RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RELT (Homo sapiens)

Ensembl gene IDs: ENSG00000054967

Ensembl transcript IDs: ENST00000064780.7, ENST00000393580.2, ENST00000537771.1, ENST00000539134.1, ENST00000544075.5, ENST00000545687.5, ENST00000545886.1

Found 427 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCACCTGCCTCCTCACTGGGGCAGACGCTCCCACCTCCAGGCCTTaGTCTTTGCTGTCTCGTCTGCTGGGCCATTGCTTCTCGGTCCTC +
Preference number: 1 (lower is better)
Translates to: ATCLLTGADAPTSRP*SLLSRLLGHCFSVL
Trigger: GAGGACCGAGAAGCAATGGCCCAGCAGACGAGACAGCAAAGACCAAGGCCTGGAGGTGGGAGCGTCTGCCCCAGTGAGGAGGCAGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR GCA 90 bp GGGCAGACGCTCCCACCTCCAGGCCTTGGTCTTTGCTGTCTCGTCTaGTGGGCCATTGCTTCTCGGTCCTCACAGTCCCAGCTGCAGCTC +
Preference number: 1 (lower is better)
Translates to: GQTLPPPGLGLCCLV*WAIASRSSQSQLQL
Trigger: GAGCTGCAGCTGGGACTGTGAGGACCGAGAAGCAATGGCCCAGCAGACGAGACAGCAAAGACCAAGGCCTGGAGGTGGGAGCGTCTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR GCA 90 bp GCCTCCTCACTGGGGCAGACGCTCCCACCTCCAGGCCTTGGTCTTTaGTGTCTCGTCTGCTGGGCCATTGCTTCTCGGTCCTCACAGTCC +
Preference number: 1 (lower is better)
Translates to: ASSLGQTLPPPGLGL*CLVCWAIASRSSQS
Trigger: GGACTGTGAGGACCGAGAAGCAATGGCCCAGCAGACGAGACAGCAAAGACCAAGGCCTGGAGGTGGGAGCGTCTGCCCCAGTGAGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR GCA 90 bp GTTGCTGAGCCAGAGTGGAAGTCAGGGCTGGGCCTGGCAGCCGCCTaGACTGCCCAGAAGCACTGGCACCACAGGGACACAGAAACCACT +
Preference number: 1 (lower is better)
Translates to: VAEPEWKSGLGLAAA*TAQKHWHHRDTETT
Trigger: AGTGGTTTCTGTGTCCCTGTGGTGCCAGTGCTTCTGGGCAGTGCAGGCGGCTGCCAGGCCCAGCCCTGACTTCCACTCTGGCTCAGCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR CCA 90 bp CAGACGCTCCCACCTCCAGGCCTTGGTCTTTGCTGTCTCGTCTGCTaGGCCATTGCTTCTCGGTCCTCACAGTCCCAGCTGCAGCTCCAC +
Preference number: 1 (lower is better)
Translates to: QTLPPPGLGLCCLVC*AIASRSSQSQLQLH
Trigger: GTGGAGCTGCAGCTGGGACTGTGAGGACCGAGAAGCAATGGCCCAGCAGACGAGACAGCAAAGACCAAGGCCTGGAGGTGGGAGCGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR TCA 90 bp CCGCTCCTGTGGCTCCTTTCCTCTCCACACTGGCCAAGCAGGAGCTaGATGCTTTGGAGGCTCCCTGGGCATAAGGCCCAGGTGACCACT +
Preference number: 1 (lower is better)
Translates to: PLLWLLSSPHWPSRS*MLWRLPGHKAQVTT
Trigger: AGTGGTCACCTGGGCCTTATGCCCAGGGAGCCTCCAAAGCATTCAGCTCCTGCTTGGCCAGTGTGGAGAGGAAAGGAGCCACAGGAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR GCA 90 bp CCGCACATCTTCCTCACCCCCAATTACCTCCCGGGCTCCACACAGTaGATTTCCTCAGGTGCTGCGCTGACCAGTGTGGTAGCTGCTGGC +
Preference number: 1 (lower is better)
Translates to: PHIFLTPNYLPGSTQ*ISSGAALTSVVAAG
Trigger: GCCAGCAGCTACCACACTGGTCAGCGCAGCACCTGAGGAAATGCACTGTGTGGAGCCCGGGAGGTAATTGGGGGTGAGGAAGATGTGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR CCA 90 bp GTGCTCCAGCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTTaGGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCCG +
Preference number: 1 (lower is better)
Translates to: VLQPHQVFSLKLLRS*GWLGRLGLCITVLP
Trigger: CGGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGCTGGAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR CCA 90 bp TGCGGCCCTTGGGCCGGGTTGGAAGCTTGCCCTAGGAATTTTAGATaGAGACGCTCTGTCTTGCCGGGTGTAGCACCCGCTCCTGTGGCT +
Preference number: 1 (lower is better)
Translates to: CGPWAGLEACPRNFR*RRSVLPGVAPAPVA
Trigger: AGCCACAGGAGCGGGTGCTACACCCGGCAAGACAGAGCGTCTCCATCTAAAATTCCTAGGGCAAGCTTCCAACCCGGCCCAAGGGCCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR CCA 90 bp CAGCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTTGGGGCTaGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCCGGGATCA +
Preference number: 1 (lower is better)
Translates to: QPHQVFSLKLLRSWG*LGRLGLCITVLPGS
Trigger: TGATCCCGGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR CCA 90 bp GGCCCCGTTATCTCCCACCAGCCCACTCACTTGGACACAGGCCTGTaGCTCGTCTGCACCAGCTGTTTGCTGTGGTACTCTTTCAGCAGC +
Preference number: 1 (lower is better)
Translates to: GPVISHQPTHLDTGL*LVCTSCLLWYSFSS
Trigger: GCTGCTGAAAGAGTACCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCCTGTGTCCAAGTGAGTGGGCTGGTGGGAGATAACGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544075.5
3UTR TCA 90 bp CTGCACTGCCCAGAAGCACTGGCACCACAGGGACACAGAAACCACTaGGGCCCAAGGTGTGCTCCAGCCCCACCAAGTCTTCTCCCTAAA +
Preference number: 1 (lower is better)
Translates to: LHCPEALAPQGHRNH*GPRCAPAPPSLLPK
Trigger: TTTAGGGAGAAGACTTGGTGGGGCTGGAGCACACCTTGGGCCTCAGTGGTTTCTGTGTCCCTGTGGTGCCAGTGCTTCTGGGCAGTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR GCA 90 bp CCACTCACTTGGACACAGGCCTGTGGCTCGTCTGCACCAGCTGTTTaGTGTGGTACTCTTTCAGCAGCTCCTCCAGGGCCGCAGCATTCT +
Preference number: 1 (lower is better)
Translates to: PLTWTQACGSSAPAV*CGTLSAAPPGPQHS
Trigger: AGAATGCTGCGGCCCTGGAGGAGCTGCTGAAAGAGTACCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCCTGTGTCCAAGTGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544075.5
3UTR GCA 90 bp ATCTCCCACCAGCCCACTCACTTGGACACAGGCCTGTGGCTCGTCTaGACCAGCTGTTTGCTGTGGTACTCTTTCAGCAGCTCCTCCAGG +
Preference number: 1 (lower is better)
Translates to: ISHQPTHLDTGLWLV*TSCLLWYSFSSSSR
Trigger: CCTGGAGGAGCTGCTGAAAGAGTACCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCCTGTGTCCAAGTGAGTGGGCTGGTGGGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544075.5
3UTR CCA 90 bp CACTTGGACACAGGCCTGTGGCTCGTCTGCACCAGCTGTTTGCTGTaGTACTCTTTCAGCAGCTCCTCCAGGGCCGCAGCATTCTCTTTC +
Preference number: 1 (lower is better)
Translates to: HLDTGLWLVCTSCLL*YSFSSSSRAAAFSF
Trigger: GAAAGAGAATGCTGCGGCCCTGGAGGAGCTGCTGAAAGAGTACCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCCTGTGTCCAAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544075.5
3UTR CCA 90 bp CACTATGTGTTGGTGCTCAGCCTTTGCACATGCTGTCCCTCTCTGTaGAACACATTCCCTGGCCCGCACATCTTCCTCACCCCCAATTAC +
Preference number: 1 (lower is better)
Translates to: HYVLVLSLCTCCPSL*NTFPGPHIFLTPNY
Trigger: GTAATTGGGGGTGAGGAAGATGTGCGGGCCAGGGAATGTGTTCCACAGAGAGGGACAGCATGTGCAAAGGCTGAGCACCAACACATAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR GCA 90 bp CACACAGTGCATTTCCTCAGGTGCTGCGCTGACCAGTGTGGTAGCTaGTGGCCACGTGGCTATGGAGCCCTTGAAATATTTGAGTTCCAA +
Preference number: 1 (lower is better)
Translates to: HTVHFLRCCADQCGS*WPRGYGALEIFEFQ
Trigger: TTGGAACTCAAATATTTCAAGGGCTCCATAGCCACGTGGCCAGCAGCTACCACACTGGTCAGCGCAGCACCTGAGGAAATGCACTGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR CCA 90 bp TCCCCCACAACCCAGCCCAGAACCTACAAAGAGCTGAAGAGGCCCTaGGTACTGAGACGTCTCTCCTTACTTCACAGTCAGAAAAATGGA +
Preference number: 1 (lower is better)
Translates to: SPTTQPRTYKELKRP*VLRRLSLLHSQKNG
Trigger: TCCATTTTTCTGACTGTGAAGTAAGGAGAGACGTCTCAGTACCCAGGGCCTCTTCAGCTCTTTGTAGGTTCTGGGCTGGGTTGTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR CCA 90 bp ACAGTGCATTTCCTCAGGTGCTGCGCTGACCAGTGTGGTAGCTGCTaGCCACGTGGCTATGGAGCCCTTGAAATATTTGAGTTCCAATCA +
Preference number: 1 (lower is better)
Translates to: TVHFLRCCADQCGSC*PRGYGALEIFEFQS
Trigger: TGATTGGAACTCAAATATTTCAAGGGCTCCATAGCCACGTGGCCAGCAGCTACCACACTGGTCAGCGCAGCACCTGAGGAAATGCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR-3UTR GCA 90 bp AGGAACTGTGAGGGGAGGGCAGCCTGTCACGGTGCCCAACACAGGGCAGGGCTGGGCAGCCGCCTGCACTaGCCAGAAGCACTGGCACCA +
Preference number: 2 (lower is better)
Translates to: RNCEGRAACHGAQHRAGLGSRLH*PEALAP
Trigger: TGGTGCCAGTGCTTCTGGGCAGTGCAGGCGGCTGCC...CAGCCCTGCCCTGTGTTGGGCACCGTGACAGGCTGCCCTCCCCTCACAGTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR-3UTR GCA 90 bp GGCCCCATTCAAAGCCATATCCTGGGCCACATGCGGCCCTTGGGCCGGGTTGGATGCTCCTGTACACAGTaGCCGCCGGCCACCTGCCTC +
Preference number: 2 (lower is better)
Translates to: GPIQSHILGHMRPLGRVGCSCTQ*PPATCL
Trigger: GAGGCAGGTGGCCGGCGGGCACTGTGTACAGGAGCA...TCCAACCCGGCCCAAGGGCCGCATGTGGCCCAGGATATGGCTTTGAATGGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR-3UTR CCA 90 bp TCAGGTGCTGCGCTGACCAGTGTGGTAGCTGCTGGCCACGTGGCTATGGAGCCCCACCTGCCTCCTCACTaGGGCAGACGCTCCCACCTC +
Preference number: 2 (lower is better)
Translates to: SGAALTSVVAAGHVAMEPHLPPH*GRRSHL
Trigger: GAGGTGGGAGCGTCTGCCCCAGTGAGGAGGCAGGTG...GGGCTCCATAGCCACGTGGCCAGCAGCTACCACACTGGTCAGCGCAGCACCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR-3UTR GCA 90 bp GTAGCACCCGCTCCTGTGGCTCCTTTCCTCTCCACACTGGCCAAGCAGGAGCTGGGCAGCCTGTCACGGTaGCCAACACAGGGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: VAPAPVAPFLSTLAKQELGSLSR*PTQGRA
Trigger: AGCCCTGCCCTGTGTTGGGCACCGTGACAGGCTGCC...CAGCTCCTGCTTGGCCAGTGTGGAGAGGAAAGGAGCCACAGGAGCGGGTGCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR-3UTR CCA 90 bp TCAGGTGCTGCGCTGACCAGTGTGGTAGCTGCTGGCCACGTGGCTATGGAGCCCCTGAGATCTTGGGGCTaGCTGGGCAGGCTAGGGCTC +
Preference number: 2 (lower is better)
Translates to: SGAALTSVVAAGHVAMEPLRSWG*LGRLGL
Trigger: GAGCCCTAGCCTGCCCAGCCAGCCCCAAGATCTCAG...GGGCTCCATAGCCACGTGGCCAGCAGCTACCACACTGGTCAGCGCAGCACCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR-3UTR CCA 90 bp GCCCAGCCTCTGATGATACAGAGAATCCCGTGGGCTCCTAGGATCCAGCCAGGGCACCTGCCTCCTCACTaGGGCAGACGCTCCCACCTC +
Preference number: 2 (lower is better)
Translates to: AQPLMIQRIPWAPRIQPGHLPPH*GRRSHL
Trigger: GAGGTGGGAGCGTCTGCCCCAGTGAGGAGGCAGGTG...CCCTGGCTGGATCCTAGGAGCCCACGGGATTCTCTGTATCATCAGAGGCTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR GCA 90 bp TCAGGTGCTGCGCTGACCAGTGTGGTAGCTGCTGGCCACGTGGCTATGGAGCCCAGGGGGACGCACATCTaGTCTAGGGCCCTGTACAGA +
Preference number: 2 (lower is better)
Translates to: SGAALTSVVAAGHVAMEPRGTHI*SRALYR
Trigger: TCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCT...GGGCTCCATAGCCACGTGGCCAGCAGCTACCACACTGGTCAGCGCAGCACCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR-3UTR GCA 90 bp CCCAGCAGGGAACAGGGTGACTTGAGGGAGACCCAAGTGGGAGATCCCCAGGAGGGCCTGTGGCTCGTCTaGACCAGCTGTTTGCTGTGG +
Preference number: 2 (lower is better)
Translates to: PSREQGDLRETQVGDPQEGLWLV*TSCLLW
Trigger: CCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCC...CTCCTGGGGATCTCCCACTTGGGTCTCCCTCAAGTCACCCTGTTCCCTGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544075.5
3UTR-3UTR TCA 90 bp GTAGCACCCGCTCCTGTGGCTCCTTTCCTCTCCACACTGGCCAAGCAGGAGCTGGAGAACCAGATGAGTTaGTGGGTCTCCTCTGGGCCC +
Preference number: 2 (lower is better)
Translates to: VAPAPVAPFLSTLAKQELENQMS*WVSSGP
Trigger: GGGCCCAGAGGAGACCCATCAACTCATCTGGTTCTC...CAGCTCCTGCTTGGCCAGTGTGGAGAGGAAAGGAGCCACAGGAGCGGGTGCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR-3UTR GCA 90 bp GTAGCACCCGCTCCTGTGGCTCCTTTCCTCTCCACACTGGCCAAGCAGGAGCTGCGTCTGCTGGGCCATTaGTTCTCGGTCCTCACAGTC +
Preference number: 2 (lower is better)
Translates to: VAPAPVAPFLSTLAKQELRLLGH*FSVLTV
Trigger: GACTGTGAGGACCGAGAAGCAATGGCCCAGCAGACG...CAGCTCCTGCTTGGCCAGTGTGGAGAGGAAAGGAGCCACAGGAGCGGGTGCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR-3UTR CCA 90 bp GGCCCCATTCAAAGCCATATCCTGGGCCACATGCGGCCCTTGGGCCGGGTTGGAACTGCCCAGAAGCACTaGCACCACAGGGACACAGAA +
Preference number: 2 (lower is better)
Translates to: GPIQSHILGHMRPLGRVGTAQKH*HHRDTE
Trigger: TTCTGTGTCCCTGTGGTGCCAGTGCTTCTGGGCAGT...TCCAACCCGGCCCAAGGGCCGCATGTGGCCCAGGATATGGCTTTGAATGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR-3UTR CCA 90 bp AGGAACTGTGAGGGGAGGGCAGCCTGTCACGGTGCCCAACACAGGGCAGGGCTGACACATGGAAGGGGGTaGAGACACAAGGATAGGGCA +
Preference number: 2 (lower is better)
Translates to: RNCEGRAACHGAQHRAGLTHGRG*RHKDRA
Trigger: TGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGT...CAGCCCTGCCCTGTGTTGGGCACCGTGACAGGCTGCCCTCCCCTCACAGTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR-3UTR CCA 90 bp GGCCCCATTCAAAGCCATATCCTGGGCCACATGCGGCCCTTGGGCCGGGTTGGAGTGGAACACATTCCCTaGCCCGCACATCTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: GPIQSHILGHMRPLGRVGVEHIP*PAHLPH
Trigger: GTGAGGAAGATGTGCGGGCCAGGGAATGTGTTCCAC...TCCAACCCGGCCCAAGGGCCGCATGTGGCCCAGGATATGGCTTTGAATGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR-3UTR CCA 90 bp AGCAGGGAACAGGGTGACTTGAGGGAGACCCAAGTGGGAGATCCCCAGGAGGCAACCAGCCCACTCACTTaGACACAGGCCTGTGGCTCG +
Preference number: 2 (lower is better)
Translates to: SREQGDLRETQVGDPQEATSPLT*TQACGS
Trigger: CGAGCCACAGGCCTGTGTCCAAGTGAGTGGGCTGGT...TGCCTCCTGGGGATCTCCCACTTGGGTCTCCCTCAAGTCACCCTGTTCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544075.5
3UTR CAA 90 bp TGTGCTCCAGCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTaGGGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCC +
Preference number: 2 (lower is better)
Translates to: CAPAPPSLLPKAPEI*GLAGQARALYHSPA
Trigger: GGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGCTGGAGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR GCA 90 bp AGGAGGGGGACGCACATCTGCTCTAGGGCCCTGTACAGAGGCAAGGGTGTGGCTCTTTGCTGTCTCGTCTaGTGGGCCATTGCTTCTCGG +
Preference number: 2 (lower is better)
Translates to: RRGTHICSRALYRGKGVALCCLV*WAIASR
Trigger: CCGAGAAGCAATGGCCCAGCAGACGAGACAGCAAAG...AGCCACACCCTTGCCTCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR TCA 90 bp CGGCCCCACATAAATAACCAGGTTGCTGAGCCAGAGTGGAAGTCAGGGCTGGGCGGACACAGAAACCACTaGGGCCCAAGGTGTGCTCCA +
Preference number: 2 (lower is better)
Translates to: RPHINNQVAEPEWKSGLGGHRNH*GPRCAP
Trigger: TGGAGCACACCTTGGGCCTCAGTGGTTTCTGTGTCC...GCCCAGCCCTGACTTCCACTCTGGCTCAGCAACCTGGTTATTTATGTGGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR CCA 90 bp CGGCCCCACATAAATAACCAGGTTGCTGAGCCAGAGTGGAAGTCAGGGCTGGGCGAGCTGAAGAGGCCCTaGGTACTGAGACGTCTCTCC +
Preference number: 2 (lower is better)
Translates to: RPHINNQVAEPEWKSGLGELKRP*VLRRLS
Trigger: GGAGAGACGTCTCAGTACCCAGGGCCTCTTCAGCTC...GCCCAGCCCTGACTTCCACTCTGGCTCAGCAACCTGGTTATTTATGTGGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR CCA 90 bp TCAGGTGCTGCGCTGACCAGTGTGGTAGCTGCTGGCCACGTGGCTATGGAGCCCAACAGGCGGATAAGCTaGGAAGGGCACAGAGAAAAG +
Preference number: 2 (lower is better)
Translates to: SGAALTSVVAAGHVAMEPNRRIS*EGHREK
Trigger: CTTTTCTCTGTGCCCTTCCCAGCTTATCCGCCTGTT...GGGCTCCATAGCCACGTGGCCAGCAGCTACCACACTGGTCAGCGCAGCACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR-3UTR TCA 90 bp CGGCCCCACATAAATAACCAGGTTGCTGAGCCAGAGTGGAAGTCAGGGCTGGGCAGAGGCCCTGGGTACTaGGACGTCTCTCCTTACTTC +
Preference number: 2 (lower is better)
Translates to: RPHINNQVAEPEWKSGLGRGPGY*DVSPYF
Trigger: GAAGTAAGGAGAGACGTCTCAGTACCCAGGGCCTCT...GCCCAGCCCTGACTTCCACTCTGGCTCAGCAACCTGGTTATTTATGTGGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR GCA 90 bp CGGCCCCACATAAATAACCAGGTTGCTGAGCCAGAGTGGAAGTCAGGGCTGGGCCTTTGCTGTCTCGTCTaGTGGGCCATTGCTTCTCGG +
Preference number: 2 (lower is better)
Translates to: RPHINNQVAEPEWKSGLGLCCLV*WAIASR
Trigger: CCGAGAAGCAATGGCCCAGCAGACGAGACAGCAAAG...GCCCAGCCCTGACTTCCACTCTGGCTCAGCAACCTGGTTATTTATGTGGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR GCA 90 bp TATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGAGTTTCTGCCCGCCGGCCACCTaGCTCCTCACTGGGGCAGAC +
Preference number: 2 (lower is better)
Translates to: YSTHGRGWRHKDRAMVSFCPPAT*LLTGAD
Trigger: GTCTGCCCCAGTGAGGAGGCAGGTGGCCGGCGGGCA...GAAACTCACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR CCA 90 bp AGGAACTGTGAGGGGAGGGCAGCCTGTCACGGTGCCCAACACAGGGCAGGGCTGCAGCAAAAACGGGGCTaGATAAAGCTACTAATGGGA +
Preference number: 2 (lower is better)
Translates to: RNCEGRAACHGAQHRAGLQQKRG*IKLLMG
Trigger: TCCCATTAGTAGCTTTATCCAGCCCCGTTTTTGCTG...CAGCCCTGCCCTGTGTTGGGCACCGTGACAGGCTGCCCTCCCCTCACAGTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR-3UTR CCA 90 bp GCAGAGGCCCTGGAAGCAGCAAAAACGGGGCTGGATAAAGCTACTAATGGGAGGTGCTGTCTCGTCTGCTaGGCCATTGCTTCTCGGTCC +
Preference number: 2 (lower is better)
Translates to: AEALEAAKTGLDKATNGRCCLVC*AIASRS
Trigger: GGACCGAGAAGCAATGGCCCAGCAGACGAGACAGCA...CCTCCCATTAGTAGCTTTATCCAGCCCCGTTTTTGCTGCTTCCAGGGCCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR CCA 90 bp GGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCCGGGATCAAGTCTACAGAGGCAAGGGTGTaGCTAATTACCAAGGAATGG +
Preference number: 2 (lower is better)
Translates to: GLAGQARALYHSPAGIKSTEARV*LITKEW
Trigger: CCATTCCTTGGTAATTAGCCACACCCTTGCCTCTGT...AGACTTGATCCCGGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR GCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGTGCCCGCCGGCCACCTaGCTCCTCACTGGGGCAGAC +
Preference number: 2 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVCPPAT*LLTGAD
Trigger: GTCTGCCCCAGTGAGGAGGCAGGTGGCCGGCGGGCA...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR GCA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTTGCTCCTGTACACAGTaGCCGCCGGCCACCTGCCTC +
Preference number: 2 (lower is better)
Translates to: YFTVRKMDPAMATDVPKICSCTQ*PPATCL
Trigger: GAGGCAGGTGGCCGGCGGGCACTGTGTACAGGAGCA...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR GCA 90 bp AGGGCACAGAGAAAAGGAGCTCCTCGTGACAGCACTTTCCCACCTTTTATTATTGGGCGGGGCTCAGCCTaGTCCTGTACACAGTGCCCG +
Preference number: 2 (lower is better)
Translates to: RAQRKGAPRDSTFPPFIIGRGSA*SCTQCP
Trigger: CGGGCACTGTGTACAGGAGCAGGCTGAGCCCCGCCC...AATAATAAAAGGTGGGAAAGTGCTGTCACGAGGAGCTCCTTTTCTCTGTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR-3UTR GCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGCGTCTGCTGGGCCATTaGTTCTCGGTCCTCACAGTC +
Preference number: 2 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRRLLGH*FSVLTV
Trigger: GACTGTGAGGACCGAGAAGCAATGGCCCAGCAGACG...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR GCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGGGGCGGGGCTCAGCCTaGTCCTGTACACAGTGCCCG +
Preference number: 2 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVGRGSA*SCTQCP
Trigger: CGGGCACTGTGTACAGGAGCAGGCTGAGCCCCGCCC...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR GCA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTAGGGGGACGCACATCTaGTCTAGGGCCCTGTACAGA +
Preference number: 2 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFRGTHI*SRALYR
Trigger: TCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCT...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR CCA 90 bp GCAGAGGCCCTGGAAGCAGCAAAAACGGGGCTGGATAAAGCTACTAATGGGAGGATACAGAGAATCCCGTaGGCTCCTAGGATCCAGCCA +
Preference number: 2 (lower is better)
Translates to: AEALEAAKTGLDKATNGRIQRIP*APRIQP
Trigger: TGGCTGGATCCTAGGAGCCCACGGGATTCTCTGTAT...CCTCCCATTAGTAGCTTTATCCAGCCCCGTTTTTGCTGCTTCCAGGGCCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR CCA 90 bp TATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGAGTTTCCTGAGATCTTGGGGCTaGCTGGGCAGGCTAGGGCTC +
Preference number: 2 (lower is better)
Translates to: YSTHGRGWRHKDRAMVSFLRSWG*LGRLGL
Trigger: GAGCCCTAGCCTGCCCAGCCAGCCCCAAGATCTCAG...GAAACTCACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR GCA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTCCAGGCCTTGGTCTTTaGTGTCTCGTCTGCTGGGCC +
Preference number: 2 (lower is better)
Translates to: YFTVRKMDPAMATDVPKIPGLGL*CLVCWA
Trigger: GGCCCAGCAGACGAGACAGCAAAGACCAAGGCCTGG...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR GCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGCAGGCCCCTCCCCTCTaGCAAGCCCAGCCTCTGATG +
Preference number: 2 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVQAPPL*QAQPLM
Trigger: CATCAGAGGCTGGGCTTGGCAGAGGGGAGGGGCCTG...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR TCA 90 bp GTAGCACCCGCTCCTGTGGCTCCTTTCCTCTCCACACTGGCCAAGCAGGAGCTGAGGATAGGGCAATGGTaGGTTTCAATAAATAAGAGA +
Preference number: 2 (lower is better)
Translates to: VAPAPVAPFLSTLAKQELRIGQW*VSINKR
Trigger: TCTCTTATTTATTGAAACTCACCATTGCCCTATCCT...CAGCTCCTGCTTGGCCAGTGTGGAGAGGAAAGGAGCCACAGGAGCGGGTGCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR-3UTR CCA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTTGCTGTCTCGTCTGCTaGGCCATTGCTTCTCGGTCC +
Preference number: 2 (lower is better)
Translates to: YFTVRKMDPAMATDVPKICCLVC*AIASRS
Trigger: GGACCGAGAAGCAATGGCCCAGCAGACGAGACAGCA...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR CCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGAGGCAGAGCCATGGATaGACAGCCCCATGGGGGCCT +
Preference number: 2 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVRQSHG*TAPWGP
Trigger: AGGCCCCCATGGGGCTGTCCATCCATGGCTCTGCCT...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR TCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGGGACACAGAAACCACTaGGGCCCAAGGTGTGCTCCA +
Preference number: 2 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVGHRNH*GPRCAP
Trigger: TGGAGCACACCTTGGGCCTCAGTGGTTTCTGTGTCC...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR CCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGACAGAGGCAAGGGTGTaGCTAATTACCAAGGAATGG +
Preference number: 2 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRTEARV*LITKEW
Trigger: CCATTCCTTGGTAATTAGCCACACCCTTGCCTCTGT...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR CCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGACTGCCCAGAAGCACTaGCACCACAGGGACACAGAA +
Preference number: 2 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVTAQKH*HHRDTE
Trigger: TTCTGTGTCCCTGTGGTGCCAGTGCTTCTGGGCAGT...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR CCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGAAATGGACCCAGCGATaGCCACAGATGTGCCCAAGA +
Preference number: 2 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVKWTQR*PQMCPR
Trigger: TCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTT...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR GCA 90 bp TATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGAGTTTCTCTGTATCACAGTCCTaGCGGGATCAAGTCTATTTT +
Preference number: 2 (lower is better)
Translates to: YSTHGRGWRHKDRAMVSFSVSQS*RDQVYF
Trigger: AAAATAGACTTGATCCCGGCAGGACTGTGATACAGA...GAAACTCACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR GCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGTCTGTATCACAGTCCTaGCGGGATCAAGTCTATTTT +
Preference number: 2 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVSVSQS*RDQVYF
Trigger: AAAATAGACTTGATCCCGGCAGGACTGTGATACAGA...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR CAA 90 bp AGGAACTGTGAGGGGAGGGCAGCCTGTCACGGTGCCCAACACAGGGCAGGGCTGTCGTCTGCTGGGCCATaGCTTCTCGGTCCTCACAGT +
Preference number: 3 (lower is better)
Translates to: RNCEGRAACHGAQHRAGLSSAGP*LLGPHS
Trigger: ACTGTGAGGACCGAGAAGCAATGGCCCAGCAGACGA...CAGCCCTGCCCTGTGTTGGGCACCGTGACAGGCTGCCCTCCCCTCACAGTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR-3UTR CAA 90 bp GGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCCGGGATCAAGTCTTCGTCTGCTGGGCCATaGCTTCTCGGTCCTCACAGT +
Preference number: 3 (lower is better)
Translates to: GLAGQARALYHSPAGIKSSSAGP*LLGPHS
Trigger: ACTGTGAGGACCGAGAAGCAATGGCCCAGCAGACGA...AGACTTGATCCCGGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR CAA 90 bp GCCCAGCCTCTGATGATACAGAGAATCCCGTGGGCTCCTAGGATCCAGCCAGGGTCCAGGCCTTGGTCTTaGCTGTCTCGTCTGCTGGGC +
Preference number: 3 (lower is better)
Translates to: AQPLMIQRIPWAPRIQPGSRPWS*LSRLLG
Trigger: GCCCAGCAGACGAGACAGCAAAGACCAAGGCCTGGA...CCCTGGCTGGATCCTAGGAGCCCACGGGATTCTCTGTATCATCAGAGGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR GCA 72 bp TGGACACAGGCCTGTGGCTCGTCTGCACCAGCTGTTTaGTGTGGTACTCTTTCAGCAGCTCCTCCAGGGCCG +
Preference number: 3 (lower is better)
Translates to: WTQACGSSAPAV*CGTLSAAPPGP
Trigger: CGGCCCTGGAGGAGCTGCTGAAAGAGTACCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCCTGTGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544075.5
3UTR TCA 72 bp TGGCTCCTTTCCTCTCCACACTGGCCAAGCAGGAGCTaGATGCTTTGGAGGCTCCCTGGGCATAAGGCCCAG +
Preference number: 3 (lower is better)
Translates to: WLLSSPHWPSRS*MLWRLPGHKAQ
Trigger: CTGGGCCTTATGCCCAGGGAGCCTCCAAAGCATTCAGCTCCTGCTTGGCCAGTGTGGAGAGGAAAGGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR CCA 72 bp GGTGCCCAACACAGGGCAGGGCTGGACAGGTACAAGTaGAACAGGCGGATAAGCTGGGAAGGGCACAGAGAA +
Preference number: 3 (lower is better)
Translates to: GAQHRAGLDRYK*NRRISWEGHRE
Trigger: TTCTCTGTGCCCTTCCCAGCTTATCCGCCTGTTCCACTTGTACCTGTCCAGCCCTGCCCTGTGTTGGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR-3UTR CAA 90 bp AGCAGGGAACAGGGTGACTTGAGGGAGACCCAAGTGGGAGATCCCCAGGAGGCAGTCTGCACCAGCTGTTaGCTGTGGTACTCTTTCAGC +
Preference number: 3 (lower is better)
Translates to: SREQGDLRETQVGDPQEAVCTSC*LWYSFS
Trigger: GCTGAAAGAGTACCACAGCAAACAGCTGGTGCAGAC...TGCCTCCTGGGGATCTCCCACTTGGGTCTCCCTCAAGTCACCCTGTTCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544075.5
3UTR GCA 72 bp TTCCTCACCCCCAATTACCTCCCGGGCTCCACACAGTaGATTTCCTCAGGTGCTGCGCTGACCAGTGTGGTA +
Preference number: 3 (lower is better)
Translates to: FLTPNYLPGSTQ*ISSGAALTSVV
Trigger: TACCACACTGGTCAGCGCAGCACCTGAGGAAATGCACTGTGTGGAGCCCGGGAGGTAATTGGGGGTGAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR GCA 72 bp TGGGCCACATGCGGCCCTTGGGCCGGGTTGGAAGCTTaGCCTAGGAATTTTAGATGGAGACGCTCTGTCTTG +
Preference number: 3 (lower is better)
Translates to: WATCGPWAGLEA*PRNFRWRRSVL
Trigger: CAAGACAGAGCGTCTCCATCTAAAATTCCTAGGGCAAGCTTCCAACCCGGCCCAAGGGCCGCATGTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR CCA 72 bp CCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTTaGGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACA +
Preference number: 3 (lower is better)
Translates to: PHQVFSLKLLRS*GWLGRLGLCIT
Trigger: TGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR CCA 72 bp ATCTCCCACCAGCCCACTCACTTGGACACAGGCCTGTaGCTCGTCTGCACCAGCTGTTTGCTGTGGTACTCT +
Preference number: 3 (lower is better)
Translates to: ISHQPTHLDTGL*LVCTSCLLWYS
Trigger: AGAGTACCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCCTGTGTCCAAGTGAGTGGGCTGGTGGGAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544075.5
3UTR GCA 72 bp GGTGACCACTATGTGTTGGTGCTCAGCCTTTGCACATaGTGTCCCTCTCTGTGGAACACATTCCCTGGCCCG +
Preference number: 3 (lower is better)
Translates to: GDHYVLVLSLCT*CPSLWNTFPGP
Trigger: CGGGCCAGGGAATGTGTTCCACAGAGAGGGACAGCATGTGCAAAGGCTGAGCACCAACACATAGTGGTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR CCA 72 bp CAAGTCTTCTCCCTAAAGCTCCTGAGATCTTGGGGCTaGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTG +
Preference number: 3 (lower is better)
Translates to: QVFSLKLLRSWG*LGRLGLCITVL
Trigger: CAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR TCA 72 bp GAATGCTTTGGAGGCTCCCTGGGCATAAGGCCCAGGTaGCCACTATGTGTTGGTGCTCAGCCTTTGCACATG +
Preference number: 3 (lower is better)
Translates to: ECFGGSLGIRPR*PLCVGAQPLHM
Trigger: CATGTGCAAAGGCTGAGCACCAACACATAGTGGTCACCTGGGCCTTATGCCCAGGGAGCCTCCAAAGCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
3UTR CCA 72 bp ACCCAGCCCAGAACCTACAAAGAGCTGAAGAGGCCCTaGGTACTGAGACGTCTCTCCTTACTTCACAGTCAG +
Preference number: 3 (lower is better)
Translates to: TQPRTYKELKRP*VLRRLSLLHSQ
Trigger: CTGACTGTGAAGTAAGGAGAGACGTCTCAGTACCCAGGGCCTCTTCAGCTCTTTGTAGGTTCTGGGCTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR CAA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGAGCCCCATGGGGGCCTaGAAGGCAGAGGCCCTGGAA +
Preference number: 3 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVSPMGA*KAEALE
Trigger: TTCCAGGGCCTCTGCCTTCAAGGCCCCCATGGGGCT...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR-3UTR CAA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGTCCAGGCCTTGGTCTTaGCTGTCTCGTCTGCTGGGC +
Preference number: 3 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVSRPWS*LSRLLG
Trigger: GCCCAGCAGACGAGACAGCAAAGACCAAGGCCTGGA...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
3UTR TCA 72 bp ATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTaGGTTTCAATAAATAAGAGAAACAGGATGGACAGG +
Preference number: 3 (lower is better)
Translates to: MEGGGDTRIGQW*VSINKRNRMDR
Trigger: CCTGTCCATCCTGTTTCTCTTATTTATTGAAACTCACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp AGGAACTGTGAGGGGAGGGCAGCCTGTCACGGTGCCCAACACAGGGCAGGGCTGTCCTCAGGCCCCTGGTaGTCGCCGGCCTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: RNCEGRAACHGAQHRAGLSSGPW*SPAWLR
Trigger: GCGCAGCCAGGCCGGCGACCACCAGGGGCCTGAGGA...CAGCCCTGCCCTGTGTTGGGCACCGTGACAGGCTGCCCTCCCCTCACAGTTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp GGGCGCTGGCGGCAGCCTGCAGGGGGCACAGGCAGAAGTGGCCATAGGCCAGGCGGCCTGTGGCTCGTCTaGACCAGCTGTTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GRWRQPAGGTGRSGHRPGGLWLV*TSCLLW
Trigger: CCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCC...GCCTGGCCTATGGCCACTTCTGCCTGTGCCCCCTGCAGGCTGCCGCCAGCGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR GCA 90 bp TCAGGTGCTGCGCTGACCAGTGTGGTAGCTGCTGGCCACGTGGCTATGGAGCCCGCTGCTGGCCCCTGCTaGCACCTCCACGCCACGTCG +
Preference number: 4 (lower is better)
Translates to: SGAALTSVVAAGHVAMEPAAGPC*HLHATS
Trigger: CGACGTGGCGTGGAGGTGGCAGCAGGGGCCAGCAGC...GGGCTCCATAGCCACGTGGCCAGCAGCTACCACACTGGTCAGCGCAGCACCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp GTAGCACCCGCTCCTGTGGCTCCTTTCCTCTCCACACTGGCCAAGCAGGAGCTGGGCCACCTGCCCGGGTaGCGTTCCCAGGCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: VAPAPVAPFLSTLAKQELGHLPG*RSQAAV
Trigger: CACGGCAGCCTGGGAACGGCACCCGGGCAGGTGGCC...CAGCTCCTGCTTGGCCAGTGTGGAGAGGAAAGGAGCCACAGGAGCGGGTGCTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp GGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCCGGGATCAAGTCTCGCGGCCGGAGGACCTaGAGGTCACGGGGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: GLAGQARALYHSPAGIKSRGRRT*RSRGSE
Trigger: CTCCGAGCCCCGTGACCTGCAGGTCCTCCGGCCGCG...AGACTTGATCCCGGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393580.2
CDS-3UTR CCA 90 bp AGGAACTGTGAGGGGAGGGCAGCCTGTCACGGTGCCCAACACAGGGCAGGGCTGGCGCTGGCGGCAGCTTaGACACAGGCCTGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: RNCEGRAACHGAQHRAGLALAAA*TQACGS
Trigger: CGAGCCACAGGCCTGTGTCCAAGCTGCCGCCAGCGC...CAGCCCTGCCCTGTGTTGGGCACCGTGACAGGCTGCCCTCCCCTCACAGTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp GGGCGCTGGCGGCAGCCTGCAGGGGGCACAGGCAGAAGTGGCCATAGGCCAGGCTCCCCAGGTGGGCACTaGCAAAGGGTTGTTGATGTC +
Preference number: 4 (lower is better)
Translates to: GRWRQPAGGTGRSGHRPGSPGGH*QRVVDV
Trigger: GACATCAACAACCCTTTGGCAGTGCCCACCTGGGGA...GCCTGGCCTATGGCCACTTCTGCCTGTGCCCCCTGCAGGCTGCCGCCAGCGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR GCA 90 bp AGGAACTGTGAGGGGAGGGCAGCCTGTCACGGTGCCCAACACAGGGCAGGGCTGTGCTCCTGTACACAGTaGCCGCCGGCCACCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RNCEGRAACHGAQHRAGLCSCTQ*PPATCL
Trigger: GAGGCAGGTGGCCGGCGGGCACTGTGTACAGGAGCA...CAGCCCTGCCCTGTGTTGGGCACCGTGACAGGCTGCCCTCCCCTCACAGTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp AGGAGGGGGACGCACATCTGCTCTAGGGCCCTGTACAGAGGCAAGGGTGTGGCTCCTGACGCCCTGCCTTaGCCCCGGCCTTGGGAACCC +
Preference number: 4 (lower is better)
Translates to: RRGTHICSRALYRGKGVAPDALP*PRPWEP
Trigger: GGGTTCCCAAGGCCGGGGCCAAGGCAGGGCGTCAGG...AGCCACACCCTTGCCTCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp GGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCCGGGATCAAGTCTATGGTGATCTCGCCCTaGCGCCCTGCCTTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GLAGQARALYHSPAGIKSMVISP*RPALAP
Trigger: CGGGGCCAAGGCAGGGCGTCAGGGCGAGATCACCAT...AGACTTGATCCCGGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp AGGAACTGTGAGGGGAGGGCAGCCTGTCACGGTGCCCAACACAGGGCAGGGCTGGAGGTGCAGGAACTGTaGGGGGAGGGCAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: RNCEGRAACHGAQHRAGLEVQEL*GEGSLS
Trigger: TGACAGGCTGCCCTCCCCTCACAGTTCCTGCACCTC...CAGCCCTGCCCTGTGTTGGGCACCGTGACAGGCTGCCCTCCCCTCACAGTTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp AGGAGGGGGACGCACATCTGCTCTAGGGCCCTGTACAGAGGCAAGGGTGTGGCTCACGTTCGGGGGCGCTaGCGGCAGCTTGGACACAGG +
Preference number: 4 (lower is better)
Translates to: RRGTHICSRALYRGKGVAHVRGR*RQLGHR
Trigger: CCTGTGTCCAAGCTGCCGCCAGCGCCCCCGAACGTG...AGCCACACCCTTGCCTCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp GTAGCACCCGCTCCTGTGGCTCCTTTCCTCTCCACACTGGCCAAGCAGGAGCTGAGGCCCTGCACGGTGTaGAGATGGTGGCGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: VAPAPVAPFLSTLAKQELRPCTV*RWWRCG
Trigger: CCCGCACCGCCACCATCTCCACACCGTGCAGGGCCT...CAGCTCCTGCTTGGCCAGTGTGGAGAGGAAAGGAGCCACAGGAGCGGGTGCTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp GGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCCGGGATCAAGTCTGCCTCCTCCAAAGGCTaGAACGGGCATGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: GLAGQARALYHSPAGIKSASSKG*NGHGAG
Trigger: GCCAGCCCCATGCCCGTTGCAGCCTTTGGAGGAGGC...AGACTTGATCCCGGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp AGGAGGGGGACGCACATCTGCTCTAGGGCCCTGTACAGAGGCAAGGGTGTGGCTGCCTCCTCCAAAGGCTaGAACGGGCATGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RRGTHICSRALYRGKGVAASSKG*NGHGAG
Trigger: GCCAGCCCCATGCCCGTTGCAGCCTTTGGAGGAGGC...AGCCACACCCTTGCCTCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp AGGAACTGTGAGGGGAGGGCAGCCTGTCACGGTGCCCAACACAGGGCAGGGCTGGGCCTGTGGCTCGTCTaGACCAGCTGTTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RNCEGRAACHGAQHRAGLGLWLV*TSCLLW
Trigger: CCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCC...CAGCCCTGCCCTGTGTTGGGCACCGTGACAGGCTGCCCTCCCCTCACAGTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp CGGCCCCACATAAATAACCAGGTTGCTGAGCCAGAGTGGAAGTCAGGGCTGGGCTGCCCGCCGGCCACCTaGCTCCTCACTGGGGCAGAC +
Preference number: 4 (lower is better)
Translates to: RPHINNQVAEPEWKSGLGCPPAT*LLTGAD
Trigger: GTCTGCCCCAGTGAGGAGGCAGGTGGCCGGCGGGCA...GCCCAGCCCTGACTTCCACTCTGGCTCAGCAACCTGGTTATTTATGTGGGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp AGGAGGGGGACGCACATCTGCTCTAGGGCCCTGTACAGAGGCAAGGGTGTGGCTGGCAGCCTGTCACGGTaGCCAACACAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RRGTHICSRALYRGKGVAGSLSR*PTQGRA
Trigger: AGCCCTGCCCTGTGTTGGGCACCGTGACAGGCTGCC...AGCCACACCCTTGCCTCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp AGGAGGGGGACGCACATCTGCTCTAGGGCCCTGTACAGAGGCAAGGGTGTGGCTGCGATGACCGCGTACTaGGCGGCTGTCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RRGTHICSRALYRGKGVAAMTAY*AAVSSG
Trigger: CCCAGAGGAGACAGCCGCCCAGTACGCGGTCATCGC...AGCCACACCCTTGCCTCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp GGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCCGGGATCAAGTCTCACCTGCCTCCTCACTaGGGCAGACGCTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: GLAGQARALYHSPAGIKSHLPPH*GRRSHL
Trigger: GAGGTGGGAGCGTCTGCCCCAGTGAGGAGGCAGGTG...AGACTTGATCCCGGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp AGGAGGGGGACGCACATCTGCTCTAGGGCCCTGTACAGAGGCAAGGGTGTGGCTAGGATGGACAGGCAGTaGGCCCATGCCTGCACGGCC +
Preference number: 4 (lower is better)
Translates to: RRGTHICSRALYRGKGVARMDRQ*AHACTA
Trigger: GGCCGTGCAGGCATGGGCCCACTGCCTGTCCATCCT...AGCCACACCCTTGCCTCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp AGGAGGGGGACGCACATCTGCTCTAGGGCCCTGTACAGAGGCAAGGGTGTGGCTTCATCCTCAGGCCCCTaGTGGTCGCCGGCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: RRGTHICSRALYRGKGVASSSGP*WSPAWS
Trigger: AGACCAGGCCGGCGACCACCAGGGGCCTGAGGATGA...AGCCACACCCTTGCCTCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393580.2
CDS-3UTR TCA 90 bp CGGCCCCACATAAATAACCAGGTTGCTGAGCCAGAGTGGAAGTCAGGGCTGGGCCAGGGACGATGGCGATaGCCGCGTACTGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: RPHINNQVAEPEWKSGLGQGRWR*PRTGRL
Trigger: CAGCCGCCCAGTACGCGGTCATCGCCATCGTCCCTG...GCCCAGCCCTGACTTCCACTCTGGCTCAGCAACCTGGTTATTTATGTGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp AGGAACTGTGAGGGGAGGGCAGCCTGTCACGGTGCCCAACACAGGGCAGGGCTGGGACACAGAAACCACTaGGGCCCAAGGTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RNCEGRAACHGAQHRAGLGHRNH*GPRCAP
Trigger: TGGAGCACACCTTGGGCCTCAGTGGTTTCTGTGTCC...CAGCCCTGCCCTGTGTTGGGCACCGTGACAGGCTGCCCTCCCCTCACAGTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp GGCCCCATTCAAAGCCATATCCTGGGCCACATGCGGCCCTTGGGCCGGGTTGGAAGGGCCTGCATAATGTaGCCTGCCCTGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GPIQSHILGHMRPLGRVGRACIM*PALGPG
Trigger: ACCTGGACCCAGGGCAGGGCACATTATGCAGGCCCT...TCCAACCCGGCCCAAGGGCCGCATGTGGCCCAGGATATGGCTTTGAATGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp AGCAGGGAACAGGGTGACTTGAGGGAGACCCAAGTGGGAGATCCCCAGGAGGCAGCCTCCTCCAAAGGCTaGAACGGGCATGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SREQGDLRETQVGDPQEAASSKG*NGHGAG
Trigger: GCCAGCCCCATGCCCGTTGCAGCCTTTGGAGGAGGC...TGCCTCCTGGGGATCTCCCACTTGGGTCTCCCTCAAGTCACCCTGTTCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR GCA 90 bp GGCCCCATTCAAAGCCATATCCTGGGCCACATGCGGCCCTTGGGCCGGGTTGGATATCTCGAGTTGCCATaGCCACCTGGGCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GPIQSHILGHMRPLGRVGYLELP*PPGPPA
Trigger: GGCTGGAGGCCCAGGTGGGCATGGCAACTCGAGATA...TCCAACCCGGCCCAAGGGCCGCATGTGGCCCAGGATATGGCTTTGAATGGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp AGGAACTGTGAGGGGAGGGCAGCCTGTCACGGTGCCCAACACAGGGCAGGGCTGGAGTGTATCTCGAGTTaGCATGCCCACCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: RNCEGRAACHGAQHRAGLECISS*HAHLGL
Trigger: GAGGCCCAGGTGGGCATGGCAACTCGAGATACACTC...CAGCCCTGCCCTGTGTTGGGCACCGTGACAGGCTGCCCTCCCCTCACAGTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp GACTTTCTGCTACCCCTTCCCTTTATAGACCTGCTGGAAGAGGAGGGGGACGCAGGCCACCTGCCCGGGTaGCGTTCCCAGGCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: DFLLPLPFIDLLEEEGDAGHLPG*RSQAAV
Trigger: CACGGCAGCCTGGGAACGGCACCCGGGCAGGTGGCC...TGCGTCCCCCTCCTCTTCCAGCAGGTCTATAAAGGGAAGGGGTAGCAGAAAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp AGGAGGGGGACGCACATCTGCTCTAGGGCCCTGTACAGAGGCAAGGGTGTGGCTTGGAGATGGTGGCGGTaGGGGCAGATGTGTGGCACG +
Preference number: 4 (lower is better)
Translates to: RRGTHICSRALYRGKGVAWRWWR*GQMCGT
Trigger: CGTGCCACACATCTGCCCGCACCGCCACCATCTCCA...AGCCACACCCTTGCCTCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp CGGCCCCACATAAATAACCAGGTTGCTGAGCCAGAGTGGAAGTCAGGGCTGGGCGGGCGGGGCTCAGCCTaGTCCTGTACACAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: RPHINNQVAEPEWKSGLGGRGSA*SCTQCP
Trigger: CGGGCACTGTGTACAGGAGCAGGCTGAGCCCCGCCC...GCCCAGCCCTGACTTCCACTCTGGCTCAGCAACCTGGTTATTTATGTGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp GACTTTCTGCTACCCCTTCCCTTTATAGACCTGCTGGAAGAGGAGGGGGACGCAACTGGCGGTGGCCGGTaGGCGGAAGGCGCCGGGACA +
Preference number: 4 (lower is better)
Translates to: DFLLPLPFIDLLEEEGDATGGGR*AEGAGT
Trigger: TGTCCCGGCGCCTTCCGCGCACCGGCCACCGCCAGT...TGCGTCCCCCTCCTCTTCCAGCAGGTCTATAAAGGGAAGGGGTAGCAGAAAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393580.2
CDS-3UTR CCA 90 bp AGGAACTGTGAGGGGAGGGCAGCCTGTCACGGTGCCCAACACAGGGCAGGGCTGTTGGACACAGGCCTGTaGCTCGTCTGCACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RNCEGRAACHGAQHRAGLLDTGL*LVCTSC
Trigger: ACAGCTGGTGCAGACGAGCCACAGGCCTGTGTCCAA...CAGCCCTGCCCTGTGTTGGGCACCGTGACAGGCTGCCCTCCCCTCACAGTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp GGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCCGGGATCAAGTCTTGCACGGTGTGGAGATaGTGGCGGTGCGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: GLAGQARALYHSPAGIKSCTVWR*WRCGQM
Trigger: CATCTGCCCGCACCGCCACCATCTCCACACCGTGCA...AGACTTGATCCCGGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp GGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCCGGGATCAAGTCTCTGAGATCTTGGGGCTaGCTGGGCAGGCTAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GLAGQARALYHSPAGIKSLRSWG*LGRLGL
Trigger: GAGCCCTAGCCTGCCCAGCCAGCCCCAAGATCTCAG...AGACTTGATCCCGGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp AGGAGGGGGACGCACATCTGCTCTAGGGCCCTGTACAGAGGCAAGGGTGTGGCTCTGAGATCTTGGGGCTaGCTGGGCAGGCTAGGGCTC +
Preference number: 4 (lower is better)
Translates to: RRGTHICSRALYRGKGVALRSWG*LGRLGL
Trigger: GAGCCCTAGCCTGCCCAGCCAGCCCCAAGATCTCAG...AGCCACACCCTTGCCTCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp AGGTGTGCTCCAGCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTTGGGGCAGGGACGATGGCGATaGCCGCGTACTGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: RCAPAPPSLLPKAPEILGQGRWR*PRTGRL
Trigger: CAGCCGCCCAGTACGCGGTCATCGCCATCGTCCCTG...CCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGCTGGAGCACACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp GGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCCGGGATCAAGTCTTGCCCAACAGCCCCATaGGGCAGAAGACAGGGACGA +
Preference number: 4 (lower is better)
Translates to: GLAGQARALYHSPAGIKSCPTAP*GRRQGR
Trigger: TCGTCCCTGTCTTCTGCCTCATGGGGCTGTTGGGCA...AGACTTGATCCCGGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp GGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCCGGGATCAAGTCTCCACAGACAAGATGGTaGTCTCGCCCTGACGCCCTG +
Preference number: 4 (lower is better)
Translates to: GLAGQARALYHSPAGIKSPQTRW*SRPDAL
Trigger: CAGGGCGTCAGGGCGAGATCACCATCTTGTCTGTGG...AGACTTGATCCCGGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp AGGTGTGCTCCAGCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTTGGGGGCCCCATGGGGGCCTTaGAGGCAGAGGCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: RCAPAPPSLLPKAPEILGAPWGP*RQRPWK
Trigger: CTTCCAGGGCCTCTGCCTTCAAGGCCCCCATGGGGC...CCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGCTGGAGCACACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp GCAGAGGCCCTGGAAGCAGCAAAAACGGGGCTGGATAAAGCTACTAATGGGAGGGCTGCTGGCCCCTGCTaGCACCTCCACGCCACGTCG +
Preference number: 4 (lower is better)
Translates to: AEALEAAKTGLDKATNGRAAGPC*HLHATS
Trigger: CGACGTGGCGTGGAGGTGGCAGCAGGGGCCAGCAGC...CCTCCCATTAGTAGCTTTATCCAGCCCCGTTTTTGCTGCTTCCAGGGCCTCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp GACTTTCTGCTACCCCTTCCCTTTATAGACCTGCTGGAAGAGGAGGGGGACGCAACCGCTGCTGGCCCCTaGTGCCACCTCCACGCCACG +
Preference number: 4 (lower is better)
Translates to: DFLLPLPFIDLLEEEGDATAAGP*CHLHAT
Trigger: CGTGGCGTGGAGGTGGCAGCAGGGGCCAGCAGCGGT...TGCGTCCCCCTCCTCTTCCAGCAGGTCTATAAAGGGAAGGGGTAGCAGAAAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp TCAGGTGCTGCGCTGACCAGTGTGGTAGCTGCTGGCCACGTGGCTATGGAGCCCCTCGGCCTTGTTCTCTaGTGGGGGCTTCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: SGAALTSVVAAGHVAMEPLGLVL*WGLQPL
Trigger: AAGTGGCTGAAGCCCCCAGCAGAGAACAAGGCCGAG...GGGCTCCATAGCCACGTGGCCAGCAGCTACCACACTGGTCAGCGCAGCACCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp AGGAGGGGGACGCACATCTGCTCTAGGGCCCTGTACAGAGGCAAGGGTGTGGCTCCGGGCTCCACACAGTaGATTTCCTCAGGTGCTGCG +
Preference number: 4 (lower is better)
Translates to: RRGTHICSRALYRGKGVAPGSTQ*ISSGAA
Trigger: CGCAGCACCTGAGGAAATGCACTGTGTGGAGCCCGG...AGCCACACCCTTGCCTCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp TGCTGTGGTACTCTTTCAGCAGCTCCTCCAGGGCCGCAGCATTCTCTTTCTTCTTCCTCAGGCCCCTGGTaGTCGCCGGCCTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: CCGTLSAAPPGPQHSLSSSSGPW*SPAWLR
Trigger: GCGCAGCCAGGCCGGCGACCACCAGGGGCCTGAGGA...AGAAGAAAGAGAATGCTGCGGCCCTGGAGGAGCTGCTGAAAGAGTACCACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR CCA 90 bp AGGTGTGCTCCAGCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTTGGGGGCGCTGGCGGCAGCTTaGACACAGGCCTGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: RCAPAPPSLLPKAPEILGALAAA*TQACGS
Trigger: CGAGCCACAGGCCTGTGTCCAAGCTGCCGCCAGCGC...CCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGCTGGAGCACACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp AGGTGTGCTCCAGCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTTGGGGGTGCGGGCAGATGTGTaGCACGTTCGGGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RCAPAPPSLLPKAPEILGVRADV*HVRGRW
Trigger: CCAGCGCCCCCGAACGTGCCACACATCTGCCCGCAC...CCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGCTGGAGCACACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp GCCCAGCCTCTGATGATACAGAGAATCCCGTGGGCTCCTAGGATCCAGCCAGGGTGCACGGTGTGGAGATaGTGGCGGTGCGGGCAGATG +
Preference number: 4 (lower is better)
Translates to: AQPLMIQRIPWAPRIQPGCTVWR*WRCGQM
Trigger: CATCTGCCCGCACCGCCACCATCTCCACACCGTGCA...CCCTGGCTGGATCCTAGGAGCCCACGGGATTCTCTGTATCATCAGAGGCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp CGGCCCCACATAAATAACCAGGTTGCTGAGCCAGAGTGGAAGTCAGGGCTGGGCGGGGAGGCCAGGCTGTaGGGAGTCAGGGAGATCACC +
Preference number: 4 (lower is better)
Translates to: RPHINNQVAEPEWKSGLGGEARL*GVREIT
Trigger: GGTGATCTCCCTGACTCCCCACAGCCTGGCCTCCCC...GCCCAGCCCTGACTTCCACTCTGGCTCAGCAACCTGGTTATTTATGTGGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp TCAGGTGCTGCGCTGACCAGTGTGGTAGCTGCTGGCCACGTGGCTATGGAGCCCTGCTGTCTCGTCTGCTaGGCCATTGCTTCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: SGAALTSVVAAGHVAMEPCCLVC*AIASRS
Trigger: GGACCGAGAAGCAATGGCCCAGCAGACGAGACAGCA...GGGCTCCATAGCCACGTGGCCAGCAGCTACCACACTGGTCAGCGCAGCACCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp GCCCAGCCTCTGATGATACAGAGAATCCCGTGGGCTCCTAGGATCCAGCCAGGGAGGCAGAGCCATGGATaGACAGCCCCATGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: AQPLMIQRIPWAPRIQPGRQSHG*TAPWGP
Trigger: AGGCCCCCATGGGGCTGTCCATCCATGGCTCTGCCT...CCCTGGCTGGATCCTAGGAGCCCACGGGATTCTCTGTATCATCAGAGGCTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp GACTTTCTGCTACCCCTTCCCTTTATAGACCTGCTGGAAGAGGAGGGGGACGCAAGTCAGGGCTGGGCCTaGCAGCCGCCTGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: DFLLPLPFIDLLEEEGDASQGWA*QPPALP
Trigger: GGGCAGTGCAGGCGGCTGCCAGGCCCAGCCCTGACT...TGCGTCCCCCTCCTCTTCCAGCAGGTCTATAAAGGGAAGGGGTAGCAGAAAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp AGGAGGGGGACGCACATCTGCTCTAGGGCCCTGTACAGAGGCAAGGGTGTGGCTCACTCATCACAGCCATaGGTACCCAGAGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RRGTHICSRALYRGKGVAHSSQP*VPRGAQ
Trigger: CTGGGCACCTCTGGGTACTCATGGCTGTGATGAGTG...AGCCACACCCTTGCCTCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp GGCCCCATTCAAAGCCATATCCTGGGCCACATGCGGCCCTTGGGCCGGGTTGGAAGACCGCCCCTCAGATaGCCAGGTTGCTCTCACTTA +
Preference number: 4 (lower is better)
Translates to: GPIQSHILGHMRPLGRVGRPPLR*PGCSHL
Trigger: TAAGTGAGAGCAACCTGGTCATCTGAGGGGCGGTCT...TCCAACCCGGCCCAAGGGCCGCATGTGGCCCAGGATATGGCTTTGAATGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp AGTCACATATGTGGCTCACACTATTTCTGTGGGACAGCCCTGCCTCTAGCTAGGCTCGCCCTGACGCCCTaGCTTGGCCCCGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SHICGSHYFCGTALPLARLALTP*LGPGLG
Trigger: CCCAAGGCCGGGGCCAAGGCAGGGCGTCAGGGCGAG...CCTAGCTAGAGGCAGGGCTGTCCCACAGAAATAGTGTGAGCCACATATGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp GACTTTCTGCTACCCCTTCCCTTTATAGACCTGCTGGAAGAGGAGGGGGACGCAGGGCGGGGCTCAGCCTaGTCCTGTACACAGTGCCCG +
Preference number: 4 (lower is better)
Translates to: DFLLPLPFIDLLEEEGDAGRGSA*SCTQCP
Trigger: CGGGCACTGTGTACAGGAGCAGGCTGAGCCCCGCCC...TGCGTCCCCCTCCTCTTCCAGCAGGTCTATAAAGGGAAGGGGTAGCAGAAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp AGGAACTGTGAGGGGAGGGCAGCCTGTCACGGTGCCCAACACAGGGCAGGGCTGCTCAGCCTTTGCACATaGTGTCCCTCTCTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: RNCEGRAACHGAQHRAGLLSLCT*CPSLWN
Trigger: GTTCCACAGAGAGGGACAGCATGTGCAAAGGCTGAG...CAGCCCTGCCCTGTGTTGGGCACCGTGACAGGCTGCCCTCCCCTCACAGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp AGGCTGGTTAATGTAGGTTTTGGCCCCGTTATCTCCCACCAGCCCACTCACTTGGCGCTGGCGGCAGCCTaGAGGGGGCACAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RLVNVGFGPVISHQPTHLALAAA*RGHRQK
Trigger: CTTCTGCCTGTGCCCCCTGCAGGCTGCCGCCAGCGC...CAAGTGAGTGGGCTGGTGGGAGATAACGGGGCCAAAACCTACATTAACCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR CCA 90 bp AGCTGTTTGCTGTGGTACTCTTTCAGCAGCTCCTCCAGGGCCGCAGCATTCTCTTCATCCTCAGGCCCCTaGTGGTCGCCGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SCLLWYSFSSSSRAAAFSSSSGP*WSPAWL
Trigger: CAGCCAGGCCGGCGACCACCAGGGGCCTGAGGATGA...AGAGAATGCTGCGGCCCTGGAGGAGCTGCTGAAAGAGTACCACAGCAAACAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR CCA 90 bp AGGAGGGGGACGCACATCTGCTCTAGGGCCCTGTACAGAGGCAAGGGTGTGGCTAGGTGCCCAGGAACATaGTTGACATGGAACGCGGGG +
Preference number: 4 (lower is better)
Translates to: RRGTHICSRALYRGKGVARCPGT*LTWNAG
Trigger: CCCCGCGTTCCATGTCAACCATGTTCCTGGGCACCT...AGCCACACCCTTGCCTCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp GGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCCGGGATCAAGTCTTTGGACACAGGCCTGTaGCTCGTCTGCACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GLAGQARALYHSPAGIKSLDTGL*LVCTSC
Trigger: ACAGCTGGTGCAGACGAGCCACAGGCCTGTGTCCAA...AGACTTGATCCCGGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp GCCCAGCCTCTGATGATACAGAGAATCCCGTGGGCTCCTAGGATCCAGCCAGGGTCGGGCCACTTCTTCTaGCTACAGCGGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AQPLMIQRIPWAPRIQPGSGHFF*LQREQQ
Trigger: CTGCTGCTCCCGCTGTAGCCAGAAGAAGTGGCCCGA...CCCTGGCTGGATCCTAGGAGCCCACGGGATTCTCTGTATCATCAGAGGCTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp AGGTGTGCTCCAGCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTTGGGGCACCTGCCTCCTCACTaGGGCAGACGCTCCCACCTC +
Preference number: 4 (lower is better)
Translates to: RCAPAPPSLLPKAPEILGHLPPH*GRRSHL
Trigger: GAGGTGGGAGCGTCTGCCCCAGTGAGGAGGCAGGTG...CCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGCTGGAGCACACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp AGGAACTGTGAGGGGAGGGCAGCCTGTCACGGTGCCCAACACAGGGCAGGGCTGCTGGACAGGTACAAGTaGAACAGGCGGATAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RNCEGRAACHGAQHRAGLLDRYK*NRRISW
Trigger: CCAGCTTATCCGCCTGTTCCACTTGTACCTGTCCAG...CAGCCCTGCCCTGTGTTGGGCACCGTGACAGGCTGCCCTCCCCTCACAGTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp TCAGGTGCTGCGCTGACCAGTGTGGTAGCTGCTGGCCACGTGGCTATGGAGCCCGTGGAACACATTCCCTaGCCCGCACATCTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SGAALTSVVAAGHVAMEPVEHIP*PAHLPH
Trigger: GTGAGGAAGATGTGCGGGCCAGGGAATGTGTTCCAC...GGGCTCCATAGCCACGTGGCCAGCAGCTACCACACTGGTCAGCGCAGCACCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGCTCGGAGACTGGCGGTaGCCGGTGCGCGGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRLGDWR*PVRGRR
Trigger: GCGCCTTCCGCGCACCGGCCACCGCCAGTCTCCGAG...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393580.2
3UTR CAA 72 bp CAGGCCTTGGTCTTTGCTGTCTCGTCTGCTGGGCCATaGCTTCTCGGTCCTCACAGTCCCAGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QALVFAVSSAGP*LLGPHSPSCSS
Trigger: GGAGCTGCAGCTGGGACTGTGAGGACCGAGAAGCAATGGCCCAGCAGACGAGACAGCAAAGACCAAGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp CGGCCCCACATAAATAACCAGGTTGCTGAGCCAGAGTGGAAGTCAGGGCTGGGCGCCCAGGAACATGGTTaGCATGGAACGCGGGGAACC +
Preference number: 4 (lower is better)
Translates to: RPHINNQVAEPEWKSGLGAQEHG*HGTRGT
Trigger: GGTTCCCCGCGTTCCATGTCAACCATGTTCCTGGGC...GCCCAGCCCTGACTTCCACTCTGGCTCAGCAACCTGGTTATTTATGTGGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp GGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCCGGGATCAAGTCTCACCTCAGACACCATTaGACTTGTCCGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GLAGQARALYHSPAGIKSHLRHH*TCPLLR
Trigger: CCTGAGCAGCGGACAAGTTCAATGGTGTCTGAGGTG...AGACTTGATCCCGGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp CGGCCCCACATAAATAACCAGGTTGCTGAGCCAGAGTGGAAGTCAGGGCTGGGCAGGGCCCAGCCTCCGTaGTGGTCTTCACCTCAGACA +
Preference number: 4 (lower is better)
Translates to: RPHINNQVAEPEWKSGLGRAQPP*WSSPQT
Trigger: TGTCTGAGGTGAAGACCATCACGGAGGCTGGGCCCT...GCCCAGCCCTGACTTCCACTCTGGCTCAGCAACCTGGTTATTTATGTGGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp AGGAGGGGGACGCACATCTGCTCTAGGGCCCTGTACAGAGGCAAGGGTGTGGCTGGCATAAGGCCCAGGTaGCCACTATGTGTTGGTGCT +
Preference number: 4 (lower is better)
Translates to: RRGTHICSRALYRGKGVAGIRPR*PLCVGA
Trigger: AGCACCAACACATAGTGGTCACCTGGGCCTTATGCC...AGCCACACCCTTGCCTCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp GGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCCGGGATCAAGTCTTCCCCAGGTGGGCACTaGCAAAGGGTTGTTGATGTC +
Preference number: 4 (lower is better)
Translates to: GLAGQARALYHSPAGIKSSPGGH*QRVVDV
Trigger: GACATCAACAACCCTTTGGCAGTGCCCACCTGGGGA...AGACTTGATCCCGGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp CGGCCCCACATAAATAACCAGGTTGCTGAGCCAGAGTGGAAGTCAGGGCTGGGCAGGGCCTGCATAATGTaGCCTGCCCTGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RPHINNQVAEPEWKSGLGRACIM*PALGPG
Trigger: ACCTGGACCCAGGGCAGGGCACATTATGCAGGCCCT...GCCCAGCCCTGACTTCCACTCTGGCTCAGCAACCTGGTTATTTATGTGGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTACCGCTGCTGGCCCCTaGTGCCACCTCCACGCCACG +
Preference number: 4 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFTAAGP*CHLHAT
Trigger: CGTGGCGTGGAGGTGGCAGCAGGGGCCAGCAGCGGT...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp AGTCACATATGTGGCTCACACTATTTCTGTGGGACAGCCCTGCCTCTAGCTAGGCTCCTCTGGGCCACCTaGCCGGGTGCCGTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SHICGSHYFCGTALPLARLLWAT*PGAVPR
Trigger: CCTGGGAACGGCACCCGGGCAGGTGGCCCAGAGGAG...CCTAGCTAGAGGCAGGGCTGTCCCACAGAAATAGTGTGAGCCACATATGTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGCTCCTCTGGGCCACCTaGCCGGGTGCCGTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRLLWAT*PGAVPR
Trigger: CCTGGGAACGGCACCCGGGCAGGTGGCCCAGAGGAG...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp AGGTGTGCTCCAGCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTTGGGGCCTCCTTGTGCGCCGTaGAGTGGTAGCCCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: RCAPAPPSLLPKAPEILGPPCAP*SGSPSA
Trigger: AGCGGAAGGGCTACCACTGCACGGCGCACAAGGAGG...CCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGCTGGAGCACACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp GCAGAGGCCCTGGAAGCAGCAAAAACGGGGCTGGATAAAGCTACTAATGGGAGGAGCGAGGCCAGGCCCTaGACGGTGTGGAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: AEALEAAKTGLDKATNGRSEARP*TVWRWW
Trigger: CCACCATCTCCACACCGTGCAGGGCCTGGCCTCGCT...CCTCCCATTAGTAGCTTTATCCAGCCCCGTTTTTGCTGCTTCCAGGGCCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp GCCCAGCCTCTGATGATACAGAGAATCCCGTGGGCTCCTAGGATCCAGCCAGGGAGGGGGACGCACATCTaGTCTAGGGCCCTGTACAGA +
Preference number: 4 (lower is better)
Translates to: AQPLMIQRIPWAPRIQPGRGTHI*SRALYR
Trigger: TCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCT...CCCTGGCTGGATCCTAGGAGCCCACGGGATTCTCTGTATCATCAGAGGCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp GGCCCCATTCAAAGCCATATCCTGGGCCACATGCGGCCCTTGGGCCGGGTTGGACGATGGCCACAGATGTaGCCAAGATTAGAACCCAGG +
Preference number: 4 (lower is better)
Translates to: GPIQSHILGHMRPLGRVGRWPQM*PRLEPR
Trigger: CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCG...TCCAACCCGGCCCAAGGGCCGCATGTGGCCCAGGATATGGCTTTGAATGGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp GACTTTCTGCTACCCCTTCCCTTTATAGACCTGCTGGAAGAGGAGGGGGACGCAGGCAGCCGCCTGCACTaGCCAGAAGCACTGGCACCA +
Preference number: 4 (lower is better)
Translates to: DFLLPLPFIDLLEEEGDAGSRLH*PEALAP
Trigger: TGGTGCCAGTGCTTCTGGGCAGTGCAGGCGGCTGCC...TGCGTCCCCCTCCTCTTCCAGCAGGTCTATAAAGGGAAGGGGTAGCAGAAAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp AGGTGTGCTCCAGCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTTGGGGGGGCTCCTCCCCAGGTaGGCACTGCCAAAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: RCAPAPPSLLPKAPEILGGLLPR*ALPKGC
Trigger: ACAACCCTTTGGCAGTGCCCACCTGGGGAGGAGCCC...CCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGCTGGAGCACACCT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp GCCCAGCCTCTGATGATACAGAGAATCCCGTGGGCTCCTAGGATCCAGCCAGGGAGGTGCCCAGGAACATaGTTGACATGGAACGCGGGG +
Preference number: 4 (lower is better)
Translates to: AQPLMIQRIPWAPRIQPGRCPGT*LTWNAG
Trigger: CCCCGCGTTCCATGTCAACCATGTTCCTGGGCACCT...CCCTGGCTGGATCCTAGGAGCCCACGGGATTCTCTGTATCATCAGAGGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTCCTGACGCCCTGCCTTaGCCCCGGCCTTGGGAACCC +
Preference number: 4 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFPDALP*PRPWEP
Trigger: GGGTTCCCAAGGCCGGGGCCAAGGCAGGGCGTCAGG...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGAGTCAGGGCTGGGCCTaGCAGCCGCCTGCACTGCCC +
Preference number: 4 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRSQGWA*QPPALP
Trigger: GGGCAGTGCAGGCGGCTGCCAGGCCCAGCCCTGACT...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGTCCTCAGGCCCCTGGTaGTCGCCGGCCTGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRSSGPW*SPAWSR
Trigger: CCGAGACCAGGCCGGCGACCACCAGGGGCCTGAGGA...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393580.2
3UTR CAA 72 bp GCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTaGGGGCTGGCTGGGCAGGCTAGGGCTCTGTATCAC +
Preference number: 4 (lower is better)
Translates to: APPSLLPKAPEI*GLAGQARALYH
Trigger: GTGATACAGAGCCCTAGCCTGCCCAGCCAGCCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp CACTTGGACACAGGCCTGTGGCTCGTCTGCACCAGCTGTTTGCTGTGGTACTCTGGGAACAGGGTGACTTaGGGGAGACCCAAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: HLDTGLWLVCTSCLLWYSGNRVT*GRPKWE
Trigger: CTCCCACTTGGGTCTCCCTCAAGTCACCCTGTTCCC...AGAGTACCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCCTGTGTCCAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR GCA 90 bp GACTTTCTGCTACCCCTTCCCTTTATAGACCTGCTGGAAGAGGAGGGGGACGCATGGAGATGGTGGCGGTaGGGGCAGATGTGTGGCACG +
Preference number: 4 (lower is better)
Translates to: DFLLPLPFIDLLEEEGDAWRWWR*GQMCGT
Trigger: CGTGCCACACATCTGCCCGCACCGCCACCATCTCCA...TGCGTCCCCCTCCTCTTCCAGCAGGTCTATAAAGGGAAGGGGTAGCAGAAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTTCATCCTCAGGCCCCTaGTGGTCGCCGGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFSSSGP*WSPAWL
Trigger: CAGCCAGGCCGGCGACCACCAGGGGCCTGAGGATGA...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp AGCAGGGAACAGGGTGACTTGAGGGAGACCCAAGTGGGAGATCCCCAGGAGGCAGCACCAGGACCCCAATaGTGTCCTCATTGGCATCCT +
Preference number: 4 (lower is better)
Translates to: SREQGDLRETQVGDPQEAAPGPQ*CPHWHP
Trigger: AGGATGCCAATGAGGACACCATTGGGGTCCTGGTGC...TGCCTCCTGGGGATCTCCCACTTGGGTCTCCCTCAAGTCACCCTGTTCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR CCA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTCACGTTCGGGGGCGCTaGCGGCAGCTTGGACACAGG +
Preference number: 4 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFHVRGR*RQLGHR
Trigger: CCTGTGTCCAAGCTGCCGCCAGCGCCCCCGAACGTG...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTAGGCCCTGCACGGTGTaGAGATGGTGGCGGTGCGGG +
Preference number: 4 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFRPCTV*RWWRCG
Trigger: CCCGCACCGCCACCATCTCCACACCGTGCAGGGCCT...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp GTAGCACCCGCTCCTGTGGCTCCTTTCCTCTCCACACTGGCCAAGCAGGAGCTGATACAGAGAATCCCGTaGGCTCCTAGGATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VAPAPVAPFLSTLAKQELIQRIP*APRIQP
Trigger: TGGCTGGATCCTAGGAGCCCACGGGATTCTCTGTAT...CAGCTCCTGCTTGGCCAGTGTGGAGAGGAAAGGAGCCACAGGAGCGGGTGCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp GACTTTCTGCTACCCCTTCCCTTTATAGACCTGCTGGAAGAGGAGGGGGACGCAAGGCAGAGCCATGGATaGACAGCCCCATGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: DFLLPLPFIDLLEEEGDARQSHG*TAPWGP
Trigger: AGGCCCCCATGGGGCTGTCCATCCATGGCTCTGCCT...TGCGTCCCCCTCCTCTTCCAGCAGGTCTATAAAGGGAAGGGGTAGCAGAAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp GCCCAGCCTCTGATGATACAGAGAATCCCGTGGGCTCCTAGGATCCAGCCAGGGACTGCCCAGAAGCACTaGCACCACAGGGACACAGAA +
Preference number: 4 (lower is better)
Translates to: AQPLMIQRIPWAPRIQPGTAQKH*HHRDTE
Trigger: TTCTGTGTCCCTGTGGTGCCAGTGCTTCTGGGCAGT...CCCTGGCTGGATCCTAGGAGCCCACGGGATTCTCTGTATCATCAGAGGCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTACGGGGCTCGGAGACTaGCGGTGGCCGGTGCGCGGA +
Preference number: 4 (lower is better)
Translates to: YFTVRKMDPAMATDVPKITGLGD*RWPVRG
Trigger: TCCGCGCACCGGCCACCGCCAGTCTCCGAGCCCCGT...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393580.2
CDS-3UTR CCA 90 bp GCAGAGGCCCTGGAAGCAGCAAAAACGGGGCTGGATAAAGCTACTAATGGGAGGTGGTGGTCGCCGGCCTaGTCTCGGTCCAAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: AEALEAAKTGLDKATNGRWWSPA*SRSKFP
Trigger: GGGAAACTTGGACCGAGACCAGGCCGGCGACCACCA...CCTCCCATTAGTAGCTTTATCCAGCCCCGTTTTTGCTGCTTCCAGGGCCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000393580.2
CDS-3UTR TCA 90 bp AGGTGTGCTCCAGCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTTGGGGCACTCATCACAGCCATaGGTACCCAGAGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RCAPAPPSLLPKAPEILGHSSQP*VPRGAQ
Trigger: CTGGGCACCTCTGGGTACTCATGGCTGTGATGAGTG...CCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGCTGGAGCACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp GACTTTCTGCTACCCCTTCCCTTTATAGACCTGCTGGAAGAGGAGGGGGACGCATCCGGTAGGCAGGGTTaGTTCCACTGCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: DFLLPLPFIDLLEEEGDASGRQG*FHCLHL
Trigger: GAGGTGGAGGCAGTGGAATCAACCCTGCCTACCGGA...TGCGTCCCCCTCCTCTTCCAGCAGGTCTATAAAGGGAAGGGGTAGCAGAAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp CGGCCCCACATAAATAACCAGGTTGCTGAGCCAGAGTGGAAGTCAGGGCTGGGCCACCTCAGACACCATTaGACTTGTCCGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: RPHINNQVAEPEWKSGLGHLRHH*TCPLLR
Trigger: CCTGAGCAGCGGACAAGTTCAATGGTGTCTGAGGTG...GCCCAGCCCTGACTTCCACTCTGGCTCAGCAACCTGGTTATTTATGTGGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp CGGCCCCACATAAATAACCAGGTTGCTGAGCCAGAGTGGAAGTCAGGGCTGGGCAGACCGCCCCTCAGATaGCCAGGTTGCTCTCACTTA +
Preference number: 4 (lower is better)
Translates to: RPHINNQVAEPEWKSGLGRPPLR*PGCSHL
Trigger: TAAGTGAGAGCAACCTGGTCATCTGAGGGGCGGTCT...GCCCAGCCCTGACTTCCACTCTGGCTCAGCAACCTGGTTATTTATGTGGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp AGGTGTGCTCCAGCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTTGGGGGGACACAGAAACCACTaGGGCCCAAGGTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RCAPAPPSLLPKAPEILGGHRNH*GPRCAP
Trigger: TGGAGCACACCTTGGGCCTCAGTGGTTTCTGTGTCC...CCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGCTGGAGCACACCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp TCCAGGGCCGCAGCATTCTCTTTCTTCTCTGTGATCAAGCGCACCAGGACCCCACAGCAGGGAACAGGGTaGCTTGAGGGAGACCCAAGT +
Preference number: 4 (lower is better)
Translates to: SRAAAFSFFSVIKRTRTPQQGTG*LEGDPS
Trigger: ACTTGGGTCTCCCTCAAGTCACCCTGTTCCCTGCTG...TGGGGTCCTGGTGCGCTTGATCACAGAGAAGAAAGAGAATGCTGCGGCCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR TCA 90 bp AGCTGTTTGCTGTGGTACTCTTTCAGCAGCTCCTCCAGGGCCGCAGCATTCTCTTCCGGTAGGCAGGGTTaGTTCCCAGGCCAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: SCLLWYSFSSSSRAAAFSSGRQG*FPGQQS
Trigger: AGACTGCTGGCCTGGGAATCAACCCTGCCTACCGGA...AGAGAATGCTGCGGCCCTGGAGGAGCTGCTGAAAGAGTACCACAGCAAACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR GCA 90 bp GTAGCACCCGCTCCTGTGGCTCCTTTCCTCTCCACACTGGCCAAGCAGGAGCTGATGAGTACCCAGAGGTaGCCAGGAACATGGTTGACA +
Preference number: 4 (lower is better)
Translates to: VAPAPVAPFLSTLAKQELMSTQR*PGTWLT
Trigger: TGTCAACCATGTTCCTGGGCACCTCTGGGTACTCAT...CAGCTCCTGCTTGGCCAGTGTGGAGAGGAAAGGAGCCACAGGAGCGGGTGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp AGTCACATATGTGGCTCACACTATTTCTGTGGGACAGCCCTGCCTCTAGCTAGGGTGTCTCACCACCGCTaGTGGCCCCTGCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: SHICGSHYFCGTALPLARVSHHR*WPLLPP
Trigger: AGGTGGCAGCAGGGGCCAGCAGCGGTGGTGAGACAC...CCTAGCTAGAGGCAGGGCTGTCCCACAGAAATAGTGTGAGCCACATATGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTGTGTCTCACCACCGCTaGTGGCCCCTGCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFVSHHR*WPLLPP
Trigger: AGGTGGCAGCAGGGGCCAGCAGCGGTGGTGAGACAC...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp AGTCACATATGTGGCTCACACTATTTCTGTGGGACAGCCCTGCCTCTAGCTAGGGTGCCGTTCCCAGGCTaGCGTGTCTCACCACCGCTG +
Preference number: 4 (lower is better)
Translates to: SHICGSHYFCGTALPLARVPFPG*RVSPPL
Trigger: CAGCGGTGGTGAGACACGGCAGCCTGGGAACGGCAC...CCTAGCTAGAGGCAGGGCTGTCCCACAGAAATAGTGTGAGCCACATATGTGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp GCAGAGGCCCTGGAAGCAGCAAAAACGGGGCTGGATAAAGCTACTAATGGGAGGCCAGGCCTTGGTCTTTaGTGTCTCGTCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: AEALEAAKTGLDKATNGRPGLGL*CLVCWA
Trigger: GGCCCAGCAGACGAGACAGCAAAGACCAAGGCCTGG...CCTCCCATTAGTAGCTTTATCCAGCCCCGTTTTTGCTGCTTCCAGGGCCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTTGCTCCTGTACACAGTaGCCGCCGGCCACCTGCCTC +
Preference number: 4 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFCSCTQ*PPATCL
Trigger: GAGGCAGGTGGCCGGCGGGCACTGTGTACAGGAGCA...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGCAGGCCCCTCCCCTCTaGCAAGCCCAGCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRQAPPL*QAQPLM
Trigger: CATCAGAGGCTGGGCTTGGCAGAGGGGAGGGGCCTG...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGGGCAGCCGCCTGCACTaGCCAGAAGCACTGGCACCA +
Preference number: 4 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRGSRLH*PEALAP
Trigger: TGGTGCCAGTGCTTCTGGGCAGTGCAGGCGGCTGCC...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGGCGATGACCGCGTACTaGGCGGCTGTCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRAMTAY*AAVSSG
Trigger: CCCAGAGGAGACAGCCGCCCAGTACGCGGTCATCGC...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp GCAGAGGCCCTGGAAGCAGCAAAAACGGGGCTGGATAAAGCTACTAATGGGAGGCTGCCAAAGGGTTGTTaGTGTCAGGGTGGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: AEALEAAKTGLDKATNGRLPKGC*CQGGER
Trigger: CCTCTCGCCACCCTGACATCAACAACCCTTTGGCAG...CCTCCCATTAGTAGCTTTATCCAGCCCCGTTTTTGCTGCTTCCAGGGCCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp GCAGAGGCCCTGGAAGCAGCAAAAACGGGGCTGGATAAAGCTACTAATGGGAGGGAGTGTATCTCGAGTTaGCATGCCCACCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: AEALEAAKTGLDKATNGRECISS*HAHLGL
Trigger: GAGGCCCAGGTGGGCATGGCAACTCGAGATACACTC...CCTCCCATTAGTAGCTTTATCCAGCCCCGTTTTTGCTGCTTCCAGGGCCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp GCCCAGCCTCTGATGATACAGAGAATCCCGTGGGCTCCTAGGATCCAGCCAGGGATGAGTACCCAGAGGTaGCCAGGAACATGGTTGACA +
Preference number: 4 (lower is better)
Translates to: AQPLMIQRIPWAPRIQPGMSTQR*PGTWLT
Trigger: TGTCAACCATGTTCCTGGGCACCTCTGGGTACTCAT...CCCTGGCTGGATCCTAGGAGCCCACGGGATTCTCTGTATCATCAGAGGCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp GGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCCGGGATCAAGTCTTCTGCACCAGCTGTTTaGTGTGGTACTCTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GLAGQARALYHSPAGIKSSAPAV*CGTLSA
Trigger: TGCTGAAAGAGTACCACAGCAAACAGCTGGTGCAGA...AGACTTGATCCCGGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGCTCGCCCTGACGCCCTaGCTTGGCCCCGGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVLALTP*LGPGLG
Trigger: CCCAAGGCCGGGGCCAAGGCAGGGCGTCAGGGCGAG...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTGGCCTGGCAGCCGCCTaGACTGCCCAGAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: YFTVRKMDPAMATDVPKIGLAAA*TAQKHW
Trigger: CCAGTGCTTCTGGGCAGTGCAGGCGGCTGCCAGGCC...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp GCAGAGGCCCTGGAAGCAGCAAAAACGGGGCTGGATAAAGCTACTAATGGGAGGCAAGCAGGAGCTGAATaGTTTGGAGGCTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: AEALEAAKTGLDKATNGRQAGAE*FGGSLG
Trigger: GCCCAGGGAGCCTCCAAAGCATTCAGCTCCTGCTTG...CCTCCCATTAGTAGCTTTATCCAGCCCCGTTTTTGCTGCTTCCAGGGCCTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp GACTTTCTGCTACCCCTTCCCTTTATAGACCTGCTGGAAGAGGAGGGGGACGCATGCTGTCTCGTCTGCTaGGCCATTGCTTCTCGGTCC +
Preference number: 4 (lower is better)
Translates to: DFLLPLPFIDLLEEEGDACCLVC*AIASRS
Trigger: GGACCGAGAAGCAATGGCCCAGCAGACGAGACAGCA...TGCGTCCCCCTCCTCTTCCAGCAGGTCTATAAAGGGAAGGGGTAGCAGAAAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp GTAGCACCCGCTCCTGTGGCTCCTTTCCTCTCCACACTGGCCAAGCAGGAGCTGGTGACCACTATGTGTTaGTGCTCAGCCTTTGCACAT +
Preference number: 4 (lower is better)
Translates to: VAPAPVAPFLSTLAKQELVTTMC*CSAFAH
Trigger: ATGTGCAAAGGCTGAGCACCAACACATAGTGGTCAC...CAGCTCCTGCTTGGCCAGTGTGGAGAGGAAAGGAGCCACAGGAGCGGGTGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp GTAGCACCCGCTCCTGTGGCTCCTTTCCTCTCCACACTGGCCAAGCAGGAGCTGCCTAGGAATTTTAGATaGAGACGCTCTGTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: VAPAPVAPFLSTLAKQELPRNFR*RRSVLP
Trigger: CGGCAAGACAGAGCGTCTCCATCTAAAATTCCTAGG...CAGCTCCTGCTTGGCCAGTGTGGAGAGGAAAGGAGCCACAGGAGCGGGTGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR TCA 90 bp GTTTGCTGTGGTACTCTTTCAGCAGCTCCTCCAGGGCCGCAGCATTCTCTTTCTCTGCCAAAGGGTTGTTaGTGTCAGGGTGGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: VCCGTLSAAPPGPQHSLSLPKGC*CQGGER
Trigger: CCTCTCGCCACCCTGACATCAACAACCCTTTGGCAG...AGAAAGAGAATGCTGCGGCCCTGGAGGAGCTGCTGAAAGAGTACCACAGCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR TCA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTGCCCAGGAACATGGTTaGCATGGAACGCGGGGAACC +
Preference number: 4 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFAQEHG*HGTRGT
Trigger: GGTTCCCCGCGTTCCATGTCAACCATGTTCCTGGGC...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTTGCCCAACAGCCCCATaGGGCAGAAGACAGGGACGA +
Preference number: 4 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFCPTAP*GRRQGR
Trigger: TCGTCCCTGTCTTCTGCCTCATGGGGCTGTTGGGCA...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGGGTAGCCCTTCCGCTTaGGGAGGTTGCACACCAGGA +
Preference number: 4 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRGSPSA*GGCTPG
Trigger: TCCTGGTGTGCAACCTCCTCAAGCGGAAGGGCTACC...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp AGGGCACAGAGAAAAGGAGCTCCTCGTGACAGCACTTTCCCACCTTTTATTATTATGGTGATCTCGCCCTaGCGCCCTGCCTTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: RAQRKGAPRDSTFPPFIIMVISP*RPALAP
Trigger: CGGGGCCAAGGCAGGGCGTCAGGGCGAGATCACCAT...AATAATAAAAGGTGGGAAAGTGCTGTCACGAGGAGCTCCTTTTCTCTGTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR TCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGAGGGCCCAGCCTCCGTaGTGGTCTTCACCTCAGACA +
Preference number: 4 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRRAQPP*WSSPQT
Trigger: TGTCTGAGGTGAAGACCATCACGGAGGCTGGGCCCT...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp GCAGAGGCCCTGGAAGCAGCAAAAACGGGGCTGGATAAAGCTACTAATGGGAGGTCCCCAGGTGGGCACTaGCAAAGGGTTGTTGATGTC +
Preference number: 4 (lower is better)
Translates to: AEALEAAKTGLDKATNGRSPGGH*QRVVDV
Trigger: GACATCAACAACCCTTTGGCAGTGCCCACCTGGGGA...CCTCCCATTAGTAGCTTTATCCAGCCCCGTTTTTGCTGCTTCCAGGGCCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTTATCTCGAGTTGCCATaGCCACCTGGGCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFYLELP*PPGPPA
Trigger: GGCTGGAGGCCCAGGTGGGCATGGCAACTCGAGATA...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp TTTCTTCTCTGTGATCAAGCGCACCAGGACCCCAATGGTGTCCTCATTGGCATCTATCTCGAGTTGCCATaGCCACCTGGGCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: FLLCDQAHQDPNGVLIGIYLELP*PPGPPA
Trigger: GGCTGGAGGCCCAGGTGGGCATGGCAACTCGAGATA...GATGCCAATGAGGACACCATTGGGGTCCTGGTGCGCTTGATCACAGAGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR GCA 90 bp TGCTGTGGTACTCTTTCAGCAGCTCCTCCAGGGCCGCAGCATTCTCTTTCTTCTGAGTGTATCTCGAGTTaGCATGCCCACCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: CCGTLSAAPPGPQHSLSSECISS*HAHLGL
Trigger: GAGGCCCAGGTGGGCATGGCAACTCGAGATACACTC...AGAAGAAAGAGAATGCTGCGGCCCTGGAGGAGCTGCTGAAAGAGTACCACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR GCA 90 bp TATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGAGTTTCGTGCCGTTCCCAGGCTaGCGTGTCTCACCACCGCTG +
Preference number: 4 (lower is better)
Translates to: YSTHGRGWRHKDRAMVSFVPFPG*RVSPPL
Trigger: CAGCGGTGGTGAGACACGGCAGCCTGGGAACGGCAC...GAAACTCACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp TATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGAGTTTCCAGGCCCCTCCCCTCTaGCAAGCCCAGCCTCTGATG +
Preference number: 4 (lower is better)
Translates to: YSTHGRGWRHKDRAMVSFQAPPL*QAQPLM
Trigger: CATCAGAGGCTGGGCTTGGCAGAGGGGAGGGGCCTG...GAAACTCACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp AGGGCACAGAGAAAAGGAGCTCCTCGTGACAGCACTTTCCCACCTTTTATTATTGGCCTGGCAGCCGCCTaGACTGCCCAGAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: RAQRKGAPRDSTFPPFIIGLAAA*TAQKHW
Trigger: CCAGTGCTTCTGGGCAGTGCAGGCGGCTGCCAGGCC...AATAATAAAAGGTGGGAAAGTGCTGTCACGAGGAGCTCCTTTTCTCTGTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp AGGTGTGCTCCAGCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTTGGGGCAATGGTGTCCTCATTaGCATCCTCAGTCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: RCAPAPPSLLPKAPEILGQWCPH*HPQSGR
Trigger: CCTACCGGACTGAGGATGCCAATGAGGACACCATTG...CCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGCTGGAGCACACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp TCACTTGGACACAGGCCTGTGGCTCGTCTGCACCAGCTGTTTGCTGTGGTACTCCAATGGTGTCCTCATTaGCATCCTCAGTCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: SLGHRPVARLHQLFAVVLQWCPH*HPQSGR
Trigger: CCTACCGGACTGAGGATGCCAATGAGGACACCATTG...GAGTACCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCCTGTGTCCAAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR CCA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTTCGGGCCACTTCTTCTaGCTACAGCGGGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFSGHFF*LQREQQ
Trigger: CTGCTGCTCCCGCTGTAGCCAGAAGAAGTGGCCCGA...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp TATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGAGTTTCGGGGAGGCCAGGCTGTaGGGAGTCAGGGAGATCACC +
Preference number: 4 (lower is better)
Translates to: YSTHGRGWRHKDRAMVSFGEARL*GVREIT
Trigger: GGTGATCTCCCTGACTCCCCACAGCCTGGCCTCCCC...GAAACTCACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGGATGGACAGGCAGTaGGCCCATGCCTGCACGGCC +
Preference number: 4 (lower is better)
Translates to: YFTVRKMDPAMATDVPKIRMDRQ*AHACTA
Trigger: GGCCGTGCAGGCATGGGCCCACTGCCTGTCCATCCT...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp AGTCACATATGTGGCTCACACTATTTCTGTGGGACAGCCCTGCCTCTAGCTAGGTTGATGGGTCTCCTCTaGGCCCTGCTTCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SHICGSHYFCGTALPLARLMGLL*ALLPWL
Trigger: CAGCCAGGGAAGCAGGGCCCAGAGGAGACCCATCAA...CCTAGCTAGAGGCAGGGCTGTCCCACAGAAATAGTGTGAGCCACATATGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGCAGTGTGGTAGCTGCTaGCCACGTGGCTATGGAGCC +
Preference number: 4 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRQCGSC*PRGYGA
Trigger: GGCTCCATAGCCACGTGGCCAGCAGCTACCACACTG...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp TTTGCTGTGGTACTCTTTCAGCAGCTCCTCCAGGGCCGCAGCATTCTCTTTCTTACCAGCCCACTCACTTaGACACAGGCCTGTGGCTCG +
Preference number: 4 (lower is better)
Translates to: FAVVLFQQLLQGRSILFLTSPLT*TQACGS
Trigger: CGAGCCACAGGCCTGTGTCCAAGTGAGTGGGCTGGT...AAGAAAGAGAATGCTGCGGCCCTGGAGGAGCTGCTGAAAGAGTACCACAGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR TCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGCTGCCAAAGGGTTGTTaGTGTCAGGGTGGCGAGAGG +
Preference number: 4 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRLPKGC*CQGGER
Trigger: CCTCTCGCCACCCTGACATCAACAACCCTTTGGCAG...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGGCCCCATGGGGGCCTTaGAGGCAGAGGCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVAPWGP*RQRPWK
Trigger: CTTCCAGGGCCTCTGCCTTCAAGGCCCCCATGGGGC...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp AGTCACATATGTGGCTCACACTATTTCTGTGGGACAGCCCTGCCTCTAGCTAGGTGGCCAAGCAGGAGCTaGATGCTTTGGAGGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SHICGSHYFCGTALPLARWPSRS*MLWRLP
Trigger: AGGGAGCCTCCAAAGCATTCAGCTCCTGCTTGGCCA...CCTAGCTAGAGGCAGGGCTGTCCCACAGAAATAGTGTGAGCCACATATGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp AGGGCACAGAGAAAAGGAGCTCCTCGTGACAGCACTTTCCCACCTTTTATTATTAGCGAGGCCAGGCCCTaGACGGTGTGGAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: RAQRKGAPRDSTFPPFIISEARP*TVWRWW
Trigger: CCACCATCTCCACACCGTGCAGGGCCTGGCCTCGCT...AATAATAAAAGGTGGGAAAGTGCTGTCACGAGGAGCTCCTTTTCTCTGTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp AGGTGTGCTCCAGCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTTGGGGATTGAACTTGTCCGCTaGTCAGGAATTCGAGCCACG +
Preference number: 4 (lower is better)
Translates to: RCAPAPPSLLPKAPEILGIELVR*SGIRAT
Trigger: CGTGGCTCGAATTCCTGAGCAGCGGACAAGTTCAAT...CCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGCTGGAGCACACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGCTCGGCCTTGTTCTCTaGTGGGGGCTTCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRLGLVL*WGLQPL
Trigger: AAGTGGCTGAAGCCCCCAGCAGAGAACAAGGCCGAG...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTCGTCTGCTGGGCCATTaGTTCTCGGTCCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFRLLGH*FSVLTV
Trigger: GACTGTGAGGACCGAGAAGCAATGGCCCAGCAGACG...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp TTTCTTCTCTGTGATCAAGCGCACCAGGACCCCAATGGTGTCCTCATTGGCATCTTGGACACAGGCCTGTaGCTCGTCTGCACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: FLLCDQAHQDPNGVLIGILDTGL*LVCTSC
Trigger: ACAGCTGGTGCAGACGAGCCACAGGCCTGTGTCCAA...GATGCCAATGAGGACACCATTGGGGTCCTGGTGCGCTTGATCACAGAGAAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR CCA 90 bp GACTTTCTGCTACCCCTTCCCTTTATAGACCTGCTGGAAGAGGAGGGGGACGCAAAATGGACCCAGCGATaGCCACAGATGTGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: DFLLPLPFIDLLEEEGDAKWTQR*PQMCPR
Trigger: TCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTT...TGCGTCCCCCTCCTCTTCCAGCAGGTCTATAAAGGGAAGGGGTAGCAGAAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGGAGCTGAAGAGGCCCTaGGTACTGAGACGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRELKRP*VLRRLS
Trigger: GGAGAGACGTCTCAGTACCCAGGGCCTCTTCAGCTC...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTAAGCTCCTGAGATCTTaGGGCTGGCTGGGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFKLLRS*GWLGRL
Trigger: TAGCCTGCCCAGCCAGCCCCAAGATCTCAGGAGCTT...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp GCAGAGGCCCTGGAAGCAGCAAAAACGGGGCTGGATAAAGCTACTAATGGGAGGACACATGGAAGGGGGTaGAGACACAAGGATAGGGCA +
Preference number: 4 (lower is better)
Translates to: AEALEAAKTGLDKATNGRTHGRG*RHKDRA
Trigger: TGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGT...CCTCCCATTAGTAGCTTTATCCAGCCCCGTTTTTGCTGCTTCCAGGGCCTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTTGCTGTCCCTCTCTGTaGAACACATTCCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFCCPSL*NTFPGP
Trigger: CGGGCCAGGGAATGTGTTCCACAGAGAGGGACAGCA...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR TCA 90 bp TATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGAGTTTCGGTAGCCCTTCCGCTTaGGGAGGTTGCACACCAGGA +
Preference number: 4 (lower is better)
Translates to: YSTHGRGWRHKDRAMVSFGSPSA*GGCTPG
Trigger: TCCTGGTGTGCAACCTCCTCAAGCGGAAGGGCTACC...GAAACTCACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp TTGCTGTGGTACTCTTTCAGCAGCTCCTCCAGGGCCGCAGCATTCTCTTTCTTCTCTCTTTCTTCTCTGTaGTCAAGCGCACCAGGACCC +
Preference number: 4 (lower is better)
Translates to: LLWYSFSSSSRAAAFSFFSLSSL*SSAPGP
Trigger: GGGTCCTGGTGCGCTTGATCACAGAGAAGAAAGAGA...GAAGAAAGAGAATGCTGCGGCCCTGGAGGAGCTGCTGAAAGAGTACCACAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR TCA 90 bp TATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGAGTTTCCCACAGACAAGATGGTaGTCTCGCCCTGACGCCCTG +
Preference number: 4 (lower is better)
Translates to: YSTHGRGWRHKDRAMVSFPQTRW*SRPDAL
Trigger: CAGGGCGTCAGGGCGAGATCACCATCTTGTCTGTGG...GAAACTCACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp CACTCACTTGGACACAGGCCTGTGGCTCGTCTGCACCAGCTGTTTGCTGTGGTATCTGCACCAGCTGTTTaGTGTGGTACTCTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: HSLGHRPVARLHQLFAVVSAPAV*CGTLSA
Trigger: TGCTGAAAGAGTACCACAGCAAACAGCTGGTGCAGA...TACCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCCTGTGTCCAAGTGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR GCA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTGGCCTGTGGCTCGTCTaGACCAGCTGTTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: YFTVRKMDPAMATDVPKIGLWLV*TSCLLW
Trigger: CCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCC...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp AGTCACATATGTGGCTCACACTATTTCTGTGGGACAGCCCTGCCTCTAGCTAGGGTGCATTTCCTCAGGTaGTGCGCTGACCAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SHICGSHYFCGTALPLARVHFLR*CADQCG
Trigger: ACCACACTGGTCAGCGCAGCACCTGAGGAAATGCAC...CCTAGCTAGAGGCAGGGCTGTCCCACAGAAATAGTGTGAGCCACATATGTGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp TATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGAGTTTCACGGTGTGGAGATGGTaGCGGTGCGGGCAGATGTGT +
Preference number: 4 (lower is better)
Translates to: YSTHGRGWRHKDRAMVSFTVWRW*RCGQMC
Trigger: ACACATCTGCCCGCACCGCCACCATCTCCACACCGT...GAAACTCACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTGGCCTTGTTCTCTGCTaGGGGCTTCAGCCACTTTGT +
Preference number: 4 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFGLVLC*GLQPLC
Trigger: ACAAAGTGGCTGAAGCCCCCAGCAGAGAACAAGGCC...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp CGGCCCCACATAAATAACCAGGTTGCTGAGCCAGAGTGGAAGTCAGGGCTGGGCCAGCAAAAACGGGGCTaGATAAAGCTACTAATGGGA +
Preference number: 4 (lower is better)
Translates to: RPHINNQVAEPEWKSGLGQQKRG*IKLLMG
Trigger: TCCCATTAGTAGCTTTATCCAGCCCCGTTTTTGCTG...GCCCAGCCCTGACTTCCACTCTGGCTCAGCAACCTGGTTATTTATGTGGGGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGACTGCCCAGAAGCACTaGCACCACAGGGACACAGAA +
Preference number: 4 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRTAQKH*HHRDTE
Trigger: TTCTGTGTCCCTGTGGTGCCAGTGCTTCTGGGCAGT...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGTCTCTTTCTTCTCTGTaGTCAAGCGCACCAGGACCC +
Preference number: 4 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRSLSSL*SSAPGP
Trigger: GGGTCCTGGTGCGCTTGATCACAGAGAAGAAAGAGA...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp AGGAGGGGGACGCACATCTGCTCTAGGGCCCTGTACAGAGGCAAGGGTGTGGCTAGGATAGGGCAATGGTaGGTTTCAATAAATAAGAGA +
Preference number: 4 (lower is better)
Translates to: RRGTHICSRALYRGKGVARIGQW*VSINKR
Trigger: TCTCTTATTTATTGAAACTCACCATTGCCCTATCCT...AGCCACACCCTTGCCTCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTGAGAACCAGATGAGTTaGTGGGTCTCCTCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: YFTVRKMDPAMATDVPKIENQMS*WVSSGP
Trigger: GGGCCCAGAGGAGACCCATCAACTCATCTGGTTCTC...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp GACTTTCTGCTACCCCTTCCCTTTATAGACCTGCTGGAAGAGGAGGGGGACGCATCTGCACCAGCTGTTTaGTGTGGTACTCTTTCAGCA +
Preference number: 4 (lower is better)
Translates to: DFLLPLPFIDLLEEEGDASAPAV*CGTLSA
Trigger: TGCTGAAAGAGTACCACAGCAAACAGCTGGTGCAGA...TGCGTCCCCCTCCTCTTCCAGCAGGTCTATAAAGGGAAGGGGTAGCAGAAAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGCGATGGCCACAGATGTaGCCAAGATTAGAACCCAGG +
Preference number: 4 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRRWPQM*PRLEPR
Trigger: CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCG...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGTTGGTGCTCAGCCTTTaGACATGCTGTCCCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRLVLSL*TCCPSL
Trigger: CAGAGAGGGACAGCATGTGCAAAGGCTGAGCACCAA...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp GCAGAGGCCCTGGAAGCAGCAAAAACGGGGCTGGATAAAGCTACTAATGGGAGGACCACTATGTGTTGGTaGTCAGCCTTTGCACATGCT +
Preference number: 4 (lower is better)
Translates to: AEALEAAKTGLDKATNGRTTMCW*SAFAHA
Trigger: AGCATGTGCAAAGGCTGAGCACCAACACATAGTGGT...CCTCCCATTAGTAGCTTTATCCAGCCCCGTTTTTGCTGCTTCCAGGGCCTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp AGGTGTGCTCCAGCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTTGGGGCAGCAAAAACGGGGCTaGATAAAGCTACTAATGGGA +
Preference number: 4 (lower is better)
Translates to: RCAPAPPSLLPKAPEILGQQKRG*IKLLMG
Trigger: TCCCATTAGTAGCTTTATCCAGCCCCGTTTTTGCTG...CCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGCTGGAGCACACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAAGCTCCTGAGATCTTaGGGCTGGCTGGGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: YFTVRKMDPAMATDVPKIKLLRS*GWLGRL
Trigger: TAGCCTGCCCAGCCAGCCCCAAGATCTCAGGAGCTT...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGTCCGGTAGGCAGGGTTaGTTCCACTGCCTCCACCTC +
Preference number: 4 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVSGRQG*FHCLHL
Trigger: GAGGTGGAGGCAGTGGAATCAACCCTGCCTACCGGA...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp TATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGAGTTTCAGAGGCCCTGGGTACTaGGACGTCTCTCCTTACTTC +
Preference number: 4 (lower is better)
Translates to: YSTHGRGWRHKDRAMVSFRGPGY*DVSPYF
Trigger: GAAGTAAGGAGAGACGTCTCAGTACCCAGGGCCTCT...GAAACTCACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp TATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGAGTTTCGCACCAGGACCCCAATaGTGTCCTCATTGGCATCCT +
Preference number: 4 (lower is better)
Translates to: YSTHGRGWRHKDRAMVSFAPGPQ*CPHWHP
Trigger: AGGATGCCAATGAGGACACCATTGGGGTCCTGGTGC...GAAACTCACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTGCACCAGGACCCCAATaGTGTCCTCATTGGCATCCT +
Preference number: 4 (lower is better)
Translates to: YFTVRKMDPAMATDVPKIAPGPQ*CPHWHP
Trigger: AGGATGCCAATGAGGACACCATTGGGGTCCTGGTGC...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGACGGTGTGGAGATGGTaGCGGTGCGGGCAGATGTGT +
Preference number: 4 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVTVWRW*RCGQMC
Trigger: ACACATCTGCCCGCACCGCCACCATCTCCACACCGT...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp TATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGAGTTTCGGCCTTGTTCTCTGCTaGGGGCTTCAGCCACTTTGT +
Preference number: 4 (lower is better)
Translates to: YSTHGRGWRHKDRAMVSFGLVLC*GLQPLC
Trigger: ACAAAGTGGCTGAAGCCCCCAGCAGAGAACAAGGCC...GAAACTCACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGCGTCTGCTGGGCCATTaGTTCTCGGTCCTCACAGTC +
Preference number: 4 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVRLLGH*FSVLTV
Trigger: GACTGTGAGGACCGAGAAGCAATGGCCCAGCAGACG...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp GACTTTCTGCTACCCCTTCCCTTTATAGACCTGCTGGAAGAGGAGGGGGACGCATCTGTATCACAGTCCTaGCGGGATCAAGTCTATTTT +
Preference number: 4 (lower is better)
Translates to: DFLLPLPFIDLLEEEGDASVSQS*RDQVYF
Trigger: AAAATAGACTTGATCCCGGCAGGACTGTGATACAGA...TGCGTCCCCCTCCTCTTCCAGCAGGTCTATAAAGGGAAGGGGTAGCAGAAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp GCAGAGGCCCTGGAAGCAGCAAAAACGGGGCTGGATAAAGCTACTAATGGGAGGTCTGTATCACAGTCCTaGCGGGATCAAGTCTATTTT +
Preference number: 4 (lower is better)
Translates to: AEALEAAKTGLDKATNGRSVSQS*RDQVYF
Trigger: AAAATAGACTTGATCCCGGCAGGACTGTGATACAGA...CCTCCCATTAGTAGCTTTATCCAGCCCCGTTTTTGCTGCTTCCAGGGCCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp TATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGAGTTTCATACAGAGAATCCCGTaGGCTCCTAGGATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: YSTHGRGWRHKDRAMVSFIQRIP*APRIQP
Trigger: TGGCTGGATCCTAGGAGCCCACGGGATTCTCTGTAT...GAAACTCACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTACAGAGGCAAGGGTGTaGCTAATTACCAAGGAATGG +
Preference number: 4 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFTEARV*LITKEW
Trigger: CCATTCCTTGGTAATTAGCCACACCCTTGCCTCTGT...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGGAGCTGAAGAGGCCCTaGGTACTGAGACGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVELKRP*VLRRLS
Trigger: GGAGAGACGTCTCAGTACCCAGGGCCTCTTCAGCTC...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR TCA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAAAAGGAGCTCCTCGTaGCAGCACTTTCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: YFTVRKMDPAMATDVPKIKRSSS*QHFPTF
Trigger: AAAGGTGGGAAAGTGCTGTCACGAGGAGCTCCTTTT...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR GCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGCTTTGCTGTCTCGTCTaGTGGGCCATTGCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVLCCLV*WAIASR
Trigger: CCGAGAAGCAATGGCCCAGCAGACGAGACAGCAAAG...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CCA 90 bp AGGGCACAGAGAAAAGGAGCTCCTCGTGACAGCACTTTCCCACCTTTTATTATTCAATGGTGTCCTCATTaGCATCCTCAGTCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: RAQRKGAPRDSTFPPFIIQWCPH*HPQSGR
Trigger: CCTACCGGACTGAGGATGCCAATGAGGACACCATTG...AATAATAAAAGGTGGGAAAGTGCTGTCACGAGGAGCTCCTTTTCTCTGTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp AGGGCACAGAGAAAAGGAGCTCCTCGTGACAGCACTTTCCCACCTTTTATTATTCTCACACTATTTCTGTaGGACAGCCCTGCCTCTAGC +
Preference number: 4 (lower is better)
Translates to: RAQRKGAPRDSTFPPFIILTLFL*DSPASS
Trigger: GCTAGAGGCAGGGCTGTCCCACAGAAATAGTGTGAG...AATAATAAAAGGTGGGAAAGTGCTGTCACGAGGAGCTCCTTTTCTCTGTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR TCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGTCTCTTTCTTCTCTGTaGTCAAGCGCACCAGGACCC +
Preference number: 4 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVSLSSL*SSAPGP
Trigger: GGGTCCTGGTGCGCTTGATCACAGAGAAGAAAGAGA...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGATTGAACTTGTCCGCTaGTCAGGAATTCGAGCCACG +
Preference number: 4 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVIELVR*SGIRAT
Trigger: CGTGGCTCGAATTCCTGAGCAGCGGACAAGTTCAAT...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR GCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGGCCGGGTTGGAAGCTTaGCCTAGGAATTTTAGATGG +
Preference number: 4 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVAGLEA*PRNFRW
Trigger: CCATCTAAAATTCCTAGGGCAAGCTTCCAACCCGGC...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CCA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGAACAGGCGGATAAGCTaGGAAGGGCACAGAGAAAAG +
Preference number: 4 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVNRRIS*EGHREK
Trigger: CTTTTCTCTGTGCCCTTCCCAGCTTATCCGCCTGTT...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR TCA 90 bp AGTCACATATGTGGCTCACACTATTTCTGTGGGACAGCCCTGCCTCTAGCTAGGAGGATAGGGCAATGGTaGGTTTCAATAAATAAGAGA +
Preference number: 4 (lower is better)
Translates to: SHICGSHYFCGTALPLARRIGQW*VSINKR
Trigger: TCTCTTATTTATTGAAACTCACCATTGCCCTATCCT...CCTAGCTAGAGGCAGGGCTGTCCCACAGAAATAGTGTGAGCCACATATGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS GCA 90 bp GACAGCCACCACGCAGGGCCGGCCCGGAGTCGCGGCCGGAGGACCTaGAGGTCACGGGGCTCGGAGACTGGCGGTGGCCGGTGCGCGGAA +
Preference number: 5 (lower is better)
Translates to: DSHHAGPARSRGRRT*RSRGSETGGGRCAE
Trigger: TTCCGCGCACCGGCCACCGCCAGTCTCCGAGCCCCGTGACCTGCAGGTCCTCCGGCCGCGACTCCGGGCCGGCCCTGCGTGGTGGCTGTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393580.2
CDS GCA 90 bp GCCGTTCCCAGGCTGCCGTGTCTCACCACCGCTGCTGGCCCCTGCTaGCACCTCCACGCCACGTCGGGCCCGCCGCCCCCACTCATCACA +
Preference number: 5 (lower is better)
Translates to: AVPRLPCLTTAAGPC*HLHATSGPPPPLIT
Trigger: TGTGATGAGTGGGGGCGGCGGGCCCGACGTGGCGTGGAGGTGGCAGCAGGGGCCAGCAGCGGTGGTGAGACACGGCAGCCTGGGAACGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS CCA 90 bp CAGGCCCTGCACGGTGTGGAGATGGTGGCGGTGCGGGCAGATGTGTaGCACGTTCGGGGGCGCTGGCGGCAGCCTGCAGGGGGCACAGGC +
Preference number: 5 (lower is better)
Translates to: QALHGVEMVAVRADV*HVRGRWRQPAGGTG
Trigger: GCCTGTGCCCCCTGCAGGCTGCCGCCAGCGCCCCCGAACGTGCCACACATCTGCCCGCACCGCCACCATCTCCACACCGTGCAGGGCCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537771.1
CDS GCA 90 bp CCAGAGAGCGAGGCCAGGCCCTGCACGGTGTGGAGATGGTGGCGGTaGGGGCAGATGTGTGGCACGTTCGGGGGCGCTGGCGGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: PESEARPCTVWRWWR*GQMCGTFGGAGGSL
Trigger: CAGGCTGCCGCCAGCGCCCCCGAACGTGCCACACATCTGCCCGCACCGCCACCATCTCCACACCGTGCAGGGCCTGGCCTCGCTCTCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537771.1
CDS GCA 90 bp CCAGAGAGCGAGGCCAGGCCCTGCACGGTGTGGAGATGGTGGCGGTaGGGGCAGATGTGTGGCACGTTCGGGGGCGCTGGCGGCAGCTTG +
Preference number: 5 (lower is better)
Translates to: PESEARPCTVWRWWR*GQMCGTFGGAGGSL
Trigger: CAAGCTGCCGCCAGCGCCCCCGAACGTGCCACACATCTGCCCGCACCGCCACCATCTCCACACCGTGCAGGGCCTGGCCTCGCTCTCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000539134.1
ENST00000545886.1
CDS GCA 90 bp TCTGGTATACAGGCGGTGCTGGGTTCGCCCTGGTGGGAATCTGGCTaGGCCGCGGCAGCTCCAGCTCGGCTCCCCGTTCGACTCGGCGCC +
Preference number: 5 (lower is better)
Translates to: SGIQAVLGSPWWESG*AAAAPARLPVRLGA
Trigger: GGCGCCGAGTCGAACGGGGAGCCGAGCTGGAGCTGCCGCGGCGCAGCCAGATTCCCACCAGGGCGAACCCAGCACCGCCTGTATACCAGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545687.5
CDS CCA 90 bp CAGGCCCTGCACGGTGTGGAGATGGTGGCGGTGCGGGCAGATGTGTaGCACGTTCGGGGGCGCTGGCGGCAGCTTGGACACAGGCCTGTG +
Preference number: 5 (lower is better)
Translates to: QALHGVEMVAVRADV*HVRGRWRQLGHRPV
Trigger: CACAGGCCTGTGTCCAAGCTGCCGCCAGCGCCCCCGAACGTGCCACACATCTGCCCGCACCGCCACCATCTCCACACCGTGCAGGGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000539134.1
ENST00000545886.1
CDS CCA 90 bp GAGATGGTGGCGGTGCGGGCAGATGTGTGGCACGTTCGGGGGCGCTaGCGGCAGCCTGCAGGGGGCACAGGCAGAAGTGGCCATAGGCCA +
Preference number: 5 (lower is better)
Translates to: EMVAVRADVWHVRGR*RQPAGGTGRSGHRP
Trigger: TGGCCTATGGCCACTTCTGCCTGTGCCCCCTGCAGGCTGCCGCCAGCGCCCCCGAACGTGCCACACATCTGCCCGCACCGCCACCATCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537771.1
CDS GCA 90 bp GTGCCCTGCCCTGGGTCCAGGTCGGGCTCCTCCCCAGGTGGGCACTaGCAAAGGGTTGTTGATGTCAGGGTGGCGAGAGGCCAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: VPCPGSRSGSSPGGH*QRVVDVRVARGQGS
Trigger: GCTGCCCTGGCCTCTCGCCACCCTGACATCAACAACCCTTTGGCAGTGCCCACCTGGGGAGGAGCCCGACCTGGACCCAGGGCAGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000544075.5
ENST00000545687.5
CDS GCA 90 bp CCTGGCAGGGAAGGCAGAGCAGGGCAAGACTCTGCCCACCGCGGCTaGCTCACAGGCTCCTGGAGGAAACCCTCCTCTCCTGGGCACTGG +
Preference number: 5 (lower is better)
Translates to: PGREGRAGQDSAHRG*LTGSWRKPSSPGHW
Trigger: CCAGTGCCCAGGAGAGGAGGGTTTCCTCCAGGAGCCTGTGAGGCAGCCGCGGTGGGCAGAGTCTTGCCCTGCTCTGCCTTCCCTGCCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS CCA 90 bp AGCCCCATGAGGCAGAAGACAGGGACGATGGCGATGACCGCGTACTaGGCGGCTGTCTCCTCTGGGCCACCTGCCCGGGTGCCGTTCCCA +
Preference number: 5 (lower is better)
Translates to: SPMRQKTGTMAMTAY*AAVSSGPPARVPFP
Trigger: TGGGAACGGCACCCGGGCAGGTGGCCCAGAGGAGACAGCCGCCCAGTACGCGGTCATCGCCATCGTCCCTGTCTTCTGCCTCATGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000545886.1
CDS CCA 90 bp AGAGTCTGGTATACAGGCGGTGCTGGGTTCGCCCTGGTGGGAATCTaGCTGCGCCGCGGCAGCTCCAGCTCGGCTCCCCGTTCGACTCGG +
Preference number: 5 (lower is better)
Translates to: RVWYTGGAGFALVGI*LRRGSSSSAPRSTR
Trigger: CCGAGTCGAACGGGGAGCCGAGCTGGAGCTGCCGCGGCGCAGCCAGATTCCCACCAGGGCGAACCCAGCACCGCCTGTATACCAGACTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545687.5
CDS TCA 90 bp CCCTGCTGCCACCTCCACGCCACGTCGGGCCCGCCGCCCCCACTCTaGGCATCACAGACGATGGAGGCAGGACAAAAGCAGAGTGACACA +
Preference number: 5 (lower is better)
Translates to: PCCHLHATSGPPPPL*ASQTMEAGQKQSDT
Trigger: TGTGTCACTCTGCTTTTGTCCTGCCTCCATCGTCTGTGATGCTCAGAGTGGGGGCGGCGGGCCCGACGTGGCGTGGAGGTGGCAGCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS GCA 90 bp GCGGAACCTGCCCACAGACAAGATGGTGATCTCGCCCTGACGCCCTaGCTTGGCCCCGGCCTTGGGAACCCTGGTCGGGTTAGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: AEPAHRQDGDLALTP*LGPGLGNPGRVRQK
Trigger: CTTCTGCCTAACCCGACCAGGGTTCCCAAGGCCGGGGCCAAGGCAGGGCGTCAGGGCGAGATCACCATCTTGTCTGTGGGCAGGTTCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000537771.1
ENST00000539134.1
CDS GCA 90 bp ACCAAAACCCGAGCCCCTTATGGTGCCTGCCCAGGACAGGACAGCTaGCCTGCCAGCCCTCCTGCCACAGGGCACTCCTGCTACTCCAGG +
Preference number: 5 (lower is better)
Translates to: TKTRAPYGACPGQDS*PASPPATGHSCYSR
Trigger: CCTGGAGTAGCAGGAGTGCCCTGTGGCAGGAGGGCTGGCAGGGCAGCTGTCCTGTCCTGGGCAGGCACCATAAGGGGCTCGGGTTTTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS TCA 90 bp CGTGCCCGGGGTCACACAGCAAGTTCATGGACCAGAGCCTTAGCCTaGGAGGCCCGGGTGCCATGGGGGCCAAGATGCTGCCCTAGGGAT +
Preference number: 5 (lower is better)
Translates to: RARGHTASSWTRALA*EARVPWGPRCCPRD
Trigger: ATCCCTAGGGCAGCATCTTGGCCCCCATGGCACCCGGGCCTCTCAGGCTAAGGCTCTGGTCCATGAACTTGCTGTGTGACCCCGGGCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS CCA 90 bp GGCCAGCAGTCTCCACAGAGTGTATCTCGAGTTGCCATGCCCACCTaGGCCTCCAGCCTCCTCCAAAGGCTGCAACGGGCATGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: GQQSPQSVSRVAMPT*ASSLLQRLQRAWGW
Trigger: CCAGCCCCATGCCCGTTGCAGCCTTTGGAGGAGGCTGGAGGCCCAGGTGGGCATGGCAACTCGAGATACACTCTGTGGAGACTGCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000544075.5
ENST00000545687.5
CDS-3UTR CAA 90 bp GGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCCGGGATCAAGTCTGCCGGCACAGCAGACTaGGCTTCATCCTCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: GLAGQARALYHSPAGIKSAGTAD*ASSSGP
Trigger: GGGGCCTGAGGATGAAGCCAAGTCTGCTGTGCCGGC...AGACTTGATCCCGGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp GGGCTGGCTGGGCAGGCTAGGGCTCTGTATCACAGTCCTGCCGGGATCAAGTCTAGCCCCATGGGGGCCTaGAAGGCAGAGGCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: GLAGQARALYHSPAGIKSSPMGA*KAEALE
Trigger: TTCCAGGGCCTCTGCCTTCAAGGCCCCCATGGGGCT...AGACTTGATCCCGGCAGGACTGTGATACAGAGCCCTAGCCTGCCCAGCCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp TCAGGTGCTGCGCTGACCAGTGTGGTAGCTGCTGGCCACGTGGCTATGGAGCCCTGGAGACGCTCTGTCTaGCCGGGTGTAGCACCCGCT +
Preference number: 5 (lower is better)
Translates to: SGAALTSVVAAGHVAMEPWRRSV*PGVAPA
Trigger: AGCGGGTGCTACACCCGGCAAGACAGAGCGTCTCCA...GGGCTCCATAGCCACGTGGCCAGCAGCTACCACACTGGTCAGCGCAGCACCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS TCA 90 bp GTCCAGGTCGGGCTCCTCCCCAGGTGGGCACTGCCAAAGGGTTGTTaGTGTCAGGGTGGCGAGAGGCCAGGGCAGCAGCATAAGGAAGCA +
Preference number: 5 (lower is better)
Translates to: VQVGLLPRWALPKGC*CQGGERPGQQHKEA
Trigger: TGCTTCCTTATGCTGCTGCCCTGGCCTCTCGCCACCCTGACATCAACAACCCTTTGGCAGTGCCCACCTGGGGAGGAGCCCGACCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000544075.5
ENST00000545687.5
CDS TCA 90 bp TTCCTGCACCCAACAGCCCGGGTGCATAGAGGCTTCAGGGCCACGTaGACTCCAGTCATTGAATTGGGCGGGCGAGGGGGCGGTGCGTCA +
Preference number: 5 (lower is better)
Translates to: FLHPTARVHRGFRAT*TPVIELGGRGGGAS
Trigger: TGACGCACCGCCCCCTCGCCCGCCCAATTCAATGACTGGAGTTCACGTGGCCCTGAAGCCTCTATGCACCCGGGCTGTTGGGTGCAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539134.1
ENST00000545886.1
CDS GCA 90 bp TTCGGGGGCGCTGGCGGCAGCTTGGACACAGGCCTGTGGCTCGTCTaGACCAGCTGTTTGCTGTGGTACTCTTTCAGCAGCTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: FGGAGGSLDTGLWLV*TSCLLWYSFSSSSR
Trigger: CCTGGAGGAGCTGCTGAAAGAGTACCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCCTGTGTCCAAGCTGCCGCCAGCGCCCCCGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000539134.1
ENST00000545886.1
CDS GCA 90 bp ATCTCACCTGCCCACAGACAAGATGGTGATCTCGCCCTGACGCCCTaGCTTGGCCCCGGCCTTGGGAACCCTGGTCGGGTTAGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: ISPAHRQDGDLALTP*LGPGLGNPGRVRQK
Trigger: CTTCTGCCTAACCCGACCAGGGTTCCCAAGGCCGGGGCCAAGGCAGGGCGTCAGGGCGAGATCACCATCTTGTCTGTGGGCAGGTGAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS GCA 90 bp CCTGGTGGTCGCCGGCCTGGGGATACAAAGTATGGGGTGCAGTCCTaGTCTGCTCTGTCTTGCACTGGCTCTGTGGCCTGCCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: PGGRRPGDTKYGVQS*SALSCTGSVACLQR
Trigger: CCTCTGCAGGCAGGCCACAGAGCCAGTGCAAGACAGAGCAGAGCAGGACTGCACCCCATACTTTGTATCCCCAGGCCGGCGACCACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545687.5
CDS-3UTR CAA 90 bp GCCCAGCCTCTGATGATACAGAGAATCCCGTGGGCTCCTAGGATCCAGCCAGGGGCCGGCACAGCAGACTaGGCTTCATCCTCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: AQPLMIQRIPWAPRIQPGAGTAD*ASSSGP
Trigger: GGGGCCTGAGGATGAAGCCAAGTCTGCTGTGCCGGC...CCCTGGCTGGATCCTAGGAGCCCACGGGATTCTCTGTATCATCAGAGGCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp AGGAACTGTGAGGGGAGGGCAGCCTGTCACGGTGCCCAACACAGGGCAGGGCTGTTCCGCTTGAGGAGGTaGCACACCAGGATGCCCAAC +
Preference number: 5 (lower is better)
Translates to: RNCEGRAACHGAQHRAGLFRLRR*HTRMPN
Trigger: GTTGGGCATCCTGGTGTGCAACCTCCTCAAGCGGAA...CAGCCCTGCCCTGTGTTGGGCACCGTGACAGGCTGCCCTCCCCTCACAGTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CAA 90 bp GTAGCACCCGCTCCTGTGGCTCCTTTCCTCTCCACACTGGCCAAGCAGGAGCTGCGGTTCTCCTCGGCCTaGTTCTCTGCTGGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: VAPAPVAPFLSTLAKQELRFSSA*FSAGGF
Trigger: GAAGCCCCCAGCAGAGAACAAGGCCGAGGAGAACCG...CAGCTCCTGCTTGGCCAGTGTGGAGAGGAAAGGAGCCACAGGAGCGGGTGCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS TCA 90 bp CATCTGGGCAAGGCTTCACCCAGGGTAGGATCCACTGAAGCCACTTaGCCAGCTGTGCCACCTCTGCTCTGCCCCCACGGCCACACCTTC +
Preference number: 5 (lower is better)
Translates to: HLGKASPRVGSTEAT*PAVPPLLCPHGHTF
Trigger: GAAGGTGTGGCCGTGGGGGCAGAGCAGAGGTGGCACAGCTGGTCAAGTGGCTTCAGTGGATCCTACCCTGGGTGAAGCCTTGCCCAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS TCA 90 bp CAGATCCCCACATCTGGGCAAGGCTTCACCCAGGGTAGGATCCACTaGAGCCACTTGACCAGCTGTGCCACCTCTGCTCTGCCCCCACGG +
Preference number: 5 (lower is better)
Translates to: QIPTSGQGFTQGRIH*SHLTSCATSALPPR
Trigger: CCGTGGGGGCAGAGCAGAGGTGGCACAGCTGGTCAAGTGGCTTCAGTGGATCCTACCCTGGGTGAAGCCTTGCCCAGATGTGGGGATCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS GCA 90 bp TGGTCGCCGGCCTGGGGATACAAAGTATGGGGTGCAGTCCTGCTCTaGTCTGTCTTGCACTGGCTCTGTGGCCTGCCTGCAGAGGGCTGT +
Preference number: 5 (lower is better)
Translates to: WSPAWGYKVWGAVLL*SVLHWLCGLPAEGC
Trigger: ACAGCCCTCTGCAGGCAGGCCACAGAGCCAGTGCAAGACAGAGCAGAGCAGGACTGCACCCCATACTTTGTATCCCCAGGCCGGCGACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545687.5
CDS CCA 90 bp ATTTACGTTCAGTGCCTGGCACAGAGTCTGGTATACAGGCGGTGCTaGGTTCGCCCTGGTGGGAATCTGGCTGCGCCGCGGCAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: IYVQCLAQSLVYRRC*VRPGGNLAAPRQLQ
Trigger: CTGGAGCTGCCGCGGCGCAGCCAGATTCCCACCAGGGCGAACCCAGCACCGCCTGTATACCAGACTCTGTGCCAGGCACTGAACGTAAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545687.5
CDS-3UTR CAA 90 bp GTAGCACCCGCTCCTGTGGCTCCTTTCCTCTCCACACTGGCCAAGCAGGAGCTGTCCAGGCCTTGGTCTTaGCTGTCTCGTCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: VAPAPVAPFLSTLAKQELSRPWS*LSRLLG
Trigger: GCCCAGCAGACGAGACAGCAAAGACCAAGGCCTGGA...CAGCTCCTGCTTGGCCAGTGTGGAGAGGAAAGGAGCCACAGGAGCGGGTGCTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS TCA 90 bp CCACGAGGGCCCAGCCTCCGTGATGGTCTTCACCTCAGACACCATTaGACTTGTCCGCTGCTCAGGAATTCGAGCCACGCGGAACCTGCC +
Preference number: 5 (lower is better)
Translates to: PRGPSLRDGLHLRHH*TCPLLRNSSHAEPA
Trigger: GGCAGGTTCCGCGTGGCTCGAATTCCTGAGCAGCGGACAAGTTCAATGGTGTCTGAGGTGAAGACCATCACGGAGGCTGGGCCCTCGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000539134.1
CDS TCA 90 bp GCTGTGGGGAGTCAGGGAGATCACCCCACGAGGGCCCAGCCTCCGTaGTGGTCTTCACCTCAGACACCATTGAACTTGTCCGCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: AVGSQGDHPTRAQPP*WSSPQTPLNLSAAQ
Trigger: CTGAGCAGCGGACAAGTTCAATGGTGTCTGAGGTGAAGACCATCACGGAGGCTGGGCCCTCGTGGGGTGATCTCCCTGACTCCCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000539134.1
ENST00000545886.1
CDS GCA 90 bp GCGGCAGCTTGGACACAGGCCTGTGGCTCGTCTGCACCAGCTGTTTaGTGTGGTACTCTTTCAGCAGCTCCTCCAGGGCCGCAGCATTCT +
Preference number: 5 (lower is better)
Translates to: AAAWTQACGSSAPAV*CGTLSAAPPGPQHS
Trigger: AGAATGCTGCGGCCCTGGAGGAGCTGCTGAAAGAGTACCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCCTGTGTCCAAGCTGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000539134.1
ENST00000545886.1
CDS GCA 90 bp GTCACCACGTTTCCTCCTGCCGGCTTACTGCTCCTGTCCGCTTCCTaGCCCCGCCAGACTTCAGTGTCAGGACTTAGAAGGGTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: VTTFPPAGLLLLSAS*PRQTSVSGLRRVSG
Trigger: GCCAGAGACCCTTCTAAGTCCTGACACTGAAGTCTGGCGGGGGCAGGAAGCGGACAGGAGCAGTAAGCCGGCAGGAGGAAACGTGGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS CCA 90 bp GGCCCAAATCTCAAGGGTGTGAGAATGGGCCACGATGATCAGCCCTaGGCCCAGCAGCAAACAGAGCTCCCAGGACTTGCACCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: GPNLKGVRMGHDDQP*AQQQTELPGLAPRQ
Trigger: CTGCCTGGGTGCAAGTCCTGGGAGCTCTGTTTGCTGCTGGGCCCAGGGCTGATCATCGTGGCCCATTCTCACACCCTTGAGATTTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539134.1
ENST00000545886.1
CDS-3UTR CAA 90 bp CACTCACTTGGACACAGGCCTGTGGCTCGTCTGCACCAGCTGTTTGCTGTGGTAGCCGGCACAGCAGACTaGGCTTCATCCTCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: HSLGHRPVARLHQLFAVVAGTAD*ASSSGP
Trigger: GGGGCCTGAGGATGAAGCCAAGTCTGCTGTGCCGGC...TACCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCCTGTGTCCAAGTGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR CAA 90 bp GGCCCCATTCAAAGCCATATCCTGGGCCACATGCGGCCCTTGGGCCGGGTTGGAGTTGGTGCTCAGCCTTaGCACATGCTGTCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: GPIQSHILGHMRPLGRVGVGAQP*HMLSLS
Trigger: AGAGAGGGACAGCATGTGCAAAGGCTGAGCACCAAC...TCCAACCCGGCCCAAGGGCCGCATGTGGCCCAGGATATGGCTTTGAATGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS TCA 90 bp CCACGAGGGCCCAGCCTCCGTGATGGTCTTCACCTCAGACACCATTaGACTTGTCCGCTGCTCAGGAATTCGAGCCACGCGGAACCTGTG +
Preference number: 5 (lower is better)
Translates to: PRGPSLRDGLHLRHH*TCPLLRNSSHAEPV
Trigger: CACAGGTTCCGCGTGGCTCGAATTCCTGAGCAGCGGACAAGTTCAATGGTGTCTGAGGTGAAGACCATCACGGAGGCTGGGCCCTCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS GCA 90 bp TCTTTCAGCAGCTCCTCCAGGGCCGCAGCATTCTCTGTGGGTAGCTaGAGTCAGACCCTCACTGTGGCCATATGGGACACACCTCCCACC +
Preference number: 5 (lower is better)
Translates to: SFSSSSRAAAFSVGS*SQTLTVAIWDTPPT
Trigger: GGTGGGAGGTGTGTCCCATATGGCCACAGTGAGGGTCTGACTGCAGCTACCCACAGAGAATGCTGCGGCCCTGGAGGAGCTGCTGAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS GCA 90 bp TTTATTTACGTTCAGTGCCTGGCACAGAGTCTGGTATACAGGCGGTaGTGGGTTCGCCCTGGTGGGAATCTGGCTGCGCCGCGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: FIYVQCLAQSLVYRR*WVRPGGNLAAPRQL
Trigger: GAGCTGCCGCGGCGCAGCCAGATTCCCACCAGGGCGAACCCAGCACCGCCTGTATACCAGACTCTGTGCCAGGCACTGAACGTAAATAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545687.5
CDS CCA 90 bp GCTGGGGATGCAAAGGTCAACCCACTGCCCTCCTGTTTTCCCTTCTaGCCATCGAAGCATTGTCCTGAACAAGGCCTCCTCAGGACGGCC +
Preference number: 5 (lower is better)
Translates to: AGDAKVNPLPSCFPF*PSKHCPEQGLLRTA
Trigger: GGCCGTCCTGAGGAGGCCTTGTTCAGGACAATGCTTCGATGGCCAGAAGGGAAAACAGGAGGGCAGTGGGTTGACCTTTGCATCCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS CCA 90 bp AGCTTGGACACAGGCCTGTGGCTCGTCTGCACCAGCTGTTTGCTGTaGTACTCTTTCAGCAGCTCCTCCAGGGCCGCAGCATTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: SLDTGLWLVCTSCLL*YSFSSSSRAAAFSV
Trigger: CACAGAGAATGCTGCGGCCCTGGAGGAGCTGCTGAAAGAGTACCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCCTGTGTCCAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS-3UTR CAA 90 bp GACTTTCTGCTACCCCTTCCCTTTATAGACCTGCTGGAAGAGGAGGGGGACGCACGGTTCTCCTCGGCCTaGTTCTCTGCTGGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: DFLLPLPFIDLLEEEGDARFSSA*FSAGGF
Trigger: GAAGCCCCCAGCAGAGAACAAGGCCGAGGAGAACCG...TGCGTCCCCCTCCTCTTCCAGCAGGTCTATAAAGGGAAGGGGTAGCAGAAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp GACCCAAGTGGGAGATCCCCAGGAGGCAGGCTGGTTAATGTAGGTTTTGGCCCCAGGGAACAGGGTGACTaGAGGGAGACCCAAGTGGGA +
Preference number: 5 (lower is better)
Translates to: DPSGRSPGGRLVNVGFGPREQGD*RETQVG
Trigger: TCCCACTTGGGTCTCCCTCAAGTCACCCTGTTCCCT...GGGGCCAAAACCTACATTAACCAGCCTGCCTCCTGGGGATCTCCCACTTGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS TCA 90 bp CACAGGGCACTCCTGCTACTCCAGGCCAGAGGTCAGAGGTCACCTTaGGTAACTCCAAGGCCACCATCCGACCCTGGAACCATACACACA +
Preference number: 5 (lower is better)
Translates to: HRALLLLQARGQRSP*VTPRPPSDPGTIHT
Trigger: TGTGTGTATGGTTCCAGGGTCGGATGGTGGCCTTGGAGTTACTCAAGGTGACCTCTGACCTCTGGCCTGGAGTAGCAGGAGTGCCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS GCA 90 bp GGGGTGCAGTCCTGCTCTGCTCTGTCTTGCACTGGCTCTGTGGCCTaGCTGCAGAGGGCTGTGGTAAGGCTTTTATTTACGTTCAGTGCC +
Preference number: 5 (lower is better)
Translates to: GVQSCSALSCTGSVA*LQRAVVRLLFTFSA
Trigger: GGCACTGAACGTAAATAAAAGCCTTACCACAGCCCTCTGCAGGCAGGCCACAGAGCCAGTGCAAGACAGAGCAGAGCAGGACTGCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545687.5
CDS CCA 90 bp AGCTTGGACACAGGCCTGTGGCTCGTCTGCACCAGCTGTTTGCTGTaGTACTCTTTCAGCAGCTCCTCCAGGGCCGCAGCATTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: SLDTGLWLVCTSCLL*YSFSSSSRAAAFSF
Trigger: GAAAGAGAATGCTGCGGCCCTGGAGGAGCTGCTGAAAGAGTACCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCCTGTGTCCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000539134.1
CDS CCA 90 bp ATGCCTGTCCCTCCGGTTCCAGGCCTTGTAACTCAAACTACAGCCTaGAACCAAAACCCGAGCCCCTTATGGTGCCTGCCCAGGACAGGA +
Preference number: 5 (lower is better)
Translates to: MPVPPVPGLVTQTTA*NQNPSPLWCLPRTG
Trigger: TCCTGTCCTGGGCAGGCACCATAAGGGGCTCGGGTTTTGGTTCCAGGCTGTAGTTTGAGTTACAAGGCCTGGAACCGGAGGGACAGGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS-3UTR CAA 90 bp TCACTTGGACACAGGCCTGTGGCTCGTCTGCACCAGCTGTTTGCTGTGGTACTCGGCACTGCCAAAGGGTaGTTGATGTCAGGGTGGCGA +
Preference number: 5 (lower is better)
Translates to: SLGHRPVARLHQLFAVVLGTAKG*LMSGWR
Trigger: TCGCCACCCTGACATCAACAACCCTTTGGCAGTGCC...GAGTACCACAGCAAACAGCTGGTGCAGACGAGCCACAGGCCTGTGTCCAAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR CAA 90 bp AGGTGTGCTCCAGCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTTGGGGAGAGTGTATCTCGAGTaGCCATGCCCACCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: RCAPAPPSLLPKAPEILGRVYLE*PCPPGP
Trigger: AGGCCCAGGTGGGCATGGCAACTCGAGATACACTCT...CCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGCTGGAGCACACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp AGGAGGGGGACGCACATCTGCTCTAGGGCCCTGTACAGAGGCAAGGGTGTGGCTCAGACACCATTGAACTaGTCCGCTGCTCAGGAATTC +
Preference number: 5 (lower is better)
Translates to: RRGTHICSRALYRGKGVAQTPLN*SAAQEF
Trigger: GAATTCCTGAGCAGCGGACAAGTTCAATGGTGTCTG...AGCCACACCCTTGCCTCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp GCAGAGGCCCTGGAAGCAGCAAAAACGGGGCTGGATAAAGCTACTAATGGGAGGTCCAGGCCTTGGTCTTaGCTGTCTCGTCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: AEALEAAKTGLDKATNGRSRPWS*LSRLLG
Trigger: GCCCAGCAGACGAGACAGCAAAGACCAAGGCCTGGA...CCTCCCATTAGTAGCTTTATCCAGCCCCGTTTTTGCTGCTTCCAGGGCCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp TGCTGTGGTACTCTTTCAGCAGCTCCTCCAGGGCCGCAGCATTCTCTTTCTTCTCACCAGCCCACTCACTaGGACACAGGCCTGTGGCTC +
Preference number: 5 (lower is better)
Translates to: CCGTLSAAPPGPQHSLSSHQPTH*DTGLWL
Trigger: GAGCCACAGGCCTGTGTCCAAGTGAGTGGGCTGGTG...AGAAGAAAGAGAATGCTGCGGCCCTGGAGGAGCTGCTGAAAGAGTACCACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS TCA 90 bp GGGAAGTCTCTAGGAAAACAAGCACAGTCCCAGGCAAAATGGCCCTaGGTCACCACGTTTCCTCCTGCCGGCTTACTGCTCCTGTCCGCT +
Preference number: 5 (lower is better)
Translates to: GKSLGKQAQSQAKWP*VTTFPPAGLLLLSA
Trigger: AGCGGACAGGAGCAGTAAGCCGGCAGGAGGAAACGTGGTGACTCAGGGCCATTTTGCCTGGGACTGTGCTTGTTTTCCTAGAGACTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS TCA 90 bp GGGCACTGGGATGGGGTCAGACCTTCTCCTCACCTTTCTTCTCTGTaGTCAAGCGCACCAGGACCCCAATGGTGTCCTCATTGGCATCCT +
Preference number: 5 (lower is better)
Translates to: GHWDGVRPSPHLSSL*SSAPGPQWCPHWHP
Trigger: AGGATGCCAATGAGGACACCATTGGGGTCCTGGTGCGCTTGATCACAGAGAAGAAAGGTGAGGAGAAGGTCTGACCCCATCCCAGTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS GCA 90 bp GCCTCCGTGATGGTCTTCACCTCAGACACCATTGAACTTGTCCGCTaGTCAGGAATTCGAGCCACGCGGAACCTGCCCACAGACAAGATG +
Preference number: 5 (lower is better)
Translates to: ASVMVFTSDTIELVR*SGIRATRNLPTDKM
Trigger: CATCTTGTCTGTGGGCAGGTTCCGCGTGGCTCGAATTCCTGAGCAGCGGACAAGTTCAATGGTGTCTGAGGTGAAGACCATCACGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000539134.1
CDS-3UTR CAA 90 bp AGGTGTGCTCCAGCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTTGGGGACTGCCAAAGGGTTGTaGATGTCAGGGTGGCGAGAG +
Preference number: 5 (lower is better)
Translates to: RCAPAPPSLLPKAPEILGTAKGL*MSGWRE
Trigger: CTCTCGCCACCCTGACATCAACAACCCTTTGGCAGT...CCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGCTGGAGCACACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp AGCTGTTTGCTGTGGTACTCTTTCAGCAGCTCCTCCAGGGCCGCAGCATTCTCTAGAGTGTATCTCGAGTaGCCATGCCCACCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: SCLLWYSFSSSSRAAAFSRVYLE*PCPPGP
Trigger: AGGCCCAGGTGGGCATGGCAACTCGAGATACACTCT...AGAGAATGCTGCGGCCCTGGAGGAGCTGCTGAAAGAGTACCACAGCAAACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR CAA 90 bp CGGCCCCACATAAATAACCAGGTTGCTGAGCCAGAGTGGAAGTCAGGGCTGGGCGTCTGCACCAGCTGTTaGCTGTGGTACTCTTTCAGC +
Preference number: 5 (lower is better)
Translates to: RPHINNQVAEPEWKSGLGVCTSC*LWYSFS
Trigger: GCTGAAAGAGTACCACAGCAAACAGCTGGTGCAGAC...GCCCAGCCCTGACTTCCACTCTGGCTCAGCAACCTGGTTATTTATGTGGGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS GCA 90 bp TCTGGGTCTGCACTGTCTCCTCCTCAGCCTCAAGGAGCTGTGGGCTaGCACCCTACCCAGAACTCCCCAAATCTACAGCAAACTGCTATT +
Preference number: 5 (lower is better)
Translates to: SGSALSPPQPQGAVG*HPTQNSPNLQQTAI
Trigger: AATAGCAGTTTGCTGTAGATTTGGGGAGTTCTGGGTAGGGTGGCAGCCCACAGCTCCTTGAGGCTGAGGAGGAGACAGTGCAGACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539134.1
ENST00000545886.1
CDS CCA 90 bp AGGTCAGAGGTCACCTTGAGTAACTCCAAGGCCACCATCCGACCCTaGAACCATACACACAACTGTGGCCTCCAAAGAGTCCAGATCCCC +
Preference number: 5 (lower is better)
Translates to: RSEVTLSNSKATIRP*NHTHNCGLQRVQIP
Trigger: GGGGATCTGGACTCTTTGGAGGCCACAGTTGTGTGTATGGTTCCAGGGTCGGATGGTGGCCTTGGAGTTACTCAAGGTGACCTCTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS CCA 90 bp GCTGTGGTAAGGCTTTTATTTACGTTCAGTGCCTGGCACAGAGTCTaGTATACAGGCGGTGCTGGGTTCGCCCTGGTGGGAATCTGGCTG +
Preference number: 5 (lower is better)
Translates to: AVVRLLFTFSAWHRV*YTGGAGFALVGIWL
Trigger: CAGCCAGATTCCCACCAGGGCGAACCCAGCACCGCCTGTATACCAGACTCTGTGCCAGGCACTGAACGTAAATAAAAGCCTTACCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545687.5
CDS-3UTR CAA 90 bp GCAGAGGCCCTGGAAGCAGCAAAAACGGGGCTGGATAAAGCTACTAATGGGAGGACTGCCAAAGGGTTGTaGATGTCAGGGTGGCGAGAG +
Preference number: 5 (lower is better)
Translates to: AEALEAAKTGLDKATNGRTAKGL*MSGWRE
Trigger: CTCTCGCCACCCTGACATCAACAACCCTTTGGCAGT...CCTCCCATTAGTAGCTTTATCCAGCCCCGTTTTTGCTGCTTCCAGGGCCTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp AGGTGTGCTCCAGCCCCACCAAGTCTTCTCCCTAAAGCTCCTGAGATCTTGGGGGTCTGCACCAGCTGTTaGCTGTGGTACTCTTTCAGC +
Preference number: 5 (lower is better)
Translates to: RCAPAPPSLLPKAPEILGVCTSC*LWYSFS
Trigger: GCTGAAAGAGTACCACAGCAAACAGCTGGTGCAGAC...CCCCAAGATCTCAGGAGCTTTAGGGAGAAGACTTGGTGGGGCTGGAGCACACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp AGTCACATATGTGGCTCACACTATTTCTGTGGGACAGCCCTGCCTCTAGCTAGGGGGGCTTCAGCCACTTaGTACGGCTTCCGCCACTTC +
Preference number: 5 (lower is better)
Translates to: SHICGSHYFCGTALPLARGASAT*YGFRHF
Trigger: GAAGTGGCGGAAGCCGTACAAAGTGGCTGAAGCCCC...CCTAGCTAGAGGCAGGGCTGTCCCACAGAAATAGTGTGAGCCACATATGTGACT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CAA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGGGGGCTTCAGCCACTTaGTACGGCTTCCGCCACTTC +
Preference number: 5 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRGASAT*YGFRHF
Trigger: GAAGTGGCGGAAGCCGTACAAAGTGGCTGAAGCCCC...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGCCCCATGGGGGCCTaGAAGGCAGAGGCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: YFTVRKMDPAMATDVPKISPMGA*KAEALE
Trigger: TTCCAGGGCCTCTGCCTTCAAGGCCCCCATGGGGCT...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp TCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAACCCAGGAAAGCTCCTGAGATCTaGGGGCTGGCTGGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: SEKWTQRWPQMCPRLEPRKAPEI*GLAGQA
Trigger: AGCCTGCCCAGCCAGCCCCAAGATCTCAGGAGCTTT...CCTGGGTTCTAATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTGGCACTGCCAAAGGGTaGTTGATGTCAGGGTGGCGA +
Preference number: 5 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFGTAKG*LMSGWR
Trigger: TCGCCACCCTGACATCAACAACCCTTTGGCAGTGCC...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTTGCCCAGGAACATGGTaGACATGGAACGCGGGGAAC +
Preference number: 5 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFCPGTW*TWNAGN
Trigger: GTTCCCCGCGTTCCATGTCAACCATGTTCCTGGGCA...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp AGCTGTTTGCTGTGGTACTCTTTCAGCAGCTCCTCCAGGGCCGCAGCATTCTCTGTCTGCACCAGCTGTTaGCTGTGGTACTCTTTCAGC +
Preference number: 5 (lower is better)
Translates to: SCLLWYSFSSSSRAAAFSVCTSC*LWYSFS
Trigger: GCTGAAAGAGTACCACAGCAAACAGCTGGTGCAGAC...AGAGAATGCTGCGGCCCTGGAGGAGCTGCTGAAAGAGTACCACAGCAAACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544075.5
CDS-3UTR CAA 90 bp GGCCCCATTCAAAGCCATATCCTGGGCCACATGCGGCCCTTGGGCCGGGTTGGAGAGCCCTTGAAATATTaGAGTTCCAATCAAGATGTG +
Preference number: 5 (lower is better)
Translates to: GPIQSHILGHMRPLGRVGEPLKY*SSNQDV
Trigger: CACATCTTGATTGGAACTCAAATATTTCAAGGGCTC...TCCAACCCGGCCCAAGGGCCGCATGTGGCCCAGGATATGGCTTTGAATGGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CAA 90 bp AGGAGGGGGACGCACATCTGCTCTAGGGCCCTGTACAGAGGCAAGGGTGTGGCTGTGGCTATGGAGCCCTaGAAATATTTGAGTTCCAAT +
Preference number: 5 (lower is better)
Translates to: RRGTHICSRALYRGKGVAVAMEP*KYLSSN
Trigger: ATTGGAACTCAAATATTTCAAGGGCTCCATAGCCAC...AGCCACACCCTTGCCTCTGTACAGGGCCCTAGAGCAGATGTGCGTCCCCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CAA 90 bp GACTTTCTGCTACCCCTTCCCTTTATAGACCTGCTGGAAGAGGAGGGGGACGCAGGTGACCACTATGTGTaGGTGCTCAGCCTTTGCACA +
Preference number: 5 (lower is better)
Translates to: DFLLPLPFIDLLEEEGDAGDHYV*VLSLCT
Trigger: TGTGCAAAGGCTGAGCACCAACACATAGTGGTCACC...TGCGTCCCCCTCCTCTTCCAGCAGGTCTATAAAGGGAAGGGGTAGCAGAAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS TCA 90 bp CTGCAAATGTGGGATCCAGGCTCAGAGAAGCCCATATCACCTTCATaGTTCAACACCAGTGCTTCCTGCACCCAACAGCCCGGGTGCATA +
Preference number: 5 (lower is better)
Translates to: LQMWDPGSEKPISPS*FNTSASCTQQPGCI
Trigger: TATGCACCCGGGCTGTTGGGTGCAGGAAGCACTGGTGTTGAATCATGAAGGTGATATGGGCTTCTCTGAGCCTGGATCCCACATTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539134.1
ENST00000545886.1
CDS-3UTR CAA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAAAGCTCCTGAGATCTaGGGGCTGGCTGGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: YFTVRKMDPAMATDVPKIKAPEI*GLAGQA
Trigger: AGCCTGCCCAGCCAGCCCCAAGATCTCAGGAGCTTT...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTAGAGTGTATCTCGAGTaGCCATGCCCACCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: YFTVRKMDPAMATDVPKIRVYLE*PCPPGP
Trigger: AGGCCCAGGTGGGCATGGCAACTCGAGATACACTCT...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTTGCCCAGGAACATGGTaGACATGGAACGCGGGGAAC +
Preference number: 5 (lower is better)
Translates to: YFTVRKMDPAMATDVPKICPGTW*TWNAGN
Trigger: GTTCCCCGCGTTCCATGTCAACCATGTTCCTGGGCA...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTTTCCGCTTGAGGAGGTaGCACACCAGGATGCCCAAC +
Preference number: 5 (lower is better)
Translates to: YFTVRKMDPAMATDVPKIFRLRR*HTRMPN
Trigger: GTTGGGCATCCTGGTGTGCAACCTCCTCAAGCGGAA...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp ACAGATGTGCCCAAGATTAGAACCCAGGGACTCACTCTCCTAGCCCAGGACTTTTCACCTCAGACACCATaGAACTTGTCCGCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: TDVPKIRTQGLTLLAQDFSPQTP*NLSAAQ
Trigger: CTGAGCAGCGGACAAGTTCAATGGTGTCTGAGGTGA...AAAGTCCTGGGCTAGGAGAGTGAGTCCCTGGGTTCTAATCTTGGGCACATCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTCCTCAGATGACCAGGTaGCTCTCACTTAGCCGGACC +
Preference number: 5 (lower is better)
Translates to: YFTVRKMDPAMATDVPKIPQMTR*LSLSRT
Trigger: GGTCCGGCTAAGTGAGAGCAACCTGGTCATCTGAGG...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp TATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGAGTTTCTCGTCTGCTGGGCCATaGCTTCTCGGTCCTCACAGT +
Preference number: 5 (lower is better)
Translates to: YSTHGRGWRHKDRAMVSFSSAGP*LLGPHS
Trigger: ACTGTGAGGACCGAGAAGCAATGGCCCAGCAGACGA...GAAACTCACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp AGGGCACAGAGAAAAGGAGCTCCTCGTGACAGCACTTTCCCACCTTTTATTATTCCTCAGATGACCAGGTaGCTCTCACTTAGCCGGACC +
Preference number: 5 (lower is better)
Translates to: RAQRKGAPRDSTFPPFIIPQMTR*LSLSRT
Trigger: GGTCCGGCTAAGTGAGAGCAACCTGGTCATCTGAGG...AATAATAAAAGGTGGGAAAGTGCTGTCACGAGGAGCTCCTTTTCTCTGTGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000064780.7
CDS-3UTR CAA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGGGCACTGCCAAAGGGTaGTTGATGTCAGGGTGGCGA +
Preference number: 5 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVGTAKG*LMSGWR
Trigger: TCGCCACCCTGACATCAACAACCCTTTGGCAGTGCC...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTTCACCTCAGACACCATaGAACTTGTCCGCTGCTCAG +
Preference number: 5 (lower is better)
Translates to: YFTVRKMDPAMATDVPKISPQTP*NLSAAQ
Trigger: CTGAGCAGCGGACAAGTTCAATGGTGTCTGAGGTGA...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS-3UTR CAA 90 bp TTTTATTATTCAACACATGGAAGGGGGTGGAGACACAAGGATAGGGCAATGGTGTCGTCTGCTGGGCCATaGCTTCTCGGTCCTCACAGT +
Preference number: 5 (lower is better)
Translates to: FYYSTHGRGWRHKDRAMVSSAGP*LLGPHS
Trigger: ACTGTGAGGACCGAGAAGCAATGGCCCAGCAGACGA...CACCATTGCCCTATCCTTGTGTCTCCACCCCCTTCCATGTGTTGAATAATAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS CCA 90 bp CACCCTACCCAGAACTCCCCAAATCTACAGCAAACTGCTATTCCATaGCCTCTCTACTGTGCCCTATGTAACAATTTAACTGAGTGCCCC +
Preference number: 5 (lower is better)
Translates to: HPTQNSPNLQQTAIP*PLYCALCNNLTECP
Trigger: GGGGCACTCAGTTAAATTGTTACATAGGGCACAGTAGAGAGGCCATGGAATAGCAGTTTGCTGTAGATTTGGGGAGTTCTGGGTAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539134.1
ENST00000545886.1
CDS-3UTR CAA 90 bp TACTTCACAGTCAGAAAAATGGACCCAGCGATGGCCACAGATGTGCCCAAGATTCAGACACCATTGAACTaGTCCGCTGCTCAGGAATTC +
Preference number: 5 (lower is better)
Translates to: YFTVRKMDPAMATDVPKIQTPLN*SAAQEF
Trigger: GAATTCCTGAGCAGCGGACAAGTTCAATGGTGTCTG...AATCTTGGGCACATCTGTGGCCATCGCTGGGTCCATTTTTCTGACTGTGAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS GCA 72 bp CACGCAGGGCCGGCCCGGAGTCGCGGCCGGAGGACCTaGAGGTCACGGGGCTCGGAGACTGGCGGTGGCCGG +
Preference number: 6 (lower is better)
Translates to: HAGPARSRGRRT*RSRGSETGGGR
Trigger: CCGGCCACCGCCAGTCTCCGAGCCCCGTGACCTGCAGGTCCTCCGGCCGCGACTCCGGGCCGGCCCTGCGTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393580.2
CDS CCA 72 bp CGGCCGGAGGACCTGCAGGTCACGGGGCTCGGAGACTaGCGGTGGCCGGTGCGCGGAAGGCGCCGGGACAGG +
Preference number: 6 (lower is better)
Translates to: RPEDLQVTGLGD*RWPVRGRRRDR
Trigger: CCTGTCCCGGCGCCTTCCGCGCACCGGCCACCGCCAGTCTCCGAGCCCCGTGACCTGCAGGTCCTCCGGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393580.2
CDS GCA 72 bp AGGCTGCCGTGTCTCACCACCGCTGCTGGCCCCTGCTaGCACCTCCACGCCACGTCGGGCCCGCCGCCCCCA +
Preference number: 6 (lower is better)
Translates to: RLPCLTTAAGPC*HLHATSGPPPP
Trigger: TGGGGGCGGCGGGCCCGACGTGGCGTGGAGGTGGCAGCAGGGGCCAGCAGCGGTGGTGAGACACGGCAGCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000545886.1
CDS GCA 72 bp GGGTGCCGTTCCCAGGCTGCCGTGTCTCACCACCGCTaGTGGCCCCTGCTGCCACCTCCACGCCACGTCGGG +
Preference number: 6 (lower is better)
Translates to: GCRSQAAVSHHR*WPLLPPPRHVG
Trigger: CCCGACGTGGCGTGGAGGTGGCAGCAGGGGCCAGCAGCGGTGGTGAGACACGGCAGCCTGGGAACGGCACCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000545886.1
CDS GCA 72 bp TCCTCTGGGCCACCTGCCCGGGTGCCGTTCCCAGGCTaGCGTGTCTCACCACCGCTGCTGGCCCCTGCTGCC +
Preference number: 6 (lower is better)
Translates to: SSGPPARVPFPG*RVSPPLLAPAA
Trigger: GGCAGCAGGGGCCAGCAGCGGTGGTGAGACACGGCAGCCTGGGAACGGCACCCGGGCAGGTGGCCCAGAGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000545886.1
CDS CCA 72 bp GCCGGCACAGCAGACTTGGCTTCATCCTCAGGCCCCTaGTGGTCGCCGGCCTGGCTGCGCCGCGGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: AGTADLASSSGP*WSPAWLRRGSS
Trigger: GGAGCTGCCGCGGCGCAGCCAGGCCGGCGACCACCAGGGGCCTGAGGATGAAGCCAAGTCTGCTGTGCCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000544075.5
CDS CCA 72 bp GCGGTGCGGGCAGATGTGTGGCACGTTCGGGGGCGCTaGCGGCAGCCTGCAGGGGGCACAGGCAGAAGTGGC +
Preference number: 6 (lower is better)
Translates to: AVRADVWHVRGR*RQPAGGTGRSG
Trigger: GCCACTTCTGCCTGTGCCCCCTGCAGGCTGCCGCCAGCGCCCCCGAACGTGCCACACATCTGCCCGCACCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000537771.1
CDS GCA 72 bp ACTGGGCGGCTGTCTCCTCTGGGCCACCTGCCCGGGTaGCGTTCCCAGGCTGCCGTGTCTCACCACCGCTGC +
Preference number: 6 (lower is better)
Translates to: TGRLSPLGHLPG*RSQAAVSHHRC
Trigger: GCAGCGGTGGTGAGACACGGCAGCCTGGGAACGGCACCCGGGCAGGTGGCCCAGAGGAGACAGCCGCCCAGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000545886.1
CDS GCA 72 bp CAGGCGGTGCTGGGTTCGCCCTGGTGGGAATCTGGCTaGGCCGCGGCAGCTCCAGCTCGGCTCCCCGTTCGA +
Preference number: 6 (lower is better)
Translates to: QAVLGSPWWESG*AAAAPARLPVR
Trigger: TCGAACGGGGAGCCGAGCTGGAGCTGCCGCGGCGCAGCCAGATTCCCACCAGGGCGAACCCAGCACCGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545687.5
CDS CCA 72 bp CACGGTGTGGAGATGGTGGCGGTGCGGGCAGATGTGTaGCACGTTCGGGGGCGCTGGCGGCAGCCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: HGVEMVAVRADV*HVRGRWRQPAG
Trigger: CCCTGCAGGCTGCCGCCAGCGCCCCCGAACGTGCCACACATCTGCCCGCACCGCCACCATCTCCACACCGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537771.1
CDS CCA 72 bp CCAGGCAGGATTCCGCTGGCAGCCCCCAAGTGGAGCTaGGGCTGGGCTCGTGCCCCCGTCCTTCCCACCTGG +
Preference number: 6 (lower is better)
Translates to: PGRIPLAAPKWS*GWARAPVLPTW
Trigger: CCAGGTGGGAAGGACGGGGGCACGAGCCCAGCCCCAGCTCCACTTGGGGGCTGCCAGCGGAATCCTGCCTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS CCA 72 bp CACGGTGTGGAGATGGTGGCGGTGCGGGCAGATGTGTaGCACGTTCGGGGGCGCTGGCGGCAGCTTGGACAC +
Preference number: 6 (lower is better)
Translates to: HGVEMVAVRADV*HVRGRWRQLGH
Trigger: GTGTCCAAGCTGCCGCCAGCGCCCCCGAACGTGCCACACATCTGCCCGCACCGCCACCATCTCCACACCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000539134.1
ENST00000545886.1
CDS CCA 72 bp CCAGAGAGCGAGGCCAGGCCCTGCACGGTGTGGAGATaGTGGCGGTGCGGGCAGATGTGTGGCACGTTCGGG +
Preference number: 6 (lower is better)
Translates to: PESEARPCTVWR*WRCGQMCGTFG
Trigger: CCCGAACGTGCCACACATCTGCCCGCACCGCCACCATCTCCACACCGTGCAGGGCCTGGCCTCGCTCTCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000537771.1
ENST00000539134.1
ENST00000545886.1
CDS CCA 72 bp TGGGCCTCCAGCCTCCTCCAAAGGCTGCAACGGGCATaGGGCTGGCATGGGCTGGAGCCCCATGCAGCTGAG +
Preference number: 6 (lower is better)
Translates to: WASSLLQRLQRA*GWHGLEPHAAE
Trigger: CTCAGCTGCATGGGGCTCCAGCCCATGCCAGCCCCATGCCCGTTGCAGCCTTTGGAGGAGGCTGGAGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000544075.5
ENST00000545687.5
CDS CCA 72 bp AGGCAGAAGACAGGGACGATGGCGATGACCGCGTACTaGGCGGCTGTCTCCTCTGGGCCACCTGCCCGGGTG +
Preference number: 6 (lower is better)
Translates to: RQKTGTMAMTAY*AAVSSGPPARV
Trigger: CACCCGGGCAGGTGGCCCAGAGGAGACAGCCGCCCAGTACGCGGTCATCGCCATCGTCCCTGTCTTCTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000545886.1
CDS TCA 72 bp CACCTCCACGCCACGTCGGGCCCGCCGCCCCCACTCTaGGCATCACAGACGATGGAGGCAGGACAAAAGCAG +
Preference number: 6 (lower is better)
Translates to: HLHATSGPPPPL*ASQTMEAGQKQ
Trigger: CTGCTTTTGTCCTGCCTCCATCGTCTGTGATGCTCAGAGTGGGGGCGGCGGGCCCGACGTGGCGTGGAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS GCA 72 bp CCTGGGTCCAGGTCGGGCTCCTCCCCAGGTGGGCACTaGCAAAGGGTTGTTGATGTCAGGGTGGCGAGAGGC +
Preference number: 6 (lower is better)
Translates to: PGSRSGSSPGGH*QRVVDVRVARG
Trigger: GCCTCTCGCCACCCTGACATCAACAACCCTTTGGCAGTGCCCACCTGGGGAGGAGCCCGACCTGGACCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000544075.5
ENST00000545687.5
CDS GCA 72 bp GCCCACAGACAAGATGGTGATCTCGCCCTGACGCCCTaGCTTGGCCCCGGCCTTGGGAACCCTGGTCGGGTT +
Preference number: 6 (lower is better)
Translates to: AHRQDGDLALTP*LGPGLGNPGRV
Trigger: AACCCGACCAGGGTTCCCAAGGCCGGGGCCAAGGCAGGGCGTCAGGGCGAGATCACCATCTTGTCTGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000537771.1
ENST00000539134.1
ENST00000545886.1
CDS GCA 72 bp TCCCCCTCCCGGCCCCCAGGCTGTCACGTCTTTACCTaGCCCTGCTGCATCTGTGCCCATCTCACCTGCCCA +
Preference number: 6 (lower is better)
Translates to: SPSRPPGCHVFT*PCCICAHLTCP
Trigger: TGGGCAGGTGAGATGGGCACAGATGCAGCAGGGGCAGGTAAAGACGTGACAGCCTGGGGGCCGGGAGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS CCA 72 bp GCCGGCACAGCAGACTTGGCTTCATCCTCAGGCCCCTaGTGGTCGCCGGCCTGGTCTCGGTCCAAGTTTCCC +
Preference number: 6 (lower is better)
Translates to: AGTADLASSSGP*WSPAWSRSKFP
Trigger: GGGAAACTTGGACCGAGACCAGGCCGGCGACCACCAGGGGCCTGAGGATGAAGCCAAGTCTGCTGTGCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393580.2
CDS CCA 72 bp CAGTGCCTGGCACAGAGTCTGGTATACAGGCGGTGCTaGGTTCGCCCTGGTGGGAATCTGGCTGCGCCGCGG +
Preference number: 6 (lower is better)
Translates to: QCLAQSLVYRRC*VRPGGNLAAPR
Trigger: CCGCGGCGCAGCCAGATTCCCACCAGGGCGAACCCAGCACCGCCTGTATACCAGACTCTGTGCCAGGCACTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545687.5
CDS CAA 72 bp GGTCGGGCTCCTCCCCAGGTGGGCACTGCCAAAGGGTaGTTGATGTCAGGGTGGCGAGAGGCCAGGGCAGCA +
Preference number: 6 (lower is better)
Translates to: GRAPPQVGTAKG*LMSGWREARAA
Trigger: TGCTGCCCTGGCCTCTCGCCACCCTGACATCAACAACCCTTTGGCAGTGCCCACCTGGGGAGGAGCCCGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000544075.5
ENST00000545687.5
CDS GCA 72 bp GAAGGCAGAGCAGGGCAAGACTCTGCCCACCGCGGCTaGCTCACAGGCTCCTGGAGGAAACCCTCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: EGRAGQDSAHRG*LTGSWRKPSSP
Trigger: AGGAGAGGAGGGTTTCCTCCAGGAGCCTGTGAGGCAGCCGCGGTGGGCAGAGTCTTGCCCTGCTCTGCCTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS CAA 90 bp CAGCCCGGGTGCATAGAGGCTTCAGGGCCACGTGAACTCCAGTCATaGAATTGGGCGGGCGAGGGGGCGGTGCGTCAGCGTCTTCTGGGT +
Preference number: 6 (lower is better)
Translates to: QPGCIEASGPRELQS*NWAGEGAVRQRLLG
Trigger: ACCCAGAAGACGCTGACGCACCGCCCCCTCGCCCGCCCAATTCAATGACTGGAGTTCACGTGGCCCTGAAGCCTCTATGCACCCGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539134.1
ENST00000545886.1
CDS TCA 72 bp CCTCCTTGTGCGCCGTGCAGTGGTAGCCCTTCCGCTTaGGGAGGTTGCACACCAGGATGCCCAACAGCCCCA +
Preference number: 6 (lower is better)
Translates to: PPCAPCSGSPSA*GGCTPGCPTAP
Trigger: TGGGGCTGTTGGGCATCCTGGTGTGCAACCTCCTCAAGCGGAAGGGCTACCACTGCACGGCGCACAAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000545886.1
CDS TCA 72 bp CCAACAGCCCGGGTGCATAGAGGCTTCAGGGCCACGTaGACTCCAGTCATTGAATTGGGCGGGCGAGGGGGC +
Preference number: 6 (lower is better)
Translates to: PTARVHRGFRAT*TPVIELGGRGG
Trigger: GCCCCCTCGCCCGCCCAATTCAATGACTGGAGTTCACGTGGCCCTGAAGCCTCTATGCACCCGGGCTGTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000539134.1
ENST00000545886.1
CDS GCA 72 bp GTTCAGTGCCTGGCACAGAGTCTGGTATACAGGCGGTaGTGGGTTCGCCCTGGTGGGAATCTGGCTGCGCCG +
Preference number: 6 (lower is better)
Translates to: VQCLAQSLVYRR*WVRPGGNLAAP
Trigger: CGGCGCAGCCAGATTCCCACCAGGGCGAACCCAGCACCGCCTGTATACCAGACTCTGTGCCAGGCACTGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545687.5
CDS CCA 72 bp GCCAATGTGCCCAGGGGAGCCCACTCCCCGCCATGCTaGGGATGCAAAGGTCAACCCACTGCCCTCCTGTTT +
Preference number: 6 (lower is better)
Translates to: ANVPRGAHSPPC*GCKGQPTALLF
Trigger: AAACAGGAGGGCAGTGGGTTGACCTTTGCATCCCCAGCATGGCGGGGAGTGGGCTCCCCTGGGCACATTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS CAA 90 bp AGCGGTTCTCCTCGGCCTTGTTCTCTGCTGGGGGCTTCAGCCACTTaGTACGGCTTCCGCCACTTCCTAGCAGGGCCTGCTGCTCAGGGG +
Preference number: 6 (lower is better)
Translates to: SGSPRPCSLLGASAT*YGFRHFLAGPAAQG
Trigger: CCCCTGAGCAGCAGGCCCTGCTAGGAAGTGGCGGAAGCCGTACAAAGTGGCTGAAGCCCCCAGCAGAGAACAAGGCCGAGGAGAACCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000539134.1
ENST00000545886.1
CDS TCA 72 bp CCGAGGGTGCTAGCATGGGAGATGCCATTTCACTCTTaGGGTAGCCACAGGCTCCCATGGGCCCAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: PRVLAWEMPFHS*GSHRLPWAQGR
Trigger: CCTGCCCTGGGCCCATGGGAGCCTGTGGCTACCTCAAGAGTGAAATGGCATCTCCCATGCTAGCACCCTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS TCA 72 bp GGTCACACAGCAAGTTCATGGACCAGAGCCTTAGCCTaGGAGGCCCGGGTGCCATGGGGGCCAAGATGCTGC +
Preference number: 6 (lower is better)
Translates to: GHTASSWTRALA*EARVPWGPRCC
Trigger: GCAGCATCTTGGCCCCCATGGCACCCGGGCCTCTCAGGCTAAGGCTCTGGTCCATGAACTTGCTGTGTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS GCA 72 bp CCGGACCACATAGCGGTTCTCCTCGGCCTTGTTCTCTaGTGGGGGCTTCAGCCACTTTGTACGGCTTCCGCC +
Preference number: 6 (lower is better)
Translates to: PDHIAVLLGLVL*WGLQPLCTASA
Trigger: GGCGGAAGCCGTACAAAGTGGCTGAAGCCCCCAGCAGAGAACAAGGCCGAGGAGAACCGCTATGTGGTCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000539134.1
ENST00000545886.1
CDS GCA 72 bp GATCCACTGAAGCCACTTGACCAGCTGTGCCACCTCTaGTCTGCCCCCACGGCCACACCTTCGTCCCCTTAC +
Preference number: 6 (lower is better)
Translates to: DPLKPLDQLCHL*SAPTATPSSPY
Trigger: GTAAGGGGACGAAGGTGTGGCCGTGGGGGCAGAGCAGAGGTGGCACAGCTGGTCAAGTGGCTTCAGTGGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS GCA 72 bp CGCCGGCCTGGGGATACAAAGTATGGGGTGCAGTCCTaGTCTGCTCTGTCTTGCACTGGCTCTGTGGCCTGC +
Preference number: 6 (lower is better)
Translates to: RRPGDTKYGVQS*SALSCTGSVAC
Trigger: GCAGGCCACAGAGCCAGTGCAAGACAGAGCAGAGCAGGACTGCACCCCATACTTTGTATCCCCAGGCCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545687.5
CDS CAA 72 bp CCTCGGCCTTGTTCTCTGCTGGGGGCTTCAGCCACTTaGTACGGCTTCCGCCACTTCCTAGCAGGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: PRPCSLLGASAT*YGFRHFLAGPA
Trigger: AGCAGGCCCTGCTAGGAAGTGGCGGAAGCCGTACAAAGTGGCTGAAGCCCCCAGCAGAGAACAAGGCCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000539134.1
ENST00000545886.1
CDS TCA 72 bp GCCCCTAGTCAGCTTTGGGCCCAAATCTCAAGGGTGTaGGAATGGGCCACGATGATCAGCCCTGGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: APSQLWAQISRV*EWATMISPGPS
Trigger: GCTGGGCCCAGGGCTGATCATCGTGGCCCATTCTCACACCCTTGAGATTTGGGCCCAAAGCTGACTAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539134.1
ENST00000545886.1
CDS GCA 72 bp CCGCCCCCACTCATCACAGCCATGAGTACCCAGAGGTaGCCAGGAACATGGTTGACATGGAACGCGGGGAAC +
Preference number: 6 (lower is better)
Translates to: PPPLITAMSTQR*PGTWLTWNAGN
Trigger: GTTCCCCGCGTTCCATGTCAACCATGTTCCTGGGCACCTCTGGGTACTCATGGCTGTGATGAGTGGGGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000064780.7
ENST00000393580.2
CDS CCA 72 bp CATTCTCTGTGGGTAGCTGCAGTCAGACCCTCACTGTaGCCATATGGGACACACCTCCCACCCCCTGCCCCA +
Preference number: 6 (lower is better)
Translates to: HSLWVAAVRPSL*PYGTHLPPPAP
Trigger: TGGGGCAGGGGGTGGGAGGTGTGTCCCATATGGCCACAGTGAGGGTCTGACTGCAGCTACCCACAGAGAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS TCA 72 bp GGGCTCCATGTGAGACACAACATAACCGGAAAGTCCTaGTCTCTCTGGCCGCCTCCACTGCCCAGAGAGGCC +
Preference number: 6 (lower is better)
Translates to: GLHVRHNITGKS*SLWPPPLPREA
Trigger: GGCCTCTCTGGGCAGTGGAGGCGGCCAGAGAGATCAGGACTTTCCGGTTATGTTGTGTCTCACATGGAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS GCA 72 bp TTTCCTCCTGCCGGCTTACTGCTCCTGTCCGCTTCCTaGCCCCGCCAGACTTCAGTGTCAGGACTTAGAAGG +
Preference number: 6 (lower is better)
Translates to: FPPAGLLLLSAS*PRQTSVSGLRR
Trigger: CCTTCTAAGTCCTGACACTGAAGTCTGGCGGGGGCAGGAAGCGGACAGGAGCAGTAAGCCGGCAGGAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS GCA 72 bp AGCTCCTCCAGGGCCGCAGCATTCTCTGTGGGTAGCTaGAGTCAGACCCTCACTGTGGCCATATGGGACACA +
Preference number: 6 (lower is better)
Translates to: SSSRAAAFSVGS*SQTLTVAIWDT
Trigger: TGTGTCCCATATGGCCACAGTGAGGGTCTGACTGCAGCTACCCACAGAGAATGCTGCGGCCCTGGAGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS CCA 72 bp GACCACATAGCGGTTCTCCTCGGCCTTGTTCTCTGCTaGGGGCTTCAGCCACTTTGTACGGCTTCCGCCACT +
Preference number: 6 (lower is better)
Translates to: DHIAVLLGLVLC*GLQPLCTASAT
Trigger: AGTGGCGGAAGCCGTACAAAGTGGCTGAAGCCCCCAGCAGAGAACAAGGCCGAGGAGAACCGCTATGTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000539134.1
ENST00000545886.1
CDS CCA 72 bp CTCAAGGGTGTGAGAATGGGCCACGATGATCAGCCCTaGGCCCAGCAGCAAACAGAGCTCCCAGGACTTGCA +
Preference number: 6 (lower is better)
Translates to: LKGVRMGHDDQP*AQQQTELPGLA
Trigger: TGCAAGTCCTGGGAGCTCTGTTTGCTGCTGGGCCCAGGGCTGATCATCGTGGCCCATTCTCACACCCTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000539134.1
ENST00000545886.1
CDS CCA 72 bp GGTCTGCACTGTCTCCTCCTCAGCCTCAAGGAGCTGTaGGCTGCCACCCTACCCAGAACTCCCCAAATCTAC +
Preference number: 6 (lower is better)
Translates to: GLHCLLLSLKEL*AATLPRTPQIY
Trigger: GTAGATTTGGGGAGTTCTGGGTAGGGTGGCAGCCCACAGCTCCTTGAGGCTGAGGAGGAGACAGTGCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000539134.1
ENST00000545886.1
CDS CAA 90 bp CCACAGGGCACTCCTGCTACTCCAGGCCAGAGGTCAGAGGTCACCTaGAGTAACTCCAAGGCCACCATCCGACCCTGGAACCATACACAC +
Preference number: 6 (lower is better)
Translates to: PQGTPATPGQRSEVT*SNSKATIRPWNHTH
Trigger: GTGTGTATGGTTCCAGGGTCGGATGGTGGCCTTGGAGTTACTCAAGGTGACCTCTGACCTCTGGCCTGGAGTAGCAGGAGTGCCCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS TCA 72 bp CCCAGCCTCCGTGATGGTCTTCACCTCAGACACCATTaGACTTGTCCGCTGCTCAGGAATTCGAGCCACGCG +
Preference number: 6 (lower is better)
Translates to: PSLRDGLHLRHH*TCPLLRNSSHA
Trigger: CGCGTGGCTCGAATTCCTGAGCAGCGGACAAGTTCAATGGTGTCTGAGGTGAAGACCATCACGGAGGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000539134.1
ENST00000545886.1
CDS TCA 72 bp AGTCAGGGAGATCACCCCACGAGGGCCCAGCCTCCGTaGTGGTCTTCACCTCAGACACCATTGAACTTGTCC +
Preference number: 6 (lower is better)
Translates to: SQGDHPTRAQPP*WSSPQTPLNLS
Trigger: GGACAAGTTCAATGGTGTCTGAGGTGAAGACCATCACGGAGGCTGGGCCCTCGTGGGGTGATCTCCCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000539134.1
ENST00000545886.1
CDS TCA 72 bp ACATCTGGGCAAGGCTTCACCCAGGGTAGGATCCACTaGAGCCACTTGACCAGCTGTGCCACCTCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: TSGQGFTQGRIH*SHLTSCATSAL
Trigger: CAGAGCAGAGGTGGCACAGCTGGTCAAGTGGCTTCAGTGGATCCTACCCTGGGTGAAGCCTTGCCCAGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS CCA 72 bp GGCCACCATCCGACCCTGGAACCATACACACAACTGTaGCCTCCAAAGAGTCCAGATCCCCACATCTGGGCA +
Preference number: 6 (lower is better)
Translates to: GHHPTLEPYTQL*PPKSPDPHIWA
Trigger: TGCCCAGATGTGGGGATCTGGACTCTTTGGAGGCCACAGTTGTGTGTATGGTTCCAGGGTCGGATGGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS CCA 72 bp CCTCCGGTTCCAGGCCTTGTAACTCAAACTACAGCCTaGAACCAAAACCCGAGCCCCTTATGGTGCCTGCCC +
Preference number: 6 (lower is better)
Translates to: PPVPGLVTQTTA*NQNPSPLWCLP
Trigger: GGGCAGGCACCATAAGGGGCTCGGGTTTTGGTTCCAGGCTGTAGTTTGAGTTACAAGGCCTGGAACCGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS CAA 72 bp ACTCCTGCTACTCCAGGCCAGAGGTCAGAGGTCACCTaGAGTAACTCCAAGGCCACCATCCGACCCTGGAAC +
Preference number: 6 (lower is better)
Translates to: TPATPGQRSEVT*SNSKATIRPWN
Trigger: GTTCCAGGGTCGGATGGTGGCCTTGGAGTTACTCAAGGTGACCTCTGACCTCTGGCCTGGAGTAGCAGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS GCA 72 bp ATGGTCTTCACCTCAGACACCATTGAACTTGTCCGCTaGTCAGGAATTCGAGCCACGCGGAACCTGCCCACA +
Preference number: 6 (lower is better)
Translates to: MVFTSDTIELVR*SGIRATRNLPT
Trigger: TGTGGGCAGGTTCCGCGTGGCTCGAATTCCTGAGCAGCGGACAAGTTCAATGGTGTCTGAGGTGAAGACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000064780.7
ENST00000393580.2
ENST00000539134.1
CDS GCA 72 bp CTTCGTCCCCTTACCTTTCCTCCCATGTTGTCAGTCTaGAGCTATCACCTCCCAAGCCTCTCCCTCTCAGAC +
Preference number: 6 (lower is better)
Translates to: LRPLTFPPMLSV*SYHLPSLSLSD
Trigger: GTCTGAGAGGGAGAGGCTTGGGAGGTGATAGCTGCAGACTGACAACATGGGAGGAAAGGTAAGGGGACGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS GCA 72 bp TCCTGCTCTGCTCTGTCTTGCACTGGCTCTGTGGCCTaGCTGCAGAGGGCTGTGGTAAGGCTTTTATTTACG +
Preference number: 6 (lower is better)
Translates to: SCSALSCTGSVA*LQRAVVRLLFT
Trigger: CGTAAATAAAAGCCTTACCACAGCCCTCTGCAGGCAGGCCACAGAGCCAGTGCAAGACAGAGCAGAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545687.5
CDS CCA 72 bp AGGCTTTTATTTACGTTCAGTGCCTGGCACAGAGTCTaGTATACAGGCGGTGCTGGGTTCGCCCTGGTGGGA +
Preference number: 6 (lower is better)
Translates to: RLLFTFSAWHRV*YTGGAGFALVG
Trigger: TCCCACCAGGGCGAACCCAGCACCGCCTGTATACCAGACTCTGTGCCAGGCACTGAACGTAAATAAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545687.5
CDS CCA 72 bp GTCACCTTGAGTAACTCCAAGGCCACCATCCGACCCTaGAACCATACACACAACTGTGGCCTCCAAAGAGTC +
Preference number: 6 (lower is better)
Translates to: VTLSNSKATIRP*NHTHNCGLQRV
Trigger: GACTCTTTGGAGGCCACAGTTGTGTGTATGGTTCCAGGGTCGGATGGTGGCCTTGGAGTTACTCAAGGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000545886.1
CDS CCA 72 bp AGGGCTGTGGTAAGGCTTTTATTTACGTTCAGTGCCTaGCACAGAGTCTGGTATACAGGCGGTGCTGGGTTC +
Preference number: 6 (lower is better)
Translates to: RAVVRLLFTFSA*HRVWYTGGAGF
Trigger: GAACCCAGCACCGCCTGTATACCAGACTCTGTGCCAGGCACTGAACGTAAATAAAAGCCTTACCACAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000545687.5