RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for REPS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000169891

Ensembl transcript IDs: ENST00000303843.7, ENST00000357277.8, ENST00000469714.1, ENST00000470686.1, ENST00000481792.1

Found 523 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATaGCCTGTGAGGGTCAGTAGCCCTGTGCCCCTGTGGTCCCATTTT +
Preference number: 1 (lower is better)
Translates to: SISCHWSLKVVLTLA*PVRVSSPVPLWSHF
Trigger: AAAATGGGACCACAGGGGCACAGGGCTACTGACCCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR GCA 90 bp CTGGCCCTCCATGTCTGCTGCTCTCGGGAAATTCACATAACCAGATaGATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGT +
Preference number: 1 (lower is better)
Translates to: LALHVCCSREIHITR*ISPYKQAKQGGSQS
Trigger: ACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCATCTGGTTATGTGAATTTCCCGAGAGCAGCAGACATGGAGGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR GCA 90 bp CTTTGGTTTCCCCACATGCAAACTGCAAATGATGGGTACCAGTCCTaGCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCA +
Preference number: 1 (lower is better)
Translates to: LWFPHMQTANDGYQS*PALTSYSPVTVRWA
Trigger: TGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCAGGACTGGTACCCATCATTTGCAGTTTGCATGTGGGGAAACCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR TCA 90 bp CTGTTGTTTCTTAGGGCTTTGGTTTCCCCACATGCAAACTGCAAATaGTGGGTACCAGTCCTGCCCAGCTCTGACATCCTATTCTCCAGT +
Preference number: 1 (lower is better)
Translates to: LLFLRALVSPHANCK*WVPVLPSSDILFSS
Trigger: ACTGGAGAATAGGATGTCAGAGCTGGGCAGGACTGGTACCCATCATTTGCAGTTTGCATGTGGGGAAACCAAAGCCCTAAGAAACAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR GCA 90 bp GCACATGCTAGTCTTTCCTGGATTGAATTTACCAAAAGCCAAACATaGTGTGAAACGTCTGCAATCAGAACAGTGCTGATAGCCGGGCGG +
Preference number: 1 (lower is better)
Translates to: AHASLSWIEFTKSQT*CETSAIRTVLIAGR
Trigger: CCGCCCGGCTATCAGCACTGTTCTGATTGCAGACGTTTCACAGCATGTTTGGCTTTTGGTAAATTCAATCCAGGAAAGACTAGCATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR TCA 90 bp TTCTCTTGCCCAAAAATTTACATGAAAGGACTGAGTTGTCTGGGTTaGCAGCCTAGCTTGGCCAAGTTAAACAGCTCATTGCCAAAACCT +
Preference number: 1 (lower is better)
Translates to: FSCPKIYMKGLSCLG*QPSLAKLNSSLPKP
Trigger: AGGTTTTGGCAATGAGCTGTTTAACTTGGCCAAGCTAGGCTGTCAACCCAGACAACTCAGTCCTTTCATGTAAATTTTTGGGCAAGAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR TCA 90 bp CAGGAAACCAACCTACTCTATGTGATATACATACAAAAAGCATCCTaGAAGTACTTGGTTACAAGCATCCTGAAGGTTCTTGGTTATAAG +
Preference number: 1 (lower is better)
Translates to: QETNLLYVIYIQKAS*KYLVTSILKVLGYK
Trigger: CTTATAACCAAGAACCTTCAGGATGCTTGTAACCAAGTACTTTCAGGATGCTTTTTGTATGTATATCACATAGAGTAGGTTGGTTTCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR TCA 90 bp GCCAAAACCTCCACTTTACAGAGGTGTAAAGACCCAGTAAGTCTTTaGCATTCAATAGAAAACGATAGTCATGTATTATTTATAGCTAGA +
Preference number: 1 (lower is better)
Translates to: AKTSTLQRCKDPVSL*HSIENDSHVLFIAR
Trigger: TCTAGCTATAAATAATACATGACTATCGTTTTCTATTGAATGTCAAAGACTTACTGGGTCTTTACACCTCTGTAAAGTGGAGGTTTTGGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCGCTGGCATGCCCTGTaGGGGTCAGTAGCCCTGTGC +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHRWHAL*GSVALC
Trigger: GCACAGGGCTACTGACCCTCACAGGGCATGCCAGCG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGGCTCACTCTGGCACTaGCTTCATGGAGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHGSLWH*LHGGEG
Trigger: CCCCTCCCCTCCATGAAGTCAGTGCCAGAGTGAGCC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGGCGGGTGGATCACTTaGGGTCAGGAATTCGAGACT +
Preference number: 2 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPGGWIT*GQEFET
Trigger: AGTCTCGAATTCCTGACCTCAAGTGATCCACCCGCC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGGCTCACTCTGGCACTaGCTTCATGGAGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFGSLWH*LHGGEG
Trigger: CCCCTCCCCTCCATGAAGTCAGTGCCAGAGTGAGCC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCACCCAACCTCCCAATCTaGCTCACTCTGGCACTGACT +
Preference number: 2 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPPNLPI*LTLALT
Trigger: AGTCAGTGCCAGAGTGAGCCAGATTGGGAGGTTGGG...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGCTGAGTTGTCTGGGTTaGCAGCCTAGCTTGGCCAAG +
Preference number: 2 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRLSCLG*QPSLAK
Trigger: CTTGGCCAAGCTAGGCTGTCAACCCAGACAACTCAG...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCGCTGGCATGCCCTGTaGGGGTCAGTAGCCCTGTGC +
Preference number: 2 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVRWHAL*GSVALC
Trigger: GCACAGGGCTACTGACCCTCACAGGGCATGCCAGCG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR GCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGGGTCAGTAGCCCTGTaGCCCTGTGGTCCCATTTTC +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHGSVAL*PCGPIF
Trigger: GAAAATGGGACCACAGGGGCACAGGGCTACTGACCC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGGCGGGTGGATCACTTaGGGTCAGGAATTCGAGACT +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHGGWIT*GQEFET
Trigger: AGTCTCGAATTCCTGACCTCAAGTGATCCACCCGCC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR GCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGTGTTAACGCTGGCATaGCCTGTGAGGGTCAGTAGC +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHVLTLA*PVRVSS
Trigger: GCTACTGACCCTCACAGGGCATGCCAGCGTTAACAC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCAGCCCTGTGCCCCTGTaGTCCCATTTTCAACTTGGG +
Preference number: 2 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFSPVPL*SHFQLG
Trigger: CCCAAGTTGAAAATGGGACCACAGGGGCACAGGGCT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAAAGCCAAACATGCTGTaGAACGTCTGCAATCAGAAC +
Preference number: 2 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPKPNML*NVCNQN
Trigger: GTTCTGATTGCAGACGTTTCACAGCATGTTTGGCTT...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR GCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGGGTCAGTAGCCCTGTaGCCCTGTGGTCCCATTTTC +
Preference number: 2 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVGSVAL*PCGPIF
Trigger: GAAAATGGGACCACAGGGGCACAGGGCTACTGACCC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR GCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACTATACACCCCCACCCTaGTACCCTAAGAATGGGGAA +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHYTPPP*YPKNGE
Trigger: TTCCCCATTCTTAGGGTAGCAGGGTGGGGGTGTATA...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCCAGTGACAGTAAGATaGGCACAGCTTCCAGCTAAG +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHPVTVR*AQLPAK
Trigger: CTTAGCTGGAAGCTGTGCCCATCTTACTGTCACTGG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCATGGTTACAAGCATCCTaGAGGTTCTTGGTTATAAGG +
Preference number: 2 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPWLQAS*RFLVIR
Trigger: CCTTATAACCAAGAACCTTCAGGATGCTTGTAACCA...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCTGAGTTGTCTGGGTTaGCAGCCTAGCTTGGCCAAG +
Preference number: 2 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVLSCLG*QPSLAK
Trigger: CTTGGCCAAGCTAGGCTGTCAACCCAGACAACTCAG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR GCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGTGGCAAAAGCAATATaGCACATACGAGAGATGCCG +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHVAKAI*HIREMP
Trigger: CGGCATCTCTCGTATGTGGCATATTGCTTTTGCCAC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCATGCTTTGATGTCTGCTaGATAGGAAAGTGGCAAAAG +
Preference number: 2 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPCFDVC*IGKWQK
Trigger: CTTTTGCCACTTTCCTATCCAGCAGACATCAAAGCA...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACTCCATAAAATCAGGTTaGCGCCCCAAATCTGCCACT +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHSIKSG*RPKSAT
Trigger: AGTGGCAGATTTGGGGCGCCAACCTGATTTTATGGA...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR CAA 90 bp AACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCAAATaGCCATCAATGACTGACCTATCAGTGTTGGTAGGATCTCCCCTA +
Preference number: 2 (lower is better)
Translates to: NKRSRVAHRVIPTFK*PSMTDLSVLVGSPL
Trigger: TAGGGGAGATCCTACCAACACTGATAGGTCAGTCATTGATGGCAATTTGAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACACCACATTCCCTTGGTaGTATCTAGTGAGAAGGTGT +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHTTFPW*YLVRRC
Trigger: ACACCTTCTCACTAGATATCACCAAGGGAATGTGGT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR GCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCATTTTGCTTTGATGTCTaGTGGATAGGAAAGTGGCAA +
Preference number: 2 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPFCFDV*WIGKWQ
Trigger: TTGCCACTTTCCTATCCAGCAGACATCAAAGCAAAA...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTCAAAAGAAAGATCTTaGCAGACAAGGTCACCCACT +
Preference number: 2 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRSKERS*QTRSPT
Trigger: AGTGGGTGACCTTGTCTGCCAAGATCTTTCTTTTGA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAATACAAAAAGCATCCTaGAAGTACTTGGTTACAAGC +
Preference number: 2 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPIQKAS*KYLVTS
Trigger: GCTTGTAACCAAGTACTTTCAGGATGCTTTTTGTAT...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGACCCAGTAAGTCTTTaGCATTCAATAGAAAACGAT +
Preference number: 2 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPDPVSL*HSIEND
Trigger: ATCGTTTTCTATTGAATGTCAAAGACTTACTGGGTC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACTCAGCCTTTCATATTTaGTGGGTGGTTTCCAAACTC +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHSAFHI*WVVSKL
Trigger: GAGTTTGGAAACCACCCATCAAATATGAAAGGCTGA...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAATTGAAATCAAAGGCTaGATCCCACATATTGCAAAC +
Preference number: 2 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPIEIKG*IPHIAN
Trigger: GTTTGCAATATGTGGGATTCAGCCTTTGATTTCAAT...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCAAGCCAAACATGCTGTaGAACGTCTGCAATCAGAAC +
Preference number: 2 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFKPNML*NVCNQN
Trigger: GTTCTGATTGCAGACGTTTCACAGCATGTTTGGCTT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACTCAAATTGCCATCAATaGCTGACCTATCAGTGTTGG +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHSNCHQ*LTYQCW
Trigger: CCAACACTGATAGGTCAGTCATTGATGGCAATTTGA...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR GCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAGTGTTAACGCTGGCATaGCCTGTGAGGGTCAGTAGC +
Preference number: 2 (lower is better)
Translates to: AGLTLESFYGRGIMVISVVLTLA*PVRVSS
Trigger: GCTACTGACCCTCACAGGGCATGCCAGCGTTAACAC...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR GCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCACTTAGTTTATACGTCTaGCTAATGGAAATGAACTGC +
Preference number: 2 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPLSLYV*LMEMNC
Trigger: GCAGTTCATTTCCATTAGGCAGACGTATAAACTAAG...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTACACTGGAGTTAATTaGGCTCCTCTGAATCTGATA +
Preference number: 2 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRYTGVN*APLNLI
Trigger: TATCAGATTCAGAGGAGCCCAATTAACTCCAGTGTA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAAGCCCTGTGCCCCTGTaGTCCCATTTTCAACTTGGG +
Preference number: 2 (lower is better)
Translates to: AGLTLESFYGRGIMVISVSPVPL*SHFQLG
Trigger: CCCAAGTTGAAAATGGGACCACAGGGGCACAGGGCT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACCCAACCTCCCAATCTaGCTCACTCTGGCACTGACT +
Preference number: 2 (lower is better)
Translates to: AGLTLESFYGRGIMVISVPNLPI*LTLALT
Trigger: AGTCAGTGCCAGAGTGAGCCAGATTGGGAGGTTGGG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGTAATTCAACCCCTATaGATGGGGACAACATTGACC +
Preference number: 2 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFVIQPL*MGTTLT
Trigger: GGTCAATGTTGTCCCCATCCATAGGGGTTGAATTAC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACTGCTGGATAGGAAAGTaGCAAAAGCAATATGCCACA +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHCWIGK*QKQYAT
Trigger: TGTGGCATATTGCTTTTGCCACTTTCCTATCCAGCA...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR CAA 90 bp GTAATACCCACATTCAAATTGCCATCAATGACTGACCTATCAGTGTaGGTAGGATCTCCCCTAGCTTGTGCTGAAGGAGGAACAAGACAT +
Preference number: 2 (lower is better)
Translates to: VIPTFKLPSMTDLSV*VGSPLACAEGGTRH
Trigger: ATGTCTTGTTCCTCCTTCAGCACAAGCTAGGGGAGATCCTACCAACACTGATAGGTCAGTCATTGATGGCAATTTGAATGTGGGTATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTCAGCCTTTCATATTTaGTGGGTGGTTTCCAAACTC +
Preference number: 2 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFSAFHI*WVVSKL
Trigger: GAGTTTGGAAACCACCCATCAAATATGAAAGGCTGA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACAGGAATGGAATCCATTaGAAGCAACAGCTGTCAAAA +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHRNGIH*KQQLSK
Trigger: TTTTGACAGCTGTTGCTTTCAATGGATTCCATTCCT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCACAAGACATGTGAGCTaGGGACTCCAAAAACACAAA +
Preference number: 2 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFTRHVS*GLQKHK
Trigger: TTTGTGTTTTTGGAGTCCTCAGCTCACATGTCTTGT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR GCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCACCAAAAGCCAAACATaGTGTGAAACGTCTGCAATC +
Preference number: 2 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFTKSQT*CETSAI
Trigger: GATTGCAGACGTTTCACAGCATGTTTGGCTTTTGGT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR GCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATGGGAAGCTCTGGTTaGCATGATACGTTATATTGT +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHMGSSG*HDTLYC
Trigger: ACAATATAACGTATCATGGCAACCAGAGCTTCCCAT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTCAAAAGAAAGATCTTaGCAGACAAGGTCACCCACT +
Preference number: 2 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFSKERS*QTRSPT
Trigger: AGTGGGTGACCTTGTCTGCCAAGATCTTTCTTTTGA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCTGTGCTTTCATCTGTaGGACTGTAGGATCCCAATG +
Preference number: 2 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVLCFHL*DCRIPM
Trigger: CATTGGGATCCTACAGTCCCACAGATGAAAGCACAG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTGTTTCTTAGGGCTTTaGTTTCCCCACATGCAAACT +
Preference number: 2 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFCFLGL*FPHMQT
Trigger: AGTTTGCATGTGGGGAAACCAAAGCCCTAAGAAACA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACTACTTGTCAATAATATaGGAAGCTCTGGTTGCCATG +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHYLSII*EALVAM
Trigger: CATGGCAACCAGAGCTTCCCATATTATTGACAAGTA...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATACAAAAAGCATCCTaGAAGTACTTGGTTACAAGC +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHIQKAS*KYLVTS
Trigger: GCTTGTAACCAAGTACTTTCAGGATGCTTTTTGTAT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCTGGCTTCTGCAATTTaGGCTTACTGTTTTACATTA +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHLASAI*AYCFTL
Trigger: TAATGTAAAACAGTAAGCTCAAATTGCAGAAGCCAG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTAGCTCTCAGCTCTATTaGAATCAAAGGCTGAATCCC +
Preference number: 2 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVSSQLY*NQRLNP
Trigger: GGGATTCAGCCTTTGATTTCAATAGAGCTGAGAGCT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACTGTACTGGAAGATTATaGGATAAAGTGCACATGCTA +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHCTGRL*DKVHML
Trigger: TAGCATGTGCACTTTATCTCATAATCTTCCAGTACA...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCTTTTAGTTTTGCTTTaGTGTCTGCTGGATAGGAAA +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHLLVLL*CLLDRK
Trigger: TTTCCTATCCAGCAGACATCAAAGCAAAACTAAAAG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCAGGAATGGAATCCATTaGAAGCAACAGCTGTCAAAA +
Preference number: 2 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFRNGIH*KQQLSK
Trigger: TTTTGACAGCTGTTGCTTTCAATGGATTCCATTCCT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCCCCAGTTTGGATAGCTaGGTTCAAACAACAAATGTT +
Preference number: 2 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFPSLDS*VQTTNV
Trigger: AACATTTGTTGTTTGAACCCAGCTATCCAAACTGGG...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTACACTGGAGTTAATTaGGCTCCTCTGAATCTGATA +
Preference number: 2 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFYTGVN*APLNLI
Trigger: TATCAGATTCAGAGGAGCCCAATTAACTCCAGTGTA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTACTTGTCAATAATATaGGAAGCTCTGGTTGCCATG +
Preference number: 2 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFYLSII*EALVAM
Trigger: CATGGCAACCAGAGCTTCCCATATTATTGACAAGTA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCACAGTCAAACATCTATaGCAAGTAGTTGGGTTCAAA +
Preference number: 2 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFTVKHL*QVVGFK
Trigger: TTTGAACCCAACTACTTGTCATAGATGTTTGACTGT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTTTATGGTCACACCAATaGCTATCTAGTTGGAATCCC +
Preference number: 2 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVLWSHQ*LSSWNP
Trigger: GGGATTCCAACTAGATAGTCATTGGTGTGACCATAA...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGTCACATATCCAGCATaGGGACCACTTTTCTTTCAT +
Preference number: 2 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVVTYPA*GPLFFH
Trigger: ATGAAAGAAAAGTGGTCCTCATGCTGGATATGTGAC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCCTGGCTTCTGCAATTTaGGCTTACTGTTTTACATTA +
Preference number: 2 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFLASAI*AYCFTL
Trigger: TAATGTAAAACAGTAAGCTCAAATTGCAGAAGCCAG...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTGTACTGGAAGATTATaGGATAAAGTGCACATGCTA +
Preference number: 2 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFCTGRL*DKVHML
Trigger: TAGCATGTGCACTTTATCTCATAATCTTCCAGTACA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR GCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACAAACCTATCCAAAACTaGTTCAAAAAGACCCTATAC +
Preference number: 2 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHKPIQN*FKKTLY
Trigger: GTATAGGGTCTTTTTGAAGCAGTTTTGGATAGGTTT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR GCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCCTTAGTTTATACGTCTaGCTAATGGAAATGAACTGC +
Preference number: 2 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFLSLYV*LMEMNC
Trigger: GCAGTTCATTTCCATTAGGCAGACGTATAAACTAAG...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGCAACTAATAAACTGTaGTTACAGTTGAGTCCACCC +
Preference number: 2 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVATNKL*LQLSPP
Trigger: GGGTGGACTCAACTGTAACCACAGTTTATTAGTTGC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTTATTTGCTAGAAGACTaGTTTTTGGTAAGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVYLLED*FLVRSS
Trigger: GCTGCTCCTTACCAAAAATCAGTCTTCTAGCAAATA...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAAGCTCTCAGCTCTATTaGAATCAAAGGCTGAATCCC +
Preference number: 2 (lower is better)
Translates to: AGLTLESFYGRGIMVISVSSQLY*NQRLNP
Trigger: GGGATTCAGCCTTTGATTTCAATAGAGCTGAGAGCT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCCTAAAAATTTGTGCTaGCCCATTCATAATCTTCGG +
Preference number: 2 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVPKNLC*PIHNLR
Trigger: CCGAAGATTATGAATGGGTCAGCACAAATTTTTAGG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAAACTGCTATCCCAACTaGGAGCATATGTACTGGAAG +
Preference number: 2 (lower is better)
Translates to: AGLTLESFYGRGIMVISVNCYPN*EHMYWK
Trigger: CTTCCAGTACATATGCTCTCAGTTGGGATAGCAGTT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACCTTCTTCCCCAGTTTaGATAGCTGGGTTCAAACAA +
Preference number: 2 (lower is better)
Translates to: AGLTLESFYGRGIMVISVPSSPV*IAGFKQ
Trigger: TTGTTTGAACCCAGCTATCCAAACTGGGGAAGAAGG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAGTCCCATTTTCAACTTaGGCTTTCAGGAGAAGCAGT +
Preference number: 2 (lower is better)
Translates to: AGLTLESFYGRGIMVISVVPFST*AFRRSS
Trigger: ACTGCTTCTCCTGAAAGCCCAAGTTGAAAATGGGAC...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTAGCATTTCTTGCCATTaGTCTCTCAAAGTGGTGTTA +
Preference number: 2 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVSISCH*SLKVVL
Trigger: TAACACCACTTTGAGAGACCAATGGCAAGAAATGCT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTTTGGAGTCGTTTTATaGAAGAGGTATAATGGTGAT +
Preference number: 2 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFFGVVL*KRYNGD
Trigger: ATCACCATTATACCTCTTCCATAAAACGACTCCAAA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTACAGTCAAACATCTATaGCAAGTAGTTGGGTTCAAA +
Preference number: 2 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVTVKHL*QVVGFK
Trigger: TTTGAACCCAACTACTTGTCATAGATGTTTGACTGT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTATTATGGTCACACCAATaGCTATCTAGTTGGAATCCC +
Preference number: 2 (lower is better)
Translates to: AGLTLESFYGRGIMVISVLWSHQ*LSSWNP
Trigger: GGGATTCCAACTAGATAGTCATTGGTGTGACCATAA...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGACCCAGTAAGTCTTTaGCATTCAATAGAAAACGAT +
Preference number: 2 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVDPVSL*HSIEND
Trigger: ATCGTTTTCTATTGAATGTCAAAGACTTACTGGGTC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAGTCACATATCCAGCATaGGGACCACTTTTCTTTCAT +
Preference number: 2 (lower is better)
Translates to: AGLTLESFYGRGIMVISVVTYPA*GPLFFH
Trigger: ATGAAAGAAAAGTGGTCCTCATGCTGGATATGTGAC...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTATTGAAATCAAAGGCTaGATCCCACATATTGCAAAC +
Preference number: 2 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVIEIKG*IPHIAN
Trigger: GTTTGCAATATGTGGGATTCAGCCTTTGATTTCAAT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTATTTCTGTAGGATACTaGCTTCTGCAATTTGAGCTT +
Preference number: 2 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVISVGY*LLQFEL
Trigger: AAGCTCAAATTGCAGAAGCCAGTATCCTACAGAAAT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR CAA 90 bp TATTTATTTAATTTGGTCAGGCAAGGCAGTCAAAGCAGACTTCTCTaGCCCAAAAATTTACATGAAAGGACTGAGTTGTCTGGGTTGACA +
Preference number: 2 (lower is better)
Translates to: YLFNLVRQGSQSRLL*PKNLHERTELSGLT
Trigger: TGTCAACCCAGACAACTCAGTCCTTTCATGTAAATTTTTGGGCAAGAGAAGTCTGCTTTGACTGCCTTGCCTGACCAAATTAAATAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTATATTTGCTAGAAGACTaGTTTTTGGTAAGGAGCAGC +
Preference number: 2 (lower is better)
Translates to: AGLTLESFYGRGIMVISVYLLED*FLVRSS
Trigger: GCTGCTCCTTACCAAAAATCAGTCTTCTAGCAAATA...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAAAAACATCATCTGTTTaGGCCTTTATCCTCTGCCAT +
Preference number: 2 (lower is better)
Translates to: AGLTLESFYGRGIMVISVKTSSV*AFILCH
Trigger: ATGGCAGAGGATAAAGGCTCAAACAGATGATGTTTT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR GCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTAAACCTATCCAAAACTaGTTCAAAAAGACCCTATAC +
Preference number: 2 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVKPIQN*FKKTLY
Trigger: GTATAGGGTCTTTTTGAAGCAGTTTTGGATAGGTTT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACCCAGTTTGGATAGCTaGGTTCAAACAACAAATGTT +
Preference number: 2 (lower is better)
Translates to: AGLTLESFYGRGIMVISVPSLDS*VQTTNV
Trigger: AACATTTGTTGTTTGAACCCAGCTATCCAAACTGGG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR CAA 90 bp TTTATAGCTAGATATAATATCAAAATGGCACTAGAGAAGCAATTTTaGGCATATAGTGGTAGAGGGCACAGCGCCAGTCTAAATCTGATG +
Preference number: 2 (lower is better)
Translates to: FIARYNIKMALEKQF*AYSGRGHSASLNLM
Trigger: CATCAGATTTAGACTGGCGCTGTGCCCTCTACCACTATATGCCAAAAATTGCTTCTCTAGTGCCATTTTGATATTATATCTAGCTATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAAAACTCAGGGGAATTTaGTTGTCCAATGCAAGTTTT +
Preference number: 2 (lower is better)
Translates to: AGLTLESFYGRGIMVISVKLRGI*LSNASF
Trigger: AAAACTTGCATTGGACAATCAAATTCCCCTGAGTTT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAATTTCTGTAGGATACTaGCTTCTGCAATTTGAGCTT +
Preference number: 2 (lower is better)
Translates to: AGLTLESFYGRGIMVISVISVGY*LLQFEL
Trigger: AAGCTCAAATTGCAGAAGCCAGTATCCTACAGAAAT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR CAA 90 bp TTGTTCACATTCAGAATGTTCAAACCAGAACCTAATGATCCCTACTaGTCAATAATATGGGAAGCTCTGGTTGCCATGATACGTTATATT +
Preference number: 2 (lower is better)
Translates to: LFTFRMFKPEPNDPY*SIIWEALVAMIRYI
Trigger: AATATAACGTATCATGGCAACCAGAGCTTCCCATATTATTGACAAGTAGGGATCATTAGGTTCTGGTTTGAACATTCTGAATGTGAACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR GCA 72 bp TGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATaGCCTGTGAGGGTCAGTAGCCCTGTGCCCCTGTGG +
Preference number: 3 (lower is better)
Translates to: CHWSLKVVLTLA*PVRVSSPVPLW
Trigger: CCACAGGGGCACAGGGCTACTGACCCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR CCA 72 bp CCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATaGGCACAGCTTCCAGCTAAGCTGCCTCCTCTCCCA +
Preference number: 3 (lower is better)
Translates to: PALTSYSPVTVR*AQLPAKLPPLP
Trigger: TGGGAGAGGAGGCAGCTTAGCTGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR TCA 72 bp CCTATCAGTGTTGGTAGGATCTCCCCTAGCTTGTGCTaGAGGAGGAACAAGACATGTGAGCTGAGGACTCCA +
Preference number: 3 (lower is better)
Translates to: PISVGRISPSLC*RRNKTCELRTP
Trigger: TGGAGTCCTCAGCTCACATGTCTTGTTCCTCCTTCAGCACAAGCTAGGGGAGATCCTACCAACACTGATAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGGGTCCCATTTTCAACTaGGGCTTTCAGGAGAAGCAG +
Preference number: 3 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRGPIFN*GFQEKQ
Trigger: CTGCTTCTCCTGAAAGCCCAAGTTGAAAATGGGACC...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR CCA 72 bp CAGCTCTTCGAATCTGCTTGCGTTGCTTTTAAAGTCTaGCCCTCCATGTCTGCTGCTCTCGGGAAATTCACA +
Preference number: 3 (lower is better)
Translates to: QLFESACVAFKV*PSMSAALGKFT
Trigger: TGTGAATTTCCCGAGAGCAGCAGACATGGAGGGCCAGACTTTAAAAGCAACGCAAGCAGATTCGAAGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGGTCCCATTTTCAACTaGGGCTTTCAGGAGAAGCAG +
Preference number: 3 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHGPIFN*GFQEKQ
Trigger: CTGCTTCTCCTGAAAGCCCAAGTTGAAAATGGGACC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCACAGGCAGGTCTAACTTaGGAGTCGTTTTATGGAAGA +
Preference number: 3 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPQAGLT*ESFYGR
Trigger: TCTTCCATAAAACGACTCCAAAGTTAGACCTGCCTG...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR GCA 72 bp CATGTCTGCTGCTCTCGGGAAATTCACATAACCAGATaGATTTCTCCTTACAAACAAGCGAAGCAGGGTGGC +
Preference number: 3 (lower is better)
Translates to: HVCCSREIHITR*ISPYKQAKQGG
Trigger: GCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCATCTGGTTATGTGAATTTCCCGAGAGCAGCAGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAAAGCTCTCAGCTCTATaGAAATCAAAGGCTGAATCC +
Preference number: 3 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPKLSAL*KSKAES
Trigger: GGATTCAGCCTTTGATTTCAATAGAGCTGAGAGCTT...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAATCAGCCTTTCATATTaGATGGGTGGTTTCCAAACT +
Preference number: 3 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPISLSY*MGGFQT
Trigger: AGTTTGGAAACCACCCATCAAATATGAAAGGCTGAT...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCATCTGCCATTAAGCTATaGATAAAGCTTGCCAATGGA +
Preference number: 3 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPSAIKL*IKLANG
Trigger: TCCATTGGCAAGCTTTATCAATAGCTTAATGGCAGA...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACAAACTGTGGTTACAGTaGAGTCCACCCAAGAAGGTA +
Preference number: 3 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHKLWLQ*SPPKKV
Trigger: TACCTTCTTGGGTGGACTCAACTGTAACCACAGTTT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACTTGTTTCTTAGGGCTTaGGTTTCCCCACATGCAAAC +
Preference number: 3 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHLFLRA*VSPHAN
Trigger: GTTTGCATGTGGGGAAACCAAAGCCCTAAGAAACAA...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCCCTTCTTCCCCAGTTaGGATAGCTGGGTTCAAACA +
Preference number: 3 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVPFFPS*DSWVQT
Trigger: TGTTTGAACCCAGCTATCCAAACTGGGGAAGAAGGG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACAAGAGACAGCATTTCTaGCCATTGGTCTCTCAAAGT +
Preference number: 3 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHKRQHF*PLVSQS
Trigger: ACTTTGAGAGACCAATGGCAAGAAATGCTGTCTCTT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGCTGAATCCCACATATaGCAAACCTATCCAAAACTG +
Preference number: 3 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHAESHI*QTYPKL
Trigger: CAGTTTTGGATAGGTTTGCAATATGTGGGATTCAGC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACAAGCTCTCAGCTCTATaGAAATCAAAGGCTGAATCC +
Preference number: 3 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHKLSAL*KSKAES
Trigger: GGATTCAGCCTTTGATTTCAATAGAGCTGAGAGCTT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTTGTTTCTTAGGGCTTaGGTTTCCCCACATGCAAAC +
Preference number: 3 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFLFLRA*VSPHAN
Trigger: GTTTGCATGTGGGGAAACCAAAGCCCTAAGAAACAA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCAGGAATGGAATCCATaGAAAGCAACAGCTGTCAAA +
Preference number: 3 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHQEWNP*KATAVK
Trigger: TTTGACAGCTGTTGCTTTCAATGGATTCCATTCCTG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR TCA 72 bp CTAGCTTGTGCTGAAGGAGGAACAAGACATGTGAGCTaGGGACTCCAAAAACACAAATCCCCACTTCTTACT +
Preference number: 3 (lower is better)
Translates to: LACAEGGTRHVS*GLQKHKSPLLT
Trigger: AGTAAGAAGTGGGGATTTGTGTTTTTGGAGTCCTCAGCTCACATGTCTTGTTCCTCCTTCAGCACAAGCTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACAAGTTAAACAGCTCATaGCCAAAACCTCCACTTTAC +
Preference number: 3 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHKLNSS*PKPPLY
Trigger: GTAAAGTGGAGGTTTTGGCAATGAGCTGTTTAACTT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGACTGGCTTCTGCAATTaGAGCTTACTGTTTTACATT +
Preference number: 3 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRTGFCN*SLLFYI
Trigger: AATGTAAAACAGTAAGCTCAAATTGCAGAAGCCAGT...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGCTGAATCCCACATATaGCAAACCTATCCAAAACTG +
Preference number: 3 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFAESHI*QTYPKL
Trigger: CAGTTTTGGATAGGTTTGCAATATGTGGGATTCAGC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCCAGGAATGGAATCCATaGAAAGCAACAGCTGTCAAA +
Preference number: 3 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFQEWNP*KATAVK
Trigger: TTTGACAGCTGTTGCTTTCAATGGATTCCATTCCTG...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCATATGGATTATATTTaGCTGCTCACAGCTTTTGAC +
Preference number: 3 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHHMDYI*LLTAFD
Trigger: GTCAAAAGCTGTGAGCAGCAAAATATAATCCATATG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCAAAGCAGACTTCTCTaGCCCAAAAATTTACATGAA +
Preference number: 3 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHQSRLL*PKNLHE
Trigger: TTCATGTAAATTTTTGGGCAAGAGAAGTCTGCTTTG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTCTGCCATTAAGCTATaGATAAAGCTTGCCAATGGA +
Preference number: 3 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFSAIKL*IKLANG
Trigger: TCCATTGGCAAGCTTTATCAATAGCTTAATGGCAGA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCTAGTCTTTCCTGGATaGAATTTACCAAAAGCCAAA +
Preference number: 3 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHLVFPG*NLPKAK
Trigger: TTTGGCTTTTGGTAAATTCAATCCAGGAAAGACTAG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGTAGTGTGTCATTACTaGTGTGTTATGCACACACAT +
Preference number: 3 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFVVCHY*CVMHTH
Trigger: ATGTGTGTGCATAACACACAAGTAATGACACACTAC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCCTTTCTATGGATTTTTaGGGCCAGGAACTGTTGTTT +
Preference number: 3 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFLSMDF*GQELLF
Trigger: AAACAACAGTTCCTGGCCCAAAAAATCCATAGAAAG...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCCCTAATGATCCCTACTaGTCAATAATATGGGAAGCT +
Preference number: 3 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFPNDPY*SIIWEA
Trigger: AGCTTCCCATATTATTGACAAGTAGGGATCATTAGG...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCCATATGGATTATATTTaGCTGCTCACAGCTTTTGAC +
Preference number: 3 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFHMDYI*LLTAFD
Trigger: GTCAAAAGCTGTGAGCAGCAAAATATAATCCATATG...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGCAGCATCTAATACCTaGCAGAAGTACTTAAGAATA +
Preference number: 3 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFAASNT*QKYLRI
Trigger: TATTCTTAAGTACTTCTGCAAGGTATTAGATGCTGC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCTAGAGAAGCAATTTTaGGCATATAGTGGTAGAGGG +
Preference number: 3 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVLEKQF*AYSGRG
Trigger: CCCTCTACCACTATATGCCAAAAATTGCTTCTCTAG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCACTGGCTTCTGCAATTaGAGCTTACTGTTTTACATT +
Preference number: 3 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFTGFCN*SLLFYI
Trigger: AATGTAAAACAGTAAGCTCAAATTGCAGAAGCCAGT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR TCA 72 bp ACAACCTCCCATAAGGAATACAGGAATGGAATCCATTaGAAGCAACAGCTGTCAAAAACTCTGCCAAGAAAC +
Preference number: 3 (lower is better)
Translates to: TTSHKEYRNGIH*KQQLSKTLPRN
Trigger: GTTTCTTGGCAGAGTTTTTGACAGCTGTTGCTTTCAATGGATTCCATTCCTGTATTCCTTATGGGAGGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGAAACTCAGGGGAATTaGATTGTCCAATGCAAGTTT +
Preference number: 3 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVETQGN*IVQCKF
Trigger: AAACTTGCATTGGACAATCAAATTCCCCTGAGTTTC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGCAGCATCTAATACCTaGCAGAAGTACTTAAGAATA +
Preference number: 3 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVAASNT*QKYLRI
Trigger: TATTCTTAAGTACTTCTGCAAGGTATTAGATGCTGC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTAGACCCAGTAAGTCTTaGACATTCAATAGAAAACGA +
Preference number: 3 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVRPSKS*TFNRKR
Trigger: TCGTTTTCTATTGAATGTCAAAGACTTACTGGGTCT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCAAAGCAGACTTCTCTaGCCCAAAAATTTACATGAA +
Preference number: 3 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVQSRLL*PKNLHE
Trigger: TTCATGTAAATTTTTGGGCAAGAGAAGTCTGCTTTG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCTAGTCTTTCCTGGATaGAATTTACCAAAAGCCAAA +
Preference number: 3 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVLVFPG*NLPKAK
Trigger: TTTGGCTTTTGGTAAATTCAATCCAGGAAAGACTAG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR GCA 72 bp AGTCTTTCCTGGATTGAATTTACCAAAAGCCAAACATaGTGTGAAACGTCTGCAATCAGAACAGTGCTGATA +
Preference number: 3 (lower is better)
Translates to: SLSWIEFTKSQT*CETSAIRTVLI
Trigger: TATCAGCACTGTTCTGATTGCAGACGTTTCACAGCATGTTTGGCTTTTGGTAAATTCAATCCAGGAAAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAATCAGCCTTTCATATTaGATGGGTGGTTTCCAAACT +
Preference number: 3 (lower is better)
Translates to: AGLTLESFYGRGIMVISVISLSY*MGGFQT
Trigger: AGTTTGGAAACCACCCATCAAATATGAAAGGCTGAT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR CCA 72 bp TTGTTGGTAACAACCATTTCCCCTTCTTCCCCAGTTTaGATAGCTGGGTTCAAACAACAAATGTTTATCAAT +
Preference number: 3 (lower is better)
Translates to: LLVTTISPSSPV*IAGFKQQMFIN
Trigger: ATTGATAAACATTTGTTGTTTGAACCCAGCTATCCAAACTGGGGAAGAAGGGGAAATGGTTGTTACCAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR-3UTR CAA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAAGACCCAGTAAGTCTTaGACATTCAATAGAAAACGA +
Preference number: 3 (lower is better)
Translates to: AGLTLESFYGRGIMVISVRPSKS*TFNRKR
Trigger: TCGTTTTCTATTGAATGTCAAAGACTTACTGGGTCT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR TCA 72 bp GAATCCCAATTACTCAGGAAACCAACCTACTCTATGTaGTATACATACAAAAAGCATCCTGAAAGTACTTGG +
Preference number: 3 (lower is better)
Translates to: ESQLLRKPTYSM*YTYKKHPESTW
Trigger: CCAAGTACTTTCAGGATGCTTTTTGTATGTATATCACATAGAGTAGGTTGGTTTCCTGAGTAATTGGGATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR CCA 72 bp AAACCAGAACCTAATGATCCCTACTTGTCAATAATATaGGAAGCTCTGGTTGCCATGATACGTTATATTGTT +
Preference number: 3 (lower is better)
Translates to: KPEPNDPYLSII*EALVAMIRYIV
Trigger: AACAATATAACGTATCATGGCAACCAGAGCTTCCCATATTATTGACAAGTAGGGATCATTAGGTTCTGGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR TCA 72 bp AACCTACTCTATGTGATATACATACAAAAAGCATCCTaGAAGTACTTGGTTACAAGCATCCTGAAGGTTCTT +
Preference number: 3 (lower is better)
Translates to: NLLYVIYIQKAS*KYLVTSILKVL
Trigger: AAGAACCTTCAGGATGCTTGTAACCAAGTACTTTCAGGATGCTTTTTGTATGTATATCACATAGAGTAGGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR TCA 72 bp TTATCAATCCTAACAGTCTCATCAGCCTTTCATATTTaGTGGGTGGTTTCCAAACTCATGCATTTACAGATA +
Preference number: 3 (lower is better)
Translates to: LSILTVSSAFHI*WVVSKLMHLQI
Trigger: TATCTGTAAATGCATGAGTTTGGAAACCACCCATCAAATATGAAAGGCTGATGAGACTGTTAGGATTGATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR TCA 72 bp TGTGTGCTCGCCTATCTTAAAATATTGATGAGATTATaGAACTCAGGGGAATTTGATTGTCCAATGCAAGTT +
Preference number: 3 (lower is better)
Translates to: CVLAYLKILMRL*NSGEFDCPMQV
Trigger: AACTTGCATTGGACAATCAAATTCCCCTGAGTTTCATAATCTCATCAATATTTTAAGATAGGCGAGCACACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGCCGAGGTGGCGGGGTaGGAGGGTCCTCGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPAEVAG*EGPRPF
Trigger: AAAGGGGCGAGGACCCTCCCACCCCGCCACCTCGGC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGGCCGAGGTGGCGGGGTaGGAGGGTCCTCGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRAEVAG*EGPRPF
Trigger: AAAGGGGCGAGGACCCTCCCACCCCGCCACCTCGGC...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCACGCTGGCATGCCCTGTaGGGGTCAGTAGCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPRWHAL*GSVALC
Trigger: GCACAGGGCTACTGACCCTCACAGGGCATGCCAGCG...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGGCGGGCAGCTGCGATaGCCGAAACAGGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPGGQLR*PKQVSH
Trigger: GTGGCTGACCTGTTTCGGGCATCGCAGCTGCCCGCC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGGCTCACTCTGGCACTaGCTTCATGGAGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPGSLWH*LHGGEG
Trigger: CCCCTCCCCTCCATGAAGTCAGTGCCAGAGTGAGCC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGGGCTCACTCTGGCACTaGCTTCATGGAGGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRGSLWH*LHGGEG
Trigger: CCCCTCCCCTCCATGAAGTCAGTGCCAGAGTGAGCC...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAAGTTCTGTGATCTGGTaGAGCGTCTCGGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPSSVIW*SVSAGS
Trigger: GCTGCCCGCCGAGACGCTGCACCAGATCACAGAACT...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGGTTGCCGCAGAAGCTaGCCCACTTGCAGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPGCRRS*PTCSSG
Trigger: TCCACTGCTGCAAGTGGGCCAGCTTCTGCGGCAACC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACAGGGGAGGCGAGGGGTaGCATCGTGGGAGACTGTGT +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHRGGEG*HRGRLC
Trigger: ACACAGTCTCCCACGATGTCACCCCTCGCCTCCCCT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCACGGATAAGGGAAGCCTaGTGCCGAAGGGGCTTGGTT +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPRIREA*CRRGLV
Trigger: AACCAAGCCCCTTCGGCATCAGGCTTCCCTTATCCG...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCCGCTGGCATGCCCTGTaGGGGTCAGTAGCCCTGTGC +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFRWHAL*GSVALC
Trigger: GCACAGGGCTACTGACCCTCACAGGGCATGCCAGCG...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCACGCTGCTCCGCAGTTTaGTGTAGCCATGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPRCSAV*CSHGSR
Trigger: CCTTGAGCCATGGCTACAGCAAACTGCGGAGCAGCG...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCATGCAGGTATTCTGGCTaGAGAGTTGGAGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPCRYSG*RVGGRP
Trigger: GGGCCTCCCTCCAACTCTGCAGCCAGAATACCTGCA...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCACCTGGGATGGGGCTCTaGTCAGCTGTGGGAGTAACT +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPPGMGL*SAVGVT
Trigger: AGTTACTCCCACAGCTGAGCAGAGCCCCATCCCAGG...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGGGTCAGTAGCCCTGTaGCCCTGTGGTCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPGSVAL*PCGPIF
Trigger: GAAAATGGGACCACAGGGGCACAGGGCTACTGACCC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGAGGATCCCTCGGGCTaGACAAGGGGCTGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHEDPSG*TRGCLA
Trigger: AGCTAGGCAGCCCCTTGTCCAGCCCGAGGGATCCTC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGGAGGCCCTCAGGCAATaGGTAGCCGTTCTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVREALRQ*VAVLPS
Trigger: GCTCGGAAGAACGGCTACCCATTGCCTGAGGGCCTC...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCACTGAGTTGTCTGGGTTaGCAGCCTAGCTTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPLSCLG*QPSLAK
Trigger: CTTGGCCAAGCTAGGCTGTCAACCCAGACAACTCAG...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGTCTCGGCGGGCAGCTaGGATGCCCGAAACAGGTCA +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFVSAGS*DARNRS
Trigger: TGACCTGTTTCGGGCATCGCAGCTGCCCGCCGAGAC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGTGTTAACGCTGGCATaGCCTGTGAGGGTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPVLTLA*PVRVSS
Trigger: GCTACTGACCCTCACAGGGCATGCCAGCGTTAACAC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGATGCCGAAGGGGCTTaGTTCCTGGGCCCCCTGATG +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFDAEGA*FLGPLM
Trigger: CATCAGGGGGCCCAGGAACCAAGCCCCTTCGGCATC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGAGGCCCTCAGGCAATaGGTAGCCGTTCTTCCGAGC +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHEALRQ*VAVLPS
Trigger: GCTCGGAAGAACGGCTACCCATTGCCTGAGGGCCTC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCACCTCGCCCCTTTTCATaGCCTCTTCTATGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPPRPFS*PLLWRC
Trigger: GCACCTCCATAGAAGAGGCCATGAAAAGGGGCGAGG...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGCTACTTTCTGCAGCCTaGGATGGGGCTCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRLLSAA*DGALLS
Trigger: GCTGAGCAGAGCCCCATCCCAGGCTGCAGAAAGTAG...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTAGCCCTGTCCCTAGCTaGGGTGCTGCTGCGTCCGCC +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVSPVPS*GAAASA
Trigger: GGCGGACGCAGCAGCACCCCAGCTAGGGACAGGGCT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357277.8
CDS-3UTR TCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGGGGGTCACAACACAGTaGCCGGACGAAGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRGVTTQ*PDEVVP
Trigger: TGGAACAACTTCGTCCGGTCACTGTGTTGTGACCCC...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGGCGGGCAGCTGCGATaGCCGAAACAGGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVGGQLR*PKQVSH
Trigger: GTGGCTGACCTGTTTCGGGCATCGCAGCTGCCCGCC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGGGCTTAGGAAAAGCTaGCTGCAGGTATTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPGLRKS*LQVFWL
Trigger: CAGCCAGAATACCTGCAGGCAGCTTTTCCTAAGCCC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCCTGGGATGGGGCTCTaGTCAGCTGTGGGAGTAACT +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHPGMGL*SAVGVT
Trigger: AGTTACTCCCACAGCTGAGCAGAGCCCCATCCCAGG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTGCTGGACTACTTTCTaGAGCCTGGGATGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRCWTTF*SLGWGS
Trigger: AGAGCCCCATCCCAGGCTGCAGAAAGTAGTCCAGCA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGAGAAGCTGGCCCACTTaGAGCAGTGGAAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRRSWPT*SSGRLL
Trigger: CAAGAGCCTTCCACTGCTGCAAGTGGGCCAGCTTCT...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGAAAGAGCTTGGGTCTaGCTGAAGGGATCGGAACTG +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPERAWV*LKGSEL
Trigger: CAGTTCCGATCCCTTCAGCCAGACCCAAGCTCTTTC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGCCCACTTGCAGCAGTaGAAGGCTCTTGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPAHLQQ*KALGFL
Trigger: CAGAAAACCAAGAGCCTTCCACTGCTGCAAGTGGGC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCATCTTCCGAGCCACAATaGGATGAAACGCAGCACAGA +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPSSEPQ*DETQHR
Trigger: TCTGTGCTGCGTTTCATCTCATTGTGGCTCGGAAGA...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCACACTTGTTCAGACTGTaGTGGACAAGGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPHLFRL*WTRSWR
Trigger: CCTCCAAGACCTTGTCCATCACAGTCTGAACAAGTG...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGTCTCGGCGGGCAGCTaGGATGCCCGAAACAGGTCA +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVVSAGS*DARNRS
Trigger: TGACCTGTTTCGGGCATCGCAGCTGCCCGCCGAGAC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATGCGGTTTCATGGTTaGCGCAGAAGCTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHMRFHG*RRSWPT
Trigger: AGTGGGCCAGCTTCTGCGGCAACCATGAAACCGCAT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGGGTCAGTAGCCCTGTaGCCCTGTGGTCCCATTTTC +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFGSVAL*PCGPIF
Trigger: GAAAATGGGACCACAGGGGCACAGGGCTACTGACCC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCATATACACCCCCACCCTaGTACCCTAAGAATGGGGAA +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPYTPPP*YPKNGE
Trigger: TTCCCCATTCTTAGGGTAGCAGGGTGGGGGTGTATA...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCTGGCCCTCCATGTCTaGTGCTCTCGGGAAATTCAC +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHLALHV*CSREIH
Trigger: GTGAATTTCCCGAGAGCAGCAGACATGGAGGGCCAG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGAGGATCCCTCGGGCTaGACAAGGGGCTGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVEDPSG*TRGCLA
Trigger: AGCTAGGCAGCCCCTTGTCCAGCCCGAGGGATCCTC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGATGCCGAAGGGGCTTaGTTCCTGGGCCCCCTGATG +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVDAEGA*FLGPLM
Trigger: CATCAGGGGGCCCAGGAACCAAGCCCCTTCGGCATC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAATCCTTGGGAGTTGCTaGATCCTCAGACACGTCCTT +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPILGSC*ILRHVL
Trigger: AAGGACGTGTCTGAGGATCCAGCAACTCCCAAGGAT...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCCTCGCCCCTTTTCATaGCCTCTTCTATGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHPRPFS*PLLWRC
Trigger: GCACCTCCATAGAAGAGGCCATGAAAAGGGGCGAGG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACTTGGATGCGGTTTCATaGTTGCCGCAGAAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHLDAVS*LPQKLA
Trigger: GGCCAGCTTCTGCGGCAACCATGAAACCGCATCCAA...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACTCCTTGAGCTGCTGCTaGAGCTCACTGTTCAGCCGA +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHSLSCC*SSLFSR
Trigger: TCGGCTGAACAGTGAGCTCCAGCAGCAGCTCAAGGA...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCGAGGGGTGACATCGTaGGAGACTGTGTTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHRGVTS*ETVFPA
Trigger: AGCAGGAAACACAGTCTCCCACGATGTCACCCCTCG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357277.8
CDS-3UTR TCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGCTTGGCCACAGAACCTaGAATGAAAGAGCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRLGHRT*NERAWV
Trigger: GACCCAAGCTCTTTCATTTCAGGTTCTGTGGCCAAG...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGCAGAGAAGAGCTCCCTaGAAGAGCTTTAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRQRRAP*KSFRIW
Trigger: CCAGATCCTAAAGCTCTTTCAGGGAGCTCTTCTCTG...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACTGGATGCATCTGTTCTaGGCTGCTCCGCAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHWMHLF*AAPQFA
Trigger: AGCAAACTGCGGAGCAGCGCAGAACAGATGCATCCA...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCATGCGGTTTCATGGTTaGCGCAGAAGCTGGCCCACT +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFMRFHG*RRSWPT
Trigger: AGTGGGCCAGCTTCTGCGGCAACCATGAAACCGCAT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCATTTTGGACTGTTGGATaGGGTTTCATGGTTGCCGCA +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPFWTVG*GFMVAA
Trigger: TGCGGCAACCATGAAACCGCATCCAACAGTCCAAAA...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGGCCCTCCATGTCTGCTaGTCTCGGGAAATTCACATA +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRALHVC*SREIHI
Trigger: TATGTGAATTTCCCGAGAGCAGCAGACATGGAGGGC...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCGAGGGGTGACATCGTaGGAGACTGTGTTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHRGVTS*ETVFPV
Trigger: AACAGGAAACACAGTCTCCCACGATGTCACCCCTCG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303843.7
CDS-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTGCCTGCAGGTATTCTaGCTGCAGAGTTGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFCLQVF*LQSWRE
Trigger: CTCCCTCCAACTCTGCAGCCAGAATACCTGCAGGCA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGATCCTTGGGAGTTGCTaGATCCTCAGACACGTCCTT +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRILGSC*ILRHVL
Trigger: AAGGACGTGTCTGAGGATCCAGCAACTCCCAAGGAT...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTATTTCTGTGGCCGAGGTaGCGGGGTGGGAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVFLWPR*RGGRVL
Trigger: GAGGACCCTCCCACCCCGCCACCTCGGCCACAGAAA...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCCCCAACCTCCCAATCTaGCTCACTCTGGCACTGACT +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFPNLPI*LTLALT
Trigger: AGTCAGTGCCAGAGTGAGCCAGATTGGGAGGTTGGG...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGCCAGTGACAGTAAGATaGGCACAGCTTCCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRPVTVR*AQLPAK
Trigger: CTTAGCTGGAAGCTGTGCCCATCTTACTGTCACTGG...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGTTGCTTTTAAAGTCTaGCCCTCCATGTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPVAFKV*PSMSAA
Trigger: AGCAGCAGACATGGAGGGCCAGACTTTAAAAGCAAC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR CAA 72 bp TTAGAAGAGGGCAACAGCTCTTCGAATCTGCTTGCGTaGCTTTTAAAGTCTGGCCCTCCATGTCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LEEGNSSSNLLA*LLKSGPPCLLL
Trigger: GAGCAGCAGACATGGAGGGCCAGACTTTAAAAGCAACGCAAGCAGATTCGAAGAGCTGTTGCCCTCTTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGGGCTTTGATGGTGGCTaGGAATACAGTACATCCTTC +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRGFDGG*EYSTSF
Trigger: GAAGGATGTACTGTATTCTCAGCCACCATCAAAGCC...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAAACTGCTATCCCAACTaGGAGCATATGTACTGGAAG +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPNCYPN*EHMYWK
Trigger: CTTCCAGTACATATGCTCTCAGTTGGGATAGCAGTT...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAACCACATTCCCTTGGTaGTATCTAGTGAGAAGGTGT +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPTTFPW*YLVRRC
Trigger: ACACCTTCTCACTAGATATCACCAAGGGAATGTGGT...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGGCATTTCCCAATTGTTaGCAGCAGAGCAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRAFPNC*QQSKAS
Trigger: AGAAGCCTTGCTCTGCTGTCAACAATTGGGAAATGC...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAATAACCAACCCGCTTTaGACCACACAGTTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPITNPL*TTQFCD
Trigger: ATCACAGAACTGTGTGGTGCAAAGCGGGTTGGTTAT...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTTAGGAAAAGCTGCCTaGAGGTATTCTGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRLGKAA*RYSGCR
Trigger: TCTGCAGCCAGAATACCTGCAGGCAGCTTTTCCTAA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCAGCTTCCAGCTAAGCTaGCTCCTCTCCCAATCATGC +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFSFQLS*LLSQSC
Trigger: GCATGATTGGGAGAGGAGGCAGCTTAGCTGGAAGCT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGCCCTCCATGTCTGCTaGTCTCGGGAAATTCACATA +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHALHVC*SREIHI
Trigger: TATGTGAATTTCCCGAGAGCAGCAGACATGGAGGGC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGGGAGACTGTGTTTCCTaGTGTTTATCCTCATCGTCC +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRGDCVS*CLSSSS
Trigger: GGACGATGAGGATAAACAGCAGGAAACACAGTCTCC...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357277.8
CDS-3UTR CCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGAGCTTCATAAGGTGCTaGATGCATCTGTTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRSFIRC*MHLFCA
Trigger: AGCGCAGAACAGATGCATCCAGCACCTTATGAAGCT...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGACTGTTGGAATCCTTaGGAGTTGCTGGATCCTCAG +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHDCWNP*ELLDPQ
Trigger: CTGAGGATCCAGCAACTCCCAAGGATTCCAACAGTC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGCTGGCACACTGGGCTaGAAGACTTTATTCAGATCC +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHAGTLG*KTLFRS
Trigger: GGATCTGAATAAAGTCTTCCAGCCCAGTGTGCCAGC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGCAGTGGAAGGCTCTTaGTTTTCTGTAGCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPAVEGS*FSVAWF
Trigger: AAACCAAGCTACAGAAAACCAAGAGCCTTCCACTGC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGCCCACTTGCAGCAGTaGAAGGCTCTTGGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFAHLQQ*KALGFL
Trigger: CAGAAAACCAAGAGCCTTCCACTGCTGCAAGTGGGC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCATTGGAAGACTGCTTTTaGACTGTTGGATGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPLEDCF*TVGCGF
Trigger: GAAACCGCATCCAACAGTCCAAAAGCAGTCTTCCAA...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGTAATTCAACCCCTATaGATGGGGACAACATTGACC +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPVIQPL*MGTTLT
Trigger: GGTCAATGTTGTCCCCATCCATAGGGGTTGAATTAC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTCCATAAAATCAGGTTaGCGCCCCAAATCTGCCACT +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRSIKSG*RPKSAT
Trigger: AGTGGCAGATTTGGGGCGCCAACCTGATTTTATGGA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGCTCACCATCATTCTTTaGCATCATAAAGCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRLTIIL*HHKARQ
Trigger: CTGCCTCGCTTTATGATGTCAAAGAATGATGGTGAG...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGGGATCGGAACTGATTaGCATAGTACTCGCGCTGTT +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFGIGTD*HSTRAV
Trigger: AACAGCGCGAGTACTATGTCAATCAGTTCCGATCCC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAAAAGCTTTGATTTGGTaGAGAAGTTCTTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPKALIW*RSSWPQ
Trigger: CTGTGGCCAAGAACTTCTTCACCAAATCAAAGCTTT...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCCACTTGTTCAGACTGTaGTGGACAAGGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFHLFRL*WTRSWR
Trigger: CCTCCAAGACCTTGTCCATCACAGTCTGAACAAGTG...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTTGCGGATAGCAGTTTaGATGGCCTTCTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRLRIAV*MAFFCL
Trigger: CAAACAGAAGAAGGCCATTCAAACTGCTATCCGCAA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCTTGATGAACCTCCTTaGGCTGCTGCTGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVLDEPP*AAAGAH
Trigger: GTGAGCTCCAGCAGCAGCTCAAGGAGGTTCATCAAG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGGCGGGTGGATCACTTaGGGTCAGGAATTCGAGACT +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVGGWIT*GQEFET
Trigger: AGTCTCGAATTCCTGACCTCAAGTGATCCACCCGCC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGAAGCCAAACATGCTGTaGAACGTCTGCAATCAGAAC +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRKPNML*NVCNQN
Trigger: GTTCTGATTGCAGACGTTTCACAGCATGTTTGGCTT...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGAGGAACAAGACATGTaGGCTGAGGACTCCAAAAAC +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHEEQDM*AEDSKN
Trigger: GTTTTTGGAGTCCTCAGCTCACATGTCTTGTTCCTC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGCATTTCCCAATTGTTaGCAGCAGAGCAAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHAFPNC*QQSKAS
Trigger: AGAAGCCTTGCTCTGCTGTCAACAATTGGGAAATGC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGATAACCAACCCGCTTTaGACCACACAGTTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRITNPL*TTQFCD
Trigger: ATCACAGAACTGTGTGGTGCAAAGCGGGTTGGTTAT...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCATCTGGATCTTGGTCTTaGTTTGAGACTGTTGGAATC +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPSGSWS*FETVGI
Trigger: GATTCCAACAGTCTCAAAGCAAGACCAAGATCCAGA...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTAGAAGCTGGCCCACTTaGAGCAGTGGAAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVRSWPT*SSGRLL
Trigger: CAAGAGCCTTCCACTGCTGCAAGTGGGCCAGCTTCT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGAGCCAGCACTGCGTTTaGCTCTTTATTTTTGCGGAT +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRSQHCV*LFIFAD
Trigger: ATCCGCAAAAATAAAGAGGCAAACGCAGTGCTGGCT...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCAGCCGAGCCAGCACTaGGTTTGCCTCTTTATTTTT +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHQPSQH*VCLFIF
Trigger: AAAAATAAAGAGGCAAACGCAGTGCTGGCTCGGCTG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTATACACCCCCACCCTaGTACCCTAAGAATGGGGAA +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFYTPPP*YPKNGE
Trigger: TTCCCCATTCTTAGGGTAGCAGGGTGGGGGTGTATA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTCCACACAATGGGGTTaGATAATCAACTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRSTQWG*IINCSS
Trigger: GCTGGAACAGTTGATTATGCAACCCCATTGTGTGGA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACACAGTTCTGTGATCTaGTGCAGCGTCTCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVHSSVI*CSVSAG
Trigger: GCCCGCCGAGACGCTGCACCAGATCACAGAACTGTG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACAGCTTCATAAGGTGCTaGATGCATCTGTTCTGCGCT +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHSFIRC*MHLFCA
Trigger: AGCGCAGAACAGATGCATCCAGCACCTTATGAAGCT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGCTGGCACACTGGGCTaGAAGACTTTATTCAGATCC +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFAGTLG*KTLFRS
Trigger: GGATCTGAATAAAGTCTTCCAGCCCAGTGTGCCAGC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAGGTTGCCGCAGAAGCTaGCCCACTTGCAGCAGTGGA +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVGCRRS*PTCSSG
Trigger: TCCACTGCTGCAAGTGGGCCAGCTTCTGCGGCAACC...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTTTGGATGCGGTTTCATaGTTGCCGCAGAAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVLDAVS*LPQKLA
Trigger: GGCCAGCTTCTGCGGCAACCATGAAACCGCATCCAA...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTGGCCTTCTTCTGTTTaGAAGACTGCTTTTGGACTG +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRWPSSV*KTAFGL
Trigger: CAGTCCAAAAGCAGTCTTCCAAACAGAAGAAGGCCA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCATCAAAAGAAAGATCTTaGCAGACAAGGTCACCCACT +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPSKERS*QTRSPT
Trigger: AGTGGGTGACCTTGTCTGCCAAGATCTTTCTTTTGA...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTAGCCCTGTGCCCCTGTaGTCCCATTTTCAACTTGGG +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVSPVPL*SHFQLG
Trigger: CCCAAGTTGAAAATGGGACCACAGGGGCACAGGGCT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCCCAACCTCCCAATCTaGCTCACTCTGGCACTGACT +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVPNLPI*LTLALT
Trigger: AGTCAGTGCCAGAGTGAGCCAGATTGGGAGGTTGGG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGCAACTAATAAACTGTaGTTACAGTTGAGTCCACCC +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPATNKL*LQLSPP
Trigger: GGGTGGACTCAACTGTAACCACAGTTTATTAGTTGC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGGTAATTCAACCCCTATaGATGGGGACAACATTGACC +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRVIQPL*MGTTLT
Trigger: GGTCAATGTTGTCCCCATCCATAGGGGTTGAATTAC...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCTGTGCTTTCATCTGTaGGACTGTAGGATCCCAATG +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHLCFHL*DCRIPM
Trigger: CATTGGGATCCTACAGTCCCACAGATGAAAGCACAG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGTTGCTTTTAAAGTCTaGCCCTCCATGTCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHVAFKV*PSMSAA
Trigger: AGCAGCAGACATGGAGGGCCAGACTTTAAAAGCAAC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGTTAAATATGGAATCTaGACCTTAGTTCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPVKYGI*TLVPCS
Trigger: GCTGCATGGAACTAAGGTTCAGATTCCATATTTAAC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGGCTTTGATGGTGGCTaGGAATACAGTACATCCTTC +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFGFDGG*EYSTSF
Trigger: GAAGGATGTACTGTATTCTCAGCCACCATCAAAGCC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTTATGGTCACACCAATaGCTATCTAGTTGGAATCCC +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRLWSHQ*LSSWNP
Trigger: GGGATTCCAACTAGATAGTCATTGGTGTGACCATAA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTCAGCCTTTCATATTTaGTGGGTGGTTTCCAAACTC +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRSAFHI*WVVSKL
Trigger: GAGTTTGGAAACCACCCATCAAATATGAAAGGCTGA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAAAAACATCATCTGTTTaGGCCTTTATCCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPKTSSV*AFILCH
Trigger: ATGGCAGAGGATAAAGGCTCAAACAGATGATGTTTT...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTCAAATTGCCATCAATaGCTGACCTATCAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRSNCHQ*LTYQCW
Trigger: CCAACACTGATAGGTCAGTCATTGATGGCAATTTGA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACGCTGCTCCGCAGTTTaGTGTAGCCATGGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVRCSAV*CSHGSR
Trigger: CCTTGAGCCATGGCTACAGCAAACTGCGGAGCAGCG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGGGCTTAGGAAAAGCTaGCTGCAGGTATTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVGLRKS*LQVFWL
Trigger: CAGCCAGAATACCTGCAGGCAGCTTTTCCTAAGCCC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTCTGGATCTTGGTCTTaGTTTGAGACTGTTGGAATC +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRSGSWS*FETVGI
Trigger: GATTCCAACAGTCTCAAAGCAAGACCAAGATCCAGA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCAGTACATCCTTCTTTaGTGGACTACTTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHQYILL*WTTFCS
Trigger: GCTGCAGAAAGTAGTCCAGCAAAGAAGGATGTACTG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACAGCCAGCACTGCGTTTaGCTCTTTATTTTTGCGGAT +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHSQHCV*LFIFAD
Trigger: ATCCGCAAAAATAAAGAGGCAAACGCAGTGCTGGCT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGTGGCAAAAGCAATATaGCACATACGAGAGATGCCG +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFVAKAI*HIREMP
Trigger: CGGCATCTCTCGTATGTGGCATATTGCTTTTGCCAC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTAGCTTCCAGCTAAGCTaGCTCCTCTCCCAATCATGC +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVSFQLS*LLSQSC
Trigger: GCATGATTGGGAGAGGAGGCAGCTTAGCTGGAAGCT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTTTGGTTTCCCCACATaGAAACTGCAAATGATGGGT +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRFGFPT*KLQMMG
Trigger: ACCCATCATTTGCAGTTTGCATGTGGGGAAACCAAA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGAAAGAGCTTGGGTCTaGCTGAAGGGATCGGAACTG +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVERAWV*LKGSEL
Trigger: CAGTTCCGATCCCTTCAGCCAGACCCAAGCTCTTTC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCACCCAGTTTGGATAGCTaGGTTCAAACAACAAATGTT +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPPSLDS*VQTTNV
Trigger: AACATTTGTTGTTTGAACCCAGCTATCCAAACTGGG...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGTCCCATTTTCAACTTaGGCTTTCAGGAGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHVPFST*AFRRSS
Trigger: ACTGCTTCTCCTGAAAGCCCAAGTTGAAAATGGGAC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAAGCATTTCTTGCCATTaGTCTCTCAAAGTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPSISCH*SLKVVL
Trigger: TAACACCACTTTGAGAGACCAATGGCAAGAAATGCT...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCCTGTGCTTTCATCTGTaGGACTGTAGGATCCCAATG +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFLCFHL*DCRIPM
Trigger: CATTGGGATCCTACAGTCCCACAGATGAAAGCACAG...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGCTTCAGGATGGAACTaGTATCTGAAGGTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPASGWN*YLKVSL
Trigger: TAAAGAAACCTTCAGATACCAGTTCCATCCTGAAGC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCCAGAGGGCTTCAGGATaGAACTGGTATCTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFQRASG*NWYLKV
Trigger: AACCTTCAGATACCAGTTCCATCCTGAAGCCCTCTG...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCGAGCCACAATGAGATaGAACGCAGCACAGAACTCA +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVRATMR*NAAQNS
Trigger: TGAGTTCTGTGCTGCGTTTCATCTCATTGTGGCTCG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTTCTTCCGAGCCACAATaGGATGAAACGCAGCACAGA +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVSSEPQ*DETQHR
Trigger: TCTGTGCTGCGTTTCATCTCATTGTGGCTCGGAAGA...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCCTACGAATGGGCTTTaGTGGTGGCTGAGAATACAG +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVPTNGL*WWLRIQ
Trigger: CTGTATTCTCAGCCACCATCAAAGCCCATTCGTAGG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACTTGATGAACCTCCTTaGGCTGCTGCTGGAGCTCAC +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVLDEPP*AAAGAH
Trigger: GTGAGCTCCAGCAGCAGCTCAAGGAGGTTCATCAAG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAGGGGTCACAACACAGTaGCCGGACGAAGTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVGVTTQ*PDEVVP
Trigger: TGGAACAACTTCGTCCGGTCACTGTGTTGTGACCCC...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTATTTGCTAGAAGACTaGTTTTTGGTAAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRYLLED*FLVRSS
Trigger: GCTGCTCCTTACCAAAAATCAGTCTTCTAGCAAATA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCAGCTCTCAGCTCTATTaGAATCAAAGGCTGAATCCC +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFSSQLY*NQRLNP
Trigger: GGGATTCAGCCTTTGATTTCAATAGAGCTGAGAGCT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGCCTAAAAATTTGTGCTaGCCCATTCATAATCTTCGG +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRPKNLC*PIHNLR
Trigger: CCGAAGATTATGAATGGGTCAGCACAAATTTTTAGG...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAGGCGGGTGGATCACTTaGGGTCAGGAATTCGAGACT +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVGGWIT*GQEFET
Trigger: AGTCTCGAATTCCTGACCTCAAGTGATCCACCCGCC...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACACAAGACATGTGAGCTaGGGACTCCAAAAACACAAA +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHTRHVS*GLQKHK
Trigger: TTTGTGTTTTTGGAGTCCTCAGCTCACATGTCTTGT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTTCCCCTAGCTTGTGCTaGAGGAGGAACAAGACATGT +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVSPSLC*RRNKTC
Trigger: ACATGTCTTGTTCCTCCTTCAGCACAAGCTAGGGGA...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAGCATCTGTTCTGCGCTaGTCCGCAGTTTGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVASVLR*SAVCCS
Trigger: GCTACAGCAAACTGCGGAGCAGCGCAGAACAGATGC...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGTTCGTCGGGGTAACTaGTGTTATCCTGTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVVRRGN*CYPVVP
Trigger: GGGAACTACAGGATAACAGCAGTTACCCCGACGAAC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTATGCTGGACTACTTTCTaGAGCCTGGGATGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVCWTTF*SLGWGS
Trigger: AGAGCCCCATCCCAGGCTGCAGAAAGTAGTCCAGCA...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCCAGTACATCCTTCTTTaGTGGACTACTTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFQYILL*WTTFCS
Trigger: GCTGCAGAAAGTAGTCCAGCAAAGAAGGATGTACTG...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTTTTGCTTTGATGTCTaGTGGATAGGAAAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRFCFDV*WIGKWQ
Trigger: TTGCCACTTTCCTATCCAGCAGACATCAAAGCAAAA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGATGGGAAGCTCTGGTTaGCATGATACGTTATATTGT +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRMGSSG*HDTLYC
Trigger: ACAATATAACGTATCATGGCAACCAGAGCTTCCCAT...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTCCACACAATGGGGTTaGATAATCAACTGTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFSTQWG*IINCSS
Trigger: GCTGGAACAGTTGATTATGCAACCCCATTGTGTGGA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTCACTAGTTACATCCTaGTTAGGGACAGGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFSLVTS*LGTGRS
Trigger: TGACCTTCCTGTCCCTAACCAGGATGTAACTAGTGA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGACTGTTGGAATCCTTaGGAGTTGCTGGATCCTCAG +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVDCWNP*ELLDPQ
Trigger: CTGAGGATCCAGCAACTCCCAAGGATTCCAACAGTC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCATGTAGCTTGGTTTTCTaGTCTGAATTTCCTACGAAT +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPCSLVF*SEFPTN
Trigger: ATTCGTAGGAAATTCAGACCAGAAAACCAAGCTACA...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACTCAAAAGAAAGATCTTaGCAGACAAGGTCACCCACT +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHSKERS*QTRSPT
Trigger: AGTGGGTGACCTTGTCTGCCAAGATCTTTCTTTTGA...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACTGCTTTGATGTCTGCTaGATAGGAAAGTGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHCFDVC*IGKWQK
Trigger: CTTTTGCCACTTTCCTATCCAGCAGACATCAAAGCA...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCAAGAGCTTTAGGATCTaGCCCTGTTGTTCAACAGAG +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFKSFRI*PCCSTE
Trigger: CTCTGTTGAACAACAGGGCCAGATCCTAAAGCTCTT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR CAA 72 bp ACATTCAAATTGCCATCAATGACTGACCTATCAGTGTaGGTAGGATCTCCCCTAGCTTGTGCTGAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: TFKLPSMTDLSV*VGSPLACAEGG
Trigger: TCCTCCTTCAGCACAAGCTAGGGGAGATCCTACCAACACTGATAGGTCAGTCATTGATGGCAATTTGAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR CAA 72 bp AGCAGGGTGGCTCACAGAGTAATACCCACATTCAAATaGCCATCAATGACTGACCTATCAGTGTTGGTAGGA +
Preference number: 4 (lower is better)
Translates to: SRVAHRVIPTFK*PSMTDLSVLVG
Trigger: TCCTACCAACACTGATAGGTCAGTCATTGATGGCAATTTGAATGTGGGTATTACTCTGTGAGCCACCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTGGTTACAAGCATCCTaGAGGTTCTTGGTTATAAGG +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFWLQAS*RFLVIR
Trigger: CCTTATAACCAAGAACCTTCAGGATGCTTGTAACCA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGTCACATATCCAGCATaGGGACCACTTTTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFVTYPA*GPLFFH
Trigger: ATGAAAGAAAAGTGGTCCTCATGCTGGATATGTGAC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGCTGGCTTCTGCAATTTaGGCTTACTGTTTTACATTA +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRLASAI*AYCFTL
Trigger: TAATGTAAAACAGTAAGCTCAAATTGCAGAAGCCAG...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGATTGAAATCAAAGGCTaGATCCCACATATTGCAAAC +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRIEIKG*IPHIAN
Trigger: GTTTGCAATATGTGGGATTCAGCCTTTGATTTCAAT...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGCTTTTAGTTTTGCTTTaGTGTCTGCTGGATAGGAAA +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRLLVLL*CLLDRK
Trigger: TTTCCTATCCAGCAGACATCAAAGCAAAACTAAAAG...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGAGGAACAAGACATGTaGGCTGAGGACTCCAAAAAC +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVEEQDM*AEDSKN
Trigger: GTTTTTGGAGTCCTCAGCTCACATGTCTTGTTCCTC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTACATGTCCTGTGTATTaGAACCCTGCAATGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVTCPVY*NPAMPP
Trigger: AGGAGGCATTGCAGGGTTTCAATACACAGGACATGT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGATGGAACTGGTATCTaGAGGTTTCTTTACTGTAGT +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHDGTGI*RFLYCS
Trigger: ACTACAGTAAAGAAACCTTCAGATACCAGTTCCATC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTATGGATGCATCTGTTCTaGGCTGCTCCGCAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVWMHLF*AAPQFA
Trigger: AGCAAACTGCGGAGCAGCGCAGAACAGATGCATCCA...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCAGCCGAGCCAGCACTaGGTTTGCCTCTTTATTTTT +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVQPSQH*VCLFIF
Trigger: AAAAATAAAGAGGCAAACGCAGTGCTGGCTCGGCTG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAAAACCTATCCAAAACTaGTTCAAAAAGACCCTATAC +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPKPIQN*FKKTLY
Trigger: GTATAGGGTCTTTTTGAAGCAGTTTTGGATAGGTTT...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGCTCAGAGTAACTTATTaGATCATAAAAGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRLRVTY*IIKGEV
Trigger: CACCTCACCTTTTATGATGCAATAAGTTACTCTGAG...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCCTCTTCGAATCTGCTTaGGTTGCTTTTAAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFLFESA*VAFKVW
Trigger: CCAGACTTTAAAAGCAACGCAAGCAGATTCGAAGAG...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGAATGTAAAACTGTGTTaGACCAAAATAACCAACCCG +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRNVKLC*TKITNP
Trigger: CGGGTTGGTTATTTTGGTCCAACACAGTTTTACATT...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACAGCATTTCTTGCCATTaGTCTCTCAAAGTGGTGTTA +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHSISCH*SLKVVL
Trigger: TAACACCACTTTGAGAGACCAATGGCAAGAAATGCT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGCAACTAATAAACTGTaGTTACAGTTGAGTCCACCC +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFATNKL*LQLSPP
Trigger: GGGTGGACTCAACTGTAACCACAGTTTATTAGTTGC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCATTTGGAGTCGTTTTATaGAAGAGGTATAATGGTGAT +
Preference number: 4 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPFGVVL*KRYNGD
Trigger: ATCACCATTATACCTCTTCCATAAAACGACTCCAAA...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTTCCATAAAATCAGGTTaGCGCCCCAAATCTGCCACT +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVSIKSG*RPKSAT
Trigger: AGTGGCAGATTTGGGGCGCCAACCTGATTTTATGGA...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCTCACCATCATTCTTTaGCATCATAAAGCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVLTIIL*HHKARQ
Trigger: CTGCCTCGCTTTATGATGTCAAAGAATGATGGTGAG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAGGGATCGGAACTGATTaGCATAGTACTCGCGCTGTT +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVGIGTD*HSTRAV
Trigger: AACAGCGCGAGTACTATGTCAATCAGTTCCGATCCC...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACTTGGCCACAGAACCTaGAATGAAAGAGCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVLGHRT*NERAWV
Trigger: GACCCAAGCTCTTTCATTTCAGGTTCTGTGGCCAAG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAAAGTCACGAGGTTGTTaGTTTGCCGGCAGTGACTCA +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVKSRGC*FAGSDS
Trigger: TGAGTCACTGCCGGCAAATCAACAACCTCGTGACTT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACCTACGAATGGGCTTTaGTGGTGGCTGAGAATACAG +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVPTNGL*WWLRIQ
Trigger: CTGTATTCTCAGCCACCATCAAAGCCCATTCGTAGG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGACCCAGTAAGTCTTTaGCATTCAATAGAAAACGAT +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHDPVSL*HSIEND
Trigger: ATCGTTTTCTATTGAATGTCAAAGACTTACTGGGTC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCAAAACATCATCTGTTTaGGCCTTTATCCTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFKTSSV*AFILCH
Trigger: ATGGCAGAGGATAAAGGCTCAAACAGATGATGTTTT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTAAGCCAAACATGCTGTaGAACGTCTGCAATCAGAAC +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVKPNML*NVCNQN
Trigger: GTTCTGATTGCAGACGTTTCACAGCATGTTTGGCTT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACAAACTCAGGGGAATTTaGTTGTCCAATGCAAGTTTT +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHKLRGI*LSNASF
Trigger: AAAACTTGCATTGGACAATCAAATTCCCCTGAGTTT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGTGTTACACTGTAATTaGGATGTTTCCAACTACTGC +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFVLHCN*DVSNYC
Trigger: GCAGTAGTTGGAAACATCTCAATTACAGTGTAACAC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACAGAGAAGAGCTCCCTaGAAGAGCTTTAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVQRRAP*KSFRIW
Trigger: CCAGATCCTAAAGCTCTTTCAGGGAGCTCTTCTCTG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAGTTCGTCGGGGTAACTaGTGTTATCCTGTAGTTCCC +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVVRRGN*CYPVVP
Trigger: GGGAACTACAGGATAACAGCAGTTACCCCGACGAAC...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCATGGGAAGCTCTGGTTaGCATGATACGTTATATTGT +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFMGSSG*HDTLYC
Trigger: ACAATATAACGTATCATGGCAACCAGAGCTTCCCAT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTATCCATGCAGCTCAGCTaGGTTCCCAAATCGTATCTC +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVSMQLS*VPKSYL
Trigger: GAGATACGATTTGGGAACCCAGCTGAGCTGCATGGA...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGCAGTGGAAGGCTCTTaGTTTTCTGTAGCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVAVEGS*FSVAWF
Trigger: AAACCAAGCTACAGAAAACCAAGAGCCTTCCACTGC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTTTGGAAGACTGCTTTTaGACTGTTGGATGCGGTTTC +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVLEDCF*TVGCGF
Trigger: GAAACCGCATCCAACAGTCCAAAAGCAGTCTTCCAA...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCCTTCTTCCCCAGTTTaGATAGCTGGGTTCAAACAA +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVPSSPV*IAGFKQ
Trigger: TTGTTTGAACCCAGCTATCCAAACTGGGGAAGAAGG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTTCTGTAGGATACTaGCTTCTGCAATTTGAGCTT +
Preference number: 4 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHISVGY*LLQFEL
Trigger: AAGCTCAAATTGCAGAAGCCAGTATCCTACAGAAAT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTTTGGAGTCGTTTTATaGAAGAGGTATAATGGTGAT +
Preference number: 4 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRFGVVL*KRYNGD
Trigger: ATCACCATTATACCTCTTCCATAAAACGACTCCAAA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACCAGTGACAGTAAGATaGGCACAGCTTCCAGCTAAG +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVPVTVR*AQLPAK
Trigger: CTTAGCTGGAAGCTGTGCCCATCTTACTGTCACTGG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR CAA 72 bp GCTAAGCTGCCTCCTCTCCCAATCATGCCCAAGCACTaGTTTAATATTTGTAAAGCAGTTAGATCCTTCCAA +
Preference number: 4 (lower is better)
Translates to: AKLPPLPIMPKH*FNICKAVRSFQ
Trigger: TTGGAAGGATCTAACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAGCTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTTGGTTACAAGCATCCTaGAGGTTCTTGGTTATAAGG +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVWLQAS*RFLVIR
Trigger: CCTTATAACCAAGAACCTTCAGGATGCTTGTAACCA...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCATACAAAAAGCATCCTaGAAGTACTTGGTTACAAGC +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFIQKAS*KYLVTS
Trigger: GCTTGTAACCAAGTACTTTCAGGATGCTTTTTGTAT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTTCAGCCTTTCATATTTaGTGGGTGGTTTCCAAACTC +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVSAFHI*WVVSKL
Trigger: GAGTTTGGAAACCACCCATCAAATATGAAAGGCTGA...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGGATGGGGACAACATTaGCCTTCTGTCTATAGAATT +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVGWGQH*PSVYRI
Trigger: AATTCTATAGACAGAAGGTCAATGTTGTCCCCATCC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCCTTTTAGTTTTGCTTTaGTGTCTGCTGGATAGGAAA +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFLLVLL*CLLDRK
Trigger: TTTCCTATCCAGCAGACATCAAAGCAAAACTAAAAG...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTTCAAATTGCCATCAATaGCTGACCTATCAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVSNCHQ*LTYQCW
Trigger: CCAACACTGATAGGTCAGTCATTGATGGCAATTTGA...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTATTAGGAAAAGCTGCCTaGAGGTATTCTGGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVLGKAA*RYSGCR
Trigger: TCTGCAGCCAGAATACCTGCAGGCAGCTTTTCCTAA...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTACCAAAAGCCAAACATaGTGTGAAACGTCTGCAATC +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVTKSQT*CETSAI
Trigger: GATTGCAGACGTTTCACAGCATGTTTGGCTTTTGGT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTTTTGGTTTCCCCACATaGAAACTGCAAATGATGGGT +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVFGFPT*KLQMMG
Trigger: ACCCATCATTTGCAGTTTGCATGTGGGGAAACCAAA...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTGTAGCTTGGTTTTCTaGTCTGAATTTCCTACGAAT +
Preference number: 4 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFCSLVF*SEFPTN
Trigger: ATTCGTAGGAAATTCAGACCAGAAAACCAAGCTACA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACTGCTTTTGGACTGTTaGATGCGGTTTCATGGTTGC +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVLLLDC*MRFHGC
Trigger: GCAACCATGAAACCGCATCCAACAGTCCAAAAGCAG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACAGAGGGCTTCAGGATaGAACTGGTATCTGAAGGTT +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVQRASG*NWYLKV
Trigger: AACCTTCAGATACCAGTTCCATCCTGAAGCCCTCTG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCCAATCTCCACACAATaGGGTTGCATAATCAACTGT +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVPISTQ*GCIINC
Trigger: ACAGTTGATTATGCAACCCCATTGTGTGGAGATTGG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGTTAAATATGGAATCTaGACCTTAGTTCCATGCAGC +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVVKYGI*TLVPCS
Trigger: GCTGCATGGAACTAAGGTTCAGATTCCATATTTAAC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACTTGGTTTTCTGGTCTaGATTTCCTACGAATGGGCT +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVLGFLV*ISYEWA
Trigger: AGCCCATTCGTAGGAAATTCAGACCAGAAAACCAAG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTATTGCGGATAGCAGTTTaGATGGCCTTCTTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVLRIAV*MAFFCL
Trigger: CAAACAGAAGAAGGCCATTCAAACTGCTATCCGCAA...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTATAACACAACTCAGTTaGTCCAATCTCCACACAATG +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVITQLS*SNLHTM
Trigger: CATTGTGTGGAGATTGGATCAACTGAGTTGTGTTAT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTTTTTGCTTTGATGTCTaGTGGATAGGAAAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVFCFDV*WIGKWQ
Trigger: TTGCCACTTTCCTATCCAGCAGACATCAAAGCAAAA...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTATCACTAGTTACATCCTaGTTAGGGACAGGAAGGTCA +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVSLVTS*LGTGRS
Trigger: TGACCTTCCTGTCCCTAACCAGGATGTAACTAGTGA...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTATGGCCTTCTTCTGTTTaGAAGACTGCTTTTGGACTG +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVWPSSV*KTAFGL
Trigger: CAGTCCAAAAGCAGTCTTCCAAACAGAAGAAGGCCA...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTTACTTGTCAATAATATaGGAAGCTCTGGTTGCCATG +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVYLSII*EALVAM
Trigger: CATGGCAACCAGAGCTTCCCATATTATTGACAAGTA...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGCTTCAGGATGGAACTaGTATCTGAAGGTTTCTTTA +
Preference number: 4 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVASGWN*YLKVSL
Trigger: TAAAGAAACCTTCAGATACCAGTTCCATCCTGAAGC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAAAGAGCTTTAGGATCTaGCCCTGTTGTTCAACAGAG +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVKSFRI*PCCSTE
Trigger: CTCTGTTGAACAACAGGGCCAGATCCTAAAGCTCTT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAGGATGGGGACAACATTaGCCTTCTGTCTATAGAATT +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVGWGQH*PSVYRI
Trigger: AATTCTATAGACAGAAGGTCAATGTTGTCCCCATCC...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAACAAGACATGTGAGCTaGGGACTCCAAAAACACAAA +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVTRHVS*GLQKHK
Trigger: TTTGTGTTTTTGGAGTCCTCAGCTCACATGTCTTGT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACTCTTCGAATCTGCTTaGGTTGCTTTTAAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVLFESA*VAFKVW
Trigger: CCAGACTTTAAAAGCAACGCAAGCAGATTCGAAGAG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTATGCTGGATAGGAAAGTaGCAAAAGCAATATGCCACA +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVCWIGK*QKQYAT
Trigger: TGTGGCATATTGCTTTTGCCACTTTCCTATCCAGCA...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACCAATCTCCACACAATaGGGTTGCATAATCAACTGT +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVPISTQ*GCIINC
Trigger: ACAGTTGATTATGCAACCCCATTGTGTGGAGATTGG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAGATGGAACTGGTATCTaGAGGTTTCTTTACTGTAGT +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVDGTGI*RFLYCS
Trigger: ACTACAGTAAAGAAACCTTCAGATACCAGTTCCATC...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAATAACACAACTCAGTTaGTCCAATCTCCACACAATG +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVITQLS*SNLHTM
Trigger: CATTGTGTGGAGATTGGATCAACTGAGTTGTGTTAT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR CAA 72 bp ATTGTTGGTAACAACCATTTCCCCTTCTTCCCCAGTTaGGATAGCTGGGTTCAAACAACAAATGTTTATCAA +
Preference number: 4 (lower is better)
Translates to: IVGNNHFPFFPS*DSWVQTTNVYQ
Trigger: TTGATAAACATTTGTTGTTTGAACCCAGCTATCCAAACTGGGGAAGAAGGGGAAATGGTTGTTACCAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR CAA 72 bp TCAGCTCTATTGAAATCAAAGGCTGAATCCCACATATaGCAAACCTATCCAAAACTGCTTCAAAAAGACCCT +
Preference number: 4 (lower is better)
Translates to: SALLKSKAESHI*QTYPKLLQKDP
Trigger: AGGGTCTTTTTGAAGCAGTTTTGGATAGGTTTGCAATATGTGGGATTCAGCCTTTGATTTCAATAGAGCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR CAA 72 bp TTCAGAATGTTCAAACCAGAACCTAATGATCCCTACTaGTCAATAATATGGGAAGCTCTGGTTGCCATGATA +
Preference number: 4 (lower is better)
Translates to: FRMFKPEPNDPY*SIIWEALVAMI
Trigger: TATCATGGCAACCAGAGCTTCCCATATTATTGACAAGTAGGGATCATTAGGTTCTGGTTTGAACATTCTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAACAGTCAAACATCTATaGCAAGTAGTTGGGTTCAAA +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVTVKHL*QVVGFK
Trigger: TTTGAACCCAACTACTTGTCATAGATGTTTGACTGT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAGACCCAGTAAGTCTTTaGCATTCAATAGAAAACGAT +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVDPVSL*HSIEND
Trigger: ATCGTTTTCTATTGAATGTCAAAGACTTACTGGGTC...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR TCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAATTGAAATCAAAGGCTaGATCCCACATATTGCAAAC +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVIEIKG*IPHIAN
Trigger: GTTTGCAATATGTGGGATTCAGCCTTTGATTTCAAT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR GCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACTTAGTTTATACGTCTaGCTAATGGAAATGAACTGC +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVLSLYV*LMEMNC
Trigger: GCAGTTCATTTCCATTAGGCAGACGTATAAACTAAG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CCA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAAATGTAAAACTGTGTTaGACCAAAATAACCAACCCG +
Preference number: 4 (lower is better)
Translates to: AGLTLESFYGRGIMVISVNVKLC*TKITNP
Trigger: CGGGTTGGTTATTTTGGTCCAACACAGTTTTACATT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
3UTR CAA 72 bp TTTATCAATCCTAACAGTCTCATCAGCCTTTCATATTaGATGGGTGGTTTCCAAACTCATGCATTTACAGAT +
Preference number: 4 (lower is better)
Translates to: FINPNSLISLSY*MGGFQTHAFTD
Trigger: ATCTGTAAATGCATGAGTTTGGAAACCACCCATCAAATATGAAAGGCTGATGAGACTGTTAGGATTGATAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS GCA 90 bp ACACAGTTCTGTGATCTGGTGCAGCGTCTCGGCGGGCAGCTGCGATaGCCGAAACAGGTCAGCCACGGGGCCGGCGGCCGCAGTGGCCGT +
Preference number: 5 (lower is better)
Translates to: TQFCDLVQRLGGQLR*PKQVSHGAGGRSGR
Trigger: ACGGCCACTGCGGCCGCCGGCCCCGTGGCTGACCTGTTTCGGGCATCGCAGCTGCCCGCCGAGACGCTGCACCAGATCACAGAACTGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS GCA 90 bp GCACCACACAGTTCTGTGATCTGGTGCAGCGTCTCGGCGGGCAGCTaGGATGCCCGAAACAGGTCAGCCACGGGGCCGGCGGCCGCAGTG +
Preference number: 5 (lower is better)
Translates to: APHSSVIWCSVSAGS*DARNRSATGPAAAV
Trigger: CACTGCGGCCGCCGGCCCCGTGGCTGACCTGTTTCGGGCATCGCAGCTGCCCGCCGAGACGCTGCACCAGATCACAGAACTGTGTGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS CCA 90 bp GCACACTGGGCTGGAAGACTTTATTCAGATCCAAGGAGGAGGCTCTaGAATGGGTTTTCTGTGGCCGAGGTGGCGGGGTGGGAGGGTCCT +
Preference number: 5 (lower is better)
Translates to: AHWAGRLYSDPRRRL*NGFSVAEVAGWEGP
Trigger: AGGACCCTCCCACCCCGCCACCTCGGCCACAGAAAACCCATTCCAGAGCCTCCTCCTTGGATCTGAATAAAGTCTTCCAGCCCAGTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS GCA 90 bp CTTCATAAGGTGCTGGATGCATCTGTTCTGCGCTGCTCCGCAGTTTaGTGTAGCCATGGCTCAAGGGCACCCTCTGGTAATGAGGCGGGG +
Preference number: 5 (lower is better)
Translates to: LHKVLDASVLRCSAV*CSHGSRAPSGNEAG
Trigger: CCCCGCCTCATTACCAGAGGGTGCCCTTGAGCCATGGCTACAGCAAACTGCGGAGCAGCGCAGAACAGATGCATCCAGCACCTTATGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS CCA 90 bp TTTGGGCTTAGGAAAAGCTGCCTGCAGGTATTCTGGCTGCAGAGTTaGAGGGAGGCCCTCAGGCAATGGGTAGCCGTTCTTCCGAGCCAC +
Preference number: 5 (lower is better)
Translates to: FGLRKSCLQVFWLQS*REALRQWVAVLPSH
Trigger: GTGGCTCGGAAGAACGGCTACCCATTGCCTGAGGGCCTCCCTCCAACTCTGCAGCCAGAATACCTGCAGGCAGCTTTTCCTAAGCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS CCA 90 bp CTGCAGGTATTCTGGCTGCAGAGTTGGAGGGAGGCCCTCAGGCAATaGGTAGCCGTTCTTCCGAGCCACAATGAGATGAAACGCAGCACA +
Preference number: 5 (lower is better)
Translates to: LQVFWLQSWREALRQ*VAVLPSHNEMKRST
Trigger: TGTGCTGCGTTTCATCTCATTGTGGCTCGGAAGAACGGCTACCCATTGCCTGAGGGCCTCCCTCCAACTCTGCAGCCAGAATACCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS GCA 90 bp CATCCTTCTTTGCTGGACTACTTTCTGCAGCCTGGGATGGGGCTCTaGTCAGCTGTGGGAGTAACTCGGCCTCCGACACTTGTTCAGACT +
Preference number: 5 (lower is better)
Translates to: HPSLLDYFLQPGMGL*SAVGVTRPPTLVQT
Trigger: AGTCTGAACAAGTGTCGGAGGCCGAGTTACTCCCACAGCTGAGCAGAGCCCCATCCCAGGCTGCAGAAAGTAGTCCAGCAAAGAAGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
CDS-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGTGATGGACAAGGTCTaGGAGGGAGCGCAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPVMDKV*EGAQVV
Trigger: CACCACCTGCGCTCCCTCCAAGACCTTGTCCATCAC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGATGCGGTTTCATGGTaGCCGCAGAAGCTGGCCCAC +
Preference number: 5 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPDAVSW*PQKLAH
Trigger: GTGGGCCAGCTTCTGCGGCAACCATGAAACCGCATC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGATTCTGGCTGCAGAGTaGGAGGGAGGCCCTCAGGCA +
Preference number: 5 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRILAAE*EGGPQA
Trigger: TGCCTGAGGGCCTCCCTCCAACTCTGCAGCCAGAAT...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS GCA 90 bp CTGTTTGGAAGACTGCTTTTGGACTGTTGGATGCGGTTTCATGGTTaGCGCAGAAGCTGGCCCACTTGCAGCAGTGGAAGGCTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: LFGRLLLDCWMRFHG*RRSWPTCSSGRLLV
Trigger: AACCAAGAGCCTTCCACTGCTGCAAGTGGGCCAGCTTCTGCGGCAACCATGAAACCGCATCCAACAGTCCAAAAGCAGTCTTCCAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
CDS CCA 90 bp CTGCTTTTGGACTGTTGGATGCGGTTTCATGGTTGCCGCAGAAGCTaGCCCACTTGCAGCAGTGGAAGGCTCTTGGTTTTCTGTAGCTTG +
Preference number: 5 (lower is better)
Translates to: LLLDCWMRFHGCRRS*PTCSSGRLLVFCSL
Trigger: CAAGCTACAGAAAACCAAGAGCCTTCCACTGCTGCAAGTGGGCCAGCTTCTGCGGCAACCATGAAACCGCATCCAACAGTCCAAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
CDS GCA 90 bp CTCCTTGAGCTGCTGCTGGAGCTCACTGTTCAGCCGAGCCAGCACTaGGTTTGCCTCTTTATTTTTGCGGATAGCAGTTTGAATGGCCTT +
Preference number: 5 (lower is better)
Translates to: LLELLLELTVQPSQH*VCLFIFADSSLNGL
Trigger: AAGGCCATTCAAACTGCTATCCGCAAAAATAAAGAGGCAAACGCAGTGCTGGCTCGGCTGAACAGTGAGCTCCAGCAGCAGCTCAAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
ENST00000470686.1
CDS CCA 90 bp TCTTCTGTTTGGAAGACTGCTTTTGGACTGTTGGATGCGGTTTCATaGTTGCCGCAGAAGCTGGCCCACTTGCAGCAGTGGAAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: SSVWKTAFGLLDAVS*LPQKLAHLQQWKAL
Trigger: AAGAGCCTTCCACTGCTGCAAGTGGGCCAGCTTCTGCGGCAACCATGAAACCGCATCCAACAGTCCAAAAGCAGTCTTCCAAACAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
CDS-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGTGATGGACAAGGTCTaGGAGGGAGCGCAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFVMDKV*EGAQVV
Trigger: CACCACCTGCGCTCCCTCCAAGACCTTGTCCATCAC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS TCA 90 bp TCTGCAGCAGCATCTGAGACCTGCAAGACCCCAAAAGCAGGGTCATaGTGGGTCTTGAGCATTTATGTTAGTGACCGGTCAGGCTCACTT +
Preference number: 5 (lower is better)
Translates to: SAAASETCKTPKAGS*WVLSIYVSDRSGSL
Trigger: AAGTGAGCCTGACCGGTCACTAACATAAATGCTCAAGACCCATCATGACCCTGCTTTTGGGGTCTTGCAGGTCTCAGATGCTGCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCACACGAGGTTGTTGATTaGCCGGCAGTGACTCAGAAT +
Preference number: 5 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPHEVVD*PAVTQN
Trigger: ATTCTGAGTCACTGCCGGCAAATCAACAACCTCGTG...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGGTAACAATCCTGACTaGGTAGCTGGCACACTGGGC +
Preference number: 5 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHGNNPD*VAGTLG
Trigger: GCCCAGTGTGCCAGCTACCAAGTCAGGATTGTTACC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGAGCCAGCACTGCGTTaGCCTCTTTATTTTTGCGGA +
Preference number: 5 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPEPALR*PLYFCG
Trigger: TCCGCAAAAATAAAGAGGCAAACGCAGTGCTGGCTC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCACCCTTCTTCCCCAGTTaGGATAGCTGGGTTCAAACA +
Preference number: 5 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPPFFPS*DSWVQT
Trigger: TGTTTGAACCCAGCTATCCAAACTGGGGAAGAAGGG...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS CCA 90 bp ATGGTTGCCGCAGAAGCTGGCCCACTTGCAGCAGTGGAAGGCTCTTaGTTTTCTGTAGCTTGGTTTTCTGGTCTGAATTTCCTACGAATG +
Preference number: 5 (lower is better)
Translates to: MVAAEAGPLAAVEGS*FSVAWFSGLNFLRM
Trigger: CATTCGTAGGAAATTCAGACCAGAAAACCAAGCTACAGAAAACCAAGAGCCTTCCACTGCTGCAAGTGGGCCAGCTTCTGCGGCAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
CDS CCA 90 bp TTACAGAGAAGGATAGTTTGTCCAGAGCATCATTGTCTCAGTCCCTaGCCATGTCCACAGGTGTCTTCACCCTCCCTCCAATACCTGTTC +
Preference number: 5 (lower is better)
Translates to: LQRRIVCPEHHCLSP*PCPQVSSPSLQYLF
Trigger: GAACAGGTATTGGAGGGAGGGTGAAGACACCTGTGGACATGGCCAGGGACTGAGACAATGATGCTCTGGACAAACTATCCTTCTCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTATTCTGGCTGCAGAGTaGGAGGGAGGCCCTCAGGCA +
Preference number: 5 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVILAAE*EGGPQA
Trigger: TGCCTGAGGGCCTCCCTCCAACTCTGCAGCCAGAAT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGGTAACAATCCTGACTaGGTAGCTGGCACACTGGGC +
Preference number: 5 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFGNNPD*VAGTLG
Trigger: GCCCAGTGTGCCAGCTACCAAGTCAGGATTGTTACC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAAGCAGTGGAAGGCTCTaGGTTTTCTGTAGCTTGGTT +
Preference number: 5 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPSSGRL*VFCSLV
Trigger: AACCAAGCTACAGAAAACCAAGAGCCTTCCACTGCT...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS GCA 90 bp CCACACCTACTGAAAGTGTGTCTGTGGGTGAAGGAGCTAGCCATTTaGCCTGAAGGAAAAGGAGATAACACAGGCAGAGAGGCAAAATTG +
Preference number: 5 (lower is better)
Translates to: PHLLKVCLWVKELAI*PEGKGDNTGREAKL
Trigger: CAATTTTGCCTCTCTGCCTGTGTTATCTCCTTTTCCTTCAGGGCAAATGGCTAGCTCCTTCACCCACAGACACACTTTCAGTAGGTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTGGAATCCTTGGGAGTaGCTGGATCCTCAGACACGT +
Preference number: 5 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFWNPWE*LDPQTR
Trigger: ACGTGTCTGAGGATCCAGCAACTCCCAAGGATTCCA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACAGACTGTTGGAATCCTaGGGAGTTGCTGGATCCTCA +
Preference number: 5 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHRLLES*GVAGSS
Trigger: TGAGGATCCAGCAACTCCCAAGGATTCCAACAGTCT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAACAGTACATCCTTCTTaGCTGGACTACTTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPTVHPS*LDYFLQ
Trigger: CTGCAGAAAGTAGTCCAGCAAAGAAGGATGTACTGT...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACACTGACCTATCAGTGTaGGTAGGATCTCCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHTDLSV*VGSPLA
Trigger: AGCTAGGGGAGATCCTACCAACACTGATAGGTCAGT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTCGAATCTGCTTGCGTaGCTTTTAAAGTCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRSNLLA*LLKSGP
Trigger: AGGGCCAGACTTTAAAAGCAACGCAAGCAGATTCGA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGCTCCACACAATGGGGTaGCATAATCAACTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRLHTMG*HNQLFQ
Trigger: CTGGAACAGTTGATTATGCAACCCCATTGTGTGGAG...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS TCA 90 bp TTGAGCATTTATGTTAGTGACCGGTCAGGCTCACTTGCAGTCAAGTaGCAGGAGCAGGTTTCTGTCCTCAACACCTCCCTCAATTTCACT +
Preference number: 5 (lower is better)
Translates to: LSIYVSDRSGSLAVK*QEQVSVLNTSLNFT
Trigger: AGTGAAATTGAGGGAGGTGTTGAGGACAGAAACCTGCTCCTGTCACTTGACTGCAAGTGAGCCTGACCGGTCACTAACATAAATGCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCAGACTGTTGGAATCCTaGGGAGTTGCTGGATCCTCA +
Preference number: 5 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFRLLES*GVAGSS
Trigger: TGAGGATCCAGCAACTCCCAAGGATTCCAACAGTCT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACTCCTACGAATGGGCTTaGATGGTGGCTGAGAATACA +
Preference number: 5 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHSYEWA*MVAENT
Trigger: TGTATTCTCAGCCACCATCAAAGCCCATTCGTAGGA...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACAGCAGTGGAAGGCTCTaGGTTTTCTGTAGCTTGGTT +
Preference number: 5 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHSSGRL*VFCSLV
Trigger: AACCAAGCTACAGAAAACCAAGAGCCTTCCACTGCT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTTTGGAAGACTGCTTTaGGACTGTTGGATGCGGTTT +
Preference number: 5 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRFGRLL*DCWMRF
Trigger: AAACCGCATCCAACAGTCCAAAAGCAGTCTTCCAAA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCATTTGCGGATAGCAGTTaGAATGGCCTTCTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPFADSS*NGLLLF
Trigger: AAACAGAAGAAGGCCATTCAAACTGCTATCCGCAAA...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCGGTCCCATTTTCAACTaGGGCTTTCAGGAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFGPIFN*GFQEKQ
Trigger: CTGCTTCTCCTGAAAGCCCAAGTTGAAAATGGGACC...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGCTGAATCCCACATATaGCAAACCTATCCAAAACTG +
Preference number: 5 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPAESHI*QTYPKL
Trigger: CAGTTTTGGATAGGTTTGCAATATGTGGGATTCAGC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACAACATGTCCTGTGTATaGAAACCCTGCAATGCCTCC +
Preference number: 5 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHNMSCV*KPCNAS
Trigger: GGAGGCATTGCAGGGTTTCAATACACAGGACATGTT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACAGCATTTCCCAATTGTaGACAGCAGAGCAAGGCTTC +
Preference number: 5 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHSISQL*TAEQGF
Trigger: GAAGCCTTGCTCTGCTGTCAACAATTGGGAAATGCT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS TCA 90 bp CGAGCCAGCACTGCGTTTGCCTCTTTATTTTTGCGGATAGCAGTTTaGATGGCCTTCTTCTGTTTGGAAGACTGCTTTTGGACTGTTGGA +
Preference number: 5 (lower is better)
Translates to: RASTAFASLFLRIAV*MAFFCLEDCFWTVG
Trigger: TCCAACAGTCCAAAAGCAGTCTTCCAAACAGAAGAAGGCCATTCAAACTGCTATCCGCAAAAATAAAGAGGCAAACGCAGTGCTGGCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
CDS-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTTGGAATCCTTGGGAGTaGCTGGATCCTCAGACACGT +
Preference number: 5 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVWNPWE*LDPQTR
Trigger: ACGTGTCTGAGGATCCAGCAACTCCCAAGGATTCCA...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACACAGTACATCCTTCTTaGCTGGACTACTTTCTGCAG +
Preference number: 5 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHTVHPS*LDYFLQ
Trigger: CTGCAGAAAGTAGTCCAGCAAAGAAGGATGTACTGT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTTTGCGGATAGCAGTTaGAATGGCCTTCTTCTGTTT +
Preference number: 5 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRFADSS*NGLLLF
Trigger: AAACAGAAGAAGGCCATTCAAACTGCTATCCGCAAA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCAATGCAATTCGTTCTaGATGAACCTCCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHQCNSF*MNLLEL
Trigger: CAGCTCAAGGAGGTTCATCAAGAACGAATTGCATTG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGCTAGAGAAGCAATTTTaGGCATATAGTGGTAGAGGG +
Preference number: 5 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRLEKQF*AYSGRG
Trigger: CCCTCTACCACTATATGCCAAAAATTGCTTCTCTAG...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGAAGCTCTCAGCTCTATaGAAATCAAAGGCTGAATCC +
Preference number: 5 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRKLSAL*KSKAES
Trigger: GGATTCAGCCTTTGATTTCAATAGAGCTGAGAGCTT...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCAGGCAGGTCTAACTTaGGAGTCGTTTTATGGAAGA +
Preference number: 5 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHQAGLT*ESFYGR
Trigger: TCTTCCATAAAACGACTCCAAAGTTAGACCTGCCTG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCACTTTCTATGGATTTTTaGGGCCAGGAACTGTTGTTT +
Preference number: 5 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPLSMDF*GQELLF
Trigger: AAACAACAGTTCCTGGCCCAAAAAATCCATAGAAAG...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCACCTAATGATCCCTACTaGTCAATAATATGGGAAGCT +
Preference number: 5 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPPNDPY*SIIWEA
Trigger: AGCTTCCCATATTATTGACAAGTAGGGATCATTAGG...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTCGAATCTGCTTGCGTaGCTTTTAAAGTCTGGCCCT +
Preference number: 5 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFSNLLA*LLKSGP
Trigger: AGGGCCAGACTTTAAAAGCAACGCAAGCAGATTCGA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCAACATGTCCTGTGTATaGAAACCCTGCAATGCCTCC +
Preference number: 5 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFNMSCV*KPCNAS
Trigger: GGAGGCATTGCAGGGTTTCAATACACAGGACATGTT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS GCA 90 bp ACAAATTCACAGAACACGCATAACCAGAGTGACCACGCATCCTACTaGGCCCATTACAGTCTCCATTTAAAACTGTCTGTCCAGCATAAG +
Preference number: 5 (lower is better)
Translates to: TNSQNTHNQSDHASY*AHYSLHLKLSVQHK
Trigger: CTTATGCTGGACAGACAGTTTTAAATGGAGACTGTAATGGGCGCAGTAGGATGCGTGGTCACTCTGGTTATGCGTGTTCTGTGAATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS-3UTR CAA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGCAATGTAAAACTGTGTaGGACCAAAATAACCAACCC +
Preference number: 5 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRQCKTV*DQNNQP
Trigger: GGGTTGGTTATTTTGGTCCAACACAGTTTTACATTG...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTTGGTGAAGAAGTTCTaGGCCACAGAACCTGAAATG +
Preference number: 5 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFLVKKF*ATEPEM
Trigger: CATTTCAGGTTCTGTGGCCAAGAACTTCTTCACCAA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCACGAGGTTGTTGATTaGCCGGCAGTGACTCAGAAT +
Preference number: 5 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVHEVVD*PAVTQN
Trigger: ATTCTGAGTCACTGCCGGCAAATCAACAACCTCGTG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCATGGCCTTCTTCTGTTaGGAAGACTGCTTTTGGACT +
Preference number: 5 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFMAFFC*EDCFWT
Trigger: AGTCCAAAAGCAGTCTTCCAAACAGAAGAAGGCCAT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGAGCCAGCACTGCGTTaGCCTCTTTATTTTTGCGGA +
Preference number: 5 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVEPALR*PLYFCG
Trigger: TCCGCAAAAATAAAGAGGCAAACGCAGTGCTGGCTC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCACATATGGATTATATTTaGCTGCTCACAGCTTTTGAC +
Preference number: 5 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPHMDYI*LLTAFD
Trigger: GTCAAAAGCTGTGAGCAGCAAAATATAATCCATATG...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAGCAGCATCTAATACCTaGCAGAAGTACTTAAGAATA +
Preference number: 5 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPAASNT*QKYLRI
Trigger: TATTCTTAAGTACTTCTGCAAGGTATTAGATGCTGC...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAAGACCCAGTAAGTCTTaGACATTCAATAGAAAACGA +
Preference number: 5 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPRPSKS*TFNRKR
Trigger: TCGTTTTCTATTGAATGTCAAAGACTTACTGGGTCT...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCCCAGCTCTGACATCCTATTCTCCAGTGACAGTAAGATGGGCACAGCTTCCAACTGGCTTCTGCAATTaGAGCTTACTGTTTTACATT +
Preference number: 5 (lower is better)
Translates to: CPALTSYSPVTVRWAQLPTGFCN*SLLFYI
Trigger: AATGTAAAACAGTAAGCTCAAATTGCAGAAGCCAGT...TGGAAGCTGTGCCCATCTTACTGTCACTGGAGAATAGGATGTCAGAGCTGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGGAAACTCAGGGGAATTaGATTGTCCAATGCAAGTTT +
Preference number: 5 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRETQGN*IVQCKF
Trigger: AAACTTGCATTGGACAATCAAATTCCCCTGAGTTTC...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCAAACTGTGGTTACAGTaGAGTCCACCCAAGAAGGTA +
Preference number: 5 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFKLWLQ*SPPKKV
Trigger: TACCTTCTTGGGTGGACTCAACTGTAACCACAGTTT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTACTGACCTATCAGTGTaGGTAGGATCTCCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVTDLSV*VGSPLA
Trigger: AGCTAGGGGAGATCCTACCAACACTGATAGGTCAGT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGATACCCACATTCAAATaGCCATCAATGACTGACCTA +
Preference number: 5 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRIPTFK*PSMTDL
Trigger: TAGGTCAGTCATTGATGGCAATTTGAATGTGGGTAT...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACTTGCTTCTGGCTCACTaGAACATCTTATTTGTGCTG +
Preference number: 5 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHLLLAH*NILFVL
Trigger: CAGCACAAATAAGATGTTCAAGTGAGCCAGAAGCAA...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS CCA 90 bp CATGTCCACAGGTGTCTTCACCCTCCCTCCAATACCTGTTCCAGCTaGTTAGATAAATATAATGGAAGTTCTGCATGTATCCATTCTGTG +
Preference number: 5 (lower is better)
Translates to: HVHRCLHPPSNTCSS*LDKYNGSSACIHSV
Trigger: CACAGAATGGATACATGCAGAACTTCCATTATATTTATCTAACCAGCTGGAACAGGTATTGGAGGGAGGGTGAAGACACCTGTGGACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCATGGAAAGCTTTGATTaGGTGAAGAAGTTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFMESFD*VKKFLA
Trigger: GGCCAAGAACTTCTTCACCAAATCAAAGCTTTCCAT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTTCCTACGAATGGGCTTaGATGGTGGCTGAGAATACA +
Preference number: 5 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVSYEWA*MVAENT
Trigger: TGTATTCTCAGCCACCATCAAAGCCCATTCGTAGGA...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGTTGGTTTTCTGTAGCTaGGTTTTCTGGTCTGAATTT +
Preference number: 5 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRLVFCS*VFWSEF
Trigger: AAATTCAGACCAGAAAACCAAGCTACAGAAAACCAA...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp ATTTCTTGCCATTGGTCTCTCAAAGTGGTGTTAACGCTGGCATGCCCTGTGAGGCATATGGATTATATTTaGCTGCTCACAGCTTTTGAC +
Preference number: 5 (lower is better)
Translates to: ISCHWSLKVVLTLACPVRHMDYI*LLTAFD
Trigger: GTCAAAAGCTGTGAGCAGCAAAATATAATCCATATG...CCTCACAGGGCATGCCAGCGTTAACACCACTTTGAGAGACCAATGGCAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCAAGAGACAGCATTTCTaGCCATTGGTCTCTCAAAGT +
Preference number: 5 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFKRQHF*PLVSQS
Trigger: ACTTTGAGAGACCAATGGCAAGAAATGCTGTCTCTT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACTCTGCCATTAAGCTATaGATAAAGCTTGCCAATGGA +
Preference number: 5 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHSAIKL*IKLANG
Trigger: TCCATTGGCAAGCTTTATCAATAGCTTAATGGCAGA...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGTAGTGTGTCATTACTaGTGTGTTATGCACACACAT +
Preference number: 5 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHVVCHY*CVMHTH
Trigger: ATGTGTGTGCATAACACACAAGTAATGACACACTAC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTTTGGGCCAGGAACTGTaGTTTCTTAGGGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVLGQEL*FLRALV
Trigger: AACCAAAGCCCTAAGAAACAACAGTTCCTGGCCCAA...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACCTTTCTATGGATTTTTaGGGCCAGGAACTGTTGTTT +
Preference number: 5 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHLSMDF*GQELLF
Trigger: AAACAACAGTTCCTGGCCCAAAAAATCCATAGAAAG...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTATGAGCATTTCCCAATaGTTGACAGCAGAGCAAGGC +
Preference number: 5 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVMSISQ*LTAEQG
Trigger: GCCTTGCTCTGCTGTCAACAATTGGGAAATGCTCAT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCTCCACACAATGGGGTaGCATAATCAACTGTTCCAG +
Preference number: 5 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVLHTMG*HNQLFQ
Trigger: CTGGAACAGTTGATTATGCAACCCCATTGTGTGGAG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS TCA 90 bp ATGCAGCTCAGCTGGGTTCCCAAATCGTATCTCACCATCATTCTTTaGCATCATAAAGCGAGGCAGAGGCAATTCACATTTAATACTCTC +
Preference number: 5 (lower is better)
Translates to: MQLSWVPKSYLTIIL*HHKARQRQFTFNTL
Trigger: GAGAGTATTAAATGTGAATTGCCTCTGCCTCGCTTTATGATGTCAAAGAATGATGGTGAGATACGATTTGGGAACCCAGCTGAGCTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000481792.1
CDS TCA 90 bp TTCTGTAGCTTGGTTTTCTGGTCTGAATTTCCTACGAATGGGCTTTaGTGGTGGCTGAGAATACAGTACATCCTTCTTTGCTGGACTACT +
Preference number: 5 (lower is better)
Translates to: FCSLVFWSEFPTNGL*WWLRIQYILLCWTT
Trigger: AGTAGTCCAGCAAAGAAGGATGTACTGTATTCTCAGCCACCATCAAAGCCCATTCGTAGGAAATTCAGACCAGAAAACCAAGCTACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
CDS CCA 90 bp TTTGTCCCTGATAGGGATTCTTCACCTTCCAGGCTTAACAGGGGCTaGAAGATGGTCAAAGTTCTCGGTGAATGTGATGAACAAAATATA +
Preference number: 5 (lower is better)
Translates to: FVPDRDSSPSRLNRG*KMVKVLGECDEQNI
Trigger: TATATTTTGTTCATCACATTCACCGAGAACTTTGACCATCTTCCAGCCCCTGTTAAGCCTGGAAGGTGAAGAATCCCTATCAGGGACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTTTTGGAAGACTGCTTTaGGACTGTTGGATGCGGTTT +
Preference number: 5 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVFGRLL*DCWMRF
Trigger: AAACCGCATCCAACAGTCCAAAAGCAGTCTTCCAAA...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACGCAGCATCTAATACCTaGCAGAAGTACTTAAGAATA +
Preference number: 5 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHAASNT*QKYLRI
Trigger: TATTCTTAAGTACTTCTGCAAGGTATTAGATGCTGC...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TGCATTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACAGACCCAGTAAGTCTTaGACATTCAATAGAAAACGA +
Preference number: 5 (lower is better)
Translates to: CISPYKQAKQGGSQSNTHRPSKS*TFNRKR
Trigger: TCGTTTTCTATTGAATGTCAAAGACTTACTGGGTCT...GTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCAGCATTTCTTGCCATaGGTCTCTCAAAGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVQHFLP*VSQSGV
Trigger: AACACCACTTTGAGAGACCAATGGCAAGAAATGCTG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTTTGTTTCTTAGGGCTTaGGTTTCCCCACATGCAAAC +
Preference number: 5 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVLFLRA*VSPHAN
Trigger: GTTTGCATGTGGGGAAACCAAAGCCCTAAGAAACAA...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCTTGGTTTTCTGTAGCTaGGTTTTCTGGTCTGAATTT +
Preference number: 5 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFLVFCS*VFWSEF
Trigger: AAATTCAGACCAGAAAACCAAGCTACAGAAAACCAA...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTGCTGAATCCCACATATaGCAAACCTATCCAAAACTG +
Preference number: 5 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVAESHI*QTYPKL
Trigger: CAGTTTTGGATAGGTTTGCAATATGTGGGATTCAGC...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTATTGGGCCAGGAACTGTaGTTTCTTAGGGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: AGLTLESFYGRGIMVISVLGQEL*FLRALV
Trigger: AACCAAAGCCCTAAGAAACAACAGTTCCTGGCCCAA...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp TTTCTCCTTACAAACAAGCGAAGCAGGGTGGCTCACAGAGTAATACCCACATTCAATAACACAACTCAGTaGATCCAATCTCCACACAAT +
Preference number: 5 (lower is better)
Translates to: FLLTNKRSRVAHRVIPTFNNTTQ*IQSPHN
Trigger: ATTGTGTGGAGATTGGATCAACTGAGTTGTGTTATT...GAATGTGGGTATTACTCTGTGAGCCACCCTGCTTCGCTTGTTTGTAAGGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTCAATGTAAAACTGTGTaGGACCAAAATAACCAACCC +
Preference number: 5 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVQCKTV*DQNNQP
Trigger: GGGTTGGTTATTTTGGTCCAACACAGTTTTACATTG...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTATTGGTGAAGAAGTTCTaGGCCACAGAACCTGAAATG +
Preference number: 5 (lower is better)
Translates to: AGLTLESFYGRGIMVISVLVKKF*ATEPEM
Trigger: CATTTCAGGTTCTGTGGCCAAGAACTTCTTCACCAA...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAATGGCCTTCTTCTGTTaGGAAGACTGCTTTTGGACT +
Preference number: 5 (lower is better)
Translates to: AGLTLESFYGRGIMVISVMAFFC*EDCFWT
Trigger: AGTCCAAAAGCAGTCTTCCAAACAGAAGAAGGCCAT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACAATGCAATTCGTTCTaGATGAACCTCCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: AGLTLESFYGRGIMVISVQCNSF*MNLLEL
Trigger: CAGCTCAAGGAGGTTCATCAAGAACGAATTGCATTG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAAGTGACCGGACGAAGTaGTTCCAATTGGTTTTCCAA +
Preference number: 5 (lower is better)
Translates to: AGLTLESFYGRGIMVISVSDRTK*FQLVFQ
Trigger: TTGGAAAACCAATTGGAACAACTTCGTCCGGTCACT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTAAGTTAAACAGCTCATaGCCAAAACCTCCACTTTAC +
Preference number: 5 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVKLNSS*PKPPLY
Trigger: GTAAAGTGGAGGTTTTGGCAATGAGCTGTTTAACTT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTATCAGCCTTTCATATTaGATGGGTGGTTTCCAAACT +
Preference number: 5 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVISLSY*MGGFQT
Trigger: AGTTTGGAAACCACCCATCAAATATGAAAGGCTGAT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTATACCCACATTCAAATaGCCATCAATGACTGACCTA +
Preference number: 5 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVIPTFK*PSMTDL
Trigger: TAGGTCAGTCATTGATGGCAATTTGAATGTGGGTAT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS CCA 90 bp TTGATAGTACTTTTCAAAGCTTGTTTGTCATCACTAGTTACATCCTaGTTAGGGACAGGAAGGTCAGCCATGTCTTTAACAGATGTCTTC +
Preference number: 5 (lower is better)
Translates to: LIVLFKACLSSLVTS*LGTGRSAMSLTDVF
Trigger: GAAGACATCTGTTAAAGACATGGCTGACCTTCCTGTCCCTAACCAGGATGTAACTAGTGATGACAAACAAGCTTTGAAAAGTACTATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACTAGAGAAGCAATTTTaGGCATATAGTGGTAGAGGG +
Preference number: 5 (lower is better)
Translates to: AGLTLESFYGRGIMVISVLEKQF*AYSGRG
Trigger: CCCTCTACCACTATATGCCAAAAATTGCTTCTCTAG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp CTGCCTCCTCTCCCAATCATGCCCAAGCACTTGTTTAATATTTGTAAAGCAGTTAATAACACAACTCAGTaGATCCAATCTCCACACAAT +
Preference number: 5 (lower is better)
Translates to: LPPLPIMPKHLFNICKAVNNTTQ*IQSPHN
Trigger: ATTGTGTGGAGATTGGATCAACTGAGTTGTGTTATT...AACTGCTTTACAAATATTAAACAAGTGCTTGGGCATGATTGGGAGAGGAGGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAAAGTTAAACAGCTCATaGCCAAAACCTCCACTTTAC +
Preference number: 5 (lower is better)
Translates to: AGLTLESFYGRGIMVISVKLNSS*PKPPLY
Trigger: GTAAAGTGGAGGTTTTGGCAATGAGCTGTTTAACTT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTAACTGGCTTCTGCAATTaGAGCTTACTGTTTTACATT +
Preference number: 5 (lower is better)
Translates to: AGLTLESFYGRGIMVISVTGFCN*SLLFYI
Trigger: AATGTAAAACAGTAAGCTCAAATTGCAGAAGCCAGT...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS-3UTR CAA 90 bp GCAGGTCTAACTTTGGAGTCGTTTTATGGAAGAGGTATAATGGTGATTTCAGTACTAGTCTTTCCTGGATaGAATTTACCAAAAGCCAAA +
Preference number: 5 (lower is better)
Translates to: AGLTLESFYGRGIMVISVLVFPG*NLPKAK
Trigger: TTTGGCTTTTGGTAAATTCAATCCAGGAAAGACTAG...TACTGAAATCACCATTATACCTCTTCCATAAAACGACTCCAAAGTTAGACCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS TCA 90 bp AAAGAAGCCAGTCACAAAAGACCACGTTTCATTATTCCATTTATGTaGAATGACAAGAATATGCAAAGCCATGGAGACAGAAAGGAGATT +
Preference number: 5 (lower is better)
Translates to: KEASHKRPRFIIPFM*NDKNMQSHGDRKEI
Trigger: AATCTCCTTTCTGTCTCCATGGCTTTGCATATTCTTGTCATTTCACATAAATGGAATAATGAAACGTGGTCTTTTGTGACTGGCTTCTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS GCA 72 bp TGTGATCTGGTGCAGCGTCTCGGCGGGCAGCTGCGATaGCCGAAACAGGTCAGCCACGGGGCCGGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: CDLVQRLGGQLR*PKQVSHGAGGR
Trigger: GCGGCCGCCGGCCCCGTGGCTGACCTGTTTCGGGCATCGCAGCTGCCCGCCGAGACGCTGCACCAGATCACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS GCA 72 bp AGTTCTGTGATCTGGTGCAGCGTCTCGGCGGGCAGCTaGGATGCCCGAAACAGGTCAGCCACGGGGCCGGCG +
Preference number: 6 (lower is better)
Translates to: SSVIWCSVSAGS*DARNRSATGPA
Trigger: CGCCGGCCCCGTGGCTGACCTGTTTCGGGCATCGCAGCTGCCCGCCGAGACGCTGCACCAGATCACAGAACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000481792.1
CDS GCA 72 bp TTGCTGGACTACTTTCTGCAGCCTGGGATGGGGCTCTaGTCAGCTGTGGGAGTAACTCGGCCTCCGACACTT +
Preference number: 6 (lower is better)
Translates to: LLDYFLQPGMGL*SAVGVTRPPTL
Trigger: AAGTGTCGGAGGCCGAGTTACTCCCACAGCTGAGCAGAGCCCCATCCCAGGCTGCAGAAAGTAGTCCAGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
CDS GCA 72 bp GTGCTGGATGCATCTGTTCTGCGCTGCTCCGCAGTTTaGTGTAGCCATGGCTCAAGGGCACCCTCTGGTAAT +
Preference number: 6 (lower is better)
Translates to: VLDASVLRCSAV*CSHGSRAPSGN
Trigger: ATTACCAGAGGGTGCCCTTGAGCCATGGCTACAGCAAACTGCGGAGCAGCGCAGAACAGATGCATCCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS CAA 72 bp CCTCCGACACTTGTTCAGACTGTGATGGACAAGGTCTaGGAGGGAGCGCAGGTGGTGGGGGTAACAATCCTG +
Preference number: 6 (lower is better)
Translates to: PPTLVQTVMDKV*EGAQVVGVTIL
Trigger: CAGGATTGTTACCCCCACCACCTGCGCTCCCTCCAAGACCTTGTCCATCACAGTCTGAACAAGTGTCGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
CDS TCA 72 bp CCTCAGGCAATGGGTAGCCGTTCTTCCGAGCCACAATaGGATGAAACGCAGCACAGAACTCAGGCAGGGTCA +
Preference number: 6 (lower is better)
Translates to: PQAMGSRSSEPQ*DETQHRTQAGS
Trigger: TGACCCTGCCTGAGTTCTGTGCTGCGTTTCATCTCATTGTGGCTCGGAAGAACGGCTACCCATTGCCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS GCA 72 bp AGACTGCTTTTGGACTGTTGGATGCGGTTTCATGGTTaGCGCAGAAGCTGGCCCACTTGCAGCAGTGGAAGG +
Preference number: 6 (lower is better)
Translates to: RLLLDCWMRFHG*RRSWPTCSSGR
Trigger: CCTTCCACTGCTGCAAGTGGGCCAGCTTCTGCGGCAACCATGAAACCGCATCCAACAGTCCAAAAGCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
CDS CCA 72 bp TTCTGGCTGCAGAGTTGGAGGGAGGCCCTCAGGCAATaGGTAGCCGTTCTTCCGAGCCACAATGAGATGAAA +
Preference number: 6 (lower is better)
Translates to: FWLQSWREALRQ*VAVLPSHNEMK
Trigger: TTTCATCTCATTGTGGCTCGGAAGAACGGCTACCCATTGCCTGAGGGCCTCCCTCCAACTCTGCAGCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS CCA 72 bp GACTGTTGGATGCGGTTTCATGGTTGCCGCAGAAGCTaGCCCACTTGCAGCAGTGGAAGGCTCTTGGTTTTC +
Preference number: 6 (lower is better)
Translates to: DCWMRFHGCRRS*PTCSSGRLLVF
Trigger: GAAAACCAAGAGCCTTCCACTGCTGCAAGTGGGCCAGCTTCTGCGGCAACCATGAAACCGCATCCAACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
CDS CCA 72 bp TGGAAGACTGCTTTTGGACTGTTGGATGCGGTTTCATaGTTGCCGCAGAAGCTGGCCCACTTGCAGCAGTGG +
Preference number: 6 (lower is better)
Translates to: WKTAFGLLDAVS*LPQKLAHLQQW
Trigger: CCACTGCTGCAAGTGGGCCAGCTTCTGCGGCAACCATGAAACCGCATCCAACAGTCCAAAAGCAGTCTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
CDS GCA 72 bp CTGCCTAGCTTCATAAGGTGCTGGATGCATCTGTTCTaGGCTGCTCCGCAGTTTGCTGTAGCCATGGCTCAA +
Preference number: 6 (lower is better)
Translates to: LPSFIRCWMHLF*AAPQFAVAMAQ
Trigger: TTGAGCCATGGCTACAGCAAACTGCGGAGCAGCGCAGAACAGATGCATCCAGCACCTTATGAAGCTAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS GCA 72 bp ATGCGGTTTCATGGTTGCCGCAGAAGCTGGCCCACTTaGAGCAGTGGAAGGCTCTTGGTTTTCTGTAGCTTG +
Preference number: 6 (lower is better)
Translates to: MRFHGCRRSWPT*SSGRLLVFCSL
Trigger: CAAGCTACAGAAAACCAAGAGCCTTCCACTGCTGCAAGTGGGCCAGCTTCTGCGGCAACCATGAAACCGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
CDS CAA 90 bp TCTGTTTGGAAGACTGCTTTTGGACTGTTGGATGCGGTTTCATGGTaGCCGCAGAAGCTGGCCCACTTGCAGCAGTGGAAGGCTCTTGGT +
Preference number: 6 (lower is better)
Translates to: SVWKTAFGLLDAVSW*PQKLAHLQQWKALG
Trigger: ACCAAGAGCCTTCCACTGCTGCAAGTGGGCCAGCTTCTGCGGCAACCATGAAACCGCATCCAACAGTCCAAAAGCAGTCTTCCAAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
CDS TCA 72 bp TATGTTAGTGACCGGTCAGGCTCACTTGCAGTCAAGTaGCAGGAGCAGGTTTCTGTCCTCAACACCTCCCTC +
Preference number: 6 (lower is better)
Translates to: YVSDRSGSLAVK*QEQVSVLNTSL
Trigger: GAGGGAGGTGTTGAGGACAGAAACCTGCTCCTGTCACTTGACTGCAAGTGAGCCTGACCGGTCACTAACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS GCA 72 bp AGAATACAGTACATCCTTCTTTGCTGGACTACTTTCTaGAGCCTGGGATGGGGCTCTGCTCAGCTGTGGGAG +
Preference number: 6 (lower is better)
Translates to: RIQYILLCWTTF*SLGWGSAQLWE
Trigger: CTCCCACAGCTGAGCAGAGCCCCATCCCAGGCTGCAGAAAGTAGTCCAGCAAAGAAGGATGTACTGTATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
CDS GCA 72 bp CTGCTGCTGGAGCTCACTGTTCAGCCGAGCCAGCACTaGGTTTGCCTCTTTATTTTTGCGGATAGCAGTTTG +
Preference number: 6 (lower is better)
Translates to: LLLELTVQPSQH*VCLFIFADSSL
Trigger: CAAACTGCTATCCGCAAAAATAAAGAGGCAAACGCAGTGCTGGCTCGGCTGAACAGTGAGCTCCAGCAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
ENST00000470686.1
CDS CCA 72 bp AGGATAGTTTGTCCAGAGCATCATTGTCTCAGTCCCTaGCCATGTCCACAGGTGTCTTCACCCTCCCTCCAA +
Preference number: 6 (lower is better)
Translates to: RIVCPEHHCLSP*PCPQVSSPSLQ
Trigger: TTGGAGGGAGGGTGAAGACACCTGTGGACATGGCCAGGGACTGAGACAATGATGCTCTGGACAAACTATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS CAA 90 bp CATGGTTGCCGCAGAAGCTGGCCCACTTGCAGCAGTGGAAGGCTCTaGGTTTTCTGTAGCTTGGTTTTCTGGTCTGAATTTCCTACGAAT +
Preference number: 6 (lower is better)
Translates to: HGCRRSWPTCSSGRL*VFCSLVFWSEFPTN
Trigger: ATTCGTAGGAAATTCAGACCAGAAAACCAAGCTACAGAAAACCAAGAGCCTTCCACTGCTGCAAGTGGGCCAGCTTCTGCGGCAACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
CDS TCA 72 bp AAGAGCTTGGGTCTGGCTGAAGGGATCGGAACTGATTaGCATAGTACTCGCGCTGTTCTTCTGTTATCCTCC +
Preference number: 6 (lower is better)
Translates to: KSLGLAEGIGTD*HSTRAVLLLSS
Trigger: GGAGGATAACAGAAGAACAGCGCGAGTACTATGTCAATCAGTTCCGATCCCTTCAGCCAGACCCAAGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS TCA 72 bp GCATCTGAGACCTGCAAGACCCCAAAAGCAGGGTCATaGTGGGTCTTGAGCATTTATGTTAGTGACCGGTCA +
Preference number: 6 (lower is better)
Translates to: ASETCKTPKAGS*WVLSIYVSDRS
Trigger: TGACCGGTCACTAACATAAATGCTCAAGACCCATCATGACCCTGCTTTTGGGGTCTTGCAGGTCTCAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS GCA 72 bp GTTCTTCTGTTATCCTCCAGGGTTCGTCGGGGTAACTaGTGTTATCCTGTAGTTCCCTCTCCACTGAAAAGG +
Preference number: 6 (lower is better)
Translates to: VLLLSSRVRRGN*CYPVVPSPLKR
Trigger: CCTTTTCAGTGGAGAGGGAACTACAGGATAACAGCAGTTACCCCGACGAACCCTGGAGGATAACAGAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8
CDS GCA 72 bp TTCTTCTGTTTGGAAGACTGCTTTTGGACTGTTGGATaGGGTTTCATGGTTGCCGCAGAAGCTGGCCCACTT +
Preference number: 6 (lower is better)
Translates to: FFCLEDCFWTVG*GFMVAAEAGPL
Trigger: AAGTGGGCCAGCTTCTGCGGCAACCATGAAACCGCATCCAACAGTCCAAAAGCAGTCTTCCAAACAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
CDS GCA 72 bp CTGAAAGTGTGTCTGTGGGTGAAGGAGCTAGCCATTTaGCCTGAAGGAAAAGGAGATAACACAGGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: LKVCLWVKELAI*PEGKGDNTGRE
Trigger: CTCTCTGCCTGTGTTATCTCCTTTTCCTTCAGGGCAAATGGCTAGCTCCTTCACCCACAGACACACTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS CAA 90 bp CAAAGCCAAAGTTTTACAGAGAAGGATAGTTTGTCCAGAGCATCATaGTCTCAGTCCCTGGCCATGTCCACAGGTGTCTTCACCCTCCCT +
Preference number: 6 (lower is better)
Translates to: QSQSFTEKDSLSRAS*SQSLAMSTGVFTLP
Trigger: AGGGAGGGTGAAGACACCTGTGGACATGGCCAGGGACTGAGACAATGATGCTCTGGACAAACTATCCTTCTCTGTAAAACTTTGGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS GCA 72 bp GTAAAACTGTGTTGGACCAAAATAACCAACCCGCTTTaGACCACACAGTTCTGTGATCTGGTGCAGCGTCTC +
Preference number: 6 (lower is better)
Translates to: VKLCWTKITNPL*TTQFCDLVQRL
Trigger: GAGACGCTGCACCAGATCACAGAACTGTGTGGTGCAAAGCGGGTTGGTTATTTTGGTCCAACACAGTTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000481792.1
CDS GCA 72 bp CAGAACACGCATAACCAGAGTGACCACGCATCCTACTaGGCCCATTACAGTCTCCATTTAAAACTGTCTGTC +
Preference number: 6 (lower is better)
Translates to: QNTHNQSDHASY*AHYSLHLKLSV
Trigger: GACAGACAGTTTTAAATGGAGACTGTAATGGGCGCAGTAGGATGCGTGGTCACTCTGGTTATGCGTGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS CAA 90 bp GAGGGCTGCAGAGATTCAGAATGGGACTTTGGCTTCAAAGACAAGTaGCTAACATCTCCCACAGAACCTGCTGCTTTTCATTCTACAACG +
Preference number: 6 (lower is better)
Translates to: EGCRDSEWDFGFKDK*LTSPTEPAAFHSTT
Trigger: CGTTGTAGAATGAAAAGCAGCAGGTTCTGTGGGAGATGTTAGCAACTTGTCTTTGAAGCCAAAGTCCCATTCTGAATCTCTGCAGCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS CCA 72 bp GATAGGGATTCTTCACCTTCCAGGCTTAACAGGGGCTaGAAGATGGTCAAAGTTCTCGGTGAATGTGATGAA +
Preference number: 6 (lower is better)
Translates to: DRDSSPSRLNRG*KMVKVLGECDE
Trigger: TTCATCACATTCACCGAGAACTTTGACCATCTTCCAGCCCCTGTTAAGCCTGGAAGGTGAAGAATCCCTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS CAA 72 bp AGTTTTACAGAGAAGGATAGTTTGTCCAGAGCATCATaGTCTCAGTCCCTGGCCATGTCCACAGGTGTCTTC +
Preference number: 6 (lower is better)
Translates to: SFTEKDSLSRAS*SQSLAMSTGVF
Trigger: GAAGACACCTGTGGACATGGCCAGGGACTGAGACAATGATGCTCTGGACAAACTATCCTTCTCTGTAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS TCA 72 bp GGTCTGAATTTCCTACGAATGGGCTTTGATGGTGGCTaGGAATACAGTACATCCTTCTTTGCTGGACTACTT +
Preference number: 6 (lower is better)
Translates to: GLNFLRMGFDGG*EYSTSFFAGLL
Trigger: AAGTAGTCCAGCAAAGAAGGATGTACTGTATTCTCAGCCACCATCAAAGCCCATTCGTAGGAAATTCAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000469714.1
CDS GCA 72 bp GAACCCTCATACGTTGCCAACGGGAACATAAAATGGTaGAGCCACTATGAAAAGTGTGGTAGTTCTTCGAAA +
Preference number: 6 (lower is better)
Translates to: EPSYVANGNIKW*SHYEKCGSSSK
Trigger: TTTCGAAGAACTACCACACTTTTCATAGTGGCTGCACCATTTTATGTTCCCGTTGGCAACGTATGAGGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS TCA 72 bp AGCTGGGTTCCCAAATCGTATCTCACCATCATTCTTTaGCATCATAAAGCGAGGCAGAGGCAATTCACATTT +
Preference number: 6 (lower is better)
Translates to: SWVPKSYLTIIL*HHKARQRQFTF
Trigger: AAATGTGAATTGCCTCTGCCTCGCTTTATGATGTCAAAGAATGATGGTGAGATACGATTTGGGAACCCAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000303843.7
ENST00000357277.8
ENST00000481792.1
CDS TCA 72 bp GGCCCTGCTACATGCGGTTTCATGGTCAGAATCAAATaGACACATCTGAACAAACTGTTTACCTGTTTATCC +
Preference number: 6 (lower is better)
Translates to: GPATCGFMVRIK*THLNKLFTCLS
Trigger: GGATAAACAGGTAAACAGTTTGTTCAGATGTGTTCATTTGATTCTGACCATGAAACCGCATGTAGCAGGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481792.1
CDS TCA 72 bp GTAGTTCTTCGAAATATTAAAGACAGAGTTACCACATaGCCTAGCAATTCCACTCCTAGGTACAGACCCAAG +
Preference number: 6 (lower is better)
Translates to: VVLRNIKDRVTT*PSNSTPRYRPK
Trigger: CTTGGGTCTGTACCTAGGAGTGGAATTGCTAGGTCATGTGGTAACTCTGTCTTTAATATTTCGAAGAACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS TCA 72 bp AATATAATGGAAGTTCTGCATGTATCCATTCTGTGCTaGGGCGACCAACAACAGAAACTCTTTACGGAGATT +
Preference number: 6 (lower is better)
Translates to: NIMEVLHVSILC*GDQQQKLFTEI
Trigger: AATCTCCGTAAAGAGTTTCTGTTGTTGGTCGCCTCAGCACAGAATGGATACATGCAGAACTTCCATTATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS CCA 72 bp TGCACTCGTGTATGTGCATGGACCAGCATATATCTGTaGCTCTTGAGAAAAATACAGAACGTTTTAATACCA +
Preference number: 6 (lower is better)
Translates to: CTRVCAWTSIYL*LLRKIQNVLIP
Trigger: TGGTATTAAAACGTTCTGTATTTTTCTCAAGAGCCACAGATATATGCTGGTCCATGCACATACACGAGTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470686.1
CDS CAA 72 bp TCTTCTCCATCCGATTCAAGTCACGAGGTTGTTGATTaGCCGGCAGTGACTCAGAATAAGAATCAAATAATT +
Preference number: 6 (lower is better)
Translates to: SSPSDSSHEVVD*PAVTQNKNQII
Trigger: AATTATTTGATTCTTATTCTGAGTCACTGCCGGCAAATCAACAACCTCGTGACTTGAATCGGATGGAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000303843.7
ENST00000357277.8