigger: TGCTGGCCTACCACATGCCTGGCCTCTACAACGTCGACCCCACCATCCGCGAGCGGGAGCTCCGGGAGCGGGAGATCCGAGAGCGGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS GCA 90 bp ACGGGTGTGGACGCGGTGCGAGTCTTAATCCTCCTGAACACGGCCTaGCTGCGGTGCCTACGATGGGCTCGGGAGCTGGCTGCTTCGGGG +
Preference number: 5 (lower is better)
Translates to: TGVDAVRVLILLNTA*LRCLRWARELAASG
Trigger: CCCCGAAGCAGCCAGCTCCCGAGCCCATCGTAGGCACCGCAGGCAGGCCGTGTTCAGGAGGATTAAGACTCGCACCGCGTCCACACCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS GCA 90 bp ATGTGGCCAGGACCACTGAGCTGTGGGTCACTGAGGCGACCTTCATaGGCTGAGCTGGACGCCTTAGCCGCCCGCTCTGCCTCGCGCTCC +
Preference number: 5 (lower is better)
Translates to: MWPGPLSCGSLRRPS*AELDALAARSASRS
Trigger: GGAGCGCGAGGCAGAGCGGGCGGCTAAGGCGTCCAGCTCAGCGCATGAAGGTCGCCTCAGTGACCCACAGCTCAGTGGTCCTGGCCACAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS GCA 90 bp ATCGCTGGTCAGCGATGCCATGCGCTCTGCGTGGATACGCTCGGCTaGCAGTCTGTCAGGGTAGCTCATCTCGGGCCGCAGCTGGGGGCC +
Preference number: 5 (lower is better)
Translates to: IAGQRCHALCVDTLG*QSVRVAHLGPQLGA
Trigger: GGCCCCCAGCTGCGGCCCGAGATGAGCTACCCTGACAGACTGGCAGCCGAGCGTATCCACGCAGAGCGCATGGCATCGCTGACCAGCGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp CCTGGCCTCCTGAGAAGCAGCCCCCACACAGCATGCTTTCTGAATGCACTGTGGAGGTGGGGAGGGTGCTaGTGGGCCTGTGGCGCCGGC +
Preference number: 5 (lower is better)
Translates to: PGLLRSSPHTACFLNALWRWGGC*WACGAG
Trigger: GCCGGCGCCACAGGCCCACAAGCACCCTCCCCACCT...CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCTGCTTCTCAGGAGGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS TCA 90 bp TGGCAGCGCTGGGGGAGTTCCGGCCGCTGGAGCGGATGTCTTCATTaGTGGGTGAGGTGCGACCATCAGGGCTGGCTGGCTGCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: WQRWGSSGRWSGCLH*WVRCDHQGWLAASS
Trigger: GGAAGAAGCAGCCAGCCAGCCCTGATGGTCGCACCTCACCCATCAATGAAGACATCCGCTCCAGCGGCCGGAACTCCCCCAGCGCTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000505225.1
ENST00000656437.1
CDS GCA 90 bp GACGCGGTGCGAGTCTTAATCCTCCTGAACACGGCCTGCCTGCGGTaGCTACGATGGGCTCGGGAGCTGGCTGCTTCGGGGGTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: DAVRVLILLNTACLR*LRWARELAASGVFF
Trigger: GAAGAAGACCCCCGAAGCAGCCAGCTCCCGAGCCCATCGTAGGCACCGCAGGCAGGCCGTGTTCAGGAGGATTAAGACTCGCACCGCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000460659.5
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS GCA 90 bp CTGCAGTCGGGCCAGGGGATCGCTGGTCAGCGATGCCATGCGCTCTaGGTGGATACGCTCGGCTGCCAGTCTGTCAGGGTAGCTCATCTC +
Preference number: 5 (lower is better)
Translates to: LQSGQGIAGQRCHAL*VDTLGCQSVRVAHL
Trigger: GAGATGAGCTACCCTGACAGACTGGCAGCCGAGCGTATCCACGCAGAGCGCATGGCATCGCTGACCAGCGATCCCCTGGCCCGACTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS GCA 90 bp CTTGGTAGGTGGCCACCATGCATGTGGGGGTGTCCATGCAGCCACTaGTGCTCCATGGCCAGTCTCTGCAGCTCGGCCGACTGGGCATGC +
Preference number: 5 (lower is better)
Translates to: LGRWPPCMWGCPCSH*CSMASLCSSADWAC
Trigger: GCATGCCCAGTCGGCCGAGCTGCAGAGACTGGCCATGGAGCAGCAGTGGCTGCATGGACACCCCCACATGCATGGTGGCCACCTACCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGGGTCTGGAGGGTGTGTaGACGGGTGTGGACGCGGTG +
Preference number: 5 (lower is better)
Translates to: NSYAPDLQASWALEHSWRGLEGV*TGVDAV
Trigger: CACCGCGTCCACACCCGTCAACACACCCTCCAGACC...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp CCTCTGCGGCCTGGGTCCTGGATGGACTTTGTGTCCGCCGACCCAGTGTGGTCTTGCTCAGCCTCGCGCTaGGCCTTCTCAATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PLRPGSWMDFVSADPVWSCSASR*AFSMAS
Trigger: GGAGGCCATTGAGAAGGCCAAGCGCGAGGCTGAGCA...AGACCACACTGGGTCGGCGGACACAAAGTCCATCCAGGACCCAGGCCGCAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS TCA 90 bp GCTGGGGGAGTTCCGGCCGCTGGAGCGGATGTCTTCATTGATGGGTaGGGTGCGACCATCAGGGCTGGCTGGCTGCTTCTTCCGACCACT +
Preference number: 5 (lower is better)
Translates to: AGGVPAAGADVFIDG*GATIRAGWLLLPTT
Trigger: AGTGGTCGGAAGAAGCAGCCAGCCAGCCCTGATGGTCGCACCTCACCCATCAATGAAGACATCCGCTCCAGCGGCCGGAACTCCCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000505225.1
ENST00000656437.1
CDS GCA 90 bp CACGTTGAACATCTGCAGTCGGGCCAGGGGATCGCTGGTCAGCGATaGCATGCGCTCTGCGTGGATACGCTCGGCTGCCAGTCTGTCAGG +
Preference number: 5 (lower is better)
Translates to: HVEHLQSGQGIAGQR*HALCVDTLGCQSVR
Trigger: CCTGACAGACTGGCAGCCGAGCGTATCCACGCAGAGCGCATGGCATCGCTGACCAGCGATCCCCTGGCCCGACTGCAGATGTTCAACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCCGAGTCACTCTCATaGTCCTGGGGGCTGGGGATG +
Preference number: 5 (lower is better)
Translates to: YAPDLQASWALEHSWRSVSESLS*SWGLGM
Trigger: CATCCCCAGCCCCCAGGACAATGAGAGTGACTCGGA...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAAGGGGTGGTTGCGGTaGGTGGGCGACATGACGTGG +
Preference number: 5 (lower is better)
Translates to: NSYAPDLQASWALEHSWRKGWLR*VGDMTW
Trigger: CCACGTCATGTCGCCCACCAACCGCAACCACCCCTT...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS TCA 90 bp GGCCCCATCCTCCTGCCTGGCGCTGCCACGGACAGCCATTCTGCATaGCTGAAGCTTCTGCTTTCCCTGAGCAGCAGGGAGGTCACACAC +
Preference number: 5 (lower is better)
Translates to: GPILLPGAATDSHSA*LKLLLSLSSREVTH
Trigger: GTGTGTGACCTCCCTGCTGCTCAGGGAAAGCAGAAGCTTCAGTCATGCAGAATGGCTGTCCGTGGCAGCGCCAGGCAGGAGGATGGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS GCA 90 bp CACACTGAGACGCCGGTGGCCCGATGCCCCAGAGCACAAGGCAAATaGTGGTTCCTGCTCACCACTTCGTCCTCGGTCCAGCACTTCTCG +
Preference number: 5 (lower is better)
Translates to: HTETPVARCPRAQGK*WFLLTTSSSVQHFS
Trigger: CGAGAAGTGCTGGACCGAGGACGAAGTGGTGAGCAGGAACCAGCATTTGCCTTGTGCTCTGGGGCATCGGGCCACCGGCGTCTCAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS GCA 90 bp GAAGGGCCCCATCCTCCTGCCTGGCGCTGCCACGGACAGCCATTCTaGATGACTGAAGCTTCTGCTTTCCCTGAGCAGCAGGGAGGTCAC +
Preference number: 5 (lower is better)
Translates to: EGPHPPAWRCHGQPF*MTEASAFPEQQGGH
Trigger: GTGACCTCCCTGCTGCTCAGGGAAAGCAGAAGCTTCAGTCATGCAGAATGGCTGTCCGTGGCAGCGCCAGGCAGGAGGATGGGGCCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS-3UTR CAA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGGTAGGCGGGGGCTaGATGTGGGGCATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: SGALVAECVSVSARTVKGVVGGG*MWGMAK
Trigger: CTTGGCCATGCCCCACATCAAGCCCCCGCCTACCAC...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGTCCAGAGCCTCCTCCTaGATCTGGACGGTGGGGAGT +
Preference number: 5 (lower is better)
Translates to: NSYAPDLQASWALEHSWRSRASS*IWTVGS
Trigger: ACTCCCCACCGTCCAGATCAAGGAGGAGGCTCTGGA...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGCCTCCTCCCTCTTCTaGGCCAGCTTGGACCCGGCC +
Preference number: 5 (lower is better)
Translates to: DSKFLCPRSASLVGSGALASSLF*ASLDPA
Trigger: GGCCGGGTCCAAGCTGGCCAAGAAGAGGGAGGAGGC...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS TCA 90 bp GCTGGTTCCTGCTCACCACTTCGTCCTCGGTCCAGCACTTCTCGATaGGCTTGGGCACAGGCTTCTTCACCAGGCGCTGCAGGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: AGSCSPLRPRSSTSR*AWAQASSPGAAGLC
Trigger: GCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGACCGAGGACGAAGTGGTGAGCAGGAACCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS GCA 90 bp CCCAGGGGACTCACCGAGCCCCGACTCCGCCGTGTCCTCATGCTATaGTTCCCACTGAGCCCATCATCCTCTTCCTTGACGGGTTTGAAC +
Preference number: 5 (lower is better)
Translates to: PRGLTEPRLRRVLML*FPLSPSSSSLTGLN
Trigger: GTTCAAACCCGTCAAGGAAGAGGATGATGGGCTCAGTGGGAAGCATAGCATGAGGACACGGCGGAGTCGGGGCTCGGTGAGTCCCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464367.1
CDS CCA 90 bp ACAGCAGCAATGGTGGTTGGTGGTGGCTCGAAGGATGGCCGCATGTaGCCAGGACCACTGAGCTGTGGGTCACTGAGGCGACCTTCATGC +
Preference number: 5 (lower is better)
Translates to: TAAMVVGGGSKDGRM*PGPLSCGSLRRPSC
Trigger: GCATGAAGGTCGCCTCAGTGACCCACAGCTCAGTGGTCCTGGCCACATGCGGCCATCCTTCGAGCCACCACCAACCACCATTGCTGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCGACCTTTCCTGCGACTaGAACCTAGGCTCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTDLSCD*NLGSLL
Trigger: GAGGAGGGAGCCTAGGTTCAAGTCGCAGGAAAGGTC...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR CAA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCCCGTGGTGCCAATCTTaGGAGGTGGTGGTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTPWCQS*EVVVKQ
Trigger: CTGCTTCACCACCACCTCCAAAGATTGGCACCACGG...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCCTCCTCCCTCTTCTaGGCCAGCTTGGACCCGGCC +
Preference number: 5 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGASSLF*ASLDPA
Trigger: GGCCGGGTCCAAGCTGGCCAAGAAGAGGGAGGAGGC...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTAAGGGGTGGTTGCGGTaGGTGGGCGACATGACGTGG +
Preference number: 5 (lower is better)
Translates to: SGALVAECVSVSARTVKGKGWLR*VGDMTW
Trigger: CCACGTCATGTCGCCCACCAACCGCAACCACCCCTT...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GGCAGGAAGCAGGGCCGACAGAGGGCAGACACCCCAGAACACCCGCCCTCAGCCATGTGGAACGCCCCTTaGCTCCCTTTAATTAAAGGG +
Preference number: 5 (lower is better)
Translates to: GRKQGRQRADTPEHPPSAMWNAP*LPLIKG
Trigger: CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACAT...GGCTGAGGGCGGGTGTTCTGGGGTGTCTGCCCTCTGTCGGCCCTGCTTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS TCA 90 bp GCGGGTCCACGGGCTTCTCAATGGGCGGGAGCTCACCGTATTTCTTaGAGTGGATGCGACAGTCGGTGCAAAGCAGGATGTTCTCCCGGC +
Preference number: 5 (lower is better)
Translates to: AGPRASQWAGAHRIS*SGCDSRCKAGCSPG
Trigger: GCCGGGAGAACATCCTGCTTTGCACCGACTGTCGCATCCACTTCAAGAAATACGGTGAGCTCCCGCCCATTGAGAAGCCCGTGGACCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000464367.1
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS TCA 90 bp GGTGGGAGTGAATGTGAGAGTGCTGGTGATGGTGCGGAGTCACGTTaGACATCTGCAGTCGGGCCAGGGGATCGCTGGTCAGCGATGCCA +
Preference number: 5 (lower is better)
Translates to: GGSECESAGDGAESR*TSAVGPGDRWSAMP
Trigger: TGGCATCGCTGACCAGCGATCCCCTGGCCCGACTGCAGATGTTCAACGTGACTCCGCACCATCACCAGCACTCTCACATTCACTCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS TCA 90 bp CAGCCAGATCTCACTCCACTTCGTCCTCGGTCCAGCACTTCTCGATaGGCTTGGGCACAGGCTTCTTCACCAGGCGCTGCAGGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: QPDLTPLRPRSSTSR*AWAQASSPGAAGLC
Trigger: GCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGACCGAGGACGAAGTGGAGTGAGATCTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS GCA 90 bp GTTTGCTGGTTTTTCTGGCTTGTGGCTGGCCATGCCACACACAGCTaGACCTGCTCTGCGGCTTTGCTTCCCAGTGAGGCGGAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: VCWFFWLVAGHATHS*TCSAALLPSEAEAG
Trigger: ACCTGCCTCCGCCTCACTGGGAAGCAAAGCCGCAGAGCAGGTGCAGCTGTGTGTGGCATGGCCAGCCACAAGCCAGAAAAACCAGCAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CCA 90 bp CCTTCTTGGCCGACTTCTTCACTGTCTCTGCTTTACTGTCATTGCTaGAGGTACTGGCAGCGCTGGGGGAGTTCCGGCCGCTGGAGCGGA +
Preference number: 5 (lower is better)
Translates to: PSWPTSSLSLLYCHC*RYWQRWGSSGRWSG
Trigger: TCCGCTCCAGCGGCCGGAACTCCCCCAGCGCTGCCAGTACCTCCAGCAATGACAGTAAAGCAGAGACAGTGAAGAAGTCGGCCAAGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000505225.1
ENST00000656437.1
CDS-3UTR CAA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGGAGCGGATGTCTTCATaGATGGGTGAGGTGCGACCA +
Preference number: 5 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQERMSS*MGEVRP
Trigger: TGGTCGCACCTCACCCATCAATGAAGACATCCGCTC...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTCCTTCAGATGGCGAGTaGGGCCTGCTGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SGALVAECVSVSARTVKGPSDGE*GLLISC
Trigger: GCAGGAGATCAGCAGGCCCAACTCGCCATCTGAAGG...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGTCCTGGTCGATGTCTTaGGGGTCACTGCTACCCTCA +
Preference number: 5 (lower is better)
Translates to: NSYAPDLQASWALEHSWRSWSMS*GSLLPS
Trigger: TGAGGGTAGCAGTGACCCCAAAGACATCGACCAGGA...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGTCCTGGTCGATGTCTTaGGGGTCACTGCTACCCTCA +
Preference number: 5 (lower is better)
Translates to: VGSGALVAECVSVSARTVSWSMS*GSLLPS
Trigger: TGAGGGTAGCAGTGACCCCAAAGACATCGACCAGGA...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCCTCCTCCCTCTTCTaGGCCAGCTTGGACCCGGCC +
Preference number: 5 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLASSLF*ASLDPA
Trigger: GGCCGGGTCCAAGCTGGCCAAGAAGAGGGAGGAGGC...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GAGTGTGCACGCTGCCTCTGCCGCAGTGGAGTGAAGCTCAACCTCGAGGACACCTCTCAGCGCTTCGCCTaGGGATATGGGGAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: ECARCLCRSGVKLNLEDTSQRFA*GYGEKS
Trigger: GCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGA...GGTGTCCTCGAGGTTGAGCTTCACTCCACTGCGGCAGAGGCAGCGTGCACACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS TCA 90 bp TTCCCAGAAGTGTCGAGCAGAAAGGGGAAACAGAACCAAACCCGGTaGCTCTTCTCCAGAAGGGAACCCTCGGGGCTCCCAGCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: FPEVSSRKGKQNQTR*LFSRREPSGLPAWS
Trigger: GGACCAGGCTGGGAGCCCCGAGGGTTCCCTTCTGGAGAAGAGTCACCGGGTTTGGTTCTGTTTCCCCTTTCTGCTCGACACTTCTGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492766.5
CDS TCA 90 bp GCTTTGCTTCCCAGTGAGGCGGAGGCAGGTACTAGGTCTCACTGCTaGAGATCAGAGTTCAGTGCTAGGGCAGCCAGAGAGGGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: ALLPSEAEAGTRSHC*RSEFSARAAREGGE
Trigger: CTCCCCTCCCTCTCTGGCTGCCCTAGCACTGAACTCTGATCTTCAGCAGTGAGACCTAGTACCTGCCTCCGCCTCACTGGGAAGCAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS GCA 90 bp GAACACGGCCTGCCTGCGGTGCCTACGATGGGCTCGGGAGCTGGCTaGTTCGGGGGTCTTCTTCCAATAGTAATAGAAGGTGATCAGCTC +
Preference number: 5 (lower is better)
Translates to: EHGLPAVPTMGSGAG*FGGLLPIVIEGDQL
Trigger: GAGCTGATCACCTTCTATTACTATTGGAAGAAGACCCCCGAAGCAGCCAGCTCCCGAGCCCATCGTAGGCACCGCAGGCAGGCCGTGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000460659.5
ENST00000465125.1
ENST00000476556.5
ENST00000488215.5
ENST00000492766.5
ENST00000656437.1
CDS GCA 90 bp ATGTCTTCATTGATGGGTGAGGTGCGACCATCAGGGCTGGCTGGCTaGTTCTTCCGACCACTGCGTAGTGTCGACATCGAGCCCCGACTC +
Preference number: 5 (lower is better)
Translates to: MSSLMGEVRPSGLAG*FFRPLRSVDIEPRL
Trigger: GAGTCGGGGCTCGATGTCGACACTACGCAGTGGTCGGAAGAAGCAGCCAGCCAGCCCTGATGGTCGCACCTCACCCATCAATGAAGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000656437.1
CDS GCA 90 bp TCACCTTCTTGGCCGACTTCTTCACTGTCTCTGCTTTACTGTCATTaGTGGAGGTACTGGCAGCGCTGGGGGAGTTCCGGCCGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: SPSWPTSSLSLLYCH*WRYWQRWGSSGRWS
Trigger: GCTCCAGCGGCCGGAACTCCCCCAGCGCTGCCAGTACCTCCAGCAATGACAGTAAAGCAGAGACAGTGAAGAAGTCGGCCAAGAAGGTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000505225.1
ENST00000656437.1
CDS CCA 90 bp TCCACGGGCTTCTCAATGGGCGGGAGCTCACCGTATTTCTTGAAGTaGATGCGACAGTCGGTGCAAAGCAGGATGTTCTCCCGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: STGFSMGGSSPYFLK*MRQSVQSRMFSRPP
Trigger: CGGAGGCCGGGAGAACATCCTGCTTTGCACCGACTGTCGCATCCACTTCAAGAAATACGGTGAGCTCCCGCCCATTGAGAAGCCCGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000464367.1
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS-3UTR CAA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGTCTTCCTTGACGGGTTaGAACATAAACGGTGGCGGG +
Preference number: 5 (lower is better)
Translates to: VGSGALVAECVSVSARTVSSLTG*NINGGG
Trigger: CCCGCCACCGTTTATGTTCAAACCCGTCAAGGAAGA...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGTCCTCCTTCACCTTCTaGGCCGACTTCTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: NSYAPDLQASWALEHSWRSSFTF*ADFFTV
Trigger: GACAGTGAAGAAGTCGGCCAAGAAGGTGAAGGAGGA...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGTGCGTTTTTGTCTTCTaGGAGCTGGTCCTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: VGSGALVAECVSVSARTVCVFVF*ELVLSA
Trigger: GGCTGACAGGACCAGCTCCAAGAAGACAAAAACGCA...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGTGGTAGGCGGGGGCTaGATGTGGGGCATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLVVGGG*MWGMAK
Trigger: CTTGGCCATGCCCCACATCAAGCCCCCGCCTACCAC...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTCAGCAGCAATGGTGGTaGGTGGTGGCTCGAAGGATG +
Preference number: 5 (lower is better)
Translates to: SGALVAECVSVSARTVKGQQQWW*VVARRM
Trigger: CATCCTTCGAGCCACCACCAACCACCATTGCTGCTG...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGTGCGGAGTCACGTaGAACATCTGCAGTCGGGCC +
Preference number: 5 (lower is better)
Translates to: IPNSYAPDLQASWALEHSWCGVT*NICSRA
Trigger: GGCCCGACTGCAGATGTTCAACGTGACTCCGCACCA...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS GCA 90 bp GAGGTGGTGGTGAAGCAGTGGCGGCAGGCGTACCCCTTCAGCTCCTaGTCACTGTCCTCACTGTCGAAGTCATCTTCACTGGCTGAACTT +
Preference number: 5 (lower is better)
Translates to: EVVVKQWRQAYPFSS*SLSSLSKSSSLAEL
Trigger: AAGTTCAGCCAGTGAAGATGACTTCGACAGTGAGGACAGTGAGCAGGAGCTGAAGGGGTACGCCTGCCGCCACTGCTTCACCACCACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000464367.1
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS GCA 90 bp CGTAGTGTCGACATCGAGCCCCGACTCCGCCGTGTCCTCATGCTATaGTTCCCACTGAGCCCATCATCCTCTTCCTTGACGGGTTTGAAC +
Preference number: 5 (lower is better)
Translates to: RSVDIEPRLRRVLML*FPLSPSSSSLTGLN
Trigger: GTTCAAACCCGTCAAGGAAGAGGATGATGGGCTCAGTGGGAAGCATAGCATGAGGACACGGCGGAGTCGGGGCTCGATGTCGACACTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000656437.1
CDS GCA 90 bp GTGCTGGTGGTGAAGCAGTGGCGGCAGGCGTACCCCTTCAGCTCCTaGTCACTGTCCTCACTGTCGAAGTCATCTTCACTGGCTGAACTT +
Preference number: 5 (lower is better)
Translates to: VLVVKQWRQAYPFSS*SLSSLSKSSSLAEL
Trigger: AAGTTCAGCCAGTGAAGATGACTTCGACAGTGAGGACAGTGAGCAGGAGCTGAAGGGGTACGCCTGCCGCCACTGCTTCACCACCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400907.6
CDS CCA 90 bp CTGGTCCTGTCAGCCTCCTCCGTATCAGAGGCCACCTTCTCCCGCTaGCGTTTGTTACTCTTAAGAGGGGAAGAGGCTTCCTCCTTCACC +
Preference number: 5 (lower is better)
Translates to: LVLSASSVSEATFSR*RLLLLRGEEASSFT
Trigger: GGTGAAGGAGGAAGCCTCTTCCCCTCTTAAGAGTAACAAACGCCAGCGGGAGAAGGTGGCCTCTGATACGGAGGAGGCTGACAGGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000505225.1
ENST00000656437.1
CDS-3UTR CAA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTCACTTCTCGATGAGCTaGGGCACAGGCTTCTTCACC +
Preference number: 5 (lower is better)
Translates to: SGALVAECVSVSARTVKGHFSMS*GTGFFT
Trigger: GGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTG...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CAA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGGGTCTGGAGGGTGTGTaGACGGGTGTGGACGCGGTG +
Preference number: 5 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLGLEGV*TGVDAV
Trigger: CACCGCGTCCACACCCGTCAACACACCCTCCAGACC...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp ATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGGTCTGGAGGGTGTGTaGACGGGTGTGGACGCGGTG +
Preference number: 5 (lower is better)
Translates to: MFSPVQDSLSFWGTVMQGGLEGV*TGVDAV
Trigger: CACCGCGTCCACACCCGTCAACACACCCTCCAGACC...TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAGCTCACCGTATTTCTaGAAGTGGATGCGACAGTCG +
Preference number: 5 (lower is better)
Translates to: VGSGALVAECVSVSARTVSSPYF*KWMRQS
Trigger: CGACTGTCGCATCCACTTCAAGAAATACGGTGAGCT...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTGAGCGGATGTCTTCATaGATGGGTGAGGTGCGACCA +
Preference number: 5 (lower is better)
Translates to: SGALVAECVSVSARTVKGERMSS*MGEVRP
Trigger: TGGTCGCACCTCACCCATCAATGAAGACATCCGCTC...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTTCTCCCGCTGGCGTTaGTTACTCTTAAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQFSRWR*LLLRGE
Trigger: TTCCCCTCTTAAGAGTAACAAACGCCAGCGGGAGAA...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGCCTTCAGATGGCGAGTaGGGCCTGCTGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SSWIPNSYAPDLQASWALPSDGE*GLLISC
Trigger: GCAGGAGATCAGCAGGCCCAACTCGCCATCTGAAGG...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp CCTGGCCTCCTGAGAAGCAGCCCCCACACAGCATGCTTTCTGAATGCACTGTGGCTGCTACCCTCATCGTaGACGCTGCGACTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: PGLLRSSPHTACFLNALWLLPSS*TLRLSE
Trigger: TTCAGACAGTCGCAGCGTCAACGATGAGGGTAGCAG...CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCTGCTTCTCAGGAGGCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACCAAGGCCGGTGCCTGTaGGATGTGGGTGTGGGGAAC +
Preference number: 5 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHQGRCL*DVGVGN
Trigger: GTTCCCCACACCCACATCCAACAGGCACCGGCCTTG...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCCAAGGCCGGTGCCTGTaGGATGTGGGTGTGGGGAAC +
Preference number: 5 (lower is better)
Translates to: IALGFQIPMPPICKPRGLQGRCL*DVGVGN
Trigger: GTTCCCCACACCCACATCCAACAGGCACCGGCCTTG...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGGTGGTAGGCGGGGGCTaGATGTGGGGCATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLVVGGG*MWGMAK
Trigger: CTTGGCCATGCCCCACATCAAGCCCCCGCCTACCAC...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGTCCAGAGCCTCCTCCTaGATCTGGACGGTGGGGAGT +
Preference number: 5 (lower is better)
Translates to: SSWIPNSYAPDLQASWALSRASS*IWTVGS
Trigger: ACTCCCCACCGTCCAGATCAAGGAGGAGGCTCTGGA...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACTGCTCAGCCTCGCGCTaGGCCTTCTCAATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNCSASR*AFSMAS
Trigger: GGAGGCCATTGAGAAGGCCAAGCGCGAGGCTGAGCA...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGTGCTCAGCCTCGCGCTaGGCCTTCTCAATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGCSASR*AFSMAS
Trigger: GGAGGCCATTGAGAAGGCCAAGCGCGAGGCTGAGCA...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAAGGGGTGGTTGCGGTaGGTGGGCGACATGACGTGG +
Preference number: 5 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGKGWLR*VGDMTW
Trigger: CCACGTCATGTCGCCCACCAACCGCAACCACCCCTT...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS TCA 90 bp GTCTTTGGGGTCACTGCTACCCTCATCGTTGACGCTGCGACTGTCTaGACTCTCTCCCTCACCTTCAGATGGCGAGTTGGGCCTGCTGAT +
Preference number: 5 (lower is better)
Translates to: VFGVTATLIVDAATV*TLSLTFRWRVGPAD
Trigger: ATCAGCAGGCCCAACTCGCCATCTGAAGGTGAGGGAGAGAGTTCAGACAGTCGCAGCGTCAACGATGAGGGTAGCAGTGACCCCAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000656437.1
CDS CCA 90 bp AATCAAAATGGGCCAAGGAAGAAGTCTCGCTTTGACCAGGTCCCATaGCCTCTGCTGTGCCTCGTCCCAGCATCTGCGGTGACACAGGAG +
Preference number: 5 (lower is better)
Translates to: NQNGPRKKSRFDQVP*PLLCLVPASAVTQE
Trigger: CTCCTGTGTCACCGCAGATGCTGGGACGAGGCACAGCAGAGGCCATGGGACCTGGTCAAAGCGAGACTTCTTCCTTGGCCCATTTTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS-3UTR CAA 90 bp TATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGATCTGGAACCTCAGATaGACGGTAGTACCATTTGAC +
Preference number: 5 (lower is better)
Translates to: YAPDLQASWALEHSWRSVIWNLR*TVVPFD
Trigger: GTCAAATGGTACTACCGTCAATCTGAGGTTCCAGAT...CACACTCCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CAA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGTCCCCTGTTTCCTTATaGGGAAGCAGCTCCTTTCTA +
Preference number: 5 (lower is better)
Translates to: VGSGALVAECVSVSARTVSPVSL*GSSSFL
Trigger: TAGAAAGGAGCTGCTTCCCAATAAGGAAACAGGGGA...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCGGTCTGGAGGGTGTGTaGACGGGTGTGGACGCGGTG +
Preference number: 5 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVGLEGV*TGVDAV
Trigger: CACCGCGTCCACACCCGTCAACACACCCTCCAGACC...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp ATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCCCTTCAGATGGCGAGTaGGGCCTGCTGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ISLAQKWPQSVARKMGPSPSDGE*GLLISC
Trigger: GCAGGAGATCAGCAGGCCCAACTCGCCATCTGAAGG...GGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTGTGGTAGGCGGGGGCTaGATGTGGGGCATGGCCAAG +
Preference number: 5 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSVVGGG*MWGMAK
Trigger: CTTGGCCATGCCCCACATCAAGCCCCCGCCTACCAC...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp CAGGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCTCCAGAGCCTCCTCCTaGATCTGGACGGTGGGGAGT +
Preference number: 5 (lower is better)
Translates to: QDLPCSKVASICGKKDGASRASS*IWTVGS
Trigger: ACTCCCCACCGTCCAGATCAAGGAGGAGGCTCTGGA...GGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTTGCTCAGCCTCGCGCTaGGCCTTCTCAATGGCCTCC +
Preference number: 5 (lower is better)
Translates to: VSVSARTVKGVNWILAPTCSASR*AFSMAS
Trigger: GGAGGCCATTGAGAAGGCCAAGCGCGAGGCTGAGCA...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp CAGGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCTGGTGCGGAGTCACGTaGAACATCTGCAGTCGGGCC +
Preference number: 5 (lower is better)
Translates to: QDLPCSKVASICGKKDGAWCGVT*NICSRA
Trigger: GGCCCGACTGCAGATGTTCAACGTGACTCCGCACCA...GGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGTGGTGCGGAGTCACGTaGAACATCTGCAGTCGGGCC +
Preference number: 5 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLWCGVT*NICSRA
Trigger: GGCCCGACTGCAGATGTTCAACGTGACTCCGCACCA...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGATGTGGAACGCCCCTTaGCTCCCTTTAATTAAAGGG +
Preference number: 5 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQMWNAP*LPLIKG
Trigger: CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACAT...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGATGTGGAACGCCCCTTaGCTCCCTTTAATTAAAGGG +
Preference number: 5 (lower is better)
Translates to: VGSGALVAECVSVSARTVMWNAP*LPLIKG
Trigger: CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACAT...CACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACGGTCCTGGATGGACTTaGTGTCCGCCGACCCAGTGT +
Preference number: 5 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHGPGWT*CPPTQC
Trigger: ACACTGGGTCGGCGGACACAAAGTCCATCCAGGACC...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS GCA 90 bp ATGCAGTGTGTTCAGTGCATTCAGAGTGGTGTCATCCCGAGAGGCTaGGACACAGCCGTCCTCTGTAGAGCCTCCATCACACATTCCTGC +
Preference number: 5 (lower is better)
Translates to: MQCVQCIQSGVIPRG*DTAVLCRASITHSC
Trigger: GCAGGAATGTGTGATGGAGGCTCTACAGAGGACGGCTGTGTCGCAGCCTCTCGGGATGACACCACTCTGAATGCACTGAACACACTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000464972.5
ENST00000480342.5
ENST00000656437.1
ENST00000659924.1
CDS CCA 90 bp ACTGAGCCCATCATCCTCTTCCTTGACGGGTTTGAACATAAACGGTaGCGGGTCCACGGGCTTCTCAATGGGCGGGAGCTCACCGTATTT +
Preference number: 5 (lower is better)
Translates to: TEPIILFLDGFEHKR*RVHGLLNGRELTVF
Trigger: AAATACGGTGAGCTCCCGCCCATTGAGAAGCCCGTGGACCCGCCACCGTTTATGTTCAAACCCGTCAAGGAAGAGGATGATGGGCTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000464367.1
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS-3UTR CAA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTCCCGGTCCTTCTCTTaGTCTTTGTCTTTGTCTTTG +
Preference number: 5 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQSRSFS*SLSLSL
Trigger: CAAAGACAAAGACAAAGACAAAGAGAAGGACCGGGA...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CAA 90 bp TCGTGGGCTCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGATCTGGAACCTCAGATaGACGGTAGTACCATTTGAC +
Preference number: 5 (lower is better)
Translates to: SWALEHSWRSVSVCLHAQIWNLR*TVVPFD
Trigger: GTCAAATGGTACTACCGTCAATCTGAGGTTCCAGAT...CTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGAGCCCACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CAA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCCCGTGGTGCCAATCTTaGGAGGTGGTGGTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: IALGFQIPMPPICKPRGLPWCQS*EVVVKQ
Trigger: CTGCTTCACCACCACCTCCAAAGATTGGCACCACGG...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp AATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGCGGCCATCATCCTCTTCCTaGACGGGTTTGAACATAAAC +
Preference number: 5 (lower is better)
Translates to: NSYAPDLQASWALEHSWRPSSSS*TGLNIN
Trigger: GTTTATGTTCAAACCCGTCAAGGAAGAGGATGATGG...CCGCCACGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTCCTCCTTCACCTTCTaGGCCGACTTCTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: IPNSYAPDLQASWALEHSSSFTF*ADFFTV
Trigger: GACAGTGAAGAAGTCGGCCAAGAAGGTGAAGGAGGA...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTCCTTCAGATGGCGAGTaGGGCCTGCTGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: VSVSARTVKGVNWILAPTPSDGE*GLLISC
Trigger: GCAGGAGATCAGCAGGCCCAACTCGCCATCTGAAGG...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTTCCGAGTCACTCTCATaGTCCTGGGGGCTGGGGATG +
Preference number: 5 (lower is better)
Translates to: VSVSARTVKGVNWILAPTSESLS*SWGLGM
Trigger: CATCCCCAGCCCCCAGGACAATGAGAGTGACTCGGA...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp CAGGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCCAGCAGCAATGGTGGTaGGTGGTGGCTCGAAGGATG +
Preference number: 5 (lower is better)
Translates to: QDLPCSKVASICGKKDGAQQQWW*VVARRM
Trigger: CATCCTTCGAGCCACCACCAACCACCATTGCTGCTG...GGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTAAGGGGTGGTTGCGGTaGGTGGGCGACATGACGTGG +
Preference number: 5 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSKGWLR*VGDMTW
Trigger: CCACGTCATGTCGCCCACCAACCGCAACCACCCCTT...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCAGGTCCTGGATGGACTTaGTGTCCGCCGACCCAGTGT +
Preference number: 5 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPGPGWT*CPPTQC
Trigger: ACACTGGGTCGGCGGACACAAAGTCCATCCAGGACC...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS GCA 90 bp AATCTCCCTTTATCCAGTGACAGCTCCATTCATCTCACCGAGCTTTaGCCAGAGCTCTGGGCTGGCTTCACTCTGGCTCTGAGTCCCTGT +
Preference number: 5 (lower is better)
Translates to: NLPLSSDSSIHLTEL*PELWAGFTLALSPC
Trigger: ACAGGGACTCAGAGCCAGAGTGAAGCCAGCCCAGAGCTCTGGGCAAAGCTCGGTGAGATGAATGGAGCTGTCACTGGATAAAGGGAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CCA 90 bp CCTCCAGGACTTTGTCTGGTAAACAAGACTTTCGCTTCCTCCCCCTaGGAGGCTCAAGCCCCCACACATCCCAGGAAACTGAAGAAGTTG +
Preference number: 5 (lower is better)
Translates to: PPGLCLVNKTFASSP*EAQAPTHPRKLKKL
Trigger: CAACTTCTTCAGTTTCCTGGGATGTGTGGGGGCTTGAGCCTCCCAGGGGGAGGAAGCGAAAGTCTTGTTTACCAGACAAAGTCCTGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464367.1
CDS-3UTR CAA 90 bp TGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTGGATCATGTCTGGTTTaGTTTTCCGAGGGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: WPQSVARKMGPSSPQDPSGSCLV*FSEGEG
Trigger: CCCCTCGCCCTCGGAAAACAAAACCAGACATGATCC...ACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR CAA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCGGATCATGTCTGGTTTaGTTTTCCGAGGGCGAGGGG +
Preference number: 5 (lower is better)
Translates to: IALGFQIPMPPICKPRGLGSCLV*FSEGEG
Trigger: CCCCTCGCCCTCGGAAAACAAAACCAGACATGATCC...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR CAA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGCACTTCTCGATGAGCTaGGGCACAGGCTTCTTCACC +
Preference number: 5 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLHFSMS*GTGFFT
Trigger: GGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTG...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CAA 90 bp CCTGGCCTCCTGAGAAGCAGCCCCCACACAGCATGCTTTCTGAATGCACTGTGGTCCCCTGTTTCCTTATaGGGAAGCAGCTCCTTTCTA +
Preference number: 5 (lower is better)
Translates to: PGLLRSSPHTACFLNALWSPVSL*GSSSFL
Trigger: TAGAAAGGAGCTGCTTCCCAATAAGGAAACAGGGGA...CCACAGTGCATTCAGAAAGCATGCTGTGTGGGGGCTGCTTCTCAGGAGGCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTCCGTGGTGCCAATCTTaGGAGGTGGTGGTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: VSVSARTVKGVNWILAPTPWCQS*EVVVKQ
Trigger: CTGCTTCACCACCACCTCCAAAGATTGGCACCACGG...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp CTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGATCTGCTTTACTGTCATaGCTGGAGGTACTGGCAGCG +
Preference number: 5 (lower is better)
Translates to: LLDSKFLCPRSASLVGSGSALLS*LEVLAA
Trigger: CGCTGCCAGTACCTCCAGCAATGACAGTAAAGCAGA...TCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCCTGCTACCCTCATCGTaGACGCTGCGACTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: IALGFQIPMPPICKPRGLLLPSS*TLRLSE
Trigger: TTCAGACAGTCGCAGCGTCAACGATGAGGGTAGCAG...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp CCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCTGCTACCCTCATCGTaGACGCTGCGACTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: PVQDSLSFWGTVMQGDPNLLPSS*TLRLSE
Trigger: TTCAGACAGTCGCAGCGTCAACGATGAGGGTAGCAG...GTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACTCCTGGTCGATGTCTTaGGGGTCACTGCTACCCTCA +
Preference number: 5 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHSWSMS*GSLLPS
Trigger: TGAGGGTAGCAGTGACCCCAAAGACATCGACCAGGA...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATGCCTCCTCCCTCTTCTaGGCCAGCTTGGACCCGGCC +
Preference number: 5 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNASSLF*ASLDPA
Trigger: GGCCGGGTCCAAGCTGGCCAAGAAGAGGGAGGAGGC...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp CTACAATTCTTGGGATGGGACCAGCACAATGGCAGAAGAGACCTCCAGTGTCTGCAGCAGCAATGGTGGTaGGTGGTGGCTCGAAGGATG +
Preference number: 5 (lower is better)
Translates to: LQFLGWDQHNGRRDLQCLQQQWW*VVARRM
Trigger: CATCCTTCGAGCCACCACCAACCACCATTGCTGCTG...CAGACACTGGAGGTCTCTTCTGCCATTGTGCTGGTCCCATCCCAAGAATTGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp CCTGCCATGAGGGCCTGTCCCCACCCCAGAAGGAAACGAATGCCTTCAAGCCAAAATAATCTTCCTGACTaGGTAGGTGGCCACCATGCA +
Preference number: 5 (lower is better)
Translates to: PAMRACPHPRRKRMPSSQNNLPD*VGGHHA
Trigger: TGCATGGTGGCCACCTACCAAGTCAGGAAGATTATT...TTGGCTTGAAGGCATTCGTTTCCTTCTGGGGTGGGGACAGGCCCTCATGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGTCTCAGCGCTTCGCCTaGGGATATGGGGAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGSQRFA*GYGEKS
Trigger: GCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGA...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS TCA 90 bp AACGCAGAAACTTCCCCTCACTCTGACAGGACTGAGCATGTGCTGTaGCCCTCCCTCATCCACACACTGTCTCTCCACGACGCAATCAAT +
Preference number: 5 (lower is better)
Translates to: NAETSPHSDRTEHVL*PSLIHTLSLHDAIN
Trigger: ATTGATTGCGTCGTGGAGAGACAGTGTGTGGATGAGGGAGGGTCACAGCACATGCTCAGTCCTGTCAGAGTGAGGGGAAGTTTCTGCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507012.1
CDS GCA 90 bp TTGGGAAGCAGCTCCTTTCTAATTCTGAAGAAGTTCTTCCCGTACTaGCTGAGTCCCTTAACGAAGCGTTTCTCGGGGCTCCCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: LGSSSFLILKKFFPY*LSPLTKRFSGLPAW
Trigger: CCAGGCTGGGAGCCCCGAGAAACGCTTCGTTAAGGGACTCAGGCAGTACGGGAAGAACTTCTTCAGAATTAGAAAGGAGCTGCTTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476556.5
CDS GCA 90 bp GTCCCAGCATCTGCGGTGACACAGGAGAGAGTGTTGACAAGGATGTaGTGTCCGGGAATCTCCCTTTATCCAGTGACAGCTCCATTCATC +
Preference number: 5 (lower is better)
Translates to: VPASAVTQERVLTRM*CPGISLYPVTAPFI
Trigger: GATGAATGGAGCTGTCACTGGATAAAGGGAGATTCCCGGACAGCACATCCTTGTCAACACTCTCTCCTGTGTCACCGCAGATGCTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS GCA 90 bp GCCTGCACCACGTGGCTTTTCTTGACTTCACAGCCTTCTTCTATTTaGACCTCCCTCGTAATTGCGGCTTGCATGTGGCTTCTCACAGCC +
Preference number: 5 (lower is better)
Translates to: ACTTWLFLTSQPSSI*TSLVIAACMWLLTA
Trigger: GGCTGTGAGAAGCCACATGCAAGCCGCAATTACGAGGGAGGTGCAAATAGAAGAAGGCTGTGAAGTCAAGAAAAGCCACGTGGTGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CCA 90 bp CAGCCTTCTTCTATTTGCACCTCCCTCGTAATTGCGGCTTGCATGTaGCTTCTCACAGCCTCTCCGGTTGTTCCGCAGCTTATGACTGAG +
Preference number: 5 (lower is better)
Translates to: QPSSICTSLVIAACM*LLTASPVVPQLMTE
Trigger: CTCAGTCATAAGCTGCGGAACAACCGGAGAGGCTGTGAGAAGCCACATGCAAGCCGCAATTACGAGGGAGGTGCAAATAGAAGAAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS-3UTR CAA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTGACCTTTCCTGCGACTaGAACCTAGGCTCCCTCCTC +
Preference number: 5 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSDLSCD*NLGSLL
Trigger: GAGGAGGGAGCCTAGGTTCAAGTCGCAGGAAAGGTC...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR CAA 90 bp CAGGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCCAACAGGCCTGGGAGTaGTGGACCAGTTTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: QDLPCSKVASICGKKDGAQQAWE*WTSLKS
Trigger: AGACTTCAAACTGGTCCACAACTCCCAGGCCTGTTG...GGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR CAA 90 bp TCTGGAGCACTCGTGGCGGAGTGTGTCAGTGTGTCTGCACGCACAGTGAAGGGTAAGAGCTCTCGGTTCTaGATAACTGGGTCTGTAATG +
Preference number: 5 (lower is better)
Translates to: SGALVAECVSVSARTVKGKSSRF*ITGSVM
Trigger: CATTACAGACCCAGTTATCAAGAACCGAGAGCTCTT...ACCCTTCACTGTGCGTGCAGACACACTGACACACTCCGCCACGAGTGCTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CAA 90 bp CCTGCCATGAGGGCCTGTCCCCACCCCAGAAGGAAACGAATGCCTTCAAGCCAATACTGTTCAGCCTCCTaGTCTCAGGGTTATATCCTA +
Preference number: 5 (lower is better)
Translates to: PAMRACPHPRRKRMPSSQYCSAS*SQGYIL
Trigger: TAGGATATAACCCTGAGACAAGGAGGCTGAACAGTA...TTGGCTTGAAGGCATTCGTTTCCTTCTGGGGTGGGGACAGGCCCTCATGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337907.7
ENST00000400908.7
CDS-3UTR CAA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGCACTTCTCGATGAGCTaGGGCACAGGCTTCTTCACC +
Preference number: 5 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAEHFSMS*GTGFFT
Trigger: GGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTG...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CAA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCACACTTCTCGATGAGCTaGGGCACAGGCTTCTTCACC +
Preference number: 5 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPHFSMS*GTGFFT
Trigger: GGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTG...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CAA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTCCGTGGTGCCAATCTTaGGAGGTGGTGGTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSPWCQS*EVVVKQ
Trigger: CTGCTTCACCACCACCTCCAAAGATTGGCACCACGG...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACTCTTCCTTGACGGGTTaGAACATAAACGGTGGCGGG +
Preference number: 5 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHSSLTG*NINGGG
Trigger: CCCGCCACCGTTTATGTTCAAACCCGTCAAGGAAGA...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp CAGGATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCTCTGCTTTACTGTCATaGCTGGAGGTACTGGCAGCG +
Preference number: 5 (lower is better)
Translates to: QDLPCSKVASICGKKDGASALLS*LEVLAA
Trigger: CGCTGCCAGTACCTCCAGCAATGACAGTAAAGCAGA...GGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGTCTGCTTTACTGTCATaGCTGGAGGTACTGGCAGCG +
Preference number: 5 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGSALLS*LEVLAA
Trigger: CGCTGCCAGTACCTCCAGCAATGACAGTAAAGCAGA...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGTTCTCCCGCTGGCGTTaGTTACTCTTAAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: SSWIPNSYAPDLQASWALFSRWR*LLLRGE
Trigger: TTCCCCTCTTAAGAGTAACAAACGCCAGCGGGAGAA...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTCAGCAGCAATGGTGGTaGGTGGTGGCTCGAAGGATG +
Preference number: 5 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSQQQWW*VVARRM
Trigger: CATCCTTCGAGCCACCACCAACCACCATTGCTGCTG...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCAATAATCTTCCTGACTaGGTAGGTGGCCACCATGCA +
Preference number: 5 (lower is better)
Translates to: DSKFLCPRSASLVGSGALNNLPD*VGGHHA
Trigger: TGCATGGTGGCCACCTACCAAGTCAGGAAGATTATT...GAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGAATAATCTTCCTGACTaGGTAGGTGGCCACCATGCA +
Preference number: 5 (lower is better)
Translates to: IPNSYAPDLQASWALEHSNNLPD*VGGHHA
Trigger: TGCATGGTGGCCACCTACCAAGTCAGGAAGATTATT...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGAAGAGCTCTCGGTTCTaGATAACTGGGTCTGTAATG +
Preference number: 5 (lower is better)
Translates to: IPNSYAPDLQASWALEHSKSSRF*ITGSVM
Trigger: CATTACAGACCCAGTTATCAAGAACCGAGAGCTCTT...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CAA 90 bp TGCAGATGCTCAACAGCCACAAGAGACCAGTGGTTACCACATTGGAAAGCACAGCACTTCTCGATGAGCTaGGGCACAGGCTTCTTCACC +
Preference number: 5 (lower is better)
Translates to: CRCSTATRDQWLPHWKAQHFSMS*GTGFFT
Trigger: GGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTG...CTGTGCTTTCCAATGTGGTAACCACTGGTCTCTTGTGGCTGTTGAGCATCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CAA 90 bp AGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGTCCCCTGTTTCCTTATaGGGAAGCAGCTCCTTTCTA +
Preference number: 5 (lower is better)
Translates to: SSWIPNSYAPDLQASWALSPVSL*GSSSFL
Trigger: TAGAAAGGAGCTGCTTCCCAATAAGGAAACAGGGGA...CAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGAGGTCTGGAGGGTGTGTaGACGGGTGTGGACGCGGTG +
Preference number: 5 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRGLEGV*TGVDAV
Trigger: CACCGCGTCCACACCCGTCAACACACCCTCCAGACC...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp ATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCAGCTCACCGTATTTCTaGAAGTGGATGCGACAGTCG +
Preference number: 5 (lower is better)
Translates to: ISLAQKWPQSVARKMGPSSSPYF*KWMRQS
Trigger: CGACTGTCGCATCCACTTCAAGAAATACGGTGAGCT...GGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTCCTCCTTCACCTTCTaGGCCGACTTCTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAESSFTF*ADFFTV
Trigger: GACAGTGAAGAAGTCGGCCAAGAAGGTGAAGGAGGA...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp CGGTCCAAGCCTCTGTCCATGTGGAACGCCCCTTTGCTCCCTTTAATTAAAGGGTTCTCCCGCTGGCGTTaGTTACTCTTAAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: RSKPLSMWNAPLLPLIKGFSRWR*LLLRGE
Trigger: TTCCCCTCTTAAGAGTAACAAACGCCAGCGGGAGAA...CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACATGGACAGAGGCTTGGACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GTCAGTGTGTCTGCACGCACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTTGCGTTTTTGTCTTCTaGGAGCTGGTCCTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: VSVSARTVKGVNWILAPTCVFVF*ELVLSA
Trigger: GGCTGACAGGACCAGCTCCAAGAAGACAAAAACGCA...AGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGTGCGTGCAGACACACTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGACTCCAGGATCTCCCTaGCTCAAAAGTGGCCTCAAT +
Preference number: 5 (lower is better)
Translates to: DVQSSPGLTKFLGDCHAGTPGSP*LKSGLN
Trigger: ATTGAGGCCACTTTTGAGCAAGGGAGATCCTGGAGT...CCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp ATAGCTCTTGGATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCACTCCAGGATCTCCCTaGCTCAAAAGTGGCCTCAAT +
Preference number: 5 (lower is better)
Translates to: IALGFQIPMPPICKPRGLTPGSP*LKSGLN
Trigger: ATTGAGGCCACTTTTGAGCAAGGGAGATCCTGGAGT...GAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAATCCAAGAGCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS GCA 90 bp GGCACATGCAGTCTCAGAGACCTCATAGAGCTTTCACTGAGCTTGTaGTATGACCTAAGCCTTCACGCAGAACGCAGAAACTTCCCCTCA +
Preference number: 5 (lower is better)
Translates to: GTCSLRDLIELSLSL*YDLSLHAERRNFPS
Trigger: TGAGGGGAAGTTTCTGCGTTCTGCGTGAAGGCTTAGGTCATAGCACAAGCTCAGTGAAAGCTCTATGAGGTCTCTGAGACTGCATGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464972.5
ENST00000507012.1
CDS GCA 90 bp TTGGGAAGCAGCTCCTTTCTAATTCTGAAGAAGTTCTTCCCGTACTaGCTGAGTCCCTTAACGAAGCGTTTCGCAGCAAGCGTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: LGSSSFLILKKFFPY*LSPLTKRFAASVGR
Trigger: TCTCCCCACGCTTGCTGCGAAACGCTTCGTTAAGGGACTCAGGCAGTACGGGAAGAACTTCTTCAGAATTAGAAAGGAGCTGCTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465125.1
CDS-3UTR CAA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTCAACAGGCCTGGGAGTaGTGGACCAGTTTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSQQAWE*WTSLKS
Trigger: AGACTTCAAACTGGTCCACAACTCCCAGGCCTGTTG...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CAA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCTCTGCTTTACTGTCATaGCTGGAGGTACTGGCAGCG +
Preference number: 5 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVSALLS*LEVLAA
Trigger: CGCTGCCAGTACCTCCAGCAATGACAGTAAAGCAGA...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTTCCTCCTTCACCTTCTaGGCCGACTTCTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSSSFTF*ADFFTV
Trigger: GACAGTGAAGAAGTCGGCCAAGAAGGTGAAGGAGGA...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACATGTGGAACGCCCCTTaGCTCCCTTTAATTAAAGGG +
Preference number: 5 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHMWNAP*LPLIKG
Trigger: CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACAT...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp ATTCCAAATTCCTATGCCCCCGATCTGCAAGCCTCGTGGGCTCTGGAGCACTCGTGGAAATGTCGCTATTaGACGCCAGAACCTGAATTT +
Preference number: 5 (lower is better)
Translates to: IPNSYAPDLQASWALEHSWKCRY*TPEPEF
Trigger: AAATTCAGGTTCTGGCGTCAAATAGCGACATTTCCA...CGAGTGCTCCAGAGCCCACGAGGCTTGCAGATCGGGGGCATAGGAATTTGGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp ATCTCCCTTGCTCAAAAGTGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCAGGTTCATGTCAGCTTaGCCTCCCTGTGAACAAACT +
Preference number: 5 (lower is better)
Translates to: ISLAQKWPQSVARKMGPSRFMSA*PPCEQT
Trigger: AGTTTGTTCACAGGGAGGCAAAGCTGACATGAACCT...GGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCACTTTTGAGCAAGGGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp TGGCCTCAATCTGTGGCAAGAAAGATGGGGCCGTCCTCACCACAAGATCCAAGTAGGTTCATGTCAGCTTaGCCTCCCTGTGAACAAACT +
Preference number: 5 (lower is better)
Translates to: WPQSVARKMGPSSPQDPSRFMSA*PPCEQT
Trigger: AGTTTGTTCACAGGGAGGCAAAGCTGACATGAACCT...ACTTGGATCTTGTGGTGAGGACGGCCCCATCTTTCTTGCCACAGATTGAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp ACTCAAATGGTTTACCAGTGCAATGTGGGGTCACCATGCAGACCTGCCCCTAGGAGGTTCATGTCAGCTTaGCCTCCCTGTGAACAAACT +
Preference number: 5 (lower is better)
Translates to: TQMVYQCNVGSPCRPAPRRFMSA*PPCEQT
Trigger: AGTTTGTTCACAGGGAGGCAAAGCTGACATGAACCT...CCTAGGGGCAGGTCTGCATGGTGACCCCACATTGCACTGGTAAACCATTTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS TCA 90 bp ATGCAGTCTCAGAGACCTCATAGAGCTTTCACTGAGCTTGTGCTATaGCCTAAGCCTTCACGCAGAACGCAGAAACTTCCCCTCACTCTG +
Preference number: 5 (lower is better)
Translates to: MQSQRPHRAFTELVL*PKPSRRTQKLPLTL
Trigger: CAGAGTGAGGGGAAGTTTCTGCGTTCTGCGTGAAGGCTTAGGTCATAGCACAAGCTCAGTGAAAGCTCTATGAGGTCTCTGAGACTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464972.5
ENST00000507012.1
CDS GCA 90 bp TTGGGAAGCAGCTCCTTTCTAATTCTGAAGAAGTTCTTCCCGTACTaGCTGAGTCCCTTAACGAAGCGTTTCACTTCGTCCTCGGTCCAG +
Preference number: 5 (lower is better)
Translates to: LGSSSFLILKKFFPY*LSPLTKRFTSSSVQ
Trigger: CTGGACCGAGGACGAAGTGAAACGCTTCGTTAAGGGACTCAGGCAGTACGGGAAGAACTTCTTCAGAATTAGAAAGGAGCTGCTTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000656437.1
CDS-3UTR CAA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATCAACAGGCCTGGGAGTaGTGGACCAGTTTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYQQAWE*WTSLKS
Trigger: AGACTTCAAACTGGTCCACAACTCCCAGGCCTGTTG...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CAA 90 bp GTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGCAGAGCACCCATCATCCTCTTCCTaGACGGGTTTGAACATAAAC +
Preference number: 5 (lower is better)
Translates to: VQNGRGLMEQMSVLLAEHPSSSS*TGLNIN
Trigger: GTTTATGTTCAAACCCGTCAAGGAAGAGGATGATGG...GTGCTCTGCCAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGCTGCTACCCTCATCGTaGACGCTGCGACTGTCTGAA +
Preference number: 5 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKLLPSS*TLRLSE
Trigger: TTCAGACAGTCGCAGCGTCAACGATGAGGGTAGCAG...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp ATGTTCAGTCCAGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGATCTGTCCTACAATTCTaGGGATGGGACCAGCACAAT +
Preference number: 5 (lower is better)
Translates to: MFSPVQDSLSFWGTVMQGSVLQF*GWDQHN
Trigger: ATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGA...TCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACTGGACTGAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGAGGTCCTGGATGGACTTaGTGTCCGCCGACCCAGTGT +
Preference number: 5 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRGPGWT*CPPTQC
Trigger: ACACTGGGTCGGCGGACACAAAGTCCATCCAGGACC...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp GCACTCCCTGTGCAAAATGGAAGAGGTCTGATGGAGCAGATGTCTGTGCTGCTGGGACTCGACTCTTCTTaGGAAAAATGGATGCCAAAG +
Preference number: 5 (lower is better)
Translates to: ALPVQNGRGLMEQMSVLLGLDSS*EKWMPK
Trigger: CTTTGGCATCCATTTTTCCAAAGAAGAGTCGAGTCC...CAGCAGCACAGACATCTGCTCCATCAGACCTCTTCCATTTTGCACAGGGAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp AGTGGTATGATCACAGTTCACTGTAACGTGGAGCTTCCGGGCTCAAATGATCCTACCGTGCATCTACACTaGGGCCAGCACATTGCAGAT +
Preference number: 5 (lower is better)
Translates to: SGMITVHCNVELPGSNDPTVHLH*GQHIAD
Trigger: ATCTGCAATGTGCTGGCCCAAGTGTAGATGCACGGT...AGGATCATTTGAGCCCGGAAGCTCCACGTTACAGTGAACTGTGATCATACCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS CCA 90 bp AGGTCACAGTCGTTAACTCCAGGCATCCAGACCAGTTCCTCATGTTaGGTCACTGTATCACCATCTGGAGAAGGAAATGGTTGCAGATCT +
Preference number: 5 (lower is better)
Translates to: RSQSLTPGIQTSSSC*VTVSPSGEGNGCRS
Trigger: AGATCTGCAACCATTTCCTTCTCCAGATGGTGATACAGTGACCCAACATGAGGAACTGGTCTGGATGCCTGGAGTTAACGACTGTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000464972.5
ENST00000480342.5
ENST00000507012.1
ENST00000656437.1
ENST00000659924.1
CDS-3UTR CAA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCAATCTGGAACCTCAGATaGACGGTAGTACCATTTGAC +
Preference number: 5 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPIWNLR*TVVPFD
Trigger: GTCAAATGGTACTACCGTCAATCTGAGGTTCCAGAT...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CAA 90 bp CTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATAGCTCACCGTATTTCTaGAAGTGGATGCGACAGTCG +
Preference number: 5 (lower is better)
Translates to: LTHPFGRHMSWVTCVLSYSSPYF*KWMRQS
Trigger: CGACTGTCGCATCCACTTCAAGAAATACGGTGAGCT...ATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp CCTTCTAACACATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGCCATCATCCTCTTCCTaGACGGGTTTGAACATAAAC +
Preference number: 5 (lower is better)
Translates to: PSNTSLWQAYVLGHLCAEPSSSS*TGLNIN
Trigger: GTTTATGTTCAAACCCGTCAAGGAAGAGGATGATGG...CTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATGTGTTAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCGAGCGGATGTCTTCATaGATGGGTGAGGTGCGACCA +
Preference number: 5 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCERMSS*MGEVRP
Trigger: TGGTCGCACCTCACCCATCAATGAAGACATCCGCTC...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTATGTGGAACGCCCCTTaGCTCCCTTTAATTAAAGGG +
Preference number: 5 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSMWNAP*LPLIKG
Trigger: CCCTTTAATTAAAGGGAGCAAAGGGGCGTTCCACAT...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp AATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACAGTTCTGTCCTACAATTCTaGGGATGGGACCAGCACAAT +
Preference number: 5 (lower is better)
Translates to: NLQWTQAHALSIPWKQNSSVLQF*GWDQHN
Trigger: ATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGA...ACTGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp AGTCCAGGACTCACTAAGTTTCTGGGGGACTGTCATGCAGGGAGATCCAAACCAGGACTCGACTCTTCTTaGGAAAAATGGATGCCAAAG +
Preference number: 5 (lower is better)
Translates to: SPGLTKFLGDCHAGRSKPGLDSS*EKWMPK
Trigger: CTTTGGCATCCATTTTTCCAAAGAAGAGTCGAGTCC...TGGTTTGGATCTCCCTGCATGACAGTCCCCCAGAAACTTAGTGAGTCCTGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS TCA 90 bp AGCTGCTCTTCCCACAGCTGTTTCCTCCTCTGTCCTTTCATCCACTaGAAGCCTGAACAAAAGACCTCAACACACAAGAAATGTGAGGGA +
Preference number: 5 (lower is better)
Translates to: SCSSHSCFLLCPFIH*KPEQKTSTHKKCEG
Trigger: TCCCTCACATTTCTTGTGTGTTGAGGTCTTTTGTTCAGGCTTTCAGTGGATGAAAGGACAGAGGAGGAAACAGCTGTGGGAAGAGCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS-3UTR CAA 90 bp AGAATTCGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGCAACAGGCCTGGGAGTaGTGGACCAGTTTGAAGTCT +
Preference number: 5 (lower is better)
Translates to: RIRPNAKVLKICPTSQTRQQAWE*WTSLKS
Trigger: AGACTTCAAACTGGTCCACAACTCCCAGGCCTGTTG...CCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCGAATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CAA 90 bp TGCAGATGCTCAACAGCCACAAGAGACCAGTGGTTACCACATTGGAAAGCACAGAAGAGCTCTCGGTTCTaGATAACTGGGTCTGTAATG +
Preference number: 5 (lower is better)
Translates to: CRCSTATRDQWLPHWKAQKSSRF*ITGSVM
Trigger: CATTACAGACCCAGTTATCAAGAACCGAGAGCTCTT...CTGTGCTTTCCAATGTGGTAACCACTGGTCTCTTGTGGCTGTTGAGCATCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CAA 90 bp GAAATCTACAATGGACACAGGCCCATGCGCTTTCCATCCCGTGGAAACAGAACATACTGTTCAGCCTCCTaGTCTCAGGGTTATATCCTA +
Preference number: 5 (lower is better)
Translates to: EIYNGHRPMRFPSRGNRTYCSAS*SQGYIL
Trigger: TAGGATATAACCCTGAGACAAGGAGGCTGAACAGTA...TGTTCTGTTTCCACGGGATGGAAAGCGCATGGGCCTGTGTCCATTGTAGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CAA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGAGCTCACCGTATTTCTaGAAGTGGATGCGACAGTCG +
Preference number: 5 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKSSPYF*KWMRQS
Trigger: CGACTGTCGCATCCACTTCAAGAAATACGGTGAGCT...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGTTCTCCCGCTGGCGTTaGTTACTCTTAAGAGGGGAA +
Preference number: 5 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKFSRWR*LLLRGE
Trigger: TTCCCCTCTTAAGAGTAACAAACGCCAGCGGGAGAA...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp TTTAGATGGAAGAATCTCAGCGCTTCGCCTTGGGATATGGGGAGAAAAGCAAAGACTCCAGGATCTCCCTaGCTCAAAAGTGGCCTCAAT +
Preference number: 5 (lower is better)
Translates to: FRWKNLSASPWDMGRKAKTPGSP*LKSGLN
Trigger: ATTGAGGCCACTTTTGAGCAAGGGAGATCCTGGAGT...CTTTGCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGATTCTTCCATCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCGGACTCGACTCTTCTTaGGAAAAATGGATGCCAAAG +
Preference number: 5 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVGLDSS*EKWMPK
Trigger: CTTTGGCATCCATTTTTCCAAAGAAGAGTCGAGTCC...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp CGTGCATCTACACTTGGGCCAGCACATTGCAGATGCTCAACAGCCACAAGAGACTTTTGTTTCCCCTTCTaGACAATACAACATGGGACT +
Preference number: 5 (lower is better)
Translates to: RASTLGPAHCRCSTATRDFCFPF*TIQHGT
Trigger: AGTCCCATGTTGTATTGTCAAGAAGGGGAAACAAAA...GTCTCTTGTGGCTGTTGAGCATCTGCAATGTGCTGGCCCAAGTGTAGATGCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CAA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGCAAGGCCGGTGCCTGTaGGATGTGGGTGTGGGGAAC +
Preference number: 5 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWQGRCL*DVGVGN
Trigger: GTTCCCCACACCCACATCCAACAGGCACCGGCCTTG...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp CACTTCCAGGATGAAGAGTGGGACTCAAATGGTTTACCAGTGCAATGTGGGGTCTGGAAATGTCGCTATTaGACGCCAGAACCTGAATTT +
Preference number: 5 (lower is better)
Translates to: HFQDEEWDSNGLPVQCGVWKCRY*TPEPEF
Trigger: AAATTCAGGTTCTGGCGTCAAATAGCGACATTTCCA...GACCCCACATTGCACTGGTAAACCATTTGAGTCCCACTCTTCATCCTGGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp ACTGACCGTGCATCTACACTTGGGCCAGCACATTGCAGATGCTCAACAGCCACACATGATACCTCACTCTaGCTGACAATATTGGTAATA +
Preference number: 5 (lower is better)
Translates to: TDRASTLGPAHCRCSTATHDTSL*LTILVI
Trigger: TATTACCAATATTGTCAGCAAGAGTGAGGTATCATG...TGTGGCTGTTGAGCATCTGCAATGTGCTGGCCCAAGTGTAGATGCACGGTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CAA 90 bp ATTCGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGGAACTACGCTGCTGGCTTTaGTTTGGAACAATAGCGCTC +
Preference number: 5 (lower is better)
Translates to: IRPNAKVLKICPTSQTRELRCWL*FGTIAL
Trigger: GAGCGCTATTGTTCCAAACAAAAGCCAGCAGCGTAG...TTCCCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS GCA 90 bp TTGGGAAGCAGCTCCTTTCTAATTCTGAAGAAGTTCTTCCCGTACTaGCTGAGTCCCTTAACGAAGCGTTTTCTGCTTGCTGATGTCTTA +
Preference number: 5 (lower is better)
Translates to: LGSSSFLILKKFFPY*LSPLTKRFLLADVL
Trigger: TAAGACATCAGCAAGCAGAAAACGCTTCGTTAAGGGACTCAGGCAGTACGGGAAGAACTTCTTCAGAATTAGAAAGGAGCTGCTTCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488215.5
CDS-3UTR CAA 90 bp CATCCCTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATAAGAGCTCTCGGTTCTaGATAACTGGGTCTGTAATG +
Preference number: 5 (lower is better)
Translates to: HPFGRHMSWVTCVLSYLYKSSRF*ITGSVM
Trigger: CATTACAGACCCAGTTATCAAGAACCGAGAGCTCTT...ATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAGGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CAA 90 bp ACTAATAGCTCATTTACATACACAGCTGGATACAATGGGCTGCATGCAGAGGGGTACTGTTCAGCCTCCTaGTCTCAGGGTTATATCCTA +
Preference number: 5 (lower is better)
Translates to: TNSSFTYTAGYNGLHAEGYCSAS*SQGYIL
Trigger: TAGGATATAACCCTGAGACAAGGAGGCTGAACAGTA...CCCCTCTGCATGCAGCCCATTGTATCCAGCTGTGTATGTAAATGAGCTATTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CAA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCTCCCCTGTTTCCTTATaGGGAAGCAGCTCCTTTCTA +
Preference number: 5 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCSPVSL*GSSSFL
Trigger: TAGAAAGGAGCTGCTTCCCAATAAGGAAACAGGGGA...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CAA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCTCCGAGTCACTCTCATaGTCCTGGGGGCTGGGGATG +
Preference number: 5 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFSESLS*SWGLGM
Trigger: CATCCCCAGCCCCCAGGACAATGAGAGTGACTCGGA...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGTCCAGAGCCTCCTCCTaGATCTGGACGGTGGGGAGT +
Preference number: 5 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWSRASS*IWTVGS
Trigger: ACTCCCCACCGTCCAGATCAAGGAGGAGGCTCTGGA...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGTGGTGCGGAGTCACGTaGAACATCTGCAGTCGGGCC +
Preference number: 5 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWWCGVT*NICSRA
Trigger: GGCCCGACTGCAGATGTTCAACGTGACTCCGCACCA...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCAATAATCTTCCTGACTaGGTAGGTGGCCACCATGCA +
Preference number: 5 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCNNLPD*VGGHHA
Trigger: TGCATGGTGGCCACCTACCAAGTCAGGAAGATTATT...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CAA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATTCTGTCCTACAATTCTaGGGATGGGACCAGCACAAT +
Preference number: 5 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNSVLQF*GWDQHN
Trigger: ATTGTGCTGGTCCCATCCCAAGAATTGTAGGACAGA...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp AGTGGTATGATCACAGTTCACTGTAACGTGGAGCTTCCGGGCTCAAATGATCCTCTCTTGCTGACAATATaGGTAATACGGGAGCATGAA +
Preference number: 5 (lower is better)
Translates to: SGMITVHCNVELPGSNDPLLLTI*VIREHE
Trigger: TTCATGCTCCCGTATTACCAATATTGTCAGCAAGAG...AGGATCATTTGAGCCCGGAAGCTCCACGTTACAGTGAACTGTGATCATACCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS GCA 90 bp CTTTTACAAGTCACAAGATGGAGATGTAGCTTCATTAAAACTGTCTaGTGGATGGGAATCCATGGGTTTGCAAGGCTGTATCTGTGGGCA +
Preference number: 5 (lower is better)
Translates to: LLQVTRWRCSFIKTV*WMGIHGFARLYLWA
Trigger: TGCCCACAGATACAGCCTTGCAAACCCATGGATTCCCATCCAGCAGACAGTTTTAATGAAGCTACATCTCCATCTTGTGACTTGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS CCA 90 bp AAGTCACAAGATGGAGATGTAGCTTCATTAAAACTGTCTGCTGGATaGGAATCCATGGGTTTGCAAGGCTGTATCTGTGGGCACATTTCT +
Preference number: 5 (lower is better)
Translates to: KSQDGDVASLKLSAG*ESMGLQGCICGHIS
Trigger: AGAAATGTGCCCACAGATACAGCCTTGCAAACCCATGGATTCCCATCCAGCAGACAGTTTTAATGAAGCTACATCTCCATCTTGTGACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS CCA 90 bp TTACAAGTCACAAGATGGAGATGTAGCTTCATTAAAACTGTCTGCTaGATGGGAATCCATGGGTTTGCAAGGCTGTATCTGTGGGCACAT +
Preference number: 5 (lower is better)
Translates to: LQVTRWRCSFIKTVC*MGIHGFARLYLWAH
Trigger: ATGTGCCCACAGATACAGCCTTGCAAACCCATGGATTCCCATCCAGCAGACAGTTTTAATGAAGCTACATCTCCATCTTGTGACTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS-3UTR CAA 90 bp ATTCGACCAAATGCCAAAGTTCTTAAGATCTGCCCCACTTCCCAAACAAGGGAAATCTGGAACCTCAGATaGACGGTAGTACCATTTGAC +
Preference number: 5 (lower is better)
Translates to: IRPNAKVLKICPTSQTREIWNLR*TVVPFD
Trigger: GTCAAATGGTACTACCGTCAATCTGAGGTTCCAGAT...TTCCCTTGTTTGGGAAGTGGGGCAGATCTTAAGAACTTTGGCATTTGGTCGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CAA 90 bp CTTTGGCAGGCATATGTCCTGGGTCACTTGTGTGCTGAGTTATTTGTATGGAATTACTGTTCAGCCTCCTaGTCTCAGGGTTATATCCTA +
Preference number: 5 (lower is better)
Translates to: LWQAYVLGHLCAELFVWNYCSAS*SQGYIL
Trigger: TAGGATATAACCCTGAGACAAGGAGGCTGAACAGTA...ATTCCATACAAATAACTCAGCACACAAGTGACCCAGGACATATGCCTGCCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
CDS-3UTR CAA 90 bp AGTGTGTGTACACAGAAATCTAGAAGGAAATCTACAATGGACACAGGCCCATGCCCATCATCCTCTTCCTaGACGGGTTTGAACATAAAC +
Preference number: 5 (lower is better)
Translates to: SVCTQKSRRKSTMDTGPCPSSSS*TGLNIN
Trigger: GTTTATGTTCAAACCCGTCAAGGAAGAGGATGATGG...GCATGGGCCTGTGTCCATTGTAGATTTCCTTCTAGATTTCTGTGTACACACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTGAGCGGATGTCTTCATaGATGGGTGAGGTGCGACCA +
Preference number: 5 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVERMSS*MGEVRP
Trigger: TGGTCGCACCTCACCCATCAATGAAGACATCCGCTC...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTTCCTGGTCGATGTCTTaGGGGTCACTGCTACCCTCA +
Preference number: 5 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVSWSMS*GSLLPS
Trigger: TGAGGGTAGCAGTGACCCCAAAGACATCGACCAGGA...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTTCTTCCTTGACGGGTTaGAACATAAACGGTGGCGGG +
Preference number: 5 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVSSLTG*NINGGG
Trigger: CCCGCCACCGTTTATGTTCAAACCCGTCAAGGAAGA...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp TCTCAGGAAATCCTCTCGACAAACGAACACTACTATGTGGATACATTTTTAGTTTGCGTTTTTGTCTTCTaGGAGCTGGTCCTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: SQEILSTNEHYYVDTFLVCVFVF*ELVLSA
Trigger: GGCTGACAGGACCAGCTCCAAGAAGACAAAAACGCA...AACTAAAAATGTATCCACATAGTAGTGTTCGTTTGTCGAGAGGATTTCCTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCTCTCAGCGCTTCGCCTaGGGATATGGGGAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFSQRFA*GYGEKS
Trigger: GCTTTTCTCCCCATATCCCAAGGCGAAGCGCTGAGA...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp TATTTGAGATGCTATGAAGGAGAAACCTCAACAAGTGCTGTTAGATTTCACTTTACTTGGGCCAGCACATaGCAGATGCTCAACAGCCAC +
Preference number: 5 (lower is better)
Translates to: YLRCYEGETSTSAVRFHFTWAST*QMLNSH
Trigger: GTGGCTGTTGAGCATCTGCAATGTGCTGGCCCAAGT...AAAGTGAAATCTAACAGCACTTGTTGAGGTTTCTCCTTCATAGCATCTCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS-3UTR CAA 90 bp ATTCATCCAGAACAATCAAGTGTGTGTACACAGAAATCTAGAAGGAAATCTACATCTTCCTTGACGGGTTaGAACATAAACGGTGGCGGG +
Preference number: 5 (lower is better)
Translates to: IHPEQSSVCTQKSRRKSTSSLTG*NINGGG
Trigger: CCCGCCACCGTTTATGTTCAAACCCGTCAAGGAAGA...TGTAGATTTCCTTCTAGATTTCTGTGTACACACACTTGATTGTTCTGGATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS-3UTR CAA 90 bp ATTTACAGACGTAAAAAGCCATGCTGCAGAACTTTCTCCAATTATGAAGATTTCTGCGTTTTTGTCTTCTaGGAGCTGGTCCTGTCAGCC +
Preference number: 5 (lower is better)
Translates to: IYRRKKPCCRTFSNYEDFCVFVF*ELVLSA
Trigger: GGCTGACAGGACCAGCTCCAAGAAGACAAAAACGCA...GAAATCTTCATAATTGGAGAAAGTTCTGCAGCATGGCTTTTTACGTCTGTAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp ACAGTGAAGGGTGTGAACTGGATTCTAGCACCTACTGAGAAATCAAGGAAAAGATGGAAATGTCGCTATTaGACGCCAGAACCTGAATTT +
Preference number: 5 (lower is better)
Translates to: TVKGVNWILAPTEKSRKRWKCRY*TPEPEF
Trigger: AAATTCAGGTTCTGGCGTCAAATAGCGACATTTCCA...TCTTTTCCTTGATTTCTCAGTAGGTGCTAGAATCCAGTTCACACCCTTCACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
CDS CCA 90 bp ATTTTCATTATGTCGATCCTGAACCAAATGCTGATACACAGAATCTaGAACCTCAGATTGACGGTAGTACCATTTGACGTTCATGAGGAG +
Preference number: 5 (lower is better)
Translates to: IFIMSILNQMLIHRI*NLRLTVVPFDVHEE
Trigger: CTCCTCATGAACGTCAAATGGTACTACCGTCAATCTGAGGTTCCAGATTCTGTGTATCAGCATTTGGTTCAGGATCGACATAATGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
ENST00000469251.1
ENST00000480342.5
ENST00000514428.1
ENST00000656437.1
ENST00000659924.1
CDS-3UTR CAA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGTCCCCTGTTTCCTTATaGGGAAGCAGCTCCTTTCTA +
Preference number: 5 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWSPVSL*GSSSFL
Trigger: TAGAAAGGAGCTGCTTCCCAATAAGGAAACAGGGGA...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp AATCAACTCTGTATTCTGTCAATAGTTGGTAGGAATTCACAATTAGTGACATGGAATAATCTTCCTGACTaGGTAGGTGGCCACCATGCA +
Preference number: 5 (lower is better)
Translates to: NQLCILSIVGRNSQLVTWNNLPD*VGGHHA
Trigger: TGCATGGTGGCCACCTACCAAGTCAGGAAGATTATT...CCATGTCACTAATTGTGAATTCCTACCAACTATTGACAGAATACAGAGTTGATT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS-3UTR CAA 90 bp TATTTGAGATGCTATGAAGGAGAAACCTCAACAAGTGCTGTTAGATTTCACTTTCCAGTGGTTACCACATaGGAAAGCACAGGTCTAGAA +
Preference number: 5 (lower is better)
Translates to: YLRCYEGETSTSAVRFHFPVVTT*ESTGLE
Trigger: TTCTAGACCTGTGCTTTCCAATGTGGTAACCACTGG...AAAGTGAAATCTAACAGCACTTGTTGAGGTTTCTCCTTCATAGCATCTCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS CCA 90 bp AGTGTCAACGTAATCAGAAATGAAGAGCTCTCGGTTCTTGATAACTaGGTCTGTAATGACAAGTTCTCTTCCAGAGTCATTTTCATTATG +
Preference number: 5 (lower is better)
Translates to: SVNVIRNEELSVLDN*VCNDKFSSRVIFIM
Trigger: CATAATGAAAATGACTCTGGAAGAGAACTTGTCATTACAGACCCAGTTATCAAGAACCGAGAGCTCTTCATTTCTGATTACGTTGACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
ENST00000469251.1
ENST00000480342.5
ENST00000514428.1
ENST00000656437.1
ENST00000659924.1
CDS-3UTR CAA 90 bp AAGCCAAACCTCAGTCATAATGCAGATCCCTGTCTAACAGGTGATCATTGTTTTCTTCCTGCTCAGTCTTaGAAATCAGTGTGTATTTTA +
Preference number: 5 (lower is better)
Translates to: KPNLSHNADPCLTGDHCFLPAQS*KSVCIL
Trigger: TAAAATACACACTGATTTCAAAGACTGAGCAGGAAG...AAAACAATGATCACCTGTTAGACAGGGATCTGCATTATGACTGAGGTTTGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS TCA 72 bp CCCAGCGGGGCGAGCGTCTCGGGGTGTGCGGGAGGCTaGGGAGGCTCCGGAGCGCGGAGGGTTGCTCGCGAG +
Preference number: 6 (lower is better)
Translates to: PSGASVSGCAGG*GGSGARRVARE
Trigger: CTCGCGAGCAACCCTCCGCGCTCCGGAGCCTCCTCAGCCTCCCGCACACCCCGAGACGCTCGCCCCGCTGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000400908.7
CDS GCA 72 bp GGCCTGGGAGGCCGTGGGGGAGCCCTGTGGGGGAACTaGAGTGGCAGAGGGCGTGGGCCCTGGCGTGGGCAG +
Preference number: 6 (lower is better)
Translates to: GLGGRGGALWGN*SGRGRGPWRGQ
Trigger: CTGCCCACGCCAGGGCCCACGCCCTCTGCCACTGCAGTTCCCCCACAGGGCTCCCCCACGGCCTCCCAGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS CCA 72 bp CTGCCTCCTGAAGCCGCCGCACCAGAGCAGGGTGGCTaGGCCGAGGTGCCAGGTCCCGCCGGTGGGGTAGAG +
Preference number: 6 (lower is better)
Translates to: LPPEAAAPEQGG*AEVPGPAGGVE
Trigger: CTCTACCCCACCGGCGGGACCTGGCACCTCGGCCCAGCCACCCTGCTCTGGTGCGGCGGCTTCAGGAGGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS CCA 72 bp GAGGGCGGCCGCTGGGGGTGCAAGGCCGGTGCCTGTTaGATGTGGGTGTGGGGAACAGGCGCTGTGGGAGCC +
Preference number: 6 (lower is better)
Translates to: EGGRWGCKAGAC*MWVWGTGAVGA
Trigger: GGCTCCCACAGCGCCTGTTCCCCACACCCACATCCAACAGGCACCGGCCTTGCACCCCCAGCGGCCGCCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS CCA 72 bp TTCCCAGGCTGCTGGGTCTCCAGCCCACGTTCCGGATaGACGAAGTCGGCTGCGCCCCGGCCGCACGCCCTC +
Preference number: 6 (lower is better)
Translates to: FPGCWVSSPRSG*TKSAAPRPHAL
Trigger: GAGGGCGTGCGGCCGGGGCGCAGCCGACTTCGTCCATCCGGAACGTGGGCTGGAGACCCAGCAGCCTGGGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465125.1
CDS TCA 72 bp GTTTCAAAAATGCTGCGGCCCGCTGGCGGCGAGAGCTaGGCCCGCGGGCCTGGTCCTCCTCCTCCGGCGCAG +
Preference number: 6 (lower is better)
Translates to: VSKMLRPAGGES*ARGPGPPPPAQ
Trigger: CTGCGCCGGAGGAGGAGGACCAGGCCCGCGGGCTCAGCTCTCGCCGCCAGCGGGCCGCAGCATTTTTGAAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468247.1
CDS CCA 72 bp AGGGCGCCCACAGGGCTGGGGCCCTTCCCAGGCTGCTaGGTCTCCAGCCCACGTTCCGGATGGACGAAGTCG +
Preference number: 6 (lower is better)
Translates to: RAPTGLGPFPGC*VSSPRSGWTKS
Trigger: CGACTTCGTCCATCCGGAACGTGGGCTGGAGACCCAGCAGCCTGGGAAGGGCCCCAGCCCTGTGGGCGCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465125.1
CDS GCA 72 bp ATGTGGGGCATGGCCAAGGGCGCTGGTGGCAGGGGCTaGTCCCGTGGAGGCTGTTGGGACTGCAGCGCTGAC +
Preference number: 6 (lower is better)
Translates to: MWGMAKGAGGRG*SRGGCWDCSAD
Trigger: GTCAGCGCTGCAGTCCCAACAGCCTCCACGGGAGCAGCCCCTGCCACCAGCGCCCTTGGCCATGCCCCACAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS TCA 72 bp GGGCTGCTCCCGTGGAGGCTGTTGGGACTGCAGCGCTaGCTGAGAGGCTGGCAGCTGCAGGGAGGTGTGAGG +
Preference number: 6 (lower is better)
Translates to: GLLPWRLLGLQR*LRGWQLQGGVR
Trigger: CCTCACACCTCCCTGCAGCTGCCAGCCTCTCAGTCAGCGCTGCAGTCCCAACAGCCTCCACGGGAGCAGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS CCA 72 bp TTGGCATTCATGGAGAAGGGTGAGGGCCCCGAGAGGTaGGGAGGGTGCTTGTGGGCCTGTGGCGCCGGCAGC +
Preference number: 6 (lower is better)
Translates to: LAFMEKGEGPER*GGCLWACGAGS
Trigger: GCTGCCGGCGCCACAGGCCCACAAGCACCCTCCCCACCTCTCGGGGCCCTCACCCTTCTCCATGAATGCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS CCA 72 bp GGATCTCCCGCTCCCGGAGCTCCCGCTCGCGGATGGTaGGGTCGACGTTGTAGAGGCCAGGCATGTGGTAGG +
Preference number: 6 (lower is better)
Translates to: GSPAPGAPARGW*GRRCRGQACGR
Trigger: CCTACCACATGCCTGGCCTCTACAACGTCGACCCCACCATCCGCGAGCGGGAGCTCCGGGAGCGGGAGATCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS CCA 72 bp CTCGGATCTCCCGCTCCCGGAGCTCCCGCTCGCGGATaGTGGGGTCGACGTTGTAGAGGCCAGGCATGTGGT +
Preference number: 6 (lower is better)
Translates to: LGSPAPGAPARG*WGRRCRGQACG
Trigger: ACCACATGCCTGGCCTCTACAACGTCGACCCCACCATCCGCGAGCGGGAGCTCCGGGAGCGGGAGATCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS TCA 72 bp TCTCAGGCTCCTCAGCGTCGTCCAGAGCCTCCTCCTTaGTCTGGACGGTGGGGAGTGGGCAGGACGACCCCC +
Preference number: 6 (lower is better)
Translates to: SQAPQRRPEPPP*SGRWGVGRTTP
Trigger: GGGGGTCGTCCTGCCCACTCCCCACCGTCCAGATCAAGGAGGAGGCTCTGGACGACGCTGAGGAGCCTGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS TCA 72 bp ACTGAGCTGTGGGTCACTGAGGCGACCTTCATGCGCTaGGCTGGACGCCTTAGCCGCCCGCTCTGCCTCGCG +
Preference number: 6 (lower is better)
Translates to: TELWVTEATFMR*AGRLSRPLCLA
Trigger: CGCGAGGCAGAGCGGGCGGCTAAGGCGTCCAGCTCAGCGCATGAAGGTCGCCTCAGTGACCCACAGCTCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS GCA 72 bp GCAGTCGGGCCAGGGGATCGCTGGTCAGCGATGCCATaGGCTCTGCGTGGATACGCTCGGCTGCCAGTCTGT +
Preference number: 6 (lower is better)
Translates to: AVGPGDRWSAMP*ALRGYARLPVC
Trigger: ACAGACTGGCAGCCGAGCGTATCCACGCAGAGCGCATGGCATCGCTGACCAGCGATCCCCTGGCCCGACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS GCA 72 bp CATCTGCAGTCGGGCCAGGGGATCGCTGGTCAGCGATaGCATGCGCTCTGCGTGGATACGCTCGGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: HLQSGQGIAGQR*HALCVDTLGCQ
Trigger: CTGGCAGCCGAGCGTATCCACGCAGAGCGCATGGCATCGCTGACCAGCGATCCCCTGGCCCGACTGCAGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS GCA 72 bp CGAGTCTTAATCCTCCTGAACACGGCCTGCCTGCGGTaGCTACGATGGGCTCGGGAGCTGGCTGCTTCGGGG +
Preference number: 6 (lower is better)
Translates to: RVLILLNTACLR*LRWARELAASG
Trigger: CCCCGAAGCAGCCAGCTCCCGAGCCCATCGTAGGCACCGCAGGCAGGCCGTGTTCAGGAGGATTAAGACTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000460659.5
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS GCA 72 bp GACGCGGTGCGAGTCTTAATCCTCCTGAACACGGCCTaGCTGCGGTGCCTACGATGGGCTCGGGAGCTGGCT +
Preference number: 6 (lower is better)
Translates to: DAVRVLILLNTA*LRCLRWARELA
Trigger: AGCCAGCTCCCGAGCCCATCGTAGGCACCGCAGGCAGGCCGTGTTCAGGAGGATTAAGACTCGCACCGCGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000460659.5
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS GCA 72 bp CAGCGATGCCATGCGCTCTGCGTGGATACGCTCGGCTaGCAGTCTGTCAGGGTAGCTCATCTCGGGCCGCAG +
Preference number: 6 (lower is better)
Translates to: QRCHALCVDTLG*QSVRVAHLGPQ
Trigger: CTGCGGCCCGAGATGAGCTACCCTGACAGACTGGCAGCCGAGCGTATCCACGCAGAGCGCATGGCATCGCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS GCA 72 bp GGCCAGGGGATCGCTGGTCAGCGATGCCATGCGCTCTaGGTGGATACGCTCGGCTGCCAGTCTGTCAGGGTA +
Preference number: 6 (lower is better)
Translates to: GQGIAGQRCHAL*VDTLGCQSVRV
Trigger: TACCCTGACAGACTGGCAGCCGAGCGTATCCACGCAGAGCGCATGGCATCGCTGACCAGCGATCCCCTGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS CCA 72 bp ATCCTCCTGAACACGGCCTGCCTGCGGTGCCTACGATaGGCTCGGGAGCTGGCTGCTTCGGGGGTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: ILLNTACLRCLR*ARELAASGVFF
Trigger: GAAGAAGACCCCCGAAGCAGCCAGCTCCCGAGCCCATCGTAGGCACCGCAGGCAGGCCGTGTTCAGGAGGAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000460659.5
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS CAA 72 bp CTGGGGGAGTTCCGGCCGCTGGAGCGGATGTCTTCATaGATGGGTGAGGTGCGACCATCAGGGCTGGCTGGC +
Preference number: 6 (lower is better)
Translates to: LGEFRPLERMSS*MGEVRPSGLAG
Trigger: GCCAGCCAGCCCTGATGGTCGCACCTCACCCATCAATGAAGACATCCGCTCCAGCGGCCGGAACTCCCCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000505225.1
ENST00000656437.1
CDS CAA 90 bp CTGGCAGCGCTGGGGGAGTTCCGGCCGCTGGAGCGGATGTCTTCATaGATGGGTGAGGTGCGACCATCAGGGCTGGCTGGCTGCTTCTTC +
Preference number: 6 (lower is better)
Translates to: LAALGEFRPLERMSS*MGEVRPSGLAGCFF
Trigger: GAAGAAGCAGCCAGCCAGCCCTGATGGTCGCACCTCACCCATCAATGAAGACATCCGCTCCAGCGGCCGGAACTCCCCCAGCGCTGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000505225.1
ENST00000656437.1
CDS TCA 72 bp TGGGGGAGTTCCGGCCGCTGGAGCGGATGTCTTCATTaGTGGGTGAGGTGCGACCATCAGGGCTGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: WGSSGRWSGCLH*WVRCDHQGWLA
Trigger: AGCCAGCCAGCCCTGATGGTCGCACCTCACCCATCAATGAAGACATCCGCTCCAGCGGCCGGAACTCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000505225.1
ENST00000656437.1
CDS TCA 72 bp GCATGTAGAAGGGGTGGTTGCGGTTGGTGGGCGACATaGCGTGGGGCCGGGCGTACTCGCTCAGAGTCCGAA +
Preference number: 6 (lower is better)
Translates to: ACRRGGCGWWAT*RGAGRTRSESE
Trigger: TTCGGACTCTGAGCGAGTACGCCCGGCCCCACGTCATGTCGCCCACCAACCGCAACCACCCCTTCTACATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS CCA 72 bp GGGCTTTCTGCTCAGCCTCGCGCTTGGCCTTCTCAATaGCCTCCTCCCTCTTCTTGGCCAGCTTGGACCCGG +
Preference number: 6 (lower is better)
Translates to: GLSAQPRAWPSQ*PPPSSWPAWTR
Trigger: CCGGGTCCAAGCTGGCCAAGAAGAGGGAGGAGGCCATTGAGAAGGCCAAGCGCGAGGCTGAGCAGAAAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS CCA 72 bp CCGTGGTGCCAATCTTTGGAGGTGGTGGTGAAGCAGTaGCGGCAGGCGTACCCCTTCAGCTCCTGCTCACTG +
Preference number: 6 (lower is better)
Translates to: PWCQSLEVVVKQ*RQAYPFSSCSL
Trigger: CAGTGAGCAGGAGCTGAAGGGGTACGCCTGCCGCCACTGCTTCACCACCACCTCCAAAGATTGGCACCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000464367.1
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS CCA 72 bp CTCGCTCCTCTCGGGCTTTCTGCTCAGCCTCGCGCTTaGCCTTCTCAATGGCCTCCTCCCTCTTCTTGGCCA +
Preference number: 6 (lower is better)
Translates to: LAPLGLSAQPRA*PSQWPPPSSWP
Trigger: TGGCCAAGAAGAGGGAGGAGGCCATTGAGAAGGCCAAGCGCGAGGCTGAGCAGAAAGCCCGAGAGGAGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS CCA 72 bp GGGCCAAGGAAGAAGTCTCGCTTTGACCAGGTCCCATaGCCTCTGCTGTGCCTCGTCCCAGCATCTGCGGTG +
Preference number: 6 (lower is better)
Translates to: GPRKKSRFDQVP*PLLCLVPASAV
Trigger: CACCGCAGATGCTGGGACGAGGCACAGCAGAGGCCATGGGACCTGGTCAAAGCGAGACTTCTTCCTTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS TCA 72 bp GTTCCGGCCGCTGGAGCGGATGTCTTCATTGATGGGTaGGGTGCGACCATCAGGGCTGGCTGGCTGCTTCTT +
Preference number: 6 (lower is better)
Translates to: VPAAGADVFIDG*GATIRAGWLLL
Trigger: AAGAAGCAGCCAGCCAGCCCTGATGGTCGCACCTCACCCATCAATGAAGACATCCGCTCCAGCGGCCGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000505225.1
ENST00000656437.1
CDS TCA 72 bp CTCCTGCCTGGCGCTGCCACGGACAGCCATTCTGCATaGCTGAAGCTTCTGCTTTCCCTGAGCAGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: LLPGAATDSHSA*LKLLLSLSSRE
Trigger: CTCCCTGCTGCTCAGGGAAAGCAGAAGCTTCAGTCATGCAGAATGGCTGTCCGTGGCAGCGCCAGGCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS CCA 72 bp CCCGGGGCTGGTCCCAGGAAGTATTGTTCCCGGCCCTaGTTTGCTGGTTTTTCTGGCTTGTGGCTGGCCATG +
Preference number: 6 (lower is better)
Translates to: PGAGPRKYCSRP*FAGFSGLWLAM
Trigger: CATGGCCAGCCACAAGCCAGAAAAACCAGCAAACCAGGGCCGGGAACAATACTTCCTGGGACCAGCCCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CAA 72 bp ACCACTTCGTCCTCGGTCCAGCACTTCTCGATGAGCTaGGGCACAGGCTTCTTCACCAGGCGCTGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: TTSSSVQHFSMS*GTGFFTRRCRA
Trigger: AGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGACCGAGGACGAAGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS CAA 72 bp TCCACTTCGTCCTCGGTCCAGCACTTCTCGATGAGCTaGGGCACAGGCTTCTTCACCAGGCGCTGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: STSSSVQHFSMS*GTGFFTRRCRA
Trigger: AGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGACCGAGGACGAAGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS CAA 90 bp GGCGGGTCCACGGGCTTCTCAATGGGCGGGAGCTCACCGTATTTCTaGAAGTGGATGCGACAGTCGGTGCAAAGCAGGATGTTCTCCCGG +
Preference number: 6 (lower is better)
Translates to: GGSTGFSMGGSSPYF*KWMRQSVQSRMFSR
Trigger: CCGGGAGAACATCCTGCTTTGCACCGACTGTCGCATCCACTTCAAGAAATACGGTGAGCTCCCGCCCATTGAGAAGCCCGTGGACCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000464367.1
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS CAA 90 bp TTCCTGCTCACCACTTCGTCCTCGGTCCAGCACTTCTCGATGAGCTaGGGCACAGGCTTCTTCACCAGGCGCTGCAGGGCTTTGCCAGCA +
Preference number: 6 (lower is better)
Translates to: FLLTTSSSVQHFSMS*GTGFFTRRCRALPA
Trigger: TGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGACCGAGGACGAAGTGGTGAGCAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS TCA 72 bp TGCTCACCACTTCGTCCTCGGTCCAGCACTTCTCGATaGGCTTGGGCACAGGCTTCTTCACCAGGCGCTGCA +
Preference number: 6 (lower is better)
Translates to: CSPLRPRSSTSR*AWAQASSPGAA
Trigger: TGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGACCGAGGACGAAGTGGTGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS TCA 72 bp GGCTTCTCACAGCCTCTCCGGTTGTTCCGCAGCTTATaGCTGAGCAGCTTGGGCGGCTTCTGCCAACTCCTC +
Preference number: 6 (lower is better)
Translates to: GFSQPLRLFRSL*LSSLGGFCQLL
Trigger: GAGGAGTTGGCAGAAGCCGCCCAAGCTGCTCAGTCATAAGCTGCGGAACAACCGGAGAGGCTGTGAGAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS TCA 72 bp CTCACTCCACTTCGTCCTCGGTCCAGCACTTCTCGATaGGCTTGGGCACAGGCTTCTTCACCAGGCGCTGCA +
Preference number: 6 (lower is better)
Translates to: LTPLRPRSSTSR*AWAQASSPGAA
Trigger: TGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGACCGAGGACGAAGTGGAGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS GCA 72 bp TTGATGGGTGAGGTGCGACCATCAGGGCTGGCTGGCTaGTTCTTCCGACCACTGCGTAGTGTCGACATCGAG +
Preference number: 6 (lower is better)
Translates to: LMGEVRPSGLAG*FFRPLRSVDIE
Trigger: CTCGATGTCGACACTACGCAGTGGTCGGAAGAAGCAGCCAGCCAGCCCTGATGGTCGCACCTCACCCATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000656437.1
CDS GCA 72 bp CATCCTCCTGCCTGGCGCTGCCACGGACAGCCATTCTaGATGACTGAAGCTTCTGCTTTCCCTGAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: HPPAWRCHGQPF*MTEASAFPEQQ
Trigger: CTGCTGCTCAGGGAAAGCAGAAGCTTCAGTCATGCAGAATGGCTGTCCGTGGCAGCGCCAGGCAGGAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS GCA 72 bp TTTTTCTGGCTTGTGGCTGGCCATGCCACACACAGCTaGACCTGCTCTGCGGCTTTGCTTCCCAGTGAGGCG +
Preference number: 6 (lower is better)
Translates to: FFWLVAGHATHS*TCSAALLPSEA
Trigger: CGCCTCACTGGGAAGCAAAGCCGCAGAGCAGGTGCAGCTGTGTGTGGCATGGCCAGCCACAAGCCAGAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CCA 72 bp CAGTCGGTGCAAAGCAGGATGTTCTCCCGGCCTCCGTaGTGCCAATCTTTGGAGGTGGTGGTGAAGCAGTGG +
Preference number: 6 (lower is better)
Translates to: QSVQSRMFSRPP*CQSLEVVVKQW
Trigger: CCACTGCTTCACCACCACCTCCAAAGATTGGCACCACGGAGGCCGGGAGAACATCCTGCTTTGCACCGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000464367.1
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS CCA 72 bp CTGCTTTACTGTCATTGCTGGAGGTACTGGCAGCGCTaGGGGAGTTCCGGCCGCTGGAGCGGATGTCTTCAT +
Preference number: 6 (lower is better)
Translates to: LLYCHCWRYWQR*GSSGRWSGCLH
Trigger: ATGAAGACATCCGCTCCAGCGGCCGGAACTCCCCCAGCGCTGCCAGTACCTCCAGCAATGACAGTAAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000505225.1
ENST00000656437.1
CDS CCA 72 bp CTCTGCCATGCTCATTTCCAAAGTGGTCCCCGGGGCTaGTCCCAGGAAGTATTGTTCCCGGCCCTGGTTTGC +
Preference number: 6 (lower is better)
Translates to: LCHAHFQSGPRG*SQEVLFPALVC
Trigger: GCAAACCAGGGCCGGGAACAATACTTCCTGGGACCAGCCCCGGGGACCACTTTGGAAATGAGCATGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CAA 72 bp TTCACTTCGTCCTCGGTCCAGCACTTCTCGATGAGCTaGGGCACAGGCTTCTTCACCAGGCGCTGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: FTSSSVQHFSMS*GTGFFTRRCRA
Trigger: AGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGACCGAGGACGAAGTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000464972.5
ENST00000656437.1
CDS CAA 72 bp GGGCTGGTCCCAGGAAGTATTGTTCCCGGCCCTGGTTaGCTGGTTTTTCTGGCTTGTGGCTGGCCATGCCAC +
Preference number: 6 (lower is better)
Translates to: GLVPGSIVPGPG*LVFLACGWPCH
Trigger: GTGGCATGGCCAGCCACAAGCCAGAAAAACCAGCAAACCAGGGCCGGGAACAATACTTCCTGGGACCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CAA 90 bp ACGAAGCGTTTCACTTCGTCCTCGGTCCAGCACTTCTCGATGAGCTaGGGCACAGGCTTCTTCACCAGGCGCTGCAGGGCTTTGCCAGCA +
Preference number: 6 (lower is better)
Translates to: TKRFTSSSVQHFSMS*GTGFFTRRCRALPA
Trigger: TGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGACCGAGGACGAAGTGAAACGCTTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000464972.5
ENST00000656437.1
CDS CAA 90 bp ACAGGCAAGCTACCGCCTCGGGCAAAGCAGCTCCCCTCCAGGACTTaGTCTGGTAAACAAGACTTTCGCTTCCTCCCCCTGGGAGGCTCA +
Preference number: 6 (lower is better)
Translates to: TGKLPPRAKQLPSRT*SGKQDFRFLPLGGS
Trigger: TGAGCCTCCCAGGGGGAGGAAGCGAAAGTCTTGTTTACCAGACAAAGTCCTGGAGGGGAGCTGCTTTGCCCGAGGCGGTAGCTTGCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464367.1
CDS CAA 90 bp AGATCTCACTCCACTTCGTCCTCGGTCCAGCACTTCTCGATGAGCTaGGGCACAGGCTTCTTCACCAGGCGCTGCAGGGCTTTGCCAGCA +
Preference number: 6 (lower is better)
Translates to: RSHSTSSSVQHFSMS*GTGFFTRRCRALPA
Trigger: TGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGACCGAGGACGAAGTGGAGTGAGATCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000659924.1
CDS TCA 72 bp AGCGTTTCACTTCGTCCTCGGTCCAGCACTTCTCGATaGGCTTGGGCACAGGCTTCTTCACCAGGCGCTGCA +
Preference number: 6 (lower is better)
Translates to: SVSLRPRSSTSR*AWAQASSPGAA
Trigger: TGCAGCGCCTGGTGAAGAAGCCTGTGCCCAAGCTCATCGAGAAGTGCTGGACCGAGGACGAAGTGAAACGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000464972.5
ENST00000656437.1
CDS TCA 72 bp GAATGTGAGAGTGCTGGTGATGGTGCGGAGTCACGTTaGACATCTGCAGTCGGGCCAGGGGATCGCTGGTCA +
Preference number: 6 (lower is better)
Translates to: ECESAGDGAESR*TSAVGPGDRWS
Trigger: TGACCAGCGATCCCCTGGCCCGACTGCAGATGTTCAACGTGACTCCGCACCATCACCAGCACTCTCACATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
CDS TCA 72 bp GTGTCGAGCAGAAAGGGGAAACAGAACCAAACCCGGTaGCTCTTCTCCAGAAGGGAACCCTCGGGGCTCCCA +
Preference number: 6 (lower is better)
Translates to: VSSRKGKQNQTR*LFSRREPSGLP
Trigger: TGGGAGCCCCGAGGGTTCCCTTCTGGAGAAGAGTCACCGGGTTTGGTTCTGTTTCCCCTTTCTGCTCGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492766.5
CDS GCA 72 bp GTGAAGCAGTGGCGGCAGGCGTACCCCTTCAGCTCCTaGTCACTGTCCTCACTGTCGAAGTCATCTTCACTG +
Preference number: 6 (lower is better)
Translates to: VKQWRQAYPFSS*SLSSLSKSSSL
Trigger: CAGTGAAGATGACTTCGACAGTGAGGACAGTGAGCAGGAGCTGAAGGGGTACGCCTGCCGCCACTGCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000464367.1
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS GCA 72 bp CTTGGAGAGCCTGCACTGAGCCAGAAGCTAAGAGCTTaGTACAAAACCCAGAGCAGGATGCCACCCTGGGGC +
Preference number: 6 (lower is better)
Translates to: LGEPALSQKLRA*YKTQSRMPPWG
Trigger: GCCCCAGGGTGGCATCCTGCTCTGGGTTTTGTAGCAAGCTCTTAGCTTCTGGCTCAGTGCAGGCTCTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464367.1
CDS GCA 72 bp GGCTGGTCCCAGGAAGTATTGTTCCCGGCCCTGGTTTaGTGGTTTTTCTGGCTTGTGGCTGGCCATGCCACA +
Preference number: 6 (lower is better)
Translates to: GWSQEVLFPALV*WFFWLVAGHAT
Trigger: TGTGGCATGGCCAGCCACAAGCCAGAAAAACCAGCAAACCAGGGCCGGGAACAATACTTCCTGGGACCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CCA 72 bp AGCTCCATTCATCTCACCGAGCTTTGCCCAGAGCTCTaGGCTGGCTTCACTCTGGCTCTGAGTCCCTGTGAG +
Preference number: 6 (lower is better)
Translates to: SSIHLTELCPEL*AGFTLALSPCE
Trigger: CTCACAGGGACTCAGAGCCAGAGTGAAGCCAGCCCAGAGCTCTGGGCAAAGCTCGGTGAGATGAATGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CAA 72 bp TCCAAGAATTCACTGGACGGGGGTCTGGAGGGTGTGTaGACGGGTGTGGACGCGGTGCGAGTCTTAATCCTC +
Preference number: 6 (lower is better)
Translates to: SKNSLDGGLEGV*TGVDAVRVLIL
Trigger: GAGGATTAAGACTCGCACCGCGTCCACACCCGTCAACACACCCTCCAGACCCCCGTCCAGTGAATTCTTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS CAA 72 bp CTACCGCCTCGGGCAAAGCAGCTCCCCTCCAGGACTTaGTCTGGTAAACAAGACTTTCGCTTCCTCCCCCTG +
Preference number: 6 (lower is better)
Translates to: LPPRAKQLPSRT*SGKQDFRFLPL
Trigger: CAGGGGGAGGAAGCGAAAGTCTTGTTTACCAGACAAAGTCCTGGAGGGGAGCTGCTTTGCCCGAGGCGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464367.1
CDS CAA 72 bp CCTTGGAGAGCCTGCACTGAGCCAGAAGCTAAGAGCTaGCTACAAAACCCAGAGCAGGATGCCACCCTGGGG +
Preference number: 6 (lower is better)
Translates to: PWRACTEPEAKS*LQNPEQDATLG
Trigger: CCCCAGGGTGGCATCCTGCTCTGGGTTTTGTAGCAAGCTCTTAGCTTCTGGCTCAGTGCAGGCTCTCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464367.1
CDS CAA 90 bp GAACTTAGGTCCAAGAATTCACTGGACGGGGGTCTGGAGGGTGTGTaGACGGGTGTGGACGCGGTGCGAGTCTTAATCCTCCTGAACACG +
Preference number: 6 (lower is better)
Translates to: ELRSKNSLDGGLEGV*TGVDAVRVLILLNT
Trigger: CGTGTTCAGGAGGATTAAGACTCGCACCGCGTCCACACCCGTCAACACACCCTCCAGACCCCCGTCCAGTGAATTCTTGGACCTAAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS CAA 90 bp ATGCTATGCTTCCCACTGAGCCCATCATCCTCTTCCTTGACGGGTTaGAACATAAACGGTGGCGGGTCCACGGGCTTCTCAATGGGCGGG +
Preference number: 6 (lower is better)
Translates to: MLCFPLSPSSSSLTG*NINGGGSTGFSMGG
Trigger: CCCGCCCATTGAGAAGCCCGTGGACCCGCCACCGTTTATGTTCAAACCCGTCAAGGAAGAGGATGATGGGCTCAGTGGGAAGCATAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000464367.1
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS TCA 72 bp GTCACTGCTACCCTCATCGTTGACGCTGCGACTGTCTaGACTCTCTCCCTCACCTTCAGATGGCGAGTTGGG +
Preference number: 6 (lower is better)
Translates to: VTATLIVDAATV*TLSLTFRWRVG
Trigger: CCCAACTCGCCATCTGAAGGTGAGGGAGAGAGTTCAGACAGTCGCAGCGTCAACGATGAGGGTAGCAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000656437.1
CDS TCA 72 bp ACTTCCCCTCACTCTGACAGGACTGAGCATGTGCTGTaGCCCTCCCTCATCCACACACTGTCTCTCCACGAC +
Preference number: 6 (lower is better)
Translates to: TSPHSDRTEHVL*PSLIHTLSLHD
Trigger: GTCGTGGAGAGACAGTGTGTGGATGAGGGAGGGTCACAGCACATGCTCAGTCCTGTCAGAGTGAGGGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507012.1
CDS GCA 72 bp TGGGCACAGGCTTCTTCACCAGGCGCTGCAGGGCTTTaGCAGCATCGTAACCGCTTTCATGCAGTGTGTTCA +
Preference number: 6 (lower is better)
Translates to: WAQASSPGAAGL*QHRNRFHAVCS
Trigger: TGAACACACTGCATGAAAGCGGTTACGATGCTGGCAAAGCCCTGCAGCGCCTGGTGAAGAAGCCTGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000464972.5
ENST00000480342.5
ENST00000656437.1
ENST00000659924.1
CDS CCA 72 bp ATCATCCTCTTCCTTGACGGGTTTGAACATAAACGGTaGCGGGTCCACGGGCTTCTCAATGGGCGGGAGCTC +
Preference number: 6 (lower is better)
Translates to: IILFLDGFEHKR*RVHGLLNGREL
Trigger: GAGCTCCCGCCCATTGAGAAGCCCGTGGACCCGCCACCGTTTATGTTCAAACCCGTCAAGGAAGAGGATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000464367.1
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS CCA 72 bp TCAGCCTCCTCCGTATCAGAGGCCACCTTCTCCCGCTaGCGTTTGTTACTCTTAAGAGGGGAAGAGGCTTCC +
Preference number: 6 (lower is better)
Translates to: SASSVSEATFSR*RLLLLRGEEAS
Trigger: GGAAGCCTCTTCCCCTCTTAAGAGTAACAAACGCCAGCGGGAGAAGGTGGCCTCTGATACGGAGGAGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000505225.1
ENST00000656437.1
CDS CCA 72 bp TGGTCCCAGGAAGTATTGTTCCCGGCCCTGGTTTGCTaGTTTTTCTGGCTTGTGGCTGGCCATGCCACACAC +
Preference number: 6 (lower is better)
Translates to: WSQEVLFPALVC*FFWLVAGHATH
Trigger: GTGTGTGGCATGGCCAGCCACAAGCCAGAAAAACCAGCAAACCAGGGCCGGGAACAATACTTCCTGGGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CAA 90 bp CTGCTGTGCCTCGTCCCAGCATCTGCGGTGACACAGGAGAGAGTGTaGACAAGGATGTGCTGTCCGGGAATCTCCCTTTATCCAGTGACA +
Preference number: 6 (lower is better)
Translates to: LLCLVPASAVTQERV*TRMCCPGISLYPVT
Trigger: TGTCACTGGATAAAGGGAGATTCCCGGACAGCACATCCTTGTCAACACTCTCTCCTGTGTCACCGCAGATGCTGGGACGAGGCACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS TCA 72 bp CGGGCTTCTCAATGGGCGGGAGCTCACCGTATTTCTTaGAGTGGATGCGACAGTCGGTGCAAAGCAGGATGT +
Preference number: 6 (lower is better)
Translates to: RASQWAGAHRIS*SGCDSRCKAGC
Trigger: ACATCCTGCTTTGCACCGACTGTCGCATCCACTTCAAGAAATACGGTGAGCTCCCGCCCATTGAGAAGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000464367.1
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS TCA 72 bp GGTCGATGTCTTTGGGGTCACTGCTACCCTCATCGTTaGCGCTGCGACTGTCTGAACTCTCTCCCTCACCTT +
Preference number: 6 (lower is better)
Translates to: GRCLWGHCYPHR*RCDCLNSLPHL
Trigger: AAGGTGAGGGAGAGAGTTCAGACAGTCGCAGCGTCAACGATGAGGGTAGCAGTGACCCCAAAGACATCGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000656437.1
CDS GCA 72 bp ACAGCCGTCCTCTGTAGAGCCTCCATCACACATTCCTaGAAATGCCGCCATGCTCCTTGCTGCCCTCAAGTA +
Preference number: 6 (lower is better)
Translates to: TAVLCRASITHS*KCRHAPCCPQV
Trigger: TACTTGAGGGCAGCAAGGAGCATGGCGGCATTTGCAGGAATGTGTGATGGAGGCTCTACAGAGGACGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000464972.5
ENST00000480342.5
ENST00000656437.1
ENST00000659924.1
CDS GCA 72 bp TCAGCCAGGAAAAGGCACAGGGAACATTCTGGGAACTaGAAGGAGGACAGGGTGTGCAGAATGGAGTGCCAG +
Preference number: 6 (lower is better)
Translates to: SARKRHREHSGN*KEDRVCRMECQ
Trigger: CTGGCACTCCATTCTGCACACCCTGTCCTCCTTGCAGTTCCCAGAATGTTCCCTGTGCCTTTTCCTGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488215.5
CDS GCA 72 bp TTATCCAGTGACAGCTCCATTCATCTCACCGAGCTTTaGCCAGAGCTCTGGGCTGGCTTCACTCTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: LSSDSSIHLTEL*PELWAGFTLAL
Trigger: CAGAGCCAGAGTGAAGCCAGCCCAGAGCTCTGGGCAAAGCTCGGTGAGATGAATGGAGCTGTCACTGGATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CCA 72 bp AACCGCTTTCATGCAGTGTGTTCAGTGCATTCAGAGTaGTGTCATCCCGAGAGGCTGCGACACAGCCGTCCT +
Preference number: 6 (lower is better)
Translates to: NRFHAVCSVHSE*CHPERLRHSRP
Trigger: AGGACGGCTGTGTCGCAGCCTCTCGGGATGACACCACTCTGAATGCACTGAACACACTGCATGAAAGCGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000464972.5
ENST00000480342.5
ENST00000656437.1
ENST00000659924.1
CDS CCA 72 bp CTTTGTCTGGTAAACAAGACTTTCGCTTCCTCCCCCTaGGAGGCTCAAGCCCCCACACATCCCAGGAAACTG +
Preference number: 6 (lower is better)
Translates to: LCLVNKTFASSP*EAQAPTHPRKL
Trigger: CAGTTTCCTGGGATGTGTGGGGGCTTGAGCCTCCCAGGGGGAGGAAGCGAAAGTCTTGTTTACCAGACAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000464367.1
CDS CAA 72 bp ACGGGCTTCTCAATGGGCGGGAGCTCACCGTATTTCTaGAAGTGGATGCGACAGTCGGTGCAAAGCAGGATG +
Preference number: 6 (lower is better)
Translates to: TGFSMGGSSPYF*KWMRQSVQSRM
Trigger: CATCCTGCTTTGCACCGACTGTCGCATCCACTTCAAGAAATACGGTGAGCTCCCGCCCATTGAGAAGCCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000464367.1
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS CAA 72 bp TTCCCACTGAGCCCATCATCCTCTTCCTTGACGGGTTaGAACATAAACGGTGGCGGGTCCACGGGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: FPLSPSSSSLTG*NINGGGSTGFS
Trigger: TGAGAAGCCCGTGGACCCGCCACCGTTTATGTTCAAACCCGTCAAGGAAGAGGATGATGGGCTCAGTGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000464367.1
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS CAA 72 bp TCCTCCGTATCAGAGGCCACCTTCTCCCGCTGGCGTTaGTTACTCTTAAGAGGGGAAGAGGCTTCCTCCTTC +
Preference number: 6 (lower is better)
Translates to: SSVSEATFSRWR*LLLRGEEASSF
Trigger: GAAGGAGGAAGCCTCTTCCCCTCTTAAGAGTAACAAACGCCAGCGGGAGAAGGTGGCCTCTGATACGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000505225.1
ENST00000656437.1
CDS CAA 72 bp GAGTTGGGCCTGCTGATCTCCTGCGTTTTTGTCTTCTaGGAGCTGGTCCTGTCAGCCTCCTCCGTATCAGAG +
Preference number: 6 (lower is better)
Translates to: ELGLLISCVFVF*ELVLSASSVSE
Trigger: CTCTGATACGGAGGAGGCTGACAGGACCAGCTCCAAGAAGACAAAAACGCAGGAGATCAGCAGGCCCAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000505225.1
ENST00000656437.1
CDS CAA 72 bp TGGTCGATGTCTTTGGGGTCACTGCTACCCTCATCGTaGACGCTGCGACTGTCTGAACTCTCTCCCTCACCT +
Preference number: 6 (lower is better)
Translates to: WSMSLGSLLPSS*TLRLSELSPSP
Trigger: AGGTGAGGGAGAGAGTTCAGACAGTCGCAGCGTCAACGATGAGGGTAGCAGTGACCCCAAAGACATCGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000476556.5
ENST00000656437.1
CDS TCA 72 bp CAGTCCCAGCTACTTAAGAAGCTGGGGCAAGAGGACTaGTGGAGCCCAGGAGTTCAAAACCAGCCTGAGCAA +
Preference number: 6 (lower is better)
Translates to: QSQLLKKLGQED*WSPGVQNQPEQ
Trigger: TTGCTCAGGCTGGTTTTGAACTCCTGGGCTCCATCAGTCCTCTTGCCCCAGCTTCTTAAGTAGCTGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS TCA 72 bp AAGAAATCAAAATGGGCCAAGGAAGAAGTCTCGCTTTaGCCAGGTCCCATGGCCTCTGCTGTGCCTCGTCCC +
Preference number: 6 (lower is better)
Translates to: KKSKWAKEEVSL*PGPMASAVPRP
Trigger: GGGACGAGGCACAGCAGAGGCCATGGGACCTGGTCAAAGCGAGACTTCTTCCTTGGCCCATTTTGATTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS GCA 72 bp CCTTCTTCTATTTGCACCTCCCTCGTAATTGCGGCTTaGATGTGGCTTCTCACAGCCTCTCCGGTTGTTCCG +
Preference number: 6 (lower is better)
Translates to: PSSICTSLVIAA*MWLLTASPVVP
Trigger: CGGAACAACCGGAGAGGCTGTGAGAAGCCACATGCAAGCCGCAATTACGAGGGAGGTGCAAATAGAAGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CCA 72 bp GCAGAAGTCAGCCAGGAAAAGGCACAGGGAACATTCTaGGAACTGCAAGGAGGACAGGGTGTGCAGAATGGA +
Preference number: 6 (lower is better)
Translates to: AEVSQEKAQGTF*ELQGGQGVQNG
Trigger: TCCATTCTGCACACCCTGTCCTCCTTGCAGTTCCCAGAATGTTCCCTGTGCCTTTTCCTGGCTGACTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488215.5
CDS CCA 72 bp TCTATTTGCACCTCCCTCGTAATTGCGGCTTGCATGTaGCTTCTCACAGCCTCTCCGGTTGTTCCGCAGCTT +
Preference number: 6 (lower is better)
Translates to: SICTSLVIAACM*LLTASPVVPQL
Trigger: AAGCTGCGGAACAACCGGAGAGGCTGTGAGAAGCCACATGCAAGCCGCAATTACGAGGGAGGTGCAAATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CAA 72 bp ATGCTATGCTTCCCACTGAGCCCATCATCCTCTTCCTaGACGGGTTTGAACATAAACGGTGGCGGGTCCACG +
Preference number: 6 (lower is better)
Translates to: MLCFPLSPSSSS*TGLNINGGGST
Trigger: CGTGGACCCGCCACCGTTTATGTTCAAACCCGTCAAGGAAGAGGATGATGGGCTCAGTGGGAAGCATAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000464367.1
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS CAA 72 bp CTCGTCCCAGCATCTGCGGTGACACAGGAGAGAGTGTaGACAAGGATGTGCTGTCCGGGAATCTCCCTTTAT +
Preference number: 6 (lower is better)
Translates to: LVPASAVTQERV*TRMCCPGISLY
Trigger: ATAAAGGGAGATTCCCGGACAGCACATCCTTGTCAACACTCTCTCCTGTGTCACCGCAGATGCTGGGACGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CAA 72 bp GCCTTCTTCTATTTGCACCTCCCTCGTAATTGCGGCTaGCATGTGGCTTCTCACAGCCTCTCCGGTTGTTCC +
Preference number: 6 (lower is better)
Translates to: AFFYLHLPRNCG*HVASHSLSGCS
Trigger: GGAACAACCGGAGAGGCTGTGAGAAGCCACATGCAAGCCGCAATTACGAGGGAGGTGCAAATAGAAGAAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CAA 90 bp CTTTTCTCTCTCTCTCGGTCCCGGTCTCGGTCCCGGTCCTTCTCTTaGTCTTTGTCTTTGTCTTTGTCCGCTGTCATGATTCGCCACGTG +
Preference number: 6 (lower is better)
Translates to: LFSLSRSRSRSRSFS*SLSLSLSAVMIRHV
Trigger: CACGTGGCGAATCATGACAGCGGACAAAGACAAAGACAAAGACAAAGAGAAGGACCGGGACCGAGACCGGGACCGAGAGAGAGAGAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
ENST00000468247.1
ENST00000480342.5
ENST00000656437.1
ENST00000659924.1
CDS TCA 72 bp CAAGGATGTGCTGTCCGGGAATCTCCCTTTATCCAGTaGCAGCTCCATTCATCTCACCGAGCTTTGCCCAGA +
Preference number: 6 (lower is better)
Translates to: QGCAVRESPFIQ*QLHSSHRALPR
Trigger: TCTGGGCAAAGCTCGGTGAGATGAATGGAGCTGTCACTGGATAAAGGGAGATTCCCGGACAGCACATCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS GCA 72 bp TCTGCGGTGACACAGGAGAGAGTGTTGACAAGGATGTaGTGTCCGGGAATCTCCCTTTATCCAGTGACAGCT +
Preference number: 6 (lower is better)
Translates to: SAVTQERVLTRM*CPGISLYPVTA
Trigger: AGCTGTCACTGGATAAAGGGAGATTCCCGGACAGCACATCCTTGTCAACACTCTCTCCTGTGTCACCGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS GCA 72 bp TTCACAGCCTTCTTCTATTTGCACCTCCCTCGTAATTaGGGCTTGCATGTGGCTTCTCACAGCCTCTCCGGT +
Preference number: 6 (lower is better)
Translates to: FTAFFYLHLPRN*GLHVASHSLSG
Trigger: ACCGGAGAGGCTGTGAGAAGCCACATGCAAGCCGCAATTACGAGGGAGGTGCAAATAGAAGAAGGCTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CCA 72 bp CCTGCTCACTGTCCTCACTGTCGAAGTCATCTTCACTaGCTGAACTTAGGTCCAAGAATTCACTGGACGGGG +
Preference number: 6 (lower is better)
Translates to: PAHCPHCRSHLH*LNLGPRIHWTG
Trigger: CCCCGTCCAGTGAATTCTTGGACCTAAGTTCAGCCAGTGAAGATGACTTCGACAGTGAGGACAGTGAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS CCA 72 bp TTCTCAATGGGCGGGAGCTCACCGTATTTCTTGAAGTaGATGCGACAGTCGGTGCAAAGCAGGATGTTCTCC +
Preference number: 6 (lower is better)
Translates to: FSMGGSSPYFLK*MRQSVQSRMFS
Trigger: GGAGAACATCCTGCTTTGCACCGACTGTCGCATCCACTTCAAGAAATACGGTGAGCTCCCGCCCATTGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400908.7
ENST00000464367.1
ENST00000476556.5
ENST00000488215.5
ENST00000656437.1
CDS CAA 72 bp TACAGCTCCGGCGTGGCCTTGAATTCTCACTCTCTCTaGCTTTGTCTCTTTTCTCTCTCTCTCGGTCCCGGT +
Preference number: 6 (lower is better)
Translates to: YSSGVALNSHSL*LCLFSLSLGPG
Trigger: ACCGGGACCGAGAGAGAGAGAAAAGAGACAAAGCAAGAGAGAGTGAGAATTCAAGGCCACGCCGGAGCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
ENST00000480342.5
ENST00000656437.1
ENST00000659924.1
CDS CAA 72 bp AAAGAAATCAAAATGGGCCAAGGAAGAAGTCTCGCTTaGACCAGGTCCCATGGCCTCTGCTGTGCCTCGTCC +
Preference number: 6 (lower is better)
Translates to: KEIKMGQGRSLA*TRSHGLCCASS
Trigger: GGACGAGGCACAGCAGAGGCCATGGGACCTGGTCAAAGCGAGACTTCTTCCTTGGCCCATTTTGATTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CAA 90 bp GGAGGCACATGCAGTCTCAGAGACCTCATAGAGCTTTCACTGAGCTaGTGCTATGACCTAAGCCTTCACGCAGAACGCAGAAACTTCCCC +
Preference number: 6 (lower is better)
Translates to: GGTCSLRDLIELSLS*CYDLSLHAERRNFP
Trigger: GGGGAAGTTTCTGCGTTCTGCGTGAAGGCTTAGGTCATAGCACAAGCTCAGTGAAAGCTCTATGAGGTCTCTGAGACTGCATGTGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464972.5
ENST00000507012.1
CDS CAA 90 bp TGCCTGCACCACGTGGCTTTTCTTGACTTCACAGCCTTCTTCTATTaGCACCTCCCTCGTAATTGCGGCTTGCATGTGGCTTCTCACAGC +
Preference number: 6 (lower is better)
Translates to: CLHHVAFLDFTAFFY*HLPRNCGLHVASHS
Trigger: GCTGTGAGAAGCCACATGCAAGCCGCAATTACGAGGGAGGTGCAAATAGAAGAAGGCTGTGAAGTCAAGAAAAGCCACGTGGTGCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS TCA 72 bp AAGGCTGAAGCTGGAGCTTTCCATGAAAAGACTGGATaGGGACTGTGCCAGTGGCAGTGTGGCCTAAGTGTA +
Preference number: 6 (lower is better)
Translates to: KAEAGAFHEKTG*GLCQWQCGLSV
Trigger: TACACTTAGGCCACACTGCCACTGGCACAGTCCTCATCCAGTCTTTTCATGGAAAGCTCCAGCTTCAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488215.5
CDS TCA 72 bp CAGAGACCTCATAGAGCTTTCACTGAGCTTGTGCTATaGCCTAAGCCTTCACGCAGAACGCAGAAACTTCCC +
Preference number: 6 (lower is better)
Translates to: QRPHRAFTELVL*PKPSRRTQKLP
Trigger: GGGAAGTTTCTGCGTTCTGCGTGAAGGCTTAGGTCATAGCACAAGCTCAGTGAAAGCTCTATGAGGTCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464972.5
ENST00000507012.1
CDS TCA 72 bp AGACCAGTTAAAGAGGCTGCTGACACAGTTCAGGTATaGGATGAGGACCTCAACTACTGGCACACTCCACCT +
Preference number: 6 (lower is better)
Translates to: RPVKEAADTVQV*DEDLNYWHTPP
Trigger: AGGTGGAGTGTGCCAGTAGTTGAGGTCCTCATCTCATACCTGAACTGTGTCAGCAGCCTCTTTAACTGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488215.5
CDS CAA 72 bp CACGTGGCTTTTCTTGACTTCACAGCCTTCTTCTATTaGCACCTCCCTCGTAATTGCGGCTTGCATGTGGCT +
Preference number: 6 (lower is better)
Translates to: HVAFLDFTAFFY*HLPRNCGLHVA
Trigger: AGCCACATGCAAGCCGCAATTACGAGGGAGGTGCAAATAGAAGAAGGCTGTGAAGTCAAGAAAAGCCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS TCA 72 bp CTGCTTCGGGGGTCTTCTTCCAATAGTAATAGAAGGTaGTCAGCTCCCCTGTTTCCTTATTGGGAAGCAGCT +
Preference number: 6 (lower is better)
Translates to: LLRGSSSNSNRR*SAPLFPYWEAA
Trigger: AGCTGCTTCCCAATAAGGAAACAGGGGAGCTGATCACCTTCTATTACTATTGGAAGAAGACCCCCGAAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000460659.5
ENST00000465125.1
ENST00000476556.5
ENST00000488215.5
ENST00000492766.5
ENST00000656437.1
CDS GCA 72 bp AGTCTCAGAGACCTCATAGAGCTTTCACTGAGCTTGTaGTATGACCTAAGCCTTCACGCAGAACGCAGAAAC +
Preference number: 6 (lower is better)
Translates to: SLRDLIELSLSL*YDLSLHAERRN
Trigger: GTTTCTGCGTTCTGCGTGAAGGCTTAGGTCATAGCACAAGCTCAGTGAAAGCTCTATGAGGTCTCTGAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464972.5
ENST00000507012.1
CDS GCA 72 bp ACGTGGCTTTTCTTGACTTCACAGCCTTCTTCTATTTaGACCTCCCTCGTAATTGCGGCTTGCATGTGGCTT +
Preference number: 6 (lower is better)
Translates to: TWLFLTSQPSSI*TSLVIAACMWL
Trigger: AAGCCACATGCAAGCCGCAATTACGAGGGAGGTGCAAATAGAAGAAGGCTGTGAAGTCAAGAAAAGCCACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CCA 72 bp TCGTTAACTCCAGGCATCCAGACCAGTTCCTCATGTTaGGTCACTGTATCACCATCTGGAGAAGGAAATGGT +
Preference number: 6 (lower is better)
Translates to: SLTPGIQTSSSC*VTVSPSGEGNG
Trigger: ACCATTTCCTTCTCCAGATGGTGATACAGTGACCCAACATGAGGAACTGGTCTGGATGCCTGGAGTTAACGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000464972.5
ENST00000480342.5
ENST00000507012.1
ENST00000656437.1
ENST00000659924.1
CDS CAA 72 bp CTTCTTTCTTCAGTCGACTGTAATAATCTTCCTGACTaGGTAGGTGGCCACCATGCATGTGGGGGTGTCCAT +
Preference number: 6 (lower is better)
Translates to: LLSSVDCNNLPD*VGGHHACGGVH
Trigger: ATGGACACCCCCACATGCATGGTGGCCACCTACCAAGTCAGGAAGATTATTACAGTCGACTGAAGAAAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337907.7
ENST00000377464.5
ENST00000400907.6
ENST00000400908.7
ENST00000476556.5
CDS CAA 72 bp TCATTAAAACTGTCTGCTGGATGGGAATCCATGGGTTaGCAAGGCTGTATCTGTGGGCACATTTCTCTCCCC +
Preference number: 6 (lower is better)
Translates to: SLKLSAGWESMG*QGCICGHISLP
Trigger: GGGGAGAGAAATGTGCCCACAGATACAGCCTTGCAAACCCATGGATTCCCATCCAGCAGACAGTTTTAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS GCA 72 bp ATAAAAACAAGTCACCAAGCCAAGCATGGTAGAGCATaGCTACAGTCCCAGCTACTTAAGAAGCTGGGGCAA +
Preference number: 6 (lower is better)
Translates to: IKTSHQAKHGRA*LQSQLLKKLGQ
Trigger: TTGCCCCAGCTTCTTAAGTAGCTGGGACTGTAGGCATGCTCTACCATGCTTGGCTTGGTGACTTGTTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS CCA 72 bp GATGGAGATGTAGCTTCATTAAAACTGTCTGCTGGATaGGAATCCATGGGTTTGCAAGGCTGTATCTGTGGG +
Preference number: 6 (lower is better)
Translates to: DGDVASLKLSAG*ESMGLQGCICG
Trigger: CCCACAGATACAGCCTTGCAAACCCATGGATTCCCATCCAGCAGACAGTTTTAATGAAGCTACATCTCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS CAA 72 bp CAACGTTTCAAAAATGCCTGCACCACGTGGCTTTTCTaGACTTCACAGCCTTCTTCTATTTGCACCTCCCTC +
Preference number: 6 (lower is better)
Translates to: QRFKNACTTWLF*TSQPSSICTSL
Trigger: GAGGGAGGTGCAAATAGAAGAAGGCTGTGAAGTCAAGAAAAGCCACGTGGTGCAGGCATTTTTGAAACGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000656437.1
CDS CAA 90 bp TCGATCCTGAACCAAATGCTGATACACAGAATCTGGAACCTCAGATaGACGGTAGTACCATTTGACGTTCATGAGGAGATGGTCCCTCTT +
Preference number: 6 (lower is better)
Translates to: SILNQMLIHRIWNLR*TVVPFDVHEEMVPL
Trigger: AAGAGGGACCATCTCCTCATGAACGTCAAATGGTACTACCGTCAATCTGAGGTTCCAGATTCTGTGTATCAGCATTTGGTTCAGGATCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
ENST00000469251.1
ENST00000480342.5
ENST00000514428.1
ENST00000656437.1
ENST00000659924.1
CDS GCA 72 bp CCCTTTTCTACACTAACAACTCAAAATGGAGGCACATaGAGTCTCAGAGACCTCATAGAGCTTTCACTGAGC +
Preference number: 6 (lower is better)
Translates to: PFSTLTTQNGGT*SLRDLIELSLS
Trigger: GCTCAGTGAAAGCTCTATGAGGTCTCTGAGACTGCATGTGCCTCCATTTTGAGTTGTTAGTGTAGAAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377464.5
ENST00000464972.5
ENST00000507012.1
CDS GCA 72 bp GTCACAAGATGGAGATGTAGCTTCATTAAAACTGTCTaGTGGATGGGAATCCATGGGTTTGCAAGGCTGTAT +
Preference number: 6 (lower is better)
Translates to: VTRWRCSFIKTV*WMGIHGFARLY
Trigger: ATACAGCCTTGCAAACCCATGGATTCCCATCCAGCAGACAGTTTTAATGAAGCTACATCTCCATCTTGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS CCA 72 bp ACAAGATGGAGATGTAGCTTCATTAAAACTGTCTGCTaGATGGGAATCCATGGGTTTGCAAGGCTGTATCTG +
Preference number: 6 (lower is better)
Translates to: TRWRCSFIKTVC*MGIHGFARLYL
Trigger: CAGATACAGCCTTGCAAACCCATGGATTCCCATCCAGCAGACAGTTTTAATGAAGCTACATCTCCATCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS CCA 72 bp ATGTCGATCCTGAACCAAATGCTGATACACAGAATCTaGAACCTCAGATTGACGGTAGTACCATTTGACGTT +
Preference number: 6 (lower is better)
Translates to: MSILNQMLIHRI*NLRLTVVPFDV
Trigger: AACGTCAAATGGTACTACCGTCAATCTGAGGTTCCAGATTCTGTGTATCAGCATTTGGTTCAGGATCGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
ENST00000469251.1
ENST00000480342.5
ENST00000514428.1
ENST00000656437.1
ENST00000659924.1
CDS CAA 72 bp AACCAAATGCTGATACACAGAATCTGGAACCTCAGATaGACGGTAGTACCATTTGACGTTCATGAGGAGATG +
Preference number: 6 (lower is better)
Translates to: NQMLIHRIWNLR*TVVPFDVHEEM
Trigger: CATCTCCTCATGAACGTCAAATGGTACTACCGTCAATCTGAGGTTCCAGATTCTGTGTATCAGCATTTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
ENST00000469251.1
ENST00000480342.5
ENST00000514428.1
ENST00000656437.1
ENST00000659924.1
CDS GCA 72 bp CAAAAGCACAAGAAATCCGTAAGTCGTTTACAGCAATaGCTTTTACAAGTCACAAGATGGAGATGTAGCTTC +
Preference number: 6 (lower is better)
Translates to: QKHKKSVSRLQQ*LLQVTRWRCSF
Trigger: GAAGCTACATCTCCATCTTGTGACTTGTAAAAGGCATTGCTGTAAACGACTTACGGATTTCTTGTGCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480342.5
CDS CCA 72 bp GTAATCAGAAATGAAGAGCTCTCGGTTCTTGATAACTaGGTCTGTAATGACAAGTTCTCTTCCAGAGTCATT +
Preference number: 6 (lower is better)
Translates to: VIRNEELSVLDN*VCNDKFSSRVI
Trigger: AATGACTCTGGAAGAGAACTTGTCATTACAGACCCAGTTATCAAGAACCGAGAGCTCTTCATTTCTGATTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000337907.7
ENST00000400907.6
ENST00000400908.7
ENST00000469251.1
ENST00000480342.5
ENST00000514428.1
ENST00000656437.1
ENST00000659924.1