RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for REPS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000135597

Ensembl transcript IDs: ENST00000258062.9, ENST00000367663.8, ENST00000409812.6, ENST00000414243.1, ENST00000415951.6, ENST00000431346.6, ENST00000445570.5, ENST00000450536.7, ENST00000483468.5, ENST00000484164.6, ENST00000492787.6, ENST00000526022.1, ENST00000529423.1, ENST00000529597.5, ENST00000530255.1, ENST00000530370.1, ENST00000530575.1, ENST00000531675.1, ENST00000626459.2

Found 705 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGCTGATCCCCAACATCTGATGCAGTGTTCCAACCTAGCCTCCTaGTGGAACACTGTGTCAACCCTGCCTCCCTCCTGTGGGTTCTGC +
Preference number: 1 (lower is better)
Translates to: LADPQHLMQCSNLAS*WNTVSTLPPSCGFC
Trigger: GCAGAACCCACAGGAGGGAGGCAGGGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAGATGTTGGGGATCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
3UTR CCA 90 bp CCAGGAGCCTGTGAGGGCTGTGGTCTTGGAGGCACTGCAGGAGGATaGGCAACAACTCCAGCCTGTTGTTGTCCTGTGGTGACTGTAAAG +
Preference number: 1 (lower is better)
Translates to: PGACEGCGLGGTAGG*ATTPACCCPVVTVK
Trigger: CTTTACAGTCACCACAGGACAACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGACCACAGCCCTCACAGGCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR CCA 90 bp GCTGATCCCCAACATCTGATGCAGTGTTCCAACCTAGCCTCCTGCTaGAACACTGTGTCAACCCTGCCTCCCTCCTGTGGGTTCTGCTCT +
Preference number: 1 (lower is better)
Translates to: ADPQHLMQCSNLASC*NTVSTLPPSCGFCS
Trigger: AGAGCAGAACCCACAGGAGGGAGGCAGGGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAGATGTTGGGGATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
3UTR GCA 90 bp TCAGCTCAGGCCATGTCTGGTTTAGTGATGGCATCGATGGTGACTTaGTTGGAGGAGCTTCAGCAGGAGAGCCTGAATAACCTACCTCAC +
Preference number: 1 (lower is better)
Translates to: SAQAMSGLVMASMVT*LEELQQESLNNLPH
Trigger: GTGAGGTAGGTTATTCAGGCTCTCCTGCTGAAGCTCCTCCAAGCAAGTCACCATCGATGCCATCACTAAACCAGACATGGCCTGAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414243.1
ENST00000431346.6
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR CCA 90 bp GCTGCCAGTTCTTTTAAGTTCCATTTCCTGCATGTGGATTTTGCTTaGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCAGG +
Preference number: 1 (lower is better)
Translates to: AASSFKFHFLHVDFA*SHTNGNWMNNSSIR
Trigger: CCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAACTTAAAAGAACTGGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000431346.6
ENST00000483468.5
ENST00000626459.2
3UTR CCA 90 bp GCTGCCAGTTCTTTTAAGTTCCATTTCCTGCATGTGGATTTTGCTTaGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCCTC +
Preference number: 1 (lower is better)
Translates to: AASSFKFHFLHVDFA*SHTNGNWMNNSSIL
Trigger: GAGGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAACTTAAAAGAACTGGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445570.5
3UTR CCA 90 bp ACAATAGCAGTATCAGGATCAGCTGGTGCAATGTTAGAATCAAATTaGGTCAGAGTTTGTGAGCTTGAAGAGCGTTCACTAAATGTCTCC +
Preference number: 1 (lower is better)
Translates to: TIAVSGSAGAMLESN*VRVCELEERSLNVS
Trigger: GGAGACATTTAGTGAACGCTCTTCAAGCTCACAAACTCTGACCCAATTTGATTCTAACATTGCACCAGCTGATCCTGATACTGCTATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431346.6
ENST00000483468.5
ENST00000626459.2
3UTR TCA 90 bp CTTGTTCGTCGTTTACATTTGATGCAGCAAATACTTCAAACTGACTaGAATCTGCAAAATTTGGTTGCTCTGGTATCTGCTGAGGTGAGG +
Preference number: 1 (lower is better)
Translates to: LVRRLHLMQQILQTD*NLQNLVALVSAEVR
Trigger: CCTCACCTCAGCAGATACCAGAGCAACCAAATTTTGCAGATTTCAGTCAGTTTGAAGTATTTGCTGCATCAAATGTAAACGACGAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR TCA 90 bp CTGGCCAAAACGGTGTTGGTTTCCTTATTACGTCTAATTGATGCCTaGATAGCTTTCTTATCTTTCCCAACAGATCTGGGAATAGAAGGT +
Preference number: 1 (lower is better)
Translates to: LAKTVLVSLLRLIDA*IAFLSFPTDLGIEG
Trigger: ACCTTCTATTCCCAGATCTGTTGGGAAAGATAAGAAAGCTATTCAGGCATCAATTAGACGTAATAAGGAAACCAACACCGTTTTGGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR CCA 90 bp GGAGAGACAAGTCAGCATGATGAGAAAGATGGAGTAAAAGATCACTaGAGAAGATTTAGCAAAGTAATTCAGAGGTTGCACTGCAAGTTG +
Preference number: 1 (lower is better)
Translates to: GETSQHDEKDGVKDH*RRFSKVIQRLHCKL
Trigger: CAACTTGCAGTGCAACCTCTGAATTACTTTGCTAAATCTTCTCCAGTGATCTTTTACTCCATCTTTCTCATCATGCTGACTTGTCTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR CCA 90 bp ACCCAAAACCACTTAAAAACAAGTATGTTCACAGTTAACGGCAATTaGCTTATAGGTGAGAGAATGGTCGAAGTTGTTCCAGTTGAACTT +
Preference number: 1 (lower is better)
Translates to: TQNHLKTSMFTVNGN*LIGERMVEVVPVEL
Trigger: AAGTTCAACTGGAACAACTTCGACCATTCTCTCACCTATAAGCCAATTGCCGTTAACTGTGAACATACTTGTTTTTAAGTGGTTTTGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR TCA 90 bp ACACTTGTATTAATGGTTTTGCATCCAATAGTAGGATGGATGGTGTaGTGTTATAATGTCTCAGACACAAGTATCCTGGCTGCAATTATG +
Preference number: 1 (lower is better)
Translates to: TLVLMVLHPIVGWMV*CYNVSDTSILAAIM
Trigger: CATAATTGCAGCCAGGATACTTGTGTCTGAGACATTATAACATCACACCATCCATCCTACTATTGGATGCAAAACCATTAATACAAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR TCA 90 bp TTGCCAAAAAGAAGGTATTTACTTGTGTACCTCATTTGGGTGGCATaGAGTTTAACTTTGTTTCACAAGACTGCATGTAAGTTACCTGGA +
Preference number: 1 (lower is better)
Translates to: LPKRRYLLVYLIWVA*SLTLFHKTACKLPG
Trigger: TCCAGGTAACTTACATGCAGTCTTGTGAAACAAAGTTAAACTTCATGCCACCCAAATGAGGTACACAAGTAAATACCTTCTTTTTGGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR-3UTR GCA 90 bp GGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCAGCATCCACTGGGCGATaGACAGCAGGACCAGGAGCC +
Preference number: 2 (lower is better)
Translates to: GLGGGASGVVPLLTLAGAASTGR*TAGPGA
Trigger: GGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGC...TGCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp GTCTTGGAGGCACTGCAGGAGGATGGGCAACAACTCCAGCCTGTTGTTGTCCTGCACTGCTCACTGCTCTaGTTCAGCTCAGGCCATGTC +
Preference number: 2 (lower is better)
Translates to: VLEALQEDGQQLQPVVVLHCSLL*FSSGHV
Trigger: GACATGGCCTGAGCTGAATCAGAGCAGTGAGCAGTG...CAGGACAACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626459.2
3UTR-3UTR CCA 90 bp AGGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCAGAATGAGAGGGCTGTaGCCTTGGAGGGGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: RFRWWSKWCCAFAHIGRSRMRGL*PWRGRW
Trigger: CCACCTCCCCCTCCAAGGCCACAGCCCTCTCATTCT...GCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR GCA 90 bp ATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGACCAGGAGCCTGTGAGCCTGCATGTGGATTTTaGTTGGAGTCATACGAATGG +
Preference number: 2 (lower is better)
Translates to: MRPSASTGRCTAGPGACEPACGF*LESYEW
Trigger: CCATTCGTATGACTCCAAGCAAAATCCACATGCAGG...CTCACAGGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp GGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCATGGAGGGGGAGGTGGTaGTGCAGTGTTATCAGGCGA +
Preference number: 2 (lower is better)
Translates to: GLGGGASGVVPLLTLAGAWRGRW*CSVIRR
Trigger: TCGCCTGATAACACTGCACCACCACCTCCCCCTCCA...TGCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR CAA 90 bp GCTCAGGCCATGTCTGGTTTAGTGATGGCATCGATGGTGACTTGCTaGGAGGAGCTTCAGCAGGAGAGCCTGAATAACCTACCTCACCTG +
Preference number: 2 (lower is better)
Translates to: AQAMSGLVMASMVTC*EELQQESLNNLPHL
Trigger: CAGGTGAGGTAGGTTATTCAGGCTCTCCTGCTGAAGCTCCTCCAAGCAAGTCACCATCGATGCCATCACTAAACCAGACATGGCCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000414243.1
ENST00000431346.6
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp AGGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCGGTGAGGTACTAGTGTaGGTTATGAGGCCATCGGCA +
Preference number: 2 (lower is better)
Translates to: RFRWWSKWCCAFAHIGRSGEVLV*VMRPSA
Trigger: TGCCGATGGCCTCATAACTCACACTAGTACCTCACC...GCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp TGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTTCTTCTGGAGGGGGAGGTGGTaGTGCAGTGTTATCAGGCGA +
Preference number: 2 (lower is better)
Translates to: WCCAFAHIGRSTSSCLFFWRGRW*CSVIRR
Trigger: TCGCCTGATAACACTGCACCACCACCTCCCCCTCCA...GAAGAAAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp GGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCAAGCCGGCAGGACTTCTaGATGTTTCTCGGCTTCATC +
Preference number: 2 (lower is better)
Translates to: GLGGGASGVVPLLTLAGASRQDF*MFLGFI
Trigger: GATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCT...TGCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp GCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTTTCAGCAGGAGAGCCTaGATAACCTACCTCACCTGG +
Preference number: 2 (lower is better)
Translates to: ASGVVPLLTLAGALAAVFFSRRA*ITYLTW
Trigger: CCAGGTGAGGTAGGTTATTCAGGCTCTCCTGCTGAA...AAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCCCTACCTCACCTGGCTaGTCCCCAACATCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLPTSPG*SPTSAE
Trigger: TTCAGCAGATGTTGGGGATCAGCCAGGTGAGGTAGG...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626459.2
3UTR-3UTR TCA 90 bp AGGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCATCAGGCGACGTTCCTaGATGAGACCTTTGACGAGT +
Preference number: 2 (lower is better)
Translates to: RFRWWSKWCCAFAHIGRSIRRRS*MRPLTS
Trigger: ACTCGTCAAAGGTCTCATTCAGGAACGTCGCCTGAT...GCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp AGGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCGATGATGATCTAGAATaGGAGGGCTGTGGCCTTGGA +
Preference number: 2 (lower is better)
Translates to: RFRWWSKWCCAFAHIGRSDDDLE*EGCGLG
Trigger: TCCAAGGCCACAGCCCTCTCATTCTAGATCATCATC...GCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR GCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCTCCCACTGCTCACTaGTCTGATTCAGCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPSPTAH*SDSAQA
Trigger: GGCCTGAGCTGAATCAGAGCAGTGAGCAGTGGGAGA...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626459.2
3UTR-3UTR CCA 90 bp AATTGGCTTATAGGTGAGAGAATGGTCGAAGTTGTTCCAGTTGAACTTCCAGGGGCCATCGGCATCCACTaGGCGATGCACAGCAGGACC +
Preference number: 2 (lower is better)
Translates to: NWLIGERMVEVVPVELPGAIGIH*AMHSRT
Trigger: GGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGC...CCCTGGAAGTTCAACTGGAACAACTTCGACCATTCTCTCACCTATAAGCCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp GGTACTAGTGTGAGTTATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGCTAGTGGGATTTGTATaGTCGCTGCCAGTTCTTTTA +
Preference number: 2 (lower is better)
Translates to: GTSVSYEAIGIHWAMHSRLVGFV*SLPVLL
Trigger: TAAAAGAACTGGCAGCGATCATACAAATCCCACTAG...CCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCATAACTCACACTAGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR GCA 90 bp CTTTTTCAGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATCTTGTTCGTTGGTCTTGGAGGCACTaGAGGAGGATGGGCAACAAC +
Preference number: 2 (lower is better)
Translates to: LFQPAGLLDVSRLHHLVRWSWRH*RRMGNN
Trigger: GTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGACCA...ACGAACAAGATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCTGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR GCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCGTGGTGTTGTGCCTTTaGTCACATTGGCAGGAGCAC +
Preference number: 2 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPVVLCL*SHWQEH
Trigger: GTGCTCCTGCCAATGTGAGCAAAGGCACAACACCAC...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626459.2
3UTR-3UTR GCA 90 bp GCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTGAGCAAGTGGTGTTGTaGCTTTGCTCACATTGGCAG +
Preference number: 2 (lower is better)
Translates to: ASGVVPLLTLAGALAAVFEQVVL*LCSHWQ
Trigger: CTGCCAATGTGAGCAAAGGCACAACACCACTTGCTC...AAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp CAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTGGCCGGCACTGCAGGAGGATaGGCAACAACTCCAGCCTGT +
Preference number: 2 (lower is better)
Translates to: QEQQLRHPSFVYVHQLLAGTAGG*ATTPAC
Trigger: ACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCC...GGCCAGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp TGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTTCTTCAGGTGGTGGAGCAAGTaGTGTTGTGCCTTTGCTCAC +
Preference number: 2 (lower is better)
Translates to: WCCAFAHIGRSTSSCLFFRWWSK*CCAFAH
Trigger: GTGAGCAAAGGCACAACACCACTTGCTCCACCACCT...GAAGAAAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp ATGAACAATAGCAGTATCCTCACTGCTCTGATTCAGCTCAGGCCATGTCTGGTTCCTACCTCACCTGGCTaGTCCCCAACATCTGATGCA +
Preference number: 2 (lower is better)
Translates to: MNNSSILTALIQLRPCLVPTSPG*SPTSDA
Trigger: TGCATCAGATGTTGGGGATCAGCCAGGTGAGGTAGG...AACCAGACATGGCCTGAGCTGAATCAGAGCAGTGAGGATACTGCTATTGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414243.1
3UTR-3UTR TCA 90 bp TCAATCTGTAGCAAGTCAACCCCTGCAATCAGCACTACAAACAGGGCCATGCCAATCAGGCGACGTTCCTaGATGAGACCTTTGACGAGT +
Preference number: 2 (lower is better)
Translates to: SICSKSTPAISTTNRAMPIRRRS*MRPLTS
Trigger: ACTCGTCAAAGGTCTCATTCAGGAACGTCGCCTGAT...TGGCATGGCCCTGTTTGTAGTGCTGATTGCAGGGGTTGACTTGCTACAGATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR-3UTR CCA 90 bp GATGCAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTAGAATGAGAGGGCTGTaGCCTTGGAGGGGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: DARTAAKTPVFCVCSSTSRMRGL*PWRGRW
Trigger: CCACCTCCCCCTCCAAGGCCACAGCCCTCTCATTCT...AGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp TGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTTCTTCAACAGGTTTAGGTGGTaGAGCAAGTGGTGTTGTGCC +
Preference number: 2 (lower is better)
Translates to: WCCAFAHIGRSTSSCLFFNRFRW*SKWCCA
Trigger: GGCACAACACCACTTGCTCCACCACCTAAACCTGTT...GAAGAAAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp TTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGCCTACCTCACCTGGCTaGTCCCCAACATCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: FHFLHVDFAWSHTNGNWMPTSPG*SPTSAE
Trigger: TTCAGCAGATGTTGGGGATCAGCCAGGTGAGGTAGG...CATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp GATCAGAAGCTTTTTCAGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATGATGATGATCTAGAATaGGAGGGCTGTGGCCTTGGA +
Preference number: 2 (lower is better)
Translates to: DQKLFQPAGLLDVSRLHHDDDLE*EGCGLG
Trigger: TCCAAGGCCACAGCCCTCTCATTCTAGATCATCATC...ATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCTGAAAAAGCTTCTGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR GCA 90 bp CATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACACACTGTGTCAACCCTaGCTCCCTCCTGTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: HFLHVDFAWSHTNGNWMNTLCQP*LPPVGS
Trigger: AGAACCCACAGGAGGGAGGCAGGGTTGACACAGTGT...GTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431346.6
3UTR-3UTR GCA 90 bp ATGAACAATAGCAGTATCCTCACTGCTCTGATTCAGCTCAGGCCATGTCTGGTTTCCAACCTAGCCTCCTaGTGGAACACTGTGTCAACC +
Preference number: 2 (lower is better)
Translates to: MNNSSILTALIQLRPCLVSNLAS*WNTVST
Trigger: GGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTGGA...AACCAGACATGGCCTGAGCTGAATCAGAGCAGTGAGGATACTGCTATTGTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414243.1
3UTR-3UTR GCA 90 bp AGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCTCCAACCTAGCCTCCTaGTGGAACACTGTGTCAACC +
Preference number: 2 (lower is better)
Translates to: SHTNGNWMNNSSIRISWCSNLAS*WNTVST
Trigger: GGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTGGA...GCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431346.6
3UTR-3UTR GCA 90 bp AGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCGCATCGATGGTGACTTaGTTGGAGGAGCTTCAGCAG +
Preference number: 2 (lower is better)
Translates to: SHTNGNWMNNSSIRISWCASMVT*LEELQQ
Trigger: CTGCTGAAGCTCCTCCAAGCAAGTCACCATCGATGC...GCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431346.6
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp TCAATCTGTAGCAAGTCAACCCCTGCAATCAGCACTACAAACAGGGCCATGCCATCGAACAGGTTTAGGTaGTGGAGCAAGTGGTGTTGT +
Preference number: 2 (lower is better)
Translates to: SICSKSTPAISTTNRAMPSNRFR*WSKWCC
Trigger: ACAACACCACTTGCTCCACCACCTAAACCTGTTCGA...TGGCATGGCCCTGTTTGTAGTGCTGATTGCAGGGGTTGACTTGCTACAGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR-3UTR TCA 90 bp AATTGGCTTATAGGTGAGAGAATGGTCGAAGTTGTTCCAGTTGAACTTCCAGGGTTCAGCAGGAGAGCCTaGATAACCTACCTCACCTGG +
Preference number: 2 (lower is better)
Translates to: NWLIGERMVEVVPVELPGFSRRA*ITYLTW
Trigger: CCAGGTGAGGTAGGTTATTCAGGCTCTCCTGCTGAA...CCCTGGAAGTTCAACTGGAACAACTTCGACCATTCTCTCACCTATAAGCCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp TGCTCTGCCCCTGACATCATCAGAGCATCAGGGCTGCTGAATCTTCCAAATCAACTAGCAACCACCAGATaGAAAGCAGCACAAAACTCA +
Preference number: 2 (lower is better)
Translates to: CSAPDIIRASGLLNLPNQLATTR*KAAQNS
Trigger: TGAGTTTTGTGCTGCTTTTCATCTGGTGGTTGCTAG...TTGATTTGGAAGATTCAGCAGCCCTGATGCTCTGATGATGTCAGGGGCAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530575.1
3UTR-3UTR GCA 90 bp GATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCCTCACACTGTGTCAACCCTaGCTCCCTCCTGTGGGTTCT +
Preference number: 2 (lower is better)
Translates to: DFAWSHTNGNWMNNSSILTLCQP*LPPVGS
Trigger: AGAACCCACAGGAGGGAGGCAGGGTTGACACAGTGT...GAGGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414243.1
3UTR-3UTR CCA 90 bp GATCAGAAGCTTTTTCAGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATGCTCCCGATCTGTTCTaGGTCAGAAGTAAAAGAGTC +
Preference number: 2 (lower is better)
Translates to: DQKLFQPAGLLDVSRLHHAPDLF*VRSKRV
Trigger: GACTCTTTTACTTCTGACCCAGAACAGATCGGGAGC...ATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCTGAAAAAGCTTCTGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp AGGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCGAAATCTGCAAAATTTaGTTGCTCTGGTATCTGCTG +
Preference number: 2 (lower is better)
Translates to: RFRWWSKWCCAFAHIGRSEICKI*LLWYLL
Trigger: CAGCAGATACCAGAGCAACCAAATTTTGCAGATTTC...GCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp TTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAAGTATCCTCACTGCTCTaGTTCAGCTCAGGCCATGTC +
Preference number: 2 (lower is better)
Translates to: FPACGFCLESYEWELDEQVSSLL*FSSGHV
Trigger: GACATGGCCTGAGCTGAATCAGAGCAGTGAGGATAC...TTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445570.5
3UTR-3UTR TCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCCAACTAAAGCCATACTaGAAGCCACTTGGAAACTTC +
Preference number: 2 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPQLKPY*KPLGNF
Trigger: GAAGTTTCCAAGTGGCTTTCAGTATGGCTTTAGTTG...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450536.7
3UTR-3UTR GCA 90 bp GATCAGAAGCTTTTTCAGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATTTTGACGAGTTACATTaGTCCCGATCTGTTCTGGGT +
Preference number: 2 (lower is better)
Translates to: DQKLFQPAGLLDVSRLHHFDELH*SRSVLG
Trigger: ACCCAGAACAGATCGGGAGCAATGTAACTCGTCAAA...ATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCTGAAAAAGCTTCTGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR GCA 90 bp GTTCCAGTTGAACTTCCAGGGAAATTCTCTCCTCAAGAACATCCTTTAATTGTTAGGGGGAGGTGGTGGTaGAGTGTTATCAGGCGACGT +
Preference number: 2 (lower is better)
Translates to: VPVELPGKFSPQEHPLIVRGRWW*SVIRRR
Trigger: ACGTCGCCTGATAACACTGCACCACCACCTCCCCCT...AACAATTAAAGGATGTTCTTGAGGAGAGAATTTCCCTGGAAGTTCAACTGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp TTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAAAACCTAGCCTCCTGCTaGAACACTGTGTCAACCCTG +
Preference number: 2 (lower is better)
Translates to: FPACGFCLESYEWELDEQNLASC*NTVSTL
Trigger: CAGGGTTGACACAGTGTTCCAGCAGGAGGCTAGGTT...TTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431346.6
3UTR-3UTR CCA 90 bp AATTGGCTTATAGGTGAGAGAATGGTCGAAGTTGTTCCAGTTGAACTTCCAGGGATAACCTACCTCACCTaGCTGATCCCCAACATCTGC +
Preference number: 2 (lower is better)
Translates to: NWLIGERMVEVVPVELPGITYLT*LIPNIC
Trigger: GCAGATGTTGGGGATCAGCCAGGTGAGGTAGGTTAT...CCCTGGAAGTTCAACTGGAACAACTTCGACCATTCTCTCACCTATAAGCCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp CATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACATAACCTACCTCACCTaGCTGATCCCCAACATCTGC +
Preference number: 2 (lower is better)
Translates to: HFLHVDFAWSHTNGNWMNITYLT*LIPNIC
Trigger: GCAGATGTTGGGGATCAGCCAGGTGAGGTAGGTTAT...GTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp AAAACAAGTATGTTCACAGTTAACGGCAATTGGCTTATAGGTGAGAGAATGGTCGGCACTGCAGGAGGATaGGCAACAACTCCAGCCTGT +
Preference number: 2 (lower is better)
Translates to: KTSMFTVNGNWLIGERMVGTAGG*ATTPAC
Trigger: ACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCC...GACCATTCTCTCACCTATAAGCCAATTGCCGTTAACTGTGAACATACTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp CTTTTTCAGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATCTTGTTCGTCTAGTGGGATTTGTATaGTCGCTGCCAGTTCTTTTA +
Preference number: 2 (lower is better)
Translates to: LFQPAGLLDVSRLHHLVRLVGFV*SLPVLL
Trigger: TAAAAGAACTGGCAGCGATCATACAAATCCCACTAG...ACGAACAAGATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCTGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCAACAGCATATTGTCCTaGATAAGGCATACTCCAGAA +
Preference number: 2 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPNSILS*IRHTPE
Trigger: TTCTGGAGTATGCCTTATTCAGGACAATATGCTGTT...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
3UTR-3UTR GCA 90 bp CAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTGGCCCAGAAAAGGTGGGTGTaGCAACAAACACAATCTACC +
Preference number: 2 (lower is better)
Translates to: QEQQLRHPSFVYVHQLLAQKRWV*QQTQST
Trigger: GGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTG...GGCCAGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626459.2
3UTR-3UTR CCA 90 bp ACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAATGTTAGCTCAGGCCATGTCTaGTTTAGTGATGGCATCGAT +
Preference number: 2 (lower is better)
Translates to: TNGNWMNNSSIRISWCNVSSGHV*FSDGID
Trigger: ATCGATGCCATCACTAAACCAGACATGGCCTGAGCT...AACATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431346.6
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp GCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTAGTATCAGGATCAGCTaGTGCAATGTTAGAATCAAA +
Preference number: 2 (lower is better)
Translates to: ASGVVPLLTLAGALAAVFSIRIS*CNVRIK
Trigger: TTTGATTCTAACATTGCACCAGCTGATCCTGATACT...AAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp GATGCAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTAACAGGTTTAGGTGGTaGAGCAAGTGGTGTTGTGCC +
Preference number: 2 (lower is better)
Translates to: DARTAAKTPVFCVCSSTSNRFRW*SKWCCA
Trigger: GGCACAACACCACTTGCTCCACCACCTAAACCTGTT...AGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCTCTCCAAATTGGCTTTaGACCCAAAACCACTTAAAA +
Preference number: 2 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLSPNWL*TQNHLK
Trigger: TTTTAAGTGGTTTTGGGTTCAAAGCCAATTTGGAGA...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
3UTR-3UTR TCA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAATTCAGCAGGAGAGCCTaGATAACCTACCTCACCTGG +
Preference number: 2 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKFSRRA*ITYLTW
Trigger: CCAGGTGAGGTAGGTTATTCAGGCTCTCCTGCTGAA...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626459.2
3UTR-3UTR TCA 90 bp TGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTTCTTCGTATTTGTCACAAGTTaGCATGTAAAAGAGGCTTCA +
Preference number: 2 (lower is better)
Translates to: WCCAFAHIGRSTSSCLFFVFVTS*HVKEAS
Trigger: TGAAGCCTCTTTTACATGTCAACTTGTGACAAATAC...GAAGAAAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626459.2
3UTR-3UTR GCA 90 bp TTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGCCTGCATGTGGATTTTaGTTGGAGTCATACGAATGG +
Preference number: 2 (lower is better)
Translates to: FHFLHVDFAWSHTNGNWMPACGF*LESYEW
Trigger: CCATTCGTATGACTCCAAGCAAAATCCACATGCAGG...CATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000431346.6
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR GCA 90 bp CGCTGTGCAAACTTGGGCAAGTTGTATAACTTCTCTGTGCTTCAGTTTCTCCATCCTGCATGTGGATTTTaGTTGGAGTCATACGAATGG +
Preference number: 2 (lower is better)
Translates to: RCANLGKLYNFSVLQFLHPACGF*LESYEW
Trigger: CCATTCGTATGACTCCAAGCAAAATCCACATGCAGG...ATGGAGAAACTGAAGCACAGAGAAGTTATACAACTTGCCCAAGTTTGCACAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR-3UTR GCA 90 bp GATCAGAAGCTTTTTCAGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATATGTTCTCTCAATTATaGATGCATGCTGGAAGAGAC +
Preference number: 2 (lower is better)
Translates to: DQKLFQPAGLLDVSRLHHMFSQL*MHAGRD
Trigger: GTCTCTTCCAGCATGCATGCATAATTGAGAGAACAT...ATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCTGAAAAAGCTTCTGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR-3UTR CCA 90 bp CATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTAGCTCAGGCCATGTCTaGTTTAGTGATGGCATCGAT +
Preference number: 2 (lower is better)
Translates to: HVDFAWSHTNGNWMNNSSSSGHV*FSDGID
Trigger: ATCGATGCCATCACTAAACCAGACATGGCCTGAGCT...ACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414243.1
ENST00000431346.6
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp TGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGCATGTGGATTTTGCTTaGAGTCATACGAATGGGAAC +
Preference number: 2 (lower is better)
Translates to: WSHTNGNWMNNSSIRISWHVDFA*SHTNGN
Trigger: GTTCCCATTCGTATGACTCCAAGCAAAATCCACATG...CCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431346.6
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp AAAACAAGTATGTTCACAGTTAACGGCAATTGGCTTATAGGTGAGAGAATGGTCAGGTGGTGGAGCAAGTaGTGTTGTGCCTTTGCTCAC +
Preference number: 2 (lower is better)
Translates to: KTSMFTVNGNWLIGERMVRWWSK*CCAFAH
Trigger: GTGAGCAAAGGCACAACACCACTTGCTCCACCACCT...GACCATTCTCTCACCTATAAGCCAATTGCCGTTAACTGTGAACATACTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp TCAATCTGTAGCAAGTCAACCCCTGCAATCAGCACTACAAACAGGGCCATGCCAATTATGCATGCATGCTaGAAGAGACAGACTGAAATT +
Preference number: 2 (lower is better)
Translates to: SICSKSTPAISTTNRAMPIMHAC*KRQTEI
Trigger: AATTTCAGTCTGTCTCTTCCAGCATGCATGCATAAT...TGGCATGGCCCTGTTTGTAGTGCTGATTGCAGGGGTTGACTTGCTACAGATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR-3UTR TCA 90 bp GATGCAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTCTAGCAACCACCAGATaGAAAGCAGCACAAAACTCA +
Preference number: 2 (lower is better)
Translates to: DARTAAKTPVFCVCSSTSLATTR*KAAQNS
Trigger: TGAGTTTTGTGCTGCTTTTCATCTGGTGGTTGCTAG...AGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp AGTTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGAATCCCCAACATCTGCTaGATCTTCCAAATCAATCAG +
Preference number: 2 (lower is better)
Translates to: SSISCMWILLGVIRMGTGIPNIC*IFQINQ
Trigger: CTGATTGATTTGGAAGATTCAGCAGATGTTGGGGAT...TCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp AACCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTATCTTATCCTACCTCACCTGGCTaGTCCCCAACATCTGCTGAA +
Preference number: 2 (lower is better)
Translates to: NHLLQYYQKRISPMNLSYPTSPG*SPTSAE
Trigger: TTCAGCAGATGTTGGGGATCAGCCAGGTGAGGTAGG...ATAAGATAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp TGGAATCCCAGTTACGCTGTGCAAACTTGGGCAAGTTGTATAACTTCTCTGTGCAGAAGTAAAAGAGTCTaGACTACTGTAACCATCTGC +
Preference number: 2 (lower is better)
Translates to: WNPSYAVQTWASCITSLCRSKRV*TTVTIC
Trigger: GCAGATGGTTACAGTAGTTCAGACTCTTTTACTTCT...GCACAGAGAAGTTATACAACTTGCCCAAGTTTGCACAGCGTAACTGGGATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR-3UTR GCA 90 bp GGGATTTGTATGATCGCTGCCAGTTCTTTTAAGTTCCATTTCCTGCATGTGGATCCTGCATGTGGATTTTaGTTGGAGTCATACGAATGG +
Preference number: 2 (lower is better)
Translates to: GICMIAASSFKFHFLHVDPACGF*LESYEW
Trigger: CCATTCGTATGACTCCAAGCAAAATCCACATGCAGG...ATCCACATGCAGGAAATGGAACTTAAAAGAACTGGCAGCGATCATACAAATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000431346.6
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp CAATTCGCTATTCAATCTGGCCAAAACGGTGTTGGTTTCCTTATTACGTCTAATATAACCTACCTCACCTaGCTGATCCCCAACATCTGC +
Preference number: 2 (lower is better)
Translates to: QFAIQSGQNGVGFLITSNITYLT*LIPNIC
Trigger: GCAGATGTTGGGGATCAGCCAGGTGAGGTAGGTTAT...ATTAGACGTAATAAGGAAACCAACACCGTTTTGGCCAGATTGAATAGCGAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp AAAACAAGTATGTTCACAGTTAACGGCAATTGGCTTATAGGTGAGAGAATGGTCGGCAGTGTGACACAGTaGATGTGGCAGTTGACTAGA +
Preference number: 2 (lower is better)
Translates to: KTSMFTVNGNWLIGERMVGSVTQ*MWQLTR
Trigger: TCTAGTCAACTGCCACATCCACTGTGTCACACTGCC...GACCATTCTCTCACCTATAAGCCAATTGCCGTTAACTGTGAACATACTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR-3UTR TCA 90 bp CATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACCAGAAAACGCCATCCTaGCCTTTTTATTGTCGAAAT +
Preference number: 2 (lower is better)
Translates to: HFLHVDFAWSHTNGNWMNQKTPS*PFYCRN
Trigger: ATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTG...GTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp AATTGGCTTATAGGTGAGAGAATGGTCGAAGTTGTTCCAGTTGAACTTCCAGGGCATACGAATGGGAACTaGATGAACAATAGCAGTATC +
Preference number: 2 (lower is better)
Translates to: NWLIGERMVEVVPVELPGHTNGN*MNNSSI
Trigger: GATACTGCTATTGTTCATCCAGTTCCCATTCGTATG...CCCTGGAAGTTCAACTGGAACAACTTCGACCATTCTCTCACCTATAAGCCAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp AATTGGCTTATAGGTGAGAGAATGGTCGAAGTTGTTCCAGTTGAACTTCCAGGGTCCATTTCCTGCATGTaGATTTTGCTTGGAGTCATA +
Preference number: 2 (lower is better)
Translates to: NWLIGERMVEVVPVELPGSISCM*ILLGVI
Trigger: TATGACTCCAAGCAAAATCCACATGCAGGAAATGGA...CCCTGGAAGTTCAACTGGAACAACTTCGACCATTCTCTCACCTATAAGCCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp AATTGGCTTATAGGTGAGAGAATGGTCGAAGTTGTTCCAGTTGAACTTCCAGGGATTCGCTATTCAATCTaGCCAAAACGGTGTTGGTTT +
Preference number: 2 (lower is better)
Translates to: NWLIGERMVEVVPVELPGIRYSI*PKRCWF
Trigger: AAACCAACACCGTTTTGGCCAGATTGAATAGCGAAT...CCCTGGAAGTTCAACTGGAACAACTTCGACCATTCTCTCACCTATAAGCCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp CTTTTTCAGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATCTTGTTCGTAATGGGGATAAGTGGTaGAAATCAAATGACAGAATA +
Preference number: 2 (lower is better)
Translates to: LFQPAGLLDVSRLHHLVRNGDKW*KSNDRI
Trigger: TATTCTGTCATTTGATTTCCACCACTTATCCCCATT...ACGAACAAGATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCTGAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR CAA 90 bp CCATTCTATAAATTAAATTGGTGTGTGGTATTAGCCATAGAAGCATaGCATATCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAA +
Preference number: 2 (lower is better)
Translates to: PFYKLNWCVVLAIEA*HIPDAREQKRWVCQ
Trigger: TTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGATATGCAATGCTTCTATGGCTAATACCACACACCAATTTAATTTATAGAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
3UTR-3UTR TCA 90 bp TTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGTCTCCAAATTGGCTTTaGACCCAAAACCACTTAAAA +
Preference number: 2 (lower is better)
Translates to: FHFLHVDFAWSHTNGNWMSPNWL*TQNHLK
Trigger: TTTTAAGTGGTTTTGGGTTCAAAGCCAATTTGGAGA...CATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp GATGCAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTGAAATCTGCAAAATTTaGTTGCTCTGGTATCTGCTG +
Preference number: 2 (lower is better)
Translates to: DARTAAKTPVFCVCSSTSEICKI*LLWYLL
Trigger: CAGCAGATACCAGAGCAACCAAATTTTGCAGATTTC...AGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR CAA 90 bp TTTATCATTTCCAATGCTAAGATCCCAAATGTACTATTACATACCTaGTTTACAGGACTGAGAAGGCAGTGTGACACAGTGGATGTGGCA +
Preference number: 2 (lower is better)
Translates to: FIISNAKIPNVLLHT*FTGLRRQCDTVDVA
Trigger: TGCCACATCCACTGTGTCACACTGCCTTCTCAGTCCTGTAAACAAGGTATGTAATAGTACATTTGGGATCTTAGCATTGGAAATGATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR-3UTR TCA 90 bp TTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATCTCCAAATTGGCTTTaGACCCAAAACCACTTAAAA +
Preference number: 2 (lower is better)
Translates to: FPACGFCLESYEWELDEQSPNWL*TQNHLK
Trigger: TTTTAAGTGGTTTTGGGTTCAAAGCCAATTTGGAGA...TTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp TACTGTAACCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTACTAGCAACCACCAGATaGAAAGCAGCACAAAACTCA +
Preference number: 2 (lower is better)
Translates to: YCNHLLQYYQKRISPMNLLATTR*KAAQNS
Trigger: TGAGTTTTGTGCTGCTTTTCATCTGGTGGTTGCTAG...TAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGGTTACAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp TTATTTTCTTCTAAAAGGTCAGATGGTTTCACAAGTAATGGGCTAGTGGGATTTAGCTCAGGCCATGTCTaGTTTAGTGATGGCATCGAT +
Preference number: 2 (lower is better)
Translates to: LFSSKRSDGFTSNGLVGFSSGHV*FSDGID
Trigger: ATCGATGCCATCACTAAACCAGACATGGCCTGAGCT...AAATCCCACTAGCCCATTACTTGTGAAACCATCTGACCTTTTAGAAGAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp CATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTCCAAATCAATCAGTTTaGGCATTAAGCTTTCAGGAA +
Preference number: 2 (lower is better)
Translates to: HVDFAWSHTNGNWMNNSSPNQSV*ALSFQE
Trigger: TTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG...ACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp GGGATTTGTATGATCGCTGCCAGTTCTTTTAAGTTCCATTTCCTGCATGTGGATCCAAATCAATCAGTTTaGGCATTAAGCTTTCAGGAA +
Preference number: 2 (lower is better)
Translates to: GICMIAASSFKFHFLHVDPNQSV*ALSFQE
Trigger: TTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG...ATCCACATGCAGGAAATGGAACTTAAAAGAACTGGCAGCGATCATACAAATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp TTATTTTCTTCTAAAAGGTCAGATGGTTTCACAAGTAATGGGCTAGTGGGATTTCTAGCAACCACCAGATaGAAAGCAGCACAAAACTCA +
Preference number: 2 (lower is better)
Translates to: LFSSKRSDGFTSNGLVGFLATTR*KAAQNS
Trigger: TGAGTTTTGTGCTGCTTTTCATCTGGTGGTTGCTAG...AAATCCCACTAGCCCATTACTTGTGAAACCATCTGACCTTTTAGAAGAAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR TCA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATCAGAAAAACAGGTGTTaGGTAGTTTCCTGGGCCTTT +
Preference number: 2 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNQKNRC*VVSWAF
Trigger: AAAGGCCCAGGAAACTACTCAACACCTGTTTTTCTG...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450536.7
3UTR-3UTR CCA 90 bp GATGCAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTATGTTAGAATCAAATTaGGTCAGAGTTTGTGAGCTT +
Preference number: 2 (lower is better)
Translates to: DARTAAKTPVFCVCSSTSMLESN*VRVCEL
Trigger: AAGCTCACAAACTCTGACCCAATTTGATTCTAACAT...AGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp CAATTCGCTATTCAATCTGGCCAAAACGGTGTTGGTTTCCTTATTACGTCTAATCCAAATCAATCAGTTTaGGCATTAAGCTTTCAGGAA +
Preference number: 2 (lower is better)
Translates to: QFAIQSGQNGVGFLITSNPNQSV*ALSFQE
Trigger: TTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG...ATTAGACGTAATAAGGAAACCAACACCGTTTTGGCCAGATTGAATAGCGAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp CCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTATCTTATTTTCCATTTCCTGCATGTaGATTTTGCTTGGAGTCATA +
Preference number: 2 (lower is better)
Translates to: PSATVLPEANFTDEFILFSISCM*ILLGVI
Trigger: TATGACTCCAAGCAAAATCCACATGCAGGAAATGGA...AAATAAGATAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
3UTR-3UTR CCA 90 bp TTATTTTCTTCTAAAAGGTCAGATGGTTTCACAAGTAATGGGCTAGTGGGATTTATGTTAGAATCAAATTaGGTCAGAGTTTGTGAGCTT +
Preference number: 2 (lower is better)
Translates to: LFSSKRSDGFTSNGLVGFMLESN*VRVCEL
Trigger: AAGCTCACAAACTCTGACCCAATTTGATTCTAACAT...AAATCCCACTAGCCCATTACTTGTGAAACCATCTGACCTTTTAGAAGAAAATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
3UTR CCA 72 bp TGTGAGGGCTGTGGTCTTGGAGGCACTGCAGGAGGATaGGCAACAACTCCAGCCTGTTGTTGTCCTGTGGTG +
Preference number: 3 (lower is better)
Translates to: CEGCGLGGTAGG*ATTPACCCPVV
Trigger: CACCACAGGACAACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGACCACAGCCCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR GCA 72 bp CCCCAACATCTGATGCAGTGTTCCAACCTAGCCTCCTaGTGGAACACTGTGTCAACCCTGCCTCCCTCCTGT +
Preference number: 3 (lower is better)
Translates to: PQHLMQCSNLAS*WNTVSTLPPSC
Trigger: ACAGGAGGGAGGCAGGGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAGATGTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
3UTR CCA 72 bp CAACATCTGATGCAGTGTTCCAACCTAGCCTCCTGCTaGAACACTGTGTCAACCCTGCCTCCCTCCTGTGGG +
Preference number: 3 (lower is better)
Translates to: QHLMQCSNLASC*NTVSTLPPSCG
Trigger: CCCACAGGAGGGAGGCAGGGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAGATGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
3UTR-3UTR CAA 90 bp GGTACTAGTGTGAGTTATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGAACAACTCCAGCCTGTaGTTGTCCTGTGGTGACTGT +
Preference number: 3 (lower is better)
Translates to: GTSVSYEAIGIHWAMHSRNNSSL*LSCGDC
Trigger: ACAGTCACCACAGGACAACAACAGGCTGGAGTTGTT...CCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCATAACTCACACTAGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CAA 90 bp GGTACTAGTGTGAGTTATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGAACTCCAGCCTGTTGTaGTCCTGTGGTGACTGTAAA +
Preference number: 3 (lower is better)
Translates to: GTSVSYEAIGIHWAMHSRNSSLL*SCGDCK
Trigger: TTTACAGTCACCACAGGACAACAACAGGCTGGAGTT...CCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCATAACTCACACTAGTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CAA 90 bp GGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCAGCATGTGGATTTTGCTaGGAGTCATACGAATGGGAA +
Preference number: 3 (lower is better)
Translates to: GLGGGASGVVPLLTLAGAACGFC*ESYEWE
Trigger: TTCCCATTCGTATGACTCCAAGCAAAATCCACATGC...TGCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CAA 90 bp AGGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCCTGGCCAAAACGGTGTaGGTTTCCTTATTACGTCTA +
Preference number: 3 (lower is better)
Translates to: RFRWWSKWCCAFAHIGRSLAKTV*VSLLRL
Trigger: TAGACGTAATAAGGAAACCAACACCGTTTTGGCCAG...GCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CAA 90 bp GCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTCAGTGGATGTGGCAGTaGACTAGATATCAAAGGACT +
Preference number: 3 (lower is better)
Translates to: ASGVVPLLTLAGALAAVFQWMWQ*TRYQRT
Trigger: AGTCCTTTGATATCTAGTCAACTGCCACATCCACTG...AAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR-3UTR CAA 90 bp GATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCCTCGGCATCGATGGTGACTaGCTTGGAGGAGCTTCAGCA +
Preference number: 3 (lower is better)
Translates to: DFAWSHTNGNWMNNSSILGIDGD*LGGASA
Trigger: TGCTGAAGCTCCTCCAAGCAAGTCACCATCGATGCC...GAGGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000445570.5
3UTR-3UTR CAA 90 bp CAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTGGCCAACAACTCCAGCCTGTaGTTGTCCTGTGGTGACTGT +
Preference number: 3 (lower is better)
Translates to: QEQQLRHPSFVYVHQLLANNSSL*LSCGDC
Trigger: ACAGTCACCACAGGACAACAACAGGCTGGAGTTGTT...GGCCAGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CAA 90 bp ATGTCTCCCACTGCTCACTGCTCTGATTCAGCTCAGGCCATGTCTGGTTTAGTGGTCTCCAAATTGGCTTaGAACCCAAAACCACTTAAA +
Preference number: 3 (lower is better)
Translates to: MSPTAHCSDSAQAMSGLVVSKLA*NPKPLK
Trigger: TTTAAGTGGTTTTGGGTTCAAAGCCAATTTGGAGAC...CACTAAACCAGACATGGCCTGAGCTGAATCAGAGCAGTGAGCAGTGGGAGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626459.2
3UTR-3UTR CAA 90 bp GATCAGAAGCTTTTTCAGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATTCCTGCATGTGGATTTaGCTTGGAGTCATACGAATG +
Preference number: 3 (lower is better)
Translates to: DQKLFQPAGLLDVSRLHHSCMWI*LGVIRM
Trigger: CATTCGTATGACTCCAAGCAAAATCCACATGCAGGA...ATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCTGAAAAAGCTTCTGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR TCA 72 bp ATCTGCAAAATTTGGTTGCTCTGGTATCTGCTGAGGTaGGGTACTAGTGTGAGTTATGAGGCCATCGGCATC +
Preference number: 3 (lower is better)
Translates to: ICKIWLLWYLLR*GTSVSYEAIGI
Trigger: GATGCCGATGGCCTCATAACTCACACTAGTACCTCACCTCAGCAGATACCAGAGCAACCAAATTTTGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CAA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCGTCTCCAAATTGGCTTaGAACCCAAAACCACTTAAA +
Preference number: 3 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLVSKLA*NPKPLK
Trigger: TTTAAGTGGTTTTGGGTTCAAAGCCAATTTGGAGAC...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
3UTR-3UTR CAA 90 bp CTGGAATCCCAGTTACGCTGTGCAAACTTGGGCAAGTTGTATAACTTCTCTGTGAGAGAATGGTCGAAGTaGTTCCAGTTGAACTTCCAG +
Preference number: 3 (lower is better)
Translates to: LESQLRCANLGKLYNFSVREWSK*FQLNFQ
Trigger: CTGGAAGTTCAACTGGAACAACTTCGACCATTCTCT...CACAGAGAAGTTATACAACTTGCCCAAGTTTGCACAGCGTAACTGGGATTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR-3UTR CAA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCATTAATCTTGGAAGCTaGAGGTTGTCAGTTTCCCTT +
Preference number: 3 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPINLGS*RLSVSL
Trigger: AAGGGAAACTGACAACCTCAAGCTTCCAAGATTAAT...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450536.7
3UTR CCA 72 bp CATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTaGATGAACAATAGCAGTATCAGGATCAGCTGGTGC +
Preference number: 3 (lower is better)
Translates to: HVDFAWSHTNGN*MNNSSIRISWC
Trigger: GCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431346.6
ENST00000483468.5
ENST00000626459.2
3UTR CCA 72 bp CCAGACTACTGGAATCCCAGTTACGCTGTGCAAACTTaGGCAAGTTGTATAACTTCTCTGTGCTTCAGTTTC +
Preference number: 3 (lower is better)
Translates to: PDYWNPSYAVQT*ASCITSLCFSF
Trigger: GAAACTGAAGCACAGAGAAGTTATACAACTTGCCCAAGTTTGCACAGCGTAACTGGGATTCCAGTAGTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR-3UTR CAA 90 bp CATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACGCATGTGGATTTTGCTaGGAGTCATACGAATGGGAA +
Preference number: 3 (lower is better)
Translates to: HFLHVDFAWSHTNGNWMNACGFC*ESYEWE
Trigger: TTCCCATTCGTATGACTCCAAGCAAAATCCACATGC...GTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000431346.6
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CAA 90 bp CTTTTTCAGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATCTTGTTCGTACTGGATATGAGATCTaGGCCAAGTCATTTACCTTT +
Preference number: 3 (lower is better)
Translates to: LFQPAGLLDVSRLHHLVRTGYEI*AKSFTF
Trigger: AAAGGTAAATGACTTGGCCAAGATCTCATATCCAGT...ACGAACAAGATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCTGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR TCA 72 bp TGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATaGACAATAGCAGTATCAGGATCAGCTGGTGCAATG +
Preference number: 3 (lower is better)
Translates to: WILLGVIRMGTG*TIAVSGSAGAM
Trigger: CATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431346.6
ENST00000483468.5
ENST00000626459.2
3UTR TCA 72 bp GCTCCCGATCTGTTCTGGGTCAGAAGTAAAAGAGTCTaGACTACTGTAACCATCTGCTACAGTATTACCAGA +
Preference number: 3 (lower is better)
Translates to: APDLFWVRSKRV*TTVTICYSITR
Trigger: TCTGGTAATACTGTAGCAGATGGTTACAGTAGTTCAGACTCTTTTACTTCTGACCCAGAACAGATCGGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
3UTR CCA 72 bp TCGCTGCCAGTTCTTTTAAGTTCCATTTCCTGCATGTaGATTTTGCTTGGAGTCATACGAATGGGAACTGGA +
Preference number: 3 (lower is better)
Translates to: SLPVLLSSISCM*ILLGVIRMGTG
Trigger: TCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAACTTAAAAGAACTGGCAGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000431346.6
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CAA 90 bp ATGAACAATAGCAGTATCCTCACTGCTCTGATTCAGCTCAGGCCATGTCTGGTTGTCTCCAAATTGGCTTaGAACCCAAAACCACTTAAA +
Preference number: 3 (lower is better)
Translates to: MNNSSILTALIQLRPCLVVSKLA*NPKPLK
Trigger: TTTAAGTGGTTTTGGGTTCAAAGCCAATTTGGAGAC...AACCAGACATGGCCTGAGCTGAATCAGAGCAGTGAGGATACTGCTATTGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445570.5
3UTR-3UTR CAA 90 bp CTTTTTCAGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATCTTGTTCGTCTGAAATTGCCCTCTTaGGAACATCTTACCTTAAAA +
Preference number: 3 (lower is better)
Translates to: LFQPAGLLDVSRLHHLVRLKLPS*EHLTLK
Trigger: TTTTAAGGTAAGATGTTCCAAAGAGGGCAATTTCAG...ACGAACAAGATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCTGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR TCA 72 bp TACGTTCAAATCCTAGCTCTCGTCCCTCACTGGATATaGGATCTTGGCCAAGTCATTTACCTTTTGATGGTT +
Preference number: 3 (lower is better)
Translates to: YVQILALVPHWI*DLGQVIYLLMV
Trigger: AACCATCAAAAGGTAAATGACTTGGCCAAGATCTCATATCCAGTGAGGGACGAGAGCTAGGATTTGAACGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR TCA 72 bp ACAAAGCAAGTCAGTGCGACTTGCCAGTGCGACCCCTaGAAGATGATTCTATTATGTACGTGCACATATTTT +
Preference number: 3 (lower is better)
Translates to: TKQVSATCQCDP*KMILLCTCTYF
Trigger: AAAATATGTGCACGTACATAATAGAATCATCTTTCAGGGGTCGCACTGGCAAGTCGCACTGACTTGCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR CCA 72 bp CATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTaGATGAACAATAGCAGTATCCTCACTGCTCTGATT +
Preference number: 3 (lower is better)
Translates to: HVDFAWSHTNGN*MNNSSILTALI
Trigger: AATCAGAGCAGTGAGGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000445570.5
3UTR-3UTR CAA 90 bp CAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTGGCCGTTCGTCGTTTACATTaGATGCAGCAAATACTTCAA +
Preference number: 3 (lower is better)
Translates to: QEQQLRHPSFVYVHQLLAVRRLH*MQQILQ
Trigger: TTGAAGTATTTGCTGCATCAAATGTAAACGACGAAC...GGCCAGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CAA 90 bp AATTGGCTTATAGGTGAGAGAATGGTCGAAGTTGTTCCAGTTGAACTTCCAGGGGGAATTTCAAATAAATaGGGGAACAGTGCATGTGTC +
Preference number: 3 (lower is better)
Translates to: NWLIGERMVEVVPVELPGGISNK*GNSACV
Trigger: GACACATGCACTGTTCCCCAATTTATTTGAAATTCC...CCCTGGAAGTTCAACTGGAACAACTTCGACCATTCTCTCACCTATAAGCCAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR TCA 72 bp CTACCCCATGCTAGAAAAATCAGAATGCGGCCACAATaGGAGCAAATCAAGCATCTGAGCATGAGTTATATA +
Preference number: 3 (lower is better)
Translates to: LPHARKIRMRPQ*EQIKHLSMSYI
Trigger: TATATAACTCATGCTCAGATGCTTGATTTGCTCTCATTGTGGCCGCATTCTGATTTTTCTAGCATGGGGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR CCA 72 bp GTTCACAAAGAAAACTGCTCTAATAGGCTACAGCAATaGTTTCCAAATGGAGCTCTCCAGGGCACTAAAATT +
Preference number: 3 (lower is better)
Translates to: VHKENCSNRLQQ*FPNGALQGTKI
Trigger: AATTTTAGTGCCCTGGAGAGCTCCATTTGGAAACCATTGCTGTAGCCTATTAGAGCAGTTTTCTTTGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR-3UTR CAA 90 bp AAAACAAGTATGTTCACAGTTAACGGCAATTGGCTTATAGGTGAGAGAATGGTCGTCCCAAATTCCATTTaGCATACTGTGCTTGGTCAT +
Preference number: 3 (lower is better)
Translates to: KTSMFTVNGNWLIGERMVVPNSI*HTVLGH
Trigger: ATGACCAAGCACAGTATGCAAAATGGAATTTGGGAC...GACCATTCTCTCACCTATAAGCCAATTGCCGTTAACTGTGAACATACTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR TCA 72 bp ACGGTGTTGGTTTCCTTATTACGTCTAATTGATGCCTaGATAGCTTTCTTATCTTTCCCAACAGATCTGGGA +
Preference number: 3 (lower is better)
Translates to: TVLVSLLRLIDA*IAFLSFPTDLG
Trigger: TCCCAGATCTGTTGGGAAAGATAAGAAAGCTATTCAGGCATCAATTAGACGTAATAAGGAAACCAACACCGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CAA 90 bp CAATTCGCTATTCAATCTGGCCAAAACGGTGTTGGTTTCCTTATTACGTCTAATGTCTCCAAATTGGCTTaGAACCCAAAACCACTTAAA +
Preference number: 3 (lower is better)
Translates to: QFAIQSGQNGVGFLITSNVSKLA*NPKPLK
Trigger: TTTAAGTGGTTTTGGGTTCAAAGCCAATTTGGAGAC...ATTAGACGTAATAAGGAAACCAACACCGTTTTGGCCAGATTGAATAGCGAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CAA 90 bp CCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTATCTTATTTTCCTGCATGTGGATTTaGCTTGGAGTCATACGAATG +
Preference number: 3 (lower is better)
Translates to: PSATVLPEANFTDEFILFSCMWI*LGVIRM
Trigger: CATTCGTATGACTCCAAGCAAAATCCACATGCAGGA...AAATAAGATAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
3UTR TCA 72 bp TTAATGGTTTTGCATCCAATAGTAGGATGGATGGTGTaGTGTTATAATGTCTCAGACACAAGTATCCTGGCT +
Preference number: 3 (lower is better)
Translates to: LMVLHPIVGWMV*CYNVSDTSILA
Trigger: AGCCAGGATACTTGTGTCTGAGACATTATAACATCACACCATCCATCCTACTATTGGATGCAAAACCATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR CCA 72 bp CACTTAAAAACAAGTATGTTCACAGTTAACGGCAATTaGCTTATAGGTGAGAGAATGGTCGAAGTTGTTCCA +
Preference number: 3 (lower is better)
Translates to: HLKTSMFTVNGN*LIGERMVEVVP
Trigger: TGGAACAACTTCGACCATTCTCTCACCTATAAGCCAATTGCCGTTAACTGTGAACATACTTGTTTTTAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR-3UTR CAA 90 bp AAAACAAGTATGTTCACAGTTAACGGCAATTGGCTTATAGGTGAGAGAATGGTCTGTATTTGTCACAAGTaGACATGTAAAAGAGGCTTC +
Preference number: 3 (lower is better)
Translates to: KTSMFTVNGNWLIGERMVCICHK*TCKRGF
Trigger: GAAGCCTCTTTTACATGTCAACTTGTGACAAATACA...GACCATTCTCTCACCTATAAGCCAATTGCCGTTAACTGTGAACATACTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626459.2
3UTR TCA 72 bp CGTTTACATTTGATGCAGCAAATACTTCAAACTGACTaGAATCTGCAAAATTTGGTTGCTCTGGTATCTGCT +
Preference number: 3 (lower is better)
Translates to: RLHLMQQILQTD*NLQNLVALVSA
Trigger: AGCAGATACCAGAGCAACCAAATTTTGCAGATTTCAGTCAGTTTGAAGTATTTGCTGCATCAAATGTAAACG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR CCA 72 bp TGCATGTGTCCCAAATTCCATTTTGCATACTGTGCTTaGTCATATATGACACATCTTAATGCAGTTAATATG +
Preference number: 3 (lower is better)
Translates to: CMCPKFHFAYCA*SYMTHLNAVNM
Trigger: CATATTAACTGCATTAAGATGTGTCATATATGACCAAGCACAGTATGCAAAATGGAATTTGGGACACATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR GCA 72 bp TGGAGAAGATTTAGCAAAGTAATTCAGAGGTTGCACTaGAAGTTGTGTTTCATAGGTTTAACAAAATTCAGT +
Preference number: 3 (lower is better)
Translates to: WRRFSKVIQRLH*KLCFIGLTKFS
Trigger: ACTGAATTTTGTTAAACCTATGAAACACAACTTGCAGTGCAACCTCTGAATTACTTTGCTAAATCTTCTCCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR TCA 90 bp AGGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCTCGGGGGATCTGGGCTaGGCGTGGCCGCCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: RFRWWSKWCCAFAHIGRSSGDLG*AWPPLR
Trigger: GCGGAGCGGCGGCCACGCTCAGCCCAGATCCCCCGA...GCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR GCA 90 bp GTCTTGGAGGCACTGCAGGAGGATGGGCAACAACTCCAGCCTGTTGTTGTCCTGCTCACACGCGCCAGGTaGGCCCGAGCAACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: VLEALQEDGQQLQPVVVLLTRAR*ARATGP
Trigger: GGGCCCTGTTGCTCGGGCGCACCTGGCGCGTGTGAG...CAGGACAACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp ATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGACCAGGAGCCTGTGAGAGAATGAGAGGGCTGTaGCCTTGGAGGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: MRPSASTGRCTAGPGACERMRGL*PWRGRW
Trigger: CCACCTCCCCCTCCAAGGCCACAGCCCTCTCATTCT...CTCACAGGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCTCGGGGGATCTGGGCTaGGCGTGGCCGCCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLSGDLG*AWPPLR
Trigger: GCGGAGCGGCGGCCACGCTCAGCCCAGATCCCCCGA...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp GCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTCGGCCGCGGGGAGGGTaGAGAGAAAGAGGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: ASGVVPLLTLAGALAAVFRPRGG*RERGGG
Trigger: GCCCCCGCCTCTTTCTCTGCACCCTCCCCGCGGCCG...AAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp ATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGACCAGGAGCCTGTGAGGATCCCTTTTTCACTTaGCCCCTGCCAGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: MRPSASTGRCTAGPGACEDPFFT*PLPGGG
Trigger: CCCACCACCTGGCAGGGGGCAAGTGAAAAAGGGATC...CTCACAGGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp GTCTTGGAGGCACTGCAGGAGGATGGGCAACAACTCCAGCCTGTTGTTGTCCTGAAGTTTCGGGGGATCTaGGCTGAGCGTGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VLEALQEDGQQLQPVVVLKFRGI*AERGRR
Trigger: GCGGCGGCCACGCTCAGCCCAGATCCCCCGAAACTT...CAGGACAACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CTTTTTCAGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATCTTGTTCGTTCGGGGGATCTGGGCTaGGCGTGGCCGCCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: LFQPAGLLDVSRLHHLVRSGDLG*AWPPLR
Trigger: GCGGAGCGGCGGCCACGCTCAGCCCAGATCCCCCGA...ACGAACAAGATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCTGAAAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR GCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCCGCCGCCATTTACAGTaGCCCGGCCCGGCCCCGACG +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLRRHLQ*PGPAPT
Trigger: CGTCGGGGCCGGGCCGGGGCACTGTAAATGGCGGCG...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp ATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGACCAGGAGCCTGTGAGGCAGATGTACGAGGCTaGACCGTATCATGGCTTACG +
Preference number: 4 (lower is better)
Translates to: MRPSASTGRCTAGPGACEADVRG*TVSWLT
Trigger: CGTAAGCCATGATACGGTTCAGCCTCGTACATCTGC...CTCACAGGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp GCCTCCTGCTGGAACACTGTGTCAACCCTGCCTCCCTCCTGTGGGTTCTGCTCTCCTACCTCACCTGGCTaGTCCCCAACATCTGATGCA +
Preference number: 4 (lower is better)
Translates to: ASCWNTVSTLPPSCGFCSPTSPG*SPTSDA
Trigger: TGCATCAGATGTTGGGGATCAGCCAGGTGAGGTAGG...AGAGCAGAACCCACAGGAGGGAGGCAGGGTTGACACAGTGTTCCAGCAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR GCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCCTCACACGCGCCAGGTaGGCCCGAGCAACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLLTRAR*ARATGP
Trigger: GGGCCCTGTTGCTCGGGCGCACCTGGCGCGTGTGAG...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp GCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTACGTCGTTCGGCAGCTaGGCGGCCCGGAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASGVVPLLTLAGALAAVFTSFGS*AARNSS
Trigger: GGAGCTGTTCCGGGCCGCGCAGCTGCCGAACGACGT...AAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp ATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGACCAGGAGCCTGTGAGGGATGCAGGTTCCTGTaGATCTGCAGATGTACGAGG +
Preference number: 4 (lower is better)
Translates to: MRPSASTGRCTAGPGACEGCRFL*ICRCTR
Trigger: CCTCGTACATCTGCAGATGCACAGGAACCTGCATCC...CTCACAGGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CAACCTAGCCTCCTGCTGGAACACTGTGTCAACCCTGCCTCCCTCCTGTGGGTTGTTCTGCTCTGCCCCTaGCATCATCAGAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: QPSLLLEHCVNPASLLWVVLLCP*HHQSIR
Trigger: CCTGATGCTCTGATGATGTCAGGGGCAGAGCAGAAC...AACCCACAGGAGGGAGGCAGGGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR GCA 90 bp ATGTCTCCCACTGCTCACTGCTCTGATTCAGCTCAGGCCATGTCTGGTTTAGTGGTCTCCCCGGCTCCCTaGCGATTCCCCCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: MSPTAHCSDSAQAMSGLVVSPAP*RFPQTS
Trigger: GGAAGTCTGGGGGAATCGGCAGGGAGCCGGGGAGAC...CACTAAACCAGACATGGCCTGAGCTGAATCAGAGCAGTGAGCAGTGGGAGACAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000626459.2
CDS-3UTR GCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCACGTCGTTCGGCAGCTaGGCGGCCCGGAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLTSFGS*AARNSS
Trigger: GGAGCTGTTCCGGGCCGCGCAGCTGCCGAACGACGT...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp AGTTATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGACCAGGAGCCTGGCATCGATGGTGACTTaGTTGGAGGAGCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SYEAIGIHWAMHSRTRSLASMVT*LEELQQ
Trigger: CTGCTGAAGCTCCTCCAAGCAAGTCACCATCGATGC...CAGGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCATAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp AGCCTCCTGCTGGAACACTGTGTCAACCCTGCCTCCCTCCTGTGGGTTCTGCTCAACCTAGCCTCCTGCTaGAACACTGTGTCAACCCTG +
Preference number: 4 (lower is better)
Translates to: SLLLEHCVNPASLLWVLLNLASC*NTVSTL
Trigger: CAGGGTTGACACAGTGTTCCAGCAGGAGGCTAGGTT...GAGCAGAACCCACAGGAGGGAGGCAGGGTTGACACAGTGTTCCAGCAGGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR TCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCCCAGCACCCGCCCGTTaGCCACCACCTTCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPPAPAR*PPPSWC
Trigger: GCACCAAGAAGGTGGTGGTCAACGGGCGGGTGCTGG...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCGTCTCCCCGGCTCCCTaGCGATTCCCCCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPVSPAP*RFPQTS
Trigger: GGAAGTCTGGGGGAATCGGCAGGGAGCCGGGGAGAC...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp TGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGCTCACACGCGCCAGGTaGGCCCGAGCAACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: WSHTNGNWMNNSSIRISWLTRAR*ARATGP
Trigger: GGGCCCTGTTGCTCGGGCGCACCTGGCGCGTGTGAG...CCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp GTCTTGGAGGCACTGCAGGAGGATGGGCAACAACTCCAGCCTGTTGTTGTCCTGTGGTCTTGGAGGCACTaGAGGAGGATGGGCAACAAC +
Preference number: 4 (lower is better)
Translates to: VLEALQEDGQQLQPVVVLWSWRH*RRMGNN
Trigger: GTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGACCA...CAGGACAACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCAAGTTTCGGGGGATCTaGGCTGAGCGTGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLKFRGI*AERGRR
Trigger: GCGGCGGCCACGCTCAGCCCAGATCCCCCGAAACTT...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp AGCCTCCTGCTGGAACACTGTGTCAACCCTGCCTCCCTCCTGTGGGTTCTGCTCGTTCGTACTGTTGTCTaGTCCTGGACAGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SLLLEHCVNPASLLWVLLVRTVV*SWTEAG
Trigger: TCCTGCTTCTGTCCAGGACCAGACAACAGTACGAAC...GAGCAGAACCCACAGGAGGGAGGCAGGGTTGACACAGTGTTCCAGCAGGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431346.6
CDS-3UTR CCA 90 bp CAACCTAGCCTCCTGCTGGAACACTGTGTCAACCCTGCCTCCCTCCTGTGGGTTAACCTAGCCTCCTGCTaGAACACTGTGTCAACCCTG +
Preference number: 4 (lower is better)
Translates to: QPSLLLEHCVNPASLLWVNLASC*NTVSTL
Trigger: CAGGGTTGACACAGTGTTCCAGCAGGAGGCTAGGTT...AACCCACAGGAGGGAGGCAGGGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR TCA 90 bp CTGATGCAGTGTTCCAACCTAGCCTCCTGCTGGAACACTGTGTCAACCCTGCCTCACTGCTCACTGCTCTaGTTCAGCTCAGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: LMQCSNLASCWNTVSTLPHCSLL*FSSGHV
Trigger: GACATGGCCTGAGCTGAATCAGAGCAGTGAGCAGTG...AGGCAGGGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431346.6
CDS-3UTR TCA 90 bp CTGATGCAGTGTTCCAACCTAGCCTCCTGCTGGAACACTGTGTCAACCCTGCCTGTTCTGCTCTGCCCCTaGCATCATCAGAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: LMQCSNLASCWNTVSTLPVLLCP*HHQSIR
Trigger: CCTGATGCTCTGATGATGTCAGGGGCAGAGCAGAAC...AGGCAGGGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR GCA 90 bp TTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGCTCACACGCGCCAGGTaGGCCCGAGCAACAGGGCCC +
Preference number: 4 (lower is better)
Translates to: FHFLHVDFAWSHTNGNWMLTRAR*ARATGP
Trigger: GGGCCCTGTTGCTCGGGCGCACCTGGCGCGTGTGAG...CATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp GTCTTGGAGGCACTGCAGGAGGATGGGCAACAACTCCAGCCTGTTGTTGTCCTGGGATGCAGGTTCCTGTaGATCTGCAGATGTACGAGG +
Preference number: 4 (lower is better)
Translates to: VLEALQEDGQQLQPVVVLGCRFL*ICRCTR
Trigger: CCTCGTACATCTGCAGATGCACAGGAACCTGCATCC...CAGGACAACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp CTGGCTGATCCCCAACATCTGATGCAGTGTTCCAACCTAGCCTCCTGCTGGAACACACTGTGTCAACCCTaGCTCCCTCCTGTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LADPQHLMQCSNLASCWNTLCQP*LPPVGS
Trigger: AGAACCCACAGGAGGGAGGCAGGGTTGACACAGTGT...GTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAGATGTTGGGGATCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR CCA 90 bp AGTTATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGACCAGGAGCCTGAGCTCAGGCCATGTCTaGTTTAGTGATGGCATCGAT +
Preference number: 4 (lower is better)
Translates to: SYEAIGIHWAMHSRTRSLSSGHV*FSDGID
Trigger: ATCGATGCCATCACTAAACCAGACATGGCCTGAGCT...CAGGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCATAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCTTCCCACCGCTGGGATaGCGGCTGTGCTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLFPPLG*RLCFLH
Trigger: ATGGAGGAAGCACAGCCGTCATCCCAGCGGTGGGAA...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp CAACCTAGCCTCCTGCTGGAACACTGTGTCAACCCTGCCTCCCTCCTGTGGGTTGAGCATCAGGGCTGCTaGATCTTCCAAATCAATCAG +
Preference number: 4 (lower is better)
Translates to: QPSLLLEHCVNPASLLWVEHQGC*IFQINQ
Trigger: CTGATTGATTTGGAAGATTCAGCAGCCCTGATGCTC...AACCCACAGGAGGGAGGCAGGGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR GCA 90 bp GCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCCTCACTGCTGTCTCCCCGGCTCCCTaGCGATTCCCCCAGACTTCC +
Preference number: 4 (lower is better)
Translates to: AWSHTNGNWMNNSSILTAVSPAP*RFPQTS
Trigger: GGAAGTCTGGGGGAATCGGCAGGGAGCCGGGGAGAC...AGCAGTGAGGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445570.5
CDS-3UTR GCA 90 bp CATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACACGTCGTTCGGCAGCTaGGCGGCCCGGAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: HFLHVDFAWSHTNGNWMNTSFGS*AARNSS
Trigger: GGAGCTGTTCCGGGCCGCGCAGCTGCCGAACGACGT...GTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp GGTACTAGTGTGAGTTATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGGAAGTTGGTGGGGATTaGTGTGGTGAAACTACTGGG +
Preference number: 4 (lower is better)
Translates to: GTSVSYEAIGIHWAMHSREVGGD*CGETTG
Trigger: CCCAGTAGTTTCACCACAGCAATCCCCACCAACTTC...CCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCATAACTCACACTAGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp AGCCTCCTGCTGGAACACTGTGTCAACCCTGCCTCCCTCCTGTGGGTTCTGCTCCCTGCATGTGGATTTTaGTTGGAGTCATACGAATGG +
Preference number: 4 (lower is better)
Translates to: SLLLEHCVNPASLLWVLLPACGF*LESYEW
Trigger: CCATTCGTATGACTCCAAGCAAAATCCACATGCAGG...GAGCAGAACCCACAGGAGGGAGGCAGGGTTGACACAGTGTTCCAGCAGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR GCA 90 bp CTGGCTGATCCCCAACATCTGATGCAGTGTTCCAACCTAGCCTCCTGCTGGAACTCCAACCTAGCCTCCTaGTGGAACACTGTGTCAACC +
Preference number: 4 (lower is better)
Translates to: LADPQHLMQCSNLASCWNSNLAS*WNTVST
Trigger: GGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTGGA...GTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAGATGTTGGGGATCAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR CCA 90 bp GTCTTGGAGGCACTGCAGGAGGATGGGCAACAACTCCAGCCTGTTGTTGTCCTGGGCAGTGTGACACAGTaGATGTGGCAGTTGACTAGA +
Preference number: 4 (lower is better)
Translates to: VLEALQEDGQQLQPVVVLGSVTQ*MWQLTR
Trigger: TCTAGTCAACTGCCACATCCACTGTGTCACACTGCC...CAGGACAACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR TCA 90 bp GGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCAGCAGATGTACGAGGCTaGACCGTATCATGGCTTACG +
Preference number: 4 (lower is better)
Translates to: GLGGGASGVVPLLTLAGAADVRG*TVSWLT
Trigger: CGTAAGCCATGATACGGTTCAGCCTCGTACATCTGC...TGCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCGATCCCTTTTTCACTTaGCCCCTGCCAGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPDPFFT*PLPGGG
Trigger: CCCACCACCTGGCAGGGGGCAAGTGAAAAAGGGATC...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCGGTGGAGGTGGGGAATaGCCTGACCACACTGCATCA +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLGGGGE*PDHTAS
Trigger: TGATGCAGTGTGGTCAGGGCATTCCCCACCTCCACC...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR GCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCAGGGGGAGGTGGTGGTaGAGTGTTATCAGGCGACGT +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPRGRWW*SVIRRR
Trigger: ACGTCGCCTGATAACACTGCACCACCACCTCCCCCT...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp GGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCAGTGGTGTTGTGCCTTTaGTCACATTGGCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: GLGGGASGVVPLLTLAGAVVLCL*SHWQEH
Trigger: GTGCTCCTGCCAATGTGAGCAAAGGCACAACACCAC...TGCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp AGGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCGTGGTGTTGTGCCTTTaGTCACATTGGCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: RFRWWSKWCCAFAHIGRSVVLCL*SHWQEH
Trigger: GTGCTCCTGCCAATGTGAGCAAAGGCACAACACCAC...GCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTTGCCCCCTGCCAGGTaGTGGGGGAATTACACCAGA +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPLPPAR*WGNYTR
Trigger: TCTGGTGTAATTCCCCCACCACCTGGCAGGGGGCAA...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp TGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTTCTTCTTGCCCCCTGCCAGGTaGTGGGGGAATTACACCAGA +
Preference number: 4 (lower is better)
Translates to: WCCAFAHIGRSTSSCLFFLPPAR*WGNYTR
Trigger: TCTGGTGTAATTCCCCCACCACCTGGCAGGGGGCAA...GAAGAAAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCCACTATTCCCACCGCTaGGATGACGGCTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPHYSHR*DDGCAS
Trigger: GGAAGCACAGCCGTCATCCCAGCGGTGGGAATAGTG...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCGGCACTGCAGGAGGATaGGCAACAACTCCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLGTAGG*ATTPAC
Trigger: ACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCC...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp AGGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCAGGTGGTGGAGCAAGTaGTGTTGTGCCTTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: RFRWWSKWCCAFAHIGRSRWWSK*CCAFAH
Trigger: GTGAGCAAAGGCACAACACCACTTGCTCCACCACCT...GCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCTGGGGATTGCTGTGGTaGAACTACTGGGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLWGLLW*NYWGCR
Trigger: CCTGCATCCCCAGTAGTTTCACCACAGCAATCCCCA...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCCTGACCCAGTTTTCTTaGGGTGGAGGTGGGGAATGC +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLLTQFS*GGGGEC
Trigger: GCATTCCCCACCTCCACCTCAAGAAAACTGGGTCAG...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR TCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCCCTACCTCACCTGGCTaGTCCCCAACATCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPPTSPG*SPTSAE
Trigger: TTCAGCAGATGTTGGGGATCAGCCAGGTGAGGTAGG...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp TGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTTCTTCCCTACCTCACCTGGCTaGTCCCCAACATCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: WCCAFAHIGRSTSSCLFFPTSPG*SPTSAE
Trigger: TTCAGCAGATGTTGGGGATCAGCCAGGTGAGGTAGG...GAAGAAAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp ATGTCTCCCACTGCTCACTGCTCTGATTCAGCTCAGGCCATGTCTGGTTTAGTGTTCAGCAGGAGAGCCTaGATAACCTACCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: MSPTAHCSDSAQAMSGLVFSRRA*ITYLTW
Trigger: CCAGGTGAGGTAGGTTATTCAGGCTCTCCTGCTGAA...CACTAAACCAGACATGGCCTGAGCTGAATCAGAGCAGTGAGCAGTGGGAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431346.6
ENST00000626459.2
CDS-3UTR GCA 90 bp ATGTCTCCCACTGCTCACTGCTCTGATTCAGCTCAGGCCATGTCTGGTTTAGTGGCATCGATGGTGACTTaGTTGGAGGAGCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: MSPTAHCSDSAQAMSGLVASMVT*LEELQQ
Trigger: CTGCTGAAGCTCCTCCAAGCAAGTCACCATCGATGC...CACTAAACCAGACATGGCCTGAGCTGAATCAGAGCAGTGAGCAGTGGGAGACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431346.6
ENST00000626459.2
CDS-3UTR GCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCTGGTCTTGGAGGCACTaGAGGAGGATGGGCAACAAC +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLWSWRH*RRMGNN
Trigger: GTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGACCA...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCCCCCCTGCCAGGTGGTaGGGGAATTACACCAGAATA +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPPPARW*GNYTRI
Trigger: TATTCTGGTGTAATTCCCCCACCACCTGGCAGGGGG...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
52% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp CTGGCTGATCCCCAACATCTGATGCAGTGTTCCAACCTAGCCTCCTGCTGGAACAGCTCAGGCCATGTCTaGTTTAGTGATGGCATCGAT +
Preference number: 4 (lower is better)
Translates to: LADPQHLMQCSNLASCWNSSGHV*FSDGID
Trigger: ATCGATGCCATCACTAAACCAGACATGGCCTGAGCT...GTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAGATGTTGGGGATCAGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR CCA 90 bp AGTTATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGACCAGGAGCCTGCATACGAATGGGAACTaGATGAACAATAGCAGTATC +
Preference number: 4 (lower is better)
Translates to: SYEAIGIHWAMHSRTRSLHTNGN*MNNSSI
Trigger: GATACTGCTATTGTTCATCCAGTTCCCATTCGTATG...CAGGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCATAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp TGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGAGAATGAGAGGGCTGTaGCCTTGGAGGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: WSHTNGNWMNNSSIRISWRMRGL*PWRGRW
Trigger: CCACCTCCCCCTCCAAGGCCACAGCCCTCTCATTCT...CCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp AGACCTTTGACGAGTTACATTGCTCCCGATCTGTTCTGGGTCAGAAGTAAAAGAGCCATCGGCATCCACTaGGCGATGCACAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: RPLTSYIAPDLFWVRSKRAIGIH*AMHSRT
Trigger: GGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGC...TCTTTTACTTCTGACCCAGAACAGATCGGGAGCAATGTAACTCGTCAAAGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp TTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGGCCATCGGCATCCACTaGGCGATGCACAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: FHFLHVDFAWSHTNGNWMAIGIH*AMHSRT
Trigger: GGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGC...CATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp TCTCCCACTGCTCACTGCTCTGATTCAGCTCAGGCCATGTCTGGTTTAGTGATGAGCCGGCAGGACTTCTaGATGTTTCTCGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: SPTAHCSDSAQAMSGLVMSRQDF*MFLGFI
Trigger: GATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCT...CATCACTAAACCAGACATGGCCTGAGCTGAATCAGAGCAGTGAGCAGTGGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626459.2
CDS-3UTR TCA 90 bp CTGGCTGATCCCCAACATCTGATGCAGTGTTCCAACCTAGCCTCCTGCTGGAACAATGGCAGTTGTAGCTaGTGCTACAGTTCGTACTGT +
Preference number: 4 (lower is better)
Translates to: LADPQHLMQCSNLASCWNNGSCS*CYSSYC
Trigger: ACAGTACGAACTGTAGCATCAGCTACAACTGCCATT...GTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAGATGTTGGGGATCAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431346.6
CDS-3UTR TCA 90 bp GCCTCCTGCTGGAACACTGTGTCAACCCTGCCTCCCTCCTGTGGGTTCTGCTCTGAGAGTTCCCAAATATaGGAAAGTTCAAGAATAGGA +
Preference number: 4 (lower is better)
Translates to: ASCWNTVSTLPPSCGFCSESSQI*ESSRIG
Trigger: TCCTATTCTTGAACTTTCTCATATTTGGGAACTCTC...AGAGCAGAACCCACAGGAGGGAGGCAGGGTTGACACAGTGTTCCAGCAGGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR TCA 90 bp GATCAGAAGCTTTTTCAGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATCACTGCTCACTGCTCTaGTTCAGCTCAGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: DQKLFQPAGLLDVSRLHHHCSLL*FSSGHV
Trigger: GACATGGCCTGAGCTGAATCAGAGCAGTGAGCAGTG...ATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCTGAAAAAGCTTCTGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000626459.2
CDS-3UTR TCA 90 bp TCTCCCACTGCTCACTGCTCTGATTCAGCTCAGGCCATGTCTGGTTTAGTGATGGATGATGATCTAGAATaGGAGGGCTGTGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SPTAHCSDSAQAMSGLVMDDDLE*EGCGLG
Trigger: TCCAAGGCCACAGCCCTCTCATTCTAGATCATCATC...CATCACTAAACCAGACATGGCCTGAGCTGAATCAGAGCAGTGAGCAGTGGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626459.2
CDS-3UTR TCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCGGTGAGGTACTAGTGTaGGTTATGAGGCCATCGGCA +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPGEVLV*VMRPSA
Trigger: TGCCGATGGCCTCATAACTCACACTAGTACCTCACC...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCGGATGCAGGTTCCTGTaGATCTGCAGATGTACGAGG +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPGCRFL*ICRCTR
Trigger: CCTCGTACATCTGCAGATGCACAGGAACCTGCATCC...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp TCTCCCACTGCTCACTGCTCTGATTCAGCTCAGGCCATGTCTGGTTTAGTGATGGAAGTTGGTGGGGATTaGTGTGGTGAAACTACTGGG +
Preference number: 4 (lower is better)
Translates to: SPTAHCSDSAQAMSGLVMEVGGD*CGETTG
Trigger: CCCAGTAGTTTCACCACAGCAATCCCCACCAACTTC...CATCACTAAACCAGACATGGCCTGAGCTGAATCAGAGCAGTGAGCAGTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626459.2
CDS-3UTR GCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCGCATCGATGGTGACTTaGTTGGAGGAGCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPASMVT*LEELQQ
Trigger: CTGCTGAAGCTCCTCCAAGCAAGTCACCATCGATGC...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp GGGATTTGTATGATCGCTGCCAGTTCTTTTAAGTTCCATTTCCTGCATGTGGATGCATCCACTGGGCGATaGACAGCAGGACCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GICMIAASSFKFHFLHVDASTGR*TAGPGA
Trigger: GGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGC...ATCCACATGCAGGAAATGGAACTTAAAAGAACTGGCAGCGATCATACAAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCGTGGTGTTGTGCCTTTaGTCACATTGGCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLVVLCL*SHWQEH
Trigger: GTGCTCCTGCCAATGTGAGCAAAGGCACAACACCAC...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp CAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTGGCCTGGAGGGGGAGGTGGTaGTGCAGTGTTATCAGGCGA +
Preference number: 4 (lower is better)
Translates to: QEQQLRHPSFVYVHQLLAWRGRW*CSVIRR
Trigger: TCGCCTGATAACACTGCACCACCACCTCCCCCTCCA...GGCCAGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp TCAAATTGGGTCAGAGTTTGTGAGCTTGAAGAGCGTTCACTAAATGTCTCCCACAGAATGAGAGGGCTGTaGCCTTGGAGGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SNWVRVCELEERSLNVSHRMRGL*PWRGRW
Trigger: CCACCTCCCCCTCCAAGGCCACAGCCCTCTCATTCT...GTGGGAGACATTTAGTGAACGCTCTTCAAGCTCACAAACTCTGACCCAATTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCAGCCGGCAGGACTTCTaGATGTTTCTCGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLSRQDF*MFLGFI
Trigger: GATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCT...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp GGTACTAGTGTGAGTTATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGCCAGAATACGACCCTTaGTTTTCAGAATCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: GTSVSYEAIGIHWAMHSRPEYDP*FSESEE
Trigger: TTCTTCAGATTCTGAAAATCAAGGGTCGTATTCTGG...CCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCATAACTCACACTAGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp TTCTGCTCTGCCCCTGACATCATCAGAGCATCAGGGCTGCTGAATCTTCCAAATACCAGCAGAAGAACCTaGTTGTGCTTCACCAAAGGG +
Preference number: 4 (lower is better)
Translates to: FCSAPDIIRASGLLNLPNTSRRT*LCFTKG
Trigger: CCCTTTGGTGAAGCACAATCAGGTTCTTCTGCTGGT...ATTTGGAAGATTCAGCAGCCCTGATGCTCTGATGATGTCAGGGGCAGAGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR TCA 90 bp CAACCTAGCCTCCTGCTGGAACACTGTGTCAACCCTGCCTCCCTCCTGTGGGTTGAGAGTTCCCAAATATaGGAAAGTTCAAGAATAGGA +
Preference number: 4 (lower is better)
Translates to: QPSLLLEHCVNPASLLWVESSQI*ESSRIG
Trigger: TCCTATTCTTGAACTTTCTCATATTTGGGAACTCTC...AACCCACAGGAGGGAGGCAGGGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR TCA 90 bp GCTGATCCCCAACATCTGATGCAGTGTTCCAACCTAGCCTCCTGCTGGAACACTCTAGCAACCACCAGATaGAAAGCAGCACAAAACTCA +
Preference number: 4 (lower is better)
Translates to: ADPQHLMQCSNLASCWNTLATTR*KAAQNS
Trigger: TGAGTTTTGTGCTGCTTTTCATCTGGTGGTTGCTAG...AGTGTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAGATGTTGGGGATCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR TCA 90 bp CAACATCTGATGCAGTGTTCCAACCTAGCCTCCTGCTGGAACACTGTGTCAACCGAGCATCAGGGCTGCTaGATCTTCCAAATCAATCAG +
Preference number: 4 (lower is better)
Translates to: QHLMQCSNLASCWNTVSTEHQGC*IFQINQ
Trigger: CTGATTGATTTGGAAGATTCAGCAGCCCTGATGCTC...GGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAGATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR TCA 90 bp GCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCCTCACTGCTCCTACCTCACCTGGCTaGTCCCCAACATCTGATGCA +
Preference number: 4 (lower is better)
Translates to: AWSHTNGNWMNNSSILTAPTSPG*SPTSDA
Trigger: TGCATCAGATGTTGGGGATCAGCCAGGTGAGGTAGG...AGCAGTGAGGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414243.1
CDS-3UTR TCA 90 bp GGTACTAGTGTGAGTTATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGAACAGCATATTGTCCTaGATAAGGCATACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GTSVSYEAIGIHWAMHSRNSILS*IRHTPE
Trigger: TTCTGGAGTATGCCTTATTCAGGACAATATGCTGTT...CCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCATAACTCACACTAGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626459.2
CDS-3UTR GCA 90 bp TACTGTAACCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTAACGTCGTTCGGCAGCTaGGCGGCCCGGAACAGCTCC +
Preference number: 4 (lower is better)
Translates to: YCNHLLQYYQKRISPMNLTSFGS*AARNSS
Trigger: GGAGCTGTTCCGGGCCGCGCAGCTGCCGAACGACGT...TAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGGTTACAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR GCA 90 bp AATTGGGTCAGAGTTTGTGAGCTTGAAGAGCGTTCACTAAATGTCTCCCACTGCTCTCCCACTGCTCACTaGTCTGATTCAGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: NWVRVCELEERSLNVSHCSPTAH*SDSAQA
Trigger: GGCCTGAGCTGAATCAGAGCAGTGAGCAGTGGGAGA...GCAGTGGGAGACATTTAGTGAACGCTCTTCAAGCTCACAAACTCTGACCCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431346.6
ENST00000626459.2
CDS-3UTR GCA 90 bp CCCCAACATCTGATGCAGTGTTCCAACCTAGCCTCCTGCTGGAACACTGTGTCACCTGCATGTGGATTTTaGTTGGAGTCATACGAATGG +
Preference number: 4 (lower is better)
Translates to: PQHLMQCSNLASCWNTVSPACGF*LESYEW
Trigger: CCATTCGTATGACTCCAAGCAAAATCCACATGCAGG...TGACACAGTGTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAGATGTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR GCA 90 bp AGACCTTTGACGAGTTACATTGCTCCCGATCTGTTCTGGGTCAGAAGTAAAAGAAGGGGGAGGTGGTGGTaGAGTGTTATCAGGCGACGT +
Preference number: 4 (lower is better)
Translates to: RPLTSYIAPDLFWVRSKRRGRWW*SVIRRR
Trigger: ACGTCGCCTGATAACACTGCACCACCACCTCCCCCT...TCTTTTACTTCTGACCCAGAACAGATCGGGAGCAATGTAACTCGTCAAAGGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp ACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAATGTTAGGGGGAGGTGGTGGTaGAGTGTTATCAGGCGACGT +
Preference number: 4 (lower is better)
Translates to: TNGNWMNNSSIRISWCNVRGRWW*SVIRRR
Trigger: ACGTCGCCTGATAACACTGCACCACCACCTCCCCCT...AACATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAAGCATCCACTGGGCGATaGACAGCAGGACCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKASTGR*TAGPGA
Trigger: GGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGC...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp AATTGGGTCAGAGTTTGTGAGCTTGAAGAGCGTTCACTAAATGTCTCCCACTGCACACTGTGTCAACCCTaGCTCCCTCCTGTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: NWVRVCELEERSLNVSHCTLCQP*LPPVGS
Trigger: AGAACCCACAGGAGGGAGGCAGGGTTGACACAGTGT...GCAGTGGGAGACATTTAGTGAACGCTCTTCAAGCTCACAAACTCTGACCCAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431346.6
CDS-3UTR GCA 90 bp CTTTTTCAGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATCTTGTTCGTAACAAAGCAAGTCAGTaGGACTTGCCAGTGCGACCC +
Preference number: 4 (lower is better)
Translates to: LFQPAGLLDVSRLHHLVRNKASQ*DLPVRP
Trigger: GGGTCGCACTGGCAAGTCGCACTGACTTGCTTTGTT...ACGAACAAGATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCTGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CCA 90 bp GTTCCAGTTGAACTTCCAGGGAAATTCTCTCCTCAAGAACATCCTTTAATTGTTAAGTTTCGGGGGATCTaGGCTGAGCGTGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VPVELPGKFSPQEHPLIVKFRGI*AERGRR
Trigger: GCGGCGGCCACGCTCAGCCCAGATCCCCCGAAACTT...AACAATTAAAGGATGTTCTTGAGGAGAGAATTTCCCTGGAAGTTCAACTGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CGCTGTGCAAACTTGGGCAAGTTGTATAACTTCTCTGTGCTTCAGTTTCTCCATCACTATTCCCACCGCTaGGATGACGGCTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: RCANLGKLYNFSVLQFLHHYSHR*DDGCAS
Trigger: GGAAGCACAGCCGTCATCCCAGCGGTGGGAATAGTG...ATGGAGAAACTGAAGCACAGAGAAGTTATACAACTTGCCCAAGTTTGCACAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CCA 90 bp AGTTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGAAAAGGGAGACCAAAATaGCCCAGGTCCCGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: SSISCMWILLGVIRMGTGKGRPK*PRSRER
Trigger: CCTCTCGCGGGACCTGGGCCATTTTGGTCTCCCTTT...TCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp GTAGAGCTTATGTCAATCTGTAGCAAGTCAACCCCTGCAATCAGCACTACAAACAAAGGGAGACCAAAATaGCCCAGGTCCCGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: VELMSICSKSTPAISTTNKGRPK*PRSRER
Trigger: CCTCTCGCGGGACCTGGGCCATTTTGGTCTCCCTTT...GTTTGTAGTGCTGATTGCAGGGGTTGACTTGCTACAGATTGACATAAGCTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCACTGTTGTCTGGTCCTaGACAGAAGCAGGATGCATG +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLTVVWS*TEAGCM
Trigger: CATGCATCCTGCTTCTGTCCAGGACCAGACAACAGT...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR CCA 90 bp GCCTCCTGCTGGAACACTGTGTCAACCCTGCCTCCCTCCTGTGGGTTCTGCTCTGATCATCATAACTACTaGATTGCCTACGAATTTCAA +
Preference number: 4 (lower is better)
Translates to: ASCWNTVSTLPPSCGFCSDHHNY*IAYEFQ
Trigger: TTGAAATTCGTAGGCAATCCAGTAGTTATGATGATC...AGAGCAGAACCCACAGGAGGGAGGCAGGGTTGACACAGTGTTCCAGCAGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431346.6
CDS-3UTR CCA 90 bp CAACCTAGCCTCCTGCTGGAACACTGTGTCAACCCTGCCTCCCTCCTGTGGGTTCCAAATCAATCAGTTTaGGCATTAAGCTTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: QPSLLLEHCVNPASLLWVPNQSV*ALSFQE
Trigger: TTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG...AACCCACAGGAGGGAGGCAGGGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR CCA 90 bp TCTCCCACTGCTCACTGCTCTGATTCAGCTCAGGCCATGTCTGGTTTAGTGATGAGCTCAGGCCATGTCTaGTTTAGTGATGGCATCGAT +
Preference number: 4 (lower is better)
Translates to: SPTAHCSDSAQAMSGLVMSSGHV*FSDGID
Trigger: ATCGATGCCATCACTAAACCAGACATGGCCTGAGCT...CATCACTAAACCAGACATGGCCTGAGCTGAATCAGAGCAGTGAGCAGTGGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431346.6
ENST00000626459.2
CDS-3UTR CCA 90 bp GCCTCCTGCTGGAACACTGTGTCAACCCTGCCTCCCTCCTGTGGGTTCTGCTCTATGTTAGAATCAAATTaGGTCAGAGTTTGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: ASCWNTVSTLPPSCGFCSMLESN*VRVCEL
Trigger: AAGCTCACAAACTCTGACCCAATTTGATTCTAACAT...AGAGCAGAACCCACAGGAGGGAGGCAGGGTTGACACAGTGTTCCAGCAGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431346.6
CDS-3UTR CCA 90 bp CTGGCTGATCCCCAACATCTGATGCAGTGTTCCAACCTAGCCTCCTGCTGGAACCATGTGGATTTTGCTTaGAGTCATACGAATGGGAAC +
Preference number: 4 (lower is better)
Translates to: LADPQHLMQCSNLASCWNHVDFA*SHTNGN
Trigger: GTTCCCATTCGTATGACTCCAAGCAAAATCCACATG...GTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAGATGTTGGGGATCAGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR CCA 90 bp TCAAATTGGGTCAGAGTTTGTGAGCTTGAAGAGCGTTCACTAAATGTCTCCCACGGCACTGCAGGAGGATaGGCAACAACTCCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: SNWVRVCELEERSLNVSHGTAGG*ATTPAC
Trigger: ACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCC...GTGGGAGACATTTAGTGAACGCTCTTCAAGCTCACAAACTCTGACCCAATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCAACAGGTTTAGGTGGTaGAGCAAGTGGTGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPNRFRW*SKWCCA
Trigger: GGCACAACACCACTTGCTCCACCACCTAAACCTGTT...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp GGTACTAGTGTGAGTTATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGTACGCTGTGCAAACTTaGGCAAGTTGTATAACTTCT +
Preference number: 4 (lower is better)
Translates to: GTSVSYEAIGIHWAMHSRYAVQT*ASCITS
Trigger: AGAAGTTATACAACTTGCCCAAGTTTGCACAGCGTA...CCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCATAACTCACACTAGTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR TCA 90 bp GCTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTCCAGCACCCGCCCGTTaGCCACCACCTTCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: AESSKSISLGIKLSGSFSPAPAR*PPPSWC
Trigger: GCACCAAGAAGGTGGTGGTCAACGGGCGGGTGCTGG...AGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACTGGGGATTGCTGTGGTaGAACTACTGGGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: HFLHVDFAWSHTNGNWMNWGLLW*NYWGCR
Trigger: CCTGCATCCCCAGTAGTTTCACCACAGCAATCCCCA...GTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp ACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAATGTTTGGGGATTGCTGTGGTaGAACTACTGGGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: TNGNWMNNSSIRISWCNVWGLLW*NYWGCR
Trigger: CCTGCATCCCCAGTAGTTTCACCACAGCAATCCCCA...AACATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTCCCACCGCTGGGATaGCGGCTGTGCTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKFPPLG*RLCFLH
Trigger: ATGGAGGAAGCACAGCCGTCATCCCAGCGGTGGGAA...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAAAGGTGGGGAATGCCCTaGCCACACTGCATCACCAGC +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKRWGMP*PHCITS
Trigger: GCTGGTGATGCAGTGTGGTCAGGGCATTCCCCACCT...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR TCA 90 bp GCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCCTCACTGCTTTCAGCAGGAGAGCCTaGATAACCTACCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: AWSHTNGNWMNNSSILTAFSRRA*ITYLTW
Trigger: CCAGGTGAGGTAGGTTATTCAGGCTCTCCTGCTGAA...AGCAGTGAGGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000445570.5
CDS-3UTR TCA 90 bp TGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTTCTTCAGAATGCGGCCACAATaGGAGCAAATCAAGCATCTG +
Preference number: 4 (lower is better)
Translates to: WCCAFAHIGRSTSSCLFFRMRPQ*EQIKHL
Trigger: CAGATGCTTGATTTGCTCTCATTGTGGCCGCATTCT...GAAGAAAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR GCA 90 bp GATGCAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTGATCCCTTTTTCACTTaGCCCCTGCCAGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: DARTAAKTPVFCVCSSTSDPFFT*PLPGGG
Trigger: CCCACCACCTGGCAGGGGGCAAGTGAAAAAGGGATC...AGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTGCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp GCTGATCCCCAACATCTGATGCAGTGTTCCAACCTAGCCTCCTGCTGGAACACTTGGACAGAAGCAGGATaGATGGTTAAAAGAGTACTG +
Preference number: 4 (lower is better)
Translates to: ADPQHLMQCSNLASCWNTWTEAG*MVKRVL
Trigger: CAGTACTCTTTTAACCATGCATCCTGCTTCTGTCCA...AGTGTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAGATGTTGGGGATCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431346.6
CDS-3UTR GCA 90 bp ACGAATGGGAACTGGATGAACAATAGCAGTATCCTCACTGCTCTGATTCAGCTCGCATCGATGGTGACTTaGTTGGAGGAGCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: TNGNWMNNSSILTALIQLASMVT*LEELQQ
Trigger: CTGCTGAAGCTCCTCCAAGCAAGTCACCATCGATGC...GAGCTGAATCAGAGCAGTGAGGATACTGCTATTGTTCATCCAGTTCCCATTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000445570.5
CDS-3UTR GCA 90 bp CAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTGGCCGCATCGATGGTGACTTaGTTGGAGGAGCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QEQQLRHPSFVYVHQLLAASMVT*LEELQQ
Trigger: CTGCTGAAGCTCCTCCAAGCAAGTCACCATCGATGC...GGCCAGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp CATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACTCTCCCACTGCTCACTaGTCTGATTCAGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: HFLHVDFAWSHTNGNWMNSPTAH*SDSAQA
Trigger: GGCCTGAGCTGAATCAGAGCAGTGAGCAGTGGGAGA...GTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431346.6
ENST00000626459.2
CDS-3UTR GCA 90 bp TCTCCCACTGCTCACTGCTCTGATTCAGCTCAGGCCATGTCTGGTTTAGTGATGTTTGACGAGTTACATTaGTCCCGATCTGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: SPTAHCSDSAQAMSGLVMFDELH*SRSVLG
Trigger: ACCCAGAACAGATCGGGAGCAATGTAACTCGTCAAA...CATCACTAAACCAGACATGGCCTGAGCTGAATCAGAGCAGTGAGCAGTGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626459.2
CDS-3UTR GCA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAAGCATCCACTGGGCGATaGACAGCAGGACCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKASTGR*TAGPGA
Trigger: GGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGC...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp GTCTTGGAGGCACTGCAGGAGGATGGGCAACAACTCCAGCCTGTTGTTGTCCTGCCATTTTGCATACTGTaGTTGGTCATATATGACACA +
Preference number: 4 (lower is better)
Translates to: VLEALQEDGQQLQPVVVLPFCIL*LVIYDT
Trigger: TGTGTCATATATGACCAAGCACAGTATGCAAAATGG...CAGGACAACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCCTTCCCGGAAAGTTGTaGGGCTTCGAACCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPLPGKL*GFEPKV
Trigger: AACTTTAGGTTCGAAGCCCCACAACTTTCCGGGAAG...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp CATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAATCCCCCTGCCAGGTGGTaGGGGAATTACACCAGAATA +
Preference number: 4 (lower is better)
Translates to: HTNGNWMNNSSIRISWCNPPARW*GNYTRI
Trigger: TATTCTGGTGTAATTCCCCCACCACCTGGCAGGGGG...ATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp GATGCAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTTTGCCCCCTGCCAGGTaGTGGGGGAATTACACCAGA +
Preference number: 4 (lower is better)
Translates to: DARTAAKTPVFCVCSSTSLPPAR*WGNYTR
Trigger: TCTGGTGTAATTCCCCCACCACCTGGCAGGGGGCAA...AGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTGCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp GATGCAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTCACTATTCCCACCGCTaGGATGACGGCTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: DARTAAKTPVFCVCSSTSHYSHR*DDGCAS
Trigger: GGAAGCACAGCCGTCATCCCAGCGGTGGGAATAGTG...AGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCAGCTCAGGCCATGTCTaGTTTAGTGATGGCATCGAT +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLSSGHV*FSDGID
Trigger: ATCGATGCCATCACTAAACCAGACATGGCCTGAGCT...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp CTGGCTGATCCCCAACATCTGATGCAGTGTTCCAACCTAGCCTCCTGCTGGAACCATACGAATGGGAACTaGATGAACAATAGCAGTATC +
Preference number: 4 (lower is better)
Translates to: LADPQHLMQCSNLASCWNHTNGN*MNNSSI
Trigger: GATACTGCTATTGTTCATCCAGTTCCCATTCGTATG...GTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAGATGTTGGGGATCAGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR CCA 90 bp CATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTTGGAGGGGGAGGTGGTaGTGCAGTGTTATCAGGCGA +
Preference number: 4 (lower is better)
Translates to: HVDFAWSHTNGNWMNNSSWRGRW*CSVIRR
Trigger: TCGCCTGATAACACTGCACCACCACCTCCCCCTCCA...ACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAAGCCATCGGCATCCACTaGGCGATGCACAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKAIGIH*AMHSRT
Trigger: GGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGC...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp CATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAATGCAGATGTACGAGGCTaGACCGTATCATGGCTTACG +
Preference number: 4 (lower is better)
Translates to: HTNGNWMNNSSIRISWCNADVRG*TVSWLT
Trigger: CGTAAGCCATGATACGGTTCAGCCTCGTACATCTGC...ATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp AGGGCTGCTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTCTGACCCAGTTTTCTTaGGGTGGAGGTGGGGAATGC +
Preference number: 4 (lower is better)
Translates to: RAAESSKSISLGIKLSGSLTQFS*GGGGEC
Trigger: GCATTCCCCACCTCCACCTCAAGAAAACTGGGTCAG...ACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAGCAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR TCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCGAGTATCTGCAAAACTaGCCCAGTTTTCTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPEYLQN*PSFLEV
Trigger: CACCTCAAGAAAACTGGGTCAGTTTTGCAGATACTC...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR TCA 90 bp TGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTTCTTCCTAGCAACCACCAGATaGAAAGCAGCACAAAACTCA +
Preference number: 4 (lower is better)
Translates to: WCCAFAHIGRSTSSCLFFLATTR*KAAQNS
Trigger: TGAGTTTTGTGCTGCTTTTCATCTGGTGGTTGCTAG...GAAGAAAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCCTAGCAACCACCAGATaGAAAGCAGCACAAAACTCA +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLLATTR*KAAQNS
Trigger: TGAGTTTTGTGCTGCTTTTCATCTGGTGGTTGCTAG...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp TTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAACCTACCTCACCTGGCTaGTCCCCAACATCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: FPACGFCLESYEWELDEQPTSPG*SPTSAE
Trigger: TTCAGCAGATGTTGGGGATCAGCCAGGTGAGGTAGG...TTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp AGACCTTTGACGAGTTACATTGCTCCCGATCTGTTCTGGGTCAGAAGTAAAAGATTCAGCAGGAGAGCCTaGATAACCTACCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: RPLTSYIAPDLFWVRSKRFSRRA*ITYLTW
Trigger: CCAGGTGAGGTAGGTTATTCAGGCTCTCCTGCTGAA...TCTTTTACTTCTGACCCAGAACAGATCGGGAGCAATGTAACTCGTCAAAGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp TTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGGGTGAGGTACTAGTGTaGGTTATGAGGCCATCGGCA +
Preference number: 4 (lower is better)
Translates to: FHFLHVDFAWSHTNGNWMGEVLV*VMRPSA
Trigger: TGCCGATGGCCTCATAACTCACACTAGTACCTCACC...CATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp AGACCTTTGACGAGTTACATTGCTCCCGATCTGTTCTGGGTCAGAAGTAAAAGAGGTGAGGTACTAGTGTaGGTTATGAGGCCATCGGCA +
Preference number: 4 (lower is better)
Translates to: RPLTSYIAPDLFWVRSKRGEVLV*VMRPSA
Trigger: TGCCGATGGCCTCATAACTCACACTAGTACCTCACC...TCTTTTACTTCTGACCCAGAACAGATCGGGAGCAATGTAACTCGTCAAAGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp TCTCCCACTGCTCACTGCTCTGATTCAGCTCAGGCCATGTCTGGTTTAGTGATGCAATTGGCTTATAGGTaGGAGAATGGTCGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SPTAHCSDSAQAMSGLVMQLAYR*ENGRSC
Trigger: ACAACTTCGACCATTCTCTCACCTATAAGCCAATTG...CATCACTAAACCAGACATGGCCTGAGCTGAATCAGAGCAGTGAGCAGTGGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626459.2
CDS-3UTR TCA 90 bp CTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCGTATCCTCACTGCTCTaGTTCAGCTCAGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: LHVDFAWSHTNGNWMNNSVSSLL*FSSGHV
Trigger: GACATGGCCTGAGCTGAATCAGAGCAGTGAGGATAC...GCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000445570.5
CDS-3UTR TCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCCAGAAAAACAGGTGTTaGGTAGTTTCCTGGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPQKNRC*VVSWAF
Trigger: AAAGGCCCAGGAAACTACTCAACACCTGTTTTTCTG...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR GCA 90 bp ACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAATGTTCCACCACCTTCTTGGTaGTCTCAATGTCGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: TNGNWMNNSSIRISWCNVPPPSW*SQCRSR
Trigger: CCTACTGCGACATTGAGAGCACCAAGAAGGTGGTGG...AACATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp AGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAGGTTCCTGTGCATCTaGAGATGTACGAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: SHTNGNWMNNSSIRISWCRFLCI*RCTRLN
Trigger: GTTCAGCCTCGTACATCTGCAGATGCACAGGAACCT...GCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp CATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACGGATGCAGGTTCCTGTaGATCTGCAGATGTACGAGG +
Preference number: 4 (lower is better)
Translates to: HFLHVDFAWSHTNGNWMNGCRFL*ICRCTR
Trigger: CCTCGTACATCTGCAGATGCACAGGAACCTGCATCC...GTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCCCTGCATGTGGATTTTaGTTGGAGTCATACGAATGG +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPPACGF*LESYEW
Trigger: CCATTCGTATGACTCCAAGCAAAATCCACATGCAGG...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCTTTGACGAGTTACATTaGTCCCGATCTGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLFDELH*SRSVLG
Trigger: ACCCAGAACAGATCGGGAGCAATGTAACTCGTCAAA...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp AGTTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGAGTGGTGTTGTGCCTTTaGTCACATTGGCAGGAGCAC +
Preference number: 4 (lower is better)
Translates to: SSISCMWILLGVIRMGTGVVLCL*SHWQEH
Trigger: GTGCTCCTGCCAATGTGAGCAAAGGCACAACACCAC...TCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp GGTACTAGTGTGAGTTATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGTCCTTTAATTGTTGCTaGAATTCGCTATTCAATCTG +
Preference number: 4 (lower is better)
Translates to: GTSVSYEAIGIHWAMHSRSFNCC*NSLFNL
Trigger: CAGATTGAATAGCGAATTGCAGCAACAATTAAAGGA...CCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCATAACTCACACTAGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp TCAAATTGGGTCAGAGTTTGTGAGCTTGAAGAGCGTTCACTAAATGTCTCCCACTCCAACCTAGCCTCCTaGTGGAACACTGTGTCAACC +
Preference number: 4 (lower is better)
Translates to: SNWVRVCELEERSLNVSHSNLAS*WNTVST
Trigger: GGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTGGA...GTGGGAGACATTTAGTGAACGCTCTTCAAGCTCACAAACTCTGACCCAATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431346.6
CDS-3UTR GCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCCAGAAAAGGTGGGTGTaGCAACAAACACAATCTACC +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPQKRWV*QQTQST
Trigger: GGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTG...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp CTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCACCACAAGACAGAACTaGCAATCAGACACCCCCGCT +
Preference number: 4 (lower is better)
Translates to: LHVDFAWSHTNGNWMNNSTTRQN*QSDTPA
Trigger: AGCGGGGGTGTCTGATTGGCAGTTCTGTCTTGTGGT...GCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCGAATATGAGGCTGCATaGCGAGATTCCTGTTCATTC +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLEYEAA*RDSCSF
Trigger: GAATGAACAGGAATCTCGCCATGCAGCCTCATATTC...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAAAAAGGGAGACCAAAATaGCCCAGGTCCCGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKKGRPK*PRSRER
Trigger: CCTCTCGCGGGACCTGGGCCATTTTGGTCTCCCTTT...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp GGTACTAGTGTGAGTTATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGATGTTAGAATCAAATTaGGTCAGAGTTTGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: GTSVSYEAIGIHWAMHSRMLESN*VRVCEL
Trigger: AAGCTCACAAACTCTGACCCAATTTGATTCTAACAT...CCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCATAACTCACACTAGTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp GCTGATCCCCAACATCTGATGCAGTGTTCCAACCTAGCCTCCTGCTGGAACACTTCCATTTCCTGCATGTaGATTTTGCTTGGAGTCATA +
Preference number: 4 (lower is better)
Translates to: ADPQHLMQCSNLASCWNTSISCM*ILLGVI
Trigger: TATGACTCCAAGCAAAATCCACATGCAGGAAATGGA...AGTGTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAGATGTTGGGGATCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431346.6
CDS-3UTR TCA 90 bp GCTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTTTCCCACCGCTGGGATaGCGGCTGTGCTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: AESSKSISLGIKLSGSFSFPPLG*RLCFLH
Trigger: ATGGAGGAAGCACAGCCGTCATCCCAGCGGTGGGAA...AGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCATCCCCAACATCTGCTaGATCTTCCAAATCAATCAG +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPIPNIC*IFQINQ
Trigger: CTGATTGATTTGGAAGATTCAGCAGATGTTGGGGAT...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAACCTACCTCACCTGGCTaGTCCCCAACATCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKPTSPG*SPTSAE
Trigger: TTCAGCAGATGTTGGGGATCAGCCAGGTGAGGTAGG...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp GATGCAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTTTCAGCAGGAGAGCCTaGATAACCTACCTCACCTGG +
Preference number: 4 (lower is better)
Translates to: DARTAAKTPVFCVCSSTSFSRRA*ITYLTW
Trigger: CCAGGTGAGGTAGGTTATTCAGGCTCTCCTGCTGAA...AGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAACACTGCTCACTGCTCTaGTTCAGCTCAGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKHCSLL*FSSGHV
Trigger: GACATGGCCTGAGCTGAATCAGAGCAGTGAGCAGTG...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp TCAATCTGTAGCAAGTCAACCCCTGCAATCAGCACTACAAACAGGGCCATGCCACTAGTGGGATTTGTATaGTCGCTGCCAGTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: SICSKSTPAISTTNRAMPLVGFV*SLPVLL
Trigger: TAAAAGAACTGGCAGCGATCATACAAATCCCACTAG...TGGCATGGCCCTGTTTGTAGTGCTGATTGCAGGGGTTGACTTGCTACAGATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR TCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCCAATTGGCTTATAGGTaGGAGAATGGTCGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPQLAYR*ENGRSC
Trigger: ACAACTTCGACCATTCTCTCACCTATAAGCCAATTG...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp GTAGAGCTTATGTCAATCTGTAGCAAGTCAACCCCTGCAATCAGCACTACAAACAGTCTGAGAGTTCCCTaGTTGTGCTTCACCAAAGGG +
Preference number: 4 (lower is better)
Translates to: VELMSICSKSTPAISTTNSLRVP*LCFTKG
Trigger: CCCTTTGGTGAAGCACAATCAGGGAACTCTCAGACT...GTTTGTAGTGCTGATTGCAGGGGTTGACTTGCTACAGATTGACATAAGCTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR TCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCCAACTAAAGCCATACTaGAAGCCACTTGGAAACTTC +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLQLKPY*KPLGNF
Trigger: GAAGTTTCCAAGTGGCTTTCAGTATGGCTTTAGTTG...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR TCA 90 bp TTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAACTAACCTCACTGCTCTaGTTCAGCTCAGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: FPACGFCLESYEWELDEQLTSLL*FSSGHV
Trigger: GACATGGCCTGAGCTGAATCAGAGCAGTGAGGTTAG...TTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR TCA 90 bp CGCTGTGCAAACTTGGGCAAGTTGTATAACTTCTCTGTGCTTCAGTTTCTCCATAATGTCTCCCACTGCTaGACAGACAGAGGAGAGACA +
Preference number: 4 (lower is better)
Translates to: RCANLGKLYNFSVLQFLHNVSHC*TDRGET
Trigger: TGTCTCTCCTCTGTCTGTTCAGCAGTGGGAGACATT...ATGGAGAAACTGAAGCACAGAGAAGTTATACAACTTGCCCAAGTTTGCACAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR GCA 90 bp AGTTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGAAGGTTCCTGTGCATCTaGAGATGTACGAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: SSISCMWILLGVIRMGTGRFLCI*RCTRLN
Trigger: GTTCAGCCTCGTACATCTGCAGATGCACAGGAACCT...TCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp ATGTCTCCCACTGCTCACTGCTCTGATTCAGCTCAGGCCATGTCTGGTTTAGTGCTCATCCAGTGTCAATaGACCATCTTTATCAAAGTC +
Preference number: 4 (lower is better)
Translates to: MSPTAHCSDSAQAMSGLVLIQCQ*TIFIKV
Trigger: GACTTTGATAAAGATGGTGCATTGACACTGGATGAG...CACTAAACCAGACATGGCCTGAGCTGAATCAGAGCAGTGAGCAGTGGGAGACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431346.6
ENST00000626459.2
CDS-3UTR GCA 90 bp TTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAAGCATCGATGGTGACTTaGTTGGAGGAGCTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: FPACGFCLESYEWELDEQASMVT*LEELQQ
Trigger: CTGCTGAAGCTCCTCCAAGCAAGTCACCATCGATGC...TTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000431346.6
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp CTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATGCATCCACTGGGCGATaGACAGCAGGACCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LPNQSVWALSFQEVFLVNASTGR*TAGPGA
Trigger: GGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGC...ATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp AGACCTTTGACGAGTTACATTGCTCCCGATCTGTTCTGGGTCAGAAGTAAAAGAGAGCAAGTGGTGTTGTaGCTTTGCTCACATTGGCAG +
Preference number: 4 (lower is better)
Translates to: RPLTSYIAPDLFWVRSKREQVVL*LCSHWQ
Trigger: CTGCCAATGTGAGCAAAGGCACAACACCACTTGCTC...TCTTTTACTTCTGACCCAGAACAGATCGGGAGCAATGTAACTCGTCAAAGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp AGGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCGTTCACAAAGAAAACTaGTCTAATAGGCTACAGCAA +
Preference number: 4 (lower is better)
Translates to: RFRWWSKWCCAFAHIGRSVHKEN*SNRLQQ
Trigger: TTGCTGTAGCCTATTAGAGCAGTTTTCTTTGTGAAC...GCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CCA 90 bp AAAACAAGTATGTTCACAGTTAACGGCAATTGGCTTATAGGTGAGAGAATGGTCCACTATTCCCACCGCTaGGATGACGGCTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: KTSMFTVNGNWLIGERMVHYSHR*DDGCAS
Trigger: GGAAGCACAGCCGTCATCCCAGCGGTGGGAATAGTG...GACCATTCTCTCACCTATAAGCCAATTGCCGTTAACTGTGAACATACTTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp ACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAATGTTACTGTTGTCTGGTCCTaGACAGAAGCAGGATGCATG +
Preference number: 4 (lower is better)
Translates to: TNGNWMNNSSIRISWCNVTVVWS*TEAGCM
Trigger: CATGCATCCTGCTTCTGTCCAGGACCAGACAACAGT...AACATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431346.6
CDS-3UTR CCA 90 bp TTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGATAACCTACCTCACCTaGCTGATCCCCAACATCTGC +
Preference number: 4 (lower is better)
Translates to: FHFLHVDFAWSHTNGNWMITYLT*LIPNIC
Trigger: GCAGATGTTGGGGATCAGCCAGGTGAGGTAGGTTAT...CATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCATAACCTACCTCACCTaGCTGATCCCCAACATCTGC +
Preference number: 4 (lower is better)
Translates to: LHVDFAWSHTNGNWMNNSITYLT*LIPNIC
Trigger: GCAGATGTTGGGGATCAGCCAGGTGAGGTAGGTTAT...GCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp ACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAATGTTATAACCTACCTCACCTaGCTGATCCCCAACATCTGC +
Preference number: 4 (lower is better)
Translates to: TNGNWMNNSSIRISWCNVITYLT*LIPNIC
Trigger: GCAGATGTTGGGGATCAGCCAGGTGAGGTAGGTTAT...AACATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTGGCCAGCTCAGGCCATGTCTaGTTTAGTGATGGCATCGAT +
Preference number: 4 (lower is better)
Translates to: QEQQLRHPSFVYVHQLLASSGHV*FSDGID
Trigger: ATCGATGCCATCACTAAACCAGACATGGCCTGAGCT...GGCCAGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCCATGTGGATTTTGCTTaGAGTCATACGAATGGGAAC +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLHVDFA*SHTNGN
Trigger: GTTCCCATTCGTATGACTCCAAGCAAAATCCACATG...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp TTATTTTCTTCTAAAAGGTCAGATGGTTTCACAAGTAATGGGCTAGTGGGATTTGCCATCGGCATCCACTaGGCGATGCACAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: LFSSKRSDGFTSNGLVGFAIGIH*AMHSRT
Trigger: GGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGC...AAATCCCACTAGCCCATTACTTGTGAAACCATCTGACCTTTTAGAAGAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp TCTCCCACTGCTCACTGCTCTGATTCAGCTCAGGCCATGTCTGGTTTAGTGATGGAAATCTGCAAAATTTaGTTGCTCTGGTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPTAHCSDSAQAMSGLVMEICKI*LLWYLL
Trigger: CAGCAGATACCAGAGCAACCAAATTTTGCAGATTTC...CATCACTAAACCAGACATGGCCTGAGCTGAATCAGAGCAGTGAGCAGTGGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626459.2
CDS-3UTR CCA 90 bp ACGAATGGGAACTGGATGAACAATAGCAGTATCCTCACTGCTCTGATTCAGCTCTCGAACAGGTTTAGGTaGTGGAGCAAGTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: TNGNWMNNSSILTALIQLSNRFR*WSKWCC
Trigger: ACAACACCACTTGCTCCACCACCTAAACCTGTTCGA...GAGCTGAATCAGAGCAGTGAGGATACTGCTATTGTTCATCCAGTTCCCATTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445570.5
CDS-3UTR CCA 90 bp TTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAAGGGCTCACAGCTGTaGAACCAGACTACTGGAATC +
Preference number: 4 (lower is better)
Translates to: FHFLHVDFAWSHTNGNWMKGSQL*NQTTGI
Trigger: GATTCCAGTAGTCTGGTTCCACAGCTGTGAGCCCTT...CATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR TCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCCCAGAATACGACCCTTaGTTTTCAGAATCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPPEYDP*FSESEE
Trigger: TTCTTCAGATTCTGAAAATCAAGGGTCGTATTCTGG...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAAGCAGATGTACGAGGCTaGACCGTATCATGGCTTACG +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKADVRG*TVSWLT
Trigger: CGTAAGCCATGATACGGTTCAGCCTCGTACATCTGC...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp CCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATTTCCCACCGCTGGGATaGCGGCTGTGCTTCCTCCAT +
Preference number: 4 (lower is better)
Translates to: PNQSVWALSFQEVFLVNHFPPLG*RLCFLH
Trigger: ATGGAGGAAGCACAGCCGTCATCCCAGCGGTGGGAA...ATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATAGGTGGGGAATGCCCTaGCCACACTGCATCACCAGC +
Preference number: 4 (lower is better)
Translates to: LPNQSVWALSFQEVFLVNRWGMP*PHCITS
Trigger: GCTGGTGATGCAGTGTGGTCAGGGCATTCCCCACCT...ATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR TCA 90 bp GATGCAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTGATGATGATCTAGAATaGGAGGGCTGTGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: DARTAAKTPVFCVCSSTSDDDLE*EGCGLG
Trigger: TCCAAGGCCACAGCCCTCTCATTCTAGATCATCATC...AGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp GGGATTTGTATGATCGCTGCCAGTTCTTTTAAGTTCCATTTCCTGCATGTGGATGATGATGATCTAGAATaGGAGGGCTGTGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: GICMIAASSFKFHFLHVDDDDLE*EGCGLG
Trigger: TCCAAGGCCACAGCCCTCTCATTCTAGATCATCATC...ATCCACATGCAGGAAATGGAACTTAAAAGAACTGGCAGCGATCATACAAATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTGGCCTGGTATCTGCTGAGGTaGGGTACTAGTGTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: QEQQLRHPSFVYVHQLLAWYLLR*GTSVSY
Trigger: ATAACTCACACTAGTACCTCACCTCAGCAGATACCA...GGCCAGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp GATCAGAAGCTTTTTCAGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATCAATTGGCTTATAGGTaGGAGAATGGTCGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: DQKLFQPAGLLDVSRLHHQLAYR*ENGRSC
Trigger: ACAACTTCGACCATTCTCTCACCTATAAGCCAATTG...ATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCTGAAAAAGCTTCTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCCAGAAAACGCCATCCTaGCCTTTTTATTGTCGAAAT +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPQKTPS*PFYCRN
Trigger: ATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTG...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCAACAGCATATTGTCCTaGATAAGGCATACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLNSILS*IRHTPE
Trigger: TTCTGGAGTATGCCTTATTCAGGACAATATGCTGTT...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp TCAAATTGGGTCAGAGTTTGTGAGCTTGAAGAGCGTTCACTAAATGTCTCCCACGTCCCTCACTGGATATaGGATCTTGGCCAAGTCATT +
Preference number: 4 (lower is better)
Translates to: SNWVRVCELEERSLNVSHVPHWI*DLGQVI
Trigger: AATGACTTGGCCAAGATCTCATATCCAGTGAGGGAC...GTGGGAGACATTTAGTGAACGCTCTTCAAGCTCACAAACTCTGACCCAATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR TCA 90 bp GATGCAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTCCTTGTTTACAGGACTaGGAAGGCAGTGTGACACAG +
Preference number: 4 (lower is better)
Translates to: DARTAAKTPVFCVCSSTSPCLQD*EGSVTQ
Trigger: CTGTGTCACACTGCCTTCTCAGTCCTGTAAACAAGG...AGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR GCA 90 bp TGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTTCTTCATAACCAAGTCTTGTTaGACCACAAAGCTCCATGAT +
Preference number: 4 (lower is better)
Translates to: WCCAFAHIGRSTSSCLFFITKSC*TTKLHD
Trigger: ATCATGGAGCTTTGTGGTGCAACAAGACTTGGTTAT...GAAGAAAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp CAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATAGCCATGGTGGAGGTGGGGAATaGCCTGACCACACTGCATCA +
Preference number: 4 (lower is better)
Translates to: QSVWALSFQEVFLVNHSHGGGGE*PDHTAS
Trigger: TGATGCAGTGTGGTCAGGGCATTCCCCACCTCCACC...ATGGCTATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR GCA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAATCTCCCACTGCTCACTaGTCTGATTCAGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKSPTAH*SDSAQA
Trigger: GGCCTGAGCTGAATCAGAGCAGTGAGCAGTGGGAGA...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp TACTGTAACCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTAAGGGGGAGGTGGTGGTaGAGTGTTATCAGGCGACGT +
Preference number: 4 (lower is better)
Translates to: YCNHLLQYYQKRISPMNLRGRWW*SVIRRR
Trigger: ACGTCGCCTGATAACACTGCACCACCACCTCCCCCT...TAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGGTTACAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR GCA 90 bp GCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTAAACTGACTGAAATCTaGAAAATTTGGTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ASGVVPLLTLAGALAAVFKLTEI*KIWLLW
Trigger: CCAGAGCAACCAAATTTTGCAGATTTCAGTCAGTTT...AAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp TACTGTAACCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTATTGCCCCCTGCCAGGTaGTGGGGGAATTACACCAGA +
Preference number: 4 (lower is better)
Translates to: YCNHLLQYYQKRISPMNLLPPAR*WGNYTR
Trigger: TCTGGTGTAATTCCCCCACCACCTGGCAGGGGGCAA...TAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGGTTACAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR CCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTGGTTAAAAGAGTACTaGTTGGTGGAGTATCTGCAA +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPWLKEY*LVEYLQ
Trigger: TTGCAGATACTCCACCAACCAGTACTCTTTTAACCA...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR CCA 90 bp TTCTGCTCTGCCCCTGACATCATCAGAGCATCAGGGCTGCTGAATCTTCCAAATTGGTTAAAAGAGTACTaGTTGGTGGAGTATCTGCAA +
Preference number: 4 (lower is better)
Translates to: FCSAPDIIRASGLLNLPNWLKEY*LVEYLQ
Trigger: TTGCAGATACTCCACCAACCAGTACTCTTTTAACCA...ATTTGGAAGATTCAGCAGCCCTGATGCTCTGATGATGTCAGGGGCAGAGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR CCA 90 bp TCAGGGCTGCTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAACTGTTGTCTGGTCCTaGACAGAAGCAGGATGCATG +
Preference number: 4 (lower is better)
Translates to: SGLLNLPNQSVWALSFQETVVWS*TEAGCM
Trigger: CATGCATCCTGCTTCTGTCCAGGACCAGACAACAGT...TTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAGCAGCCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR CCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCCATTTCCTGCATGTaGATTTTGCTTGGAGTCATA +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPSISCM*ILLGVI
Trigger: TATGACTCCAAGCAAAATCCACATGCAGGAAATGGA...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp AGACCTTTGACGAGTTACATTGCTCCCGATCTGTTCTGGGTCAGAAGTAAAAGAGCTCCCGATCTGTTCTaGGTCAGAAGTAAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: RPLTSYIAPDLFWVRSKRAPDLF*VRSKRV
Trigger: GACTCTTTTACTTCTGACCCAGAACAGATCGGGAGC...TCTTTTACTTCTGACCCAGAACAGATCGGGAGCAATGTAACTCGTCAAAGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATAGAATGAGAGGGCTGTaGCCTTGGAGGGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNRMRGL*PWRGRW
Trigger: CCACCTCCCCCTCCAAGGCCACAGCCCTCTCATTCT...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp TTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAAAACAGGTTTAGGTGGTaGAGCAAGTGGTGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: FPACGFCLESYEWELDEQNRFRW*SKWCCA
Trigger: GGCACAACACCACTTGCTCCACCACCTAAACCTGTT...TTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCATTCGCTATTCAATCTaGCCAAAACGGTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLIRYSI*PKRCWF
Trigger: AAACCAACACCGTTTTGGCCAGATTGAATAGCGAAT...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp ATCAGAGCATCAGGGCTGCTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCAATGGCAGTTGTAGCTaGTGCTACAGTTCGTACTGT +
Preference number: 4 (lower is better)
Translates to: IRASGLLNLPNQSVWALSNGSCS*CYSSYC
Trigger: ACAGTACGAACTGTAGCATCAGCTACAACTGCCATT...GCTTAATGCCCAAACTGATTGATTTGGAAGATTCAGCAGCCCTGATGCTCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR TCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCGAGAGTTCCCAAATATaGGAAAGTTCAAGAATAGGA +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLESSQI*ESSRIG
Trigger: TCCTATTCTTGAACTTTCTCATATTTGGGAACTCTC...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR TCA 90 bp TTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGCTAGCAACCACCAGATaGAAAGCAGCACAAAACTCA +
Preference number: 4 (lower is better)
Translates to: FHFLHVDFAWSHTNGNWMLATTR*KAAQNS
Trigger: TGAGTTTTGTGCTGCTTTTCATCTGGTGGTTGCTAG...CATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000431346.6
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp AGACCTTTGACGAGTTACATTGCTCCCGATCTGTTCTGGGTCAGAAGTAAAAGACTAGCAACCACCAGATaGAAAGCAGCACAAAACTCA +
Preference number: 4 (lower is better)
Translates to: RPLTSYIAPDLFWVRSKRLATTR*KAAQNS
Trigger: TGAGTTTTGTGCTGCTTTTCATCTGGTGGTTGCTAG...TCTTTTACTTCTGACCCAGAACAGATCGGGAGCAATGTAACTCGTCAAAGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp AATTGGGTCAGAGTTTGTGAGCTTGAAGAGCGTTCACTAAATGTCTCCCACTGCATCCCCAACATCTGCTaGATCTTCCAAATCAATCAG +
Preference number: 4 (lower is better)
Translates to: NWVRVCELEERSLNVSHCIPNIC*IFQINQ
Trigger: CTGATTGATTTGGAAGATTCAGCAGATGTTGGGGAT...GCAGTGGGAGACATTTAGTGAACGCTCTTCAAGCTCACAAACTCTGACCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCCGTCTAATTGATGCCTaGATAGCTTTCTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPRLIDA*IAFLSF
Trigger: GAAAGATAAGAAAGCTATTCAGGCATCAATTAGACG...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp CAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTGGCCCAATTGGCTTATAGGTaGGAGAATGGTCGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: QEQQLRHPSFVYVHQLLAQLAYR*ENGRSC
Trigger: ACAACTTCGACCATTCTCTCACCTATAAGCCAATTG...GGCCAGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CTTTTTCAGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATCTTGTTCGTAGAAGTAAAAGAGTCTaGACTACTGTAACCATCTGC +
Preference number: 4 (lower is better)
Translates to: LFQPAGLLDVSRLHHLVRRSKRV*TTVTIC
Trigger: GCAGATGGTTACAGTAGTTCAGACTCTTTTACTTCT...ACGAACAAGATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCTGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp GCTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGTTCTGCTCTGCCCCTaGCATCATCAGAGCATCAGG +
Preference number: 4 (lower is better)
Translates to: AESSKSISLGIKLSGSFSVLLCP*HHQSIR
Trigger: CCTGATGCTCTGATGATGTCAGGGGCAGAGCAGAAC...AGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR TCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCGTATTTGTCACAAGTTaGCATGTAAAAGAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLVFVTS*HVKEAS
Trigger: TGAAGCCTCTTTTACATGTCAACTTGTGACAAATAC...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp TTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAACTGGAAGAGACAGACTaGAATTGCCCTCTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: FPACGFCLESYEWELDEQLEETD*NCPLWN
Trigger: GTTCCAAAGAGGGCAATTTCAGTCTGTCTCTTCCAG...TTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR TCA 90 bp GGGATTTGTATGATCGCTGCCAGTTCTTTTAAGTTCCATTTCCTGCATGTGGATCCTCTTCCCTTATTCTaGTCAGTGGCCCTTTTGATG +
Preference number: 4 (lower is better)
Translates to: GICMIAASSFKFHFLHVDPLPLF*SVALLM
Trigger: CATCAAAAGGGCCACTGATCAGAATAAGGGAAGAGG...ATCCACATGCAGGAAATGGAACTTAAAAGAACTGGCAGCGATCATACAAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR GCA 90 bp AAAACAAGTATGTTCACAGTTAACGGCAATTGGCTTATAGGTGAGAGAATGGTCCCACCACCTTCTTGGTaGTCTCAATGTCGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: KTSMFTVNGNWLIGERMVPPPSW*SQCRSR
Trigger: CCTACTGCGACATTGAGAGCACCAAGAAGGTGGTGG...GACCATTCTCTCACCTATAAGCCAATTGCCGTTAACTGTGAACATACTTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp CTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATGATCCCTTTTTCACTTaGCCCCTGCCAGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LPNQSVWALSFQEVFLVNDPFFT*PLPGGG
Trigger: CCCACCACCTGGCAGGGGGCAAGTGAAAAAGGGATC...ATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAAAGGTTCCTGTGCATCTaGAGATGTACGAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKRFLCI*RCTRLN
Trigger: GTTCAGCCTCGTACATCTGCAGATGCACAGGAACCT...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp AATTGGCTTATAGGTGAGAGAATGGTCGAAGTTGTTCCAGTTGAACTTCCAGGGTTTGACGAGTTACATTaGTCCCGATCTGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: NWLIGERMVEVVPVELPGFDELH*SRSVLG
Trigger: ACCCAGAACAGATCGGGAGCAATGTAACTCGTCAAA...CCCTGGAAGTTCAACTGGAACAACTTCGACCATTCTCTCACCTATAAGCCAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAAGAGCAAGTGGTGTTGTaGCTTTGCTCACATTGGCAG +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKEQVVL*LCSHWQ
Trigger: CTGCCAATGTGAGCAAAGGCACAACACCACTTGCTC...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp GATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCCTCCTTCCCGGAAAGTTGTaGGGCTTCGAACCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: DFAWSHTNGNWMNNSSILLPGKL*GFEPKV
Trigger: AACTTTAGGTTCGAAGCCCCACAACTTTCCGGGAAG...GAGGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445570.5
CDS-3UTR CCA 90 bp TACTGTAACCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTACCCCCTGCCAGGTGGTaGGGGAATTACACCAGAATA +
Preference number: 4 (lower is better)
Translates to: YCNHLLQYYQKRISPMNLPPARW*GNYTRI
Trigger: TATTCTGGTGTAATTCCCCCACCACCTGGCAGGGGG...TAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGGTTACAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR CCA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATAAAGGGAGACCAAAATaGCCCAGGTCCCGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNKGRPK*PRSRER
Trigger: CCTCTCGCGGGACCTGGGCCATTTTGGTCTCCCTTT...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCAGTATCAGGATCAGCTaGTGCAATGTTAGAATCAAA +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLSIRIS*CNVRIK
Trigger: TTTGATTCTAACATTGCACCAGCTGATCCTGATACT...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp AGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCCATGTGGATTTTGCTTaGAGTCATACGAATGGGAAC +
Preference number: 4 (lower is better)
Translates to: SHTNGNWMNNSSIRISWCHVDFA*SHTNGN
Trigger: GTTCCCATTCGTATGACTCCAAGCAAAATCCACATG...GCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431346.6
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATTGGAGGGGGAGGTGGTaGTGCAGTGTTATCAGGCGA +
Preference number: 4 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNWRGRW*CSVIRR
Trigger: TCGCCTGATAACACTGCACCACCACCTCCCCCTCCA...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp AACCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTATCTTATGGCACTGCAGGAGGATaGGCAACAACTCCAGCCTGT +
Preference number: 4 (lower is better)
Translates to: NHLLQYYQKRISPMNLSYGTAGG*ATTPAC
Trigger: ACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCC...ATAAGATAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CTTTTTCAGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATCTTGTTCGTATTCGCTATTCAATCTaGCCAAAACGGTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LFQPAGLLDVSRLHHLVRIRYSI*PKRCWF
Trigger: AAACCAACACCGTTTTGGCCAGATTGAATAGCGAAT...ACGAACAAGATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCTGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCATACTGAAAGCCACTTaGAAACTTCAGCTGATGTAT +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPILKAT*KLQLMY
Trigger: ATACATCAGCTGAAGTTTCCAAGTGGCTTTCAGTAT...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR CCA 90 bp CTGGAATCCCAGTTACGCTGTGCAAACTTGGGCAAGTTGTATAACTTCTCTGTGGTGACACAGTGGATGTaGCAGTTGACTAGATATCAA +
Preference number: 4 (lower is better)
Translates to: LESQLRCANLGKLYNFSVVTQWM*QLTRYQ
Trigger: TTGATATCTAGTCAACTGCCACATCCACTGTGTCAC...CACAGAGAAGTTATACAACTTGCCCAAGTTTGCACAGCGTAACTGGGATTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR CAA 72 bp ACCAGACTACTGGAATCCCAGTTACGCTGTGCAAACTaGGGCAAGTTGTATAACTTCTCTGTGCTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: TRLLESQLRCAN*GKLYNFSVLQF
Trigger: AAACTGAAGCACAGAGAAGTTATACAACTTGCCCAAGTTTGCACAGCGTAACTGGGATTCCAGTAGTCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR TCA 90 bp CAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTGGCCCCAGAATACGACCCTTaGTTTTCAGAATCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: QEQQLRHPSFVYVHQLLAPEYDP*FSESEE
Trigger: TTCTTCAGATTCTGAAAATCAAGGGTCGTATTCTGG...GGCCAGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATTGGGGATTGCTGTGGTaGAACTACTGGGGATGCAGG +
Preference number: 4 (lower is better)
Translates to: PNQSVWALSFQEVFLVNHWGLLW*NYWGCR
Trigger: CCTGCATCCCCAGTAGTTTCACCACAGCAATCCCCA...ATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp AATTGGCTTATAGGTGAGAGAATGGTCGAAGTTGTTCCAGTTGAACTTCCAGGGATCCCCAACATCTGCTaGATCTTCCAAATCAATCAG +
Preference number: 4 (lower is better)
Translates to: NWLIGERMVEVVPVELPGIPNIC*IFQINQ
Trigger: CTGATTGATTTGGAAGATTCAGCAGATGTTGGGGAT...CCCTGGAAGTTCAACTGGAACAACTTCGACCATTCTCTCACCTATAAGCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp AATTGGCTTATAGGTGAGAGAATGGTCGAAGTTGTTCCAGTTGAACTTCCAGGGCTAGTGGGATTTGTATaGTCGCTGCCAGTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: NWLIGERMVEVVPVELPGLVGFV*SLPVLL
Trigger: TAAAAGAACTGGCAGCGATCATACAAATCCCACTAG...CCCTGGAAGTTCAACTGGAACAACTTCGACCATTCTCTCACCTATAAGCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAAATCAGGCGACGTTCCTaGATGAGACCTTTGACGAGT +
Preference number: 4 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKIRRRS*MRPLTS
Trigger: ACTCGTCAAAGGTCTCATTCAGGAACGTCGCCTGAT...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp CTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGGTGAGGTACTAGTGTaGGTTATGAGGCCATCGGCA +
Preference number: 4 (lower is better)
Translates to: LNLPNQSVWALSFQEVFLGEVLV*VMRPSA
Trigger: TGCCGATGGCCTCATAACTCACACTAGTACCTCACC...CAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp GATGCAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTTGGTATCTGCTGAGGTaGGGTACTAGTGTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: DARTAAKTPVFCVCSSTSWYLLR*GTSVSY
Trigger: ATAACTCACACTAGTACCTCACCTCAGCAGATACCA...AGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp AGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCATCTTTATCAAAGTCTaGGAGTTCCCTGATTGTGCT +
Preference number: 4 (lower is better)
Translates to: SHTNGNWMNNSSIRISWCIFIKV*EFPDCA
Trigger: AGCACAATCAGGGAACTCTCAGACTTTGATAAAGAT...GCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp TTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAGTGGATGTGGCAGTTaGCTAGATATCAAAGGACTT +
Preference number: 4 (lower is better)
Translates to: FHFLHVDFAWSHTNGNWMSGCGS*LDIKGL
Trigger: AAGTCCTTTGATATCTAGTCAACTGCCACATCCACT...CATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR TCA 90 bp CATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACGTAGGATGGATGGTGTaGTGTTATAATGTCTCAGAC +
Preference number: 4 (lower is better)
Translates to: HFLHVDFAWSHTNGNWMNVGWMV*CYNVSD
Trigger: GTCTGAGACATTATAACATCACACCATCCATCCTAC...GTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR TCA 90 bp CATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTGCGACCCCTGAAAGATaGTTCTATTATGTACGTGCA +
Preference number: 4 (lower is better)
Translates to: HVDFAWSHTNGNWMNNSSATPER*FYYVRA
Trigger: TGCACGTACATAATAGAATCATCTTTCAGGGGTCGC...ACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR GCA 90 bp CTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGCCACCACCTTCTTGGTaGTCTCAATGTCGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: LNLPNQSVWALSFQEVFLPPPSW*SQCRSR
Trigger: CCTACTGCGACATTGAGAGCACCAAGAAGGTGGTGG...CAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp ACGAATGGGAACTGGATGAACAATAGCAGTATCCTCACTGCTCTGATTCAGCTCCTCATCCAGTGTCAATaGACCATCTTTATCAAAGTC +
Preference number: 4 (lower is better)
Translates to: TNGNWMNNSSILTALIQLLIQCQ*TIFIKV
Trigger: GACTTTGATAAAGATGGTGCATTGACACTGGATGAG...GAGCTGAATCAGAGCAGTGAGGATACTGCTATTGTTCATCCAGTTCCCATTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000445570.5
CDS-3UTR GCA 90 bp TCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATGGTCTTGGAGGCACTaGAGGAGGATGGGCAACAAC +
Preference number: 4 (lower is better)
Translates to: SSKSISLGIKLSGSFSGKWSWRH*RRMGNN
Trigger: GTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGACCA...TTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp CTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATTGGTCTTGGAGGCACTaGAGGAGGATGGGCAACAAC +
Preference number: 4 (lower is better)
Translates to: LPNQSVWALSFQEVFLVNWSWRH*RRMGNN
Trigger: GTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGACCA...ATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAAGAGCAAGTGGTGTTGTaGCTTTGCTCACATTGGCAG +
Preference number: 4 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKEQVVL*LCSHWQ
Trigger: CTGCCAATGTGAGCAAAGGCACAACACCACTTGCTC...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp CATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTGAATATGAGGCTGCATaGCGAGATTCCTGTTCATTC +
Preference number: 4 (lower is better)
Translates to: HVDFAWSHTNGNWMNNSSEYEAA*RDSCSF
Trigger: GAATGAACAGGAATCTCGCCATGCAGCCTCATATTC...ACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp TTATTTTCTTCTAAAAGGTCAGATGGTTTCACAAGTAATGGGCTAGTGGGATTTCCCCCTGCCAGGTGGTaGGGGAATTACACCAGAATA +
Preference number: 4 (lower is better)
Translates to: LFSSKRSDGFTSNGLVGFPPARW*GNYTRI
Trigger: TATTCTGGTGTAATTCCCCCACCACCTGGCAGGGGG...AAATCCCACTAGCCCATTACTTGTGAAACCATCTGACCTTTTAGAAGAAAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAAGTTCGTACTGTTGTCTaGTCCTGGACAGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKVRTVV*SWTEAG
Trigger: TCCTGCTTCTGTCCAGGACCAGACAACAGTACGAAC...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR CCA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAAATAACCTACCTCACCTaGCTGATCCCCAACATCTGC +
Preference number: 4 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKITYLT*LIPNIC
Trigger: GCAGATGTTGGGGATCAGCCAGGTGAGGTAGGTTAT...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCATGTTAGAATCAAATTaGGTCAGAGTTTGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPMLESN*VRVCEL
Trigger: AAGCTCACAAACTCTGACCCAATTTGATTCTAACAT...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp AATTGGGTCAGAGTTTGTGAGCTTGAAGAGCGTTCACTAAATGTCTCCCACTGCCATACGAATGGGAACTaGATGAACAATAGCAGTATC +
Preference number: 4 (lower is better)
Translates to: NWVRVCELEERSLNVSHCHTNGN*MNNSSI
Trigger: GATACTGCTATTGTTCATCCAGTTCCCATTCGTATG...GCAGTGGGAGACATTTAGTGAACGCTCTTCAAGCTCACAAACTCTGACCCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431346.6
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAATCATGTGGATTTTGCTTaGAGTCATACGAATGGGAAC +
Preference number: 4 (lower is better)
Translates to: HTNGNWMNNSSIRISWCNHVDFA*SHTNGN
Trigger: GTTCCCATTCGTATGACTCCAAGCAAAATCCACATG...ATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431346.6
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp AATTGGCTTATAGGTGAGAGAATGGTCGAAGTTGTTCCAGTTGAACTTCCAGGGCATGTGGATTTTGCTTaGAGTCATACGAATGGGAAC +
Preference number: 4 (lower is better)
Translates to: NWLIGERMVEVVPVELPGHVDFA*SHTNGN
Trigger: GTTCCCATTCGTATGACTCCAAGCAAAATCCACATG...CCCTGGAAGTTCAACTGGAACAACTTCGACCATTCTCTCACCTATAAGCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp ATGAACAATAGCAGTATCCTCACTGCTCTGATTCAGCTCAGGCCATGTCTGGTTTCCATTTCCTGCATGTaGATTTTGCTTGGAGTCATA +
Preference number: 4 (lower is better)
Translates to: MNNSSILTALIQLRPCLVSISCM*ILLGVI
Trigger: TATGACTCCAAGCAAAATCCACATGCAGGAAATGGA...AACCAGACATGGCCTGAGCTGAATCAGAGCAGTGAGGATACTGCTATTGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445570.5
CDS-3UTR CCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAAGCTCCCGATCTGTTCTaGGTCAGAAGTAAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKAPDLF*VRSKRV
Trigger: GACTCTTTTACTTCTGACCCAGAACAGATCGGGAGC...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp CAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATAGCCATAGCCGGCAGGACTTCTaGATGTTTCTCGGCTTCATC +
Preference number: 4 (lower is better)
Translates to: QSVWALSFQEVFLVNHSHSRQDF*MFLGFI
Trigger: GATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCT...ATGGCTATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCTTTTACTATCTGTTTTaGCAACTCGAAGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLFYYLF*QLEENL
Trigger: CAAGTTCTCTTCGAGTTGCCAAAACAGATAGTAAAA...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp GTTCCAGTTGAACTTCCAGGGAAATTCTCTCCTCAAGAACATCCTTTAATTGTTAACAGGTTTAGGTGGTaGAGCAAGTGGTGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: VPVELPGKFSPQEHPLIVNRFRW*SKWCCA
Trigger: GGCACAACACCACTTGCTCCACCACCTAAACCTGTT...AACAATTAAAGGATGTTCTTGAGGAGAGAATTTCCCTGGAAGTTCAACTGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp AAAACAAGTATGTTCACAGTTAACGGCAATTGGCTTATAGGTGAGAGAATGGTCAACAGGTTTAGGTGGTaGAGCAAGTGGTGTTGTGCC +
Preference number: 4 (lower is better)
Translates to: KTSMFTVNGNWLIGERMVNRFRW*SKWCCA
Trigger: GGCACAACACCACTTGCTCCACCACCTAAACCTGTT...GACCATTCTCTCACCTATAAGCCAATTGCCGTTAACTGTGAACATACTTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAAAATGGCAGTTGTAGCTaGTGCTACAGTTCGTACTGT +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKNGSCS*CYSSYC
Trigger: ACAGTACGAACTGTAGCATCAGCTACAACTGCCATT...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR TCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAACTAGCAACCACCAGATaGAAAGCAGCACAAAACTCA +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKLATTR*KAAQNS
Trigger: TGAGTTTTGTGCTGCTTTTCATCTGGTGGTTGCTAG...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATGGTATCTGCTGAGGTaGGGTACTAGTGTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKWYLLR*GTSVSY
Trigger: ATAACTCACACTAGTACCTCACCTCAGCAGATACCA...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp CTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATGTATCCTCACTGCTCTaGTTCAGCTCAGGCCATGTC +
Preference number: 4 (lower is better)
Translates to: LPNQSVWALSFQEVFLVNVSSLL*FSSGHV
Trigger: GACATGGCCTGAGCTGAATCAGAGCAGTGAGGATAC...ATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445570.5
CDS-3UTR TCA 90 bp AGTTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGAAGAAGTAAAAGAGTCTaGACTACTGTAACCATCTGC +
Preference number: 4 (lower is better)
Translates to: SSISCMWILLGVIRMGTGRSKRV*TTVTIC
Trigger: GCAGATGGTTACAGTAGTTCAGACTCTTTTACTTCT...TCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGAGTCTGAGAGTTCCCTaGTTGTGCTTCACCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LNLPNQSVWALSFQEVFLSLRVP*LCFTKG
Trigger: CCCTTTGGTGAAGCACAATCAGGGAACTCTCAGACT...CAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp TACTGTAACCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTAAGTCTGAGAGTTCCCTaGTTGTGCTTCACCAAAGGG +
Preference number: 4 (lower is better)
Translates to: YCNHLLQYYQKRISPMNLSLRVP*LCFTKG
Trigger: CCCTTTGGTGAAGCACAATCAGGGAACTCTCAGACT...TAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGGTTACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CGCTGTGCAAACTTGGGCAAGTTGTATAACTTCTCTGTGCTTCAGTTTCTCCATCTCATTTGGGTGGCATaGAGTTTAACTTTGTTTCAC +
Preference number: 4 (lower is better)
Translates to: RCANLGKLYNFSVLQFLHLIWVA*SLTLFH
Trigger: GTGAAACAAAGTTAAACTTCATGCCACCCAAATGAG...ATGGAGAAACTGAAGCACAGAGAAGTTATACAACTTGCCCAAGTTTGCACAGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR GCA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATCCACCACCTTCTTGGTaGTCTCAATGTCGCAGTAGG +
Preference number: 4 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNPPPSW*SQCRSR
Trigger: CCTACTGCGACATTGAGAGCACCAAGAAGGTGGTGG...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp AGACCTTTGACGAGTTACATTGCTCCCGATCTGTTCTGGGTCAGAAGTAAAAGAATAACCAAGTCTTGTTaGACCACAAAGCTCCATGAT +
Preference number: 4 (lower is better)
Translates to: RPLTSYIAPDLFWVRSKRITKSC*TTKLHD
Trigger: ATCATGGAGCTTTGTGGTGCAACAAGACTTGGTTAT...TCTTTTACTTCTGACCCAGAACAGATCGGGAGCAATGTAACTCGTCAAAGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp CTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGAGGTTCCTGTGCATCTaGAGATGTACGAGGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LNLPNQSVWALSFQEVFLRFLCI*RCTRLN
Trigger: GTTCAGCCTCGTACATCTGCAGATGCACAGGAACCT...CAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp CATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAATCTCATCCAGTGTCAATaGACCATCTTTATCAAAGTC +
Preference number: 4 (lower is better)
Translates to: HTNGNWMNNSSIRISWCNLIQCQ*TIFIKV
Trigger: GACTTTGATAAAGATGGTGCATTGACACTGGATGAG...ATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431346.6
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp CAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTGGCCAAACTGACTGAAATCTaGAAAATTTGGTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QEQQLRHPSFVYVHQLLAKLTEI*KIWLLW
Trigger: CCAGAGCAACCAAATTTTGCAGATTTCAGTCAGTTT...GGCCAGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp CAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATAGCCATGAGCAAGTGGTGTTGTaGCTTTGCTCACATTGGCAG +
Preference number: 4 (lower is better)
Translates to: QSVWALSFQEVFLVNHSHEQVVL*LCSHWQ
Trigger: CTGCCAATGTGAGCAAAGGCACAACACCACTTGCTC...ATGGCTATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp TTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAACAGAAGCAGGATGCATaGTTAAAAGAGTACTGGTTG +
Preference number: 4 (lower is better)
Translates to: FPACGFCLESYEWELDEQQKQDA*LKEYWL
Trigger: CAACCAGTACTCTTTTAACCATGCATCCTGCTTCTG...TTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431346.6
CDS-3UTR CCA 90 bp TCAGGGCTGCTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAACAGAAGCAGGATGCATaGTTAAAAGAGTACTGGTTG +
Preference number: 4 (lower is better)
Translates to: SGLLNLPNQSVWALSFQEQKQDA*LKEYWL
Trigger: CAACCAGTACTCTTTTAACCATGCATCCTGCTTCTG...TTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAGCAGCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR CCA 90 bp GCTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGTTCGTACTGTTGTCTaGTCCTGGACAGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: AESSKSISLGIKLSGSFSVRTVV*SWTEAG
Trigger: TCCTGCTTCTGTCCAGGACCAGACAACAGTACGAAC...AGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR CCA 90 bp AGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAGTATCAGGATCAGCTaGTGCAATGTTAGAATCAAA +
Preference number: 4 (lower is better)
Translates to: SHTNGNWMNNSSIRISWCSIRIS*CNVRIK
Trigger: TTTGATTCTAACATTGCACCAGCTGATCCTGATACT...GCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431346.6
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACTCCATTTCCTGCATGTaGATTTTGCTTGGAGTCATA +
Preference number: 4 (lower is better)
Translates to: HFLHVDFAWSHTNGNWMNSISCM*ILLGVI
Trigger: TATGACTCCAAGCAAAATCCACATGCAGGAAATGGA...GTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000431346.6
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp AGACCTTTGACGAGTTACATTGCTCCCGATCTGTTCTGGGTCAGAAGTAAAAGATCCATTTCCTGCATGTaGATTTTGCTTGGAGTCATA +
Preference number: 4 (lower is better)
Translates to: RPLTSYIAPDLFWVRSKRSISCM*ILLGVI
Trigger: TATGACTCCAAGCAAAATCCACATGCAGGAAATGGA...TCTTTTACTTCTGACCCAGAACAGATCGGGAGCAATGTAACTCGTCAAAGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp GATCAGAAGCTTTTTCAGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATTTTTACTATCTGTTTTaGCAACTCGAAGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: DQKLFQPAGLLDVSRLHHFYYLF*QLEENL
Trigger: CAAGTTCTCTTCGAGTTGCCAAAACAGATAGTAAAA...ATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCTGAAAAAGCTTCTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp TTATTTTCTTCTAAAAGGTCAGATGGTTTCACAAGTAATGGGCTAGTGGGATTTAGGTGGTGGAGCAAGTaGTGTTGTGCCTTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: LFSSKRSDGFTSNGLVGFRWWSK*CCAFAH
Trigger: GTGAGCAAAGGCACAACACCACTTGCTCCACCACCT...AAATCCCACTAGCCCATTACTTGTGAAACCATCTGACCTTTTAGAAGAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATAGGTGGTGGAGCAAGTaGTGTTGTGCCTTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNRWWSK*CCAFAH
Trigger: GTGAGCAAAGGCACAACACCACTTGCTCCACCACCT...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp CTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATAGGTGGTGGAGCAAGTaGTGTTGTGCCTTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: LPNQSVWALSFQEVFLVNRWWSK*CCAFAH
Trigger: GTGAGCAAAGGCACAACACCACTTGCTCCACCACCT...ATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp TTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGATTCGCTATTCAATCTaGCCAAAACGGTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: FHFLHVDFAWSHTNGNWMIRYSI*PKRCWF
Trigger: AAACCAACACCGTTTTGGCCAGATTGAATAGCGAAT...CATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCATTCGCTATTCAATCTaGCCAAAACGGTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LHVDFAWSHTNGNWMNNSIRYSI*PKRCWF
Trigger: AAACCAACACCGTTTTGGCCAGATTGAATAGCGAAT...GCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAATACAGTTAACGGCAATTaGCTTATAGGTGAGAGAATG +
Preference number: 4 (lower is better)
Translates to: HTNGNWMNNSSIRISWCNTVNGN*LIGERM
Trigger: CATTCTCTCACCTATAAGCCAATTGCCGTTAACTGT...ATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATACCAGCAGAAGAACCTaGTTGTGCTTCACCAAAGGG +
Preference number: 4 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNTSRRT*LCFTKG
Trigger: CCCTTTGGTGAAGCACAATCAGGTTCTTCTGCTGGT...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR TCA 90 bp CTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATATCAGGCGACGTTCCTaGATGAGACCTTTGACGAGT +
Preference number: 4 (lower is better)
Translates to: LPNQSVWALSFQEVFLVNIRRRS*MRPLTS
Trigger: ACTCGTCAAAGGTCTCATTCAGGAACGTCGCCTGAT...ATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATATCAGGCGACGTTCCTaGATGAGACCTTTGACGAGT +
Preference number: 4 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNIRRRS*MRPLTS
Trigger: ACTCGTCAAAGGTCTCATTCAGGAACGTCGCCTGAT...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATGATGATGATCTAGAATaGGAGGGCTGTGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNDDDLE*EGCGLG
Trigger: TCCAAGGCCACAGCCCTCTCATTCTAGATCATCATC...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp AGACCTTTGACGAGTTACATTGCTCCCGATCTGTTCTGGGTCAGAAGTAAAAGATCTCCAAATTGGCTTTaGACCCAAAACCACTTAAAA +
Preference number: 4 (lower is better)
Translates to: RPLTSYIAPDLFWVRSKRSPNWL*TQNHLK
Trigger: TTTTAAGTGGTTTTGGGTTCAAAGCCAATTTGGAGA...TCTTTTACTTCTGACCCAGAACAGATCGGGAGCAATGTAACTCGTCAAAGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCTTTATCAAAGTCTaGGAGTTCCCTGATTGTGCT +
Preference number: 4 (lower is better)
Translates to: HVDFAWSHTNGNWMNNSSIFIKV*EFPDCA
Trigger: AGCACAATCAGGGAACTCTCAGACTTTGATAAAGAT...ACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp ACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAATGTTGTATTTGTCACAAGTTaGCATGTAAAAGAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: TNGNWMNNSSIRISWCNVVFVTS*HVKEAS
Trigger: TGAAGCCTCTTTTACATGTCAACTTGTGACAAATAC...AACATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626459.2
CDS-3UTR TCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAATCTTGGAAGCTTaGGGTTGTCAGTTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKLILEA*GCQFPL
Trigger: CAAGGGAAACTGACAACCTCAAGCTTCCAAGATTAA...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR TCA 90 bp CTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCACTTGTAATGTAAGGTaGGGAGTTCACAATCAAAAG +
Preference number: 4 (lower is better)
Translates to: LHVDFAWSHTNGNWMNNSTCNVR*GVHNQK
Trigger: CTTTTGATTGTGAACTCCTCACCTTACATTACAAGT...GCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR GCA 90 bp GATGCAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTATAACCAAGTCTTGTTaGACCACAAAGCTCCATGAT +
Preference number: 4 (lower is better)
Translates to: DARTAAKTPVFCVCSSTSITKSC*TTKLHD
Trigger: ATCATGGAGCTTTGTGGTGCAACAAGACTTGGTTAT...AGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp TTATTTTCTTCTAAAAGGTCAGATGGTTTCACAAGTAATGGGCTAGTGGGATTTGAAGTTGGTGGGGATTaGTGTGGTGAAACTACTGGG +
Preference number: 4 (lower is better)
Translates to: LFSSKRSDGFTSNGLVGFEVGGD*CGETTG
Trigger: CCCAGTAGTTTCACCACAGCAATCCCCACCAACTTC...AAATCCCACTAGCCCATTACTTGTGAAACCATCTGACCTTTTAGAAGAAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATGAAGTTGGTGGGGATTaGTGTGGTGAAACTACTGGG +
Preference number: 4 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNEVGGD*CGETTG
Trigger: CCCAGTAGTTTCACCACAGCAATCCCCACCAACTTC...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp CATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTCTCATCCAGTGTCAATaGACCATCTTTATCAAAGTC +
Preference number: 4 (lower is better)
Translates to: HVDFAWSHTNGNWMNNSSLIQCQ*TIFIKV
Trigger: GACTTTGATAAAGATGGTGCATTGACACTGGATGAG...ACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414243.1
ENST00000431346.6
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp AGGGCTGCTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTCTCATCCAGTGTCAATaGACCATCTTTATCAAAGTC +
Preference number: 4 (lower is better)
Translates to: RAAESSKSISLGIKLSGSLIQCQ*TIFIKV
Trigger: GACTTTGATAAAGATGGTGCATTGACACTGGATGAG...ACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAGCAGCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR GCA 90 bp GTTCCAGTTGAACTTCCAGGGAAATTCTCTCCTCAAGAACATCCTTTAATTGTTCCTGCATGTGGATTTTaGTTGGAGTCATACGAATGG +
Preference number: 4 (lower is better)
Translates to: VPVELPGKFSPQEHPLIVPACGF*LESYEW
Trigger: CCATTCGTATGACTCCAAGCAAAATCCACATGCAGG...AACAATTAAAGGATGTTCTTGAGGAGAGAATTTCCCTGGAAGTTCAACTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp GGGATTTGTATGATCGCTGCCAGTTCTTTTAAGTTCCATTTCCTGCATGTGGATCTAGAAAAATCAGAATaGGGCCACAATGAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: GICMIAASSFKFHFLHVDLEKSE*GHNESK
Trigger: TTTGCTCTCATTGTGGCCGCATTCTGATTTTTCTAG...ATCCACATGCAGGAAATGGAACTTAAAAGAACTGGCAGCGATCATACAAATCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAACAGAAGCAGGATGCATaGTTAAAAGAGTACTGGTTG +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKQKQDA*LKEYWL
Trigger: CAACCAGTACTCTTTTAACCATGCATCCTGCTTCTG...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR CCA 90 bp CATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACCCAAATCAATCAGTTTaGGCATTAAGCTTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: HFLHVDFAWSHTNGNWMNPNQSV*ALSFQE
Trigger: TTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG...GTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000431346.6
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCCCAAATCAATCAGTTTaGGCATTAAGCTTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LHVDFAWSHTNGNWMNNSPNQSV*ALSFQE
Trigger: TTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG...GCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000414243.1
ENST00000431346.6
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATAGCCATAGCTCAGGCCATGTCTaGTTTAGTGATGGCATCGAT +
Preference number: 4 (lower is better)
Translates to: QSVWALSFQEVFLVNHSHSSGHV*FSDGID
Trigger: ATCGATGCCATCACTAAACCAGACATGGCCTGAGCT...ATGGCTATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp TCAAATTGGGTCAGAGTTTGTGAGCTTGAAGAGCGTTCACTAAATGTCTCCCACAGTATCAGGATCAGCTaGTGCAATGTTAGAATCAAA +
Preference number: 4 (lower is better)
Translates to: SNWVRVCELEERSLNVSHSIRIS*CNVRIK
Trigger: TTTGATTCTAACATTGCACCAGCTGATCCTGATACT...GTGGGAGACATTTAGTGAACGCTCTTCAAGCTCACAAACTCTGACCCAATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431346.6
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp ACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAATGTTAGTATCAGGATCAGCTaGTGCAATGTTAGAATCAAA +
Preference number: 4 (lower is better)
Translates to: TNGNWMNNSSIRISWCNVSIRIS*CNVRIK
Trigger: TTTGATTCTAACATTGCACCAGCTGATCCTGATACT...AACATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431346.6
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CTGGAATCCCAGTTACGCTGTGCAAACTTGGGCAAGTTGTATAACTTCTCTGTGTTTTACTATCTGTTTTaGCAACTCGAAGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: LESQLRCANLGKLYNFSVFYYLF*QLEENL
Trigger: CAAGTTCTCTTCGAGTTGCCAAAACAGATAGTAAAA...CACAGAGAAGTTATACAACTTGCCCAAGTTTGCACAGCGTAACTGGGATTCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CCA 90 bp CTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGTCGAACAGGTTTAGGTaGTGGAGCAAGTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: LNLPNQSVWALSFQEVFLSNRFR*WSKWCC
Trigger: ACAACACCACTTGCTCCACCACCTAAACCTGTTCGA...CAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp GAGAAGAGAACCATATATGTGATCTTGGAGGTATCTGAGGTCACATTCCTTCTCATTCGCTATTCAATCTaGCCAAAACGGTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: EKRTIYVILEVSEVTFLLIRYSI*PKRCWF
Trigger: AAACCAACACCGTTTTGGCCAGATTGAATAGCGAAT...GAGAAGGAATGTGACCTCAGATACCTCCAAGATCACATATATGGTTCTCTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526022.1
CDS-3UTR CCA 90 bp CAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTGGCCAATGGGGATAAGTGGTaGAAATCAAATGACAGAATA +
Preference number: 4 (lower is better)
Translates to: QEQQLRHPSFVYVHQLLANGDKW*KSNDRI
Trigger: TATTCTGTCATTTGATTTCCACCACTTATCCCCATT...GGCCAGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR TCA 90 bp CAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATAGCCATGAGTATCTGCAAAACTaGCCCAGTTTTCTTGAGGTG +
Preference number: 4 (lower is better)
Translates to: QSVWALSFQEVFLVNHSHEYLQN*PSFLEV
Trigger: CACCTCAAGAAAACTGGGTCAGTTTTGCAGATACTC...ATGGCTATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR TCA 90 bp AAAACAAGTATGTTCACAGTTAACGGCAATTGGCTTATAGGTGAGAGAATGGTCATCCCCAACATCTGCTaGATCTTCCAAATCAATCAG +
Preference number: 4 (lower is better)
Translates to: KTSMFTVNGNWLIGERMVIPNIC*IFQINQ
Trigger: CTGATTGATTTGGAAGATTCAGCAGATGTTGGGGAT...GACCATTCTCTCACCTATAAGCCAATTGCCGTTAACTGTGAACATACTTGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAACTAGTGGGATTTGTATaGTCGCTGCCAGTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKLVGFV*SLPVLL
Trigger: TAAAAGAACTGGCAGCGATCATACAAATCCCACTAG...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp CTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGTGGTATCTGCTGAGGTaGGGTACTAGTGTGAGTTAT +
Preference number: 4 (lower is better)
Translates to: LNLPNQSVWALSFQEVFLWYLLR*GTSVSY
Trigger: ATAACTCACACTAGTACCTCACCTCAGCAGATACCA...CAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp GATGCAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTTCTCCAAATTGGCTTTaGACCCAAAACCACTTAAAA +
Preference number: 4 (lower is better)
Translates to: DARTAAKTPVFCVCSSTSSPNWL*TQNHLK
Trigger: TTTTAAGTGGTTTTGGGTTCAAAGCCAATTTGGAGA...AGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATGAGCATCAGGGCTGCTaGATCTTCCAAATCAATCAG +
Preference number: 4 (lower is better)
Translates to: LPNQSVWALSFQEVFLVNEHQGC*IFQINQ
Trigger: CTGATTGATTTGGAAGATTCAGCAGCCCTGATGCTC...ATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR TCA 90 bp GCTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTTGCCAGTGCGACCCCTaGAAGATGATTCTATTATGT +
Preference number: 4 (lower is better)
Translates to: AESSKSISLGIKLSGSFSCQCDP*KMILLC
Trigger: ACATAATAGAATCATCTTTCAGGGGTCGCACTGGCA...AGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR TCA 90 bp TCTAGAAAATTAGAGAAGAGAACCATATATGTGATCTTGGAGGTATCTGAGGTCGATCTTGGAGGTATCTaGGGTCACATTCCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SRKLEKRTIYVILEVSEVDLGGI*GHIPSL
Trigger: AAGAGAAGGAATGTGACCTCAGATACCTCCAAGATC...GACCTCAGATACCTCCAAGATCACATATATGGTTCTCTTCTCTAATTTTCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526022.1
CDS-3UTR GCA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAATGGACAGAAGCAGGATaGATGGTTAAAAGAGTACTG +
Preference number: 4 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKWTEAG*MVKRVL
Trigger: CAGTACTCTTTTAACCATGCATCCTGCTTCTGTCCA...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR GCA 90 bp TACTGTAACCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTATTTGACGAGTTACATTaGTCCCGATCTGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: YCNHLLQYYQKRISPMNLFDELH*SRSVLG
Trigger: ACCCAGAACAGATCGGGAGCAATGTAACTCGTCAAA...TAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGGTTACAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR GCA 90 bp GGGATTTGTATGATCGCTGCCAGTTCTTTTAAGTTCCATTTCCTGCATGTGGATAAACTGACTGAAATCTaGAAAATTTGGTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GICMIAASSFKFHFLHVDKLTEI*KIWLLW
Trigger: CCAGAGCAACCAAATTTTGCAGATTTCAGTCAGTTT...ATCCACATGCAGGAAATGGAACTTAAAAGAACTGGCAGCGATCATACAAATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp AGACCTTTGACGAGTTACATTGCTCCCGATCTGTTCTGGGTCAGAAGTAAAAGATCCTTTAATTGTTGCTaGAATTCGCTATTCAATCTG +
Preference number: 4 (lower is better)
Translates to: RPLTSYIAPDLFWVRSKRSFNCC*NSLFNL
Trigger: CAGATTGAATAGCGAATTGCAGCAACAATTAAAGGA...TCTTTTACTTCTGACCCAGAACAGATCGGGAGCAATGTAACTCGTCAAAGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATAGCCATGAATATGAGGCTGCATaGCGAGATTCCTGTTCATTC +
Preference number: 4 (lower is better)
Translates to: QSVWALSFQEVFLVNHSHEYEAA*RDSCSF
Trigger: GAATGAACAGGAATCTCGCCATGCAGCCTCATATTC...ATGGCTATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAAAAGAGTACTGGTTGGTaGAGTATCTGCAAAACTGAC +
Preference number: 4 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKKSTGW*SICKTD
Trigger: GTCAGTTTTGCAGATACTCCACCAACCAGTACTCTT...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR CCA 90 bp GATGCAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTCCAAATCAATCAGTTTaGGCATTAAGCTTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: DARTAAKTPVFCVCSSTSPNQSV*ALSFQE
Trigger: TTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG...AGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAATATGTTAGAATCAAATTaGGTCAGAGTTTGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: HTNGNWMNNSSIRISWCNMLESN*VRVCEL
Trigger: AAGCTCACAAACTCTGACCCAATTTGATTCTAACAT...ATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431346.6
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAACATACGAATGGGAACTaGATGAACAATAGCAGTATC +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKHTNGN*MNNSSI
Trigger: GATACTGCTATTGTTCATCCAGTTCCCATTCGTATG...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp CAATTCGCTATTCAATCTGGCCAAAACGGTGTTGGTTTCCTTATTACGTCTAATCATGTGGATTTTGCTTaGAGTCATACGAATGGGAAC +
Preference number: 4 (lower is better)
Translates to: QFAIQSGQNGVGFLITSNHVDFA*SHTNGN
Trigger: GTTCCCATTCGTATGACTCCAAGCAAAATCCACATG...ATTAGACGTAATAAGGAAACCAACACCGTTTTGGCCAGATTGAATAGCGAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATGCTCCCGATCTGTTCTaGGTCAGAAGTAAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNAPDLF*VRSKRV
Trigger: GACTCTTTTACTTCTGACCCAGAACAGATCGGGAGC...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp CCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATGCTCCCGATCTGTTCTaGGTCAGAAGTAAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: PNQSVWALSFQEVFLVNHAPDLF*VRSKRV
Trigger: GACTCTTTTACTTCTGACCCAGAACAGATCGGGAGC...ATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATTCGAACAGGTTTAGGTaGTGGAGCAAGTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNSNRFR*WSKWCC
Trigger: ACAACACCACTTGCTCCACCACCTAAACCTGTTCGA...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp CCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATTCGAACAGGTTTAGGTaGTGGAGCAAGTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: PNQSVWALSFQEVFLVNHSNRFR*WSKWCC
Trigger: ACAACACCACTTGCTCCACCACCTAAACCTGTTCGA...ATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp GGGATTTGTATGATCGCTGCCAGTTCTTTTAAGTTCCATTTCCTGCATGTGGATATTATGCATGCATGCTaGAAGAGACAGACTGAAATT +
Preference number: 4 (lower is better)
Translates to: GICMIAASSFKFHFLHVDIMHAC*KRQTEI
Trigger: AATTTCAGTCTGTCTCTTCCAGCATGCATGCATAAT...ATCCACATGCAGGAAATGGAACTTAAAAGAACTGGCAGCGATCATACAAATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CCA 90 bp CATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAATTTTAATGGGGATAAGTaGTGGAAATCAAATGACAGA +
Preference number: 4 (lower is better)
Translates to: HTNGNWMNNSSIRISWCNFNGDK*WKSNDR
Trigger: TCTGTCATTTGATTTCCACCACTTATCCCCATTAAA...ATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CCA 90 bp TCAAATTGGGTCAGAGTTTGTGAGCTTGAAGAGCGTTCACTAAATGTCTCCCACGGAGTAAAAGATCACTaGAGAAGATTTAGCAAAGTA +
Preference number: 4 (lower is better)
Translates to: SNWVRVCELEERSLNVSHGVKDH*RRFSKV
Trigger: TACTTTGCTAAATCTTCTCCAGTGATCTTTTACTCC...GTGGGAGACATTTAGTGAACGCTCTTCAAGCTCACAAACTCTGACCCAATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR CAA 72 bp AGCATCAGGGCTGCTGAATCTTCCAAATCAATCAGTTaGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: SIRAAESSKSIS*GIKLSGSFSGK
Trigger: TTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAGCAGCCCTGATGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR TCA 90 bp CCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATCTAGCAACCACCAGATaGAAAGCAGCACAAAACTCA +
Preference number: 4 (lower is better)
Translates to: PNQSVWALSFQEVFLVNHLATTR*KAAQNS
Trigger: TGAGTTTTGTGCTGCTTTTCATCTGGTGGTTGCTAG...ATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000530575.1
ENST00000626459.2
CDS-3UTR TCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAACGTCTAATTGATGCCTaGATAGCTTTCTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKRLIDA*IAFLSF
Trigger: GAAAGATAAGAAAGCTATTCAGGCATCAATTAGACG...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAACAGAAAACGCCATCCTaGCCTTTTTATTGTCGAAAT +
Preference number: 4 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKQKTPS*PFYCRN
Trigger: ATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTG...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp TCTAGAAAATTAGAGAAGAGAACCATATATGTGATCTTGGAGGTATCTGAGGTCAGAGAACCATATATGTaGTCTTGGAGGTATCTGAGG +
Preference number: 4 (lower is better)
Translates to: SRKLEKRTIYVILEVSEVREPYM*SWRYLR
Trigger: CCTCAGATACCTCCAAGATCACATATATGGTTCTCT...GACCTCAGATACCTCCAAGATCACATATATGGTTCTCTTCTCTAATTTTCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526022.1
CDS-3UTR GCA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAAATAACCAAGTCTTGTTaGACCACAAAGCTCCATGAT +
Preference number: 4 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKITKSC*TTKLHD
Trigger: ATCATGGAGCTTTGTGGTGCAACAAGACTTGGTTAT...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp GCTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTTGGACAGAAGCAGGATaGATGGTTAAAAGAGTACTG +
Preference number: 4 (lower is better)
Translates to: AESSKSISLGIKLSGSFSWTEAG*MVKRVL
Trigger: CAGTACTCTTTTAACCATGCATCCTGCTTCTGTCCA...AGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR GCA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAACTCATCCAGTGTCAATaGACCATCTTTATCAAAGTC +
Preference number: 4 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKLIQCQ*TIFIKV
Trigger: GACTTTGATAAAGATGGTGCATTGACACTGGATGAG...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp CTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCCTGCATGTGGATTTTaGTTGGAGTCATACGAATGG +
Preference number: 4 (lower is better)
Translates to: LPNQSVWALSFQEVFLVNPACGF*LESYEW
Trigger: CCATTCGTATGACTCCAAGCAAAATCCACATGCAGG...ATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp CCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTATCTTATTTCAGAAAAGGTGGGTGTaGCAACAAACACAATCTACC +
Preference number: 4 (lower is better)
Translates to: PSATVLPEANFTDEFILFQKRWV*QQTQST
Trigger: GGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTG...AAATAAGATAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626459.2
CDS-3UTR GCA 90 bp GGGATTTGTATGATCGCTGCCAGTTCTTTTAAGTTCCATTTCCTGCATGTGGATCACAAGATGAATAGATaGAGCAAAAATAGTAGTGTC +
Preference number: 4 (lower is better)
Translates to: GICMIAASSFKFHFLHVDHKMNR*SKNSSV
Trigger: GACACTACTATTTTTGCTGCATCTATTCATCTTGTG...ATCCACATGCAGGAAATGGAACTTAAAAGAACTGGCAGCGATCATACAAATCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CCA 90 bp CAATTCGCTATTCAATCTGGCCAAAACGGTGTTGGTTTCCTTATTACGTCTAATGAAATCTGCAAAATTTaGTTGCTCTGGTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: QFAIQSGQNGVGFLITSNEICKI*LLWYLL
Trigger: CAGCAGATACCAGAGCAACCAAATTTTGCAGATTTC...ATTAGACGTAATAAGGAAACCAACACCGTTTTGGCCAGATTGAATAGCGAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAAGAAATCTGCAAAATTTaGTTGCTCTGGTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKEICKI*LLWYLL
Trigger: CAGCAGATACCAGAGCAACCAAATTTTGCAGATTTC...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp AAAACAAGTATGTTCACAGTTAACGGCAATTGGCTTATAGGTGAGAGAATGGTCACAGTTAACGGCAATTaGCTTATAGGTGAGAGAATG +
Preference number: 4 (lower is better)
Translates to: KTSMFTVNGNWLIGERMVTVNGN*LIGERM
Trigger: CATTCTCTCACCTATAAGCCAATTGCCGTTAACTGT...GACCATTCTCTCACCTATAAGCCAATTGCCGTTAACTGTGAACATACTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAAACAGTTAACGGCAATTaGCTTATAGGTGAGAGAATG +
Preference number: 4 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKTVNGN*LIGERM
Trigger: CATTCTCTCACCTATAAGCCAATTGCCGTTAACTGT...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
3UTR CAA 72 bp TCCCCAACATCTGCTGAATCTTCCAAATCAATCAGTTaGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: SPTSAESSKSIS*GIKLSGSFSGK
Trigger: TTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAGCAGATGTTGGGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR CAA 72 bp CAATTATGCATGCATGCTGGAAGAGACAGACTGAAATaGCCCTCTTTGGAACATCTTACCTTAAAAGAGTTA +
Preference number: 4 (lower is better)
Translates to: QLCMHAGRDRLK*PSLEHLTLKEL
Trigger: TAACTCTTTTAAGGTAAGATGTTCCAAAGAGGGCAATTTCAGTCTGTCTCTTCCAGCATGCATGCATAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR TCA 90 bp TACTGTAACCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTACCAGAATACGACCCTTaGTTTTCAGAATCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: YCNHLLQYYQKRISPMNLPEYDP*FSESEE
Trigger: TTCTTCAGATTCTGAAAATCAAGGGTCGTATTCTGG...TAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGGTTACAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR TCA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATCTAGTGGGATTTGTATaGTCGCTGCCAGTTCTTTTA +
Preference number: 4 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNLVGFV*SLPVLL
Trigger: TAAAAGAACTGGCAGCGATCATACAAATCCCACTAG...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp CAATTCGCTATTCAATCTGGCCAAAACGGTGTTGGTTTCCTTATTACGTCTAATCGTCTAATTGATGCCTaGATAGCTTTCTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: QFAIQSGQNGVGFLITSNRLIDA*IAFLSF
Trigger: GAAAGATAAGAAAGCTATTCAGGCATCAATTAGACG...ATTAGACGTAATAAGGAAACCAACACCGTTTTGGCCAGATTGAATAGCGAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp AAAACAAGTATGTTCACAGTTAACGGCAATTGGCTTATAGGTGAGAGAATGGTCTCTCCAAATTGGCTTTaGACCCAAAACCACTTAAAA +
Preference number: 4 (lower is better)
Translates to: KTSMFTVNGNWLIGERMVSPNWL*TQNHLK
Trigger: TTTTAAGTGGTTTTGGGTTCAAAGCCAATTTGGAGA...GACCATTCTCTCACCTATAAGCCAATTGCCGTTAACTGTGAACATACTTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAAAAACTGACTGAAATCTaGAAAATTTGGTTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKKLTEI*KIWLLW
Trigger: CCAGAGCAACCAAATTTTGCAGATTTCAGTCAGTTT...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR GCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATCCTTTAATTGTTGCTaGAATTCGCTATTCAATCTG +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKSFNCC*NSLFNL
Trigger: CAGATTGAATAGCGAATTGCAGCAACAATTAAAGGA...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp CCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATAAGAGTACTGGTTGGTaGAGTATCTGCAAAACTGAC +
Preference number: 4 (lower is better)
Translates to: PNQSVWALSFQEVFLVNHKSTGW*SICKTD
Trigger: GTCAGTTTTGCAGATACTCCACCAACCAGTACTCTT...ATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR CCA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAAGATCATCATAACTACTaGATTGCCTACGAATTTCAA +
Preference number: 4 (lower is better)
Translates to: TNTIYPPENAILTFLLSKDHHNY*IAYEFQ
Trigger: TTGAAATTCGTAGGCAATCCAGTAGTTATGATGATC...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR CCA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAACCAAATCAATCAGTTTaGGCATTAAGCTTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKPNQSV*ALSFQE
Trigger: TTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CCA 90 bp TACTGTAACCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTACATACGAATGGGAACTaGATGAACAATAGCAGTATC +
Preference number: 4 (lower is better)
Translates to: YCNHLLQYYQKRISPMNLHTNGN*MNNSSI
Trigger: GATACTGCTATTGTTCATCCAGTTCCCATTCGTATG...TAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGGTTACAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR CCA 90 bp CAATTCGCTATTCAATCTGGCCAAAACGGTGTTGGTTTCCTTATTACGTCTAATCAGACACAAGTATCCTaGCTGCAATTATGTCATAAA +
Preference number: 4 (lower is better)
Translates to: QFAIQSGQNGVGFLITSNQTQVS*LQLCHK
Trigger: TTTATGACATAATTGCAGCCAGGATACTTGTGTCTG...ATTAGACGTAATAAGGAAACCAACACCGTTTTGGCCAGATTGAATAGCGAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR CAA 72 bp TCTAGAAAATTAGAGAAGAGAACCATATATGTGATCTaGGAGGTATCTGAGGTCACATTCCTTCTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: SRKLEKRTIYVI*EVSEVTFLLFR
Trigger: CCTAAAGAGAAGGAATGTGACCTCAGATACCTCCAAGATCACATATATGGTTCTCTTCTCTAATTTTCTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526022.1
CDS-3UTR TCA 90 bp AAATTAGAGAAGAGAACCATATATGTGATCTTGGAGGTATCTGAGGTCACATTCCGTCTAATTGATGCCTaGATAGCTTTCTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: KLEKRTIYVILEVSEVTFRLIDA*IAFLSF
Trigger: GAAAGATAAGAAAGCTATTCAGGCATCAATTAGACG...GAATGTGACCTCAGATACCTCCAAGATCACATATATGGTTCTCTTCTCTAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526022.1
CDS-3UTR TCA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATAGAAGTAAAAGAGTCTaGACTACTGTAACCATCTGC +
Preference number: 4 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNRSKRV*TTVTIC
Trigger: GCAGATGGTTACAGTAGTTCAGACTCTTTTACTTCT...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR TCA 90 bp CCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATCAGAAAACGCCATCCTaGCCTTTTTATTGTCGAAAT +
Preference number: 4 (lower is better)
Translates to: PNQSVWALSFQEVFLVNHQKTPS*PFYCRN
Trigger: ATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTG...ATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTATCTTATTTATCTTTATCAAAGTCTaGGAGTTCCCTGATTGTGCT +
Preference number: 4 (lower is better)
Translates to: PSATVLPEANFTDEFILFIFIKV*EFPDCA
Trigger: AGCACAATCAGGGAACTCTCAGACTTTGATAAAGAT...AAATAAGATAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR GCA 90 bp CCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTATCTTATTTCTCATCCAGTGTCAATaGACCATCTTTATCAAAGTC +
Preference number: 4 (lower is better)
Translates to: PSATVLPEANFTDEFILFLIQCQ*TIFIKV
Trigger: GACTTTGATAAAGATGGTGCATTGACACTGGATGAG...AAATAAGATAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR GCA 90 bp TCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAAATGTTCTCTCAATTATaGATGCATGCTGGAAGAGAC +
Preference number: 4 (lower is better)
Translates to: SSKSISLGIKLSGSFSGKMFSQL*MHAGRD
Trigger: GTCTCTTCCAGCATGCATGCATAATTGAGAGAACAT...TTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR GCA 90 bp CAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATAGCCATTGTATAACTTCTCTGTaGTTCAGTTTCTCCATCTGT +
Preference number: 4 (lower is better)
Translates to: QSVWALSFQEVFLVNHSHCITSL*FSFSIC
Trigger: ACAGATGGAGAAACTGAAGCACAGAGAAGTTATACA...ATGGCTATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR GCA 90 bp TTAGAGAAGAGAACCATATATGTGATCTTGGAGGTATCTGAGGTCACATTCCTTACCTTTAATTGTTGCTaGAATTCGCTATTCAATCTG +
Preference number: 4 (lower is better)
Translates to: LEKRTIYVILEVSEVTFLTFNCC*NSLFNL
Trigger: CAGATTGAATAGCGAATTGCAGCAACAATTAAAGGT...AAGGAATGTGACCTCAGATACCTCCAAGATCACATATATGGTTCTCTTCTCTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526022.1
CDS-3UTR CCA 90 bp GCTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTCCAAATCAATCAGTTTaGGCATTAAGCTTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: AESSKSISLGIKLSGSFSPNQSV*ALSFQE
Trigger: TTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG...AGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000530575.1
ENST00000626459.2
CDS-3UTR CCA 90 bp CTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGCCAAATCAATCAGTTTaGGCATTAAGCTTTCAGGAA +
Preference number: 4 (lower is better)
Translates to: LNLPNQSVWALSFQEVFLPNQSV*ALSFQE
Trigger: TTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG...CAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000530575.1
ENST00000626459.2
CDS-3UTR CCA 90 bp TTATTTTCTTCTAAAAGGTCAGATGGTTTCACAAGTAATGGGCTAGTGGGATTTGAAATCTGCAAAATTTaGTTGCTCTGGTATCTGCTG +
Preference number: 4 (lower is better)
Translates to: LFSSKRSDGFTSNGLVGFEICKI*LLWYLL
Trigger: CAGCAGATACCAGAGCAACCAAATTTTGCAGATTTC...AAATCCCACTAGCCCATTACTTGTGAAACCATCTGACCTTTTAGAAGAAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CCA 90 bp TCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAAACAGTTAACGGCAATTaGCTTATAGGTGAGAGAATG +
Preference number: 4 (lower is better)
Translates to: SSKSISLGIKLSGSFSGKTVNGN*LIGERM
Trigger: CATTCTCTCACCTATAAGCCAATTGCCGTTAACTGT...TTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR TCA 90 bp CCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATCGTCTAATTGATGCCTaGATAGCTTTCTTATCTTTC +
Preference number: 4 (lower is better)
Translates to: PNQSVWALSFQEVFLVNHRLIDA*IAFLSF
Trigger: GAAAGATAAGAAAGCTATTCAGGCATCAATTAGACG...ATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR GCA 90 bp GCTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTTCCTTTAATTGTTGCTaGAATTCGCTATTCAATCTG +
Preference number: 4 (lower is better)
Translates to: AESSKSISLGIKLSGSFSSFNCC*NSLFNL
Trigger: CAGATTGAATAGCGAATTGCAGCAACAATTAAAGGA...AGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
3UTR CAA 72 bp ATGCATGCTGGAAGAGACAGACTGAAATTGCCCTCTTaGGAACATCTTACCTTAAAAGAGTTAACTTTTAAT +
Preference number: 4 (lower is better)
Translates to: MHAGRDRLKLPS*EHLTLKELTFN
Trigger: ATTAAAAGTTAACTCTTTTAAGGTAAGATGTTCCAAAGAGGGCAATTTCAGTCTGTCTCTTCCAGCATGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483468.5
3UTR CAA 72 bp TTTGCCAAAAAGAAGGTATTTACTTGTGTACCTCATTaGGGTGGCATGAAGTTTAACTTTGTTTCACAAGAC +
Preference number: 4 (lower is better)
Translates to: FAKKKVFTCVPH*GGMKFNFVSQD
Trigger: GTCTTGTGAAACAAAGTTAAACTTCATGCCACCCAAATGAGGTACACAAGTAAATACCTTCTTTTTGGCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CCA 90 bp CCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATGATCATCATAACTACTaGATTGCCTACGAATTTCAA +
Preference number: 4 (lower is better)
Translates to: PNQSVWALSFQEVFLVNHDHHNY*IAYEFQ
Trigger: TTGAAATTCGTAGGCAATCCAGTAGTTATGATGATC...ATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR CCA 90 bp CCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATTTTTACTATCTGTTTTaGCAACTCGAAGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: PNQSVWALSFQEVFLVNHFYYLF*QLEENL
Trigger: CAAGTTCTCTTCGAGTTGCCAAAACAGATAGTAAAA...ATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS GCA 90 bp TCATGCCATAGCACTCCAGCCTGTAGGACCACGTCGTTCGGCAGCTaGGCGGCCCGGAACAGCTCCAGCACCCGCCCGTTGACCACCACC +
Preference number: 5 (lower is better)
Translates to: SCHSTPACRTTSFGS*AARNSSSTRPLTTT
Trigger: GGTGGTGGTCAACGGGCGGGTGCTGGAGCTGTTCCGGGCCGCGCAGCTGCCGAACGACGTGGTCCTACAGGCTGGAGTGCTATGGCATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531675.1
CDS GCA 90 bp GCACCACAAAGCTCCATGATCTGTAGGACCACGTCGTTCGGCAGCTaGGCGGCCCGGAACAGCTCCAGCACCCGCCCGTTGACCACCACC +
Preference number: 5 (lower is better)
Translates to: APQSSMICRTTSFGS*AARNSSSTRPLTTT
Trigger: GGTGGTGGTCAACGGGCGGGTGCTGGAGCTGTTCCGGGCCGCGCAGCTGCCGAACGACGTGGTCCTACAGATCATGGAGCTTTGTGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000445570.5
ENST00000450536.7
ENST00000483468.5
ENST00000529597.5
ENST00000626459.2
CDS TCA 90 bp CGTTCGGCAGCTGCGCGGCCCGGAACAGCTCCAGCACCCGCCCGTTaGCCACCACCTTCTTGGTGCTCTCAATGTCGCAGTAGGAGAAGA +
Preference number: 5 (lower is better)
Translates to: RSAAARPGTAPAPAR*PPPSWCSQCRSRRR
Trigger: TCTTCTCCTACTGCGACATTGAGAGCACCAAGAAGGTGGTGGTCAACGGGCGGGTGCTGGAGCTGTTCCGGGCCGCGCAGCTGCCGAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000445570.5
ENST00000450536.7
ENST00000483468.5
ENST00000529597.5
ENST00000531675.1
ENST00000626459.2
CDS TCA 90 bp GGCCCAGGTCCCGCGAGAGGCCTCTCACTATTCCCACCGCTGGGATaGCGGCTGTGCTTCCTCCATGTGTGTGGAGAAGTTGGTGGGGAT +
Preference number: 5 (lower is better)
Translates to: GPGPARGLSLFPPLG*RLCFLHVCGEVGGD
Trigger: ATCCCCACCAACTTCTCCACACACATGGAGGAAGCACAGCCGTCATCCCAGCGGTGGGAATAGTGAGAGGCCTCTCGCGGGACCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000445570.5
ENST00000450536.7
ENST00000483468.5
ENST00000529597.5
ENST00000626459.2
CDS-3UTR CAA 90 bp ATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGACCAGGAGCCTGTGAGGTGAGGGCTGTGGTCTaGGAGGCACTGCAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: MRPSASTGRCTAGPGACEVRAVV*EALQED
Trigger: ATCCTCCTGCAGTGCCTCCAAGACCACAGCCCTCAC...CTCACAGGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp ATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGACCAGGAGCCTGTGAGGTGCCTTTGCTCACATaGGCAGGAGCACTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: MRPSASTGRCTAGPGACEVPLLT*AGALAA
Trigger: AGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCAC...CTCACAGGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS CCA 90 bp AAAATGGCCCAGGTCCCGCGAGAGGCCTCTCACTATTCCCACCGCTaGGATGACGGCTGTGCTTCCTCCATGTGTGTGGAGAAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: KMAQVPREASHYSHR*DDGCASSMCVEKLV
Trigger: CACCAACTTCTCCACACACATGGAGGAAGCACAGCCGTCATCCCAGCGGTGGGAATAGTGAGAGGCCTCTCGCGGGACCTGGGCCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000445570.5
ENST00000450536.7
ENST00000483468.5
ENST00000529597.5
ENST00000626459.2
CDS-3UTR CAA 90 bp ATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGACCAGGAGCCTGTGAGGTGGAGCAAGTGGTGTaGTGCCTTTGCTCACATTGG +
Preference number: 5 (lower is better)
Translates to: MRPSASTGRCTAGPGACEVEQVV*CLCSHW
Trigger: CCAATGTGAGCAAAGGCACAACACCACTTGCTCCAC...CTCACAGGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp TCTCCCACTGCTCACTGCTCTGATTCAGCTCAGGCCATGTCTGGTTTAGTGATGTCCAGCACCCGCCCGTaGACCACCACCTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SPTAHCSDSAQAMSGLVMSSTRP*TTTFLV
Trigger: CACCAAGAAGGTGGTGGTCAACGGGCGGGTGCTGGA...CATCACTAAACCAGACATGGCCTGAGCTGAATCAGAGCAGTGAGCAGTGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626459.2
CDS-3UTR CAA 90 bp GATGCAGTGTTCCAACCTAGCCTCCTGCTGGAACACTGTGTCAACCCTGCCTCCGGCATCGATGGTGACTaGCTTGGAGGAGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: DAVFQPSLLLEHCVNPASGIDGD*LGGASA
Trigger: TGCTGAAGCTCCTCCAAGCAAGTCACCATCGATGCC...GGAGGCAGGGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTGGAACACTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS CCA 90 bp CCAGGAGCCTGTGAGGGCTGTGGTCTTGGAGGCACTGCAGGAGGATaGGCAACAACTCCAGCCTGTTGTTGTCCTACAGTATTACCAGAA +
Preference number: 5 (lower is better)
Translates to: PGACEGCGLGGTAGG*ATTPACCCPTVLPE
Trigger: TTCTGGTAATACTGTAGGACAACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGACCACAGCCCTCACAGGCTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409812.6
ENST00000530255.1
CDS-3UTR CAA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCTCCAGCACCCGCCCGTaGACCACCACCTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLSSTRP*TTTFLV
Trigger: CACCAAGAAGGTGGTGGTCAACGGGCGGGTGCTGGA...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp AGTTATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGACCAGGAGCCTGAACTCCAGCCTGTTGTaGTCCTGTGGTGACTGTAAA +
Preference number: 5 (lower is better)
Translates to: SYEAIGIHWAMHSRTRSLNSSLL*SCGDCK
Trigger: TTTACAGTCACCACAGGACAACAACAGGCTGGAGTT...CAGGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCATAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp ATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGACCAGGAGCCTGTGAGATCTGCAAAATTTGGTaGCTCTGGTATCTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: MRPSASTGRCTAGPGACEICKIW*LWYLLR
Trigger: CCTCAGCAGATACCAGAGCAACCAAATTTTGCAGAT...CTCACAGGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp GGTACTAGTGTGAGTTATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGAGTGGTGTTGTGCCTTaGCTCACATTGGCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: GTSVSYEAIGIHWAMHSRSGVVP*LTLAGA
Trigger: TGCTCCTGCCAATGTGAGCAAAGGCACAACACCACT...CCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCATAACTCACACTAGTACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp ATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGACCAGGAGCCTGTGAGCAGTGGATGTGGCAGTaGACTAGATATCAAAGGACT +
Preference number: 5 (lower is better)
Translates to: MRPSASTGRCTAGPGACEQWMWQ*TRYQRT
Trigger: AGTCCTTTGATATCTAGTCAACTGCCACATCCACTG...CTCACAGGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CAA 90 bp GGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCAGGCATCGATGGTGACTaGCTTGGAGGAGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: GLGGGASGVVPLLTLAGAGIDGD*LGGASA
Trigger: TGCTGAAGCTCCTCCAAGCAAGTCACCATCGATGCC...TGCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp AGTTATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGACCAGGAGCCTGTCCTGCATGTGGATTTaGCTTGGAGTCATACGAATG +
Preference number: 5 (lower is better)
Translates to: SYEAIGIHWAMHSRTRSLSCMWI*LGVIRM
Trigger: CATTCGTATGACTCCAAGCAAAATCCACATGCAGGA...CAGGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCATAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCGTGAGGGCTGTGGTCTaGGAGGCACTGCAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPVRAVV*EALQED
Trigger: ATCCTCCTGCAGTGCCTCCAAGACCACAGCCCTCAC...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp ATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGACCAGGAGCCTGTGAGGCAAACTTGGGCAAGTaGTATAACTTCTCTGTGCTT +
Preference number: 5 (lower is better)
Translates to: MRPSASTGRCTAGPGACEANLGK*YNFSVL
Trigger: AAGCACAGAGAAGTTATACAACTTGCCCAAGTTTGC...CTCACAGGCTCCTGGTCCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS TCA 90 bp GTGCTTCCTCCATGTGTGTGGAGAAGTTGGTGGGGATTGCTGTGGTaGAACTACTGGGGATGCAGGTTCCTGTGCATCTGCAGATGTACG +
Preference number: 5 (lower is better)
Translates to: VLPPCVWRSWWGLLW*NYWGCRFLCICRCT
Trigger: CGTACATCTGCAGATGCACAGGAACCTGCATCCCCAGTAGTTTCACCACAGCAATCCCCACCAACTTCTCCACACACATGGAGGAAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000445570.5
ENST00000450536.7
ENST00000483468.5
ENST00000529597.5
ENST00000626459.2
CDS-3UTR CAA 90 bp CTGGCTGATCCCCAACATCTGATGCAGTGTTCCAACCTAGCCTCCTGCTGGAACCTACAGTTCGTACTGTaGTCTGGTCCTGGACAGAAG +
Preference number: 5 (lower is better)
Translates to: LADPQHLMQCSNLASCWNLQFVL*SGPGQK
Trigger: CTTCTGTCCAGGACCAGACAACAGTACGAACTGTAG...GTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAGATGTTGGGGATCAGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431346.6
CDS-3UTR CAA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCGCGCTTCCCGGAAAGTaGTGGGGCTTCGAACCTAAA +
Preference number: 5 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLALPGK*WGFEPK
Trigger: TTTAGGTTCGAAGCCCCACAACTTTCCGGGAAGCGC...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp GATGCAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTTCCAGCACCCGCCCGTaGACCACCACCTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: DARTAAKTPVFCVCSSTSSSTRP*TTTFLV
Trigger: CACCAAGAAGGTGGTGGTCAACGGGCGGGTGCTGGA...AGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp GTCTTGGAGGCACTGCAGGAGGATGGGCAACAACTCCAGCCTGTTGTTGTCCTGTTGAAGCAACAAATCTaGGCAGAGGAAGGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: VLEALQEDGQQLQPVVVLLKQQI*AEEGPL
Trigger: TAAAGGACCTTCCTCTGCCAAGATTTGTTGCTTCAA...CAGGACAACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp CATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACGGATCCCTTTTTCACTaGCCCCCTGCCAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: HFLHVDFAWSHTNGNWMNGSLFH*PPARWW
Trigger: CCACCACCTGGCAGGGGGCAAGTGAAAAAGGGATCC...GTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCATGTGTGTGGAGAAGTaGGTGGGGATTGCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPMCVEK*VGIAVV
Trigger: CACCACAGCAATCCCCACCAACTTCTCCACACACAT...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp CAACCTAGCCTCCTGCTGGAACACTGTGTCAACCCTGCCTCCCTCCTGTGGGTTATCATAACTACTGGATaGCCTACGAATTTCAATGGC +
Preference number: 5 (lower is better)
Translates to: QPSLLLEHCVNPASLLWVIITTG*PTNFNG
Trigger: GCCATTGAAATTCGTAGGCAATCCAGTAGTTATGAT...AACCCACAGGAGGGAGGCAGGGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431346.6
CDS-3UTR CAA 90 bp CTGATGCAGTGTTCCAACCTAGCCTCCTGCTGGAACACTGTGTCAACCCTGCCTTCCTGCATGTGGATTTaGCTTGGAGTCATACGAATG +
Preference number: 5 (lower is better)
Translates to: LMQCSNLASCWNTVSTLPSCMWI*LGVIRM
Trigger: CATTCGTATGACTCCAAGCAAAATCCACATGCAGGA...AGGCAGGGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431346.6
CDS-3UTR CAA 90 bp AGACCTTTGACGAGTTACATTGCTCCCGATCTGTTCTGGGTCAGAAGTAAAAGAGTGAGGGCTGTGGTCTaGGAGGCACTGCAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: RPLTSYIAPDLFWVRSKRVRAVV*EALQED
Trigger: ATCCTCCTGCAGTGCCTCCAAGACCACAGCCCTCAC...TCTTTTACTTCTGACCCAGAACAGATCGGGAGCAATGTAACTCGTCAAAGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCGTGGAGCAAGTGGTGTaGTGCCTTTGCTCACATTGG +
Preference number: 5 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLVEQVV*CLCSHW
Trigger: CCAATGTGAGCAAAGGCACAACACCACTTGCTCCAC...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp TTCTGCTCTGCCCCTGACATCATCAGAGCATCAGGGCTGCTGAATCTTCCAAATCTACAGTTCGTACTGTaGTCTGGTCCTGGACAGAAG +
Preference number: 5 (lower is better)
Translates to: FCSAPDIIRASGLLNLPNLQFVL*SGPGQK
Trigger: CTTCTGTCCAGGACCAGACAACAGTACGAACTGTAG...ATTTGGAAGATTCAGCAGCCCTGATGCTCTGATGATGTCAGGGGCAGAGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR CAA 90 bp CAAGAACAGCAGCTAAGACACCCGTCTTTTGTGTATGTTCATCAACTTCTGGCCGGCATCGATGGTGACTaGCTTGGAGGAGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: QEQQLRHPSFVYVHQLLAGIDGD*LGGASA
Trigger: TGCTGAAGCTCCTCCAAGCAAGTCACCATCGATGCC...GGCCAGAAGTTGATGAACATACACAAAAGACGGGTGTCTTAGCTGCTGTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp GCTGATCCCCAACATCTGATGCAGTGTTCCAACCTAGCCTCCTGCTGGAACACTGCATGTGGATTTTGCTaGGAGTCATACGAATGGGAA +
Preference number: 5 (lower is better)
Translates to: ADPQHLMQCSNLASCWNTACGFC*ESYEWE
Trigger: TTCCCATTCGTATGACTCCAAGCAAAATCCACATGC...AGTGTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAGATGTTGGGGATCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR CAA 90 bp GGTACTAGTGTGAGTTATGAGGCCATCGGCATCCACTGGGCGATGCACAGCAGGGTCTCCAAATTGGCTTaGAACCCAAAACCACTTAAA +
Preference number: 5 (lower is better)
Translates to: GTSVSYEAIGIHWAMHSRVSKLA*NPKPLK
Trigger: TTTAAGTGGTTTTGGGTTCAAAGCCAATTTGGAGAC...CCTGCTGTGCATCGCCCAGTGGATGCCGATGGCCTCATAACTCACACTAGTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS TCA 90 bp ATGGGAAGTGACTGCCTGCAGAAAATTAGCCAAGCCCTCGAAAACTaGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATCTTGTT +
Preference number: 5 (lower is better)
Translates to: MGSDCLQKISQALEN*PAGLLDVSRLHHLV
Trigger: AACAAGATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGTCAGTTTTCGAGGGCTTGGCTAATTTTCTGCAGGCAGTCACTTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484164.6
CDS-3UTR CAA 90 bp CAATTCGCTATTCAATCTGGCCAAAACGGTGTTGGTTTCCTTATTACGTCTAATTCCAGCACCCGCCCGTaGACCACCACCTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: QFAIQSGQNGVGFLITSNSSTRP*TTTFLV
Trigger: CACCAAGAAGGTGGTGGTCAACGGGCGGGTGCTGGA...ATTAGACGTAATAAGGAAACCAACACCGTTTTGGCCAGATTGAATAGCGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp CATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACGGCATCGATGGTGACTaGCTTGGAGGAGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: HFLHVDFAWSHTNGNWMNGIDGD*LGGASA
Trigger: TGCTGAAGCTCCTCCAAGCAAGTCACCATCGATGCC...GTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000431346.6
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp TCAAATTGGGTCAGAGTTTGTGAGCTTGAAGAGCGTTCACTAAATGTCTCCCACGGCATCGATGGTGACTaGCTTGGAGGAGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: SNWVRVCELEERSLNVSHGIDGD*LGGASA
Trigger: TGCTGAAGCTCCTCCAAGCAAGTCACCATCGATGCC...GTGGGAGACATTTAGTGAACGCTCTTCAAGCTCACAAACTCTGACCCAATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431346.6
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp CAACATCTGATGCAGTGTTCCAACCTAGCCTCCTGCTGGAACACTGTGTCAACCGCATGTGGATTTTGCTaGGAGTCATACGAATGGGAA +
Preference number: 5 (lower is better)
Translates to: QHLMQCSNLASCWNTVSTACGFC*ESYEWE
Trigger: TTCCCATTCGTATGACTCCAAGCAAAATCCACATGC...GGTTGACACAGTGTTCCAGCAGGAGGCTAGGTTGGAACACTGCATCAGATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000431346.6
CDS-3UTR CAA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCAACTCCAGCCTGTTGTaGTCCTGTGGTGACTGTAAA +
Preference number: 5 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLNSSLL*SCGDCK
Trigger: TTTACAGTCACCACAGGACAACAACAGGCTGGAGTT...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp AATTGGCTTATAGGTGAGAGAATGGTCGAAGTTGTTCCAGTTGAACTTCCAGGGGTGCCTTTGCTCACATaGGCAGGAGCACTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: NWLIGERMVEVVPVELPGVPLLT*AGALAA
Trigger: AGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCAC...CCCTGGAAGTTCAACTGGAACAACTTCGACCATTCTCTCACCTATAAGCCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp TTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAAGCAAGTCAGTGCGACTaGCCAGTGCGACCCCTGAAA +
Preference number: 5 (lower is better)
Translates to: FPACGFCLESYEWELDEQASQCD*PVRPLK
Trigger: TTTCAGGGGTCGCACTGGCAAGTCGCACTGACTTGC...TTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CAA 90 bp CTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCATGTGTGTGGAGAAGTaGGTGGGGATTGCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: LHVDFAWSHTNGNWMNNSMCVEK*VGIAVV
Trigger: CACCACAGCAATCCCCACCAACTTCTCCACACACAT...GCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp CATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAATATGTGTGTGGAGAAGTaGGTGGGGATTGCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: HTNGNWMNNSSIRISWCNMCVEK*VGIAVV
Trigger: CACCACAGCAATCCCCACCAACTTCTCCACACACAT...ATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCCTGCATGTGGATTTaGCTTGGAGTCATACGAATG +
Preference number: 5 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPSCMWI*LGVIRM
Trigger: CATTCGTATGACTCCAAGCAAAATCCACATGCAGGA...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp AAAACAAGTATGTTCACAGTTAACGGCAATTGGCTTATAGGTGAGAGAATGGTCGTGAGGGCTGTGGTCTaGGAGGCACTGCAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: KTSMFTVNGNWLIGERMVVRAVV*EALQED
Trigger: ATCCTCCTGCAGTGCCTCCAAGACCACAGCCCTCAC...GACCATTCTCTCACCTATAAGCCAATTGCCGTTAACTGTGAACATACTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp TCTCCCACTGCTCACTGCTCTGATTCAGCTCAGGCCATGTCTGGTTTAGTGATGCAACTCGAAGAGAACTaGCAGGATCAGAAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: SPTAHCSDSAQAMSGLVMQLEEN*QDQKLF
Trigger: AAAAAGCTTCTGATCCTGCAAGTTCTCTTCGAGTTG...CATCACTAAACCAGACATGGCCTGAGCTGAATCAGAGCAGTGAGCAGTGGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626459.2
CDS-3UTR CAA 90 bp CATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAATGTGGAGCAAGTGGTGTaGTGCCTTTGCTCACATTGG +
Preference number: 5 (lower is better)
Translates to: HTNGNWMNNSSIRISWCNVEQVV*CLCSHW
Trigger: CCAATGTGAGCAAAGGCACAACACCACTTGCTCCAC...ATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCAGAGAATGGTCGAAGTaGTTCCAGTTGAACTTCCAG +
Preference number: 5 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPREWSK*FQLNFQ
Trigger: CTGGAAGTTCAACTGGAACAACTTCGACCATTCTCT...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTTAGCCATAGAAGCATaGCATATCCCAGATGCTAGG +
Preference number: 5 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPLAIEA*HIPDAR
Trigger: CCTAGCATCTGGGATATGCAATGCTTCTATGGCTAA...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCCTTGGAAGCTTGAGGTaGTCAGTTTCCCTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPLGSLR*SVSLVL
Trigger: AAGAACAAGGGAAACTGACAACCTCAAGCTTCCAAG...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR CAA 90 bp AGGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTGGATATGAGATCTaGGCCAAGTCATTTACCTTT +
Preference number: 5 (lower is better)
Translates to: RFRWWSKWCCAFAHIGRSTGYEI*AKSFTF
Trigger: AAAGGTAAATGACTTGGCCAAGATCTCATATCCAGT...GCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CAA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAAGCGCTTCCCGGAAAGTaGTGGGGCTTCGAACCTAAA +
Preference number: 5 (lower is better)
Translates to: TNTIYPPENAILTFLLSKALPGK*WGFEPK
Trigger: TTTAGGTTCGAAGCCCCACAACTTTCCGGGAAGCGC...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp TGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTTCTTCCAAAATAACCAAGTCTaGTTGCACCACAAAGCTCCA +
Preference number: 5 (lower is better)
Translates to: WCCAFAHIGRSTSSCLFFQNNQV*LHHKAP
Trigger: TGGAGCTTTGTGGTGCAACAAGACTTGGTTATTTTG...GAAGAAAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp AGGTTTAGGTGGTGGAGCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCATTCCTGTTCATTCTTaGAAGCAACAAATCTTGGCA +
Preference number: 5 (lower is better)
Translates to: RFRWWSKWCCAFAHIGRSIPVHS*KQQILA
Trigger: TGCCAAGATTTGTTGCTTCAAAGAATGAACAGGAAT...GCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGCTCCACCACCTAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAAGGCATCGATGGTGACTaGCTTGGAGGAGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: TNTIYPPENAILTFLLSKGIDGD*LGGASA
Trigger: TGCTGAAGCTCCTCCAAGCAAGTCACCATCGATGCC...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp TCCCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCCAACTCGAAGAGAACTaGCAGGATCAGAAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: SQMLGNRKGGCANKHNLPQLEEN*QDQKLF
Trigger: AAAAAGCTTCTGATCCTGCAAGTTCTCTTCGAGTTG...GGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAAGTGCCTTTGCTCACATaGGCAGGAGCACTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: TNTIYPPENAILTFLLSKVPLLT*AGALAA
Trigger: AGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCAC...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp CATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTAGTGGTGTTGTGCCTTaGCTCACATTGGCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: HVDFAWSHTNGNWMNNSSSGVVP*LTLAGA
Trigger: TGCTCCTGCCAATGTGAGCAAAGGCACAACACCACT...ACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp TGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTTCTTCTCGAAGTTGTTCCAGTaGAACTTCCAGGGAAATTCT +
Preference number: 5 (lower is better)
Translates to: WCCAFAHIGRSTSSCLFFSKLFQ*NFQGNS
Trigger: AGAATTTCCCTGGAAGTTCAACTGGAACAACTTCGA...GAAGAAAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS TCA 90 bp ATCATAACTACTGGATTGCCTACGAATTTCAATGGCAGTTGTAGCTaGTGCTACAGTTCGTACTGTTGTCTGGTCCTGGACAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: IITTGLPTNFNGSCS*CYSSYCCLVLDRSR
Trigger: CCTGCTTCTGTCCAGGACCAGACAACAGTACGAACTGTAGCATCAGCTACAACTGCCATTGAAATTCGTAGGCAATCCAGTAGTTATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000431346.6
ENST00000450536.7
ENST00000529597.5
ENST00000530575.1
CDS GCA 90 bp GAGGTGGTGGTGCAGTGTTATCAGGCGACGTTCCTGAATGAGACCTaGAAAATTCACCCCATGATAATTGGTCATACTACTGATATCAGA +
Preference number: 5 (lower is better)
Translates to: EVVVQCYQATFLNET*KIHPMIIGHTTDIR
Trigger: TCTGATATCAGTAGTATGACCAATTATCATGGGGTGAATTTTGCAGGTCTCATTCAGGAACGTCGCCTGATAACACTGCACCACCACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484164.6
CDS-3UTR CAA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTGACCACCACCTTCTaGGTGCTCTCAATGTCGCAG +
Preference number: 5 (lower is better)
Translates to: TNTIYPPENAILTFLLSKLTTTF*VLSMSQ
Trigger: CTGCGACATTGAGAGCACCAAGAAGGTGGTGGTCAA...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATGGATCCCTTTTTCACTaGCCCCCTGCCAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNGSLFH*PPARWW
Trigger: CCACCACCTGGCAGGGGGCAAGTGAAAAAGGGATCC...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp CTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATGGATCCCTTTTTCACTaGCCCCCTGCCAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LPNQSVWALSFQEVFLVNGSLFH*PPARWW
Trigger: CCACCACCTGGCAGGGGGCAAGTGAAAAAGGGATCC...ATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp GCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCCTCACTGCTGCATGTGGATTTTGCTaGGAGTCATACGAATGGGAA +
Preference number: 5 (lower is better)
Translates to: AWSHTNGNWMNNSSILTAACGFC*ESYEWE
Trigger: TTCCCATTCGTATGACTCCAAGCAAAATCCACATGC...AGCAGTGAGGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414243.1
ENST00000445570.5
CDS-3UTR CAA 90 bp TTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAAAACAACTCCAGCCTGTaGTTGTCCTGTGGTGACTGT +
Preference number: 5 (lower is better)
Translates to: FPACGFCLESYEWELDEQNNSSL*LSCGDC
Trigger: ACAGTCACCACAGGACAACAACAGGCTGGAGTTGTT...TTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp ACGAATGGGAACTGGATGAACAATAGCAGTATCCTCACTGCTCTGATTCAGCTCATCTGCAAAATTTGGTaGCTCTGGTATCTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: TNGNWMNNSSILTALIQLICKIW*LWYLLR
Trigger: CCTCAGCAGATACCAGAGCAACCAAATTTTGCAGAT...GAGCTGAATCAGAGCAGTGAGGATACTGCTATTGTTCATCCAGTTCCCATTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445570.5
CDS-3UTR CAA 90 bp TGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGATCTGCAAAATTTGGTaGCTCTGGTATCTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: WSHTNGNWMNNSSIRISWICKIW*LWYLLR
Trigger: CCTCAGCAGATACCAGAGCAACCAAATTTTGCAGAT...CCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp GCAAGTGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTGTTCGTCGTTTACATTaGATGCAGCAAATACTTCAA +
Preference number: 5 (lower is better)
Translates to: ASGVVPLLTLAGALAAVFVRRLH*MQQILQ
Trigger: TTGAAGTATTTGCTGCATCAAATGTAAACGACGAAC...AAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCACTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp TGGAATCCCAGTTACGCTGTGCAAACTTGGGCAAGTTGTATAACTTCTCTGTGCCTGGCCAAAACGGTGTaGGTTTCCTTATTACGTCTA +
Preference number: 5 (lower is better)
Translates to: WNPSYAVQTWASCITSLCLAKTV*VSLLRL
Trigger: TAGACGTAATAAGGAAACCAACACCGTTTTGGCCAG...GCACAGAGAAGTTATACAACTTGCCCAAGTTTGCACAGCGTAACTGGGATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CAA 90 bp TGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGAGAGAATGGTCGAAGTaGTTCCAGTTGAACTTCCAG +
Preference number: 5 (lower is better)
Translates to: WSHTNGNWMNNSSIRISWREWSK*FQLNFQ
Trigger: CTGGAAGTTCAACTGGAACAACTTCGACCATTCTCT...CCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS TCA 90 bp CACAGCCTTTCATCAGATCTCACTTTGCTTCTTACCTCTATTACATaGAGCCCTCCTGGCATACTCCTGCCTATTCCCATAATAGCAAAC +
Preference number: 5 (lower is better)
Translates to: HSLSSDLTLLLTSIT*SPPGILLPIPIIAN
Trigger: GTTTGCTATTATGGGAATAGGCAGGAGTATGCCAGGAGGGCTTCATGTAATAGAGGTAAGAAGCAAAGTGAGATCTGATGAAAGGCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492787.6
CDS-3UTR CAA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCATTCCTGTTCATTCTTaGAAGCAACAAATCTTGGCA +
Preference number: 5 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLIPVHS*KQQILA
Trigger: TGCCAAGATTTGTTGCTTCAAAGAATGAACAGGAAT...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp CAATTCGCTATTCAATCTGGCCAAAACGGTGTTGGTTTCCTTATTACGTCTAATATGTGTGTGGAGAAGTaGGTGGGGATTGCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: QFAIQSGQNGVGFLITSNMCVEK*VGIAVV
Trigger: CACCACAGCAATCCCCACCAACTTCTCCACACACAT...ATTAGACGTAATAAGGAAACCAACACCGTTTTGGCCAGATTGAATAGCGAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAACTACAGTTCGTACTGTaGTCTGGTCCTGGACAGAAG +
Preference number: 5 (lower is better)
Translates to: TNTIYPPENAILTFLLSKLQFVL*SGPGQK
Trigger: CTTCTGTCCAGGACCAGACAACAGTACGAACTGTAG...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR CAA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAAAACAACTCCAGCCTGTaGTTGTCCTGTGGTGACTGT +
Preference number: 5 (lower is better)
Translates to: TNTIYPPENAILTFLLSKNNSSL*LSCGDC
Trigger: ACAGTCACCACAGGACAACAACAGGCTGGAGTTGTT...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp CCAGATGCTAGGGAACAGAAAAGGTGGGTGTGCCAACAAACACAATCTACCCTCGTTCGTCGTTTACATTaGATGCAGCAAATACTTCAA +
Preference number: 5 (lower is better)
Translates to: PDAREQKRWVCQQTQSTLVRRLH*MQQILQ
Trigger: TTGAAGTATTTGCTGCATCAAATGTAAACGACGAAC...GAGGGTAGATTGTGTTTGTTGGCACACCCACCTTTTCTGTTCCCTAGCATCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp CTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTGCCTTTGCTCACATaGGCAGGAGCACTAGCAGCT +
Preference number: 5 (lower is better)
Translates to: LNLPNQSVWALSFQEVFLVPLLT*AGALAA
Trigger: AGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCAC...CAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp GTTCCAGTTGAACTTCCAGGGAAATTCTCTCCTCAAGAACATCCTTTAATTGTTAGTGGTGTTGTGCCTTaGCTCACATTGGCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: VPVELPGKFSPQEHPLIVSGVVP*LTLAGA
Trigger: TGCTCCTGCCAATGTGAGCAAAGGCACAACACCACT...AACAATTAAAGGATGTTCTTGAGGAGAGAATTTCCCTGGAAGTTCAACTGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAAAGTGGTGTTGTGCCTTaGCTCACATTGGCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKSGVVP*LTLAGA
Trigger: TGCTCCTGCCAATGTGAGCAAAGGCACAACACCACT...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp AGTTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGACTGGCCAAAACGGTGTaGGTTTCCTTATTACGTCTA +
Preference number: 5 (lower is better)
Translates to: SSISCMWILLGVIRMGTGLAKTV*VSLLRL
Trigger: TAGACGTAATAAGGAAACCAACACCGTTTTGGCCAG...TCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp TTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGCTGGCCAAAACGGTGTaGGTTTCCTTATTACGTCTA +
Preference number: 5 (lower is better)
Translates to: FHFLHVDFAWSHTNGNWMLAKTV*VSLLRL
Trigger: TAGACGTAATAAGGAAACCAACACCGTTTTGGCCAG...CATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp CTTTTTCAGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCATCATCTTGTTCGTGTCTCCAAATTGGCTTaGAACCCAAAACCACTTAAA +
Preference number: 5 (lower is better)
Translates to: LFQPAGLLDVSRLHHLVRVSKLA*NPKPLK
Trigger: TTTAAGTGGTTTTGGGTTCAAAGCCAATTTGGAGAC...ACGAACAAGATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGCTGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp TGGTGTTGTGCCTTTGCTCACATTGGCAGGAGCACTAGCAGCTGTCTTTTCTTCCTGAAATTGCCCTCTTaGGAACATCTTACCTTAAAA +
Preference number: 5 (lower is better)
Translates to: WCCAFAHIGRSTSSCLFFLKLPS*EHLTLK
Trigger: TTTTAAGGTAAGATGTTCCAAAGAGGGCAATTTCAG...GAAGAAAAGACAGCTGCTAGTGCTCCTGCCAATGTGAGCAAAGGCACAACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CAA 90 bp TGGAATCCCAGTTACGCTGTGCAAACTTGGGCAAGTTGTATAACTTCTCTGTGCACTTGTGTACCTCATTaGGGTGGCATGAAGTTTAAC +
Preference number: 5 (lower is better)
Translates to: WNPSYAVQTWASCITSLCTCVPH*GGMKFN
Trigger: GTTAAACTTCATGCCACCCAAATGAGGTACACAAGT...GCACAGAGAAGTTATACAACTTGCCCAAGTTTGCACAGCGTAACTGGGATTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CAA 90 bp AACCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTATCTTATGCGCTTCCCGGAAAGTaGTGGGGCTTCGAACCTAAA +
Preference number: 5 (lower is better)
Translates to: NHLLQYYQKRISPMNLSYALPGK*WGFEPK
Trigger: TTTAGGTTCGAAGCCCCACAACTTTCCGGGAAGCGC...ATAAGATAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR CAA 90 bp CTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGTTGACCACCACCTTCTaGGTGCTCTCAATGTCGCAG +
Preference number: 5 (lower is better)
Translates to: LNLPNQSVWALSFQEVFLLTTTF*VLSMSQ
Trigger: CTGCGACATTGAGAGCACCAAGAAGGTGGTGGTCAA...CAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp ACGAATGGGAACTGGATGAACAATAGCAGTATCAGGATCAGCTGGTGCAATGTTCAAAATAACCAAGTCTaGTTGCACCACAAAGCTCCA +
Preference number: 5 (lower is better)
Translates to: TNGNWMNNSSIRISWCNVQNNQV*LHHKAP
Trigger: TGGAGCTTTGTGGTGCAACAAGACTTGGTTATTTTG...AACATTGCACCAGCTGATCCTGATACTGCTATTGTTCATCCAGTTCCCATTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp GACATCATCAGAGCATCAGGGCTGCTGAATCTTCCAAATCAATCAGTTTGGGCAATCATAACTACTGGATaGCCTACGAATTTCAATGGC +
Preference number: 5 (lower is better)
Translates to: DIIRASGLLNLPNQSVWAIITTG*PTNFNG
Trigger: GCCATTGAAATTCGTAGGCAATCCAGTAGTTATGAT...TGCCCAAACTGATTGATTTGGAAGATTCAGCAGCCCTGATGCTCTGATGATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR CAA 90 bp TTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGCAACTCGAAGAGAACTaGCAGGATCAGAAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: FHFLHVDFAWSHTNGNWMQLEEN*QDQKLF
Trigger: AAAAAGCTTCTGATCCTGCAAGTTCTCTTCGAGTTG...CATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp GCTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGTGGAGCAAGTGGTGTaGTGCCTTTGCTCACATTGG +
Preference number: 5 (lower is better)
Translates to: AESSKSISLGIKLSGSFSVEQVV*CLCSHW
Trigger: CCAATGTGAGCAAAGGCACAACACCACTTGCTCCAC...AGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp GATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTATCCTCAGAGAATGGTCGAAGTaGTTCCAGTTGAACTTCCAG +
Preference number: 5 (lower is better)
Translates to: DFAWSHTNGNWMNNSSILREWSK*FQLNFQ
Trigger: CTGGAAGTTCAACTGGAACAACTTCGACCATTCTCT...GAGGATACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445570.5
CDS-3UTR CAA 90 bp CGCTGTGCAAACTTGGGCAAGTTGTATAACTTCTCTGTGCTTCAGTTTCTCCATAGAGACAGACTGAAATaGCCCTCTTTGGAACATCTT +
Preference number: 5 (lower is better)
Translates to: RCANLGKLYNFSVLQFLHRDRLK*PSLEHL
Trigger: AAGATGTTCCAAAGAGGGCAATTTCAGTCTGTCTCT...ATGGAGAAACTGAAGCACAGAGAAGTTATACAACTTGCCCAAGTTTGCACAGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CAA 90 bp AGTTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGAGTCCCAAATTCCATTTaGCATACTGTGCTTGGTCAT +
Preference number: 5 (lower is better)
Translates to: SSISCMWILLGVIRMGTGVPNSI*HTVLGH
Trigger: ATGACCAAGCACAGTATGCAAAATGGAATTTGGGAC...TCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CAA 90 bp GTAGAGCTTATGTCAATCTGTAGCAAGTCAACCCCTGCAATCAGCACTACAAACTTACGCTGTGCAAACTaGGGCAAGTTGTATAACTTC +
Preference number: 5 (lower is better)
Translates to: VELMSICSKSTPAISTTNLRCAN*GKLYNF
Trigger: GAAGTTATACAACTTGCCCAAGTTTGCACAGCGTAA...GTTTGTAGTGCTGATTGCAGGGGTTGACTTGCTACAGATTGACATAAGCTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CAA 90 bp CTGGAATCCCAGTTACGCTGTGCAAACTTGGGCAAGTTGTATAACTTCTCTGTGAAAGAAGGTATTTACTaGTGTACCTCATTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: LESQLRCANLGKLYNFSVKEGIY*CTSFGW
Trigger: CCACCCAAATGAGGTACACAAGTAAATACCTTCTTT...CACAGAGAAGTTATACAACTTGCCCAAGTTTGCACAGCGTAACTGGGATTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS GCA 90 bp AGGCACTGCAGGAGGATGGGCAACAACTCCAGCCTGTTGTTGTCCTaGATGAATACAAAAGTTCTTCTTTTTAGTAACTGTATAATCACT +
Preference number: 5 (lower is better)
Translates to: RHCRRMGNNSSLLLS*MNTKVLLFSNCIIT
Trigger: AGTGATTATACAGTTACTAAAAAGAAGAACTTTTGTATTCATGCAGGACAACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492787.6
ENST00000529423.1
CDS-3UTR CAA 90 bp TACTGTAACCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTAAACAACTCCAGCCTGTaGTTGTCCTGTGGTGACTGT +
Preference number: 5 (lower is better)
Translates to: YCNHLLQYYQKRISPMNLNNSSL*LSCGDC
Trigger: ACAGTCACCACAGGACAACAACAGGCTGGAGTTGTT...TAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGGTTACAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR CAA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAAATCTGCAAAATTTGGTaGCTCTGGTATCTGCTGAGG +
Preference number: 5 (lower is better)
Translates to: TNTIYPPENAILTFLLSKICKIW*LWYLLR
Trigger: CCTCAGCAGATACCAGAGCAACCAAATTTTGCAGAT...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp CATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTTCGAAGTTGTTCCAGTaGAACTTCCAGGGAAATTCT +
Preference number: 5 (lower is better)
Translates to: HVDFAWSHTNGNWMNNSSSKLFQ*NFQGNS
Trigger: AGAATTTCCCTGGAAGTTCAACTGGAACAACTTCGA...ACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp TTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATCGAAGTTGTTCCAGTaGAACTTCCAGGGAAATTCT +
Preference number: 5 (lower is better)
Translates to: FPACGFCLESYEWELDEQSKLFQ*NFQGNS
Trigger: AGAATTTCCCTGGAAGTTCAACTGGAACAACTTCGA...TTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATCAGAAAAACAGGTGTaGAGTAGTTTCCTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: TNTIYPPENAILTFLLSKSEKQV*SSFLGL
Trigger: AAGGCCCAGGAAACTACTCAACACCTGTTTTTCTGA...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR CAA 90 bp CATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACATCTACCTCATAAGATaGTTCAGAGGACTAAAGGAG +
Preference number: 5 (lower is better)
Translates to: HFLHVDFAWSHTNGNWMNIYLIR*FRGLKE
Trigger: CTCCTTTAGTCCTCTGAACAATCTTATGAGGTAGAT...GTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CAA 90 bp AATTGGCTTATAGGTGAGAGAATGGTCGAAGTTGTTCCAGTTGAACTTCCAGGGATTCCTGTTCATTCTTaGAAGCAACAAATCTTGGCA +
Preference number: 5 (lower is better)
Translates to: NWLIGERMVEVVPVELPGIPVHS*KQQILA
Trigger: TGCCAAGATTTGTTGCTTCAAAGAATGAACAGGAAT...CCCTGGAAGTTCAACTGGAACAACTTCGACCATTCTCTCACCTATAAGCCAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp GTTCCAGTTGAACTTCCAGGGAAATTCTCTCCTCAAGAACATCCTTTAATTGTTTCCTGCATGTGGATTTaGCTTGGAGTCATACGAATG +
Preference number: 5 (lower is better)
Translates to: VPVELPGKFSPQEHPLIVSCMWI*LGVIRM
Trigger: CATTCGTATGACTCCAAGCAAAATCCACATGCAGGA...AACAATTAAAGGATGTTCTTGAGGAGAGAATTTCCCTGGAAGTTCAACTGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAACTGGCCAAAACGGTGTaGGTTTCCTTATTACGTCTA +
Preference number: 5 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKLAKTV*VSLLRL
Trigger: TAGACGTAATAAGGAAACCAACACCGTTTTGGCCAG...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp AAGAGAACCATATATGTGATCTTGGAGGTATCTGAGGTCACATTCCTTCTCTTTCTGGCCAAAACGGTGTaGGTTTCCTTATTACGTCTA +
Preference number: 5 (lower is better)
Translates to: KRTIYVILEVSEVTFLLFLAKTV*VSLLRL
Trigger: TAGACGTAATAAGGAAACCAACACCGTTTTGGCCAG...AAAGAGAAGGAATGTGACCTCAGATACCTCCAAGATCACATATATGGTTCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526022.1
CDS-3UTR CAA 90 bp CAATTCGCTATTCAATCTGGCCAAAACGGTGTTGGTTTCCTTATTACGTCTAATTTAGCCATAGAAGCATaGCATATCCCAGATGCTAGG +
Preference number: 5 (lower is better)
Translates to: QFAIQSGQNGVGFLITSNLAIEA*HIPDAR
Trigger: CCTAGCATCTGGGATATGCAATGCTTCTATGGCTAA...ATTAGACGTAATAAGGAAACCAACACCGTTTTGGCCAGATTGAATAGCGAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000626459.2
CDS-3UTR CAA 90 bp TTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGTGTATTTGTCACAAGTaGACATGTAAAAGAGGCTTC +
Preference number: 5 (lower is better)
Translates to: FHFLHVDFAWSHTNGNWMCICHK*TCKRGF
Trigger: GAAGCCTCTTTTACATGTCAACTTGTGACAAATACA...CATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626459.2
CDS-3UTR CAA 90 bp AGTTCCATTTCCTGCATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGACTTGTATTAATGGTTTaGCATCCAATAGTAGGATGG +
Preference number: 5 (lower is better)
Translates to: SSISCMWILLGVIRMGTGLVLMV*HPIVGW
Trigger: CCATCCTACTATTGGATGCAAAACCATTAATACAAG...TCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATGCAGGAAATGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CAA 90 bp CATGTGGATTTTGCTTGGAGTCATACGAATGGGAACTGGATGAACAATAGCAGTATTCCTGTTCATTCTTaGAAGCAACAAATCTTGGCA +
Preference number: 5 (lower is better)
Translates to: HVDFAWSHTNGNWMNNSSIPVHS*KQQILA
Trigger: TGCCAAGATTTGTTGCTTCAAAGAATGAACAGGAAT...ACTGCTATTGTTCATCCAGTTCCCATTCGTATGACTCCAAGCAAAATCCACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAAATCATAACTACTGGATaGCCTACGAATTTCAATGGC +
Preference number: 5 (lower is better)
Translates to: TNTIYPPENAILTFLLSKIITTG*PTNFNG
Trigger: GCCATTGAAATTCGTAGGCAATCCAGTAGTTATGAT...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR CAA 90 bp TTATTTTCTTCTAAAAGGTCAGATGGTTTCACAAGTAATGGGCTAGTGGGATTTAACTCCAGCCTGTTGTaGTCCTGTGGTGACTGTAAA +
Preference number: 5 (lower is better)
Translates to: LFSSKRSDGFTSNGLVGFNSSLL*SCGDCK
Trigger: TTTACAGTCACCACAGGACAACAACAGGCTGGAGTT...AAATCCCACTAGCCCATTACTTGTGAAACCATCTGACCTTTTAGAAGAAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp CTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATAACTCCAGCCTGTTGTaGTCCTGTGGTGACTGTAAA +
Preference number: 5 (lower is better)
Translates to: LPNQSVWALSFQEVFLVNNSSLL*SCGDCK
Trigger: TTTACAGTCACCACAGGACAACAACAGGCTGGAGTT...ATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAAGTCTCCAAATTGGCTTaGAACCCAAAACCACTTAAA +
Preference number: 5 (lower is better)
Translates to: TNTIYPPENAILTFLLSKVSKLA*NPKPLK
Trigger: TTTAAGTGGTTTTGGGTTCAAAGCCAATTTGGAGAC...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp AAGAGAACCATATATGTGATCTTGGAGGTATCTGAGGTCACATTCCTTCTCTTTACCATATATGTGATCTaGGAGGTATCTGAGGTCACA +
Preference number: 5 (lower is better)
Translates to: KRTIYVILEVSEVTFLLFTIYVI*EVSEVT
Trigger: TGTGACCTCAGATACCTCCAAGATCACATATATGGT...AAAGAGAAGGAATGTGACCTCAGATACCTCCAAGATCACATATATGGTTCTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526022.1
CDS-3UTR CAA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATGCATGTGGATTTTGCTaGGAGTCATACGAATGGGAA +
Preference number: 5 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNACGFC*ESYEWE
Trigger: TTCCCATTCGTATGACTCCAAGCAAAATCCACATGC...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp TCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAAGCATGTGGATTTTGCTaGGAGTCATACGAATGGGAA +
Preference number: 5 (lower is better)
Translates to: SSKSISLGIKLSGSFSGKACGFC*ESYEWE
Trigger: TTCCCATTCGTATGACTCCAAGCAAAATCCACATGC...TTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp CCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATGCATGTGGATTTTGCTaGGAGTCATACGAATGGGAA +
Preference number: 5 (lower is better)
Translates to: PNQSVWALSFQEVFLVNHACGFC*ESYEWE
Trigger: TTCCCATTCGTATGACTCCAAGCAAAATCCACATGC...ATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp TTATTTTCTTCTAAAAGGTCAGATGGTTTCACAAGTAATGGGCTAGTGGGATTTTCCTGCATGTGGATTTaGCTTGGAGTCATACGAATG +
Preference number: 5 (lower is better)
Translates to: LFSSKRSDGFTSNGLVGFSCMWI*LGVIRM
Trigger: CATTCGTATGACTCCAAGCAAAATCCACATGCAGGA...AAATCCCACTAGCCCATTACTTGTGAAACCATCTGACCTTTTAGAAGAAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp TACTGTAACCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTACAACTCGAAGAGAACTaGCAGGATCAGAAGCTTTTT +
Preference number: 5 (lower is better)
Translates to: YCNHLLQYYQKRISPMNLQLEEN*QDQKLF
Trigger: AAAAAGCTTCTGATCCTGCAAGTTCTCTTCGAGTTG...TAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGGTTACAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR CAA 90 bp AAAACAAGTATGTTCACAGTTAACGGCAATTGGCTTATAGGTGAGAGAATGGTCGTCTCCAAATTGGCTTaGAACCCAAAACCACTTAAA +
Preference number: 5 (lower is better)
Translates to: KTSMFTVNGNWLIGERMVVSKLA*NPKPLK
Trigger: TTTAAGTGGTTTTGGGTTCAAAGCCAATTTGGAGAC...GACCATTCTCTCACCTATAAGCCAATTGCCGTTAACTGTGAACATACTTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp ACAAACACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATGTATTTGTCACAAGTaGACATGTAAAAGAGGCTTC +
Preference number: 5 (lower is better)
Translates to: TNTIYPPENAILTFLLSKCICHK*TCKRGF
Trigger: GAAGCCTCTTTTACATGTCAACTTGTGACAAATACA...TTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTGTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp CACAATCTACCCTCCAGAAAACGCCATCCTGACCTTTTTATTGTCGAAATTAAAATTAATCTTGGAAGCTaGAGGTTGTCAGTTTCCCTT +
Preference number: 5 (lower is better)
Translates to: HNLPSRKRHPDLFIVEIKINLGS*RLSVSL
Trigger: AAGGGAAACTGACAACCTCAAGCTTCCAAGATTAAT...TTTAATTTCGACAATAAAAAGGTCAGGATGGCGTTTTCTGGAGGGTAGATTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS-3UTR CAA 90 bp GTTCCAGTTGAACTTCCAGGGAAATTCTCTCCTCAAGAACATCCTTTAATTGTTAGGTTGCACTGCAAGTaGTGTTTCATAGGTTTAACA +
Preference number: 5 (lower is better)
Translates to: VPVELPGKFSPQEHPLIVRLHCK*CFIGLT
Trigger: TGTTAAACCTATGAAACACAACTTGCAGTGCAACCT...AACAATTAAAGGATGTTCTTGAGGAGAGAATTTCCCTGGAAGTTCAACTGGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CAA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATCAAAATAACCAAGTCTaGTTGCACCACAAAGCTCCA +
Preference number: 5 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNQNNQV*LHHKAP
Trigger: TGGAGCTTTGTGGTGCAACAAGACTTGGTTATTTTG...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp CCATCTGCTACAGTATTACCAGAAGCGAATTTCACCGATGAATTTATCTTATTTCAAAATAACCAAGTCTaGTTGCACCACAAAGCTCCA +
Preference number: 5 (lower is better)
Translates to: PSATVLPEANFTDEFILFQNNQV*LHHKAP
Trigger: TGGAGCTTTGTGGTGCAACAAGACTTGGTTATTTTG...AAATAAGATAAATTCATCGGTGAAATTCGCTTCTGGTAATACTGTAGCAGATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445570.5
ENST00000626459.2
CDS-3UTR CAA 90 bp TTATTTTCTTCTAAAAGGTCAGATGGTTTCACAAGTAATGGGCTAGTGGGATTTTTGAAGCAACAAATCTaGGCAGAGGAAGGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: LFSSKRSDGFTSNGLVGFLKQQI*AEEGPL
Trigger: TAAAGGACCTTCCTCTGCCAAGATTTGTTGCTTCAA...AAATCCCACTAGCCCATTACTTGTGAAACCATCTGACCTTTTAGAAGAAAATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATTTGAAGCAACAAATCTaGGCAGAGGAAGGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNLKQQI*AEEGPL
Trigger: TAAAGGACCTTCCTCTGCCAAGATTTGTTGCTTCAA...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp CTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATTTGAAGCAACAAATCTaGGCAGAGGAAGGTCCTTTA +
Preference number: 5 (lower is better)
Translates to: LPNQSVWALSFQEVFLVNLKQQI*AEEGPL
Trigger: TAAAGGACCTTCCTCTGCCAAGATTTGTTGCTTCAA...ATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS-3UTR CAA 90 bp GCTGAATCTTCCAAATCAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTTTAAAAGAGTACTGGTaGGTGGAGTATCTGCAAAAC +
Preference number: 5 (lower is better)
Translates to: AESSKSISLGIKLSGSFSLKEYW*VEYLQN
Trigger: GTTTTGCAGATACTCCACCAACCAGTACTCTTTTAA...AGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTGATTTGGAAGATTCAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000530575.1
CDS-3UTR CAA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATTCGAAGTTGTTCCAGTaGAACTTCCAGGGAAATTCT +
Preference number: 5 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNSKLFQ*NFQGNS
Trigger: AGAATTTCCCTGGAAGTTCAACTGGAACAACTTCGA...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450536.7
ENST00000626459.2
CDS-3UTR CAA 90 bp CAATCAGTTTGGGCATTAAGCTTTCAGGAAGTTTTTCTGGTAAATCATAGCCATGGAATTTCAAATAAATaGGGGAACAGTGCATGTGTC +
Preference number: 5 (lower is better)
Translates to: QSVWALSFQEVFLVNHSHGISNK*GNSACV
Trigger: GACACATGCACTGTTCCCCAATTTATTTGAAATTCC...ATGGCTATGATTTACCAGAAAAACTTCCTGAAAGCTTAATGCCCAAACTGATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483468.5
CDS-3UTR CAA 90 bp AGCAAAAGAATGAGTGACAAGATGGCTAAAGGTAAACTAGAAATCCTAAGGAATTTAAAAGAGTACTGGTaGGTGGAGTATCTGCAAAAC +
Preference number: 5 (lower is better)
Translates to: SKRMSDKMAKGKLEILRNLKEYW*VEYLQN
Trigger: GTTTTGCAGATACTCCACCAACCAGTACTCTTTTAA...ATTCCTTAGGATTTCTAGTTTACCTTTAGCCATCTTGTCACTCATTCTTTTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450536.7
CDS TCA 90 bp ATAGATTACAGAATATCATCTCCATTAAATAGGCAGACTTTGTTCTaGGCTAGACTGACTATACTACAGTTAAAGGCAGAGAAATGGGTT +
Preference number: 5 (lower is better)
Translates to: IDYRISSPLNRQTLF*ARLTILQLKAEKWV
Trigger: AACCCATTTCTCTGCCTTTAACTGTAGTATAGTCAGTCTAGCTCAGAACAAAGTCTGCCTATTTAATGGAGATGATATTCTGTAATCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530370.1
CDS-3UTR CAA 90 bp TTATTTTCTTCTAAAAGGTCAGATGGTTTCACAAGTAATGGGCTAGTGGGATTTGTTCGTCGTTTACATTaGATGCAGCAAATACTTCAA +
Preference number: 5 (lower is better)
Translates to: LFSSKRSDGFTSNGLVGFVRRLH*MQQILQ
Trigger: TTGAAGTATTTGCTGCATCAAATGTAAACGACGAAC...AAATCCCACTAGCCCATTACTTGTGAAACCATCTGACCTTTTAGAAGAAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000445570.5
ENST00000483468.5
ENST00000626459.2
CDS GCA 72 bp CCCGAAAACGCCGGCCCCGGCCTCACACGCGCCAGGTaGGCCCGAGCAACAGGGCCCGGAGGTCGCGAGGAG +
Preference number: 6 (lower is better)
Translates to: PENAGPGLTRAR*ARATGPGGREE
Trigger: CTCCTCGCGACCTCCGGGCCCTGTTGCTCGGGCGCACCTGGCGCGTGTGAGGCCGGGGCCGGCGTTTTCGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000258062.9
ENST00000409812.6
ENST00000445570.5
ENST00000450536.7
ENST00000483468.5
ENST00000626459.2
CDS GCA 72 bp AGCACTCCAGCCTGTAGGACCACGTCGTTCGGCAGCTaGGCGGCCCGGAACAGCTCCAGCACCCGCCCGTTG +
Preference number: 6 (lower is better)
Translates to: STPACRTTSFGS*AARNSSSTRPL
Trigger: CAACGGGCGGGTGCTGGAGCTGTTCCGGGCCGCGCAGCTGCCGAACGACGTGGTCCTACAGGCTGGAGTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531675.1
CDS CAA 72 bp AGCTGCGCGGCCCGGAACAGCTCCAGCACCCGCCCGTaGACCACCACCTTCTTGGTGCTCTCAATGTCGCAG +
Preference number: 6 (lower is better)
Translates to: SCAARNSSSTRP*TTTFLVLSMSQ
Trigger: CTGCGACATTGAGAGCACCAAGAAGGTGGTGGTCAACGGGCGGGTGCTGGAGCTGTTCCGGGCCGCGCAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000445570.5
ENST00000450536.7
ENST00000483468.5
ENST00000529597.5
ENST00000531675.1
ENST00000626459.2
CDS CCA 72 bp CACGCCTCCGGAGCGGCAGCGCTTCCCGGAAAGTTGTaGGGCTTCGAACCTAAAGTTTCGGGGGATCTGGGC +
Preference number: 6 (lower is better)
Translates to: HASGAAALPGKL*GFEPKVSGDLG
Trigger: GCCCAGATCCCCCGAAACTTTAGGTTCGAAGCCCCACAACTTTCCGGGAAGCGCTGCCGCTCCGGAGGCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000258062.9
ENST00000445570.5
ENST00000450536.7
ENST00000626459.2
CDS CCA 72 bp CAGGTCCCGCGAGAGGCCTCTCACTATTCCCACCGCTaGGATGACGGCTGTGCTTCCTCCATGTGTGTGGAG +
Preference number: 6 (lower is better)
Translates to: QVPREASHYSHR*DDGCASSMCVE
Trigger: CTCCACACACATGGAGGAAGCACAGCCGTCATCCCAGCGGTGGGAATAGTGAGAGGCCTCTCGCGGGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000445570.5
ENST00000450536.7
ENST00000483468.5
ENST00000529597.5
ENST00000626459.2
CDS CAA 72 bp GTCCACGCCTCCGGAGCGGCAGCGCTTCCCGGAAAGTaGTGGGGCTTCGAACCTAAAGTTTCGGGGGATCTG +
Preference number: 6 (lower is better)
Translates to: VHASGAAALPGK*WGFEPKVSGDL
Trigger: CAGATCCCCCGAAACTTTAGGTTCGAAGCCCCACAACTTTCCGGGAAGCGCTGCCGCTCCGGAGGCGTGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000258062.9
ENST00000445570.5
ENST00000450536.7
ENST00000626459.2
CDS TCA 72 bp CCCGCGAGAGGCCTCTCACTATTCCCACCGCTGGGATaGCGGCTGTGCTTCCTCCATGTGTGTGGAGAAGTT +
Preference number: 6 (lower is better)
Translates to: PARGLSLFPPLG*RLCFLHVCGEV
Trigger: AACTTCTCCACACACATGGAGGAAGCACAGCCGTCATCCCAGCGGTGGGAATAGTGAGAGGCCTCTCGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000445570.5
ENST00000450536.7
ENST00000483468.5
ENST00000529597.5
ENST00000626459.2
CDS CAA 90 bp CACCGCTGGGATGACGGCTGTGCTTCCTCCATGTGTGTGGAGAAGTaGGTGGGGATTGCTGTGGTGAAACTACTGGGGATGCAGGTTCCT +
Preference number: 6 (lower is better)
Translates to: HRWDDGCASSMCVEK*VGIAVVKLLGMQVP
Trigger: AGGAACCTGCATCCCCAGTAGTTTCACCACAGCAATCCCCACCAACTTCTCCACACACATGGAGGAAGCACAGCCGTCATCCCAGCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000445570.5
ENST00000450536.7
ENST00000483468.5
ENST00000529597.5
ENST00000626459.2
CDS CCA 72 bp TGTGAGGGCTGTGGTCTTGGAGGCACTGCAGGAGGATaGGCAACAACTCCAGCCTGTTGTTGTCCTACAGTA +
Preference number: 6 (lower is better)
Translates to: CEGCGLGGTAGG*ATTPACCCPTV
Trigger: TACTGTAGGACAACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGACCACAGCCCTCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000409812.6
ENST00000530255.1
CDS TCA 72 bp CCATGTGTGTGGAGAAGTTGGTGGGGATTGCTGTGGTaGAACTACTGGGGATGCAGGTTCCTGTGCATCTGC +
Preference number: 6 (lower is better)
Translates to: PCVWRSWWGLLW*NYWGCRFLCIC
Trigger: GCAGATGCACAGGAACCTGCATCCCCAGTAGTTTCACCACAGCAATCCCCACCAACTTCTCCACACACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000445570.5
ENST00000450536.7
ENST00000483468.5
ENST00000529597.5
ENST00000626459.2
CDS CAA 72 bp GATGACGGCTGTGCTTCCTCCATGTGTGTGGAGAAGTaGGTGGGGATTGCTGTGGTGAAACTACTGGGGATG +
Preference number: 6 (lower is better)
Translates to: DDGCASSMCVEK*VGIAVVKLLGM
Trigger: CATCCCCAGTAGTTTCACCACAGCAATCCCCACCAACTTCTCCACACACATGGAGGAAGCACAGCCGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000445570.5
ENST00000450536.7
ENST00000483468.5
ENST00000529597.5
ENST00000626459.2
CDS GCA 72 bp TGCTTCCTCCATGTGTGTGGAGAAGTTGGTGGGGATTaGTGTGGTGAAACTACTGGGGATGCAGGTTCCTGT +
Preference number: 6 (lower is better)
Translates to: CFLHVCGEVGGD*CGETTGDAGSC
Trigger: ACAGGAACCTGCATCCCCAGTAGTTTCACCACAGCAATCCCCACCAACTTCTCCACACACATGGAGGAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000445570.5
ENST00000450536.7
ENST00000483468.5
ENST00000529597.5
ENST00000626459.2
CDS TCA 72 bp GACTGCCTGCAGAAAATTAGCCAAGCCCTCGAAAACTaGCCGGCAGGACTTCTGGATGTTTCTCGGCTTCAT +
Preference number: 6 (lower is better)
Translates to: DCLQKISQALEN*PAGLLDVSRLH
Trigger: ATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGTCAGTTTTCGAGGGCTTGGCTAATTTTCTGCAGGCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484164.6
CDS CCA 72 bp TTAGCCAAGCCCTCGAAAACTGACCGGCAGGACTTCTaGATGTTTCTCGGCTTCATCATCTTGTTCGTCGTT +
Preference number: 6 (lower is better)
Translates to: LAKPSKTDRQDF*MFLGFIILFVV
Trigger: AACGACGAACAAGATGATGAAGCCGAGAAACATCCAGAAGTCCTGCCGGTCAGTTTTCGAGGGCTTGGCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484164.6
CDS TCA 72 bp CCAGGTGGTGGGGGAATTACACCAGAATACGACCCTTaGTTTTCAGAATCTGAAGAATATGAGGCTGCATGG +
Preference number: 6 (lower is better)
Translates to: PGGGGITPEYDP*FSESEEYEAAW
Trigger: CCATGCAGCCTCATATTCTTCAGATTCTGAAAATCAAGGGTCGTATTCTGGTGTAATTCCCCCACCACCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000445570.5
ENST00000450536.7
ENST00000483468.5
ENST00000529597.5
ENST00000626459.2
CDS TCA 72 bp ACTGGATTGCCTACGAATTTCAATGGCAGTTGTAGCTaGTGCTACAGTTCGTACTGTTGTCTGGTCCTGGAC +
Preference number: 6 (lower is better)
Translates to: TGLPTNFNGSCS*CYSSYCCLVLD
Trigger: GTCCAGGACCAGACAACAGTACGAACTGTAGCATCAGCTACAACTGCCATTGAAATTCGTAGGCAATCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000431346.6
ENST00000450536.7
ENST00000529597.5
ENST00000530575.1
CDS CCA 72 bp GTACTGTTGTCTGGTCCTGGACAGAAGCAGGATGCATaGTTAAAAGAGTACTGGTTGGTGGAGTATCTGCAA +
Preference number: 6 (lower is better)
Translates to: VLLSGPGQKQDA*LKEYWLVEYLQ
Trigger: TTGCAGATACTCCACCAACCAGTACTCTTTTAACCATGCATCCTGCTTCTGTCCAGGACCAGACAACAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000450536.7
ENST00000529597.5
ENST00000530575.1
CDS CAA 72 bp CTTTTTCAGCTGATGTCCCCTCTAATATCTGCTCTGTaGACACAACATGGTATGGGAAGTGACTGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: LFQLMSPLISAL*TQHGMGSDCLQ
Trigger: CTGCAGGCAGTCACTTCCCATACCATGTTGTGTCAACAGAGCAGATATTAGAGGGGACATCAGCTGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484164.6
CDS CAA 90 bp TGGTCTTGGAGGCACTGCAGGAGGATGGGCAACAACTCCAGCCTGTaGTTGTCCTGCATGAATACAAAAGTTCTTCTTTTTAGTAACTGT +
Preference number: 6 (lower is better)
Translates to: WSWRHCRRMGNNSSL*LSCMNTKVLLFSNC
Trigger: ACAGTTACTAAAAAGAAGAACTTTTGTATTCATGCAGGACAACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492787.6
ENST00000529423.1
CDS CAA 72 bp AGGCACTGCAGGAGGATGGGCAACAACTCCAGCCTGTaGTTGTCCTGCATGAATACAAAAGTTCTTCTTTTT +
Preference number: 6 (lower is better)
Translates to: RHCRRMGNNSSL*LSCMNTKVLLF
Trigger: AAAAAGAAGAACTTTTGTATTCATGCAGGACAACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492787.6
ENST00000529423.1
CDS TCA 72 bp GCTCCCGATCTGTTCTGGGTCAGAAGTAAAAGAGTCTaGACTACTGTAACCATCTACAGTATTACCAGAAGC +
Preference number: 6 (lower is better)
Translates to: APDLFWVRSKRV*TTVTIYSITRS
Trigger: GCTTCTGGTAATACTGTAGATGGTTACAGTAGTTCAGACTCTTTTACTTCTGACCCAGAACAGATCGGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258062.9
ENST00000529597.5
CDS TCA 72 bp TCATCAGATCTCACTTTGCTTCTTACCTCTATTACATaGAGCCCTCCTGGCATACTCCTGCCTATTCCCATA +
Preference number: 6 (lower is better)
Translates to: SSDLTLLLTSIT*SPPGILLPIPI
Trigger: TATGGGAATAGGCAGGAGTATGCCAGGAGGGCTTCATGTAATAGAGGTAAGAAGCAAAGTGAGATCTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492787.6
CDS GCA 72 bp GTGCAGTGTTATCAGGCGACGTTCCTGAATGAGACCTaGAAAATTCACCCCATGATAATTGGTCATACTACT +
Preference number: 6 (lower is better)
Translates to: VQCYQATFLNET*KIHPMIIGHTT
Trigger: AGTAGTATGACCAATTATCATGGGGTGAATTTTGCAGGTCTCATTCAGGAACGTCGCCTGATAACACTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484164.6
CDS CAA 72 bp CACTGCAGGAGGATGGGCAACAACTCCAGCCTGTTGTaGTCCTGCATGAATACAAAAGTTCTTCTTTTTAGT +
Preference number: 6 (lower is better)
Translates to: HCRRMGNNSSLL*SCMNTKVLLFS
Trigger: ACTAAAAAGAAGAACTTTTGTATTCATGCAGGACAACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492787.6
ENST00000529423.1
CDS CAA 90 bp TCTTGGAGGCACTGCAGGAGGATGGGCAACAACTCCAGCCTGTTGTaGTCCTGCATGAATACAAAAGTTCTTCTTTTTAGTAACTGTATA +
Preference number: 6 (lower is better)
Translates to: SWRHCRRMGNNSSLL*SCMNTKVLLFSNCI
Trigger: TATACAGTTACTAAAAAGAAGAACTTTTGTATTCATGCAGGACAACAACAGGCTGGAGTTGTTGCCCATCCTCCTGCAGTGCCTCCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492787.6
ENST00000529423.1
CDS CCA 72 bp CACTTTGCTTCTTACCTCTATTACATGAAGCCCTCCTaGCATACTCCTGCCTATTCCCATAATAGCAAACAA +
Preference number: 6 (lower is better)
Translates to: HFASYLYYMKPS*HTPAYSHNSKQ
Trigger: TTGTTTGCTATTATGGGAATAGGCAGGAGTATGCCAGGAGGGCTTCATGTAATAGAGGTAAGAAGCAAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492787.6
CDS CAA 72 bp AATATGAGGCTGCATGGCGAGATTCCTGTTCATTCTTaGAAGCAACAAATCTTGGCAGAGGAAGGTCCTTTA +
Preference number: 6 (lower is better)
Translates to: NMRLHGEIPVHS*KQQILAEEGPL
Trigger: TAAAGGACCTTCCTCTGCCAAGATTTGTTGCTTCAAAGAATGAACAGGAATCTCGCCATGCAGCCTCATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000445570.5
ENST00000450536.7
ENST00000483468.5
ENST00000529597.5
ENST00000626459.2
CDS CAA 90 bp AATCTGAAGAATATGAGGCTGCATGGCGAGATTCCTGTTCATTCTTaGAAGCAACAAATCTTGGCAGAGGAAGGTCCTTTACTGTATTTA +
Preference number: 6 (lower is better)
Translates to: NLKNMRLHGEIPVHS*KQQILAEEGPLLYL
Trigger: TAAATACAGTAAAGGACCTTCCTCTGCCAAGATTTGTTGCTTCAAAGAATGAACAGGAATCTCGCCATGCAGCCTCATATTCTTCAGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000445570.5
ENST00000450536.7
ENST00000483468.5
ENST00000529597.5
ENST00000626459.2
CDS TCA 72 bp AACACTTCACTTTTCCTCACCATTCTAAACTCACAGTaGCTAAAACATAACTTCATCATCCTCTGCCCTAAC +
Preference number: 6 (lower is better)
Translates to: NTSLFLTILNSQ*LKHNFIILCPN
Trigger: GTTAGGGCAGAGGATGATGAAGTTATGTTTTAGTCACTGTGAGTTTAGAATGGTGAGGAAAAGTGAAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492787.6
CDS CAA 72 bp GGCGAGATTCCTGTTCATTCTTTGAAGCAACAAATCTaGGCAGAGGAAGGTCCTTTACTGTATTTATACTTT +
Preference number: 6 (lower is better)
Translates to: GEIPVHSLKQQI*AEEGPLLYLYF
Trigger: AAAGTATAAATACAGTAAAGGACCTTCCTCTGCCAAGATTTGTTGCTTCAAAGAATGAACAGGAATCTCGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000258062.9
ENST00000367663.8
ENST00000409812.6
ENST00000415951.6
ENST00000445570.5
ENST00000450536.7
ENST00000483468.5
ENST00000529597.5
ENST00000626459.2
CDS TCA 72 bp AGAATATCATCTCCATTAAATAGGCAGACTTTGTTCTaGGCTAGACTGACTATACTACAGTTAAAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: RISSPLNRQTLF*ARLTILQLKAE
Trigger: CTCTGCCTTTAACTGTAGTATAGTCAGTCTAGCTCAGAACAAAGTCTGCCTATTTAATGGAGATGATATTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530370.1
CDS TCA 72 bp TTACACTTGGCTAAGCAGCAAAGGATCTTATTAGCATaGCATTTTCTCAACACTCAAGTATGTAAGTGTTAC +
Preference number: 6 (lower is better)
Translates to: LHLAKQQRILLA*HFLNTQVCKCY
Trigger: GTAACACTTACATACTTGAGTGTTGAGAAAATGTCATGCTAATAAGATCCTTTGCTGCTTAGCCAAGTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484164.6