RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RER1 (Homo sapiens)

Ensembl gene IDs: ENSG00000157916

Ensembl transcript IDs: ENST00000306256.13, ENST00000378512.5, ENST00000378513.7, ENST00000378518.5, ENST00000443438.5, ENST00000462129.1, ENST00000488353.2, ENST00000493207.1, ENST00000605895.6

Found 470 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCCTGCCTGCCCACCTGGCACAGCGGGGACCGGCCACTCGCCCTTaGTCCCATGGGCTCCACCCGCCTGGCTTCCCGCCTGCAGCTGAC +
Preference number: 1 (lower is better)
Translates to: LLPAHLAQRGPATRP*SHGLHPPGFPPAAD
Trigger: GTCAGCTGCAGGCGGGAAGCCAGGCGGGTGGAGCCCATGGGAGCAAGGGCGAGTGGCCGGTCCCCGCTGTGCCAGGTGGGCAGGCAGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
3UTR GCA 90 bp AGATCATCCCTCGGGCTCTGTGGAGTGGCTGGCACCACCTGCGGCTaGTGGGGAAGGCGGCTGGCGGGGAGCGGCCCGTTCCTCCCTCGC +
Preference number: 1 (lower is better)
Translates to: RSSLGLCGVAGTTCG*WGRRLAGSGPFLPR
Trigger: GCGAGGGAGGAACGGGCCGCTCCCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGCCCGAGGGATGATCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
3UTR GCA 90 bp CAGGCTAGATCATCCCTCGGGCTCTGTGGAGTGGCTGGCACCACCTaGGGCTGCTGGGGAAGGCGGCTGGCGGGGAGCGGCCCGTTCCTC +
Preference number: 1 (lower is better)
Translates to: QARSSLGLCGVAGTT*GCWGRRLAGSGPFL
Trigger: GAGGAACGGGCCGCTCCCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGCCCGAGGGATGATCTAGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
3UTR CCA 90 bp GGACACGCAGGAATCAGGCTAGATCATCCCTCGGGCTCTGTGGAGTaGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGGA +
Preference number: 1 (lower is better)
Translates to: GHAGIRLDHPSGSVE*LAPPAAAGEGGWRG
Trigger: TCCCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGCCCGAGGGATGATCTAGCCTGATTCCTGCGTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
3UTR GCA 90 bp GCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCTTCACTGTaGTCTGGCCAAGCGCGTGCGACTTCCTGTCACACCTTAGGCCTG +
Preference number: 1 (lower is better)
Translates to: AAVAPSISTQSFASL*SGQARATSCHTLGL
Trigger: CAGGCCTAAGGTGTGACAGGAAGTCGCACGCGCTTGGCCAGAGCACAGTGAAGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR GCA 90 bp GTGGGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTaGTTCACTGTGCTCTGGCCAAGCGCGTGCGACTTCCTGTCACAC +
Preference number: 1 (lower is better)
Translates to: VGRCRRGSIHQHPVL*FTVLWPSACDFLSH
Trigger: GTGTGACAGGAAGTCGCACGCGCTTGGCCAGAGCACAGTGAAGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR CCA 90 bp CGTGGCTCCATCCATCAGCACCCAGTCCTTTGCTTCACTGTGCTCTaGCCAAGCGCGTGCGACTTCCTGTCACACCTTAGGCCTGAGCGC +
Preference number: 1 (lower is better)
Translates to: RGSIHQHPVLCFTVL*PSACDFLSHLRPER
Trigger: GCGCTCAGGCCTAAGGTGTGACAGGAAGTCGCACGCGCTTGGCCAGAGCACAGTGAAGCAAAGGACTGGGTGCTGATGGATGGAGCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR TCA 90 bp CAGAAATCTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCCTaGCCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATGGGGGCT +
Preference number: 1 (lower is better)
Translates to: QKSASQPETHREVSS*PRRTHEPGPGGMGA
Trigger: AGCCCCCATACCCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAGATTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR CCA 90 bp GGGGCCCAGGAGGAGAGGCCTTCACTCGCATGTCAGTGTCTCATCTaGGACCACAGCTGTGATGTTCTGCTGTGCAATATGGGTCACCTT +
Preference number: 1 (lower is better)
Translates to: GAQEERPSLACQCLI*DHSCDVLLCNMGHL
Trigger: AAGGTGACCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACACTGACATGCGAGTGAAGGCCTCTCCTCCTGGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR GCA 90 bp GCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCTTaGTGTTTGACTTACTTAGGAATGAGGATGACCCTGTATTCCTGG +
Preference number: 1 (lower is better)
Translates to: ASRTGFRQRPAQTMS*CLTYLGMRMTLYSW
Trigger: CCAGGAATACAGGGTCATCCTCATTCCTAAGTAAGTCAAACAGCAAGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR GCA 90 bp CATCAGCACCCAGTCCTTTGCTTCACTGTGCTCTGGCCAAGCGCGTaGGACTTCCTGTCACACCTTAGGCCTGAGCGCTTATTAAGAAAA +
Preference number: 1 (lower is better)
Translates to: HQHPVLCFTVLWPSA*DFLSHLRPERLLRK
Trigger: TTTTCTTAATAAGCGCTCAGGCCTAAGGTGTGACAGGAAGTCGCACGCGCTTGGCCAGAGCACAGTGAAGCAAAGGACTGGGTGCTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR TCA 90 bp AAAAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTaGGGCAGCCTCAGTCCCGCTTCTAGCTGGCGAAGGCCTTGCCGG +
Preference number: 1 (lower is better)
Translates to: KKALLTMAQNCSCNT*GSLSPASSWRRPCR
Trigger: CCGGCAAGGCCTTCGCCAGCTAGAAGCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378512.5
ENST00000378513.7
3UTR CCA 90 bp AGTGTCTCATCTGGGACCACAGCTGTGATGTTCTGCTGTGCAATATaGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGT +
Preference number: 1 (lower is better)
Translates to: SVSSGTTAVMFCCAI*VTFRKGQTKGGLSC
Trigger: ACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCGAAAGGTGACCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR TCA 90 bp GCTTCCCGCCTGCAGCTGACTAGAATTCCATCCGTGAGAAACACTTaGACGTCACTGAAAAAGAAATCCATGCGATTTGGTTTAAGCGCC +
Preference number: 1 (lower is better)
Translates to: ASRLQLTRIPSVRNT*TSLKKKSMRFGLSA
Trigger: GGCGCTTAAACCAAATCGCATGGATTTCTTTTTCAGTGACGTTCAAGTGTTTCTCACGGATGGAATTCTAGTCAGCTGCAGGCGGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
3UTR CCA 90 bp CGTGAGAAACACTTGAACGTCACTGAAAAAGAAATCCATGCGATTTaGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTACA +
Preference number: 1 (lower is better)
Translates to: REKHLNVTEKEIHAI*FKRQFLLEPDISVT
Trigger: TGTAACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATGGATTTCTTTTTCAGTGACGTTCAAGTGTTTCTCACG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR GCA 90 bp CCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCGGCCGGGTGGGCAGATaGCGCCGTGGCTCCATCCAT +
Preference number: 2 (lower is better)
Translates to: PEGGWAEHIPQDLMTTRGGRVGR*RRGSIH
Trigger: ATGGATGGAGCCACGGCGGCATCTGCCCACCCGGCC...GCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR GCA 90 bp CTGCCCACCTGGCACAGCGGGGACCGGCCACTCGCCCTTGCTCCCATGGGCTCCTGCCGGCATCCTCCTTaGCTCTGTACCTTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: LPTWHSGDRPLALAPMGSCRHPP*LCTFSS
Trigger: GGAAGAGAAGGTACAGAGGCAAGGAGGATGCCGGCA...GGAGCCCATGGGAGCAAGGGCGAGTGGCCGGTCCCCGCTGTGCCAGGTGGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378512.5
ENST00000378513.7
3UTR-3UTR GCA 90 bp GCTCTGTGGAGTGGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGTGCCGGCATCCTCCTTaGCTCTGTACCTTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: ALWSGWHHLRLLGKAAGGCRHPP*LCTFSS
Trigger: GGAAGAGAAGGTACAGAGGCAAGGAGGATGCCGGCA...CCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378512.5
ENST00000378513.7
3UTR-3UTR CCA 90 bp GACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCGGCCCCAGCCTGCTTCACTGTGCTCTaGCCAAGCGCGTGCGACTTC +
Preference number: 2 (lower is better)
Translates to: DLLTHGHCCVQPLSSAPACFTVL*PSACDF
Trigger: GAAGTCGCACGCGCTTGGCCAGAGCACAGTGAAGCA...GGCTGGGGCCGAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp CTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCTGTTCTTGCAACACGTaGGGCAGCCTCAGTCCCGCT +
Preference number: 2 (lower is better)
Translates to: LGRRPADPRSLLCSAPQLCSCNT*GSLSPA
Trigger: AGCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACA...GAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp CCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCTCACCGTGTCAATTCTaGGACAGGAAACACCGCCCA +
Preference number: 2 (lower is better)
Translates to: PEGGWAEHIPQDLMTTRGSPCQF*DRKHRP
Trigger: TGGGCGGTGTTTCCTGTCTCAGAATTGACACGGTGA...GCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR GCA 90 bp AGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATGGGCCCTGCCAGCTTCGCTaGCCCTCATGGAGGGTTGCA +
Preference number: 2 (lower is better)
Translates to: RGLFLTQTHSRARSWGYGPCQLR*PSWRVA
Trigger: TGCAACCCTCCATGAGGGGCAGCGAAGCTGGCAGGG...CCCATACCCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR GCA 90 bp CATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGAAGAGGCACTGGGGGCTaGGGCCGGGTGGGCAGATGC +
Preference number: 2 (lower is better)
Translates to: HFPADVKHLASRTGFRQRRGTGG*GRVGRC
Trigger: GCATCTGCCCACCCGGCCGCAGCCCCCAGTGCCTCT...TCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp CAGAAGTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCTCCTGCCTGCCCACCTaGCACAGCGGGGACCGGCCA +
Preference number: 2 (lower is better)
Translates to: QKYHLGAALAILGQGHTSSCLPT*HSGDRP
Trigger: TGGCCGGTCCCCGCTGTGCCAGGTGGGCAGGCAGGA...GCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTACTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR CAA 90 bp GGTGGGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTaGCTTCACTGTGCTCTGGCCAAGCGCGTGCGACTTCCTGTCACA +
Preference number: 2 (lower is better)
Translates to: GGQMPPWLHPSAPSP*LHCALAKRVRLPVT
Trigger: TGTGACAGGAAGTCGCACGCGCTTGGCCAGAGCACAGTGAAGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp CTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCGCCACATTTCCCTGCTaGCGTAAAACACCTGGCCAG +
Preference number: 2 (lower is better)
Translates to: LGRRPADPRSLLCSAPQLATFPC*RKTPGQ
Trigger: CTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGC...GAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp CCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAGCAGCACTGGCTATTCCTGCCTGCCCACCTaGCACAGCGGGGACCGGCCA +
Preference number: 2 (lower is better)
Translates to: PKCLNTVPEVPPGSSTGYSCLPT*HSGDRP
Trigger: TGGCCGGTCCCCGCTGTGCCAGGTGGGCAGGCAGGA...ATAGCCAGTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp CTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCGCTCTGTGGAGTGGCTaGCACCACCTGCGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: LHLSLRRTERSLPDPDALALWSG*HHLRLL
Trigger: CAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGC...GAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR GCA 90 bp CCTCCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGCTTCCCGGCCACTCGCCCTTaGTCCCATGGGCTCCACCCG +
Preference number: 2 (lower is better)
Translates to: PPSEAFGTHTFNTRQGRFPATRP*SHGLHP
Trigger: CGGGTGGAGCCCATGGGAGCAAGGGCGAGTGGCCGG...GAAGCGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp AGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATGGGTGCTTCACTGTGCTCTaGCCAAGCGCGTGCGACTTC +
Preference number: 2 (lower is better)
Translates to: RGLFLTQTHSRARSWGYGCFTVL*PSACDF
Trigger: GAAGTCGCACGCGCTTGGCCAGAGCACAGTGAAGCA...CCCATACCCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp CTCTGTGGAGTGGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGGTCCGTGAGAAACACTTaGACGTCACTGAAAAAGAAA +
Preference number: 2 (lower is better)
Translates to: LCGVAGTTCGCWGRRLAGSVRNT*TSLKKK
Trigger: TTTCTTTTTCAGTGACGTTCAAGTGTTTCTCACGGA...CCCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR GCA 90 bp GCTCTGTGGAGTGGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGATCATGTGCTTGATTTaGCTCTTCATCGTGATACAG +
Preference number: 2 (lower is better)
Translates to: ALWSGWHHLRLLGKAAGGIMCLI*LFIVIQ
Trigger: CTGTATCACGATGAAGAGGCAAATCAAGCACATGAT...CCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378512.5
ENST00000378513.7
3UTR-3UTR GCA 90 bp GGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGTTGCCTCGAGGGCGTGTaGCACATTTCCCTGCTGACG +
Preference number: 2 (lower is better)
Translates to: GLDDHTGQRETNQGQHLRCLEGV*HISLLT
Trigger: CGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCA...ACGGAGGTGCTGGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp CCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGGTTTTTCGGGCTCTGTGGAGTaGCTGGCACCACCTGCGGCT +
Preference number: 2 (lower is better)
Translates to: PSARPQPISRLHLMFPGFSGSVE*LAPPAA
Trigger: AGCCGCAGGTGGTGCCAGCCACTCCACAGAGCCCGA...AAAACCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp AAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCGGGCAGATGCCGCCGTaGCTCCATCCATCAGCACCC +
Preference number: 2 (lower is better)
Translates to: KMPRGRVPHFPADVKHLAGQMPP*LHPSAP
Trigger: GGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCC...GGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp GGTGGGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCTTCACAGGGACACACAAGCTTaGACGTGGCCTCTTAGAGGA +
Preference number: 2 (lower is better)
Translates to: GGQMPPWLHPSAPSPLLHRDTQA*TWPLRG
Trigger: TCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCT...GTGAAGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR GCA 90 bp GAAGTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCTTAGCCAGTCTGCTCCCTaGCAGCTTCGCTGCCCCTCA +
Preference number: 2 (lower is better)
Translates to: EVPPGSSTGYLGSGTHKLSQSAP*QLRCPS
Trigger: TGAGGGGCAGCGAAGCTGGCAGGGAGCAGACTGGCT...AAGCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR GCA 90 bp GGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGTTCCTTTGCTTCACTGTaGTCTGGCCAAGCGCGTGCG +
Preference number: 2 (lower is better)
Translates to: GLDDHTGQRETNQGQHLRSFASL*SGQARA
Trigger: CGCACGCGCTTGGCCAGAGCACAGTGAAGCAAAGGA...ACGGAGGTGCTGGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp AGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATGGGACCAGAAGTACCACCTaGGAGCAGCACTGGCTATCT +
Preference number: 2 (lower is better)
Translates to: RGLFLTQTHSRARSWGYGTRSTT*EQHWLS
Trigger: AGATAGCCAGTGCTGCTCCCAGGTGGTACTTCTGGT...CCCATACCCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp GGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAAGGGACACACAAGCTTaGACGTGGCCTCTTAGAGGA +
Preference number: 2 (lower is better)
Translates to: GWAEHIPQDLMTTRGREKRDTQA*TWPLRG
Trigger: TCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCT...TTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp CAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGCCACATTTCCCTGCTaGCGTAAAACACCTGGCCAG +
Preference number: 2 (lower is better)
Translates to: QDLMTTRGREKPTKASTSATFPC*RKTPGQ
Trigger: CTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGC...GGAGGTGCTGGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR GCA 90 bp CATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGATCCTTTGCTTCACTGTaGTCTGGCCAAGCGCGTGCG +
Preference number: 2 (lower is better)
Translates to: HFPADVKHLASRTGFRQRSFASL*SGQARA
Trigger: CGCACGCGCTTGGCCAGAGCACAGTGAAGCAAAGGA...TCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp AGCACCTCCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGATCCCTCGGGCTCTGTaGAGTGGCTGGCACCACCTG +
Preference number: 2 (lower is better)
Translates to: STSVGSIWHTHLQYTSRSIPRAL*SGWHHL
Trigger: CAGGTGGTGCCAGCCACTCCACAGAGCCCGAGGGAT...CGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp TTTCTCGAATCAAAAACGCTGACATGCAAGTGGGTTCCGCCTCTCCCGCAGTGGAGTCCCGCTTCTAGCTaGCGAAGGCCTTGCCGGCAT +
Preference number: 2 (lower is better)
Translates to: FLESKTLTCKWVPPLPQWSPASS*RRPCRH
Trigger: ATGCCGGCAAGGCCTTCGCCAGCTAGAAGCGGGACT...CCACTGCGGGAGAGGCGGAACCCACTTGCATGTCAGCGTTTTTGATTCGAGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000378513.7
3UTR-3UTR CCA 90 bp GGCTTCCGGCAAAGACCCGCGCAAACCATGTCTTGCTGTTTGACTTACTTAGGAATCCCTCGGGCTCTGTaGAGTGGCTGGCACCACCTG +
Preference number: 2 (lower is better)
Translates to: GFRQRPAQTMSCCLTYLGIPRAL*SGWHHL
Trigger: CAGGTGGTGCCAGCCACTCCACAGAGCCCGAGGGAT...TCCTAAGTAAGTCAAACAGCAAGACATGGTTTGCGCGGGTCTTTGCCGGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp CTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCTTAAGAACCAAGTTTTaGGTCATTAGGATAGAGGCC +
Preference number: 2 (lower is better)
Translates to: LGRRPADPRSLLCSAPQLLRTKF*VIRIEA
Trigger: GGCCTCTATCCTAATGACTCAAAACTTGGTTCTTAA...GAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp GCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCCTGGGACCACAGCTGTaGTGTTCTGCTGTGCAATAT +
Preference number: 2 (lower is better)
Translates to: AEHIPQDLMTTRGREKPTLGPQL*CSAVQY
Trigger: ATATTGCACAGCAGAACATCACAGCTGTGGTCCCAG...GGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR GCA 90 bp TGTCAGTGTCTCATCTGGGACCACAGCTGTGATGTTCTGCTGTGCAATATGGGTAGCCAGTCTGCTCCCTaGCAGCTTCGCTGCCCCTCA +
Preference number: 2 (lower is better)
Translates to: CQCLIWDHSCDVLLCNMGSQSAP*QLRCPS
Trigger: TGAGGGGCAGCGAAGCTGGCAGGGAGCAGACTGGCT...ACCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACACTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR CAA 90 bp GGCCAGCAGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCTaGCTGTTTGACTTACTTAGGAATGAGGATGACCCTGTATTCCTG +
Preference number: 2 (lower is better)
Translates to: GQQDRLPAKTRANHV*LFDLLRNEDDPVFL
Trigger: CAGGAATACAGGGTCATCCTCATTCCTAAGTAAGTCAAACAGCAAGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCTGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp CTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCCACTTGGTAAAACGTTaGGAGTATTTCTTTTCTCGA +
Preference number: 2 (lower is better)
Translates to: LGRRPADPRSLLCSAPQLHLVKR*EYFFSR
Trigger: TCGAGAAAAGAAATACTCTCAACGTTTTACCAAGTG...GAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR GCA 90 bp AGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATGGGGCGCAAACCATGTCTTaGTGTTTGACTTACTTAGGA +
Preference number: 2 (lower is better)
Translates to: RGLFLTQTHSRARSWGYGAQTMS*CLTYLG
Trigger: TCCTAAGTAAGTCAAACAGCAAGACATGGTTTGCGC...CCCATACCCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp CCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGTTCTGCTGTGCAATATaGGTCACCTTTCGAAAAGGC +
Preference number: 2 (lower is better)
Translates to: PRGRVPHFPADVKHLASRFCCAI*VTFRKG
Trigger: GCCTTTTCGAAAGGTGACCCATATTGCACAGCAGAA...CCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp GGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAATGACCCTGTATTCCTaGGTTAGTCAAGGTCAGCTT +
Preference number: 2 (lower is better)
Translates to: GWAEHIPQDLMTTRGREKMTLYS*VSQGQL
Trigger: AAGCTGACCTTGACTAACCCAGGAATACAGGGTCAT...TTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp GCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCCTAGAATTCCATCCGTaGGAAACACTTGAACGTCAC +
Preference number: 2 (lower is better)
Translates to: AEHIPQDLMTTRGREKPTLEFHP*ETLERH
Trigger: GTGACGTTCAAGTGTTTCTCACGGATGGAATTCTAG...GGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp CCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGGTTTTCTGGGACCACAGCTGTaGTGTTCTGCTGTGCAATAT +
Preference number: 2 (lower is better)
Translates to: PSARPQPISRLHLMFPGFLGPQL*CSAVQY
Trigger: ATATTGCACAGCAGAACATCACAGCTGTGGTCCCAG...AAAACCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR GCA 90 bp AGTATGAAAAATGACAAACACTCCTGTCCACAGTCTGAGAATCCCAAGTGTCTCCTCCCTCGCAGGCCTTaGTCCTGCCTGCCCACCTGG +
Preference number: 2 (lower is better)
Translates to: SMKNDKHSCPQSENPKCLLPRRP*SCLPTW
Trigger: CCAGGTGGGCAGGCAGGAGCAAGGCCTGCGAGGGAG...GAGACACTTGGGATTCTCAGACTGTGGACAGGAGTGTTTGTCATTTTTCATACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR GCA 90 bp CTTGGGTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCTCAAAAACGCTGACATaGAAGTGGGTTCCGCCTCTC +
Preference number: 2 (lower is better)
Translates to: LGSGTHKLERGLLEELDVSKTLT*KWVPPL
Trigger: GAGAGGCGGAACCCACTTGCATGTCAGCGTTTTTGA...GACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR GCA 90 bp GCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAACTGCATTTAACCTaGGCCAGAGAGTTCACCGTA +
Preference number: 2 (lower is better)
Translates to: AEHIPQDLMTTRGREKPTKLHLT*AREFTV
Trigger: TACGGTGAACTCTCTGGCGCAGGTTAAATGCAGTTT...GGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp CAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCCCCCACACAGTTACTTaGCAATCACCTTTAAAACGT +
Preference number: 2 (lower is better)
Translates to: QDLMTTRGREKPTKASTSPHTVT*QSPLKR
Trigger: ACGTTTTAAAGGTGATTGTCAAGTAACTGTGTGGGG...GGAGGTGCTGGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp GGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGTTTTCCCGCCTCCATTTaGTGTTTCCAGGTTTTCAAA +
Preference number: 2 (lower is better)
Translates to: GLDDHTGQRETNQGQHLRFPASI*CFQVFK
Trigger: TTTGAAAACCTGGAAACATCAAATGGAGGCGGGAAA...ACGGAGGTGCTGGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR GCA 90 bp CCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAGCAGCACTGGCTATACAGCTGTGATGTTCTaGTGTGCAATATGGGTCACC +
Preference number: 2 (lower is better)
Translates to: PKCLNTVPEVPPGSSTGYTAVMF*CAIWVT
Trigger: GGTGACCCATATTGCACAGCAGAACATCACAGCTGT...ATAGCCAGTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp CCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGGAAATCCATGCGATTTaGTTTAAGCGCCAGTTTCTT +
Preference number: 2 (lower is better)
Translates to: PRGRVPHFPADVKHLASREIHAI*FKRQFL
Trigger: AAGAAACTGGCGCTTAAACCAAATCGCATGGATTTC...CCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp CAAACCATGTCTTGCTGTTTGACTTACTTAGGAATGAGGATGACCCTGTATTCCGGGCAGATGCCGCCGTaGCTCCATCCATCAGCACCC +
Preference number: 2 (lower is better)
Translates to: QTMSCCLTYLGMRMTLYSGQMPP*LHPSAP
Trigger: GGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCC...GGAATACAGGGTCATCCTCATTCCTAAGTAAGTCAAACAGCAAGACATGGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR CAA 90 bp AGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCTTGCTGTTaGACTTACTTAGGAATGAGGATGACCCTGTATTCCTGGGTTAGT +
Preference number: 2 (lower is better)
Translates to: RTGFRQRPAQTMSCC*TYLGMRMTLYSWVS
Trigger: ACTAACCCAGGAATACAGGGTCATCCTCATTCCTAAGTAAGTCAAACAGCAAGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp CAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCTCCGTGAGAAACACTTaGACGTCACTGAAAAAGAAA +
Preference number: 2 (lower is better)
Translates to: QDLMTTRGREKPTKASTSSVRNT*TSLKKK
Trigger: TTTCTTTTTCAGTGACGTTCAAGTGTTTCTCACGGA...GGAGGTGCTGGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR GCA 90 bp AGCACCTCCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGCCTGTGTCCAGCGACTaGCATGTTTTAGGTAAAGAC +
Preference number: 2 (lower is better)
Translates to: STSVGSIWHTHLQYTSRSPVSSD*HVLGKD
Trigger: GTCTTTACCTAAAACATGGCAGTCGCTGGACACAGG...CGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp AGAGAGTTCACCGTAGGCATCTTTAATAAACTAACTCCAGCAAAATGTGGGTACGCTCTGTGGAGTGGCTaGCACCACCTGCGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: REFTVGIFNKLTPAKCGYALWSG*HHLRLL
Trigger: CAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGC...GTACCCACATTTTGCTGGAGTTAGTTTATTAAAGATGCCTACGGTGAACTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp AGCACCTCCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGTGTCAGTGTCTCATCTaGGACCACAGCTGTGATGTT +
Preference number: 2 (lower is better)
Translates to: STSVGSIWHTHLQYTSRSCQCLI*DHSCDV
Trigger: AACATCACAGCTGTGGTCCCAGATGAGACACTGACA...CGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp CAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCAAACAGTATGAAAAATaGCAAACACTCCTGTCCACA +
Preference number: 2 (lower is better)
Translates to: QDLMTTRGREKPTKASTSKQYEK*QTLLST
Trigger: TGTGGACAGGAGTGTTTGTCATTTTTCATACTGTTT...GGAGGTGCTGGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp AGTTACTTGACAATCACCTTTAAAACGTTAAGTTCTTTCGGACACGCAGGAATCGCTCTGTGGAGTGGCTaGCACCACCTGCGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: SYLTITFKTLSSFGHAGIALWSG*HHLRLL
Trigger: CAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGC...GATTCCTGCGTGTCCGAAAGAACTTAACGTTTTAAAGGTGATTGTCAAGTAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp CAGAAGTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCTTTAAACATCTCCAGTaGGATGGAATTAGGAAACTG +
Preference number: 2 (lower is better)
Translates to: QKYHLGAALAILGQGHTSFKHLQ*DGIRKL
Trigger: CAGTTTCCTAATTCCATCTCACTGGAGATGTTTAAA...GCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTACTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp CCTCCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGCTTCGAACTTGAGATTTCCTaGAGCGCAGTGTTAAAATGC +
Preference number: 2 (lower is better)
Translates to: PPSEAFGTHTFNTRQGRFELEIS*SAVLKC
Trigger: GCATTTTAACACTGCGCTTCAGGAAATCTCAAGTTC...GAAGCGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR GCA 90 bp GGCTTCCGGCAAAGACCCGCGCAAACCATGTCTTGCTGTTTGACTTACTTAGGACCCCTCATGGAGGGTTaGATGAGGACAGATTTAAAT +
Preference number: 2 (lower is better)
Translates to: GFRQRPAQTMSCCLTYLGPLMEG*MRTDLN
Trigger: ATTTAAATCTGTCCTCATGCAACCCTCCATGAGGGG...TCCTAAGTAAGTCAAACAGCAAGACATGGTTTGCGCGGGTCTTTGCCGGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp GTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCTTGAAGAAATCCATGCGATTTaGTTTAAGCGCCAGTTTCTT +
Preference number: 2 (lower is better)
Translates to: VPPGSSTGYLGSGTHKLEEIHAI*FKRQFL
Trigger: AAGAAACTGGCGCTTAAACCAAATCGCATGGATTTC...TTCAAGCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp CGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCAGATATGTAAACACTaGTACAAGAAAATCCAGACA +
Preference number: 2 (lower is better)
Translates to: RVPHFPADVKHLASRTGFQICKH*YKKIQT
Trigger: TGTCTGGATTTTCTTGTACCAGTGTTTACATATCTG...GAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp CTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCCAGATATGTAAACACTaGTACAAGAAAATCCAGACA +
Preference number: 2 (lower is better)
Translates to: LHLSLRRTERSLPDPDALQICKH*YKKIQT
Trigger: TGTCTGGATTTTCTTGTACCAGTGTTTACATATCTG...GAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp AGTATGAAAAATGACAAACACTCCTGTCCACAGTCTGAGAATCCCAAGTGTCTCACCTGGGAGCAGCACTaGCTATCTTGGGTCAGGGAC +
Preference number: 2 (lower is better)
Translates to: SMKNDKHSCPQSENPKCLTWEQH*LSWVRD
Trigger: GTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGT...GAGACACTTGGGATTCTCAGACTGTGGACAGGAGTGTTTGTCATTTTTCATACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp TGTCAGTGTCTCATCTGGGACCACAGCTGTGATGTTCTGCTGTGCAATATGGGTCTAGAATTCCATCCGTaGGAAACACTTGAACGTCAC +
Preference number: 2 (lower is better)
Translates to: CQCLIWDHSCDVLLCNMGLEFHP*ETLERH
Trigger: GTGACGTTCAAGTGTTTCTCACGGATGGAATTCTAG...ACCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACACTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp CCTCCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGCTTCTTAAGAACCAAGTTTTaGGTCATTAGGATAGAGGCC +
Preference number: 2 (lower is better)
Translates to: PPSEAFGTHTFNTRQGRFLRTKF*VIRIEA
Trigger: GGCCTCTATCCTAATGACTCAAAACTTGGTTCTTAA...GAAGCGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp CCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAGCAGCACTGGCTATCACTTGGTAAAACGTTaGGAGTATTTCTTTTCTCGA +
Preference number: 2 (lower is better)
Translates to: PKCLNTVPEVPPGSSTGYHLVKR*EYFFSR
Trigger: TCGAGAAAAGAAATACTCTCAACGTTTTACCAAGTG...ATAGCCAGTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp GAAATCCATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCATGTTCTTGCAACACGTaGGGCAGCCTCAGTCCCGCT +
Preference number: 2 (lower is better)
Translates to: EIHAIWFKRQFLLEPDISCSCNT*GSLSPA
Trigger: AGCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACA...TGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATGGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp TGGCACACACACCTTCAATACACGTCAAGGTCGCTTCCAGTTTTAGAAAACAGACTCCTGTCCACAGTCTaGGAATCCCAAGTGTCTCAA +
Preference number: 2 (lower is better)
Translates to: WHTHLQYTSRSLPVLENRLLSTV*ESQVSQ
Trigger: TTGAGACACTTGGGATTCTCAGACTGTGGACAGGAG...TCTGTTTTCTAAAACTGGAAGCGACCTTGACGTGTATTGAAGGTGTGTGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CCA 90 bp CTTAGAGGAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACAAGGCCAAACAAAAGGTaGGCTTTCCTGTGTCCAGCG +
Preference number: 2 (lower is better)
Translates to: LRGARCQICKHWYKKIQTRPNKR*AFLCPA
Trigger: CGCTGGACACAGGAAAGCCCACCTTTTGTTTGGCCT...TGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR TCA 90 bp CATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTACATTCTCTTCCCATGTGTaGACGGGATGTACCGGTACT +
Preference number: 2 (lower is better)
Translates to: HAIWFKRQFLLEPDISVTFSSHV*TGCTGT
Trigger: AGTACCGGTACATCCCGTTCACACATGGGAAGAGAA...TGTAACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378512.5
ENST00000378513.7
3UTR-3UTR TCA 90 bp CAAACCATGTCTTGCTGTTTGACTTACTTAGGAATGAGGATGACCCTGTATTCCAAACAGTATGAAAAATaGCAAACACTCCTGTCCACA +
Preference number: 2 (lower is better)
Translates to: QTMSCCLTYLGMRMTLYSKQYEK*QTLLST
Trigger: TGTGGACAGGAGTGTTTGTCATTTTTCATACTGTTT...GGAATACAGGGTCATCCTCATTCCTAAGTAAGTCAAACAGCAAGACATGGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR GCA 90 bp ATCCATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTATCATGTGCTTGATTTaGCTCTTCATCGTGATACAG +
Preference number: 2 (lower is better)
Translates to: IHAIWFKRQFLLEPDISVIMCLI*LFIVIQ
Trigger: CTGTATCACGATGAAGAGGCAAATCAAGCACATGAT...AACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378512.5
ENST00000378513.7
3UTR GCA 72 bp CTCGGGCTCTGTGGAGTGGCTGGCACCACCTGCGGCTaGTGGGGAAGGCGGCTGGCGGGGAGCGGCCCGTTC +
Preference number: 3 (lower is better)
Translates to: LGLCGVAGTTCG*WGRRLAGSGPF
Trigger: GAACGGGCCGCTCCCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGCCCGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CAA 90 bp CTCTGTGGAGTGGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGGACCGGCCACTCGCCCTaGCTCCCATGGGCTCCACCC +
Preference number: 3 (lower is better)
Translates to: LCGVAGTTCGCWGRRLAGTGHSP*LPWAPP
Trigger: GGGTGGAGCCCATGGGAGCAAGGGCGAGTGGCCGGT...CCCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CAA 90 bp GCTCTGTGGAGTGGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGCCTCCCTCGCAGGCCTaGCTCCTGCCTGCCCACCTG +
Preference number: 3 (lower is better)
Translates to: ALWSGWHHLRLLGKAAGGPPSQA*LLPAHL
Trigger: CAGGTGGGCAGGCAGGAGCAAGGCCTGCGAGGGAGG...CCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
3UTR GCA 72 bp GCCTGCTGGGCAGGCGACCTGCTGACCCACGGTCACTaGTGTGTTCAGCCCCTCAGCTCGGCCCCAGCCTAT +
Preference number: 3 (lower is better)
Translates to: ACWAGDLLTHGH*CVQPLSSAPAY
Trigger: ATAGGCTGGGGCCGAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAGCAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CAA 90 bp GCTCTGTGGAGTGGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGTTGCCGGCATCCTCCTaGCCTCTGTACCTTCTCTTC +
Preference number: 3 (lower is better)
Translates to: ALWSGWHHLRLLGKAAGGLPASS*PLYLLF
Trigger: GAAGAGAAGGTACAGAGGCAAGGAGGATGCCGGCAA...CCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378512.5
ENST00000378513.7
3UTR CCA 72 bp GGAATCAGGCTAGATCATCCCTCGGGCTCTGTGGAGTaGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGC +
Preference number: 3 (lower is better)
Translates to: GIRLDHPSGSVE*LAPPAAAGEGG
Trigger: GCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGCCCGAGGGATGATCTAGCCTGATTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CAA 90 bp CATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCTCCCTCGCAGGCCTaGCTCCTGCCTGCCCACCTG +
Preference number: 3 (lower is better)
Translates to: HFPADVKHLASRTGFRQRPPSQA*LLPAHL
Trigger: CAGGTGGGCAGGCAGGAGCAAGGCCTGCGAGGGAGG...TCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR TCA 72 bp GCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCCTaGCCCAGACGCACTCACGAGCCAGGTCCTGGGGGT +
Preference number: 3 (lower is better)
Translates to: ASQPETHREVSS*PRRTHEPGPGG
Trigger: ACCCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR GCA 72 bp TGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTaGTTCACTGTGCTCTGGCCAAGCGCGTGCGACTTC +
Preference number: 3 (lower is better)
Translates to: CRRGSIHQHPVL*FTVLWPSACDF
Trigger: GAAGTCGCACGCGCTTGGCCAGAGCACAGTGAAGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR GCA 72 bp GCTCCATCCATCAGCACCCAGTCCTTTGCTTCACTGTaGTCTGGCCAAGCGCGTGCGACTTCCTGTCACACC +
Preference number: 3 (lower is better)
Translates to: APSISTQSFASL*SGQARATSCHT
Trigger: GGTGTGACAGGAAGTCGCACGCGCTTGGCCAGAGCACAGTGAAGCAAAGGACTGGGTGCTGATGGATGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CAA 90 bp TGTCAGTGTCTCATCTGGGACCACAGCTGTGATGTTCTGCTGTGCAATATGGGTCCTCCCTCGCAGGCCTaGCTCCTGCCTGCCCACCTG +
Preference number: 3 (lower is better)
Translates to: CQCLIWDHSCDVLLCNMGPPSQA*LLPAHL
Trigger: CAGGTGGGCAGGCAGGAGCAAGGCCTGCGAGGGAGG...ACCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACACTGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR GCA 72 bp CCAGTCCTTTGCTTCACTGTGCTCTGGCCAAGCGCGTaGGACTTCCTGTCACACCTTAGGCCTGAGCGCTTA +
Preference number: 3 (lower is better)
Translates to: PVLCFTVLWPSA*DFLSHLRPERL
Trigger: TAAGCGCTCAGGCCTAAGGTGTGACAGGAAGTCGCACGCGCTTGGCCAGAGCACAGTGAAGCAAAGGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR CCA 72 bp ATCCATCAGCACCCAGTCCTTTGCTTCACTGTGCTCTaGCCAAGCGCGTGCGACTTCCTGTCACACCTTAGG +
Preference number: 3 (lower is better)
Translates to: IHQHPVLCFTVL*PSACDFLSHLR
Trigger: CCTAAGGTGTGACAGGAAGTCGCACGCGCTTGGCCAGAGCACAGTGAAGCAAAGGACTGGGTGCTGATGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR CCA 72 bp TCCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTaGGAGCAGCACTGGCTATCTTGGGTCAGGGACACA +
Preference number: 3 (lower is better)
Translates to: SQVSQHGTRSTT*EQHWLSWVRDT
Trigger: TGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CAA 90 bp CAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCCGCGCAAACCATGTCTaGCTGTTTGACTTACTTAGG +
Preference number: 3 (lower is better)
Translates to: QDLMTTRGREKPTKASTSRANHV*LFDLLR
Trigger: CCTAAGTAAGTCAAACAGCAAGACATGGTTTGCGCG...GGAGGTGCTGGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CAA 90 bp CCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCCCACACAGTTACTaGACAATCACCTTTAAAACG +
Preference number: 3 (lower is better)
Translates to: PRGRVPHFPADVKHLASRTPHSY*TITFKT
Trigger: CGTTTTAAAGGTGATTGTCAAGTAACTGTGTGGGGT...CCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CAA 90 bp CTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCAACACAAGATGGAACTaGAGATTTCCTGAAGCGCAG +
Preference number: 3 (lower is better)
Translates to: LHLSLRRTERSLPDPDALNTRWN*RFPEAQ
Trigger: CTGCGCTTCAGGAAATCTCAAGTTCCATCTTGTGTT...GAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR GCA 72 bp ACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCTTaGTGTTTGACTTACTTAGGAATGAGGATGACCCTG +
Preference number: 3 (lower is better)
Translates to: TGFRQRPAQTMS*CLTYLGMRMTL
Trigger: CAGGGTCATCCTCATTCCTAAGTAAGTCAAACAGCAAGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR CCA 72 bp GAGGAGAGGCCTTCACTCGCATGTCAGTGTCTCATCTaGGACCACAGCTGTGATGTTCTGCTGTGCAATATG +
Preference number: 3 (lower is better)
Translates to: EERPSLACQCLI*DHSCDVLLCNM
Trigger: CATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACACTGACATGCGAGTGAAGGCCTCTCCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR TCA 72 bp TTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTaGGGCAGCCTCAGTCCCGCTTCTAGCTGGCGAAGG +
Preference number: 3 (lower is better)
Translates to: LLTMAQNCSCNT*GSLSPASSWRR
Trigger: CCTTCGCCAGCTAGAAGCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378512.5
ENST00000378513.7
3UTR GCA 72 bp GTCAGTGTCTCATCTGGGACCACAGCTGTGATGTTCTaGTGTGCAATATGGGTCACCTTTCGAAAAGGCCAA +
Preference number: 3 (lower is better)
Translates to: VSVSSGTTAVMF*CAIWVTFRKGQ
Trigger: TTGGCCTTTTCGAAAGGTGACCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACACTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR CCA 72 bp TCTGGGACCACAGCTGTGATGTTCTGCTGTGCAATATaGGTCACCTTTCGAAAAGGCCAAACAAAAGGTGGG +
Preference number: 3 (lower is better)
Translates to: SGTTAVMFCCAI*VTFRKGQTKGG
Trigger: CCCACCTTTTGTTTGGCCTTTTCGAAAGGTGACCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CAA 90 bp ATGTCTTGCTGTTTGACTTACTTAGGAATGAGGATGACCCTGTATTCCTGGGTTGCAGCACTGGCTATCTaGGGTCAGGGACACACAAGC +
Preference number: 3 (lower is better)
Translates to: MSCCLTYLGMRMTLYSWVAALAI*GQGHTS
Trigger: GCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGC...AACCCAGGAATACAGGGTCATCCTCATTCCTAAGTAAGTCAAACAGCAAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR GCA 72 bp TGTCTCATCTGGGACCACAGCTGTGATGTTCTGCTGTaGAATATGGGTCACCTTTCGAAAAGGCCAAACAAA +
Preference number: 3 (lower is better)
Translates to: CLIWDHSCDVLL*NMGHLSKRPNK
Trigger: TTTGTTTGGCCTTTTCGAAAGGTGACCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CAA 90 bp CTTAGAGGAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACAGGCTCAAAACTGTTCTaGCAACACGTGAGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: LRGARCQICKHWYKKIQTGSKLF*QHVRQP
Trigger: AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCC...TGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CAA 90 bp AGTTACTTGACAATCACCTTTAAAACGTTAAGTTCTTTCGGACACGCAGGAATCGGCTCAAAACTGTTCTaGCAACACGTGAGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: SYLTITFKTLSSFGHAGIGSKLF*QHVRQP
Trigger: AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCC...GATTCCTGCGTGTCCGAAAGAACTTAACGTTTTAAAGGTGATTGTCAAGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CAA 90 bp GAAATCCATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGGCTCAAAACTGTTCTaGCAACACGTGAGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: EIHAIWFKRQFLLEPDISGSKLF*QHVRQP
Trigger: AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCC...TGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATGGATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CAA 90 bp AGAGAGTTCACCGTAGGCATCTTTAATAAACTAACTCCAGCAAAATGTGGGTACGCCCCTCATGGAGGGTaGCATGAGGACAGATTTAAA +
Preference number: 3 (lower is better)
Translates to: REFTVGIFNKLTPAKCGYAPHGG*HEDRFK
Trigger: TTTAAATCTGTCCTCATGCAACCCTCCATGAGGGGC...GTACCCACATTTTGCTGGAGTTAGTTTATTAAAGATGCCTACGGTGAACTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR-3UTR CAA 90 bp TGTCAGTGTCTCATCTGGGACCACAGCTGTGATGTTCTGCTGTGCAATATGGGTTCACTTGGTAAAACGTaGAGAGTATTTCTTTTCTCG +
Preference number: 3 (lower is better)
Translates to: CQCLIWDHSCDVLLCNMGSLGKT*RVFLFS
Trigger: CGAGAAAAGAAATACTCTCAACGTTTTACCAAGTGA...ACCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACACTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR TCA 72 bp CTGCAGCTGACTAGAATTCCATCCGTGAGAAACACTTaGACGTCACTGAAAAAGAAATCCATGCGATTTGGT +
Preference number: 3 (lower is better)
Translates to: LQLTRIPSVRNT*TSLKKKSMRFG
Trigger: ACCAAATCGCATGGATTTCTTTTTCAGTGACGTTCAAGTGTTTCTCACGGATGGAATTCTAGTCAGCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
3UTR TCA 72 bp GTCATTAGGATAGAGGCCAACTTTAAACATCTCCAGTaGGATGGAATTAGGAAACTGGCATTAGAACCCCAC +
Preference number: 3 (lower is better)
Translates to: VIRIEANFKHLQ*DGIRKLALEPH
Trigger: GTGGGGTTCTAATGCCAGTTTCCTAATTCCATCTCACTGGAGATGTTTAAAGTTGGCCTCTATCCTAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
3UTR CCA 72 bp CCTCTTAGAGGAGCTCGATGTCAGATATGTAAACACTaGTACAAGAAAATCCAGACACTAAGCATTCACCGT +
Preference number: 3 (lower is better)
Translates to: PLRGARCQICKH*YKKIQTLSIHR
Trigger: ACGGTGAATGCTTAGTGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR TCA 72 bp CAAAATGTGGGTACGTTACTAACACAAGATGGAACTTaGGATTTCCTGAAGCGCAGTGTTAAAATGCCTCGA +
Preference number: 3 (lower is better)
Translates to: QNVGTLLTQDGT*DFLKRSVKMPR
Trigger: TCGAGGCATTTTAACACTGCGCTTCAGGAAATCTCAAGTTCCATCTTGTGTTAGTAACGTACCCACATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
3UTR TCA 72 bp GAAGTAGGCCAGAAGACACTTTATTCGTTTATATTGTaGGAAAACAGCCCCATCAGGCTTGTGTTAAGGCAA +
Preference number: 3 (lower is better)
Translates to: EVGQKTLYSFIL*ENSPIRLVLRQ
Trigger: TTGCCTTAACACAAGCCTGATGGGGCTGTTTTCTCACAATATAAACGAATAAAGTGTCTTCTGGCCTACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378513.7
CDS-3UTR GCA 90 bp CTGCCCACCTGGCACAGCGGGGACCGGCCACTCGCCCTTGCTCCCATGGGCTCCAGAGGCACTGGGGGCTaGGGCCGGGTGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: LPTWHSGDRPLALAPMGSRGTGG*GRVGRC
Trigger: GCATCTGCCCACCCGGCCGCAGCCCCCAGTGCCTCT...GGAGCCCATGGGAGCAAGGGCGAGTGGCCGGTCCCCGCTGTGCCAGGTGGGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp CTGCCCACCTGGCACAGCGGGGACCGGCCACTCGCCCTTGCTCCCATGGGCTCCCTCCCCGAGGGCGGCTaGGCAGAGCACATCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LPTWHSGDRPLALAPMGSLPEGG*AEHIPQ
Trigger: CTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAG...GGAGCCCATGGGAGCAAGGGCGAGTGGCCGGTCCCCGCTGTGCCAGGTGGGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp CTGCCCACCTGGCACAGCGGGGACCGGCCACTCGCCCTTGCTCCCATGGGCTCCTGTTCTTGCAACACGTaGGGCAGCCTCAGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: LPTWHSGDRPLALAPMGSCSCNT*GSLSPA
Trigger: AGCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACA...GGAGCCCATGGGAGCAAGGGCGAGTGGCCGGTCCCCGCTGTGCCAGGTGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp CTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCAAACACCGCCCAGAGTaGGGAGCCTGCGCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: LGRRPADPRSLLCSAPQLKHRPE*GACAAR
Trigger: CCGGGCTGCGCAGGCTCCTCACTCTGGGCGGTGTTT...GAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp AGCCTCAGTCCCGCTTCTAGCTGGCGAAGGCCTTGCCGGCATCCTCCTTGCCTCCCGGCCACTCGCCCTTaGTCCCATGGGCTCCACCCG +
Preference number: 4 (lower is better)
Translates to: SLSPASSWRRPCRHPPCLPATRP*SHGLHP
Trigger: CGGGTGGAGCCCATGGGAGCAAGGGCGAGTGGCCGG...GAGGCAAGGAGGATGCCGGCAAGGCCTTCGCCAGCTAGAAGCGGGACTGAGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378512.5
ENST00000378513.7
CDS-3UTR CCA 90 bp GCTCTGTGGAGTGGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGTGCTTCACTGTGCTCTaGCCAAGCGCGTGCGACTTC +
Preference number: 4 (lower is better)
Translates to: ALWSGWHHLRLLGKAAGGCFTVL*PSACDF
Trigger: GAAGTCGCACGCGCTTGGCCAGAGCACAGTGAAGCA...CCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp CTCTGTGGAGTGGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGGGCCACATTTCCCTGCTaGCGTAAAACACCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LCGVAGTTCGCWGRRLAGATFPC*RKTPGQ
Trigger: CTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGC...CCCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp GCTCTGTGGAGTGGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGCAGCACCCAGTCCTTTaGTTCACTGTGCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ALWSGWHHLRLLGKAAGGQHPVL*FTVLWP
Trigger: TGGCCAGAGCACAGTGAAGCAAAGGACTGGGTGCTG...CCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp CTCTGTGGAGTGGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGGCAGCCGTGTAGGGTGTaGACTTGTCTAGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: LCGVAGTTCGCWGRRLAGQPCRV*TCLART
Trigger: AGTCCTGGCTAGACAAGTCCACACCCTACACGGCTG...CCCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GGCAGCCTCAGTCCCGCTTCTAGCTGGCGAAGGCCTTGCCGGCATCCTCCTTGCGGGCAGATGCCGCCGTaGCTCCATCCATCAGCACCC +
Preference number: 4 (lower is better)
Translates to: GSLSPASSWRRPCRHPPCGQMPP*LHPSAP
Trigger: GGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCC...GCAAGGAGGATGCCGGCAAGGCCTTCGCCAGCTAGAAGCGGGACTGAGGCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378513.7
CDS-3UTR GCA 90 bp CAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCCATGGGAGGCGGCGCTaGTCTCCCCGAGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: QDLMTTRGREKPTKASTSHGRRR*SPRGRL
Trigger: CAGCCGCCCTCGGGGAGAGCAGCGCCGCCTCCCATG...GGAGGTGCTGGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp CTGCCCACCTGGCACAGCGGGGACCGGCCACTCGCCCTTGCTCCCATGGGCTCCCCTCGTTCTGTTTGGTaGGTAGCGAAGGACCGTCAT +
Preference number: 4 (lower is better)
Translates to: LPTWHSGDRPLALAPMGSPRSVW*VAKDRH
Trigger: ATGACGGTCCTTCGCTACCCACCAAACAGAACGAGG...GGAGCCCATGGGAGCAAGGGCGAGTGGCCGGTCCCCGCTGTGCCAGGTGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp GCTCTGTGGAGTGGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGTTCTCTTCCCATGTGTaGACGGGATGTACCGGTACT +
Preference number: 4 (lower is better)
Translates to: ALWSGWHHLRLLGKAAGGFSSHV*TGCTGT
Trigger: AGTACCGGTACATCCCGTTCACACATGGGAAGAGAA...CCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp CGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCCGGCCACTCGCCCTTaGTCCCATGGGCTCCACCCG +
Preference number: 4 (lower is better)
Translates to: RVPHFPADVKHLASRTGFPATRP*SHGLHP
Trigger: CGGGTGGAGCCCATGGGAGCAAGGGCGAGTGGCCGG...GAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp CGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCTCCTGCCTGCCCACCTaGCACAGCGGGGACCGGCCA +
Preference number: 4 (lower is better)
Translates to: RVPHFPADVKHLASRTGFSCLPT*HSGDRP
Trigger: TGGCCGGTCCCCGCTGTGCCAGGTGGGCAGGCAGGA...GAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GGTGGGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCTTCACGGGCAGATGCCGCCGTaGCTCCATCCATCAGCACCC +
Preference number: 4 (lower is better)
Translates to: GGQMPPWLHPSAPSPLLHGQMPP*LHPSAP
Trigger: GGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCC...GTGAAGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp GCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCGGGCAGGCGACCTGCTaGCCCACGGTCACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: AEHIPQDLMTTRGREKPTGQATC*PTVTAV
Trigger: CACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCC...GGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp CATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCGGCAAAGACCGGCCACTCGCCCTTaGTCCCATGGGCTCCACCCG +
Preference number: 4 (lower is better)
Translates to: HFPADVKHLASRTGFRQRPATRP*SHGLHP
Trigger: CGGGTGGAGCCCATGGGAGCAAGGGCGAGTGGCCGG...TCTTTGCCGGAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp GACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCGGCCCCAGCCAGCGCAGTGTTAAAATaGCTCGAGGGCGTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: DLLTHGHCCVQPLSSAPASAVLK*LEGVCH
Trigger: GTGGCACACGCCCTCGAGGCATTTTAACACTGCGCT...GGCTGGGGCCGAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GGCAGCCTCAGTCCCGCTTCTAGCTGGCGAAGGCCTTGCCGGCATCCTCCTTGCCCGCATGCCTTCAAGTaGGGAGAGAAGGTTAGCGCC +
Preference number: 4 (lower is better)
Translates to: GSLSPASSWRRPCRHPPCPHAFK*GEKVSA
Trigger: GGCGCTAACCTTCTCTCCCCACTTGAAGGCATGCGG...GCAAGGAGGATGCCGGCAAGGCCTTCGCCAGCTAGAAGCGGGACTGAGGCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378512.5
CDS-3UTR CCA 90 bp AAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCCCAGGGCCCCCAAGATaGCGCGAGGGCGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: KMPRGRVPHFPADVKHLAPGPPR*REGGAK
Trigger: CTTGGCCCCGCCCTCGCGCCATCTTGGGGGCCCTGG...GGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000378513.7
CDS-3UTR CCA 90 bp CTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCACCTGGGAGCAGCACTaGCTATCTTGGGTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LGRRPADPRSLLCSAPQLTWEQH*LSWVRD
Trigger: GTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGT...GAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp CTGCCCACCTGGCACAGCGGGGACCGGCCACTCGCCCTTGCTCCCATGGGCTCCCCCCTCATGGAGGGTTaGATGAGGACAGATTTAAAT +
Preference number: 4 (lower is better)
Translates to: LPTWHSGDRPLALAPMGSPLMEG*MRTDLN
Trigger: ATTTAAATCTGTCCTCATGCAACCCTCCATGAGGGG...GGAGCCCATGGGAGCAAGGGCGAGTGGCCGGTCCCCGCTGTGCCAGGTGGGCAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp CTCTGTGGAGTGGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGGTGTGATGTTCTGCTGTaGAATATGGGTCACCTTTCG +
Preference number: 4 (lower is better)
Translates to: LCGVAGTTCGCWGRRLAGCDVLL*NMGHLS
Trigger: CGAAAGGTGACCCATATTGCACAGCAGAACATCACA...CCCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GGGGCCCAGGAGGAGAGGCCTTCACTCGCATGTCAGTGTCTCATCTGGGACCACAGTCCCGCTTCTAGCTaGCGAAGGCCTTGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: GAQEERPSLACQCLIWDHSPASS*RRPCRH
Trigger: ATGCCGGCAAGGCCTTCGCCAGCTAGAAGCGGGACT...GTGGTCCCAGATGAGACACTGACATGCGAGTGAAGGCCTCTCCTCCTGGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp GCTCTGTGGAGTGGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGCCCCACACAGTTACTTaGCAATCACCTTTAAAACGT +
Preference number: 4 (lower is better)
Translates to: ALWSGWHHLRLLGKAAGGPHTVT*QSPLKR
Trigger: ACGTTTTAAAGGTGATTGTCAAGTAACTGTGTGGGG...CCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp CTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCGTTAAGGCAATGGACTaGATGAGTGCGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LGRRPADPRSLLCSAPQLVKAMD*MSACWV
Trigger: CACCCAGCACGCACTCATTCAGTCCATTGCCTTAAC...GAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp GGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAACTGACCCACGGTCACTaGTGTGTTCAGCCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: GWAEHIPQDLMTTRGREKLTHGH*CVQPLS
Trigger: GCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAG...TTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp CGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCATCCCTCGGGCTCTGTaGAGTGGCTGGCACCACCTG +
Preference number: 4 (lower is better)
Translates to: RVPHFPADVKHLASRTGFIPRAL*SGWHHL
Trigger: CAGGTGGTGCCAGCCACTCCACAGAGCCCGAGGGAT...GAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp CTGCCCACCTGGCACAGCGGGGACCGGCCACTCGCCCTTGCTCCCATGGGCTCCTTAAGAACCAAGTTTTaGGTCATTAGGATAGAGGCC +
Preference number: 4 (lower is better)
Translates to: LPTWHSGDRPLALAPMGSLRTKF*VIRIEA
Trigger: GGCCTCTATCCTAATGACTCAAAACTTGGTTCTTAA...GGAGCCCATGGGAGCAAGGGCGAGTGGCCGGTCCCCGCTGTGCCAGGTGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp CCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGTCCTTTGCTTCACTGTaGTCTGGCCAAGCGCGTGCG +
Preference number: 4 (lower is better)
Translates to: PRGRVPHFPADVKHLASRSFASL*SGQARA
Trigger: CGCACGCGCTTGGCCAGAGCACAGTGAAGCAAAGGA...CCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp CAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCCTGACCCACGGTCACTaGTGTGTTCAGCCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: QDLMTTRGREKPTKASTSLTHGH*CVQPLS
Trigger: GCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAG...GGAGGTGCTGGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp CCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGGTTTTGCTCTGTGGAGTGGCTaGCACCACCTGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PSARPQPISRLHLMFPGFALWSG*HHLRLL
Trigger: CAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGC...AAAACCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCTTGAATCGGGCTCTGTGGAGTaGCTGGCACCACCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: VPPGSSTGYLGSGTHKLESGSVE*LAPPAA
Trigger: AGCCGCAGGTGGTGCCAGCCACTCCACAGAGCCCGA...TTCAAGCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp GCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCCTGGGAGCCTTCGAATaGAGGGGCGGAATTCCTCGT +
Preference number: 4 (lower is better)
Translates to: AEHIPQDLMTTRGREKPTLGAFE*RGGIPR
Trigger: ACGAGGAATTCCGCCCCTTCATTCGAAGGCTCCCAG...GGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp CAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCTGTTCTTGCAACACGTaGGGCAGCCTCAGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: QDLMTTRGREKPTKASTSCSCNT*GSLSPA
Trigger: AGCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACA...GGAGGTGCTGGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp CTCTGTGGAGTGGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGGCACTTGGTAAAACGTTaGGAGTATTTCTTTTCTCGA +
Preference number: 4 (lower is better)
Translates to: LCGVAGTTCGCWGRRLAGHLVKR*EYFFSR
Trigger: TCGAGAAAAGAAATACTCTCAACGTTTTACCAAGTG...CCCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp CCCGAGGGCGGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCTTTCCCGCCTCCATTTaGTGTTTCCAGGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: PEGGWAEHIPQDLMTTRGFPASI*CFQVFK
Trigger: TTTGAAAACCTGGAAACATCAAATGGAGGCGGGAAA...GCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp GCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAGAGAGGTCTCTTCCTaGCCCAGACGCACTCACGAG +
Preference number: 4 (lower is better)
Translates to: AEHIPQDLMTTRGREKPTREVSS*PRRTHE
Trigger: CTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCT...GGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp CCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGATCTGCATCTCAGCCTaGGACGCACAGAGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: PRGRVPHFPADVKHLASRICISA*DAQRGL
Trigger: GAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAGAT...CCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp CTTGGGTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCCCCTGCCAGCTTCGCTaGCCCTCATGGAGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: LGSGTHKLERGLLEELDVPCQLR*PSWRVA
Trigger: TGCAACCCTCCATGAGGGGCAGCGAAGCTGGCAGGG...GACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp GTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCTTGAAAGCCAGTCTGCTCCCTaGCAGCTTCGCTGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: VPPGSSTGYLGSGTHKLESQSAP*QLRCPS
Trigger: TGAGGGGCAGCGAAGCTGGCAGGGAGCAGACTGGCT...TTCAAGCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp CAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCTCCTTTGCTTCACTGTaGTCTGGCCAAGCGCGTGCG +
Preference number: 4 (lower is better)
Translates to: QDLMTTRGREKPTKASTSSFASL*SGQARA
Trigger: CGCACGCGCTTGGCCAGAGCACAGTGAAGCAAAGGA...GGAGGTGCTGGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp CCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAGCAGCACTGGCTATCGGAGGCTGGCGGGTTaGTTCAGCCAGTGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: PKCLNTVPEVPPGSSTGYRRLAG*FSQCSE
Trigger: CTCACTGCACTGGCTGAAGCAACCCGCCAGCCTCCG...ATAGCCAGTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp AGCACCTCCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGTCGGGCTCTGTGGAGTaGCTGGCACCACCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: STSVGSIWHTHLQYTSRSSGSVE*LAPPAA
Trigger: AGCCGCAGGTGGTGCCAGCCACTCCACAGAGCCCGA...CGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp CTTGGGTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCATCCCTCGGGCTCTGTaGAGTGGCTGGCACCACCTG +
Preference number: 4 (lower is better)
Translates to: LGSGTHKLERGLLEELDVIPRAL*SGWHHL
Trigger: CAGGTGGTGCCAGCCACTCCACAGAGCCCGAGGGAT...GACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp TGTCAGTGTCTCATCTGGGACCACAGCTGTGATGTTCTGCTGTGCAATATGGGTAAACACCGCCCAGAGTaGGGAGCCTGCGCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: CQCLIWDHSCDVLLCNMGKHRPE*GACAAR
Trigger: CCGGGCTGCGCAGGCTCCTCACTCTGGGCGGTGTTT...ACCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACACTGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp CCTCCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGCTTCCTTCAGCCAGTGCAGTaGGAACAGCAGCCCCACGGC +
Preference number: 4 (lower is better)
Translates to: PPSEAFGTHTFNTRQGRFLQPVQ*EQQPHG
Trigger: GCCGTGGGGCTGCTGTTCTCACTGCACTGGCTGAAG...GAAGCGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCAGAGGAAGGGCAGCGTaGGACGCATGGGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRRGRAA*DAWAQE
Trigger: CTCCTGGGCCCATGCGTCTCACGCTGCCCTTCCTCT...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR GCA 90 bp CAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCCAGCACCCAGTCCTTTaGTTCACTGTGCTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QDLMTTRGREKPTKASTSQHPVL*FTVLWP
Trigger: TGGCCAGAGCACAGTGAAGCAAAGGACTGGGTGCTG...GGAGGTGCTGGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp TTCCCATGTGTGAACGGGATGTACCGGTACTTAATCATGTGCTTGATTTGCCTCCATGGGAGGCGGCGCTaGTCTCCCCGAGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: FPCVNGMYRYLIMCLICLHGRRR*SPRGRL
Trigger: CAGCCGCCCTCGGGGAGAGCAGCGCCGCCTCCCATG...GAGGCAAATCAAGCACATGATTAAGTACCGGTACATCCCGTTCACACATGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378513.7
CDS-3UTR CCA 90 bp AGGACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCTTGCTGTTTGACTTACAGTCCCGCTTCTAGCTaGCGAAGGCCTTGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: RTGFRQRPAQTMSCCLTYSPASS*RRPCRH
Trigger: ATGCCGGCAAGGCCTTCGCCAGCTAGAAGCGGGACT...GTAAGTCAAACAGCAAGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCGCTCTGTGGAGTGGCTaGCACCACCTGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRALWSG*HHLRLL
Trigger: CAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGC...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp AAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCACGCTGACATGCAAGTaGGTTCCGCCTCTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: KMPRGRVPHFPADVKHLATLTCK*VPPLPQ
Trigger: CTGCGGGAGAGGCGGAACCCACTTGCATGTCAGCGT...GGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCTTCACTGTGCAGCACTGGCTATCTTaGGTCAGGGACACACAAGCT +
Preference number: 4 (lower is better)
Translates to: GRCRRGSIHQHPVLCFTVQHWLS*VRDTQA
Trigger: AGCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTG...CACAGTGAAGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp CCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGCAGCACTGGCTATCTTaGGTCAGGGACACACAAGCT +
Preference number: 4 (lower is better)
Translates to: PRGRVPHFPADVKHLASRQHWLS*VRDTQA
Trigger: AGCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTG...CCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GGCTTCCGGCAAAGACCCGCGCAAACCATGTCTTGCTGTTTGACTTACTTAGGAGTGGGGCACGGAGGCTaGCGGGTTGCTTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GFRQRPAQTMSCCLTYLGVGHGG*RVASAS
Trigger: ACTGGCTGAAGCAACCCGCCAGCCTCCGTGCCCCAC...TCCTAAGTAAGTCAAACAGCAAGACATGGTTTGCGCGGGTCTTTGCCGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCGACTGTCCACCCCACTaGCCCCAGGAGCAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRDCPPH*PQEQPC
Trigger: GCAAGGCTGCTCCTGGGGCCAGTGGGGTGGACAGTC...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR TCA 90 bp GGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCGTAGGGACACACAAGCTTaGACGTGGCCTCTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: GLDDHTGQRETNQGQHLRRDTQA*TWPLRG
Trigger: TCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCT...ACGGAGGTGCTGGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTGGCACCACCTGCGGCTaGTGGGGAAGGCGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPGTTCG*WGRRLA
Trigger: CGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCC...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp GAAGTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCTTCTCTGGCCAAGCGCGTaGGACTTCCTGTCACACCTT +
Preference number: 4 (lower is better)
Translates to: EVPPGSSTGYLGSGTHKLLWPSA*DFLSHL
Trigger: AAGGTGTGACAGGAAGTCGCACGCGCTTGGCCAGAG...AAGCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp GCGTGCGACTTCCTGTCACACCTTAGGCCTGAGCGCTTATTAAGAAAACAGTATGGCCGGGTGGGCAGATaGCGCCGTGGCTCCATCCAT +
Preference number: 4 (lower is better)
Translates to: ACDFLSHLRPERLLRKQYGRVGR*RRGSIH
Trigger: ATGGATGGAGCCACGGCGGCATCTGCCCACCCGGCC...ATACTGTTTTCTTAATAAGCGCTCAGGCCTAAGGTGTGACAGGAAGTCGCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GGTGGGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCTTCACTGTCAGTGTCTCATCTaGGACCACAGCTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: GGQMPPWLHPSAPSPLLHCQCLI*DHSCDV
Trigger: AACATCACAGCTGTGGTCCCAGATGAGACACTGACA...GTGAAGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GAAGTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCTTTGCTTCACTGTGCTCTaGCCAAGCGCGTGCGACTTC +
Preference number: 4 (lower is better)
Translates to: EVPPGSSTGYLGSGTHKLCFTVL*PSACDF
Trigger: GAAGTCGCACGCGCTTGGCCAGAGCACAGTGAAGCA...AAGCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTACTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCCAGCCTTGCTGGCCATaGGGTCCACTGGCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRQPCWP*GPLAGP
Trigger: TGGACCAGCCAGTGGACCCCATGGCCAGCAAGGCTG...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR TCA 90 bp CAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCAAGGCCAGCACCTCCTTCTCTTCCCATGTGTaGACGGGATGTACCGGTACT +
Preference number: 4 (lower is better)
Translates to: QDLMTTRGREKPTKASTSFSSHV*TGCTGT
Trigger: AGTACCGGTACATCCCGTTCACACATGGGAAGAGAA...GGAGGTGCTGGCCTTGGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp GGCAGCCTCAGTCCCGCTTCTAGCTGGCGAAGGCCTTGCCGGCATCCTCCTTGCTTAAGAACCAAGTTTTaGGTCATTAGGATAGAGGCC +
Preference number: 4 (lower is better)
Translates to: GSLSPASSWRRPCRHPPCLRTKF*VIRIEA
Trigger: GGCCTCTATCCTAATGACTCAAAACTTGGTTCTTAA...GCAAGGAGGATGCCGGCAAGGCCTTCGCCAGCTAGAAGCGGGACTGAGGCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378512.5
ENST00000378513.7
CDS-3UTR TCA 90 bp CGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCCTGGGACCACAGCTGTaGTGTTCTGCTGTGCAATAT +
Preference number: 4 (lower is better)
Translates to: RVPHFPADVKHLASRTGFLGPQL*CSAVQY
Trigger: ATATTGCACAGCAGAACATCACAGCTGTGGTCCCAG...GAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp AAAATGCCTCGAGGGCGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCATCTGCATCTCAGCCTaGGACGCACAGAGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: KMPRGRVPHFPADVKHLAICISA*DAQRGL
Trigger: GAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAGAT...GGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp TGTCAGTGTCTCATCTGGGACCACAGCTGTGATGTTCTGCTGTGCAATATGGGTCTTCAGCCAGTGCAGTaGGAACAGCAGCCCCACGGC +
Preference number: 4 (lower is better)
Translates to: CQCLIWDHSCDVLLCNMGLQPVQ*EQQPHG
Trigger: GCCGTGGGGCTGCTGTTCTCACTGCACTGGCTGAAG...ACCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACACTGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp TTTCTCGAATCAAAAACGCTGACATGCAAGTGGGTTCCGCCTCTCCCGCAGTGGAGGCAATGGACTGAATaGGTGCGTGCTGGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: FLESKTLTCKWVPPLPQWRQWTE*VRAGWG
Trigger: ACCCCACCCAGCACGCACTCATTCAGTCCATTGCCT...CCACTGCGGGAGAGGCGGAACCCACTTGCATGTCAGCGTTTTTGATTCGAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp CAAACCATGTCTTGCTGTTTGACTTACTTAGGAATGAGGATGACCCTGTATTCCGGCACCACCTGCGGCTaGTGGGGAAGGCGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: QTMSCCLTYLGMRMTLYSGTTCG*WGRRLA
Trigger: CGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCC...GGAATACAGGGTCATCCTCATTCCTAAGTAAGTCAAACAGCAAGACATGGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp GCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCTCAAAAACGCTGACATaGAAGTGGGTTCCGCCTCTC +
Preference number: 4 (lower is better)
Translates to: AEHIPQDLMTTRGREKPTSKTLT*KWVPPL
Trigger: GAGAGGCGGAACCCACTTGCATGTCAGCGTTTTTGA...GGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp CGAAAAGGCCAAACAAAAGGTGGGCTTTCCTGTGTCCAGCGACTGCCATGTTTTCGGAGGCTGGCGGGTTaGTTCAGCCAGTGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: RKGQTKGGLSCVQRLPCFRRLAG*FSQCSE
Trigger: CTCACTGCACTGGCTGAAGCAACCCGCCAGCCTCCG...AAAACATGGCAGTCGCTGGACACAGGAAAGCCCACCTTTTGTTTGGCCTTTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCGACGGCGTCAGGACCTaGCGCTCTTCGGTAAAGCAC +
Preference number: 4 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRDGVRT*RSSVKH
Trigger: GTGCTTTACCGAAGAGCGGCAGGTCCTGACGCCGTC...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR GCA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCCAAGCCAAGCCTGACTaGCACCTGGCTCCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRQAKPD*HLAPQL
Trigger: CAGCTGAGGAGCCAGGTGGCAGTCAGGCTTGGCTTG...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CCA 90 bp GGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGGCTCTGTGGAGTGGCTaGCACCACCTGCGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GIVNNGSKLFLQHVRQPQALWSG*HHLRLL
Trigger: CAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGC...CTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp AGCACCTCCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGACCTGGGAGCAGCACTaGCTATCTTGGGTCAGGGAC +
Preference number: 4 (lower is better)
Translates to: STSVGSIWHTHLQYTSRSTWEQH*LSWVRD
Trigger: GTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGT...CGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp CAGAAGTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCACCAGAAGTACCACCTaGGAGCAGCACTGGCTATCT +
Preference number: 4 (lower is better)
Translates to: QKYHLGAALAILGQGHTSTRSTT*EQHWLS
Trigger: AGATAGCCAGTGCTGCTCCCAGGTGGTACTTCTGGT...GCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTACTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGGGACCGCACCCTCTGTaGATCCCTCAGGGTTCCCCC +
Preference number: 4 (lower is better)
Translates to: GIVNNGSKLFLQHVRQPQGPHPL*IPQGSP
Trigger: GGGGGAACCCTGAGGGATCCACAGAGGGTGCGGTCC...CTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CCA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCATGGGGTCCACTGGCTaGTCCATGGCACGTGGCACT +
Preference number: 4 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRMGSTG*SMARGT
Trigger: AGTGCCACGTGCCATGGACCAGCCAGTGGACCCCAT...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
3UTR CAA 72 bp TACCAGAAGTACCACCTGGGAGCAGCACTGGCTATCTaGGGTCAGGGACACACAAGCTTGAACGTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: YQKYHLGAALAI*GQGHTSLNVAS
Trigger: AGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTACTTCTGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCCGCCACCCCACTCCTaGGAGGAGACGGCGTCAGGA +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPPPPHS*EETASG
Trigger: TCCTGACGCCGTCTCCTCTCAGGAGTGGGGTGGCGG...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR GCA 90 bp GCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCCCCTTGGTAGCCGCATaGCAAAATTTAAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: AEHIPQDLMTTRGREKPTPLVAA*QNLNSG
Trigger: CCCAGAGTTTAAATTTTGGCATGCGGCTACCAAGGG...GGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp GGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGCTCCAGCCTTGCAGCTaGACCGACCGTCCCCGCAAA +
Preference number: 4 (lower is better)
Translates to: GIVNNGSKLFLQHVRQPQLQPCS*TDRPRK
Trigger: TTTGCGGGGACGGTCGGTGCAGCTGCAAGGCTGGAG...CTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378512.5
CDS-3UTR GCA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCCATGGCACGTGGCACTaGATGTCCTCCCTCCAAGGA +
Preference number: 4 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRHGTWH*MSSLQG
Trigger: TCCTTGGAGGGAGGACATGCAGTGCCACGTGCCATG...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CCA 90 bp AGTATGAAAAATGACAAACACTCCTGTCCACAGTCTGAGAATCCCAAGTGTCTCTCCTGCCTGCCCACCTaGCACAGCGGGGACCGGCCA +
Preference number: 4 (lower is better)
Translates to: SMKNDKHSCPQSENPKCLSCLPT*HSGDRP
Trigger: TGGCCGGTCCCCGCTGTGCCAGGTGGGCAGGCAGGA...GAGACACTTGGGATTCTCAGACTGTGGACAGGAGTGTTTGTCATTTTTCATACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp CTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCTCCGTCGGAAGCATTTaGCACACACACCTTCAATAC +
Preference number: 4 (lower is better)
Translates to: LHLSLRRTERSLPDPDALSVGSI*HTHLQY
Trigger: GTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGA...GAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGCTCCACGCCCTGTCCTaGGTCTCTGGTCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GIVNNGSKLFLQHVRQPQLHALS*VSGLAG
Trigger: TCCTGCCAGACCAGAGACCCAGGACAGGGCGTGGAG...CTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CCA 90 bp ATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCCTCAGTCACCTGCGTaGGCGGGACTGTCCACCCCA +
Preference number: 4 (lower is better)
Translates to: IVNNGSKLFLQHVRQPQSPQSPA*AGLSTP
Trigger: TGGGGTGGACAGTCCCGCCCACGCAGGTGACTGAGG...GGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR TCA 90 bp CCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAGCAGCACTGGCTATAGAACACCGGGACGTTaGAAGCGTCGAAGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: PKCLNTVPEVPPGSSTGYRTPGR*KRRRKY
Trigger: GTACTTTCTTCGACGCTTTCAACGTCCCGGTGTTCT...ATAGCCAGTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp GGTGGGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCTTCACTCCGTGAGAAACACTTaGACGTCACTGAAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: GGQMPPWLHPSAPSPLLHSVRNT*TSLKKK
Trigger: TTTCTTTTTCAGTGACGTTCAAGTGTTTCTCACGGA...GTGAAGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp ATGTCTTGCTGTTTGACTTACTTAGGAATGAGGATGACCCTGTATTCCTGGGTTGGGCAGGCGACCTGCTaGCCCACGGTCACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: MSCCLTYLGMRMTLYSWVGQATC*PTVTAV
Trigger: CACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCC...AACCCAGGAATACAGGGTCATCCTCATTCCTAAGTAAGTCAAACAGCAAGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp TGTCAGTGTCTCATCTGGGACCACAGCTGTGATGTTCTGCTGTGCAATATGGGTAGGCAATGGACTGAATaGGTGCGTGCTGGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: CQCLIWDHSCDVLLCNMGRQWTE*VRAGWG
Trigger: ACCCCACCCAGCACGCACTCATTCAGTCCATTGCCT...ACCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACACTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCCAAAGCCAGGCCATCTaGAAGCCACCCGTCACATTG +
Preference number: 4 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRQSQAI*KPPVTL
Trigger: CAATGTGACGGGTGGCTTTCAGATGGCCTGGCTTTG...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR TCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTAGGCCTCCTGGCCCCTaGGCTAGAGAAGACGCCAGG +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPRPPGP*AREDAR
Trigger: CCTGGCGTCTTCTCTAGCTCAGGGGCCAGGAGGCCT...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR GCA 90 bp TGGCCTCTTAGAGGAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCTCCCTCGCAGGCCTTaGTCCTGCCTGCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: WPLRGARCQICKHWYKKILPRRP*SCLPTW
Trigger: CCAGGTGGGCAGGCAGGAGCAAGGCCTGCGAGGGAG...GATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp AGTATGAAAAATGACAAACACTCCTGTCCACAGTCTGAGAATCCCAAGTGTCTCGGCCGGGTGGGCAGATaGCGCCGTGGCTCCATCCAT +
Preference number: 4 (lower is better)
Translates to: SMKNDKHSCPQSENPKCLGRVGR*RRGSIH
Trigger: ATGGATGGAGCCACGGCGGCATCTGCCCACCCGGCC...GAGACACTTGGGATTCTCAGACTGTGGACAGGAGTGTTTGTCATTTTTCATACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp GGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCTTCACTGTGGCGCAAACCATGTCTTaGTGTTTGACTTACTTAGGA +
Preference number: 4 (lower is better)
Translates to: GRCRRGSIHQHPVLCFTVAQTMS*CLTYLG
Trigger: TCCTAAGTAAGTCAAACAGCAAGACATGGTTTGCGC...CACAGTGAAGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp CGTGTGCCACATTTCCCTGCTGACGTAAAACACCTGGCCAGCAGGACCGGCTTCAAACTGCATTTAACCTaGGCCAGAGAGTTCACCGTA +
Preference number: 4 (lower is better)
Translates to: RVPHFPADVKHLASRTGFKLHLT*AREFTV
Trigger: TACGGTGAACTCTCTGGCGCAGGTTAAATGCAGTTT...GAAGCCGGTCCTGCTGGCCAGGTGTTTTACGTCAGCAGGGAAATGTGGCACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCCCAGGCACCTTGTCTaGTCCACGCCCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPPRHLV*STPCPG
Trigger: CCCAGGACAGGGCGTGGAGCAGACAAGGTGCCTGGG...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR GCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTGGCACCTCAGTCACCTaGGTGGGCGGGACTGTCCAC +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPGTSVT*VGGTVH
Trigger: GTGGACAGTCCCGCCCACGCAGGTGACTGAGGTGCC...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CCA 90 bp AGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAGCAGCACTGGCTATCTTGCCTCGTTCTGTTTGGTaGGTAGCGAAGGACCGTCAT +
Preference number: 4 (lower is better)
Translates to: SVSTRYQKYHLGAALAILPRSVW*VAKDRH
Trigger: ATGACGGTCCTTCGCTACCCACCAAACAGAACGAGG...CAAGATAGCCAGTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp CTTGGGTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCATTCCTCGTTCTGTTTaGTGGGTAGCGAAGGACCGT +
Preference number: 4 (lower is better)
Translates to: LGSGTHKLERGLLEELDVIPRSV*WVAKDR
Trigger: ACGGTCCTTCGCTACCCACCAAACAGAACGAGGAAT...GACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCTTCACTGTGCCAAAATTTAAACTCTaGGAGCCTTCGAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: GRCRRGSIHQHPVLCFTVPKFKL*EPSNEG
Trigger: CCCTTCATTCGAAGGCTCCCAGAGTTTAAATTTTGG...CACAGTGAAGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp AGCACCTCCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGAGGCCAAACAAAAGGTaGGCTTTCCTGTGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: STSVGSIWHTHLQYTSRSRPNKR*AFLCPA
Trigger: CGCTGGACACAGGAAAGCCCACCTTTTGTTTGGCCT...CGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp AGCACCTCCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGACCAGAAGTACCACCTaGGAGCAGCACTGGCTATCT +
Preference number: 4 (lower is better)
Translates to: STSVGSIWHTHLQYTSRSTRSTT*EQHWLS
Trigger: AGATAGCCAGTGCTGCTCCCAGGTGGTACTTCTGGT...CGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp CAGAAGTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCTCCGTCGGAAGCATTTaGCACACACACCTTCAATAC +
Preference number: 4 (lower is better)
Translates to: QKYHLGAALAILGQGHTSSVGSI*HTHLQY
Trigger: GTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGA...GCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTACTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp CTTAGAGGAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTCCCCGAGGGCGGCTaGGCAGAGCACATCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LRGARCQICKHWYKKIQTLPEGG*AEHIPQ
Trigger: CTGGGGGATGTGCTCTGCCCAGCCGCCCTCGGGGAG...TGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTGTGGGGCACGGAGGCTaGCGGGTTGCTTCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPVGHGG*RVASAS
Trigger: ACTGGCTGAAGCAACCCGCCAGCCTCCGTGCCCCAC...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp ATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCGTGGAAGGCAACAGGTaGCCAGACGCAATCCCGCCC +
Preference number: 4 (lower is better)
Translates to: IVNNGSKLFLQHVRQPQSVEGNR*PDAIPP
Trigger: GGGCGGGATTGCGTCTGGCCACCTGTTGCCTTCCAC...GGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CCA 90 bp GGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGCTGGTCCATGGCACGTaGCACTGCATGTCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GIVNNGSKLFLQHVRQPQLVHGT*HCMSSL
Trigger: GAGGGAGGACATGCAGTGCCACGTGCCATGGACCAG...CTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
3UTR CAA 72 bp GACCGGCTTCCGGCAAAGACCCGCGCAAACCATGTCTaGCTGTTTGACTTACTTAGGAATGAGGATGACCCT +
Preference number: 4 (lower is better)
Translates to: DRLPAKTRANHV*LFDLLRNEDDP
Trigger: AGGGTCATCCTCATTCCTAAGTAAGTCAAACAGCAAGACATGGTTTGCGCGGGTCTTTGCCGGAAGCCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp GGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGCTGGGAGCCTTCGAATaGAGGGGCGGAATTCCTCGT +
Preference number: 4 (lower is better)
Translates to: GIVNNGSKLFLQHVRQPQLGAFE*RGGIPR
Trigger: ACGAGGAATTCCGCCCCTTCATTCGAAGGCTCCCAG...CTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000488353.2
ENST00000605895.6
CDS-3UTR TCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTAGAAGACGCCAGGGGTaGCGTTCACCTCCCCCACCA +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPRRRQG*RSPPPP
Trigger: TGGTGGGGGAGGTGAACGTCACCCCTGGCGTCTTCT...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR GCA 90 bp ATCCATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTGGCCGCCTCCAGCCTTaGAGCTGCACCGACCGTCCC +
Preference number: 4 (lower is better)
Translates to: IHAIWFKRQFLLEPDISVGRLQP*SCTDRP
Trigger: GGGACGGTCGGTGCAGCTGCAAGGCTGGAGGCGGCC...AACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378512.5
CDS-3UTR GCA 90 bp GCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTACAAATGGCACCACCTGCGGCTaGTGGGGAAGGCGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: AIWFKRQFLLEPDISVTNGTTCG*WGRRLA
Trigger: CGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCC...ATTTGTAACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCCCTGCCAGCTTCGCTaGCCCTCATGGAGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPPCQLR*PSWRVA
Trigger: TGCAACCCTCCATGAGGGGCAGCGAAGCTGGCAGGG...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp ATCCATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTAGAGGCACTGGGGGCTaGGGCCGGGTGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: IHAIWFKRQFLLEPDISVRGTGG*GRVGRC
Trigger: GCATCTGCCCACCCGGCCGCAGCCCCCAGTGCCTCT...AACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp CAGAAGTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCAAACTGCATTTAACCTaGGCCAGAGAGTTCACCGTA +
Preference number: 4 (lower is better)
Translates to: QKYHLGAALAILGQGHTSKLHLT*AREFTV
Trigger: TACGGTGAACTCTCTGGCGCAGGTTAAATGCAGTTT...GCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTACTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTTGCAGAGTGCCAGGCTaGTCAAGGAGACCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPCRVPG*SRRPRG
Trigger: GCCCCTCGGTCTCCTTGAGCAGCCTGGCACTCTGCA...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CCA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCACCGAAGGTTTCCCATaGACGGATTCTCCCACACTG +
Preference number: 4 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRTEGFP*TDSPTL
Trigger: CAGTGTGGGAGAATCCGTCCATGGGAAACCTTCGGT...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000488353.2
ENST00000605895.6
CDS-3UTR CCA 90 bp GGCAGATGCCGCCGTGGCTCCATCCATCAGCACCCAGTCCTTTGCTTCACTGTGGAAATCCATGCGATTTaGTTTAAGCGCCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: GRCRRGSIHQHPVLCFTVEIHAI*FKRQFL
Trigger: AAGAAACTGGCGCTTAAACCAAATCGCATGGATTTC...CACAGTGAAGCAAAGGACTGGGTGCTGATGGATGGAGCCACGGCGGCATCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp CATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTACATCCTGCCTGCCCACCTaGCACAGCGGGGACCGGCCA +
Preference number: 4 (lower is better)
Translates to: HAIWFKRQFLLEPDISVTSCLPT*HSGDRP
Trigger: TGGCCGGTCCCCGCTGTGCCAGGTGGGCAGGCAGGA...TGTAACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTATCCCTCGGGCTCTGTaGAGTGGCTGGCACCACCTG +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPIPRAL*SGWHHL
Trigger: CAGGTGGTGCCAGCCACTCCACAGAGCCCGAGGGAT...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGGAGCAGCCTTGCTaGCCATGGGGTCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPQEQPC*PWGPLA
Trigger: AGCCAGTGGACCCCATGGCCAGCAAGGCTGCTCCTG...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR TCA 90 bp ATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCTGTTCTTGCAACACGTaGGGCAGCCTCAGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: IVNNGSKLFLQHVRQPQSCSCNT*GSLSPA
Trigger: AGCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACA...GGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000488353.2
ENST00000605895.6
CDS-3UTR TCA 90 bp GAACCTACAAAGCCAGTCTGCTCCCTGCCAGCTTCGCTGCCCCTCATGGAGGGTTTTAAACATCTCCAGTaGGATGGAATTAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: EPTKPVCSLPASLPLMEGFKHLQ*DGIRKL
Trigger: CAGTTTCCTAATTCCATCTCACTGGAGATGTTTAAA...ACCCTCCATGAGGGGCAGCGAAGCTGGCAGGGAGCAGACTGGCTTTGTAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp GGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGGTCCCATCCTCACTGTaGGCACTGGGGAAATCTTCC +
Preference number: 4 (lower is better)
Translates to: GIVNNGSKLFLQHVRQPQVPSSL*ALGKSS
Trigger: GGAAGATTTCCCCAGTGCTCACAGTGAGGATGGGAC...CTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR TCA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCGAACCTGCACCTTCCTaGAACCAACGCTTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSREPAPS*NQRFSS
Trigger: ACTGGAAAAGCGTTGGTTTCAGGAAGGTGCAGGTTC...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR TCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCCCTCGGCAGGGCAGTaGGGAGAAACAGACTCTGGT +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPPSAGQ*GETDSG
Trigger: ACCAGAGTCTGTTTCTCCTCACTGCCCTGCCGAGGG...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR GCA 90 bp TTTCTCGAATCAAAAACGCTGACATGCAAGTGGGTTCCGCCTCTCCCGCAGTGGCCCTTGGTAGCCGCATaGCAAAATTTAAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: FLESKTLTCKWVPPLPQWPLVAA*QNLNSG
Trigger: CCCAGAGTTTAAATTTTGGCATGCGGCTACCAAGGG...CCACTGCGGGAGAGGCGGAACCCACTTGCATGTCAGCGTTTTTGATTCGAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp GGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTGCCGGCATCCTCCTTaGCTCTGTACCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GIVNNGSKLFLQHVRQPQCRHPP*LCTFSS
Trigger: GGAAGAGAAGGTACAGAGGCAAGGAGGATGCCGGCA...CTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000488353.2
ENST00000605895.6
CDS-3UTR GCA 90 bp GAAATCCATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCACTCCCTCGCAGGCCTTaGTCCTGCCTGCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: EIHAIWFKRQFLLEPDISLPRRP*SCLPTW
Trigger: CCAGGTGGGCAGGCAGGAGCAAGGCCTGCGAGGGAG...TGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATGGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp CATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTACACCGGCTCCGGGAAGCTaGAGCGAGCACTTCCGCTCC +
Preference number: 4 (lower is better)
Translates to: HAIWFKRQFLLEPDISVTPAPGS*SEHFRS
Trigger: GGAGCGGAAGTGCTCGCTGCAGCTTCCCGGAGCCGG...TGTAACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378513.7
CDS-3UTR GCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTACGTGTCCAAGGTCCTaGCACAGCCCTGCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPTCPRS*HSPASG
Trigger: CCCAGAAGCAGGGCTGTGGCAGGACCTTGGACACGT...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTAGTCCCGCTTCTAGCTaGCGAAGGCCTTGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPSPASS*RRPCRH
Trigger: ATGCCGGCAAGGCCTTCGCCAGCTAGAAGCGGGACT...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000488353.2
ENST00000605895.6
CDS-3UTR CCA 90 bp TGTCAGTGTCTCATCTGGGACCACAGCTGTGATGTTCTGCTGTGCAATATGGGTAGGCCAAACAAAAGGTaGGCTTTCCTGTGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: CQCLIWDHSCDVLLCNMGRPNKR*AFLCPA
Trigger: CGCTGGACACAGGAAAGCCCACCTTTTGTTTGGCCT...ACCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACACTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCTTGAATTCTGCTGTGCAATATaGGTCACCTTTCGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: VPPGSSTGYLGSGTHKLEFCCAI*VTFRKG
Trigger: GCCTTTTCGAAAGGTGACCCATATTGCACAGCAGAA...TTCAAGCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp CCCAAGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAGCAGCACTGGCTATTTCTGCTGTGCAATATaGGTCACCTTTCGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: PKCLNTVPEVPPGSSTGYFCCAI*VTFRKG
Trigger: GCCTTTTCGAAAGGTGACCCATATTGCACAGCAGAA...ATAGCCAGTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCTTTTCATTCCCACACTaGCACCTCAGTCACCTGCGT +
Preference number: 4 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRFSFPH*HLSHLR
Trigger: ACGCAGGTGACTGAGGTGCCAGTGTGGGAATGAAAA...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR TCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCTGGGAGCCTTCGAATaGAGGGGCGGAATTCCTCGT +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPLGAFE*RGGIPR
Trigger: ACGAGGAATTCCGCCCCTTCATTCGAAGGCTCCCAG...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000488353.2
ENST00000605895.6
CDS-3UTR TCA 90 bp TGTCTCATCTGGGACCACAGCTGTGATGTTCTGCTGTGCAATATGGGTCACCTTCTGGGACCACAGCTGTaGTGTTCTGCTGTGCAATAT +
Preference number: 4 (lower is better)
Translates to: CLIWDHSCDVLLCNMGHLLGPQL*CSAVQY
Trigger: ATATTGCACAGCAGAACATCACAGCTGTGGTCCCAG...AAGGTGACCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp GGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGAGGGACACACAAGCTTaGACGTGGCCTCTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: GIVNNGSKLFLQHVRQPQRDTQA*TWPLRG
Trigger: TCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCT...CTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp CCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGGTTTTTTTCCCGCCTCCATTTaGTGTTTCCAGGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: PSARPQPISRLHLMFPGFFPASI*CFQVFK
Trigger: TTTGAAAACCTGGAAACATCAAATGGAGGCGGGAAA...AAAACCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGG
50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp ATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCAGAATGTGGCTCCATaGCACCGTTCCTGGATCCTC +
Preference number: 4 (lower is better)
Translates to: IVNNGSKLFLQHVRQPQSQNVAP*HRSWIL
Trigger: GAGGATCCAGGAACGGTGTCATGGAGCCACATTCTG...GGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR TCA 90 bp ATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCATGAGGAATTCACCTaGGAACCCAGGTGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: IVNNGSKLFLQHVRQPQSHEEFT*EPRCQR
Trigger: CCTCTGGCACCTGGGTTCTCAGGTGAATTCCTCATG...GGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR GCA 90 bp CAGAAGTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCATCATGTGCTTGATTTaGCTCTTCATCGTGATACAG +
Preference number: 4 (lower is better)
Translates to: QKYHLGAALAILGQGHTSIMCLI*LFIVIQ
Trigger: CTGTATCACGATGAAGAGGCAAATCAAGCACATGAT...GCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTACTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp TTCCCATGTGTGAACGGGATGTACCGGTACTTAATCATGTGCTTGATTTGCCTCTGCCGGCATCCTCCTTaGCTCTGTACCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FPCVNGMYRYLIMCLICLCRHPP*LCTFSS
Trigger: GGAAGAGAAGGTACAGAGGCAAGGAGGATGCCGGCA...GAGGCAAATCAAGCACATGATTAAGTACCGGTACATCCCGTTCACACATGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378512.5
ENST00000378513.7
CDS-3UTR GCA 90 bp GGCTTCCGGCAAAGACCCGCGCAAACCATGTCTTGCTGTTTGACTTACTTAGGACCTGTGTCCAGCGACTaGCATGTTTTAGGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: GFRQRPAQTMSCCLTYLGPVSSD*HVLGKD
Trigger: GTCTTTACCTAAAACATGGCAGTCGCTGGACACAGG...TCCTAAGTAAGTCAAACAGCAAGACATGGTTTGCGCGGGTCTTTGCCGGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp CCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGGTTTTGCGCAAACCATGTCTTaGTGTTTGACTTACTTAGGA +
Preference number: 4 (lower is better)
Translates to: PSARPQPISRLHLMFPGFAQTMS*CLTYLG
Trigger: TCCTAAGTAAGTCAAACAGCAAGACATGGTTTGCGC...AAAACCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp ATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCAATCCCGCCCTCAAGTaGCTTGGCTCTCCCATCACA +
Preference number: 4 (lower is better)
Translates to: IVNNGSKLFLQHVRQPQSNPALK*LGSPIT
Trigger: TGTGATGGGAGAGCCAAGGCACTTGAGGGCGGGATT...GGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR GCA 90 bp ATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCGCAGGAGCCAGAACCTaGACCTTCCTGAAACCAACG +
Preference number: 4 (lower is better)
Translates to: IVNNGSKLFLQHVRQPQSAGART*TFLKPT
Trigger: CGTTGGTTTCAGGAAGGTGCAGGTTCTGGCTCCTGC...GGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR GCA 90 bp GGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCAGTACCCAGGGCCTaGCGGTTGTCATTCCTACTT +
Preference number: 4 (lower is better)
Translates to: GIVNNGSKLFLQHVRQPQSVPRA*RLSFLL
Trigger: AAGTAGGAATGACAACCGGCAGGCCCTGGGTACTGA...CTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR GCA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCGGTAGTCCATCCATCTaGGTCCCAGTTTCTTATCTG +
Preference number: 4 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRGSPSI*VPVSYL
Trigger: CAGATAAGAAACTGGGACGCAGATGGATGGACTACC...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CCA 90 bp ATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCAGCCGTGTAGGGTGTaGACTTGTCTAGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: IVNNGSKLFLQHVRQPQSQPCRV*TCLART
Trigger: AGTCCTGGCTAGACAAGTCCACACCCTACACGGCTG...GGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000488353.2
ENST00000605895.6
CDS-3UTR CCA 90 bp GAAGTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCTTCCAAAATTTAAACTCTaGGAGCCTTCGAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: EVPPGSSTGYLGSGTHKLPKFKL*EPSNEG
Trigger: CCCTTCATTCGAAGGCTCCCAGAGTTTAAATTTTGG...AAGCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp AATTCCATCCGTGAGAAACACTTGAACGTCACTGAAAAAGAAATCCATGCGATTTCGGGCTCTGTGGAGTaGCTGGCACCACCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: NSIREKHLNVTEKEIHAISGSVE*LAPPAA
Trigger: AGCCGCAGGTGGTGCCAGCCACTCCACAGAGCCCGA...AATCGCATGGATTTCTTTTTCAGTGACGTTCAAGTGTTTCTCACGGATGGAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp TGGCCTCTTAGAGGAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCACGCTGACATGCAAGTaGGTTCCGCCTCTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: WPLRGARCQICKHWYKKITLTCK*VPPLPQ
Trigger: CTGCGGGAGAGGCGGAACCCACTTGCATGTCAGCGT...GATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp AGTGTCTCAACACGGTACCAGAAGTACCACCTGGGAGCAGCACTGGCTATCTTGATGACCCTGTATTCCTaGGTTAGTCAAGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SVSTRYQKYHLGAALAILMTLYS*VSQGQL
Trigger: AAGCTGACCTTGACTAACCCAGGAATACAGGGTCAT...CAAGATAGCCAGTGCTGCTCCCAGGTGGTACTTCTGGTACCGTGTTGAGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCCTCTGGTCTCAAGTTTaGCTTAAAGTCCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRLWSQV*LKVPPV
Trigger: CACAGGTGGGACTTTAAGCCAAACTTGAGACCAGAG...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CCA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCACGGGTGTGAAATCCTaGCCCTATTTTCACCAACAC +
Preference number: 4 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRTGVKS*PYFHQH
Trigger: GTGTTGGTGAAAATAGGGCCAGGATTTCACACCCGT...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR TCA 90 bp CAGAAGTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCCACTTGGTAAAACGTTaGGAGTATTTCTTTTCTCGA +
Preference number: 4 (lower is better)
Translates to: QKYHLGAALAILGQGHTSHLVKR*EYFFSR
Trigger: TCGAGAAAAGAAATACTCTCAACGTTTTACCAAGTG...GCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTACTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp TTCCCATGTGTGAACGGGATGTACCGGTACTTAATCATGTGCTTGATTTGCCTCTCACCGTGTCAATTCTaGGACAGGAAACACCGCCCA +
Preference number: 4 (lower is better)
Translates to: FPCVNGMYRYLIMCLICLSPCQF*DRKHRP
Trigger: TGGGCGGTGTTTCCTGTCTCAGAATTGACACGGTGA...GAGGCAAATCAAGCACATGATTAAGTACCGGTACATCCCGTTCACACATGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378513.7
CDS-3UTR TCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTTCACAACTGATGCGCTaGAGTGATCCAGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPSQLMR*SDPGSS
Trigger: GGAGCTGCCTGGATCACTTCAGCGCATCAGTTGTGA...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR GCA 90 bp GAGTATTTCTTTTCTCGAATCAAAAACGCTGACATGCAAGTGGGTTCCGCCTCTTGCCGGCATCCTCCTTaGCTCTGTACCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: EYFFSRIKNADMQVGSASCRHPP*LCTFSS
Trigger: GGAAGAGAAGGTACAGAGGCAAGGAGGATGCCGGCA...AGAGGCGGAACCCACTTGCATGTCAGCGTTTTTGATTCGAGAAAAGAAATACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp TGTCTCATCTGGGACCACAGCTGTGATGTTCTGCTGTGCAATATGGGTCACCTTACAGCTGTGATGTTCTaGTGTGCAATATGGGTCACC +
Preference number: 4 (lower is better)
Translates to: CLIWDHSCDVLLCNMGHLTAVMF*CAIWVT
Trigger: GGTGACCCATATTGCACAGCAGAACATCACAGCTGT...AAGGTGACCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTATCCTCTGTGCAGAGTaGCAGGCTGCTCAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPILCAE*QAAQGD
Trigger: GTCTCCTTGAGCAGCCTGGCACTCTGCACAGAGGAT...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CCA 90 bp GAGTATTTCTTTTCTCGAATCAAAAACGCTGACATGCAAGTGGGTTCCGCCTCTCAGCCGTGTAGGGTGTaGACTTGTCTAGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: EYFFSRIKNADMQVGSASQPCRV*TCLART
Trigger: AGTCCTGGCTAGACAAGTCCACACCCTACACGGCTG...AGAGGCGGAACCCACTTGCATGTCAGCGTTTTTGATTCGAGAAAAGAAATACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GCGTGCGACTTCCTGTCACACCTTAGGCCTGAGCGCTTATTAAGAAAACAGTATATTCCTCGTTCTGTTTaGTGGGTAGCGAAGGACCGT +
Preference number: 4 (lower is better)
Translates to: ACDFLSHLRPERLLRKQYIPRSV*WVAKDR
Trigger: ACGGTCCTTCGCTACCCACCAAACAGAACGAGGAAT...ATACTGTTTTCTTAATAAGCGCTCAGGCCTAAGGTGTGACAGGAAGTCGCACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp TACTTGACAATCACCTTTAAAACGTTAAGTTCTTTCGGACACGCAGGAATCAGGAGTCCCGCTTCTAGCTaGCGAAGGCCTTGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: YLTITFKTLSSFGHAGIRSPASS*RRPCRH
Trigger: ATGCCGGCAAGGCCTTCGCCAGCTAGAAGCGGGACT...CCTGATTCCTGCGTGTCCGAAAGAACTTAACGTTTTAAAGGTGATTGTCAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp TTTCTCGAATCAAAAACGCTGACATGCAAGTGGGTTCCGCCTCTCCCGCAGTGGTCCGTGAGAAACACTTaGACGTCACTGAAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: FLESKTLTCKWVPPLPQWSVRNT*TSLKKK
Trigger: TTTCTTTTTCAGTGACGTTCAAGTGTTTCTCACGGA...CCACTGCGGGAGAGGCGGAACCCACTTGCATGTCAGCGTTTTTGATTCGAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCTCTCCCATCACAACTaGTGCGCTGAAGTGATCCAG +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPLSHHN*CAEVIQ
Trigger: CTGGATCACTTCAGCGCATCAGTTGTGATGGGAGAG...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR GCA 90 bp GCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTACAAATAGCCAGTCTGCTCCCTaGCAGCTTCGCTGCCCCTCA +
Preference number: 4 (lower is better)
Translates to: AIWFKRQFLLEPDISVTNSQSAP*QLRCPS
Trigger: TGAGGGGCAGCGAAGCTGGCAGGGAGCAGACTGGCT...ATTTGTAACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp CTTAGAGGAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACTCTGGCCAAGCGCGTaGGACTTCCTGTCACACCTT +
Preference number: 4 (lower is better)
Translates to: LRGARCQICKHWYKKIQTLWPSA*DFLSHL
Trigger: AAGGTGTGACAGGAAGTCGCACGCGCTTGGCCAGAG...TGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp GAAATCCATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCATGCCTCGAGGGCGTGTaGCACATTTCCCTGCTGACG +
Preference number: 4 (lower is better)
Translates to: EIHAIWFKRQFLLEPDISCLEGV*HISLLT
Trigger: CGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCA...TGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATGGATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTACCGAAGGTTTCCCATaGACGGATTCTCCCACACTG +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPTEGFP*TDSPTL
Trigger: CAGTGTGGGAGAATCCGTCCATGGGAAACCTTCGGT...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000488353.2
ENST00000605895.6
CDS-3UTR CCA 90 bp TGGCACACACACCTTCAATACACGTCAAGGTCGCTTCCAGTTTTAGAAAACAGACCTCGTTCTGTTTGGTaGGTAGCGAAGGACCGTCAT +
Preference number: 4 (lower is better)
Translates to: WHTHLQYTSRSLPVLENRPRSVW*VAKDRH
Trigger: ATGACGGTCCTTCGCTACCCACCAAACAGAACGAGG...TCTGTTTTCTAAAACTGGAAGCGACCTTGACGTGTATTGAAGGTGTGTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCCTCGTTCTGTTTGGTaGGTAGCGAAGGACCGTCAT +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPPRSVW*VAKDRH
Trigger: ATGACGGTCCTTCGCTACCCACCAAACAGAACGAGG...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000488353.2
ENST00000605895.6
CDS-3UTR CCA 90 bp ATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCATTCCTCGTTCTGTTTaGTGGGTAGCGAAGGACCGT +
Preference number: 4 (lower is better)
Translates to: IVNNGSKLFLQHVRQPQSIPRSV*WVAKDR
Trigger: ACGGTCCTTCGCTACCCACCAAACAGAACGAGGAAT...GGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000488353.2
ENST00000605895.6
CDS-3UTR CCA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCCCAAAATTTAAACTCTaGGAGCCTTCGAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRPKFKL*EPSNEG
Trigger: CCCTTCATTCGAAGGCTCCCAGAGTTTAAATTTTGG...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000488353.2
ENST00000605895.6
CDS-3UTR CCA 90 bp CAGAAGTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCCAGATATGTAAACACTaGTACAAGAAAATCCAGACA +
Preference number: 4 (lower is better)
Translates to: QKYHLGAALAILGQGHTSQICKH*YKKIQT
Trigger: TGTCTGGATTTTCTTGTACCAGTGTTTACATATCTG...GCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTACTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCCTCACTGTGAGCACTaGGGAAATCTTCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPPHCEH*GNLPFR
Trigger: CCTGAAGGGAAGATTTCCCCAGTGCTCACAGTGAGG...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR TCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTTTCTCTTCCCATGTGTaGACGGGATGTACCGGTACT +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPFSSHV*TGCTGT
Trigger: AGTACCGGTACATCCCGTTCACACATGGGAAGAGAA...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000488353.2
ENST00000605895.6
CDS-3UTR TCA 90 bp CATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTACATGTTCTTGCAACACGTaGGGCAGCCTCAGTCCCGCT +
Preference number: 4 (lower is better)
Translates to: HAIWFKRQFLLEPDISVTCSCNT*GSLSPA
Trigger: AGCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACA...TGTAACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp GAGTATTTCTTTTCTCGAATCAAAAACGCTGACATGCAAGTGGGTTCCGCCTCTCTCCTGTCCACAGTCTaGGAATCCCAAGTGTCTCAA +
Preference number: 4 (lower is better)
Translates to: EYFFSRIKNADMQVGSASLLSTV*ESQVSQ
Trigger: TTGAGACACTTGGGATTCTCAGACTGTGGACAGGAG...AGAGGCGGAACCCACTTGCATGTCAGCGTTTTTGATTCGAGAAAAGAAATACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp TGTCAGTGTCTCATCTGGGACCACAGCTGTGATGTTCTGCTGTGCAATATGGGTGAACTTGAGATTTCCTaGAGCGCAGTGTTAAAATGC +
Preference number: 4 (lower is better)
Translates to: CQCLIWDHSCDVLLCNMGELEIS*SAVLKC
Trigger: GCATTTTAACACTGCGCTTCAGGAAATCTCAAGTTC...ACCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACACTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp GAAATCCATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAAGAGAGGTCTCTTCCTaGCCCAGACGCACTCACGAG +
Preference number: 4 (lower is better)
Translates to: EIHAIWFKRQFLLEPDISREVSS*PRRTHE
Trigger: CTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCTCT...TGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATGGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp TACTTGACAATCACCTTTAAAACGTTAAGTTCTTTCGGACACGCAGGAATCAGGTGCCGGCATCCTCCTTaGCTCTGTACCTTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: YLTITFKTLSSFGHAGIRCRHPP*LCTFSS
Trigger: GGAAGAGAAGGTACAGAGGCAAGGAGGATGCCGGCA...CCTGATTCCTGCGTGTCCGAAAGAACTTAACGTTTTAAAGGTGATTGTCAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp GCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTACAAATTGCCTCGAGGGCGTGTaGCACATTTCCCTGCTGACG +
Preference number: 4 (lower is better)
Translates to: AIWFKRQFLLEPDISVTNCLEGV*HISLLT
Trigger: CGTCAGCAGGGAAATGTGGCACACGCCCTCGAGGCA...ATTTGTAACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp TACTTGACAATCACCTTTAAAACGTTAAGTTCTTTCGGACACGCAGGAATCAGGAGCGCAGTGTTAAAATaGCTCGAGGGCGTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: YLTITFKTLSSFGHAGIRSAVLK*LEGVCH
Trigger: GTGGCACACGCCCTCGAGGCATTTTAACACTGCGCT...CCTGATTCCTGCGTGTCCGAAAGAACTTAACGTTTTAAAGGTGATTGTCAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp CTTCTCTTCCCATGTGTGAACGGGATGTACCGGTACTTAATCATGTGCTTGATTATTCCTCGTTCTGTTTaGTGGGTAGCGAAGGACCGT +
Preference number: 4 (lower is better)
Translates to: LLFPCVNGMYRYLIMCLIIPRSV*WVAKDR
Trigger: ACGGTCCTTCGCTACCCACCAAACAGAACGAGGAAT...AATCAAGCACATGATTAAGTACCGGTACATCCCGTTCACACATGGGAAGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378512.5
ENST00000378513.7
CDS-3UTR CCA 90 bp ATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCATGTGTCACCTGGAATaGCCACCCTATTTAGGCCAA +
Preference number: 4 (lower is better)
Translates to: IVNNGSKLFLQHVRQPQSMCHLE*PPYLGQ
Trigger: TTGGCCTAAATAGGGTGGCCATTCCAGGTGACACAT...GGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCCAAGTCTCAAACAGTaGAAGCCACGTGTCCAAGGT +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPPSLKQ*KPRVQG
Trigger: ACCTTGGACACGTGGCTTCCACTGTTTGAGACTTGG...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR TCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTAAGCATTCACGGGTGTaGAATCCTGGCCCTATTTTC +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPKHSRV*NPGPIF
Trigger: GAAAATAGGGCCAGGATTTCACACCCGTGAATGCTT...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR GCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCCCTTGGTAGCCGCATaGCAAAATTTAAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPPLVAA*QNLNSG
Trigger: CCCAGAGTTTAAATTTTGGCATGCGGCTACCAAGGG...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378513.7
ENST00000488353.2
ENST00000605895.6
CDS-3UTR GCA 90 bp CATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTACACCCTTGGTAGCCGCATaGCTTCAAGTGGGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: HAIWFKRQFLLEPDISVTPLVAA*LQVGRE
Trigger: TTCTCTCCCCACTTGAAGGCATGCGGCTACCAAGGG...TGTAACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378512.5
CDS-3UTR GCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAAAGACTAAAGAGTTaGCCTGGCCCATCAGCATGT +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPQRLKS*PGPSAC
Trigger: ACATGCTGATGGGCCAGGGCAACTCTTTAGTCTTTG...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR GCA 90 bp GGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGCTCCTATTTCAACACTaGTGTGATGCCATGAGGAAT +
Preference number: 4 (lower is better)
Translates to: GIVNNGSKLFLQHVRQPQLLFQH*CDAMRN
Trigger: ATTCCTCATGGCATCACAGCAGTGTTGAAATAGGAG...CTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CCA 90 bp GAGTATTTCTTTTCTCGAATCAAAAACGCTGACATGCAAGTGGGTTCCGCCTCTTGTCAGTGTCTCATCTaGGACCACAGCTGTGATGTT +
Preference number: 4 (lower is better)
Translates to: EYFFSRIKNADMQVGSASCQCLI*DHSCDV
Trigger: AACATCACAGCTGTGGTCCCAGATGAGACACTGACA...AGAGGCGGAACCCACTTGCATGTCAGCGTTTTTGATTCGAGAAAAGAAATACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp TACTTGACAATCACCTTTAAAACGTTAAGTTCTTTCGGACACGCAGGAATCAGGTTCTCTTCCCATGTGTaGACGGGATGTACCGGTACT +
Preference number: 4 (lower is better)
Translates to: YLTITFKTLSSFGHAGIRFSSHV*TGCTGT
Trigger: AGTACCGGTACATCCCGTTCACACATGGGAAGAGAA...CCTGATTCCTGCGTGTCCGAAAGAACTTAACGTTTTAAAGGTGATTGTCAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp ATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCCCCACACAGTTACTTaGCAATCACCTTTAAAACGT +
Preference number: 4 (lower is better)
Translates to: IVNNGSKLFLQHVRQPQSPHTVT*QSPLKR
Trigger: ACGTTTTAAAGGTGATTGTCAAGTAACTGTGTGGGG...GGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp TGTCAGTGTCTCATCTGGGACCACAGCTGTGATGTTCTGCTGTGCAATATGGGTTTTAAACATCTCCAGTaGGATGGAATTAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: CQCLIWDHSCDVLLCNMGFKHLQ*DGIRKL
Trigger: CAGTTTCCTAATTCCATCTCACTGGAGATGTTTAAA...ACCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACACTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp GCGTGCGACTTCCTGTCACACCTTAGGCCTGAGCGCTTATTAAGAAAACAGTATTTAAGAACCAAGTTTTaGGTCATTAGGATAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ACDFLSHLRPERLLRKQYLRTKF*VIRIEA
Trigger: GGCCTCTATCCTAATGACTCAAAACTTGGTTCTTAA...ATACTGTTTTCTTAATAAGCGCTCAGGCCTAAGGTGTGACAGGAAGTCGCACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp AGTTACTTGACAATCACCTTTAAAACGTTAAGTTCTTTCGGACACGCAGGAATCTCACCGTGTCAATTCTaGGACAGGAAACACCGCCCA +
Preference number: 4 (lower is better)
Translates to: SYLTITFKTLSSFGHAGISPCQF*DRKHRP
Trigger: TGGGCGGTGTTTCCTGTCTCAGAATTGACACGGTGA...GATTCCTGCGTGTCCGAAAGAACTTAACGTTTTAAAGGTGATTGTCAAGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp AATTCCATCCGTGAGAAACACTTGAACGTCACTGAAAAAGAAATCCATGCGATTGTTAAGGCAATGGACTaGATGAGTGCGTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: NSIREKHLNVTEKEIHAIVKAMD*MSACWV
Trigger: CACCCAGCACGCACTCATTCAGTCCATTGCCTTAAC...AATCGCATGGATTTCTTTTTCAGTGACGTTCAAGTGTTTCTCACGGATGGAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp TTGCCTCTGTACCTTCTCTTCCCATGTGTGAACGGGATGTACCGGTACTTAATCTATTCGTTTATATTGTaGGAAAACAGCCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: LPLYLLFPCVNGMYRYLIYSFIL*ENSPIR
Trigger: CCTGATGGGGCTGTTTTCTCACAATATAAACGAATA...GATTAAGTACCGGTACATCCCGTTCACACATGGGAAGAGAAGGTACAGAGGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378513.7
CDS-3UTR TCA 90 bp GGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCTCATCTGTAAAATaGGGCTCTAAGAAATACCAG +
Preference number: 4 (lower is better)
Translates to: GIVNNGSKLFLQHVRQPQSSSVK*GSKKYQ
Trigger: CTGGTATTTCTTAGAGCCTCATTTTACAGATGAGGA...CTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR TCA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTAGGTCCTCCACCCCATaGACAGGAAAATGTTATCTA +
Preference number: 4 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPRSSTP*TGKCYL
Trigger: TAGATAACATTTTCCTGTTCATGGGGTGGAGGACCT...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR GCA 90 bp TACTTGACAATCACCTTTAAAACGTTAAGTTCTTTCGGACACGCAGGAATCAGGTCAAAAACGCTGACATaGAAGTGGGTTCCGCCTCTC +
Preference number: 4 (lower is better)
Translates to: YLTITFKTLSSFGHAGIRSKTLT*KWVPPL
Trigger: GAGAGGCGGAACCCACTTGCATGTCAGCGTTTTTGA...CCTGATTCCTGCGTGTCCGAAAGAACTTAACGTTTTAAAGGTGATTGTCAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp TGGCCTCTTAGAGGAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCCTGTGTCCAGCGACTaGCATGTTTTAGGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: WPLRGARCQICKHWYKKIPVSSD*HVLGKD
Trigger: GTCTTTACCTAAAACATGGCAGTCGCTGGACACAGG...GATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAGAGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp AGTATGAAAAATGACAAACACTCCTGTCCACAGTCTGAGAATCCCAAGTGTCTCACAGCTGTGATGTTCTaGTGTGCAATATGGGTCACC +
Preference number: 4 (lower is better)
Translates to: SMKNDKHSCPQSENPKCLTAVMF*CAIWVT
Trigger: GGTGACCCATATTGCACAGCAGAACATCACAGCTGT...GAGACACTTGGGATTCTCAGACTGTGGACAGGAGTGTTTGTCATTTTTCATACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp ATCCATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTAGAACACCGGGACGTTaGAAGCGTCGAAGAAAGTAC +
Preference number: 4 (lower is better)
Translates to: IHAIWFKRQFLLEPDISVRTPGR*KRRRKY
Trigger: GTACTTTCTTCGACGCTTTCAACGTCCCGGTGTTCT...AACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp GAAATCCATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCACTCCTGTCCACAGTCTaGGAATCCCAAGTGTCTCAA +
Preference number: 4 (lower is better)
Translates to: EIHAIWFKRQFLLEPDISLLSTV*ESQVSQ
Trigger: TTGAGACACTTGGGATTCTCAGACTGTGGACAGGAG...TGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATGGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp GCGTGCGACTTCCTGTCACACCTTAGGCCTGAGCGCTTATTAAGAAAACAGTATAAACAGTATGAAAAATaGCAAACACTCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: ACDFLSHLRPERLLRKQYKQYEK*QTLLST
Trigger: TGTGGACAGGAGTGTTTGTCATTTTTCATACTGTTT...ATACTGTTTTCTTAATAAGCGCTCAGGCCTAAGGTGTGACAGGAAGTCGCACGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp CAAACCATGTCTTGCTGTTTGACTTACTTAGGAATGAGGATGACCCTGTATTCCTGTGATGTTCTGCTGTaGAATATGGGTCACCTTTCG +
Preference number: 4 (lower is better)
Translates to: QTMSCCLTYLGMRMTLYSCDVLL*NMGHLS
Trigger: CGAAAGGTGACCCATATTGCACAGCAGAACATCACA...GGAATACAGGGTCATCCTCATTCCTAAGTAAGTCAAACAGCAAGACATGGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp AGTATGAAAAATGACAAACACTCCTGTCCACAGTCTGAGAATCCCAAGTGTCTCCCCCACACAGTTACTTaGCAATCACCTTTAAAACGT +
Preference number: 4 (lower is better)
Translates to: SMKNDKHSCPQSENPKCLPHTVT*QSPLKR
Trigger: ACGTTTTAAAGGTGATTGTCAAGTAACTGTGTGGGG...GAGACACTTGGGATTCTCAGACTGTGGACAGGAGTGTTTGTCATTTTTCATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp CTTAGAGGAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACCCCTCATGGAGGGTTaGATGAGGACAGATTTAAAT +
Preference number: 4 (lower is better)
Translates to: LRGARCQICKHWYKKIQTPLMEG*MRTDLN
Trigger: ATTTAAATCTGTCCTCATGCAACCCTCCATGAGGGG...TGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp CTTCTCTTCCCATGTGTGAACGGGATGTACCGGTACTTAATCATGTGCTTGATTGAAATCCATGCGATTTaGTTTAAGCGCCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LLFPCVNGMYRYLIMCLIEIHAI*FKRQFL
Trigger: AAGAAACTGGCGCTTAAACCAAATCGCATGGATTTC...AATCAAGCACATGATTAAGTACCGGTACATCCCGTTCACACATGGGAAGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378512.5
ENST00000378513.7
CDS-3UTR TCA 90 bp AATTCCATCCGTGAGAAACACTTGAACGTCACTGAAAAAGAAATCCATGCGATTCTAGAATTCCATCCGTaGGAAACACTTGAACGTCAC +
Preference number: 4 (lower is better)
Translates to: NSIREKHLNVTEKEIHAILEFHP*ETLERH
Trigger: GTGACGTTCAAGTGTTTCTCACGGATGGAATTCTAG...AATCGCATGGATTTCTTTTTCAGTGACGTTCAAGTGTTTCTCACGGATGGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp ATCCATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTCTAGAATTCCATCCGTaGGAAACACTTGAACGTCAC +
Preference number: 4 (lower is better)
Translates to: IHAIWFKRQFLLEPDISVLEFHP*ETLERH
Trigger: GTGACGTTCAAGTGTTTCTCACGGATGGAATTCTAG...AACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp CATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTACACTAGAATTCCATCCGTaGGAAACACTTGAACGTCAC +
Preference number: 4 (lower is better)
Translates to: HAIWFKRQFLLEPDISVTLEFHP*ETLERH
Trigger: GTGACGTTCAAGTGTTTCTCACGGATGGAATTCTAG...TGTAACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp CTTAGAGGAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACAGAACTTGAGATTTCCTaGAGCGCAGTGTTAAAATGC +
Preference number: 4 (lower is better)
Translates to: LRGARCQICKHWYKKIQTELEIS*SAVLKC
Trigger: GCATTTTAACACTGCGCTTCAGGAAATCTCAAGTTC...TGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp AATTCCATCCGTGAGAAACACTTGAACGTCACTGAAAAAGAAATCCATGCGATTATGACCCTGTATTCCTaGGTTAGTCAAGGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: NSIREKHLNVTEKEIHAIMTLYS*VSQGQL
Trigger: AAGCTGACCTTGACTAACCCAGGAATACAGGGTCAT...AATCGCATGGATTTCTTTTTCAGTGACGTTCAAGTGTTTCTCACGGATGGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp AATTCCATCCGTGAGAAACACTTGAACGTCACTGAAAAAGAAATCCATGCGATTTCCGTGAGAAACACTTaGACGTCACTGAAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: NSIREKHLNVTEKEIHAISVRNT*TSLKKK
Trigger: TTTCTTTTTCAGTGACGTTCAAGTGTTTCTCACGGA...AATCGCATGGATTTCTTTTTCAGTGACGTTCAAGTGTTTCTCACGGATGGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp AATTCCATCCGTGAGAAACACTTGAACGTCACTGAAAAAGAAATCCATGCGATTTATTCGTTTATATTGTaGGAAAACAGCCCCATCAGG +
Preference number: 4 (lower is better)
Translates to: NSIREKHLNVTEKEIHAIYSFIL*ENSPIR
Trigger: CCTGATGGGGCTGTTTTCTCACAATATAAACGAATA...AATCGCATGGATTTCTTTTTCAGTGACGTTCAAGTGTTTCTCACGGATGGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR GCA 90 bp GAAATCCATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAATCATGTGCTTGATTTaGCTCTTCATCGTGATACAG +
Preference number: 4 (lower is better)
Translates to: EIHAIWFKRQFLLEPDISIMCLI*LFIVIQ
Trigger: CTGTATCACGATGAAGAGGCAAATCAAGCACATGAT...TGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATGGATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp GCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTACAAATCCAAAATTTAAACTCTaGGAGCCTTCGAATGAAGGG +
Preference number: 4 (lower is better)
Translates to: AIWFKRQFLLEPDISVTNPKFKL*EPSNEG
Trigger: CCCTTCATTCGAAGGCTCCCAGAGTTTAAATTTTGG...ATTTGTAACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp AGTTACTTGACAATCACCTTTAAAACGTTAAGTTCTTTCGGACACGCAGGAATCTTTAAACATCTCCAGTaGGATGGAATTAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: SYLTITFKTLSSFGHAGIFKHLQ*DGIRKL
Trigger: CAGTTTCCTAATTCCATCTCACTGGAGATGTTTAAA...GATTCCTGCGTGTCCGAAAGAACTTAACGTTTTAAAGGTGATTGTCAAGTAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CCA 90 bp CTTAGAGGAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACACAGATATGTAAACACTaGTACAAGAAAATCCAGACA +
Preference number: 4 (lower is better)
Translates to: LRGARCQICKHWYKKIQTQICKH*YKKIQT
Trigger: TGTCTGGATTTTCTTGTACCAGTGTTTACATATCTG...TGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR TCA 90 bp GCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTACAAATAAACAGTATGAAAAATaGCAAACACTCCTGTCCACA +
Preference number: 4 (lower is better)
Translates to: AIWFKRQFLLEPDISVTNKQYEK*QTLLST
Trigger: TGTGGACAGGAGTGTTTGTCATTTTTCATACTGTTT...ATTTGTAACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp GCTCTGTGGAGTGGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGACCGGCCACTCGCCCTaGCTCCCATGGGCTCCACCC +
Preference number: 5 (lower is better)
Translates to: ALWSGWHHLRLLGKAAGGTGHSP*LPWAPP
Trigger: GGGTGGAGCCCATGGGAGCAAGGGCGAGTGGCCGGT...CCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS GCA 90 bp GGGGAGAGAAGGTTAGCGCCGCATCTGCAGCCAGCACCGGGCACCTaGCGGCCGCCTCCAGCCTTGCAGCTGCACCGACCGTCCCCGCAA +
Preference number: 5 (lower is better)
Translates to: GERRLAPHLQPAPGT*RPPPALQLHRPSPQ
Trigger: TTGCGGGGACGGTCGGTGCAGCTGCAAGGCTGGAGGCGGCCGGCAGGTGCCCGGTGCTGGCTGCAGATGCGGCGCTAACCTTCTCTCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378512.5
ENST00000462129.1
CDS CCA 90 bp CCTCTCACCCTCAAGGACAGAACCGCCGAGCTGACACGGGGCAGGTaGGGCTACCAGCACCGGGGACGTGGGTGGCTGGGAGAGGGACAG +
Preference number: 5 (lower is better)
Translates to: PLTLKDRTAELTRGR*GYQHRGRGWLGEGQ
Trigger: CTGTCCCTCTCCCAGCCACCCACGTCCCCGGTGCTGGTAGCCCCACCTGCCCCGTGTCAGCTCGGCGGTTCTGTCCTTGAGGGTGAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493207.1
CDS TCA 90 bp TCTGGGCAGGCCAAGCCAAGCCTGACTGCCACCTGGCTCCTCAGCTaGGCACGCCGCCACCCCACTCCTGAGAGGAGACGGCGTCAGGAC +
Preference number: 5 (lower is better)
Translates to: SGQAKPSLTATWLLS*ARRHPTPERRRRQD
Trigger: GTCCTGACGCCGTCTCCTCTCAGGAGTGGGGTGGCGGCGTGCTCAGCTGAGGAGCCAGGTGGCAGTCAGGCTTGGCTTGGCCTGCCCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS GCA 90 bp GAGCACGCCGCCACCCCACTCCTGAGAGGAGACGGCGTCAGGACCTaGCGCTCTTCGGTAAAGCACAGCTCAGTACCCAGGGCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: EHAATPLLRGDGVRT*RSSVKHSSVPRACR
Trigger: CCGGCAGGCCCTGGGTACTGAGCTGTGCTTTACCGAAGAGCGGCAGGTCCTGACGCCGTCTCCTCTCAGGAGTGGGGTGGCGGCGTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CCA 90 bp CCCCGCCCAGGCACCTTGTCTGCTCCACGCCCTGTCCTGGGTCTCTaGTCTGGCAGGAGCAGGAGGGATCCTGTCCTCTCAGGGCCAGGT +
Preference number: 5 (lower is better)
Translates to: PRPGTLSAPRPVLGL*SGRSRRDPVLSGPG
Trigger: ACCTGGCCCTGAGAGGACAGGATCCCTCCTGCTCCTGCCAGACCAGAGACCCAGGACAGGGCGTGGAGCAGACAAGGTGCCTGGGCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS GCA 90 bp ACCCTCTGTGGATCCCTCAGGGTTCCCCCGCCCAGGCACCTTGTCTaGTCCACGCCCTGTCCTGGGTCTCTGGTCTGGCAGGAGCAGGAG +
Preference number: 5 (lower is better)
Translates to: TLCGSLRVPPPRHLV*STPCPGSLVWQEQE
Trigger: CTCCTGCTCCTGCCAGACCAGAGACCCAGGACAGGGCGTGGAGCAGACAAGGTGCCTGGGCGGGGGAACCCTGAGGGATCCACAGAGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CCA 90 bp CCCAGGCACCTTGTCTGCTCCACGCCCTGTCCTGGGTCTCTGGTCTaGCAGGAGCAGGAGGGATCCTGTCCTCTCAGGGCCAGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: PRHLVCSTPCPGSLV*QEQEGSCPLRARSS
Trigger: GGAGGACCTGGCCCTGAGAGGACAGGATCCCTCCTGCTCCTGCCAGACCAGAGACCCAGGACAGGGCGTGGAGCAGACAAGGTGCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CCA 90 bp CAGGGTTCCCCCGCCCAGGCACCTTGTCTGCTCCACGCCCTGTCCTaGGTCTCTGGTCTGGCAGGAGCAGGAGGGATCCTGTCCTCTCAG +
Preference number: 5 (lower is better)
Translates to: QGSPAQAPCLLHALS*VSGLAGAGGILSSQ
Trigger: CTGAGAGGACAGGATCCCTCCTGCTCCTGCCAGACCAGAGACCCAGGACAGGGCGTGGAGCAGACAAGGTGCCTGGGCGGGGGAACCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CAA 90 bp GCTCTGTGGAGTGGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGAATTCCTCGTTCTGTTaGGTGGGTAGCGAAGGACCG +
Preference number: 5 (lower is better)
Translates to: ALWSGWHHLRLLGKAAGGNSSFC*VGSEGP
Trigger: CGGTCCTTCGCTACCCACCAAACAGAACGAGGAATT...CCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp GAACCTACAAAGCCAGTCTGCTCCCTGCCAGCTTCGCTGCCCCTCATGGAGGGTCCTCCCTCGCAGGCCTaGCTCCTGCCTGCCCACCTG +
Preference number: 5 (lower is better)
Translates to: EPTKPVCSLPASLPLMEGPPSQA*LLPAHL
Trigger: CAGGTGGGCAGGCAGGAGCAAGGCCTGCGAGGGAGG...ACCCTCCATGAGGGGCAGCGAAGCTGGCAGGGAGCAGACTGGCTTTGTAGGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS GCA 90 bp CTTGCTGGCCATGGGGTCCACTGGCTGGTCCATGGCACGTGGCACTaGATGTCCTCCCTCCAAGGACCGCACCCTCTGTGGATCCCTCAG +
Preference number: 5 (lower is better)
Translates to: LAGHGVHWLVHGTWH*MSSLQGPHPLWIPQ
Trigger: CTGAGGGATCCACAGAGGGTGCGGTCCTTGGAGGGAGGACATGCAGTGCCACGTGCCATGGACCAGCCAGTGGACCCCATGGCCAGCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CCA 90 bp AGACGCATGGGCCCAGGAGCACAGGCCGCATTTTCATTCCCACACTaGCACCTCAGTCACCTGCGTGGGCGGGACTGTCCACCCCACTGG +
Preference number: 5 (lower is better)
Translates to: RRMGPGAQAAFSFPH*HLSHLRGRDCPPHW
Trigger: CCAGTGGGGTGGACAGTCCCGCCCACGCAGGTGACTGAGGTGCCAGTGTGGGAATGAAAATGCGGCCTGTGCTCCTGGGCCCATGCGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CAA 90 bp CTGCATCTCAGCCTGAGACGCACAGAGAGGTCTCTTCCTGACCCAGACGCACTCCCTCCCTCGCAGGCCTaGCTCCTGCCTGCCCACCTG +
Preference number: 5 (lower is better)
Translates to: LHLSLRRTERSLPDPDALPPSQA*LLPAHL
Trigger: CAGGTGGGCAGGCAGGAGCAAGGCCTGCGAGGGAGG...GAGTGCGTCTGGGTCAGGAAGAGACCTCTCTGTGCGTCTCAGGCTGAGATGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp CTGCCCACCTGGCACAGCGGGGACCGGCCACTCGCCCTTGCTCCCATGGGCTCCCTCCGTCGGAAGCATTaGGCACACACACCTTCAATA +
Preference number: 5 (lower is better)
Translates to: LPTWHSGDRPLALAPMGSLRRKH*AHTPSI
Trigger: TATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAG...GGAGCCCATGGGAGCAAGGGCGAGTGGCCGGTCCCCGCTGTGCCAGGTGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS GCA 90 bp GGCTCCATGACACCGTTCCTGGATCCTCTGTGCAGAGTGCCAGGCTaGTCAAGGAGACCGAGGGGCCCTTTGGTCTCGCGGAGCCGTGTA +
Preference number: 5 (lower is better)
Translates to: GSMTPFLDPLCRVPG*SRRPRGPLVSRSRV
Trigger: TACACGGCTCCGCGAGACCAAAGGGCCCCTCGGTCTCCTTGAGCAGCCTGGCACTCTGCACAGAGGATCCAGGAACGGTGTCATGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CCA 90 bp AACAGTGGAAGCCACGTGTCCAAGGTCCTGCCACAGCCCTGCTTCTaGGCAGGCCAAGCCAAGCCTGACTGCCACCTGGCTCCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: NSGSHVSKVLPQPCF*AGQAKPDCHLAPQL
Trigger: CAGCTGAGGAGCCAGGTGGCAGTCAGGCTTGGCTTGGCCTGCCCAGAAGCAGGGCTGTGGCAGGACCTTGGACACGTGGCTTCCACTGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CAA 90 bp GCTCTGTGGAGTGGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGCGCGCAAACCATGTCTaGCTGTTTGACTTACTTAGG +
Preference number: 5 (lower is better)
Translates to: ALWSGWHHLRLLGKAAGGRANHV*LFDLLR
Trigger: CCTAAGTAAGTCAAACAGCAAGACATGGTTTGCGCG...CCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS GCA 90 bp GTCTCAAACAGTGGAAGCCACGTGTCCAAGGTCCTGCCACAGCCCTaGTTCTGGGCAGGCCAAGCCAAGCCTGACTGCCACCTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: VSNSGSHVSKVLPQP*FWAGQAKPDCHLAP
Trigger: AGGAGCCAGGTGGCAGTCAGGCTTGGCTTGGCCTGCCCAGAAGCAGGGCTGTGGCAGGACCTTGGACACGTGGCTTCCACTGTTTGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CAA 90 bp AGCCTCAGTCCCGCTTCTAGCTGGCGAAGGCCTTGCCGGCATCCTCCTTGCCTCGCCACAAGGATGCCCTaGGTAGCCGCATGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: SLSPASSWRRPCRHPPCLATRMP*VAACLQ
Trigger: TTGAAGGCATGCGGCTACCAAGGGCATCCTTGTGGC...GAGGCAAGGAGGATGCCGGCAAGGCCTTCGCCAGCTAGAAGCGGGACTGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378512.5
CDS-3UTR CAA 90 bp CTCTGTGGAGTGGCTGGCACCACCTGCGGCTGCTGGGGAAGGCGGCTGGCGGGGAACACAAGATGGAACTaGAGATTTCCTGAAGCGCAG +
Preference number: 5 (lower is better)
Translates to: LCGVAGTTCGCWGRRLAGNTRWN*RFPEAQ
Trigger: CTGCGCTTCAGGAAATCTCAAGTTCCATCTTGTGTT...CCCCGCCAGCCGCCTTCCCCAGCAGCCGCAGGTGGTGCCAGCCACTCCACAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCCGGCCGCCTCCAGCCTaGCAGCTGCACCGACCGTCC +
Preference number: 5 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRRPPPA*QLHRPS
Trigger: GGACGGTCGGTGCAGCTGCAAGGCTGGAGGCGGCCG...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378512.5
CDS GCA 90 bp GTCTGTGCAGAATGTGGCTCCATGACACCGTTCCTGGATCCTCTGTaGAGAGTGCCAGGCTGCTCAAGGAGACCGAGGGGCCCTTTGGTC +
Preference number: 5 (lower is better)
Translates to: VCAECGSMTPFLDPL*RVPGCSRRPRGPLV
Trigger: GACCAAAGGGCCCCTCGGTCTCCTTGAGCAGCCTGGCACTCTGCACAGAGGATCCAGGAACGGTGTCATGGAGCCACATTCTGCACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS GCA 90 bp CATTTCACCAAGTCTCAAACAGTGGAAGCCACGTGTCCAAGGTCCTaGCACAGCCCTGCTTCTGGGCAGGCCAAGCCAAGCCTGACTGCC +
Preference number: 5 (lower is better)
Translates to: HFTKSQTVEATCPRS*HSPASGQAKPSLTA
Trigger: GGCAGTCAGGCTTGGCTTGGCCTGCCCAGAAGCAGGGCTGTGGCAGGACCTTGGACACGTGGCTTCCACTGTTTGAGACTTGGTGAAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CAA 90 bp AGAGGTCTCTTCCTGACCCAGACGCACTCACGAGCCAGGTCCTGGGGGTATGGGAATTCCTCGTTCTGTTaGGTGGGTAGCGAAGGACCG +
Preference number: 5 (lower is better)
Translates to: RGLFLTQTHSRARSWGYGNSSFC*VGSEGP
Trigger: CGGTCCTTCGCTACCCACCAAACAGAACGAGGAATT...CCCATACCCCCAGGACCTGGCTCGTGAGTGCGTCTGGGTCAGGAAGAGACCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCGCCCCAGGAGCAGCCTaGCTGGCCATGGGGTCCACT +
Preference number: 5 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRAPGAA*LAMGST
Trigger: AGTGGACCCCATGGCCAGCAAGGCTGCTCCTGGGGC...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CAA 90 bp TTGCCTCTGTACCTTCTCTTCCCATGTGTGAACGGGATGTACCGGTACTTAATCCCTCCCTCGCAGGCCTaGCTCCTGCCTGCCCACCTG +
Preference number: 5 (lower is better)
Translates to: LPLYLLFPCVNGMYRYLIPPSQA*LLPAHL
Trigger: CAGGTGGGCAGGCAGGAGCAAGGCCTGCGAGGGAGG...GATTAAGTACCGGTACATCCCGTTCACACATGGGAAGAGAAGGTACAGAGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378512.5
ENST00000378513.7
CDS-3UTR CAA 90 bp CAGAAGTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCGCAGCACTGGCTATCTaGGGTCAGGGACACACAAGC +
Preference number: 5 (lower is better)
Translates to: QKYHLGAALAILGQGHTSAALAI*GQGHTS
Trigger: GCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGC...GCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTACTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp GGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGCCCCGCCCAGGCACCTaGTCTGCTCCACGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: GIVNNGSKLFLQHVRQPQPRPGT*SAPRPV
Trigger: GACAGGGCGTGGAGCAGACAAGGTGCCTGGGCGGGG...CTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS TCA 90 bp ATCCCGCCCTCAAGTGCCTTGGCTCTCCCATCACAACTGATGCGCTaGAGTGATCCAGGCAGCTCCCTCCACATCATCAAGTCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: IPPSSALALPSQLMR*SDPGSSLHIIKSVQ
Trigger: CTGCACAGACTTGATGATGTGGAGGGAGCTGCCTGGATCACTTCAGCGCATCAGTTGTGATGGGAGAGCCAAGGCACTTGAGGGCGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS TCA 90 bp CAGACGCAATCCCGCCCTCAAGTGCCTTGGCTCTCCCATCACAACTaGTGCGCTGAAGTGATCCAGGCAGCTCCCTCCACATCATCAAGT +
Preference number: 5 (lower is better)
Translates to: QTQSRPQVPWLSHHN*CAEVIQAAPSTSSS
Trigger: ACTTGATGATGTGGAGGGAGCTGCCTGGATCACTTCAGCGCATCAGTTGTGATGGGAGAGCCAAGGCACTTGAGGGCGGGATTGCGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS TCA 90 bp CATCAGCATGTTCGCAGTGGGCAGGAGCCAGAACCTGCACCTTCCTaGAACCAACGCTTTTCCAGTCCCATCCTCACTGTGAGCACTGGG +
Preference number: 5 (lower is better)
Translates to: HQHVRSGQEPEPAPS*NQRFSSPILTVSTG
Trigger: CCCAGTGCTCACAGTGAGGATGGGACTGGAAAAGCGTTGGTTTCAGGAAGGTGCAGGTTCTGGCTCCTGCCCACTGCGAACATGCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS GCA 90 bp CTCCAGCGTTCAAAGGCAGCTCTAGGTCCCTCACTCACCAAGCAATaGACACGCAGCCCACACAAGAGCCTCTCACCCTCAAGGACAGAA +
Preference number: 5 (lower is better)
Translates to: LQRSKAALGPSLTKQ*TRSPHKSLSPSRTE
Trigger: TTCTGTCCTTGAGGGTGAGAGGCTCTTGTGTGGGCTGCGTGTGCATTGCTTGGTGAGTGAGGGACCTAGAGCTGCCTTTGAACGCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493207.1
CDS CCA 90 bp CAAGTGAAGGGCATCATGACCCCCATTTCACCAAGTCTCAAACAGTaGAAGCCACGTGTCCAAGGTCCTGCCACAGCCCTGCTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: QVKGIMTPISPSLKQ*KPRVQGPATALLLG
Trigger: GCCCAGAAGCAGGGCTGTGGCAGGACCTTGGACACGTGGCTTCCACTGTTTGAGACTTGGTGAAATGGGGGTCATGATGCCCTTCACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS GCA 90 bp TGCGCTGAAGTGATCCAGGCAGCTCCCTCCACATCATCAAGTCTGTaGAGAATGTGGCTCCATGACACCGTTCCTGGATCCTCTGTGCAG +
Preference number: 5 (lower is better)
Translates to: CAEVIQAAPSTSSSL*RMWLHDTVPGSSVQ
Trigger: CTGCACAGAGGATCCAGGAACGGTGTCATGGAGCCACATTCTGCACAGACTTGATGATGTGGAGGGAGCTGCCTGGATCACTTCAGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CAA 90 bp GTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCTTGAAGCCACAAGGATGCCCTaGGTAGCCGCATGCCAAAAT +
Preference number: 5 (lower is better)
Translates to: VPPGSSTGYLGSGTHKLEATRMP*VAACQN
Trigger: ATTTTGGCATGCGGCTACCAAGGGCATCCTTGTGGC...TTCAAGCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp CTGGGCAGGCGACCTGCTGACCCACGGTCACTGCTGTGTTCAGCCCCTCAGCTCTACTTAATCATGTGCTaGATTTGCCTCTTCATCGTG +
Preference number: 5 (lower is better)
Translates to: LGRRPADPRSLLCSAPQLYLIMC*ICLFIV
Trigger: CACGATGAAGAGGCAAATCAAGCACATGATTAAGTA...GAGCTGAGGGGCTGAACACAGCAGTGACCGTGGGTCAGCAGGTCGCCTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp CTTGGGTCAGGGACACACAAGCTTGAACGTGGCCTCTTAGAGGAGCTCGATGTCTTGCCGGCATCCTCCTaGCCTCTGTACCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: LGSGTHKLERGLLEELDVLPASS*PLYLLF
Trigger: GAAGAGAAGGTACAGAGGCAAGGAGGATGCCGGCAA...GACATCGAGCTCCTCTAAGAGGCCACGTTCAAGCTTGTGTGTCCCTGACCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp GGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGAGACCGAGGGGCCCTTaGGTCTCGCGGAGCCGTGTA +
Preference number: 5 (lower is better)
Translates to: GIVNNGSKLFLQHVRQPQRPRGP*VSRSRV
Trigger: TACACGGCTCCGCGAGACCAAAGGGCCCCTCGGTCT...CTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CAA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCCCGCCCTCAAGTGCCTaGGCTCTCCCATCACAACTG +
Preference number: 5 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRPPSSA*ALPSQL
Trigger: CAGTTGTGATGGGAGAGCCAAGGCACTTGAGGGCGG...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS TCA 90 bp CTGCACCTTCCTGAAACCAACGCTTTTCCAGTCCCATCCTCACTGTaGGCACTGGGGAAATCTTCCCTTCAGGTGGAAGGCAACAGGTGG +
Preference number: 5 (lower is better)
Translates to: LHLPETNAFPVPSSL*ALGKSSLQVEGNRW
Trigger: CCACCTGTTGCCTTCCACCTGAAGGGAAGATTTCCCCAGTGCTCACAGTGAGGATGGGACTGGAAAAGCGTTGGTTTCAGGAAGGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CCA 90 bp TTCCTGAAACCAACGCTTTTCCAGTCCCATCCTCACTGTGAGCACTaGGGAAATCTTCCCTTCAGGTGGAAGGCAACAGGTGGCCAGACG +
Preference number: 5 (lower is better)
Translates to: FLKPTLFQSHPHCEH*GNLPFRWKATGGQT
Trigger: CGTCTGGCCACCTGTTGCCTTCCACCTGAAGGGAAGATTTCCCCAGTGCTCACAGTGAGGATGGGACTGGAAAAGCGTTGGTTTCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CAA 90 bp CCCTCAGCTCGGCCCCAGCCTATTTCCCGCCTCCATTTGATGTTTCCAGGTTTTAATTCCTCGTTCTGTTaGGTGGGTAGCGAAGGACCG +
Preference number: 5 (lower is better)
Translates to: PSARPQPISRLHLMFPGFNSSFC*VGSEGP
Trigger: CGGTCCTTCGCTACCCACCAAACAGAACGAGGAATT...AAAACCTGGAAACATCAAATGGAGGCGGGAAATAGGCTGGGGCCGAGCTGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp AGCACCTCCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGGGCTCAAAACTGTTCTaGCAACACGTGAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: STSVGSIWHTHLQYTSRSGSKLF*QHVRQP
Trigger: AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCC...CGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp CTTAGAGGAGCTCGATGTCAGATATGTAAACACTGGTACAAGAAAATCCAGACAACCGGCCACTCGCCCTaGCTCCCATGGGCTCCACCC +
Preference number: 5 (lower is better)
Translates to: LRGARCQICKHWYKKIQTTGHSP*LPWAPP
Trigger: GGGTGGAGCCCATGGGAGCAAGGGCGAGTGGCCGGT...TGTCTGGATTTTCTTGTACCAGTGTTTACATATCTGACATCGAGCTCCTCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp GGCTGGGCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAAACCATGTCTTGCTGTTaGACTTACTTAGGAATGAGG +
Preference number: 5 (lower is better)
Translates to: GWAEHIPQDLMTTRGREKTMSCC*TYLGMR
Trigger: CCTCATTCCTAAGTAAGTCAAACAGCAAGACATGGT...TTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGCCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp GAAATCCATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAACCGGCCACTCGCCCTaGCTCCCATGGGCTCCACCC +
Preference number: 5 (lower is better)
Translates to: EIHAIWFKRQFLLEPDISTGHSP*LPWAPP
Trigger: GGGTGGAGCCCATGGGAGCAAGGGCGAGTGGCCGGT...TGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATGGATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp GGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGAATTCCTCGTTCTGTTaGGTGGGTAGCGAAGGACCG +
Preference number: 5 (lower is better)
Translates to: GIVNNGSKLFLQHVRQPQNSSFC*VGSEGP
Trigger: CGGTCCTTCGCTACCCACCAAACAGAACGAGGAATT...CTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000488353.2
ENST00000605895.6
CDS-3UTR CAA 90 bp TGTCAGTGTCTCATCTGGGACCACAGCTGTGATGTTCTGCTGTGCAATATGGGTGCCCCTCATGGAGGGTaGCATGAGGACAGATTTAAA +
Preference number: 5 (lower is better)
Translates to: CQCLIWDHSCDVLLCNMGAPHGG*HEDRFK
Trigger: TTTAAATCTGTCCTCATGCAACCCTCCATGAGGGGC...ACCCATATTGCACAGCAGAACATCACAGCTGTGGTCCCAGATGAGACACTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp GCAGAGCACATCCCCCAGGACTTGATGACCACACGGGGCAGAGAGAAACCAACCTCACTTGGTAAAACGTaGAGAGTATTTCTTTTCTCG +
Preference number: 5 (lower is better)
Translates to: AEHIPQDLMTTRGREKPTSLGKT*RVFLFS
Trigger: CGAGAAAAGAAATACTCTCAACGTTTTACCAAGTGA...GGTTGGTTTCTCTCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTGCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp GTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCTTGAAACCATGTCTTGCTGTTaGACTTACTTAGGAATGAGG +
Preference number: 5 (lower is better)
Translates to: VPPGSSTGYLGSGTHKLETMSCC*TYLGMR
Trigger: CCTCATTCCTAAGTAAGTCAAACAGCAAGACATGGT...TTCAAGCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp GTACCACCTGGGAGCAGCACTGGCTATCTTGGGTCAGGGACACACAAGCTTGAAATTTCCCGCCTCCATTaGATGTTTCCAGGTTTTCAA +
Preference number: 5 (lower is better)
Translates to: VPPGSSTGYLGSGTHKLEISRLH*MFPGFQ
Trigger: TTGAAAACCTGGAAACATCAAATGGAGGCGGGAAAT...TTCAAGCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGCTCCCAGGTGGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp ATGTCTTGCTGTTTGACTTACTTAGGAATGAGGATGACCCTGTATTCCTGGGTTCACATCCCCCAGGACTaGATGACCACACGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: MSCCLTYLGMRMTLYSWVHIPQD*MTTRGR
Trigger: TCTGCCCCGTGTGGTCATCAAGTCCTGGGGGATGTG...AACCCAGGAATACAGGGTCATCCTCATTCCTAAGTAAGTCAAACAGCAAGACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp ATTTCTTTTCTCGAATCAAAAACGCTGACATGCAAGTGGGTTCCGCCTCTCCCGCAGAACACCGGGACGTaGAAAGCGTCGAAGAAAGTA +
Preference number: 5 (lower is better)
Translates to: ISFLESKTLTCKWVPPLPQNTGT*KASKKV
Trigger: TACTTTCTTCGACGCTTTCAACGTCCCGGTGTTCTG...CGGGAGAGGCGGAACCCACTTGCATGTCAGCGTTTTTGATTCGAGAAAAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTTTGCCGGCATCCTCCTaGCCTCTGTACCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPLPASS*PLYLLF
Trigger: GAAGAGAAGGTACAGAGGCAAGGAGGATGCCGGCAA...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000488353.2
ENST00000605895.6
CDS-3UTR CAA 90 bp CCTCCGTCGGAAGCATTTGGCACACACACCTTCAATACACGTCAAGGTCGCTTCACCCCACACAGTTACTaGACAATCACCTTTAAAACG +
Preference number: 5 (lower is better)
Translates to: PPSEAFGTHTFNTRQGRFTPHSY*TITFKT
Trigger: CGTTTTAAAGGTGATTGTCAAGTAACTGTGTGGGGT...GAAGCGACCTTGACGTGTATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp CAAACCATGTCTTGCTGTTTGACTTACTTAGGAATGAGGATGACCCTGTATTCCGCAGCACTGGCTATCTaGGGTCAGGGACACACAAGC +
Preference number: 5 (lower is better)
Translates to: QTMSCCLTYLGMRMTLYSAALAI*GQGHTS
Trigger: GCTTGTGTGTCCCTGACCCAAGATAGCCAGTGCTGC...GGAATACAGGGTCATCCTCATTCCTAAGTAAGTCAAACAGCAAGACATGGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS CCA 90 bp TACAACTCTCAGGTAGTCCATCCATCTGCGTCCCAGTTTCTTATCTaGCAAGCGGAGGTAACGTATCTGCTCCTATTTCAACACTGCTGT +
Preference number: 5 (lower is better)
Translates to: YNSQVVHPSASQFLI*QAEVTYLLLFQHCC
Trigger: ACAGCAGTGTTGAAATAGGAGCAGATACGTTACCTCCGCTTGCCAGATAAGAAACTGGGACGCAGATGGATGGACTACCTGAGAGTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CAA 90 bp ATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCAGAACACCGGGACGTaGAAAGCGTCGAAGAAAGTA +
Preference number: 5 (lower is better)
Translates to: IVNNGSKLFLQHVRQPQSQNTGT*KASKKV
Trigger: TACTTTCTTCGACGCTTTCAACGTCCCGGTGTTCTG...GGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000488353.2
ENST00000605895.6
CDS-3UTR CAA 90 bp AAAGGCATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTGGCTCAAAACTGTTCTaGCAACACGTGAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: KGIVNNGSKLFLQHVRQPGSKLF*QHVRQP
Trigger: AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCC...AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAATGCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000488353.2
ENST00000605895.6
CDS-3UTR CAA 90 bp TGGCACACACACCTTCAATACACGTCAAGGTCGCTTCCAGTTTTAGAAAACAGAGGCTCAAAACTGTTCTaGCAACACGTGAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: WHTHLQYTSRSLPVLENRGSKLF*QHVRQP
Trigger: AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCC...TCTGTTTTCTAAAACTGGAAGCGACCTTGACGTGTATTGAAGGTGTGTGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp GTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCGCACCCCACACAGTTACTaGACAATCACCTTTAAAACG +
Preference number: 5 (lower is better)
Translates to: VNNGSKLFLQHVRQPQSRTPHSY*TITFKT
Trigger: CGTTTTAAAGGTGATTGTCAAGTAACTGTGTGGGGT...GCGGGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp ATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCCTCCGTCGGAAGCATTaGGCACACACACCTTCAATA +
Preference number: 5 (lower is better)
Translates to: IVNNGSKLFLQHVRQPQSLRRKH*AHTPSI
Trigger: TATTGAAGGTGTGTGTGCCAAATGCTTCCGACGGAG...GGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp ATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCGTGCCAGAGGTCACATaGTTCACCCACTTAATTCCC +
Preference number: 5 (lower is better)
Translates to: IVNNGSKLFLQHVRQPQSVPEVT*FTHLIP
Trigger: GGGAATTAAGTGGGTGAACAATGTGACCTCTGGCAC...GGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CAA 90 bp CTTCTCTTCCCATGTGTGAACGGGATGTACCGGTACTTAATCATGTGCTTGATTCAGAACACCGGGACGTaGAAAGCGTCGAAGAAAGTA +
Preference number: 5 (lower is better)
Translates to: LLFPCVNGMYRYLIMCLIQNTGT*KASKKV
Trigger: TACTTTCTTCGACGCTTTCAACGTCCCGGTGTTCTG...AATCAAGCACATGATTAAGTACCGGTACATCCCGTTCACACATGGGAAGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378512.5
ENST00000378513.7
CDS-3UTR CAA 90 bp TACTTGACAATCACCTTTAAAACGTTAAGTTCTTTCGGACACGCAGGAATCAGGTTGCCGGCATCCTCCTaGCCTCTGTACCTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: YLTITFKTLSSFGHAGIRLPASS*PLYLLF
Trigger: GAAGAGAAGGTACAGAGGCAAGGAGGATGCCGGCAA...CCTGATTCCTGCGTGTCCGAAAGAACTTAACGTTTTAAAGGTGATTGTCAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp ATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCATTCCTCAGCAACAGTaGGGGTCAGTCTTATTGTTC +
Preference number: 5 (lower is better)
Translates to: IVNNGSKLFLQHVRQPQSIPQQQ*GSVLLF
Trigger: GAACAATAAGACTGACCCCAACTGTTGCTGAGGAAT...GGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CAA 90 bp GCGTGCGACTTCCTGTCACACCTTAGGCCTGAGCGCTTATTAAGAAAACAGTATTACTTAATCATGTGCTaGATTTGCCTCTTCATCGTG +
Preference number: 5 (lower is better)
Translates to: ACDFLSHLRPERLLRKQYYLIMC*ICLFIV
Trigger: CACGATGAAGAGGCAAATCAAGCACATGATTAAGTA...ATACTGTTTTCTTAATAAGCGCTCAGGCCTAAGGTGTGACAGGAAGTCGCACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp CATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTACAGGCTCAAAACTGTTCTaGCAACACGTGAGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: HAIWFKRQFLLEPDISVTGSKLF*QHVRQP
Trigger: AGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCC...TGTAACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp GAAATCCATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCACAGAACACCGGGACGTaGAAAGCGTCGAAGAAAGTA +
Preference number: 5 (lower is better)
Translates to: EIHAIWFKRQFLLEPDISQNTGT*KASKKV
Trigger: TACTTTCTTCGACGCTTTCAACGTCCCGGTGTTCTG...TGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATGGATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp ATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCTACTTAATCATGTGCTaGATTTGCCTCTTCATCGTG +
Preference number: 5 (lower is better)
Translates to: IVNNGSKLFLQHVRQPQSYLIMC*ICLFIV
Trigger: CACGATGAAGAGGCAAATCAAGCACATGATTAAGTA...GGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000488353.2
ENST00000605895.6
CDS-3UTR CAA 90 bp GAGTATTTCTTTTCTCGAATCAAAAACGCTGACATGCAAGTGGGTTCCGCCTCTACCCCACACAGTTACTaGACAATCACCTTTAAAACG +
Preference number: 5 (lower is better)
Translates to: EYFFSRIKNADMQVGSASTPHSY*TITFKT
Trigger: CGTTTTAAAGGTGATTGTCAAGTAACTGTGTGGGGT...AGAGGCGGAACCCACTTGCATGTCAGCGTTTTTGATTCGAGAAAAGAAATACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp AATTCCATCCGTGAGAAACACTTGAACGTCACTGAAAAAGAAATCCATGCGATTGCCCCTCATGGAGGGTaGCATGAGGACAGATTTAAA +
Preference number: 5 (lower is better)
Translates to: NSIREKHLNVTEKEIHAIAPHGG*HEDRFK
Trigger: TTTAAATCTGTCCTCATGCAACCCTCCATGAGGGGC...AATCGCATGGATTTCTTTTTCAGTGACGTTCAAGTGTTTCTCACGGATGGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp AGAGAGTTCACCGTAGGCATCTTTAATAAACTAACTCCAGCAAAATGTGGGTACCGCGCAAACCATGTCTaGCTGTTTGACTTACTTAGG +
Preference number: 5 (lower is better)
Translates to: REFTVGIFNKLTPAKCGYRANHV*LFDLLR
Trigger: CCTAAGTAAGTCAAACAGCAAGACATGGTTTGCGCG...GTACCCACATTTTGCTGGAGTTAGTTTATTAAAGATGCCTACGGTGAACTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp ATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCTCACTTGGTAAAACGTaGAGAGTATTTCTTTTCTCG +
Preference number: 5 (lower is better)
Translates to: IVNNGSKLFLQHVRQPQSSLGKT*RVFLFS
Trigger: CGAGAAAAGAAATACTCTCAACGTTTTACCAAGTGA...GGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp ATTGTTAACAATGGCTCAAAACTGTTCTTGCAACACGTGAGGCAGCCTCAGTCCTTGGGGTCAGTCTTATaGTTCTCATTTACAGATAAG +
Preference number: 5 (lower is better)
Translates to: IVNNGSKLFLQHVRQPQSLGSVL*FSFTDK
Trigger: CTTATCTGTAAATGAGAACAATAAGACTGACCCCAA...GGACTGAGGCTGCCTCACGTGTTGCAAGAACAGTTTTGAGCCATTGTTAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS-3UTR CAA 90 bp ATCCATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTAACACAAGATGGAACTaGAGATTTCCTGAAGCGCAG +
Preference number: 5 (lower is better)
Translates to: IHAIWFKRQFLLEPDISVNTRWN*RFPEAQ
Trigger: CTGCGCTTCAGGAAATCTCAAGTTCCATCTTGTGTT...AACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp TACTTGACAATCACCTTTAAAACGTTAAGTTCTTTCGGACACGCAGGAATCAGGATTTCCCGCCTCCATTaGATGTTTCCAGGTTTTCAA +
Preference number: 5 (lower is better)
Translates to: YLTITFKTLSSFGHAGIRISRLH*MFPGFQ
Trigger: TTGAAAACCTGGAAACATCAAATGGAGGCGGGAAAT...CCTGATTCCTGCGTGTCCGAAAGAACTTAACGTTTTAAAGGTGATTGTCAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000605895.6
CDS-3UTR CAA 90 bp ATCCATGCGATTTGGTTTAAGCGCCAGTTTCTTCTAGAACCTGATATTTCAGTTTACTTAATCATGTGCTaGATTTGCCTCTTCATCGTG +
Preference number: 5 (lower is better)
Translates to: IHAIWFKRQFLLEPDISVYLIMC*ICLFIV
Trigger: CACGATGAAGAGGCAAATCAAGCACATGATTAAGTA...AACTGAAATATCAGGTTCTAGAAGAAACTGGCGCTTAAACCAAATCGCATGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378512.5
ENST00000378513.7
ENST00000605895.6
CDS GCA 72 bp CAGCCCTGCTTCTGGGCAGGCCAAGCCAAGCCTGACTaGCACCTGGCTCCTCAGCTGAGCACGCCGCCACCC +
Preference number: 6 (lower is better)
Translates to: QPCFWAGQAKPD*HLAPQLSTPPP
Trigger: GGGTGGCGGCGTGCTCAGCTGAGGAGCCAGGTGGCAGTCAGGCTTGGCTTGGCCTGCCCAGAAGCAGGGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CCA 72 bp CTCAAGGACAGAACCGCCGAGCTGACACGGGGCAGGTaGGGCTACCAGCACCGGGGACGTGGGTGGCTGGGA +
Preference number: 6 (lower is better)
Translates to: LKDRTAELTRGR*GYQHRGRGWLG
Trigger: TCCCAGCCACCCACGTCCCCGGTGCTGGTAGCCCCACCTGCCCCGTGTCAGCTCGGCGGTTCTGTCCTTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493207.1
CDS CAA 90 bp ACCGCACCCTCTGTGGATCCCTCAGGGTTCCCCCGCCCAGGCACCTaGTCTGCTCCACGCCCTGTCCTGGGTCTCTGGTCTGGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: TAPSVDPSGFPRPGT*SAPRPVLGLWSGRS
Trigger: GCTCCTGCCAGACCAGAGACCCAGGACAGGGCGTGGAGCAGACAAGGTGCCTGGGCGGGGGAACCCTGAGGGATCCACAGAGGGTGCGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CCA 72 bp GCTGGCCATGGGGTCCACTGGCTGGTCCATGGCACGTaGCACTGCATGTCCTCCCTCCAAGGACCGCACCCT +
Preference number: 6 (lower is better)
Translates to: AGHGVHWLVHGT*HCMSSLQGPHP
Trigger: AGGGTGCGGTCCTTGGAGGGAGGACATGCAGTGCCACGTGCCATGGACCAGCCAGTGGACCCCATGGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS GCA 72 bp CATGGGGTCCACTGGCTGGTCCATGGCACGTGGCACTaGATGTCCTCCCTCCAAGGACCGCACCCTCTGTGG +
Preference number: 6 (lower is better)
Translates to: HGVHWLVHGTWH*MSSLQGPHPLW
Trigger: CCACAGAGGGTGCGGTCCTTGGAGGGAGGACATGCAGTGCCACGTGCCATGGACCAGCCAGTGGACCCCATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CCA 72 bp AGCCACGTGTCCAAGGTCCTGCCACAGCCCTGCTTCTaGGCAGGCCAAGCCAAGCCTGACTGCCACCTGGCT +
Preference number: 6 (lower is better)
Translates to: SHVSKVLPQPCF*AGQAKPDCHLA
Trigger: AGCCAGGTGGCAGTCAGGCTTGGCTTGGCCTGCCCAGAAGCAGGGCTGTGGCAGGACCTTGGACACGTGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CCA 72 bp CAGCCTTGCTGGCCATGGGGTCCACTGGCTGGTCCATaGCACGTGGCACTGCATGTCCTCCCTCCAAGGACC +
Preference number: 6 (lower is better)
Translates to: QPCWPWGPLAGP*HVALHVLPPRT
Trigger: GGTCCTTGGAGGGAGGACATGCAGTGCCACGTGCCATGGACCAGCCAGTGGACCCCATGGCCAGCAAGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CAA 72 bp TCTGTGGATCCCTCAGGGTTCCCCCGCCCAGGCACCTaGTCTGCTCCACGCCCTGTCCTGGGTCTCTGGTCT +
Preference number: 6 (lower is better)
Translates to: SVDPSGFPRPGT*SAPRPVLGLWS
Trigger: AGACCAGAGACCCAGGACAGGGCGTGGAGCAGACAAGGTGCCTGGGCGGGGGAACCCTGAGGGATCCACAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS GCA 72 bp ACACCGTTCCTGGATCCTCTGTGCAGAGTGCCAGGCTaGTCAAGGAGACCGAGGGGCCCTTTGGTCTCGCGG +
Preference number: 6 (lower is better)
Translates to: TPFLDPLCRVPG*SRRPRGPLVSR
Trigger: CCGCGAGACCAAAGGGCCCCTCGGTCTCCTTGAGCAGCCTGGCACTCTGCACAGAGGATCCAGGAACGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS GCA 72 bp GCCACCCCACTCCTGAGAGGAGACGGCGTCAGGACCTaGCGCTCTTCGGTAAAGCACAGCTCAGTACCCAGG +
Preference number: 6 (lower is better)
Translates to: ATPLLRGDGVRT*RSSVKHSSVPR
Trigger: CCTGGGTACTGAGCTGTGCTTTACCGAAGAGCGGCAGGTCCTGACGCCGTCTCCTCTCAGGAGTGGGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS GCA 72 bp AGTGGAAGCCACGTGTCCAAGGTCCTGCCACAGCCCTaGTTCTGGGCAGGCCAAGCCAAGCCTGACTGCCAC +
Preference number: 6 (lower is better)
Translates to: SGSHVSKVLPQP*FWAGQAKPDCH
Trigger: GTGGCAGTCAGGCTTGGCTTGGCCTGCCCAGAAGCAGGGCTGTGGCAGGACCTTGGACACGTGGCTTCCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CCA 72 bp GGCACCTTGTCTGCTCCACGCCCTGTCCTGGGTCTCTaGTCTGGCAGGAGCAGGAGGGATCCTGTCCTCTCA +
Preference number: 6 (lower is better)
Translates to: GTLSAPRPVLGL*SGRSRRDPVLS
Trigger: TGAGAGGACAGGATCCCTCCTGCTCCTGCCAGACCAGAGACCCAGGACAGGGCGTGGAGCAGACAAGGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CCA 72 bp GGCCCAGGAGCACAGGCCGCATTTTCATTCCCACACTaGCACCTCAGTCACCTGCGTGGGCGGGACTGTCCA +
Preference number: 6 (lower is better)
Translates to: GPGAQAAFSFPH*HLSHLRGRDCP
Trigger: TGGACAGTCCCGCCCACGCAGGTGACTGAGGTGCCAGTGTGGGAATGAAAATGCGGCCTGTGCTCCTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CAA 90 bp CCTCTGTGCAGAGTGCCAGGCTGCTCAAGGAGACCGAGGGGCCCTTaGGTCTCGCGGAGCCGTGTAAACCAGACACAGAGGAGGAGCACC +
Preference number: 6 (lower is better)
Translates to: PLCRVPGCSRRPRGP*VSRSRVNQTQRRST
Trigger: GGTGCTCCTCCTCTGTGTCTGGTTTACACGGCTCCGCGAGACCAAAGGGCCCCTCGGTCTCCTTGAGCAGCCTGGCACTCTGCACAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CAA 72 bp AGAGTGCCAGGCTGCTCAAGGAGACCGAGGGGCCCTTaGGTCTCGCGGAGCCGTGTAAACCAGACACAGAGG +
Preference number: 6 (lower is better)
Translates to: RVPGCSRRPRGP*VSRSRVNQTQR
Trigger: CCTCTGTGTCTGGTTTACACGGCTCCGCGAGACCAAAGGGCCCCTCGGTCTCCTTGAGCAGCCTGGCACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS GCA 72 bp GAATGTGGCTCCATGACACCGTTCCTGGATCCTCTGTaGAGAGTGCCAGGCTGCTCAAGGAGACCGAGGGGC +
Preference number: 6 (lower is better)
Translates to: ECGSMTPFLDPL*RVPGCSRRPRG
Trigger: GCCCCTCGGTCTCCTTGAGCAGCCTGGCACTCTGCACAGAGGATCCAGGAACGGTGTCATGGAGCCACATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS TCA 72 bp TCCCGCCCTCAAGTGCCTTGGCTCTCCCATCACAACTaGTGCGCTGAAGTGATCCAGGCAGCTCCCTCCACA +
Preference number: 6 (lower is better)
Translates to: SRPQVPWLSHHN*CAEVIQAAPST
Trigger: TGTGGAGGGAGCTGCCTGGATCACTTCAGCGCATCAGTTGTGATGGGAGAGCCAAGGCACTTGAGGGCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS GCA 72 bp AGGCAACAGGTGGCCAGACGCAATCCCGCCCTCAAGTaGCTTGGCTCTCCCATCACAACTGATGCGCTGAAG +
Preference number: 6 (lower is better)
Translates to: RQQVARRNPALK*LGSPITTDALK
Trigger: CTTCAGCGCATCAGTTGTGATGGGAGAGCCAAGGCACTTGAGGGCGGGATTGCGTCTGGCCACCTGTTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CCA 72 bp ACCACGTGTGGCCCCAGAGCCCGATCTCTCCACAGCTaGCCCTTCACAGTGAAGAGAACGCTGTCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: TTCGPRARSLHS*PFTVKRTLSSG
Trigger: TCCTGAAGACAGCGTTCTCTTCACTGTGAAGGGCCAGCTGTGGAGAGATCGGGCTCTGGGGCCACACGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493207.1
CDS TCA 72 bp GTTCGCAGTGGGCAGGAGCCAGAACCTGCACCTTCCTaGAACCAACGCTTTTCCAGTCCCATCCTCACTGTG +
Preference number: 6 (lower is better)
Translates to: VRSGQEPEPAPS*NQRFSSPILTV
Trigger: CACAGTGAGGATGGGACTGGAAAAGCGTTGGTTTCAGGAAGGTGCAGGTTCTGGCTCCTGCCCACTGCGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS GCA 72 bp TCAAAGGCAGCTCTAGGTCCCTCACTCACCAAGCAATaGACACGCAGCCCACACAAGAGCCTCTCACCCTCA +
Preference number: 6 (lower is better)
Translates to: SKAALGPSLTKQ*TRSPHKSLSPS
Trigger: TGAGGGTGAGAGGCTCTTGTGTGGGCTGCGTGTGCATTGCTTGGTGAGTGAGGGACCTAGAGCTGCCTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493207.1
CDS CCA 72 bp GGCATCATGACCCCCATTTCACCAAGTCTCAAACAGTaGAAGCCACGTGTCCAAGGTCCTGCCACAGCCCTG +
Preference number: 6 (lower is better)
Translates to: GIMTPISPSLKQ*KPRVQGPATAL
Trigger: CAGGGCTGTGGCAGGACCTTGGACACGTGGCTTCCACTGTTTGAGACTTGGTGAAATGGGGGTCATGATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS TCA 72 bp CATTCCTACTTTAAAGATGAGAGGCCTCCTGGCCCCTaGGCTAGAGAAGACGCCAGGGGTGACGTTCACCTC +
Preference number: 6 (lower is better)
Translates to: HSYFKDERPPGP*AREDARGDVHL
Trigger: GAGGTGAACGTCACCCCTGGCGTCTTCTCTAGCTCAGGGGCCAGGAGGCCTCTCATCTTTAAAGTAGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CAA 72 bp AGCCTTCGAATGAAGGGGCGGAATTCCTCGTTCTGTTaGGTGGGTAGCGAAGGACCGTCATCTGCAGCAGGT +
Preference number: 6 (lower is better)
Translates to: SLRMKGRNSSFC*VGSEGPSSAAG
Trigger: ACCTGCTGCAGATGACGGTCCTTCGCTACCCACCAAACAGAACGAGGAATTCCGCCCCTTCATTCGAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000378518.5
CDS TCA 72 bp CTCCACATCATCAAGTCTGTGCAGAATGTGGCTCCATaGCACCGTTCCTGGATCCTCTGTGCAGAGTGCCAG +
Preference number: 6 (lower is better)
Translates to: LHIIKSVQNVAP*HRSWILCAECQ
Trigger: CTGGCACTCTGCACAGAGGATCCAGGAACGGTGTCATGGAGCCACATTCTGCACAGACTTGATGATGTGGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS TCA 72 bp TCAAGTGCCTTGGCTCTCCCATCACAACTGATGCGCTaGAGTGATCCAGGCAGCTCCCTCCACATCATCAAG +
Preference number: 6 (lower is better)
Translates to: SSALALPSQLMR*SDPGSSLHIIK
Trigger: CTTGATGATGTGGAGGGAGCTGCCTGGATCACTTCAGCGCATCAGTTGTGATGGGAGAGCCAAGGCACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS TCA 72 bp CCTGAAACCAACGCTTTTCCAGTCCCATCCTCACTGTaGGCACTGGGGAAATCTTCCCTTCAGGTGGAAGGC +
Preference number: 6 (lower is better)
Translates to: PETNAFPVPSSL*ALGKSSLQVEG
Trigger: GCCTTCCACCTGAAGGGAAGATTTCCCCAGTGCTCACAGTGAGGATGGGACTGGAAAAGCGTTGGTTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CCA 72 bp CCAGTGTCACGACCCATCGCACAGCCGTGTAGGGTGTaGACTTGTCTAGCCAGGACTGATAAATCTGTCCAA +
Preference number: 6 (lower is better)
Translates to: PVSRPIAQPCRV*TCLARTDKSVQ
Trigger: TTGGACAGATTTATCAGTCCTGGCTAGACAAGTCCACACCCTACACGGCTGTGCGATGGGTCGTGACACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000306256.13
ENST00000378512.5
ENST00000378513.7
ENST00000378518.5
ENST00000443438.5
ENST00000488353.2
ENST00000605895.6
CDS CCA 72 bp TGCTCCCTCGGCAGGGCAGTGAGGAGAAACAGACTCTaGTCTCAAGTTTGGCTTAAAGTCCCACCTGTGCTA +
Preference number: 6 (lower is better)
Translates to: CSLGRAVRRNRL*SQVWLKVPPVL
Trigger: TAGCACAGGTGGGACTTTAAGCCAAACTTGAGACCAGAGTCTGTTTCTCCTCACTGCCCTGCCGAGGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CAA 72 bp AGCCTTCGAATGAAGGGGCGGAATTCCTCGTTCTGTTaGGTGGGTAGCGAAGGACCGTCATCTGAGTCTTCC +
Preference number: 6 (lower is better)
Translates to: SLRMKGRNSSFC*VGSEGPSSESS
Trigger: GGAAGACTCAGATGACGGTCCTTCGCTACCCACCAAACAGAACGAGGAATTCCGCCCCTTCATTCGAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306256.13
ENST00000378512.5
ENST00000443438.5
ENST00000488353.2
ENST00000605895.6
CDS CAA 90 bp AACTCTGGGAGCCTTCGAATGAAGGGGCGGAATTCCTCGTTCTGTTaGGTGGGTAGCGAAGGACCGTCATCTGCAGCAGGTAAACTCGAA +
Preference number: 6 (lower is better)
Translates to: NSGSLRMKGRNSSFC*VGSEGPSSAAGKLE
Trigger: TTCGAGTTTACCTGCTGCAGATGACGGTCCTTCGCTACCCACCAAACAGAACGAGGAATTCCGCCCCTTCATTCGAAGGCTCCCAGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378513.7
ENST00000378518.5
CDS GCA 72 bp GCAAGAGCAGAACGGCAGCCACGGCCGCATCTGTCCTaGCTGGGAGCTGAGACTGGGTTTTATATTTTTAAA +
Preference number: 6 (lower is better)
Translates to: ARAERQPRPHLS*LGAETGFYIFK
Trigger: TTTAAAAATATAAAACCCAGTCTCAGCTCCCAGGCAGGACAGATGCGGCCGTGGCTGCCGTTCTGCTCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493207.1
CDS CCA 72 bp AGAAAACTGAAGCTCACAAAGACTAAAGAGTTGCCCTaGCCCATCAGCATGTTCGCAGTGGGCAGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: RKLKLTKTKELP*PISMFAVGRSQ
Trigger: CTGGCTCCTGCCCACTGCGAACATGCTGATGGGCCAGGGCAACTCTTTAGTCTTTGTGAGCTTCAGTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CCA 72 bp AGGGCAGTGAGGAGAAACAGACTCTGGTCTCAAGTTTaGCTTAAAGTCCCACCTGTGCTAAGCGGCTGTGAG +
Preference number: 6 (lower is better)
Translates to: RAVRRNRLWSQV*LKVPPVLSGCE
Trigger: CTCACAGCCGCTTAGCACAGGTGGGACTTTAAGCCAAACTTGAGACCAGAGTCTGTTTCTCCTCACTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488353.2
CDS CAA 72 bp TCGAAGAAAGTACAGACCATAGCCACAAGGATGCCCTaGGTAGCCGCATGCCTTCAAGTGGGGAGAGAAGGT +
Preference number: 6 (lower is better)
Translates to: SKKVQTIATRMP*VAACLQVGREG
Trigger: ACCTTCTCTCCCCACTTGAAGGCATGCGGCTACCAAGGGCATCCTTGTGGCTATGGTCTGTACTTTCTTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378512.5
ENST00000462129.1
CDS CAA 90 bp AACTCTGGGAGCCTTCGAATGAAGGGGCGGAATTCCTCGTTCTGTTaGGTGGGTAGCGAAGGACCGTCATCTGAGTCTTCCATTAAGGAA +
Preference number: 6 (lower is better)
Translates to: NSGSLRMKGRNSSFC*VGSEGPSSESSIKE
Trigger: TTCCTTAATGGAAGACTCAGATGACGGTCCTTCGCTACCCACCAAACAGAACGAGGAATTCCGCCCCTTCATTCGAAGGCTCCCAGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306256.13
ENST00000378512.5
ENST00000443438.5
ENST00000488353.2
ENST00000605895.6
CDS CAA 90 bp AGCATGATGAAGTACATCACCAGAATCGGCCAGAACACCGGGACGTaGAAAGCGTCGAAGAAAGTACAGACCATAGCCACAAGGATGCCC +
Preference number: 6 (lower is better)
Translates to: SMMKYITRIGQNTGT*KASKKVQTIATRMP
Trigger: GGGCATCCTTGTGGCTATGGTCTGTACTTTCTTCGACGCTTTCAACGTCCCGGTGTTCTGGCCGATTCTGGTGATGTACTTCATCATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000306256.13
ENST00000378512.5
ENST00000378513.7
ENST00000378518.5
ENST00000443438.5
ENST00000462129.1
ENST00000488353.2
ENST00000605895.6
CDS CAA 72 bp AAGTACATCACCAGAATCGGCCAGAACACCGGGACGTaGAAAGCGTCGAAGAAAGTACAGACCATAGCCACA +
Preference number: 6 (lower is better)
Translates to: KYITRIGQNTGT*KASKKVQTIAT
Trigger: TGTGGCTATGGTCTGTACTTTCTTCGACGCTTTCAACGTCCCGGTGTTCTGGCCGATTCTGGTGATGTACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000306256.13
ENST00000378512.5
ENST00000378513.7
ENST00000378518.5
ENST00000443438.5
ENST00000462129.1
ENST00000488353.2
ENST00000605895.6
CDS CAA 72 bp TCGAAGAAAGTACAGACCATAGCCACAAGGATGCCCTaGGTAGCCGCATGCCAAAATTTAAACTCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: SKKVQTIATRMP*VAACQNLNSGS
Trigger: GCTCCCAGAGTTTAAATTTTGGCATGCGGCTACCAAGGGCATCCTTGTGGCTATGGTCTGTACTTTCTTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306256.13
ENST00000378513.7
ENST00000378518.5
ENST00000443438.5
ENST00000488353.2
ENST00000605895.6
CDS GCA 72 bp CATCAGGAACACCAGCAAACAGATCCTTCCCGAAAATaGTGGGAGTCCCGTTTCTTTTTCAAATATTTATAC +
Preference number: 6 (lower is better)
Translates to: HQEHQQTDPSRK*WESRFFFKYLY
Trigger: GTATAAATATTTGAAAAAGAAACGGGACTCCCAGCATTTTCGGGAAGGATCTGTTTGCTGGTGTTCCTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000493207.1