Pregenerated sensors for REP15 (Homo sapiens)
Ensembl gene IDs: ENSG00000174236Ensembl transcript IDs: ENST00000310791.4
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACCACAGCCTTCCCTCCTaGCAGATGGCTCCTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENHSLPS*QMAPHH Trigger: ATGGTGAGGAGCCATCTGCCAGGAGGGAAGGCTGTG...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR TCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACGTTTCCAGGACAAACTaGGCCACAGCCTTCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENVSRTN*ATAFPP Trigger: AGGAGGGAAGGCTGTGGCTCAGTTTGTCCTGGAAAC...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR TCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACTGGCTCCTCACCATCTaGCTTTTGACACTGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENWLLTI*LLTLSR Trigger: CCTGGACAGTGTCAAAAGTCAGATGGTGAGGAGCCA...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR CCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACGGTGCTTGGTCATCTTaGTGGTGGTCAGCCACTCAT | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENGAWSS*WWSATH Trigger: ATGAGTGGCTGACCACCACCAAGATGACCAAGCACC...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR CCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACGGAAGGCTTGGTGCTTaGTCATCTTGGTGGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENGRLGA*SSWWWS Trigger: TGACCACCACCAAGATGACCAAGCACCAAGCCTTCC...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR GCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACAACAGGAAGGCTTGGTaGTTGGTCATCTTGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENNRKAW*LVILVV Trigger: CACCACCAAGATGACCAAGCACCAAGCCTTCCTGTT...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR GCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACGGTCCAAATCCAGTCTaGACCAAACAGGAAGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENGPNPV*TKQEGL Trigger: CAAGCCTTCCTGTTTGGTGCAGACTGGATTTGGACC...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR CCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACGCTTGGTCATCTTGGTaGTGGTCAGCCACTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENAWSSW*WSATHQ Trigger: TTGATGAGTGGCTGACCACCACCAAGATGACCAAGC...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR TCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACAGACTCCTCTACCCTTaGTTCTGGATTGGAAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENRLLYP*FWIGKV Trigger: GACCTTTCCAATCCAGAATCAAGGGTAGAGGAGTCT...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR TCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACTCACCATCTGACTTTTaGCACTGTCCAGGACAACTC | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENSPSDF*HCPGQL Trigger: GAGTTGTCCTGGACAGTGTCAAAAGTCAGATGGTGA...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR GCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACTGTTGCGATGCTTTCTaGCCCATTTTCTCTGCATCC | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENCCDAF*PIFSAS Trigger: GGATGCAGAGAAAATGGGGCAGAAAGCATCGCAACA...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR GCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACAGCCAACTGTTGCGATaGTTTCTGCCCCATTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENSQLLR*FLPHFL Trigger: GAGAAAATGGGGCAGAAAGCATCGCAACAGTTGGCT...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR GCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACTTCAGAGCCAACTGTTaGGATGCTTTCTGCCCCATT | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENFRANC*DAFCPI Trigger: AATGGGGCAGAAAGCATCGCAACAGTTGGCTCTGAA...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR TCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACTACTCCTTCAGTTTCTaGGCTGCATGGACTATAGCT | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENYSFSF*AAWTIA Trigger: AGCTATAGTCCATGCAGCTCAGAAACTGAAGGAGTA...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR TCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACGTCTGTACTGCGAGCTaGAGCTTTATTTGCTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENVCTAS*SFICLL Trigger: CAACAAGCAAATAAAGCTTCAGCTCGCAGTACAGAC...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR TCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACCAAGTCAGAGAATGCTaGTATAAACCTTGCCCACCT | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENQVREC*YKPCPP Trigger: AGGTGGGCAAGGTTTATATCAGCATTCTCTGACTTG...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR GCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACCTTCAGTTTCTGAGCTaGATGGACTATAGCTTCACT | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENLQFLS*MDYSFT Trigger: AGTGAAGCTATAGTCCATGCAGCTCAGAAACTGAAG...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR GCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACCTCATTCAGAGTATTTaGAGCTGGGCAGAGTTTACT | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENLIQSI*SWAEFT Trigger: AGTAAACTCTGCCCAGCTGCAAATACTCTGAATGAG...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR TCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACTCTGTAATTGCGACATaGATGTACTTTGATCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENSVIAT*MYFDPS Trigger: ACTGGGATCAAAGTACATTCATGTCGCAATTACAGA...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR CCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACTGGGCAGAGTTTACTTaGAGGATATTCAAATCCAAG | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENWAEFT*RIFKSK Trigger: CTTGGATTTGAATATCCTCCAAGTAAACTCTGCCCA...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR CCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACTCAACTCCCTTTTCTTaGCAGAAAGTGATGAAATGG | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENSTPFS*QKVMKW Trigger: CCATTTCATCACTTTCTGCCAAGAAAAGGGAGTTGA...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR CCA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACGTCTTTAGGCTTTCCTaGCATACCAAAGATGATAAA | + |
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Preference number: 4 (lower is better) Translates to: LRHECTLIPVIIFNQWENVFRLS*HTKDDK Trigger: TTTATCATCTTTGGTATGCCAGGAAAGCCTAAAGAC...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS CCA 90 bp | ACAATCTTCAGTTTCCAGGACAAACTGAGCCACAGCCTTCCCTCCTaGCAGATGGCTCCTCACCATCTGACTTTTGACACTGTCCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: TIFSFQDKLSHSLPS*QMAPHHLTFDTVQD Trigger: GTCCTGGACAGTGTCAAAAGTCAGATGGTGAGGAGCCATCTGCCAGGAGGGAAGGCTGTGGCTCAGTTTGTCCTGGAAACTGAAGATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS CCA 90 bp | AAAAGGTCCAAATCCAGTCTGCACCAAACAGGAAGGCTTGGTGCTTaGTCATCTTGGTGGTGGTCAGCCACTCATCAACTCCCTTTTCTT | + |
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Preference number: 5 (lower is better) Translates to: KRSKSSLHQTGRLGA*SSWWWSATHQLPFL Trigger: AAGAAAAGGGAGTTGATGAGTGGCTGACCACCACCAAGATGACCAAGCACCAAGCCTTCCTGTTTGGTGCAGACTGGATTTGGACCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS TCA 90 bp | TTCTGGATTGGAAAGGTCACAAGGCTTAGATTCCACAGGAGGAGGTaGAGACATCTGCAGAGTCTGTACTGCGAGCTGAAGCTTTATTTG | + |
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Preference number: 5 (lower is better) Translates to: FWIGKVTRLRFHRRR*RHLQSLYCELKLYL Trigger: CAAATAAAGCTTCAGCTCGCAGTACAGACTCTGCAGATGTCTTCACCTCCTCCTGTGGAATCTAAGCCTTGTGACCTTTCCAATCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS CCA 90 bp | TTTGACACTGTCCAGGACAACTCCCCTGATGTCTTTAGGCTTTCCTaGCATACCAAAGATGATAAACAGACCCAGGCAATCCTCTCCTAT | + |
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Preference number: 5 (lower is better) Translates to: FDTVQDNSPDVFRLS*HTKDDKQTQAILSY Trigger: ATAGGAGAGGATTGCCTGGGTCTGTTTATCATCTTTGGTATGCCAGGAAAGCCTAAAGACATCAGGGGAGTTGTCCTGGACAGTGTCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS TCA 90 bp | AGTTTACTTGGAGGATATTCAAATCCAAGGTACTCCTTCAGTTTCTaGGCTGCATGGACTATAGCTTCACTGACCACCTCACAGACGACG | + |
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Preference number: 5 (lower is better) Translates to: SLLGGYSNPRYSFSF*AAWTIASLTTSQTT Trigger: CGTCGTCTGTGAGGTGGTCAGTGAAGCTATAGTCCATGCAGCTCAGAAACTGAAGGAGTACCTTGGATTTGAATATCCTCCAAGTAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS TCA 90 bp | CAGCTTATCAAATCTACTTTTCTTCCAGGAAGACTCCTCTACCCTTaGTTCTGGATTGGAAAGGTCACAAGGCTTAGATTCCACAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: QLIKSTFLPGRLLYP*FWIGKVTRLRFHRR Trigger: CCTCCTGTGGAATCTAAGCCTTGTGACCTTTCCAATCCAGAATCAAGGGTAGAGGAGTCTTCCTGGAAGAAAAGTAGATTTGATAAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS TCA 90 bp | CTCTTACAGGCCACTCACATAATACATATCCAAGTCAGAGAATGCTaGTATAAACCTTGCCCACCTCTCTCAGCCCGTCTTTCTTACTCA | + |
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Preference number: 5 (lower is better) Translates to: LLQATHIIHIQVREC*YKPCPPLSARLSYS Trigger: TGAGTAAGAAAGACGGGCTGAGAGAGGTGGGCAAGGTTTATATCAGCATTCTCTGACTTGGATATGTATTATGTGAGTGGCCTGTAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR CAA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACACGACGGGCACCTCTTaGCTGTCCTTCAGAGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: LRHECTLIPVIIFNQWENTTGTS*LSFRAN Trigger: GTTGGCTCTGAAGGACAGCAAAGAGGTGCCCGTCGT...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS CCA 90 bp | GTCAGCCACTCATCAACTCCCTTTTCTTGGCAGAAAGTGATGAAATaGATTAAGAAGATCTCATTCAGAGTATTTGCAGCTGGGCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: VSHSSTPFSWQKVMK*IKKISFRVFAAGQS Trigger: ACTCTGCCCAGCTGCAAATACTCTGAATGAGATCTTCTTAATCCATTTCATCACTTTCTGCCAAGAAAAGGGAGTTGATGAGTGGCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR CAA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACTGGTGCTTGGTCATCTaGGTGGTGGTCAGCCACTCA | + |
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Preference number: 5 (lower is better) Translates to: LRHECTLIPVIIFNQWENWCLVI*VVVSHS Trigger: TGAGTGGCTGACCACCACCAAGATGACCAAGCACCA...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR CAA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACCTTCAGAGCCAACTGTaGCGATGCTTTCTGCCCCAT | + |
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Preference number: 5 (lower is better) Translates to: LRHECTLIPVIIFNQWENLQSQL*RCFLPH Trigger: ATGGGGCAGAAAGCATCGCAACAGTTGGCTCTGAAG...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR CAA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACACCAAACAGGAAGGCTaGGTGCTTGGTCATCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: LRHECTLIPVIIFNQWENTKQEG*VLGHLG Trigger: ACCAAGATGACCAAGCACCAAGCCTTCCTGTTTGGT...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR CAA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACTCTCATTCAGAGTATTaGCAGCTGGGCAGAGTTTAC | + |
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Preference number: 5 (lower is better) Translates to: LRHECTLIPVIIFNQWENSHSEY*QLGRVY Trigger: GTAAACTCTGCCCAGCTGCAAATACTCTGAATGAGA...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR CAA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACAAGACTCCTCTACCCTaGATTCTGGATTGGAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: LRHECTLIPVIIFNQWENKTPLP*ILDWKG Trigger: ACCTTTCCAATCCAGAATCAAGGGTAGAGGAGTCTT...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR CAA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACCTGGGCAGAGTTTACTaGGAGGATATTCAAATCCAA | + |
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Preference number: 5 (lower is better) Translates to: LRHECTLIPVIIFNQWENLGRVY*EDIQIQ Trigger: TTGGATTTGAATATCCTCCAAGTAAACTCTGCCCAG...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR CAA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACGAGCTGAAGCTTTATTaGCTTGTTGGATCCCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: LRHECTLIPVIIFNQWENELKLY*LVGSPK Trigger: TTTTGGGGATCCAACAAGCAAATAAAGCTTCAGCTC...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR CAA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACTTTCTGAGCAGCTCTTaGATGAACACACAATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: LRHECTLIPVIIFNQWENFLSSS*MNTQSS Trigger: TGAAGATTGTGTGTTCATCAAAGAGCTGCTCAGAAA...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS-3UTR CAA 90 bp | TTGCGACATGAATGTACTTTGATCCCAGTAATCATTTTCAATCAATGGGAAAACCGACATGAATGTACTTaGATCCCAGTAATCATTTTC | + |
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Preference number: 5 (lower is better) Translates to: LRHECTLIPVIIFNQWENRHECT*IPVIIF Trigger: GAAAATGATTACTGGGATCAAAGTACATTCATGTCG...GTTTTCCCATTGATTGAAAATGATTACTGGGATCAAAGTACATTCATGTCGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS CAA 72 bp | GCTTCACTGACCACCTCACAGACGACGGGCACCTCTTaGCTGTCCTTCAGAGCCAACTGTTGCGATGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: ASLTTSQTTGTS*LSFRANCCDAF Trigger: GAAAGCATCGCAACAGTTGGCTCTGAAGGACAGCAAAGAGGTGCCCGTCGTCTGTGAGGTGGTCAGTGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS CAA 90 bp | TGGACTATAGCTTCACTGACCACCTCACAGACGACGGGCACCTCTTaGCTGTCCTTCAGAGCCAACTGTTGCGATGCTTTCTGCCCCATT | + |
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Preference number: 6 (lower is better) Translates to: WTIASLTTSQTTGTS*LSFRANCCDAFCPI Trigger: AATGGGGCAGAAAGCATCGCAACAGTTGGCTCTGAAGGACAGCAAAGAGGTGCCCGTCGTCTGTGAGGTGGTCAGTGAAGCTATAGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS CAA 90 bp | GGATCCCCAAAAGGTCCAAATCCAGTCTGCACCAAACAGGAAGGCTaGGTGCTTGGTCATCTTGGTGGTGGTCAGCCACTCATCAACTCC | + |
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Preference number: 6 (lower is better) Translates to: GSPKGPNPVCTKQEG*VLGHLGGGQPLINS Trigger: GGAGTTGATGAGTGGCTGACCACCACCAAGATGACCAAGCACCAAGCCTTCCTGTTTGGTGCAGACTGGATTTGGACCTTTTGGGGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS CCA 72 bp | CACCAAACAGGAAGGCTTGGTGCTTGGTCATCTTGGTaGTGGTCAGCCACTCATCAACTCCCTTTTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: HQTGRLGAWSSW*WSATHQLPFLG Trigger: GCCAAGAAAAGGGAGTTGATGAGTGGCTGACCACCACCAAGATGACCAAGCACCAAGCCTTCCTGTTTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS CAA 72 bp | AAAGGTCCAAATCCAGTCTGCACCAAACAGGAAGGCTaGGTGCTTGGTCATCTTGGTGGTGGTCAGCCACTC | + |
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Preference number: 6 (lower is better) Translates to: KGPNPVCTKQEG*VLGHLGGGQPL Trigger: GAGTGGCTGACCACCACCAAGATGACCAAGCACCAAGCCTTCCTGTTTGGTGCAGACTGGATTTGGACCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS TCA 72 bp | GGAAAGGTCACAAGGCTTAGATTCCACAGGAGGAGGTaGAGACATCTGCAGAGTCTGTACTGCGAGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: GKVTRLRFHRRR*RHLQSLYCELK Trigger: CTTCAGCTCGCAGTACAGACTCTGCAGATGTCTTCACCTCCTCCTGTGGAATCTAAGCCTTGTGACCTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS CAA 72 bp | TCTGCACCAAACAGGAAGGCTTGGTGCTTGGTCATCTaGGTGGTGGTCAGCCACTCATCAACTCCCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SAPNRKAWCLVI*VVVSHSSTPFS Trigger: AGAAAAGGGAGTTGATGAGTGGCTGACCACCACCAAGATGACCAAGCACCAAGCCTTCCTGTTTGGTGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS CAA 90 bp | CTCACAGACGACGGGCACCTCTTTGCTGTCCTTCAGAGCCAACTGTaGCGATGCTTTCTGCCCCATTTTCTCTGCATCCAAATATCAAAC | + |
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Preference number: 6 (lower is better) Translates to: LTDDGHLFAVLQSQL*RCFLPHFLCIQISN Trigger: GTTTGATATTTGGATGCAGAGAAAATGGGGCAGAAAGCATCGCAACAGTTGGCTCTGAAGGACAGCAAAGAGGTGCCCGTCGTCTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS CAA 90 bp | CAAATCCAGTCTGCACCAAACAGGAAGGCTTGGTGCTTGGTCATCTaGGTGGTGGTCAGCCACTCATCAACTCCCTTTTCTTGGCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: QIQSAPNRKAWCLVI*VVVSHSSTPFSWQK Trigger: TTTCTGCCAAGAAAAGGGAGTTGATGAGTGGCTGACCACCACCAAGATGACCAAGCACCAAGCCTTCCTGTTTGGTGCAGACTGGATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS TCA 72 bp | GGAGGTGAAGACATCTGCAGAGTCTGTACTGCGAGCTaGAGCTTTATTTGCTTGTTGGATCCCCAAAAGGTC | + |
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Preference number: 6 (lower is better) Translates to: GGEDICRVCTAS*SFICLLDPQKV Trigger: GACCTTTTGGGGATCCAACAAGCAAATAAAGCTTCAGCTCGCAGTACAGACTCTGCAGATGTCTTCACCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS CCA 72 bp | GTCCAGGACAACTCCCCTGATGTCTTTAGGCTTTCCTaGCATACCAAAGATGATAAACAGACCCAGGCAATC | + |
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Preference number: 6 (lower is better) Translates to: VQDNSPDVFRLS*HTKDDKQTQAI Trigger: GATTGCCTGGGTCTGTTTATCATCTTTGGTATGCCAGGAAAGCCTAAAGACATCAGGGGAGTTGTCCTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS CAA 72 bp | TTCTTCCAGGAAGACTCCTCTACCCTTGATTCTGGATaGGAAAGGTCACAAGGCTTAGATTCCACAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: FFQEDSSTLDSG*ERSQGLDSTGG Trigger: TCCTCCTGTGGAATCTAAGCCTTGTGACCTTTCCAATCCAGAATCAAGGGTAGAGGAGTCTTCCTGGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS CAA 90 bp | AATCTACTTTTCTTCCAGGAAGACTCCTCTACCCTTGATTCTGGATaGGAAAGGTCACAAGGCTTAGATTCCACAGGAGGAGGTGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: NLLFFQEDSSTLDSG*ERSQGLDSTGGGED Trigger: GTCTTCACCTCCTCCTGTGGAATCTAAGCCTTGTGACCTTTCCAATCCAGAATCAAGGGTAGAGGAGTCTTCCTGGAAGAAAAGTAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS TCA 72 bp | GCCACTCACATAATACATATCCAAGTCAGAGAATGCTaGTATAAACCTTGCCCACCTCTCTCAGCCCGTCTT | + |
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Preference number: 6 (lower is better) Translates to: ATHIIHIQVREC*YKPCPPLSARL Trigger: AAGACGGGCTGAGAGAGGTGGGCAAGGTTTATATCAGCATTCTCTGACTTGGATATGTATTATGTGAGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS TCA 72 bp | AAATCTACTTTTCTTCCAGGAAGACTCCTCTACCCTTaGTTCTGGATTGGAAAGGTCACAAGGCTTAGATTC | + |
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Preference number: 6 (lower is better) Translates to: KSTFLPGRLLYP*FWIGKVTRLRF Trigger: GAATCTAAGCCTTGTGACCTTTCCAATCCAGAATCAAGGGTAGAGGAGTCTTCCTGGAAGAAAAGTAGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS CCA 72 bp | CTCATTCAGAGTATTTGCAGCTGGGCAGAGTTTACTTaGAGGATATTCAAATCCAAGGTACTCCTTCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: LIQSICSWAEFT*RIFKSKVLLQF Trigger: AAACTGAAGGAGTACCTTGGATTTGAATATCCTCCAAGTAAACTCTGCCCAGCTGCAAATACTCTGAATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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| CDS CAA 72 bp | TCTCATTCAGAGTATTTGCAGCTGGGCAGAGTTTACTaGGAGGATATTCAAATCCAAGGTACTCCTTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: SHSEYLQLGRVY*EDIQIQGTPSV Trigger: AACTGAAGGAGTACCTTGGATTTGAATATCCTCCAAGTAAACTCTGCCCAGCTGCAAATACTCTGAATGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000310791.4 |
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