RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RELN (Homo sapiens)

Ensembl gene IDs: ENSG00000189056

Ensembl transcript IDs: ENST00000343529.9, ENST00000424685.3, ENST00000428762.6, ENST00000429186.2, ENST00000473457.2, ENST00000473945.1, ENST00000478148.2, ENST00000679371.1, ENST00000679689.1, ENST00000679867.1, ENST00000679952.1, ENST00000680248.1, ENST00000680706.1, ENST00000680712.1, ENST00000681034.1, ENST00000681182.1, ENST00000681199.1, ENST00000681315.1, ENST00000681364.1, ENST00000681401.1, ENST00000681921.1, ENST00000681931.1

Found 2230 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTaGGAAGGGCTTTCAGGTAATCACCAAGTCCTTCACAGATATTTC +
Preference number: 1 (lower is better)
Translates to: LVISSQCGKVVYTRS*EGLSGNHQVLHRYF
Trigger: GAAATATCTGTGAAGGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR TCA 90 bp AGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTTATaGGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTG +
Preference number: 1 (lower is better)
Translates to: RSQLSRTHQHEDIYL*ANKSLVISSQCGKV
Trigger: CACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR TCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGTGTACACTCGGTCTTaGGAAGGGCTTTCAGGTAAT +
Preference number: 2 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLVYTRS*EGLSGN
Trigger: ATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACAC...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR TCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATGTGTACACTCGGTCTTaGGAAGGGCTTTCAGGTAAT +
Preference number: 2 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNVYTRS*EGLSGN
Trigger: ATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACAC...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR TCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACGTGTACACTCGGTCTTaGGAAGGGCTTTCAGGTAAT +
Preference number: 2 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHVYTRS*EGLSGN
Trigger: ATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACAC...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR CCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGATGGGAACTTATTTGTaGGAGATAGGGTCTTCATCC +
Preference number: 2 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRMGTYL*EIGSSS
Trigger: GGATGAAGACCCTATCTCCCACAAATAAGTTCCCAT...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR CCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGTGGGCTTTTATAGCTTaGTTCACCCTAGAGTGCAAC +
Preference number: 2 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKWAFIA*FTLECN
Trigger: GTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCA...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR GCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCTGGTTCACCCTAGAGTaGAACCTTTCAGTTACACAA +
Preference number: 2 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSWFTLE*NLSVTQ
Trigger: TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCA...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR TCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTGTGTACACTCGGTCTTaGGAAGGGCTTTCAGGTAAT +
Preference number: 2 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPVYTRS*EGLSGN
Trigger: ATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACAC...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR TCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGGTGTACACTCGGTCTTaGGAAGGGCTTTCAGGTAAT +
Preference number: 2 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWVYTRS*EGLSGN
Trigger: ATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACAC...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR TCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACTTTGCGAGTGCTGAGTaGCAATATATCCATATGTGG +
Preference number: 2 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHFASAE*QYIHMW
Trigger: CCACATATGGATATATTGTCACTCAGCACTCGCAAA...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429186.2
3UTR-3UTR GCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTGGTTCACCCTAGAGTaGAACCTTTCAGTTACACAA +
Preference number: 2 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNWFTLE*NLSVTQ
Trigger: TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCA...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR GCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAATGGTTCACCCTAGAGTaGAACCTTTCAGTTACACAA +
Preference number: 2 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKWFTLE*NLSVTQ
Trigger: TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCA...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR CCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACATGGGAACTTATTTGTaGGAGATAGGGTCTTCATCC +
Preference number: 2 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHMGTYL*EIGSSS
Trigger: GGATGAAGACCCTATCTCCCACAAATAAGTTCCCAT...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR CAA 90 bp GGACACATCAACATGAAGACATTTACTTATGAGCAAATAAGTCACTaGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTT +
Preference number: 2 (lower is better)
Translates to: GHINMKTFTYEQISH*SLVHSVGKWCTLGL
Trigger: AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAATGTCTTCATGTTGATGTGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR CAA 90 bp TTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTaGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCG +
Preference number: 2 (lower is better)
Translates to: FSYTNSIQSYRAIIM*LVLYNFIRRYEYDP
Trigger: CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR TCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACTACTGCCACTGTAACTaGTATTACAACAGATCACAA +
Preference number: 2 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYYCHCN*YYNRSQ
Trigger: TTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTA...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR TCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGTACTGCCACTGTAACTaGTATTACAACAGATCACAA +
Preference number: 2 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKYCHCN*YYNRSQ
Trigger: TTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTA...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR TCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGAGCCCATGTTGTCGTaGAAAATTCATCATGTAATT +
Preference number: 2 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKEPMLS*KIHHVI
Trigger: AATTACATGATGAATTTTTCACGACAACATGGGCTC...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424685.3
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR TCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTGTTGTAGAAATGTCTaGGCCCATGTTGTCGTGAAA +
Preference number: 2 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFICCRNV*AHVVVK
Trigger: TTTCACGACAACATGGGCTCAGACATTTCTACAACA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424685.3
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTTGGGCTTTTATAGCTTaGTTCACCCTAGAGTGCAAC +
Preference number: 2 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIWAFIA*FTLECN
Trigger: GTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCA...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR TCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTACTGCCACTGTAACTaGTATTACAACAGATCACAA +
Preference number: 2 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNYCHCN*YYNRSQ
Trigger: TTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTA...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR TCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATTTTGTTTGCGAGTGCTaGGTGACAATATATCCATAT +
Preference number: 2 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNFVCEC*VTIYPY
Trigger: ATATGGATATATTGTCACTCAGCACTCGCAAACAAA...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000429186.2
3UTR-3UTR CCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTATGGGAACTTATTTGTaGGAGATAGGGTCTTCATCC +
Preference number: 2 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPMGTYL*EIGSSS
Trigger: GGATGAAGACCCTATCTCCCACAAATAAGTTCCCAT...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR TCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAGAGCCCATGTTGTCGTaGAAAATTCATCATGTAATT +
Preference number: 2 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTEPMLS*KIHHVI
Trigger: AATTACATGATGAATTTTTCACGACAACATGGGCTC...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424685.3
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR TCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTTGTTGTAGAAATGTCTaGGCCCATGTTGTCGTGAAA +
Preference number: 2 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCACCRNV*AHVVVK
Trigger: TTTCACGACAACATGGGCTCAGACATTTCTACAACA...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424685.3
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR TCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGGAGCCCATGTTGTCGTaGAAAATTCATCATGTAATT +
Preference number: 2 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPEPMLS*KIHHVI
Trigger: AATTACATGATGAATTTTTCACGACAACATGGGCTC...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424685.3
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR CCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTTGTGGCATCAATATGTaGTTTATGAGAGTGAGCCTA +
Preference number: 2 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCACGINM*FMRVSL
Trigger: TAGGCTCACTCTCATAAACCACATATTGATGCCACA...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429186.2
3UTR TCA 72 bp AGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTaGGAAGGGCTTTCAGGTAATCACCAAGTCCTTCAC +
Preference number: 3 (lower is better)
Translates to: SSQCGKVVYTRS*EGLSGNHQVLH
Trigger: GTGAAGGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACTGTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR CAA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACATGGGCTTTTATAGCTaGGTTCACCCTAGAGTGCAA +
Preference number: 3 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYMGFYS*VHPRVQ
Trigger: TTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR CAA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACGAAATGGGAACTTATTaGTGGGAGATAGGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHEMGTY*WEIGSS
Trigger: TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTC...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR CAA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATAATGTTGCTGGTGTaGTACAACTTCATCAGAAGG +
Preference number: 3 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSIMLLV*YNFIRR
Trigger: CCTTCTGATGAAGTTGTACAACACCAGCAACATTAT...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR TCA 72 bp AATAAACTTTTTGATTCTTCATGGGTATCGCCTAAGTaGCCTTCGTCTTCTGTTGTAGAAATGTCTGAGCCC +
Preference number: 3 (lower is better)
Translates to: NKLFDSSWVSPK*PSSSVVEMSEP
Trigger: GGGCTCAGACATTTCTACAACAGAAGACGAAGGTCACTTAGGCGATACCCATGAAGAATCAAAAAGTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424685.3
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR CAA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGGAAATGGGAACTTATTaGTGGGAGATAGGGTCTTCA +
Preference number: 3 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPEMGTY*WEIGSS
Trigger: TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTC...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR-3UTR CAA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAATAATGTTGCTGGTGTaGTACAACTTCATCAGAAGG +
Preference number: 3 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEIMLLV*YNFIRR
Trigger: CCTTCTGATGAAGTTGTACAACACCAGCAACATTAT...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR TCA 72 bp CTTTCACGGACACATCAACATGAAGACATTTACTTATaGGCAAATAAGTCACTTGTCATTAGTTCACAGTGT +
Preference number: 3 (lower is better)
Translates to: LSRTHQHEDIYL*ANKSLVISSQC
Trigger: ACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAATGTCTTCATGTTGATGTGTCCGTGAAAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR CCA 72 bp CTGAGTGACAATATATCCATATGTGGCATCAATATGTaGTTTATGAGAGTGAGCCTATCAGTATATTTCAAA +
Preference number: 3 (lower is better)
Translates to: LSDNISICGINM*FMRVSLSVYFK
Trigger: TTTGAAATATACTGATAGGCTCACTCTCATAAACCACATATTGATGCCACATATGGATATATTGTCACTCAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429186.2
CDS-3UTR CCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCGGGGAGCGCTCATGCTaGGGTACTGGGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITGERSC*GTGALL
Trigger: CAGCAGCGCCCCAGTACCCCAGCATGAGCGCTCCCC...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCTTGTCCAGTGCCCACTaGGCACGCTCCACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITLSSAH*ARSTPE
Trigger: CTCTGGGGTGGAGCGTGCTCAGTGGGCACTGGACAA...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCGCCACCAGCGGAACCTaGTGCAAGGGGTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSATSGT*CKGSWQ
Trigger: CTGCCAAGACCCCTTGCACCAGGTTCCGCTGGTGGC...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCACTCCTTCACCAGGCTaGTCAGGGGCTCTGCACGTG +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITTPSPG*SGALHV
Trigger: CACGTGCAGAGCCCCTGATCAGCCTGGTGAAGGAGT...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCGTCATAGTCCTCCCCTaGGAACACGGGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITVIVLP*EHGLPP
Trigger: TGGTGGCAGCCCGTGTTCTCAGGGGAGGACTATGAC...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCGCCCTGCATGGTTCCTaGGTAGTAGGTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSALHGS*VVGAAG
Trigger: CCCAGCAGCACCTACTACGCAGGAACCATGCAGGGC...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGACACGGGCATCTTGGTaGCTCCTGGGTGAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKTRASW*LLGEAA
Trigger: GGCTGCTTCACCCAGGAGGCACCAAGATGCCCGTGT...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGAGCTCTCGTCGCAGATaGAGATGGCACCGGTCGTGC +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKSSRRR*RWHRSC
Trigger: GCACGACCGGTGCCATCTGCATCTGCGACGAGAGCT...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCGCCCGCTGCAGAGCTTaGGGCAAGCCTCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSARCRA*GKPLQC
Trigger: ACATTGGAGAGGCTTGCCCCAAGCTCTGCAGCGGGC...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCCTGGGTGGCATTCAGTaGCTTGGTACCCCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITLGGIQ*LGTPGH
Trigger: GTGACCAGGGGTACCAAGGCACTGAATGCCACCCAG...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGCGCAGTTTCCCTGGATaGATCTCCCATGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKRSFPG*ISHGHC
Trigger: GCAGTGGCCATGGGAGATGCATCCAGGGAAACTGCG...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAAGATGGCACCGGTCGTaGAGTATCCGTGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPRWHRS*SIRARC
Trigger: GCAGCGGGCACGGATACTGCACGACCGGTGCCATCT...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGCCTTCCAGCTCCCCGTaGTGGGTGCACAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKPSSSP*WVHRKK
Trigger: CTTTTTCCTGTGCACCCACCACGGGGAGCTGGAAGG...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCTCCAGCCCTGCATaGTTCCTGCGTAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKSSSPA*FLRSRC
Trigger: GCACCTACTACGCAGGAACCATGCAGGGCTGGAGGA...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGGCACGGGTTGACTCCTaGGGTCAGGAACGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKARVDS*GQERLY
Trigger: GTAAAGGCGTTCCTGACCCCAGGAGTCAACCCGTGC...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCGCACGGGTTGACTCCTaGGGTCAGGAACGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSARVDS*GQERLY
Trigger: GTAAAGGCGTTCCTGACCCCAGGAGTCAACCCGTGC...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCCAACCCCCACTGAAATaGAGAGCCATTCCCGACGCC +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITQPPLK*RAIPDA
Trigger: GGCGTCGGGAATGGCTCTCCATTTCAGTGGGGGTTG...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCACAGGCCGTCATGTCTTaGCTGCCACCAGCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPQAVMS*LPPAEA
Trigger: CGCTTCCGCTGGTGGCAGCCAAGACATGACGGCCTG...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGGGGAGCGCTCATGCTaGGGTACTGGGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLGERSC*GTGALL
Trigger: CAGCAGCGCCCCAGTACCCCAGCATGAGCGCTCCCC...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCCGTCGCAGATGCAGATaGCACCGGTCGTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITRRRCR*HRSCSI
Trigger: GATACTGCACGACCGGTGCCATCTGCATCTGCGACG...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAGCCTTGTCCACAGCGTaGGGGCCACTCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPALSTA*GPLRSL
Trigger: CAGTGACCTGAGTGGCCCCCACGCTGTGGACAAGGC...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCGCCGCCCATCTTTGTTaGAAACCAGGGCCTTACCAC +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSAAHLC*KPGPYH
Trigger: GTGGTAAGGCCCTGGTTTTCAACAAAGATGGGCGGC...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTGGCCTGAATCCATCTaGACCGGGTCCTGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKWPESI*TGSWEK
Trigger: TTTCTCCCAGGACCCGGTTCAGATGGATTCAGGCCA...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCATGGCCCAGTCGTTCTaGTCCAGGCCGTCATGTCTT +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITMAQSF*SRPSCL
Trigger: AAGACATGACGGCCTGGATCAGAACGACTGGGCCAT...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGCAGCAGAGCCTGAGATaGGGACATTGTCAATGGCCC +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKQQSLR*GHCQWP
Trigger: GGGCCATTGACAATGTCCTCATCTCAGGCTCTGCTG...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAGCTAGGAGGAAAGTCTaGCGGGCCCAGCCACTGCGC +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVARRKV*RAQPLR
Trigger: GCGCAGTGGCTGGGCCCGGCAGACTTTCCTCCTAGC...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCAATTCACACAGCCTGTaGCCGCAGGTGGAGCAATCC +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSNSHSL*PQVEQS
Trigger: GGATTGCTCCACCTGCGGGCACAGGCTGTGTGAATT...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCCAGGGGCTCTGCACGTaGTCAGAACAGATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITQGLCT*SEQICS
Trigger: GGAGCAAATCTGTTCTGAGCACGTGCAGAGCCCCTG...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCATGAGCCATGCCCACTaGACATGTTGGGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITMSHAH*TCWGTA
Trigger: AGCAGTGCCCCAACATGTGCAGTGGGCATGGCTCAT...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCATGAGCCATGCCCACTaGACATGTTGGGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSMSHAH*TCWGTA
Trigger: AGCAGTGCCCCAACATGTGCAGTGGGCATGGCTCAT...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGGGATGCCCCCATTGTTaGTGTACTGAAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKGCPHC*CTEGGR
Trigger: GCGTCCTCCTTCAGTACAGCAACAATGGGGGCATCC...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCATCTCTGCTAGCAGGTaGCACTGGATGCCCCCATTG +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSISASR*HWMPPL
Trigger: CAATGGGGGCATCCAGTGGCACCTGCTAGCAGAGAT...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCATCTCTGCTAGCAGGTaGCACTGGATGCCCCCATTG +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITISASR*HWMPPL
Trigger: CAATGGGGGCATCCAGTGGCACCTGCTAGCAGAGAT...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCTTCGCATCCTTTGCCTaGAGAAGCCGGGTAACAGCC +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITFASFA*RSRVTA
Trigger: GGCTGTTACCCGGCTTCTGCAGGCAAAGGATGCGAA...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGAGTCCCCATGGCCACTaGAGTAACTGGGACAAGGCT +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKSPHGH*SNWDKA
Trigger: AGCCTTGTCCCAGTTACTGCAGTGGCCATGGGGACT...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGCCATCGAAATGCCGTTaGAGGTGTCTTCGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKPSKCR*RCLRVL
Trigger: CAGGACGCGAAGACACCTGCAACGGCATTTCGATGG...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTCTGCGTAGTAGGTGCTaGTGGGGTGGTGCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAILRSRC*WGGARW
Trigger: CCACCGAGCACCACCCCAGCAGCACCTACTACGCAG...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTGACAGGGCCGGCATCTaGAGGGGAGCGCTCATGCTG +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSDRAGI*RGALML
Trigger: CAGCATGAGCGCTCCCCTGCAGATGCCGGCCCTGTC...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCCAGAGGCTTGGTAGCTaGTTGCCTGATCTGACAGCC +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSQRLGS*LPDLTA
Trigger: GGCTGTCAGATCAGGCAAGCAGCTACCAAGCCTCTG...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTGCTGGGCGATGACATaGCAGGTGATCCCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKCWAMT*QVIPLL
Trigger: CAACAACGGGATCACCTGGCATGTCATCGCCCAGCA...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCGTCTCCAGCGAATCCTaGTGTTCCGGGTTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSVSSES*CSGLVL
Trigger: CAGCACTAACCCGGAACACCAGGATTCGCTGGAGAC...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGGTGCCTTGGTACCCCTaGTCACACCTGCATATGCCA +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKVPWYP*SHLHMP
Trigger: TGGCATATGCAGGTGTGACCAGGGGTACCAAGGCAC...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTGGCATTCAGTGCCTTaGTACCCCTGGTCACACCTG +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKWHSVP*YPWSHL
Trigger: CAGGTGTGACCAGGGGTACCAAGGCACTGAATGCCA...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAACGTAGTAGGTGCTGCTaGGGTGGTGCTCGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQRSRCC*GGARWS
Trigger: GCTCCACCGAGCACCACCCCAGCAGCACCTACTACG...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAACAGGCCGTCATGTCTTaGCTGCCACCAGCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQQAVMS*LPPAEA
Trigger: CGCTTCCGCTGGTGGCAGCCAAGACATGACGGCCTG...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGGGGAGCGCTCATGCTaGGGTACTGGGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRGERSC*GTGALL
Trigger: CAGCAGCGCCCCAGTACCCCAGCATGAGCGCTCCCC...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCCTTCCTTCCGGCAGATaGGACGATGGCAAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITLPSGR*DDGKRS
Trigger: TGACCTCTTGCCATCGTCCCATCTGCCGGAAGGAAG...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTGCCTTGTCCACAGCGTaGGGGCCACTCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIALSTA*GPLRSL
Trigger: CAGTGACCTGAGTGGCCCCCACGCTGTGGACAAGGC...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTACTCCTTCACCAGGCTaGTCAGGGGCTCTGCACGTG +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAITPSPG*SGALHV
Trigger: CACGTGCAGAGCCCCTGATCAGCCTGGTGAAGGAGT...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCTATGCCATGATCGCATaGGCCATGCCCACTGCACAT +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITYAMIA*AMPTAH
Trigger: ATGTGCAGTGGGCATGGCTCATGCGATCATGGCATA...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCGTCAGGCTTGTTGCATaGAGCACTCTCTCCGCCTAT +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSVRLVA*STLSAY
Trigger: ATAGGCGGAGAGAGTGCTTCATGCAACAAGCCTGAC...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCTTGGTGCCTCCTGGGTaGAGCAGCCATTTCCTACTA +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITLVPPG*SSHFLL
Trigger: TAGTAGGAAATGGCTGCTTCACCCAGGAGGCACCAA...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCTGCTGGCCTTTTCAATaGAGACCAGGGCATCACCAG +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITCWPFQ*RPGHHQ
Trigger: CTGGTGATGCCCTGGTCTTCATTGAAAAGGCCAGCA...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCGTAGCAGTTTGGCCCTaGGTATCCCGGATCACAGAT +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITVAVWP*VSRITD
Trigger: ATCTGTGATCCGGGATACTCAGGGCCAAACTGCTAC...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGCCCAGTTTGCCTCGGTaGCTCTTGCGGACTCAAAAT +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKPSLPR*LLRTQN
Trigger: ATTTTGAGTCCGCAAGAGTCACCGAGGCAAACTGGG...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGGCCATTAAAGTACAGTaGGTCTCCATGGGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKAIKVQ*VSMGVG
Trigger: CCCTACGCCCATGGAGACTCACTGTACTTTAATGGC...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGCTCTCTGAGCTTGTGTaGAGTCCTTTGGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKLSELV*SPLAGA
Trigger: AGCACCAGCCAAAGGACTTCACACAAGCTCAGAGAG...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACGCTAGGAGGAAAGTCTaGCGGGCCCAGCCACTGCGC +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHARRKV*RAQPLR
Trigger: GCGCAGTGGCTGGGCCCGGCAGACTTTCCTCCTAGC...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCCGTAGTAGGTGGGGTTaGCCGCAATATGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSRSRWG*PQYAGK
Trigger: TTTCCCTGCATATTGCGGGCAACCCCACCTACTACG...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGGGAAGAAAAGCCAGTTaGCTGTGTCCACTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKGRKAS*LCPLGR
Trigger: TCGACCCAGTGGACACAGGCAACTGGCTTTTCTTCC...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGCCCCCAATAACTTCTTaGCAGTCAGACTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKPPITS*QSDSQP
Trigger: TGGCTGGGAGTCTGACTGGCAAGAAGTTATTGGGGG...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTACCAGCGGAACCTGGTaGAAGGGGTCTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAITSGTW*KGSWQQ
Trigger: CTGCTGCCAAGACCCCTTGCACCAGGTTCCGCTGGT...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTCCTGAGAACACGGGCTaGCACCAGCGGAACCTGGTG +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSPENTG*HQRNLV
Trigger: CACCAGGTTCCGCTGGTGGCAGCCCGTGTTCTCAGG...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCTTGCCACCATCGAAATaGCGTTGCAGGTGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSLPPSK*RCRCLR
Trigger: GCGAAGACACCTGCAACGGCATTTCGATGGTGGCAA...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCCAGATTCCCCCTCTCTaGACCATACACTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITQIPPL*TIHFRP
Trigger: TGGCCTGAAGTGTATGGTGCAGAGAGGGGGAATCTG...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTTTCCTGCGTAGTAGGTaGTGCTGGGGTGGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIFLRSR*CWGGAR
Trigger: CCGAGCACCACCCCAGCAGCACCTACTACGCAGGAA...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCCCAGGGCAATGTACCTaGCCACATTGCTGGAATTGC +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITPGQCT*PHCWNC
Trigger: GCAATTCCAGCAATGTGGGCAGGTACATTGCCCTGG...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGCCGTCATGTCTTGGCTaGCACCAGCGGAAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRPSCLG*HQRKRV
Trigger: CACTCGCTTCCGCTGGTGGCAGCCAAGACATGACGG...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCTGTTCTCACTACCGATaGGCCCCCAGTATTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITCSHYR*APSIAG
Trigger: TCCTGCAATACTGGGGGCGCATCGGTAGTGAGAACA...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCTGGGTCTGTACGAGCTaGCAGGAATCCGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSWVCTS*QESDLA
Trigger: TGCAAGATCGGATTCCTGGCAGCTCGTACAGACCCA...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTGTCGTGCAGTATCCGTaGCCGCTGCAGAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSVVQYP*PLQSLG
Trigger: CCCCAAGCTCTGCAGCGGGCACGGATACTGCACGAC...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGATGGCACCGGTCGTaGAGTATCCGTGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYRWHRS*SIRARC
Trigger: GCAGCGGGCACGGATACTGCACGACCGGTGCCATCT...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTAGATGGCACCGGTCGTaGAGTATCCGTGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLRWHRS*SIRARC
Trigger: GCAGCGGGCACGGATACTGCACGACCGGTGCCATCT...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCGCCACCAGCGGAACCTaGTGCAAGGGGTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSATSGT*CKGSWQ
Trigger: CTGCCAAGACCCCTTGCACCAGGTTCCGCTGGTGGC...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCTGTGAGCTGCTCTCCTaGATCCATCGGAATCTGGTC +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITCELLS*IHRNLV
Trigger: GACCAGATTCCGATGGATCCAGGAGAGCAGCTCACA...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGCGTAGTAGGTGCTGCTaGGGTGGTGCTCGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKRSRCC*GGARWS
Trigger: GCTCCACCGAGCACCACCCCAGCAGCACCTACTACG...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAACTCATGCTGGGGTACTaGGGCGCTGCTGAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQLMLGY*GAAEGV
Trigger: GACACCTTCAGCAGCGCCCCAGTACCCCAGCATGAG...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCCGCTGCAGAGCTTaGGGCAAGCCTCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRARCRA*GKPLQC
Trigger: ACATTGGAGAGGCTTGCCCCAAGCTCTGCAGCGGGC...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCGAGCAGTCATCACCTTaGAAGCTCTCGTCGCAGATG +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITEQSSP*KLSSQM
Trigger: CATCTGCGACGAGAGCTTCCAAGGTGATGACTGCTC...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTCAATATGCAGGGAAATaGGCACCTCGCCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIQYAGK*APRPAP
Trigger: GGGAGCAGGGCGAGGTGCTCATTTCCCTGCATATTG...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAAAGGCCGTGGTTGGTTaGGTACTCCAGCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPKAVVG*VLQLHL
Trigger: CAGGTGAAGCTGGAGTACTCAACCAACCACGGCCTT...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGTCATAGTCCTCCCCTaGGAACACGGGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLVIVLP*EHGLPP
Trigger: TGGTGGCAGCCCGTGTTCTCAGGGGAGGACTATGAC...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGGTTCCAGGAAGGACATaGAGTCCAACTCTCGAAGCA +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKVPGRT*SPTLEA
Trigger: TGCTTCGAGAGTTGGACTTCATGTCCTTCCTGGAAC...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCGTCGAGTTGTGTTGGTaGGGGCATCTTCAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSVELCW*GHLQEE
Trigger: TTCTTCCTGAAGATGCCCTCACCAACACAACTCGAC...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGATTGTCCAGTGCCCACTaGGCACGCTCCACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRLSSAH*ARSTPE
Trigger: CTCTGGGGTGGAGCGTGCTCAGTGGGCACTGGACAA...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTGGGAAGGTCGTGACTaGAAACAGAGCAGTCATCAC +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKWEGRD*KQSSHH
Trigger: GTGATGACTGCTCTGTTTTCAGTCACGACCTTCCCA...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACATGAGCACCTCGCCCTaGTCCCCATCCCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNMSTSP*SPSPSS
Trigger: GCTGGAAGGGGATGGGGAGCAGGGCGAGGTGCTCAT...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAGGACGCCCTCCTCTCTaGTGTCAGGCTTGTTGCATG +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQGRPPL*CQACCM
Trigger: CATGCAACAAGCCTGACAGCAGAGAGGAGGGCGTCC...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTACCAGCGGAACCTGGTaGAAGGGGTCTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSTSGTW*KGSWQQ
Trigger: CTGCTGCCAAGACCCCTTGCACCAGGTTCCGCTGGT...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAAGTCCCCATGGCCACTaGAGTAACTGGGACAAGGCT +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPSPHGH*SNWDKA
Trigger: AGCCTTGTCCCAGTTACTGCAGTGGCCATGGGGACT...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTGTGCTGCTGGGGTGGTaGTCGGTGGAGCATAAAGAG +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIVLLGW*SVEHKE
Trigger: CTCTTTATGCTCCACCGAGCACCACCCCAGCAGCAC...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAGCCCTGCATGGTTCCTaGGTAGTAGGTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVALHGS*VVGAAG
Trigger: CCCAGCAGCACCTACTACGCAGGAACCATGCAGGGC...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCACCATTCTCAGACGGTTaGCACCAGCGAAGGCGAGTA +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPPFSDG*HQRRRV
Trigger: TACTCGCCTTCGCTGGTGGCAACCGTCTGAGAATGG...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTACCGTCATGTCTTGGCTaGCACCAGCGGAAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVPSCLG*HQRKRV
Trigger: CACTCGCTTCCGCTGGTGGCAGCCAAGACATGACGG...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAGACAGGGCCGGCATCTaGAGGGGAGCGCTCATGCTG +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTDRAGI*RGALML
Trigger: CAGCATGAGCGCTCCCCTGCAGATGCCGGCCCTGTC...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTGACAGGGCCGGCATCTaGAGGGGAGCGCTCATGCTG +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIDRAGI*RGALML
Trigger: CAGCATGAGCGCTCCCCTGCAGATGCCGGCCCTGTC...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTAGCTCTCGTCGCAGATaGAGATGGCACCGGTCGTGC +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSSSRRR*RWHRSC
Trigger: GCACGACCGGTGCCATCTGCATCTGCGACGAGAGCT...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTTGTTGACGCTGTATTaGAGCAGCACTGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKLLTLY*SSTALS
Trigger: GGACAAGGCAGTGCTGCTGCAATACAGCGTCAACAA...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCACCATTGTGGCGTGGTTaGCACCAGCGCAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPPLWRG*HQRSKT
Trigger: AGTCTTACTGCGCTGGTGGCAACCACGCCACAATGG...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCGACCAGGAGCGCCCATaGTTGGTAGAAAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITDQERP*LVENSK
Trigger: CTTGGAATTTTCTACCAACCATGGGCGCTCCTGGTC...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGCTGGTTGTCCATGTGTaGGGTGTATTTCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKLVVHV*GVFLAT
Trigger: TGTGGCCAGAAATACACCCCACACATGGACAACCAG...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATGCCAGGTAAGGCCGTaGTTGGTTGAGTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPCQVRP*LVEYSS
Trigger: GCTGGAGTACTCAACCAACCACGGCCTTACCTGGCA...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATGCCACCAGCGGAACCTaGTGCAAGGGGTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNATSGT*CKGSWQ
Trigger: CTGCCAAGACCCCTTGCACCAGGTTCCGCTGGTGGC...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCCCCCTGTGTGATACATaGTGGGCTCACTTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSPLCDT*WAHLVL
Trigger: GAGAACTAAGTGAGCCCACCATGTATCACACAGGGG...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATACAGGCCGTCATGTCTTaGCTGCCACCAGCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIQAVMS*LPPAEA
Trigger: CGCTTCCGCTGGTGGCAGCCAAGACATGACGGCCTG...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGAGCATAACGGTCCTTTaGTCAGCAGAGCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKSITVL*SAEPEM
Trigger: CATCTCAGGCTCTGCTGACCAAAGGACCGTTATGCT...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGCTCATGCTGGGGTACTaGGGCGCTGCTGAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKLMLGY*GAAEGV
Trigger: GACACCTTCAGCAGCGCCCCAGTACCCCAGCATGAG...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTACTCATGCTGGGGTACTaGGGCGCTGCTGAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVLMLGY*GAAEGV
Trigger: GACACCTTCAGCAGCGCCCCAGTACCCCAGCATGAG...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTGGGGAGCGCTCATGCTaGGGTACTGGGGCGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIGERSC*GTGALL
Trigger: CAGCAGCGCCCCAGTACCCCAGCATGAGCGCTCCCC...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGCTTAAGCAATCTCCATaGCCCCTGCAGTTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKLKQSP*PLQLSK
Trigger: CTTGGACAACTGCAGGGGCCATGGAGATTGCTTAAG...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGGGTCACCACAAGAAGTaGCTTCACAACCCACCACAA +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKGHHKK*LHNPPQ
Trigger: TTGTGGTGGGTTGTGAAGCCACTTCTTGTGGTGACC...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAACACTGTTACCAGGCTaGTGCGTTCCACATCCCAGA +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPTLLPG*CVPHPR
Trigger: TCTGGGATGTGGAACGCATCAGCCTGGTAACAGTGT...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGGTAAGCATTCAGTGTaGAGGAGGGACCAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKGKHSV*RRDQER
Trigger: GCGCTCCTGGTCCCTCCTTCACACTGAATGCTTACC...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTTTTCCCAGCCTTGCTaGAGTACAGAGATGATCCAG +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKFSQPC*STEMIQ
Trigger: CTGGATCATCTCTGTACTTCAGCAAGGCTGGGAAAA...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAAGGCACGTTTTTCTGTaGGCTGCTCTCCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPRHVFL*AALLDP
Trigger: TGGATCCAGGAGAGCAGCTCACAGAAAAACGTGCCT...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTACAAAGCCCACTGGGCTaGATGCTTCCCATGTTGCGG +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVQSPLG*MLPMLR
Trigger: CCGCAACATGGGAAGCATTCAGCCCAGTGGGCTTTG...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAACAAATCCCTCGTCCTaGGCACATCCAAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVTNPSS*AHPRAP
Trigger: GGGTGCCCTTGGATGTGCTCAGGACGAGGGATTTGT...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCAACAAACACCATAGCTaGATCTTCTTCAGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSNKHHS*IFFRCP
Trigger: GGGGCACCTGAAGAAGATTCAGCTATGGTGTTTGTT...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACCACTGGATCCGCGGATaGGCTATCAGTCGAACAGCC +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYHWIRG*AISRTA
Trigger: GGCTGTTCGACTGATAGCTCATCCGCGGATCCAGTG...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTCGCCCCGAAGTCCCTTaGAAATTCCAGTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIRPEVP*KFQSHW
Trigger: CCAGTGAGACTGGAATTTTCAAGGGACTTCGGGGCG...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGTGGAGCATAAAGAGCTaGCGTGGCTGCTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRWSIKS*RGCCCG
Trigger: ACCACAGCAGCAGCCACGTCAGCTCTTTATGCTCCA...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCTTTACAGGTTGGACCTaGGTAGCCAGGGTCACATAT +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITFTGWT*VARVTY
Trigger: ATATGTGACCCTGGCTACTCAGGTCCAACCTGTAAA...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCTTTACAGGTTGGACCTaGGTAGCCAGGGTCACATAT +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSFTGWT*VARVTY
Trigger: ATATGTGACCCTGGCTACTCAGGTCCAACCTGTAAA...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGATGTAGGAGCACGGGTTaGCTCCTGGGGTCAGGAACG +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRCRSTG*LLGSGT
Trigger: CGTTCCTGACCCCAGGAGTCAACCCGTGCTCCTACA...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCGGCAACGTCTGTGCTaGCCACGTAACGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIRQRLC*PRNGCW
Trigger: CCAGCACCCGTTACGTGGTCAGCACAGACGTTGCCG...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAACAGTCAGCCAGTTCTaGCTGGATGGAGCTCGATTG +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPTVSQF*LDGARL
Trigger: CAATCGAGCTCCATCCAGTCAGAACTGGCTGACTGT...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAGACTACAACCCCCACTaGAATGGAGAGCCATTCCCG +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTDYNPH*NGEPFP
Trigger: CGGGAATGGCTCTCCATTTCAGTGGGGGTTGTAGTC...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGATGGCCCAGTCGTTCTaGTCCAGGCCGTCATGTCTT +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRMAQSF*SRPSCL
Trigger: AAGACATGACGGCCTGGATCAGAACGACTGGGCCAT...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCTTGGTCAGCAGAGCCTaGGATGAGGACATTGTCAAT +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITLVSRA*DEDIVN
Trigger: ATTGACAATGTCCTCATCTCAGGCTCTGCTGACCAA...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAACCTCCCGTCCATCATaGCTGCCACAGAGCATCACA +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTTSRPS*LPQSIT
Trigger: TGTGATGCTCTGTGGCAGTCATGATGGACGGGAGGT...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGACCTCCCGTCCATCATaGCTGCCACAGAGCATCACA +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRTSRPS*LPQSIT
Trigger: TGTGATGCTCTGTGGCAGTCATGATGGACGGGAGGT...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATTGTCCAGTGCCCACTaGGCACGCTCCACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYELSSAH*ARSTPE
Trigger: CTCTGGGGTGGAGCGTGCTCAGTGGGCACTGGACAA...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACATTGTCCAGTGCCCACTaGGCACGCTCCACCCCAGAG +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTLSSAH*ARSTPE
Trigger: CTCTGGGGTGGAGCGTGCTCAGTGGGCACTGGACAA...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCACCTATGACTCCACCTTaGATGGTCTCCCAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPPMTPP*MVSQFA
Trigger: GGCAAACTGGGAGACCATTCAAGGTGGAGTCATAGG...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCGTGTACACTCGGTCTTaGGAAGGGCTTTCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSVYTRS*EGLSGN
Trigger: ATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACAC...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGGCTAGGAGGAAAGTCTaGCGGGCCCAGCCACTGCGC +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWARRKV*RAQPLR
Trigger: GCGCAGTGGCTGGGCCCGGCAGACTTTCCTCCTAGC...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTGCTAGGAGGAAAGTCTaGCGGGCCCAGCCACTGCGC +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIARRKV*RAQPLR
Trigger: GCGCAGTGGCTGGGCCCGGCAGACTTTCCTCCTAGC...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGAATTCACACAGCCTGTaGCCGCAGGTGGAGCAATCC +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRNSHSL*PQVEQS
Trigger: GGATTGCTCCACCTGCGGGCACAGGCTGTGTGAATT...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCACTGGCCCCGGTGTGTTaGTGTAGCCATGAAATTCAC +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPLAPVC*CSHEIH
Trigger: GTGAATTTCATGGCTACAGCAACACACCGGGGCCAG...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAGTGACGGCATTGCCATaGATAATCGCGCCACACTGT +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPVTALP*IIAPHC
Trigger: ACAGTGTGGCGCGATTATGCATGGCAATGCCGTCAC...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTTGGGAATGTCTGGGATaGCATCTCACAAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIWECLG*HLTSWA
Trigger: GGCCCAGCTTGTGAGATGGCATCCCAGACATTCCCA...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACACAGGGGCTCTGCACGTaGTCAGAACAGATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTQGLCT*SEQICS
Trigger: GGAGCAAATCTGTTCTGAGCACGTGCAGAGCCCCTG...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAGGATGCCCCCATTGTTaGTGTACTGAAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQGCPHC*CTEGGR
Trigger: GCGTCCTCCTTCAGTACAGCAACAATGGGGGCATCC...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATCTCTGCTAGCAGGTaGCACTGGATGCCCCCATTG +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQISASR*HWMPPL
Trigger: CAATGGGGGCATCCAGTGGCACCTGCTAGCAGAGAT...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATACCAGCGGAACCTGGTaGAAGGGGTCTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNTSGTW*KGSWQQ
Trigger: CTGCTGCCAAGACCCCTTGCACCAGGTTCCGCTGGT...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAACCTGAGAACACGGGCTaGCACCAGCGGAACCTGGTG +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEPENTG*HQRNLV
Trigger: CACCAGGTTCCGCTGGTGGCAGCCCGTGTTCTCAGG...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCGGGATGATCTGCTTCTaGTTCTCGGACAGAATGATG +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSGMICF*FSDRMM
Trigger: CATCATTCTGTCCGAGAAGCAGAAGCAGATCATCCC...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTGCCACCATCGAAATaGCGTTGCAGGTGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPLPPSK*RCRCLR
Trigger: GCGAAGACACCTGCAACGGCATTTCGATGGTGGCAA...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACACCATTCTCAGACGGTTaGCACCAGCGAAGGCGAGTA +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTPFSDG*HQRRRV
Trigger: TACTCGCCTTCGCTGGTGGCAACCGTCTGAGAATGG...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGCACTGCACATGTCTATaGAGCCATCCCCGATATAGA +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKHCTCL*SHPRYR
Trigger: TCTATATCGGGGATGGCTGCATAGACATGTGCAGTG...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGGACAGGGCCGGCATCTaGAGGGGAGCGCTCATGCTG +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKDRAGI*RGALML
Trigger: CAGCATGAGCGCTCCCCTGCAGATGCCGGCCCTGTC...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCTCCCCCAAAATAGAGTaGAGTGTCCTCGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSSPKIE*SVLGKN
Trigger: ATTCTTGCCGAGGACACTGCACTCTATTTTGGGGGA...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGTATCCGTGCCCGCTaGAGAGCTTGGGGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQSIRAR*RAWGKP
Trigger: AGGCTTGCCCCAAGCTCTGCAGCGGGCACGGATACT...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACAGTATCCGTGCCCGCTaGAGAGCTTGGGGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNSIRAR*RAWGKP
Trigger: AGGCTTGCCCCAAGCTCTGCAGCGGGCACGGATACT...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAAGTATCCGTGCCCGCTaGAGAGCTTGGGGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRSIRAR*RAWGKP
Trigger: AGGCTTGCCCCAAGCTCTGCAGCGGGCACGGATACT...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCAGATGGCACCGGTCGTaGAGTATCCGTGCCCGCTGC +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIRWHRS*SIRARC
Trigger: GCAGCGGGCACGGATACTGCACGACCGGTGCCATCT...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAAGCTCTCGTCGCAGATaGAGATGGCACCGGTCGTGC +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKSSRRR*RWHRSC
Trigger: GCACGACCGGTGCCATCTGCATCTGCGACGAGAGCT...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAAATGGTCTCCCAGTTTaGCTCGGTGACTCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPNGLPV*LGDSCG
Trigger: TCCGCAAGAGTCACCGAGGCAAACTGGGAGACCATT...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTCAGAGGCTTGGTAGCTaGTTGCCTGATCTGACAGCC +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIQRLGS*LPDLTA
Trigger: GGCTGTCAGATCAGGCAAGCAGCTACCAAGCCTCTG...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGCAGAGGCTTGGTAGCTaGTTGCCTGATCTGACAGCC +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRQRLGS*LPDLTA
Trigger: GGCTGTCAGATCAGGCAAGCAGCTACCAAGCCTCTG...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAACCATTGTGGCGTGGTTaGCACCAGCGCAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQPLWRG*HQRSKT
Trigger: AGTCTTACTGCGCTGGTGGCAACCACGCCACAATGG...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGCCATTGTGGCGTGGTTaGCACCAGCGCAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRPLWRG*HQRSKT
Trigger: AGTCTTACTGCGCTGGTGGCAACCACGCCACAATGG...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCCCTTCCAGCTCCCCGTaGTGGGTGCACAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSPSSSP*WVHRKK
Trigger: CTTTTTCCTGTGCACCCACCACGGGGAGCTGGAAGG...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCCAAATCCGAAAGCACTaGAACCTCCAATGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITQIRKH*NLQCSV
Trigger: CACAGAGCATTGGAGGTTCCAGTGCTTTCGGATTTG...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAGTGCTGTGGGGGAGGTaGGGTCCAGCACAGATCTCA +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKVLWGR*GPAQIS
Trigger: TGAGATCTGTGCTGGACCCCACCTCCCCCACAGCAC...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGTGCTGTGGGGGAGGTaGGGTCCAGCACAGATCTCA +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRVLWGR*GPAQIS
Trigger: TGAGATCTGTGCTGGACCCCACCTCCCCCACAGCAC...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTGCTAGCAGGTGCCACTaGATGCCCCCATTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSASRCH*MPPLLL
Trigger: CAGCAACAATGGGGGCATCCAGTGGCACCTGCTAGC...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGCTAGCAGGTGCCACTaGATGCCCCCATTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLASRCH*MPPLLL
Trigger: CAGCAACAATGGGGGCATCCAGTGGCACCTGCTAGC...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAGCCACCAGCGGAACCTaGTGCAAGGGGTCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTATSGT*CKGSWQ
Trigger: CTGCCAAGACCCCTTGCACCAGGTTCCGCTGGTGGC...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTGTCTTCGCGTCCTGTaGCAGGTCAATGGAAATGAT +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKCLRVL*QVNGND
Trigger: ATCATTTCCATTGACCTGCCACAGGACGCGAAGACA...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGCTTGTAGCATTGGTTTaGGCAGTGTATGGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKLVALV*AVYGKG
Trigger: TCCCTTGCCATACACTGCCCAAACCAATGCTACAAG...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATCCTCCAGCCCTGCATaGTTCCTGCGTAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVSSSPA*FLRSRC
Trigger: GCACCTACTACGCAGGAACCATGCAGGGCTGGAGGA...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTCCTCCAGCCCTGCATaGTTCCTGCGTAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSSSSPA*FLRSRC
Trigger: GCACCTACTACGCAGGAACCATGCAGGGCTGGAGGA...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCTCCTCCAGCCCTGCATaGTTCCTGCGTAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSSSSPA*FLRSRC
Trigger: GCACCTACTACGCAGGAACCATGCAGGGCTGGAGGA...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTAATGGCCCATGTCACTaGCTGAGAGCCGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLNGPCH*LRAGRV
Trigger: TACCCTGCCGGCTCTCAGCCAGTGACATGGGCCATT...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGCACGGGTTGACTCCTaGGGTCAGGAACGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLARVDS*GQERLY
Trigger: GTAAAGGCGTTCCTGACCCCAGGAGTCAACCCGTGC...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTGAGTGGCTTGGGACCTaGTATAAGGAGGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIEWLGT*YKEGEA
Trigger: TGCCTCTCCCTCCTTATACCAGGTCCCAAGCCACTC...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCCCAGTTCTGACTGGATaGAGCTCGATTGAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSPVLTG*SSIEVV
Trigger: GACAACTTCAATCGAGCTCCATCCAGTCAGAACTGG...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACCAACCCCCACTGAAATaGAGAGCCATTCCCGACGCC +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYQPPLK*RAIPDA
Trigger: GGCGTCGGGAATGGCTCTCCATTTCAGTGGGGGTTG...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGCTCATGCTGGGGTACTaGGGCGCTGCTGAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQLMLGY*GAAEGV
Trigger: GACACCTTCAGCAGCGCCCCAGTACCCCAGCATGAG...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAACTTCCTTCCGGCAGATaGGACGATGGCAAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQLPSGR*DDGKRS
Trigger: TGACCTCTTGCCATCGTCCCATCTGCCGGAAGGAAG...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACACTTCCTTCCGGCAGATaGGACGATGGCAAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTLPSGR*DDGKRS
Trigger: TGACCTCTTGCCATCGTCCCATCTGCCGGAAGGAAG...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGGAAGGAAGGCACTaGGTCTGTACGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLEEGRH*VCTSCQ
Trigger: CTGGCAGCTCGTACAGACCCAGTGCCTTCCTTCCTC...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCACTAGAGGAGACATaGTCAGGCAGCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRALEET*SGSWMV
Trigger: CACCATCCAGCTGCCTGACCATGTCTCCTCTAGTGC...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCGTTTCTTCTCCCTTCTaGATCCAGCGGAACTGTGTT +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITVSSPF*IQRNCV
Trigger: AACACAGTTCCGCTGGATCCAGAAGGGAGAAGAAAC...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGCCCGCTGCAGAGCTTaGGGCAAGCCTCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRARCRA*GKPLQC
Trigger: ACATTGGAGAGGCTTGCCCCAAGCTCTGCAGCGGGC...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAGAGCAGTCATCACCTTaGAAGCTCTCGTCGCAGATG +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPEQSSP*KLSSQM
Trigger: CATCTGCGACGAGAGCTTCCAAGGTGATGACTGCTC...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGCAATATGCAGGGAAATaGGCACCTCGCCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQQYAGK*APRPAP
Trigger: GGGAGCAGGGCGAGGTGCTCATTTCCCTGCATATTG...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAGGTAAGCATTCAGTGTaGAGGAGGGACCAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKGKHSV*RRDQER
Trigger: GCGCTCCTGGTCCCTCCTTCACACTGAATGCTTACC...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGCCGCCCATCTTTGTTaGAAACCAGGGCCTTACCAC +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKAAHLC*KPGPYH
Trigger: GTGGTAAGGCCCTGGTTTTCAACAAAGATGGGCGGC...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACGCCGCCCATCTTTGTTaGAAACCAGGGCCTTACCAC +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYAAHLC*KPGPYH
Trigger: GTGGTAAGGCCCTGGTTTTCAACAAAGATGGGCGGC...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCTGCCACCATCTGAACTaGATTCCAAACTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITCHHLN*IPNCFA
Trigger: TGCAAAGCAGTTTGGAATTCAGTTCAGATGGTGGCA...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTTATGCCATGATCGCATaGGCCATGCCCACTGCACAT +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIYAMIA*AMPTAH
Trigger: ATGTGCAGTGGGCATGGCTCATGCGATCATGGCATA...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTCACCTGCATATGCCATaGTCGCATGAGCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLHLHMP*SHEPCP
Trigger: TGGGCATGGCTCATGCGATCATGGCATATGCAGGTG...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTACACCTGCATATGCCATaGTCGCATGAGCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVHLHMP*SHEPCP
Trigger: TGGGCATGGCTCATGCGATCATGGCATATGCAGGTG...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACCCATTGTTGCTGTACTaGAGGAGGACGCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYPLLLY*RRTPSS
Trigger: AGAGGAGGGCGTCCTCCTTCAGTACAGCAACAATGG...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTCCATTGTTGCTGTACTaGAGGAGGACGCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSPLLLY*RRTPSS
Trigger: AGAGGAGGGCGTCCTCCTTCAGTACAGCAACAATGG...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCTCCAAATATCATTGCTaGTGGTGTGGCAGCACAGAA +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITSKYHC*WCGSTE
Trigger: TTCTGTGCTGCCACACCATCAGCAATGATATTTGGA...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAACAGAAACACACTCCTaGAATGCAGTCCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQTETHS*NAVPMA
Trigger: GGCCATGGGGACTGCATTTCAGGAGTGTGTTTCTGT...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTTGTACCACAGAGGGCTaGGCTTCCCCTCAAACCTAT +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAICTTEG*ASPQTY
Trigger: ATAGGTTTGAGGGGAAGCTCAGCCCTCTGTGGTACA...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGTGTACCACAGAGGGCTaGGCTTCCCCTCAAACCTAT +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRCTTEG*ASPQTY
Trigger: ATAGGTTTGAGGGGAAGCTCAGCCCTCTGTGGTACA...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAGAACACACTCTTCGGTaGCAAGATGCCAGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTEHTLR*QDASPC
Trigger: GCAAGGACTGGCATCTTGTCACCGAAGAGTGTGTTC...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAGAACACACTCTTCGGTaGCAAGATGCCAGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQEHTLR*QDASPC
Trigger: GCAAGGACTGGCATCTTGTCACCGAAGAGTGTGTTC...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACTGGCCTGAATCCATCTaGACCGGGTCCTGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYWPESI*TGSWEK
Trigger: TTTCTCCCAGGACCCGGTTCAGATGGATTCAGGCCA...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATACACTGGATCCGCGGATaGGCTATCAGTCGAACAGCC +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIHWIRG*AISRTA
Trigger: GGCTGTTCGACTGATAGCTCATCCGCGGATCCAGTG...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAACACTGGATCCGCGGATaGGCTATCAGTCGAACAGCC +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKHWIRG*AISRTA
Trigger: GGCTGTTCGACTGATAGCTCATCCGCGGATCCAGTG...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTACGCCCCGAAGTCCCTTaGAAATTCCAGTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVRPEVP*KFQSHW
Trigger: CCAGTGAGACTGGAATTTTCAAGGGACTTCGGGGCG...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTTGTAGGAGCACGGGTTaGCTCCTGGGGTCAGGAACG +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTICRSTG*LLGSGT
Trigger: CGTTCCTGACCCCAGGAGTCAACCCGTGCTCCTACA...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGACGAGAGGCCACCGTTaGGAGAATACTGTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRTRGHR*ENTVGA
Trigger: TGCTCCTACAGTATTCTCTCAACGGTGGCCTCTCGT...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACATTGGTGCCTCCTGGGTaGAGCAGCCATTTCCTACTA +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTLVPPG*SSHFLL
Trigger: TAGTAGGAAATGGCTGCTTCACCCAGGAGGCACCAA...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGTGCTGGCCTTTTCAATaGAGACCAGGGCATCACCAG +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRCWPFQ*RPGHHQ
Trigger: CTGGTGATGCCCTGGTCTTCATTGAAAAGGCCAGCA...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTACGGCAACGTCTGTGCTaGCCACGTAACGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLRQRLC*PRNGCW
Trigger: CCAGCACCCGTTACGTGGTCAGCACAGACGTTGCCG...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAACGGCAACGTCTGTGCTaGCCACGTAACGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKRQRLC*PRNGCW
Trigger: CCAGCACCCGTTACGTGGTCAGCACAGACGTTGCCG...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATCAAAAGGAGCTGGTTaGTGCCAACGGAAACGAGTG +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPSKGAG*CQRKRV
Trigger: CACTCGTTTCCGTTGGCATCAACCAGCTCCTTTTGA...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGTAGCAGTTTGGCCCTaGGTATCCCGGATCACAGAT +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRVAVWP*VSRITD
Trigger: ATCTGTGATCCGGGATACTCAGGGCCAAACTGCTAC...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACACCTATGACTCCACCTTaGATGGTCTCCCAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTPMTPP*MVSQFA
Trigger: GGCAAACTGGGAGACCATTCAAGGTGGAGTCATAGG...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTCTCTCTGAGCTTGTGTaGAGTCCTTTGGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAILSELV*SPLAGA
Trigger: AGCACCAGCCAAAGGACTTCACACAAGCTCAGAGAG...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGCTCTCTGAGCTTGTGTaGAGTCCTTTGGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRLSELV*SPLAGA
Trigger: AGCACCAGCCAAAGGACTTCACACAAGCTCAGAGAG...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATATGAGCACCTCGCCCTaGTCCCCATCCCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYMSTSP*SPSPSS
Trigger: GCTGGAAGGGGATGGGGAGCAGGGCGAGGTGCTCAT...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGGGTTGCCCGCAATATaGAGGGAAATGAGCACCTCG +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLGLPAI*REMSTS
Trigger: CGAGGTGCTCATTTCCCTGCATATTGCGGGCAACCC...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACGGGTTGCCCGCAATATaGAGGGAAATGAGCACCTCG +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYGLPAI*REMSTS
Trigger: CGAGGTGCTCATTTCCCTGCATATTGCGGGCAACCC...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGTGACGGCATTGCCATaGATAATCGCGCCACACTGT +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRVTALP*IIAPHC
Trigger: ACAGTGTGGCGCGATTATGCATGGCAATGCCGTCAC...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGTCTTCTTGGACGAGGTaGCAGGTAAGGCCGTGGTTG +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKSSWTR*QVRPWL
Trigger: CAACCACGGCCTTACCTGGCACCTCGTCCAAGAAGA...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTTCTTCTTGGACGAGGTaGCAGGTAAGGCCGTGGTTG +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLSSWTR*QVRPWL
Trigger: CAACCACGGCCTTACCTGGCACCTCGTCCAAGAAGA...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAATGCTGTCAGGCTTGTTaGATGAAGCACTCTCTCCGC +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQCCQAC*MKHSLR
Trigger: GCGGAGAGAGTGCTTCATGCAACAAGCCTGACAGCA...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTACCAGCGGAACCTGGTaGAAGGGGTCTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTITSGTW*KGSWQQ
Trigger: CTGCTGCCAAGACCCCTTGCACCAGGTTCCGCTGGT...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCATAACTGGGATGATCTaGTTCTGCTTCTCGGACAGA +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSITGMI*FCFSDR
Trigger: TCTGTCCGAGAAGCAGAAGCAGATCATCCCAGTTAT...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGTTCCTTCGCATCCTTTaGCTGCAGAAGCCGGGTAAC +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRFLRIL*LQKPGN
Trigger: GTTACCCGGCTTCTGCAGGCAAAGGATGCGAAGGAA...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTTTCCTTCGCATCCTTTaGCTGCAGAAGCCGGGTAAC +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIFLRIL*LQKPGN
Trigger: GTTACCCGGCTTCTGCAGGCAAAGGATGCGAAGGAA...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTAGTCCCCATGGCCACTaGAGTAACTGGGACAAGGCT +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSSPHGH*SNWDKA
Trigger: AGCCTTGTCCCAGTTACTGCAGTGGCCATGGGGACT...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAACACACTCCTGAAATaGAGTCCCCATGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTNTLLK*SPHGHC
Trigger: GCAGTGGCCATGGGGACTGCATTTCAGGAGTGTGTT...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGGTGCTGCTGGGGTGGTaGTCGGTGGAGCATAAAGAG +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQVLLGW*SVEHKE
Trigger: CTCTTTATGCTCCACCGAGCACCACCCCAGCAGCAC...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGCTGCGTAGTAGGTGCTaGTGGGGTGGTGCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWLRSRC*WGGARW
Trigger: CCACCGAGCACCACCCCAGCAGCACCTACTACGCAG...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCTGCGTAGTAGGTGCTaGTGGGGTGGTGCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSILRSRC*WGGARW
Trigger: CCACCGAGCACCACCCCAGCAGCACCTACTACGCAG...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACATTCCTGCGTAGTAGGTaGTGCTGGGGTGGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTFLRSR*CWGGAR
Trigger: CCGAGCACCACCCCAGCAGCACCTACTACGCAGGAA...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAGCCCTGCATGGTTCCTaGGTAGTAGGTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEALHGS*VVGAAG
Trigger: CCCAGCAGCACCTACTACGCAGGAACCATGCAGGGC...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCACACGGGCATCTTGGTaGCTCCTGGGTGAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFITRASW*LLGEAA
Trigger: GGCTGCTTCACCCAGGAGGCACCAAGATGCCCGTGT...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAACGCAGTTTCCCTGGATaGATCTCCCATGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKRSFPG*ISHGHC
Trigger: GCAGTGGCCATGGGAGATGCATCCAGGGAAACTGCG...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGCCCGTCCATCATGACTaGCACAGAGCATCACACCAT +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRPVHHD*HRASHH
Trigger: ATGGTGTGATGCTCTGTGGCAGTCATGATGGACGGG...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAGTCGTGCAGTATCCGTaGCCGCTGCAGAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSVVQYP*PLQSLG
Trigger: CCCCAAGCTCTGCAGCGGGCACGGATACTGCACGAC...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGGTCGTGCAGTATCCGTaGCCGCTGCAGAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPVVQYP*PLQSLG
Trigger: CCCCAAGCTCTGCAGCGGGCACGGATACTGCACGAC...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTTTGCAGCTGTCCGTCTaGGACATGCTCCCAATTTGC +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAILQLSV*DMLPIC
Trigger: GCAAATTGGGAGCATGTCGCAGACGGACAGCTGCAA...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTACACTCAGGTCACTGTTaGAGCTGTCCGTCTGCGACA +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVHSGHC*SCPSAT
Trigger: TGTCGCAGACGGACAGCTGCAACAGTGACCTGAGTG...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACTGCTGGGCGATGACATaGCAGGTGATCCCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYCWAMT*QVIPLL
Trigger: CAACAACGGGATCACCTGGCATGTCATCGCCCAGCA...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAAGTCCTTTGGCTGGTaGTGGGCGATGACATGCCAG +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYKSFGW*WAMTCQ
Trigger: CTGGCATGTCATCGCCCAGCACCAGCCAAAGGACTT...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAAAGTCCTTTGGCTGGTaGTGGGCGATGACATGCCAG +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVKSFGW*WAMTCQ
Trigger: CTGGCATGTCATCGCCCAGCACCAGCCAAAGGACTT...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTAAGTCCTTTGGCTGGTaGTGGGCGATGACATGCCAG +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLKSFGW*WAMTCQ
Trigger: CTGGCATGTCATCGCCCAGCACCAGCCAAAGGACTT...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTGACTCCTTTCATCCGTaGCTCCAGGGGGACATTGTA +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIDSFHP*LQGDIV
Trigger: TACAATGTCCCCCTGGAGGCACGGATGAAAGGAGTC...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTCGCTCATTCAGTTTTaGAGACGCCGGGACGGAGGA +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSSLIQF*RRRDGG
Trigger: TCCTCCGTCCCGGCGTCTCCAAAACTGAATGAGCGA...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTACCGGAACGTAGTAGGTaGGGTTGCCCGCAATATGCA +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVPERSR*GCPQYA
Trigger: TGCATATTGCGGGCAACCCCACCTACTACGTTCCGG...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCTCTTTGAAAATAACCTaGCCCCGGTGTGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSSLKIT*PRCVAV
Trigger: TACAGCAACACACCGGGGCCAGGTTATTTTCAAAGA...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGTTCTCGTGGGCCATATaGTTCACAGAAGGTGACGGC +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRFSWAI*FTEGDG
Trigger: GCCGTCACCTTCTGTGAACCATATGGCCCACGAGAA...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCAACATTGGGAATGTCTaGGATGCCATCTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSNIGNV*DAISQA
Trigger: AGCTTGTGAGATGGCATCCCAGACATTCCCAATGTT...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTCCAGGGCCTTACCACTaGCCAAGACACCACAACCAA +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLPGPYH*PRHHNQ
Trigger: TTGGTTGTGGTGTCTTGGCCAGTGGTAAGGCCCTGG...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGAGTCTCAGTGTGAACTaGAGAAACCTGGATTGTGAG +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKSLSVN*RNLDCE
Trigger: CTCACAATCCAGGTTTCTCCAGTTCACACTGAGACT...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCAGTCTCAGTGTGAACTaGAGAAACCTGGATTGTGAG +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSSLSVN*RNLDCE
Trigger: CTCACAATCCAGGTTTCTCCAGTTCACACTGAGACT...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCTGGCATTCAGTGCCTTaGTACCCCTGGTCACACCTG +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSWHSVP*YPWSHL
Trigger: CAGGTGTGACCAGGGGTACCAAGGCACTGAATGCCA...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCAGGGCAGCTTCTGGGTaGCATTCAGTGCCTTGGTAC +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSRAASG*HSVPWY
Trigger: GTACCAAGGCACTGAATGCCACCCAGAAGCTGCCCT...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATACGGAAGGGCAGCTTCTaGGTGGCATTCAGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIRKGSF*VAFSAL
Trigger: CAAGGCACTGAATGCCACCCAGAAGCTGCCCTTCCG...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAATGTGAGCTGCTCTCCTaGATCCATCGGAATCTGGTC +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQCELLS*IHRNLV
Trigger: GACCAGATTCCGATGGATCCAGGAGAGCAGCTCACA...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTGGCCACTGCAGTAACTaGGACAAGGCTCGGATATGT +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIGHCSN*DKARIC
Trigger: ACATATCCGAGCCTTGTCCCAGTTACTGCAGTGGCC...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGGGTTTGGGCAGTGTATaGCAAGGGAACATTGATGAA +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKGLGSV*QGNIDE
Trigger: TTCATCAATGTTCCCTTGCCATACACTGCCCAAACC...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGCGTAGTAGGTGCTGCTaGGGTGGTGCTCGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKRSRCC*GGARWS
Trigger: GCTCCACCGAGCACCACCCCAGCAGCACCTACTACG...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACACATCTTGGTGCCTCCTaGGTGAAGCAGCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTHLGAS*VKQPFP
Trigger: AGGAAATGGCTGCTTCACCCAGGAGGCACCAAGATG...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTCATCTTGGTGCCTCCTaGGTGAAGCAGCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIHLGAS*VKQPFP
Trigger: AGGAAATGGCTGCTTCACCCAGGAGGCACCAAGATG...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATACACACACGGGCATCTTaGTGCCTCCTGGGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIHTRAS*CLLGEA
Trigger: TGCTTCACCCAGGAGGCACCAAGATGCCCGTGTGTG...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACCACACACGGGCATCTTaGTGCCTCCTGGGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNHTRAS*CLLGEA
Trigger: TGCTTCACCCAGGAGGCACCAAGATGCCCGTGTGTG...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAACACACACGGGCATCTTaGTGCCTCCTGGGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKHTRAS*CLLGEA
Trigger: TGCTTCACCCAGGAGGCACCAAGATGCCCGTGTGTG...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAGCCAACGGAAACGAGTaGCTTGGGACCTGGTATAAG +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQANGNE*LGTWYK
Trigger: CTTATACCAGGTCCCAAGCCACTCGTTTCCGTTGGC...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATGGATGCATCTCCCATaGCCACTGCACATGTCTATG +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPWMHLP*PLHMSM
Trigger: CATAGACATGTGCAGTGGCCATGGGAGATGCATCCA...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGCAGACGCAGTTTCCCTaGATGCATCTCCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKQTQFP*MHLPWP
Trigger: TGGCCATGGGAGATGCATCCAGGGAAACTGCGTCTG...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTTGTCTTTGAGTTaGGTTGGAAGAGAGGTCTCG +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITKLSLS*VGREVS
Trigger: CGAGACCTCTCTTCCAACCCAACTCAAAGACAACTT...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGCAGGCCGTCATGTCTTaGCTGCCACCAGCGGAAGCG +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWQAVMS*LPPAEA
Trigger: CGCTTCCGCTGGTGGCAGCCAAGACATGACGGCCTG...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAAGCATAACGGTCCTTTaGTCAGCAGAGCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPSITVL*SAEPEM
Trigger: CATCTCAGGCTCTGCTGACCAAAGGACCGTTATGCT...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGGAGGAAGGAAGGCACTaGGTCTGTACGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQEEGRH*VCTSCQ
Trigger: CTGGCAGCTCGTACAGACCCAGTGCCTTCCTTCCTC...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAGCACTAGAGGAGACATaGTCAGGCAGCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVALEET*SGSWMV
Trigger: CACCATCCAGCTGCCTGACCATGTCTCCTCTAGTGC...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGACGTCGCAGATGCAGATaGCACCGGTCGTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRRRRCR*HRSCSI
Trigger: GATACTGCACGACCGGTGCCATCTGCATCTGCGACG...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTGCCTTGTCCACAGCGTaGGGGCCACTCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIALSTA*GPLRSL
Trigger: CAGTGACCTGAGTGGCCCCCACGCTGTGGACAAGGC...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAGCCTTGTCCACAGCGTaGGGGCCACTCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKALSTA*GPLRSL
Trigger: CAGTGACCTGAGTGGCCCCCACGCTGTGGACAAGGC...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCGTGAAGTCCTTTGGCTaGTGCTGGGCGATGACATGC +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSVKSFG*CWAMTC
Trigger: GCATGTCATCGCCCAGCACCAGCCAAAGGACTTCAC...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCAGACGGAACCTTATATaGGGAATAGGAAAGGGTATC +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSRRNLI*GIGKGI
Trigger: GATACCCTTTCCTATTCCTCATATAAGGTTCCGTCT...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTACACTGTTACCAGGCTaGTGCGTTCCACATCCCAGA +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSTLLPG*CVPHPR
Trigger: TCTGGGATGTGGAACGCATCAGCCTGGTAACAGTGT...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAGGTAAGCATTCAGTGTaGAGGAGGGACCAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEGKHSV*RRDQER
Trigger: GCGCTCCTGGTCCCTCCTTCACACTGAATGCTTACC...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAACGGTTGCCACCATCTaGACTGAATTCCAAACTGCT +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPTVATI*TEFQTA
Trigger: AGCAGTTTGGAATTCAGTTCAGATGGTGGCAACCGT...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAAAGGCCGTGGTTGGTTaGGTACTCCAGCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRKAVVG*VLQLHL
Trigger: CAGGTGAAGCTGGAGTACTCAACCAACCACGGCCTT...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTTATGCCATGATCGCATaGGCCATGCCCACTGCACAT +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLYAMIA*AMPTAH
Trigger: ATGTGCAGTGGGCATGGCTCATGCGATCATGGCATA...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAACACCTGCATATGCCATaGTCGCATGAGCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKHLHMP*SHEPCP
Trigger: TGGGCATGGCTCATGCGATCATGGCATATGCAGGTG...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGCTGGTTCTCAAAATCTaGCATAATTGTGGACGGAAG +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKLVLKI*HNCGRK
Trigger: CTTCCGTCCACAATTATGTCAGATTTTGAGAACCAG...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAATGATCCAGAAGAGATaGCACCACACCCTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPMIQKR*HHTLVL
Trigger: CAGAACAAGGGTGTGGTGTCATCTCTTCTGGATCAT...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAGTCATAGTCCTCCCCTaGGAACACGGGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKVIVLP*EHGLPP
Trigger: TGGTGGCAGCCCGTGTTCTCAGGGGAGGACTATGAC...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAGTCATAGTCCTCCCCTaGGAACACGGGCTGCCACCA +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSVIVLP*EHGLPP
Trigger: TGGTGGCAGCCCGTGTTCTCAGGGGAGGACTATGAC...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCGCAGTACTGCTGAATTaGTTGGCACAACCTATGTTT +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSAVLLN*LAQPMF
Trigger: AAACATAGGTTGTGCCAATCAATTCAGCAGTACTGC...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGACAGAAACACACTCCTaGAATGCAGTCCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKTETHS*NAVPMA
Trigger: GGCCATGGGGACTGCATTTCAGGAGTGTGTTTCTGT...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTGTGATTGGGGACATTTaGCACACAGGTTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIVIGDI*HTGSLC
Trigger: GCACAAGGAACCTGTGTGTCAAATGTCCCCAATCAC...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAGTTCCAGGAAGGACATaGAGTCCAACTCTCGAAGCA +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQVPGRT*SPTLEA
Trigger: TGCTTCGAGAGTTGGACTTCATGTCCTTCCTGGAAC...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAACAAAGCCCACTGGGCTaGATGCTTCCCATGTTGCGG +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEQSPLG*MLPMLR
Trigger: CCGCAACATGGGAAGCATTCAGCCCAGTGGGCTTTG...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACAAAGCCCACTGGGCTaGATGCTTCCCATGTTGCGG +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTQSPLG*MLPMLR
Trigger: CCGCAACATGGGAAGCATTCAGCCCAGTGGGCTTTG...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCCAAAAAGGTAGATGCTaGCACATGAAAATCCCAGGT +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSQKGRC*HMKIPG
Trigger: ACCTGGGATTTTCATGTGTCAGCATCTACCTTTTTG...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGAACACACTCTTCGGTaGCAAGATGCCAGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLEHTLR*QDASPC
Trigger: GCAAGGACTGGCATCTTGTCACCGAAGAGTGTGTTC...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCTTCCGAGGTGTAAATTaGACTTTCCGTGTAATGCAG +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITFRGVN*TFRVMQ
Trigger: CTGCATTACACGGAAAGTTCAATTTACACCTCGGAA...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATATGGCCTGAATCCATCTaGACCGGGTCCTGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIWPESI*TGSWEK
Trigger: TTTCTCCCAGGACCCGGTTCAGATGGATTCAGGCCA...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTACAAATCCCTCGTCCTaGGCACATCCAAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTITNPSS*AHPRAP
Trigger: GGGTGCCCTTGGATGTGCTCAGGACGAGGGATTTGT...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATCGCCCCGAAGTCCCTTaGAAATTCCAGTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNRPEVP*KFQSHW
Trigger: CCAGTGAGACTGGAATTTTCAAGGGACTTCGGGGCG...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAATGTAGGAGCACGGGTTaGCTCCTGGGGTCAGGAACG +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKCRSTG*LLGSGT
Trigger: CGTTCCTGACCCCAGGAGTCAACCCGTGCTCCTACA...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTTGTAGGAGCACGGGTTaGCTCCTGGGGTCAGGAACG +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSICRSTG*LLGSGT
Trigger: CGTTCCTGACCCCAGGAGTCAACCCGTGCTCCTACA...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAACGAGAGGCCACCGTTaGGAGAATACTGTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVTRGHR*ENTVGA
Trigger: TGCTCCTACAGTATTCTCTCAACGGTGGCCTCTCGT...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGCTGGCCTTTTCAATaGAGACCAGGGCATCACCAG +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSCWPFQ*RPGHHQ
Trigger: CTGGTGATGCCCTGGTCTTCATTGAAAAGGCCAGCA...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACACGGCAACGTCTGTGCTaGCCACGTAACGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTRQRLC*PRNGCW
Trigger: CCAGCACCCGTTACGTGGTCAGCACAGACGTTGCCG...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAATGGCCCAGTCGTTCTaGTCCAGGCCGTCATGTCTT +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIMAQSF*SRPSCL
Trigger: AAGACATGACGGCCTGGATCAGAACGACTGGGCCAT...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGCAGCAGAGCCTGAGATaGGGACATTGTCAATGGCCC +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQQQSLR*GHCQWP
Trigger: GGGCCATTGACAATGTCCTCATCTCAGGCTCTGCTG...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTGTCGAGTTGTGTTGGTaGGGGCATCTTCAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIVELCW*GHLQEE
Trigger: TTCTTCCTGAAGATGCCCTCACCAACACAACTCGAC...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAGTCGAGTTGTGTTGGTaGGGGCATCTTCAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQVELCW*GHLQEE
Trigger: TTCTTCCTGAAGATGCCCTCACCAACACAACTCGAC...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACACCACAATTCCATTGCTaGTCACAAAAGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTPQFHC*SQKAAT
Trigger: GGTGGCAGCCTTTTGTGATCAGCAATGGAATTGTGG...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCGAGGAGAGAGCATTGTaGGTCTTGTCCTTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSEERAL*VLSFFL
Trigger: TAAAAAGAAGGACAAGACTCACAATGCTCTCTCCTC...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCGATTCTTTTCCAGCTTaGGCTGTTGACAGAGTTGTA +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITDSFPA*AVDRVV
Trigger: TACAACTCTGTCAACAGCTCAAGCTGGAAAAGAATC...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGCAGGCAGCTGGATGGTaGTTCTTTTCCAGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKQAAGW*FFSSLS
Trigger: GCTCAAGCTGGAAAAGAATCACCATCCAGCTGCCTG...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTTGGGAAGGTCGTGACTaGAAACAGAGCAGTCATCAC +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIWEGRD*KQSSHH
Trigger: GTGATGACTGCTCTGTTTTCAGTCACGACCTTCCCA...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGCCATTAAAGTACAGTaGGTCTCCATGGGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKAIKVQ*VSMGVG
Trigger: CCCTACGCCCATGGAGACTCACTGTACTTTAATGGC...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCTTTGCGAGTGCTGAGTaGCAATATATCCATATGTGG +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSFASAE*QYIHMW
Trigger: CCACATATGGATATATTGTCACTCAGCACTCGCAAA...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429186.2
CDS-3UTR GCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTATGAGCACCTCGCCCTaGTCCCCATCCCCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIMSTSP*SPSPSS
Trigger: GCTGGAAGGGGATGGGGAGCAGGGCGAGGTGCTCAT...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAATGGGAATGTCTGGGATaGCATCTCACAAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKWECLG*HLTSWA
Trigger: GGCCCAGCTTGTGAGATGGCATCCCAGACATTCCCA...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCGCTGATCAGGGGCTCTaGACGTGCTCAGAACAGATT +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSADQGL*TCSEQI
Trigger: AATCTGTTCTGAGCACGTGCAGAGCCCCTGATCAGC...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGCTGATCAGGGGCTCTaGACGTGCTCAGAACAGATT +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLADQGL*TCSEQI
Trigger: AATCTGTTCTGAGCACGTGCAGAGCCCCTGATCAGC...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACATGAGCCATGCCCACTaGACATGTTGGGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHMSHAH*TCWGTA
Trigger: AGCAGTGCCCCAACATGTGCAGTGGGCATGGCTCAT...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTACCCCTGGTCACACCTaGATATGCCATGATCGCATG +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLTPGHT*ICHDRM
Trigger: CATGCGATCATGGCATATGCAGGTGTGACCAGGGGT...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGTGCTGTCAGGCTTGTTaGATGAAGCACTCTCTCCGC +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKCCQAC*MKHSLR
Trigger: GCGGAGAGAGTGCTTCATGCAACAAGCCTGACAGCA...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAGGACGCCCTCCTCTCTaGTGTCAGGCTTGTTGCATG +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEGRPPL*CQACCM
Trigger: CATGCAACAAGCCTGACAGCAGAGAGGAGGGCGTCC...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAGGATGCCCCCATTGTTaGTGTACTGAAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIGCPHC*CTEGGR
Trigger: GCGTCCTCCTTCAGTACAGCAACAATGGGGGCATCC...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTCCTGAGAACACGGGCTaGCACCAGCGGAACCTGGTG +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIPENTG*HQRNLV
Trigger: CACCAGGTTCCGCTGGTGGCAGCCCGTGTTCTCAGG...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAGATGATGTCATCGACTaGCCACTGGTCATAGTCCTC +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQDDVID*PLVIVL
Trigger: GAGGACTATGACCAGTGGGCAGTCGATGACATCATC...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACACGTTTTTCTGTGAGCTaGTCTCCTGGATCCATCGGA +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTRFSVS*SPGSIG
Trigger: TCCGATGGATCCAGGAGAGCAGCTCACAGAAAAACG...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTCGTTTTTCTGTGAGCTaGTCTCCTGGATCCATCGGA +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIRFSVS*SPGSIG
Trigger: TCCGATGGATCCAGGAGAGCAGCTCACAGAAAAACG...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTTTGCCACCATCGAAATaGCGTTGCAGGTGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLLPPSK*RCRCLR
Trigger: GCGAAGACACCTGCAACGGCATTTCGATGGTGGCAA...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGGCTTGCTACAGCCCATaGTCATTTCAAACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKACYSP*SFQTAK
Trigger: TTTTGCAGTTTGAAATGAGCATGGGCTGTAGCAAGC...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACCAGATTCCCCCTCTCTaGACCATACACTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYQIPPL*TIHFRP
Trigger: TGGCCTGAAGTGTATGGTGCAGAGAGGGGGAATCTG...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTCTGCGTAGTAGGTGCTaGTGGGGTGGTGCTCGGTGG +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTLRSRC*WGGARW
Trigger: CCACCGAGCACCACCCCAGCAGCACCTACTACGCAG...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGATTCCTGCGTAGTAGGTaGTGCTGGGGTGGTGCTCGG +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGFLRSR*CWGGAR
Trigger: CCGAGCACCACCCCAGCAGCACCTACTACGCAGGAA...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAGCCCTGCATGGTTCCTaGGTAGTAGGTGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSALHGS*VVGAAG
Trigger: CCCAGCAGCACCTACTACGCAGGAACCATGCAGGGC...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAACACGGGCATCTTGGTaGCTCCTGGGTGAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLTRASW*LLGEAA
Trigger: GGCTGCTTCACCCAGGAGGCACCAAGATGCCCGTGT...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGATCTCCCATGGCCACTaGACATGTCTATGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRISHGH*TCLCSH
Trigger: ATGGCTGCATAGACATGTGCAGTGGCCATGGGAGAT...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGCCGTCATGTCTTGGCTaGCACCAGCGGAAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWPSCLG*HQRKRV
Trigger: CACTCGCTTCCGCTGGTGGCAGCCAAGACATGACGG...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCACCGTCATGTCTTGGCTaGCACCAGCGGAAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSPSCLG*HQRKRV
Trigger: CACTCGCTTCCGCTGGTGGCAGCCAAGACATGACGG...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTACCCGTCCATCATGACTaGCACAGAGCATCACACCAT +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVPVHHD*HRASHH
Trigger: ATGGTGTGATGCTCTGTGGCAGTCATGATGGACGGG...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTCAAAATGTTGTCCAGTaGCCACTGAGCACGCTCCAC +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLQNVVQ*PLSTLH
Trigger: GTGGAGCGTGCTCAGTGGGCACTGGACAACATTTTG...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGGGTCTGTACGAGCTaGCAGGAATCCGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVWVCTS*QESDLA
Trigger: TGCAAGATCGGATTCCTGGCAGCTCGTACAGACCCA...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTAGCTCTCGTCGCAGATaGAGATGGCACCGGTCGTGC +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPSSRRR*RWHRSC
Trigger: GCACGACCGGTGCCATCTGCATCTGCGACGAGAGCT...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCTGCCTCGGTGACTCTTaGGGACTCAAAATTATCTTT +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSCLGDS*GLKIIF
Trigger: AAAGATAATTTTGAGTCCGCAAGAGTCACCGAGGCA...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTTTGCAGCTGTCCGTCTaGGACATGCTCCCAATTTGC +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLLQLSV*DMLPIC
Trigger: GCAAATTGGGAGCATGTCGCAGACGGACAGCTGCAA...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCTTGCAGCTGTCCGTCTaGGACATGCTCCCAATTTGC +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSLQLSV*DMLPIC
Trigger: GCAAATTGGGAGCATGTCGCAGACGGACAGCTGCAA...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAACACTCAGGTCACTGTTaGAGCTGTCCGTCTGCGACA +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKHSGHC*SCPSAT
Trigger: TGTCGCAGACGGACAGCTGCAACAGTGACCTGAGTG...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGACACTCAGGTCACTGTTaGAGCTGTCCGTCTGCGACA +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRHSGHC*SCPSAT
Trigger: TGTCGCAGACGGACAGCTGCAACAGTGACCTGAGTG...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACATTGTTGACGCTGTATTaGAGCAGCACTGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTLLTLY*SSTALS
Trigger: GGACAAGGCAGTGCTGCTGCAATACAGCGTCAACAA...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAAAGTCCTTTGGCTGGTaGTGGGCGATGACATGCCAG +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRKSFGW*WAMTCQ
Trigger: CTGGCATGTCATCGCCCAGCACCAGCCAAAGGACTT...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTGGTTCACCCTAGAGTaGAACCTTTCAGTTACACAA +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKWFTLE*NLSVTQ
Trigger: TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCA...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCCTTCCAGCTCCCCGTaGTGGGTGCACAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIPSSSP*WVHRKK
Trigger: CTTTTTCCTGTGCACCCACCACGGGGAGCTGGAAGG...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATCCGGAACGTAGTAGGTaGGGTTGCCCGCAATATGCA +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNPERSR*GCPQYA
Trigger: TGCATATTGCGGGCAACCCCACCTACTACGTTCCGG...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACGCCTGTGCCCGCAGGTaGAGCAATCCAGATGAAACT +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHACARR*SNPDET
Trigger: AGTTTCATCTGGATTGCTCCACCTGCGGGCACAGGC...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGGACATTCTCCCCTTTaGCGTCCTCAGGAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLGHSPL*RPQEGR
Trigger: TCTACCTTCCTGAGGACGCCAAAGGGGAGAATGTCC...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACGTCTCCAGCGAATCCTaGTGTTCCGGGTTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNVSSES*CSGLVL
Trigger: CAGCACTAACCCGGAACACCAGGATTCGCTGGAGAC...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGGTCTCCAGCGAATCCTaGTGTTCCGGGTTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQVSSES*CSGLVL
Trigger: CAGCACTAACCCGGAACACCAGGATTCGCTGGAGAC...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAGGTAAGAGGAGAGCCTaGAACTGCCAAAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTGKRRA*NCQSFQ
Trigger: CTGAAAGCTTTGGCAGTTCCAGGCTCTCCTCTTACC...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGACCAGGGCCTTACCACTaGCCAAGACACCACAACCAA +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRPGPYH*PRHHNQ
Trigger: TTGGTTGTGGTGTCTTGGCCAGTGGTAAGGCCCTGG...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAGTCGTGGCCACAGTATaGCTGAACATTTCCAAGGTA +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPVVATV*LNISKV
Trigger: TACCTTGGAAATGTTCAGCCATACTGTGGCCACGAC...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCTACTCCAGCTTCACCTaGTTGTCCATGTGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSYSSFT*LSMCGV
Trigger: CACCCCACACATGGACAACCAGGTGAAGCTGGAGTA...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTGCCAGGTAAGGCCGTaGTTGGTTGAGTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNCQVRP*LVEYSS
Trigger: GCTGGAGTACTCAACCAACCACGGCCTTACCTGGCA...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACGTGCCTTGGTACCCCTaGTCACACCTGCATATGCCA +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHVPWYP*SHLHMP
Trigger: TGGCATATGCAGGTGTGACCAGGGGTACCAAGGCAC...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACTGGCATTCAGTGCCTTaGTACCCCTGGTCACACCTG +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHWHSVP*YPWSHL
Trigger: CAGGTGTGACCAGGGGTACCAAGGCACTGAATGCCA...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGGGCAGCTTCTGGGTaGCATTCAGTGCCTTGGTAC +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQRAASG*HSVPWY
Trigger: GTACCAAGGCACTGAATGCCACCCAGAAGCTGCCCT...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTGGTCTTGGCAGCAGCTaGAAGCTCCAGATAGACAAA +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIGLGSS*KLQIDK
Trigger: TTTGTCTATCTGGAGCTTCCAGCTGCTGCCAAGACC...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTTGTGAGCTGCTCTCCTaGATCCATCGGAATCTGGTC +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLCELLS*IHRNLV
Trigger: GACCAGATTCCGATGGATCCAGGAGAGCAGCTCACA...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTCAGCCAGTTCCAACCTaGGCACCTGTTATCTTGTAC +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIQPVPT*APVILY
Trigger: GTACAAGATAACAGGTGCCCAGGTTGGAACTGGCTG...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACACAGACAGCCAATGGTTaGAGGAACACACTCTTCGGT +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTQTANG*RNTLFG
Trigger: ACCGAAGAGTGTGTTCCTCCAACCATTGGCTGTCTG...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACACGTAGTAGGTGCTGCTaGGGTGGTGCTCGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTRSRCC*GGARWS
Trigger: GCTCCACCGAGCACCACCCCAGCAGCACCTACTACG...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACGTCTTTGAGTTGGGTTaGAAGAGAGGTCTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYVFELG*KRGLGV
Trigger: GACCCCGAGACCTCTCTTCCAACCCAACTCAAAGAC...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTCTTTGAGTTGGGTTaGAAGAGAGGTCTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKVFELG*KRGLGV
Trigger: GACCCCGAGACCTCTCTTCCAACCCAACTCAAAGAC...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACAACCCCCACTGAAATaGAGAGCCATTCCCGACGCC +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTQPPLK*RAIPDA
Trigger: GGCGTCGGGAATGGCTCTCCATTTCAGTGGGGGTTG...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTACGGCAGATGGGACGATaGCAAGAGGTCATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVRQMGR*QEVMLF
Trigger: GAACAACATGACCTCTTGCCATCGTCCCATCTGCCG...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGCTTCCTTCCGGCAGATaGGACGATGGCAAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQLPSGR*DDGKRS
Trigger: TGACCTCTTGCCATCGTCCCATCTGCCGGAAGGAAG...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCATAGAGGTGAAAGGATaGATTGCCACAAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSIEVKG*IATKSC
Trigger: GCAGGATTTTGTGGCAATCCATCCTTTCACCTCTAT...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTGGTCACCACAAGAAGTaGCTTCACAACCCACCACAA +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIGHHKK*LHNPPQ
Trigger: TTGTGGTGGGTTGTGAAGCCACTTCTTGTGGTGACC...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCGAGGAAGGAAGGCACTaGGTCTGTACGAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIEEGRH*VCTSCQ
Trigger: CTGGCAGCTCGTACAGACCCAGTGCCTTCCTTCCTC...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGCCCGCTGCAGAGCTTaGGGCAAGCCTCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYARCRA*GKPLQC
Trigger: ACATTGGAGAGGCTTGCCCCAAGCTCTGCAGCGGGC...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTCGTCGCAGATGCAGATaGCACCGGTCGTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIRRRCR*HRSCSI
Trigger: GATACTGCACGACCGGTGCCATCTGCATCTGCGACG...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACGTCGCAGATGCAGATaGCACCGGTCGTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTRRRCR*HRSCSI
Trigger: GATACTGCACGACCGGTGCCATCTGCATCTGCGACG...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATGTGAAGTCCTTTGGCTaGTGCTGGGCGATGACATGC +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNVKSFG*CWAMTC
Trigger: GCATGTCATCGCCCAGCACCAGCCAAAGGACTTCAC...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACGTGAAGTCCTTTGGCTaGTGCTGGGCGATGACATGC +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNVKSFG*CWAMTC
Trigger: GCATGTCATCGCCCAGCACCAGCCAAAGGACTTCAC...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCACAATATGCAGGGAAATaGGCACCTCGCCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSQYAGK*APRPAP
Trigger: GGGAGCAGGGCGAGGTGCTCATTTCCCTGCATATTG...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAAACGACTTGTCTGTaGGCTGAATTGATGATCAAG +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITKTTCL*AELMIK
Trigger: CTTGATCATCAATTCAGCTCACAGACAAGTCGTTTT...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTCACATTCTGTACCAATaGCAGCTCCCAAGACATCCC +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSHILYQ*QLPRHP
Trigger: GGGATGTCTTGGGAGCTGTCATTGGTACAGAATGTG...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCTTCCACATCCCAGATTaGTGGAAAACTGTATCATGT +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITFHIPD*WKTVSC
Trigger: ACATGATACAGTTTTCCATCAATCTGGGATGTGGAA...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAGGTAAGCATTCAGTGTaGAGGAGGGACCAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKGKHSV*RRDQER
Trigger: GCGCTCCTGGTCCCTCCTTCACACTGAATGCTTACC...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTACTCCTTCACCAGGCTaGTCAGGGGCTCTGCACGTG +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYITPSPG*SGALHV
Trigger: CACGTGCAGAGCCCCTGATCAGCCTGGTGAAGGAGT...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAACACCTGCATATGCCATaGTCGCATGAGCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEHLHMP*SHEPCP
Trigger: TGGGCATGGCTCATGCGATCATGGCATATGCAGGTG...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATGATCCAGAAGAGATaGCACCACACCCTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQMIQKR*HHTLVL
Trigger: CAGAACAAGGGTGTGGTGTCATCTCTTCTGGATCAT...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGCAAATCTGGGTTTGCTaGAGTCTGAAAAGTACATCT +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKQIWVC*SLKSTS
Trigger: AGATGTACTTTTCAGACTTCAGCAAACCCAGATTTG...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATCCAAATATCATTGCTaGTGGTGTGGCAGCACAGAA +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPSKYHC*WCGSTE
Trigger: TTCTGTGCTGCCACACCATCAGCAATGATATTTGGA...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAAGGCACGTTTTTCTGTaGGCTGCTCTCCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKRHVFL*AALLDP
Trigger: TGGATCCAGGAGAGCAGCTCACAGAAAAACGTGCCT...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAACAGAAACACACTCCTaGAATGCAGTCCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKTETHS*NAVPMA
Trigger: GGCCATGGGGACTGCATTTCAGGAGTGTGTTTCTGT...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGTGATTGGGGACATTTaGCACACAGGTTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLVIGDI*HTGSLC
Trigger: GCACAAGGAACCTGTGTGTCAAATGTCCCCAATCAC...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTTTCCCAGGGCCATTaGAGTAGAGAGATTTGCCAT +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPFSQGH*SREICH
Trigger: ATGGCAAATCTCTCTACTTCAATGGCCCTGGGAAAA...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGCAAAGCCCACTGGGCTaGATGCTTCCCATGTTGCGG +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKQSPLG*MLPMLR
Trigger: CCGCAACATGGGAAGCATTCAGCCCAGTGGGCTTTG...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTGTGGAAGGTAGACAGTaGTCCGCTTCCAATTCTGGA +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSVEGRQ*SASNSG
Trigger: TCCAGAATTGGAAGCGGATCACTGTCTACCTTCCAC...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAACATCCAAGGGCACCCTaGGGCCAGTACAACATTATC +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKHPRAP*GQYNII
Trigger: GATAATGTTGTACTGGCCTCAGGGTGCCCTTGGATG...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAACAAATCCCTCGTCCTaGGCACATCCAAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSTNPSS*AHPRAP
Trigger: GGGTGCCCTTGGATGTGCTCAGGACGAGGGATTTGT...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGCACTGGATCCGCGGATaGGCTATCAGTCGAACAGCC +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKHWIRG*AISRTA
Trigger: GGCTGTTCGACTGATAGCTCATCCGCGGATCCAGTG...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATGGAGCATAAAGAGCTaGCGTGGCTGCTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEWSIKS*RGCCCG
Trigger: ACCACAGCAGCAGCCACGTCAGCTCTTTATGCTCCA...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGACGAGAGGCCACCGTTaGGAGAATACTGTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQTRGHR*ENTVGA
Trigger: TGCTCCTACAGTATTCTCTCAACGGTGGCCTCTCGT...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTCTGAAAAGGAACTCCTaGAGAAGACTCCACGAGAGG +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSLKRNS*RRLHER
Trigger: CCTCTCGTGGAGTCTTCTTCAGGAGTTCCTTTTCAG...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGATTGGTGCCTCCTGGGTaGAGCAGCCATTTCCTACTA +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRLVPPG*SSHFLL
Trigger: TAGTAGGAAATGGCTGCTTCACCCAGGAGGCACCAA...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAATGCTGGCCTTTTCAATaGAGACCAGGGCATCACCAG +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKCWPFQ*RPGHHQ
Trigger: CTGGTGATGCCCTGGTCTTCATTGAAAAGGCCAGCA...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTCTTGTTGAAAGTGTCTaGCACCAGGATCCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLLVESV*HQDPLQ
Trigger: CTGCAACGGATCCTGGTGTCAGACACTTTCAACAAG...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACACAGTCAGCCAGTTCTaGCTGGATGGAGCTCGATTG +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHTVSQF*LDGARL
Trigger: CAATCGAGCTCCATCCAGTCAGAACTGGCTGACTGT...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAACAGTCAGCCAGTTCTaGCTGGATGGAGCTCGATTG +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIITVSQF*LDGARL
Trigger: CAATCGAGCTCCATCCAGTCAGAACTGGCTGACTGT...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAACAGTCAGCCAGTTCTaGCTGGATGGAGCTCGATTG +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKTVSQF*LDGARL
Trigger: CAATCGAGCTCCATCCAGTCAGAACTGGCTGACTGT...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTGACTACAACCCCCACTaGAATGGAGAGCCATTCCCG +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIDYNPH*NGEPFP
Trigger: CGGGAATGGCTCTCCATTTCAGTGGGGGTTGTAGTC...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAATCCAGCATTACGGAATaGAGGTCACCACAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQSSITE*RSPQEV
Trigger: CACTTCTTGTGGTGACCTTCATTCCGTAATGCTGGA...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCTCCAGCTTGAGCTGTTaGCAGAGTTGTAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSSSLSC*QSCRWW
Trigger: CCACCATCTACAACTCTGTCAACAGCTCAAGCTGGA...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTTCCAGCTTGAGCTGTTaGCAGAGTTGTAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLSSLSC*QSCRWW
Trigger: CCACCATCTACAACTCTGTCAACAGCTCAAGCTGGA...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATACAGGCAGCTGGATGGTaGTTCTTTTCCAGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIQAAGW*FFSSLS
Trigger: GCTCAAGCTGGAAAAGAATCACCATCCAGCTGCCTG...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGCAGGCAGCTGGATGGTaGTTCTTTTCCAGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQQAAGW*FFSSLS
Trigger: GCTCAAGCTGGAAAAGAATCACCATCCAGCTGCCTG...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGACCCAGTTTGCCTCGGTaGCTCTTGCGGACTCAAAAT +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRPSLPR*LLRTQN
Trigger: ATTTTGAGTCCGCAAGAGTCACCGAGGCAAACTGGG...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAGCTGCTTGCCTGATCTaGCAGCCATTAAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTAACLI*QPLKYS
Trigger: ACTGTACTTTAATGGCTGTCAGATCAGGCAAGCAGC...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTGCTCCCCGTGGTGGGTaGACAGGAAAAAGAAGGGCG +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTAPRGG*TGKRRA
Trigger: CGCCCTTCTTTTTCCTGTGCACCCACCACGGGGAGC...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTGGGTTGCCCGCAATATaGAGGGAAATGAGCACCTCG +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIGLPAI*REMSTS
Trigger: CGAGGTGCTCATTTCCCTGCATATTGCGGGCAACCC...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCCACTGGAACCTCCAATaGTCTGTGATGCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSHWNLQ*SVMPEH
Trigger: GTGTTCAGGCATCACAGAGCATTGGAGGTTCCAGTG...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATACTGGCCCCGGTGTGTTaGTGTAGCCATGAAATTCAC +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIILAPVC*CSHEIH
Trigger: GTGAATTTCATGGCTACAGCAACACACCGGGGCCAG...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGTCAGCTAGATGTGGGTaGACAGTGACATCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRSARCG*TVTSVG
Trigger: TCCAACAGATGTCACTGTGCACCCACATCTAGCTGA...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGTGACGGCATTGCCATaGATAATCGCGCCACACTGT +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRVTALP*IIAPHC
Trigger: ACAGTGTGGCGCGATTATGCATGGCAATGCCGTCAC...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACGGAAGAAAAGCCAGTTaGCTGTGTCCACTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHGRKAS*LCPLGR
Trigger: TCGACCCAGTGGACACAGGCAACTGGCTTTTCTTCC...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTCAGGGGCTCTGCACGTaGTCAGAACAGATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIQGLCT*SEQICS
Trigger: GGAGCAAATCTGTTCTGAGCACGTGCAGAGCCCCTG...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTGGTCACACCTGCATATaGCATGATCGCATGAGCCAT +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSGHTCI*HDRMSH
Trigger: ATGGCTCATGCGATCATGGCATATGCAGGTGTGACC...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAGGACGCCCTCCTCTCTaGTGTCAGGCTTGTTGCATG +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGGRPPL*CQACCM
Trigger: CATGCAACAAGCCTGACAGCAGAGAGGAGGGCGTCC...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATTCGCATCCTTTGCCTaGAGAAGCCGGGTAACAGCC +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEFASFA*RSRVTA
Trigger: GGCTGTTACCCGGCTTCTGCAGGCAAAGGATGCGAA...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTCGTTTTTCTGTGAGCTaGTCTCCTGGATCCATCGGA +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSRFSVS*SPGSIG
Trigger: TCCGATGGATCCAGGAGAGCAGCTCACAGAAAAACG...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAACACACTCCTGAAATaGAGTCCCCATGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHNTLLK*SPHGHC
Trigger: GCAGTGGCCATGGGGACTGCATTTCAGGAGTGTGTT...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACTTGCCACCATCGAAATaGCGTTGCAGGTGTCTTCGC +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHLPPSK*RCRCLR
Trigger: GCGAAGACACCTGCAACGGCATTTCGATGGTGGCAA...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCTTCCCATGTTGCGGTTaGCACCATCGAAATGCCGTT +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSFPCCG*HHRNAV
Trigger: AACGGCATTTCGATGGTGGCAACCGCAACATGGGAA...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAATCTTCGGTGACAAGATaGCAGTCCTTGCCATTGTTC +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQSSVTR*QSLPLF
Trigger: GAACAATGGCAAGGACTGGCATCTTGTCACCGAAGA...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAGTGCTGCTGGGGTGGTaGTCGGTGGAGCATAAAGAG +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGVLLGW*SVEHKE
Trigger: CTCTTTATGCTCCACCGAGCACCACCCCAGCAGCAC...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGACCAGGGCAATGTACCTaGCCACATTGCTGGAATTGC +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRPGQCT*PHCWNC
Trigger: GCAATTCCAGCAATGTGGGCAGGTACATTGCCCTGG...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTACACGGGCATCTTGGTaGCTCCTGGGTGAAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYITRASW*LLGEAA
Trigger: GGCTGCTTCACCCAGGAGGCACCAAGATGCCCGTGT...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATCTATTGCCCATGTCTaGTGCTTGTCAAAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPSIAHV*CLSKGA
Trigger: AGCTCCTTTTGACAAGCAGCAGACATGGGCAATAGA...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGCACTGCACATGTCTATaGAGCCATCCCCGATATAGA +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRHCTCL*SHPRYR
Trigger: TCTATATCGGGGATGGCTGCATAGACATGTGCAGTG...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCACGCAGTTTCCCTGGATaGATCTCCCATGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSRSFPG*ISHGHC
Trigger: GCAGTGGCCATGGGAGATGCATCCAGGGAAACTGCG...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCGCAGTTTCCCTGGATaGATCTCCCATGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIRSFPG*ISHGHC
Trigger: GCAGTGGCCATGGGAGATGCATCCAGGGAAACTGCG...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACCCCGTCCATCATGACTaGCACAGAGCATCACACCAT +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHPVHHD*HRASHH
Trigger: ATGGTGTGATGCTCTGTGGCAGTCATGATGGACGGG...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACCCCGTCCATCATGACTaGCACAGAGCATCACACCAT +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNPVHHD*HRASHH
Trigger: ATGGTGTGATGCTCTGTGGCAGTCATGATGGACGGG...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATCTCCATGGCCCCTaGAGTTGTCCAAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHNLHGP*SCPSIQ
Trigger: CTGGATGCTTGGACAACTGCAGGGGCCATGGAGATT...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAATCTCCATGGCCCCTaGAGTTGTCCAAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNNLHGP*SCPSIQ
Trigger: CTGGATGCTTGGACAACTGCAGGGGCCATGGAGATT...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACATGCGCCCCCAGTATTaGAGGAACTTTGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNMRPQY*RNFAPR
Trigger: TCGAGGTGCAAAGTTCCTGCAATACTGGGGGCGCAT...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACTGTTCTCACTACCGATaGGCCCCCAGTATTGCAGGA +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHCSHYR*APSIAG
Trigger: TCCTGCAATACTGGGGGCGCATCGGTAGTGAGAACA...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACCAAAATGTTGTCCAGTaGCCACTGAGCACGCTCCAC +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNQNVVQ*PLSTLH
Trigger: GTGGAGCGTGCTCAGTGGGCACTGGACAACATTTTG...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGTACACGTGGTCAATTaGCCAGCTTTGCTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRVHVVN*PALLLS
Trigger: ACTGAGAAGCAAAGCTGGGCAATTGACCACGTGTAC...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTAGTATCCGTGCCCGCTaGAGAGCTTGGGGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCASIRAR*RAWGKP
Trigger: AGGCTTGCCCCAAGCTCTGCAGCGGGCACGGATACT...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATGGTCTCCCAGTTTaGCTCGGTGACTCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHNGLPV*LGDSCG
Trigger: TCCGCAAGAGTCACCGAGGCAAACTGGGAGACCATT...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATGTCCGTCTGCGACATaGTCCCAATTTGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPCPSAT*SQFAKQ
Trigger: TTGTTTTGCAAATTGGGAGCATGTCGCAGACGGACA...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACACTCAGGTCACTGTTaGAGCTGTCCGTCTGCGACA +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTHSGHC*SCPSAT
Trigger: TGTCGCAGACGGACAGCTGCAACAGTGACCTGAGTG...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGTTGTTGACGCTGTATTaGAGCAGCACTGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKLLTLY*SSTALS
Trigger: GGACAAGGCAGTGCTGCTGCAATACAGCGTCAACAA...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTTGCTGGGCGATGACATaGCAGGTGATCCCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTICWAMT*QVIPLL
Trigger: CAACAACGGGATCACCTGGCATGTCATCGCCCAGCA...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAAAGTCCTTTGGCTGGTaGTGGGCGATGACATGCCAG +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEKSFGW*WAMTCQ
Trigger: CTGGCATGTCATCGCCCAGCACCAGCCAAAGGACTT...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACGACTCCTTTCATCCGTaGCTCCAGGGGGACATTGTA +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNDSFHP*LQGDIV
Trigger: TACAATGTCCCCCTGGAGGCACGGATGAAAGGAGTC...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATGACTCCTTTCATCCGTaGCTCCAGGGGGACATTGTA +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNDSFHP*LQGDIV
Trigger: TACAATGTCCCCCTGGAGGCACGGATGAAAGGAGTC...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCCATTGTGGCGTGGTTaGCACCAGCGCAGTAAGACT +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIPLWRG*HQRSKT
Trigger: AGTCTTACTGCGCTGGTGGCAACCACGCCACAATGG...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATCGCTCATTCAGTTTTaGAGACGCCGGGACGGAGGA +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYESLIQF*RRRDGG
Trigger: TCCTCCGTCCCGGCGTCTCCAAAACTGAATGAGCGA...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTTCGCTCATTCAGTTTTaGAGACGCCGGGACGGAGGA +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTISLIQF*RRRDGG
Trigger: TCCTCCGTCCCGGCGTCTCCAAAACTGAATGAGCGA...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATCCTTCCAGCTCCCCGTaGTGGGTGCACAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYPSSSP*WVHRKK
Trigger: CTTTTTCCTGTGCACCCACCACGGGGAGCTGGAAGG...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCCGGAACGTAGTAGGTaGGGTTGCCCGCAATATGCA +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIPERSR*GCPQYA
Trigger: TGCATATTGCGGGCAACCCCACCTACTACGTTCCGG...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGCAAATCCGAAAGCACTaGAACCTCCAATGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRQIRKH*NLQCSV
Trigger: CACAGAGCATTGGAGGTTCCAGTGCTTTCGGATTTG...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCTTCCATGGAAATAAATaGAGTTCCCATCTGACTGAC +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITFHGNK*SSHLTD
Trigger: GTCAGTCAGATGGGAACTCCATTTATTTCCATGGAA...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTGTGCTGTGGGGGAGGTaGGGTCCAGCACAGATCTCA +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTVLWGR*GPAQIS
Trigger: TGAGATCTGTGCTGGACCCCACCTCCCCCACAGCAC...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTGTGCTGTGGGGGAGGTaGGGTCCAGCACAGATCTCA +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIVLWGR*GPAQIS
Trigger: TGAGATCTGTGCTGGACCCCACCTCCCCCACAGCAC...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAGGTAAGAGGAGAGCCTaGAACTGCCAAAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVGKRRA*NCQSFQ
Trigger: CTGAAAGCTTTGGCAGTTCCAGGCTCTCCTCTTACC...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACCAGGGCCTTACCACTaGCCAAGACACCACAACCAA +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTPGPYH*PRHHNQ
Trigger: TTGGTTGTGGTGTCTTGGCCAGTGGTAAGGCCCTGG...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAGTCGTGGCCACAGTATaGCTGAACATTTCCAAGGTA +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQVVATV*LNISKV
Trigger: TACCTTGGAAATGTTCAGCCATACTGTGGCCACGAC...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTGTCGTGGCCACAGTATaGCTGAACATTTCCAAGGTA +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIVVATV*LNISKV
Trigger: TACCTTGGAAATGTTCAGCCATACTGTGGCCACGAC...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCCTGGTTGTCCATGTGTaGGGTGTATTTCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSLVVHV*GVFLAT
Trigger: TGTGGCCAGAAATACACCCCACACATGGACAACCAG...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACGGAAGGCATTCTTCTTaGACGAGGTGCCAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNGRHSS*TRCQVR
Trigger: CCTTACCTGGCACCTCGTCCAAGAAGAATGCCTTCC...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGGCCCACTGCACATGTTaGGGCACTGCTGCCCAATGT +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWAHCTC*GTAAQC
Trigger: ACATTGGGCAGCAGTGCCCCAACATGTGCAGTGGGC...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTGCCCACTGCACATGTTaGGGCACTGCTGCCCAATGT +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIAHCTC*GTAAQC
Trigger: ACATTGGGCAGCAGTGCCCCAACATGTGCAGTGGGC...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAACGGAAGGGCAGCTTCTaGGTGGCATTCAGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKRKGSF*VAFSAL
Trigger: CAAGGCACTGAATGCCACCCAGAAGCTGCCCTTCCG...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCGGAAGGGCAGCTTCTaGGTGGCATTCAGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPRKGSF*VAFSAL
Trigger: CAAGGCACTGAATGCCACCCAGAAGCTGCCCTTCCG...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAGCTAGCAGGTGCCACTaGATGCCCCCATTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKASRCH*MPPLLL
Trigger: CAGCAACAATGGGGGCATCCAGTGGCACCTGCTAGC...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTGCTAGCAGGTGCCACTaGATGCCCCCATTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIASRCH*MPPLLL
Trigger: CAGCAACAATGGGGGCATCCAGTGGCACCTGCTAGC...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACACTGTGTGATACATGGTaGGCTCACTTAGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTLCDTW*AHLVLW
Trigger: CCAGAGAACTAAGTGAGCCCACCATGTATCACACAG...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAACTGTGTGATACATGGTaGGCTCACTTAGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQLCDTW*AHLVLW
Trigger: CCAGAGAACTAAGTGAGCCCACCATGTATCACACAG...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTGGATCCATCGGAATCTaGTCTTGCTGGATGCAAGAG +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSGSIGI*SCWMQE
Trigger: CTCTTGCATCCAGCAAGACCAGATTCCGATGGATCC...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAATGTGAGCTGCTCTCCTaGATCCATCGGAATCTGGTC +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKCELLS*IHRNLV
Trigger: GACCAGATTCCGATGGATCCAGGAGAGCAGCTCACA...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAGGCCACTGCAGTAACTaGGACAAGGCTCGGATATGT +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKGHCSN*DKARIC
Trigger: ACATATCCGAGCCTTGTCCCAGTTACTGCAGTGGCC...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGAATGGAAATGATCTGTaGTTCCAGGAAGGACATGAA +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKNGNDL*FQEGHE
Trigger: TTCATGTCCTTCCTGGAACCACAGATCATTTCCATT...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAATGGAGCTGTACACTGTaGGAGTTGCTGAAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKWSCTL*ELLKGL
Trigger: CAAGCCCTTCAGCAACTCCCACAGTGTACAGCTCCA...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGTGGAGCTGTACACTGTaGGAGTTGCTGAAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQWSCTL*ELLKGL
Trigger: CAAGCCCTTCAGCAACTCCCACAGTGTACAGCTCCA...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTAATGGCCCATGTCACTaGCTGAGAGCCGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPNGPCH*LRAGRV
Trigger: TACCCTGCCGGCTCTCAGCCAGTGACATGGGCCATT...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGAATGGCCCATGTCACTaGCTGAGAGCCGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWNGPCH*LRAGRV
Trigger: TACCCTGCCGGCTCTCAGCCAGTGACATGGGCCATT...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAAATGGCCCATGTCACTaGCTGAGAGCCGGCAGGGTA +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGNGPCH*LRAGRV
Trigger: TACCCTGCCGGCTCTCAGCCAGTGACATGGGCCATT...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATGTAGACATTATCAATaGCCCATGTCACTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPCRHYQ*PMSLAE
Trigger: CTCAGCCAGTGACATGGGCCATTGATAATGTCTACA...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACTGGATGCATCTCCCATaGCCACTGCACATGTCTATG +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYWMHLP*PLHMSM
Trigger: CATAGACATGTGCAGTGGCCATGGGAGATGCATCCA...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACAGACGCAGTTTCCCTaGATGCATCTCCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTQTQFP*MHLPWP
Trigger: TGGCCATGGGAGATGCATCCAGGGAAACTGCGTCTG...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAGTCTTTGAGTTGGGTTaGAAGAGAGGTCTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKVFELG*KRGLGV
Trigger: GACCCCGAGACCTCTCTTCCAACCCAACTCAAAGAC...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACGTCTTTGAGTTGGGTTaGAAGAGAGGTCTCGGGGTC +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNVFELG*KRGLGV
Trigger: GACCCCGAGACCTCTCTTCCAACCCAACTCAAAGAC...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGACAACCCCCACTGAAATaGAGAGCCATTCCCGACGCC +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGQPPLK*RAIPDA
Trigger: GGCGTCGGGAATGGCTCTCCATTTCAGTGGGGGTTG...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGCGGCAGATGGGACGATaGCAAGAGGTCATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQRQMGR*QEVMLF
Trigger: GAACAACATGACCTCTTGCCATCGTCCCATCTGCCG...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAGGTCACCACAAGAAGTaGCTTCACAACCCACCACAA +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVGHHKK*LHNPPQ
Trigger: TTGTGGTGGGTTGTGAAGCCACTTCTTGTGGTGACC...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACGAGCAGTCATCACCTTaGAAGCTCTCGTCGCAGATG +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHEQSSP*KLSSQM
Trigger: CATCTGCGACGAGAGCTTCCAAGGTGATGACTGCTC...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTCCTTGCCAACCACTTaGAGCCATCAGTCCGAACCC +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFISLPTT*SHQSEP
Trigger: GGGTTCGGACTGATGGCTCCAAGTGGTTGGCAAGGA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681034.1
CDS-3UTR TCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTCAATATGCAGGGAAATaGGCACCTCGCCCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTQYAGK*APRPAP
Trigger: GGGAGCAGGGCGAGGTGCTCATTTCCCTGCATATTG...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCGATGTGGGTGCACAGTaGCATCTGTTGGAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIDVGAQ*HLLELL
Trigger: AAGGAGCTCCAACAGATGTCACTGTGCACCCACATC...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCACTAATTTTCTCTAGCTaGATCCAGTCCGCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPLIFSS*IQSAEL
Trigger: TAACTCTGCGGACTGGATTCAGCTAGAGAAAATTAG...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAAATGGAGTTCCCATCTaGCTGACAGCTATGCTTAAC +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQNGVPI*LTAMLN
Trigger: GTTAAGCATAGCTGTCAGTCAGATGGGAACTCCATT...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGGTGGTGGCAAAATTaGACTCGCTGCCTTCATTTC +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSWWWQN*TRCLHF
Trigger: GAAATGAAGGCAGCGAGTTCAATTTTGCCACCACCA...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGACACATTCTGTACCAATaGCAGCTCCCAAGACATCCC +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRHILYQ*QLPRHP
Trigger: GGGATGTCTTGGGAGCTGTCATTGGTACAGAATGTG...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATACACATTCTGTACCAATaGCAGCTCCCAAGACATCCC +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIHILYQ*QLPRHP
Trigger: GGGATGTCTTGGGAGCTGTCATTGGTACAGAATGTG...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTTCCTCTCTCCATCTTTaGGGAAGACCATTGATAAGC +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAISSLHL*GRPLIS
Trigger: GCTTATCAATGGTCTTCCTCAAAGATGGAGAGAGGA...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAAGACGGAACCTTATATaGGGAATAGGAAAGGGTATC +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPRRNLI*GIGKGI
Trigger: GATACCCTTTCCTATTCCTCATATAAGGTTCCGTCT...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATTGGTAGCAGGAGTCTaGAGTTCAGGATTGATGACC +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVLVAGV*SSGLMT
Trigger: GGTCATCAATCCTGAACTTCAGACTCCTGCTACCAA...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACTTGGTAGCAGGAGTCTaGAGTTCAGGATTGATGACC +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYLVAGV*SSGLMT
Trigger: GGTCATCAATCCTGAACTTCAGACTCCTGCTACCAA...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAACACTGTTACCAGGCTaGTGCGTTCCACATCCCAGA +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYETLLPG*CVPHPR
Trigger: TCTGGGATGTGGAACGCATCAGCCTGGTAACAGTGT...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCACAGAATTTGAGACATaGCGGGCCAATATAAACATT +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITTEFET*RANINI
Trigger: AATGTTTATATTGGCCCGTCATGTCTCAAATTCTGT...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAGCCGCCCATCTTTGTTaGAAACCAGGGCCTTACCAC +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSAAHLC*KPGPYH
Trigger: GTGGTAAGGCCCTGGTTTTCAACAAAGATGGGCGGC...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTAAAGATGTAATTAGCTaGCGCCGCCCATCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIKDVIS*RRPSLL
Trigger: CAACAAAGATGGGCGGCGTCAGCTAATTACATCTTT...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATTCCCCAGTCTCAGTGTaGACTGGAGAAACCTGGATT +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNSPVSV*TGETWI
Trigger: AATCCAGGTTTCTCCAGTTCACACTGAGACTGGGGA...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAACGGTTGCCACCATCTaGACTGAATTCCAAACTGCT +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVTVATI*TEFQTA
Trigger: AGCAGTTTGGAATTCAGTTCAGATGGTGGCAACCGT...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTACGGTTGCCACCATCTaGACTGAATTCCAAACTGCT +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLTVATI*TEFQTA
Trigger: AGCAGTTTGGAATTCAGTTCAGATGGTGGCAACCGT...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGCACATAGCGCATACTTaGGGCAAGTTTAGAATCTCC +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRHIAHT*GKFRIS
Trigger: GGAGATTCTAAACTTGCCTCAAGTATGCGCTATGTG...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGTGCTCCTATCTGCATTaGTTGTGTTTCCACATAGCG +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRCSYLH*LCFHIA
Trigger: CGCTATGTGGAAACACAATCAATGCAGATAGGAGCA...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAAAGGCCGTGGTTGGTTaGGTACTCCAGCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSKAVVG*VLQLHL
Trigger: CAGGTGAAGCTGGAGTACTCAACCAACCACGGCCTT...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAAAGGCCGTGGTTGGTTaGGTACTCCAGCTTCACCTG +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGKAVVG*VLQLHL
Trigger: CAGGTGAAGCTGGAGTACTCAACCAACCACGGCCTT...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGCCATTGTTGCTGTACTaGAGGAGGACGCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWPLLLY*RRTPSS
Trigger: AGAGGAGGGCGTCCTCCTTCAGTACAGCAACAATGG...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGACCATTGTTGCTGTACTaGAGGAGGACGCCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGPLLLY*RRTPSS
Trigger: AGAGGAGGGCGTCCTCCTTCAGTACAGCAACAATGG...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGCTGGAGCAGTACTGCTaGATTGATTGGCACAACCTA +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKLEQYC*IDWHNL
Trigger: TAGGTTGTGCCAATCAATTCAGCAGTACTGCTCCAG...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGATCAAAGTCCCCTGTGTaGTACATGGTGGGCTCACTT +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRSKSPV*YMVGSL
Trigger: AAGTGAGCCCACCATGTATCACACAGGGGACTTTGA...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACTCAAAGTCCCCTGTGTaGTACATGGTGGGCTCACTT +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHSKSPV*YMVGSL
Trigger: AAGTGAGCCCACCATGTATCACACAGGGGACTTTGA...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGTGATTGGGGACATTTaGCACACAGGTTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRVIGDI*HTGSLC
Trigger: GCACAAGGAACCTGTGTGTCAAATGTCCCCAATCAC...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATGTACCACAGAGGGCTaGGCTTCCCCTCAAACCTAT +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYECTTEG*ASPQTY
Trigger: ATAGGTTTGAGGGGAAGCTCAGCCCTCTGTGGTACA...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTGTAGATGCTGACACATaGAAATCCCAGGTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSVDADT*KSQVSA
Trigger: TGCTGAGACCTGGGATTTTCATGTGTCAGCATCTAC...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAGTAGATGCTGACACATaGAAATCCCAGGTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVVDADT*KSQVSA
Trigger: TGCTGAGACCTGGGATTTTCATGTGTCAGCATCTAC...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATGTGGAAGGTAGACAGTaGTCCGCTTCCAATTCTGGA +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNVEGRQ*SASNSG
Trigger: TCCAGAATTGGAAGCGGATCACTGTCTACCTTCCAC...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTACAAATCCCTCGTCCTaGGCACATCCAAGGGCACCC +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYITNPSS*AHPRAP
Trigger: GGGTGCCCTTGGATGTGCTCAGGACGAGGGATTTGT...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATGTAACAGAATAGAGTaGGATCTCTCTGGGGTACTT +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPCNRIE*DLSGVL
Trigger: AAGTACCCCAGAGAGATCTCACTCTATTCTGTTACA...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTCAGGTGCCCCCTTTaGAGAATATGGACAATAAAG +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPFRCPL*RIWTIK
Trigger: CTTTATTGTCCATATTCTTCAAAGGGGGCACCTGAA...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCAACAAACACCATAGCTaGATCTTCTTCAGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSNKHHS*IFFRCP
Trigger: GGGGCACCTGAAGAAGATTCAGCTATGGTGTTTGTT...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCGCCCCGAAGTCCCTTaGAAATTCCAGTCTCACTGG +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPRPEVP*KFQSHW
Trigger: CCAGTGAGACTGGAATTTTCAAGGGACTTCGGGGCG...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTATCCCTGGTACCATCTaGAACGGACAGATCCACAAA +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSIPGTI*NGQIHK
Trigger: TTTGTGGATCTGTCCGTTTCAGATGGTACCAGGGAT...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGTTTACAGGTTGGACCTaGGTAGCCAGGGTCACATAT +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKFTGWT*VARVTY
Trigger: ATATGTGACCCTGGCTACTCAGGTCCAACCTGTAAA...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACCTTGTTGAAAGTGTCTaGCACCAGGATCCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNLVESV*HQDPLQ
Trigger: CTGCAACGGATCCTGGTGTCAGACACTTTCAACAAG...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAGACTACAACCCCCACTaGAATGGAGAGCCATTCCCG +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKDYNPH*NGEPFP
Trigger: CGGGAATGGCTCTCCATTTCAGTGGGGGTTGTAGTC...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTATGGCCCAGTCGTTCTaGTCCAGGCCGTCATGTCTT +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIMAQSF*SRPSCL
Trigger: AAGACATGACGGCCTGGATCAGAACGACTGGGCCAT...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTTGGTCAGCAGAGCCTaGGATGAGGACATTGTCAAT +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSLVSRA*DEDIVN
Trigger: ATTGACAATGTCCTCATCTCAGGCTCTGCTGACCAA...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGTTGGTCAGCAGAGCCTaGGATGAGGACATTGTCAAT +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKLVSRA*DEDIVN
Trigger: ATTGACAATGTCCTCATCTCAGGCTCTGCTGACCAA...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGCCCACTGCATGTCTaGGTACTTCTGATAGAACCT +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVCPLHV*VLLIEP
Trigger: AGGTTCTATCAGAAGTACTCAGACATGCAGTGGGCA...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACCCAATTGGCTGGGATTaGTTTCTGCTCCACCAATCA +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYPIGWD*FLLHQS
Trigger: TGATTGGTGGAGCAGAAATCAATCCCAGCCAATTGG...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCCCAATTGGCTGGGATTaGTTTCTGCTCCACCAATCA +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSPIGWD*FLLHQS
Trigger: TGATTGGTGGAGCAGAAATCAATCCCAGCCAATTGG...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGTCCAGCATTACGGAATaGAGGTCACCACAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKSSITE*RSPQEV
Trigger: CACTTCTTGTGGTGACCTTCATTCCGTAATGCTGGA...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATCCAGCATTACGGAATaGAGGTCACCACAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVSSITE*RSPQEV
Trigger: CACTTCTTGTGGTGACCTTCATTCCGTAATGCTGGA...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGTCCAGCTTGAGCTGTTaGCAGAGTTGTAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQSSLSC*QSCRWW
Trigger: CCACCATCTACAACTCTGTCAACAGCTCAAGCTGGA...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAGATTCTTTTCCAGCTTaGGCTGTTGACAGAGTTGTA +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPDSFPA*AVDRVV
Trigger: TACAACTCTGTCAACAGCTCAAGCTGGAAAAGAATC...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTCAGGCAGCTGGATGGTaGTTCTTTTCCAGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIQAAGW*FFSSLS
Trigger: GCTCAAGCTGGAAAAGAATCACCATCCAGCTGCCTG...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTCCCAGTTTGCCTCGGTaGCTCTTGCGGACTCAAAAT +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIPSLPR*LLRTQN
Trigger: ATTTTGAGTCCGCAAGAGTCACCGAGGCAAACTGGG...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAGGGTTGCCCGCAATATaGAGGGAAATGAGCACCTCG +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLGLPAI*REMSTS
Trigger: CGAGGTGCTCATTTCCCTGCATATTGCGGGCAACCC...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTCGTAGTAGGTGGGGTTaGCCGCAATATGCAGGGAAA +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIRSRWG*PQYAGK
Trigger: TTTCCCTGCATATTGCGGGCAACCCCACCTACTACG...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATACACTGGAACCTCCAATaGTCTGTGATGCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIHWNLQ*SVMPEH
Trigger: GTGTTCAGGCATCACAGAGCATTGGAGGTTCCAGTG...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTAATTCACACAGCCTGTaGCCGCAGGTGGAGCAATCC +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSINSHSL*PQVEQS
Trigger: GGATTGCTCCACCTGCGGGCACAGGCTGTGTGAATT...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGAATTCACACAGCCTGTaGCCGCAGGTGGAGCAATCC +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWNSHSL*PQVEQS
Trigger: GGATTGCTCCACCTGCGGGCACAGGCTGTGTGAATT...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCTGGCCCCGGTGTGTTaGTGTAGCCATGAAATTCAC +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFILAPVC*CSHEIH
Trigger: GTGAATTTCATGGCTACAGCAACACACCGGGGCCAG...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCTCAGCTAGATGTGGGTaGACAGTGACATCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSSARCG*TVTSVG
Trigger: TCCAACAGATGTCACTGTGCACCCACATCTAGCTGA...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATGGGAATGTCTGGGATaGCATCTCACAAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSWECLG*HLTSWA
Trigger: GGCCCAGCTTGTGAGATGGCATCCCAGACATTCCCA...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGTGGGAATGTCTGGGATaGCATCTCACAAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKWECLG*HLTSWA
Trigger: GGCCCAGCTTGTGAGATGGCATCCCAGACATTCCCA...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTTCTTCTTGGACGAGGTaGCAGGTAAGGCCGTGGTTG +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSISSWTR*QVRPWL
Trigger: CAACCACGGCCTTACCTGGCACCTCGTCCAAGAAGA...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGCTGCCCAATGTAAATaGTGTCCAAAGCCCACTCGT +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRAAQCK*CPKPTR
Trigger: ACGAGTGGGCTTTGGACAGCATTTACATTGGGCAGC...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGGCTGCCCAATGTAAATaGTGTCCAAAGCCCACTCGT +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQAAQCK*CPKPTR
Trigger: ACGAGTGGGCTTTGGACAGCATTTACATTGGGCAGC...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAACCCCTGGTCACACCTaGATATGCCATGATCGCATG +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYETPGHT*ICHDRM
Trigger: CATGCGATCATGGCATATGCAGGTGTGACCAGGGGT...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTCTGGGTGGCATTCAGTaGCTTGGTACCCCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYILGGIQ*LGTPGH
Trigger: GTGACCAGGGGTACCAAGGCACTGAATGCCACCCAG...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACACTGGGTGGCATTCAGTaGCTTGGTACCCCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTLGGIQ*LGTPGH
Trigger: GTGACCAGGGGTACCAAGGCACTGAATGCCACCCAG...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTCTGGGTGGCATTCAGTaGCTTGGTACCCCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTLGGIQ*LGTPGH
Trigger: GTGACCAGGGGTACCAAGGCACTGAATGCCACCCAG...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTCCCCCAATAACTTCTTaGCAGTCAGACTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIPPITS*QSDSQP
Trigger: TGGCTGGGAGTCTGACTGGCAAGAAGTTATTGGGGG...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGGGATGCCCCCATTGTTaGTGTACTGAAGGAGGACGC +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKGCPHC*CTEGGR
Trigger: GCGTCCTCCTTCAGTACAGCAACAATGGGGGCATCC...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTATCTCTGCTAGCAGGTaGCACTGGATGCCCCCATTG +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIISASR*HWMPPL
Trigger: CAATGGGGGCATCCAGTGGCACCTGCTAGCAGAGAT...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGGATGATGTCATCGACTaGCCACTGGTCATAGTCCTC +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQDDVID*PLVIVL
Trigger: GAGGACTATGACCAGTGGGCAGTCGATGACATCATC...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGTTCGCATCCTTTGCCTaGAGAAGCCGGGTAACAGCC +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPFASFA*RSRVTA
Trigger: GGCTGTTACCCGGCTTCTGCAGGCAAAGGATGCGAA...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTTCCTTCGCATCCTTTaGCTGCAGAAGCCGGGTAAC +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIFLRIL*LQKPGN
Trigger: GTTACCCGGCTTCTGCAGGCAAAGGATGCGAAGGAA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAATCTGGTCTTGCTGGATaGAAGAGACCTTGGAATAAC +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQSGLAG*KRPWNN
Trigger: GTTATTCCAAGGTCTCTTGCATCCAGCAAGACCAGA...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAAGTCCCCATGGCCACTaGAGTAACTGGGACAAGGCT +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGSPHGH*SNWDKA
Trigger: AGCCTTGTCCCAGTTACTGCAGTGGCCATGGGGACT...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTCCATCGAAATGCCGTTaGAGGTGTCTTCGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPPSKCR*RCLRVL
Trigger: CAGGACGCGAAGACACCTGCAACGGCATTTCGATGG...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCACCATCGAAATGCCGTTaGAGGTGTCTTCGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSPSKCR*RCLRVL
Trigger: CAGGACGCGAAGACACCTGCAACGGCATTTCGATGG...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGACCATCGAAATGCCGTTaGAGGTGTCTTCGCGTCCTG +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGPSKCR*RCLRVL
Trigger: CAGGACGCGAAGACACCTGCAACGGCATTTCGATGG...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGTTCCCATGTTGCGGTTaGCACCATCGAAATGCCGTT +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQFPCCG*HHRNAV
Trigger: AACGGCATTTCGATGGTGGCAACCGCAACATGGGAA...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTTCTTCGGTGACAAGATaGCAGTCCTTGCCATTGTTC +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLSSVTR*QSLPLF
Trigger: GAACAATGGCAAGGACTGGCATCTTGTCACCGAAGA...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATCTTCGGTGACAAGATaGCAGTCCTTGCCATTGTTC +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVSSVTR*QSLPLF
Trigger: GAACAATGGCAAGGACTGGCATCTTGTCACCGAAGA...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACACAGATCCACAAAGGTaGAGCTTCCCAAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNTDPQR*SFPKCT
Trigger: CGTGCACTTTGGGAAGCTGCACCTTTGTGGATCTGT...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTCCAGGGCAATGTACCTaGCCACATTGCTGGAATTGC +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIPGQCT*PHCWNC
Trigger: GCAATTCCAGCAATGTGGGCAGGTACATTGCCCTGG...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCCATTCTCAGACGGTTaGCACCAGCGAAGGCGAGTA +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPPFSDG*HQRRRV
Trigger: TACTCGCCTTCGCTGGTGGCAACCGTCTGAGAATGG...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGATTGCCCATGTCTGCTaGTTGTCAAAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKIAHVC*LSKGAG
Trigger: ACCAGCTCCTTTTGACAAGCAGCAGACATGGGCAAT...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACATTGCCCATGTCTGCTaGTTGTCAAAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYIAHVC*LSKGAG
Trigger: ACCAGCTCCTTTTGACAAGCAGCAGACATGGGCAAT...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACTCCCCCAAAATAGAGTaGAGTGTCCTCGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYSPKIE*SVLGKN
Trigger: ATTCTTGCCGAGGACACTGCACTCTATTTTGGGGGA...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGCTGATCACAAAAGGCTaGCACCAGCGAAGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQLITKG*HQRSRV
Trigger: AACTCGACTTCGCTGGTGGCAGCCTTTTGTGATCAG...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTCAAAATGTTGTCCAGTaGCCACTGAGCACGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIQNVVQ*PLSTLH
Trigger: GTGGAGCGTGCTCAGTGGGCACTGGACAACATTTTG...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTGGTGAAAGGATGGATTaGCACAAAATCCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSGERMD*HKILLS
Trigger: GGACAGCAGGATTTTGTGGCAATCCATCCTTTCACC...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGACCACAATTTTAAACTaGATCATGTATCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKTTILN*IMYPGC
Trigger: ACAGCCAGGATACATGATGCAGTTTAAAATTGTGGT...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTACACGTGGTCAATTaGCCAGCTTTGCTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKVHVVN*PALLLS
Trigger: ACTGAGAAGCAAAGCTGGGCAATTGACCACGTGTAC...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTCAGAGGCTTGGTAGCTaGTTGCCTGATCTGACAGCC +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPQRLGS*LPDLTA
Trigger: GGCTGTCAGATCAGGCAAGCAGCTACCAAGCCTCTG...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACTTGTTGACGCTGTATTaGAGCAGCACTGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHLLTLY*SSTALS
Trigger: GGACAAGGCAGTGCTGCTGCAATACAGCGTCAACAA...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGTGCTGGGCGATGACATaGCAGGTGATCCCGTTGTTG +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKCWAMT*QVIPLL
Trigger: CAACAACGGGATCACCTGGCATGTCATCGCCCAGCA...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGTCGCTCATTCAGTTTTaGAGACGCCGGGACGGAGGA +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKSLIQF*RRRDGG
Trigger: TCCTCCGTCCCGGCGTCTCCAAAACTGAATGAGCGA...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTCCAGCTCCCCGTGGTaGGTGCACAGGAAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPSSSPW*VHRKKK
Trigger: CTTCTTTTTCCTGTGCACCCACCACGGGGAGCTGGA...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCCGGAACGTAGTAGGTaGGGTTGCCCGCAATATGCA +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIPERSR*GCPQYA
Trigger: TGCATATTGCGGGCAACCCCACCTACTACGTTCCGG...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTAACTGGTTACCAAACTaGTGGTCAGACATGATCCCA +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAINWLPN*WSDMIP
Trigger: TGGGATCATGTCTGACCACCAGTTTGGTAACCAGTT...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTGCCTGTGCCCGCAGGTaGAGCAATCCAGATGAAACT +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIACARR*SNPDET
Trigger: AGTTTCATCTGGATTGCTCCACCTGCGGGCACAGGC...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGGCCTGTGCCCGCAGGTaGAGCAATCCAGATGAAACT +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWACARR*SNPDET
Trigger: AGTTTCATCTGGATTGCTCCACCTGCGGGCACAGGC...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAATCTTTGAAAATAACCTaGCCCCGGTGTGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQSLKIT*PRCVAV
Trigger: TACAGCAACACACCGGGGCCAGGTTATTTTCAAAGA...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCGGACATTCTCCCCTTTaGCGTCCTCAGGAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIGHSPL*RPQEGR
Trigger: TCTACCTTCCTGAGGACGCCAAAGGGGAGAATGTCC...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCTCCCATCCTGTAGGCTaGCTCTCAAATTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSSHPVG*LSNSSD
Trigger: GTCAGAAGAATTTGAGAGCCAGCCTACAGGATGGGA...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTTCCCATCCTGTAGGCTaGCTCTCAAATTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLSHPVG*LSNSSD
Trigger: GTCAGAAGAATTTGAGAGCCAGCCTACAGGATGGGA...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACGACCAGGAGCGCCCATaGTTGGTAGAAAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHDQERP*LVENSK
Trigger: CTTGGAATTTTCTACCAACCATGGGCGCTCCTGGTC...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTCATGTTTCCAAGGATTaGTCCTGTTTGTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSHVSKD*SCLSPA
Trigger: CGCTGGAGACAAACAGGACCAATCCTTGGAAACATG...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTCATGTTTCCAAGGATTaGTCCTGTTTGTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLHVSKD*SCLSPA
Trigger: CGCTGGAGACAAACAGGACCAATCCTTGGAAACATG...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCTTCAGAAATAAACATTaGGAATGTCTGGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSFRNKH*ECLGCH
Trigger: ATGGCATCCCAGACATTCCCAATGTTTATTTCTGAA...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCTTCAGAAATAAACATTaGGAATGTCTGGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITFRNKH*ECLGCH
Trigger: ATGGCATCCCAGACATTCCCAATGTTTATTTCTGAA...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCCAGGGCCTTACCACTaGCCAAGACACCACAACCAA +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIPGPYH*PRHHNQ
Trigger: TTGGTTGTGGTGTCTTGGCCAGTGGTAAGGCCCTGG...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACGTCGTGGCCACAGTATaGCTGAACATTTCCAAGGTA +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYVVATV*LNISKV
Trigger: TACCTTGGAAATGTTCAGCCATACTGTGGCCACGAC...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGTGGGGTGTATTTCTaGCCACATCCCATCACCAAA +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSCGVYF*PHPITK
Trigger: TTTGGTGATGGGATGTGGCCAGAAATACACCCCACA...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACCTGGTTGTCCATGTGTaGGGTGTATTTCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHLVVHV*GVFLAT
Trigger: TGTGGCCAGAAATACACCCCACACATGGACAACCAG...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATACTCCAGCTTCACCTaGTTGTCCATGTGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEYSSFT*LSMCGV
Trigger: CACCCCACACATGGACAACCAGGTGAAGCTGGAGTA...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTTACTCCAGCTTCACCTaGTTGTCCATGTGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIYSSFT*LSMCGV
Trigger: CACCCCACACATGGACAACCAGGTGAAGCTGGAGTA...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTGCCAGGTAAGGCCGTaGTTGGTTGAGTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPCQVRP*LVEYSS
Trigger: GCTGGAGTACTCAACCAACCACGGCCTTACCTGGCA...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTGGAAGGCATTCTTCTTaGACGAGGTGCCAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIGRHSS*TRCQVR
Trigger: CCTTACCTGGCACCTCGTCCAAGAAGAATGCCTTCC...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTGCCCACTGCACATGTTaGGGCACTGCTGCCCAATGT +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTAHCTC*GTAAQC
Trigger: ACATTGGGCAGCAGTGCCCCAACATGTGCAGTGGGC...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGGTGCCTTGGTACCCCTaGTCACACCTGCATATGCCA +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPVPWYP*SHLHMP
Trigger: TGGCATATGCAGGTGTGACCAGGGGTACCAAGGCAC...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTGTGCCTTGGTACCCCTaGTCACACCTGCATATGCCA +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIVPWYP*SHLHMP
Trigger: TGGCATATGCAGGTGTGACCAGGGGTACCAAGGCAC...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGTGGCATTCAGTGCCTTaGTACCCCTGGTCACACCTG +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKWHSVP*YPWSHL
Trigger: CAGGTGTGACCAGGGGTACCAAGGCACTGAATGCCA...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTAGGGCAGCTTCTGGGTaGCATTCAGTGCCTTGGTAC +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPRAASG*HSVPWY
Trigger: GTACCAAGGCACTGAATGCCACCCAGAAGCTGCCCT...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACGGTCTTGGCAGCAGCTaGAAGCTCCAGATAGACAAA +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHGLGSS*KLQIDK
Trigger: TTTGTCTATCTGGAGCTTCCAGCTGCTGCCAAGACC...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAACCCCTGTGTGATACATaGTGGGCTCACTTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKPLCDT*WAHLVL
Trigger: GAGAACTAAGTGAGCCCACCATGTATCACACAGGGG...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTGGCCACTGCAGTAACTaGGACAAGGCTCGGATATGT +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIGHCSN*DKARIC
Trigger: ACATATCCGAGCCTTGTCCCAGTTACTGCAGTGGCC...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATCAGCCAGTTCCAACCTaGGCACCTGTTATCTTGTAC +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNQPVPT*APVILY
Trigger: GTACAAGATAACAGGTGCCCAGGTTGGAACTGGCTG...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAGCACGGGTTGACTCCTaGGGTCAGGAACGCCTTTAC +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTARVDS*GQERLY
Trigger: GTAAAGGCGTTCCTGACCCCAGGAGTCAACCCGTGC...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTCACACACGGGCATCTTaGTGCCTCCTGGGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIHTRAS*CLLGEA
Trigger: TGCTTCACCCAGGAGGCACCAAGATGCCCGTGTGTG...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTGAGTGGCTTGGGACCTaGTATAAGGAGGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIEWLGT*YKEGEA
Trigger: TGCCTCTCCCTCCTTATACCAGGTCCCAAGCCACTC...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGGAGTGGCTTGGGACCTaGTATAAGGAGGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWEWLGT*YKEGEA
Trigger: TGCCTCTCCCTCCTTATACCAGGTCCCAAGCCACTC...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGGAGTGGCTTGGGACCTaGTATAAGGAGGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPEWLGT*YKEGEA
Trigger: TGCCTCTCCCTCCTTATACCAGGTCCCAAGCCACTC...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAGCCAACGGAAACGAGTaGCTTGGGACCTGGTATAAG +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEANGNE*LGTWYK
Trigger: CTTATACCAGGTCCCAAGCCACTCGTTTCCGTTGGC...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACCTTGTCAAAAGGAGCTaGTTGATGCCAACGGAAACG +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYLVKRS*LMPTET
Trigger: CGTTTCCGTTGGCATCAACCAGCTCCTTTTGACAAG...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTACTTGTCAAAAGGAGCTaGTTGATGCCAACGGAAACG +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVLVKRS*LMPTET
Trigger: CGTTTCCGTTGGCATCAACCAGCTCCTTTTGACAAG...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTACAGACGCAGTTTCCCTaGATGCATCTCCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLQTQFP*MHLPWP
Trigger: TGGCCATGGGAGATGCATCCAGGGAAACTGCGTCTG...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTCCAGTTCTGACTGGATaGAGCTCGATTGAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLPVLTG*SSIEVV
Trigger: GACAACTTCAATCGAGCTCCATCCAGTCAGAACTGG...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATAACGGTCCTTTaGTCAGCAGAGCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNSITVL*SAEPEM
Trigger: CATCTCAGGCTCTGCTGACCAAAGGACCGTTATGCT...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAAGCATAACGGTCCTTTaGTCAGCAGAGCCTGAGATG +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRSITVL*SAEPEM
Trigger: CATCTCAGGCTCTGCTGACCAAAGGACCGTTATGCT...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAACTTAAGCAATCTCCATaGCCCCTGCAGTTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKLKQSP*PLQLSK
Trigger: CTTGGACAACTGCAGGGGCCATGGAGATTGCTTAAG...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTCGGCAGATGGGACGATaGCAAGAGGTCATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIRQMGR*QEVMLF
Trigger: GAACAACATGACCTCTTGCCATCGTCCCATCTGCCG...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCGAGCAGTCATCACCTTaGAAGCTCTCGTCGCAGATG +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIEQSSP*KLSSQM
Trigger: CATCTGCGACGAGAGCTTCCAAGGTGATGACTGCTC...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAGTGAAGTCCTTTGGCTaGTGCTGGGCGATGACATGC +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLVKSFG*CWAMTC
Trigger: GCATGTCATCGCCCAGCACCAGCCAAAGGACTTCAC...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAACTAATTTTCTCTAGCTaGATCCAGTCCGCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQLIFSS*IQSAEL
Trigger: TAACTCTGCGGACTGGATTCAGCTAGAGAAAATTAG...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTAATGGAGTTCCCATCTaGCTGACAGCTATGCTTAAC +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSNGVPI*LTAMLN
Trigger: GTTAAGCATAGCTGTCAGTCAGATGGGAACTCCATT...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCAATGGAGTTCCCATCTaGCTGACAGCTATGCTTAAC +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSNGVPI*LTAMLN
Trigger: GTTAAGCATAGCTGTCAGTCAGATGGGAACTCCATT...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAATTGGTAGCAGGAGTCTaGAGTTCAGGATTGATGACC +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKLVAGV*SSGLMT
Trigger: GGTCATCAATCCTGAACTTCAGACTCCTGCTACCAA...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGACACTGTTACCAGGCTaGTGCGTTCCACATCCCAGA +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPTLLPG*CVPHPR
Trigger: TCTGGGATGTGGAACGCATCAGCCTGGTAACAGTGT...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCGAGAAACCTGGATTGTaGGCTGTCAAGGAAAGATGT +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSEKPGL*AVKERC
Trigger: ACATCTTTCCTTGACAGCTCACAATCCAGGTTTCTC...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACATCCCCAGTCTCAGTGTaGACTGGAGAAACCTGGATT +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTSPVSV*TGETWI
Trigger: AATCCAGGTTTCTCCAGTTCACACTGAGACTGGGGA...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTCTCTCTGGGAAGAATaGTACGGTTGCCACCATCTG +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFISLWEE*YGCHHL
Trigger: CAGATGGTGGCAACCGTATCATTCTTCCCAGAGAGA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATCTCTCTGGGAAGAATaGTACGGTTGCCACCATCTG +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYESLWEE*YGCHHL
Trigger: CAGATGGTGGCAACCGTATCATTCTTCCCAGAGAGA...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACTGCTCCTATCTGCATTaGTTGTGTTTCCACATAGCG +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYCSYLH*LCFHIA
Trigger: CGCTATGTGGAAACACAATCAATGCAGATAGGAGCA...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATATGATCCAGAAGAGATaGCACCACACCCTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNMIQKR*HHTLVL
Trigger: CAGAACAAGGGTGTGGTGTCATCTCTTCTGGATCAT...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAGTCAGGCTTGTTGCATaGAGCACTCTCTCCGCCTAT +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSVRLVA*STLSAY
Trigger: ATAGGCGGAGAGAGTGCTTCATGCAACAAGCCTGAC...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCAGTACTGCTGAATTaGTTGGCACAACCTATGTTT +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRAVLLN*LAQPMF
Trigger: AAACATAGGTTGTGCCAATCAATTCAGCAGTACTGC...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATCTGGAGCAGTACTGCTaGATTGATTGGCACAACCTA +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNLEQYC*IDWHNL
Trigger: TAGGTTGTGCCAATCAATTCAGCAGTACTGCTCCAG...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAAGGCACGTTTTTCTGTaGGCTGCTCTCCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGRHVFL*AALLDP
Trigger: TGGATCCAGGAGAGCAGCTCACAGAAAAACGTGCCT...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATACAGAAACACACTCCTaGAATGCAGTCCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYTETHS*NAVPMA
Trigger: GGCCATGGGGACTGCATTTCAGGAGTGTGTTTCTGT...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTGTGATTGGGGACATTTaGCACACAGGTTCCTTGTGC +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIVIGDI*HTGSLC
Trigger: GCACAAGGAACCTGTGTGTCAAATGTCCCCAATCAC...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAATCGAACATCTCATTGTaGTTGGGGACATTTGACACA +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQSNISL*LGTFDT
Trigger: TGTGTCAAATGTCCCCAATCACAATGAGATGTTCGA...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGTGTACCACAGAGGGCTaGGCTTCCCCTCAAACCTAT +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKCTTEG*ASPQTY
Trigger: ATAGGTTTGAGGGGAAGCTCAGCCCTCTGTGGTACA...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAAAAATTGAACAAGTCTaGTATTCCTGGTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPKIEQV*YSWCPE
Trigger: CTCTGGACACCAGGAATATCAGACTTGTTCAATTTT...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGATGCAGGTAATGCCTaGAGTTTTGCTTCCAATTTG +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRDAGNA*SFASNL
Trigger: CAAATTGGAAGCAAAACTTCAGGCATTACCTGCATC...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAGATGCAGGTAATGCCTaGAGTTTTGCTTCCAATTTG +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQDAGNA*SFASNL
Trigger: CAAATTGGAAGCAAAACTTCAGGCATTACCTGCATC...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGCAAAAAGGTAGATGCTaGCACATGAAAATCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRQKGRC*HMKIPG
Trigger: ACCTGGGATTTTCATGTGTCAGCATCTACCTTTTTG...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACACAAAAAGGTAGATGCTaGCACATGAAAATCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTQKGRC*HMKIPG
Trigger: ACCTGGGATTTTCATGTGTCAGCATCTACCTTTTTG...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATCATCCAAGGGCACCCTaGGGCCAGTACAACATTATC +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYHPRAP*GQYNII
Trigger: GATAATGTTGTACTGGCCTCAGGGTGCCCTTGGATG...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGCATCCAAGGGCACCCTaGGGCCAGTACAACATTATC +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKHPRAP*GQYNII
Trigger: GATAATGTTGTACTGGCCTCAGGGTGCCCTTGGATG...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGACATCCAAGGGCACCCTaGGGCCAGTACAACATTATC +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGHPRAP*GQYNII
Trigger: GATAATGTTGTACTGGCCTCAGGGTGCCCTTGGATG...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAACAAACACCATAGCTaGATCTTCTTCAGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNNKHHS*IFFRCP
Trigger: GGGGCACCTGAAGAAGATTCAGCTATGGTGTTTGTT...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTTGGAGCATAAAGAGCTaGCGTGGCTGCTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIWSIKS*RGCCCG
Trigger: ACCACAGCAGCAGCCACGTCAGCTCTTTATGCTCCA...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTTGGAGCATAAAGAGCTaGCGTGGCTGCTGCTGTGGT +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTWSIKS*RGCCCG
Trigger: ACCACAGCAGCAGCCACGTCAGCTCTTTATGCTCCA...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGATCCCTGGTACCATCTaGAACGGACAGATCCACAAA +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQIPGTI*NGQIHK
Trigger: TTTGTGGATCTGTCCGTTTCAGATGGTACCAGGGAT...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCTACATTTGGTTCCATTaGTACAGCTCCCCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSYIWFH*YSSPVH
Trigger: ATGGACAGGGGAGCTGTATCAATGGAACCAAATGTA...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTTACAGGTTGGACCTaGGTAGCCAGGGTCACATAT +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNFTGWT*VARVTY
Trigger: ATATGTGACCCTGGCTACTCAGGTCCAACCTGTAAA...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGACGAGAGGCCACCGTTaGGAGAATACTGTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPTRGHR*ENTVGA
Trigger: TGCTCCTACAGTATTCTCTCAACGGTGGCCTCTCGT...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTCTGAAAAGGAACTCCTaGAGAAGACTCCACGAGAGG +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTILKRNS*RRLHER
Trigger: CCTCTCGTGGAGTCTTCTTCAGGAGTTCCTTTTCAG...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACACATTGCTGGAATTGCTaGAAAGGAACTCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTHCWNC*KGTPEE
Trigger: TTCTTCAGGAGTTCCTTTTCAGCAATTCCAGCAATG...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTCATTGCTGGAATTGCTaGAAAGGAACTCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIHCWNC*KGTPEE
Trigger: TTCTTCAGGAGTTCCTTTTCAGCAATTCCAGCAATG...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGTTGGTGCCTCCTGGGTaGAGCAGCCATTTCCTACTA +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKLVPPG*SSHFLL
Trigger: TAGTAGGAAATGGCTGCTTCACCCAGGAGGCACCAA...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTCAAAAGGAGCTGGTTaGTGCCAACGGAAACGAGTG +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFISKGAG*CQRKRV
Trigger: CACTCGTTTCCGTTGGCATCAACCAGCTCCTTTTGA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTTCAAAAGGAGCTGGTTaGTGCCAACGGAAACGAGTG +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTISKGAG*CQRKRV
Trigger: CACTCGTTTCCGTTGGCATCAACCAGCTCCTTTTGA...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTGACTACAACCCCCACTaGAATGGAGAGCCATTCCCG +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTDYNPH*NGEPFP
Trigger: CGGGAATGGCTCTCCATTTCAGTGGGGGTTGTAGTC...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTCAGCAGAGCCTGAGATaGGGACATTGTCAATGGCCC +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAQQSLR*GHCQWP
Trigger: GGGCCATTGACAATGTCCTCATCTCAGGCTCTGCTG...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTGGTCAGCAGAGCCTaGGATGAGGACATTGTCAAT +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNLVSRA*DEDIVN
Trigger: ATTGACAATGTCCTCATCTCAGGCTCTGCTGACCAA...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTACCTCCCGTCCATCATaGCTGCCACAGAGCATCACA +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCATSRPS*LPQSIT
Trigger: TGTGATGCTCTGTGGCAGTCATGATGGACGGGAGGT...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAACCTCCCGTCCATCATaGCTGCCACAGAGCATCACA +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTTSRPS*LPQSIT
Trigger: TGTGATGCTCTGTGGCAGTCATGATGGACGGGAGGT...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGATGCCCACTGCATGTCTaGGTACTTCTGATAGAACCT +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRCPLHV*VLLIEP
Trigger: AGGTTCTATCAGAAGTACTCAGACATGCAGTGGGCA...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAGTAGCAGTTTGGCCCTaGGTATCCCGGATCACAGAT +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKVAVWP*VSRITD
Trigger: ATCTGTGATCCGGGATACTCAGGGCCAAACTGCTAC...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACCACAATTCCATTGCTaGTCACAAAAGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTPQFHC*SQKAAT
Trigger: GGTGGCAGCCTTTTGTGATCAGCAATGGAATTGTGG...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCCACAATTCCATTGCTaGTCACAAAAGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIPQFHC*SQKAAT
Trigger: GGTGGCAGCCTTTTGTGATCAGCAATGGAATTGTGG...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTTGGGAAGGTCGTGACTaGAAACAGAGCAGTCATCAC +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIWEGRD*KQSSHH
Trigger: GTGATGACTGCTCTGTTTTCAGTCACGACCTTCCCA...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGCCCAGTTTGCCTCGGTaGCTCTTGCGGACTCAAAAT +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKPSLPR*LLRTQN
Trigger: ATTTTGAGTCCGCAAGAGTCACCGAGGCAAACTGGG...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAACCTATGACTCCACCTTaGATGGTCTCCCAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKPMTPP*MVSQFA
Trigger: GGCAAACTGGGAGACCATTCAAGGTGGAGTCATAGG...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCCTATGACTCCACCTTaGATGGTCTCCCAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPPMTPP*MVSQFA
Trigger: GGCAAACTGGGAGACCATTCAAGGTGGAGTCATAGG...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGGCCATTAAAGTACAGTaGGTCTCCATGGGCGTAGGG +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPAIKVQ*VSMGVG
Trigger: CCCTACGCCCATGGAGACTCACTGTACTTTAATGGC...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAACTCTCTGAGCTTGTGTaGAGTCCTTTGGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKLSELV*SPLAGA
Trigger: AGCACCAGCCAAAGGACTTCACACAAGCTCAGAGAG...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTTGTTGTAGAAATGTCTaGGCCCATGTTGTCGTGAAA +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAICCRNV*AHVVVK
Trigger: TTTCACGACAACATGGGCTCAGACATTTCTACAACA...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACATGTTGTAGAAATGTCTaGGCCCATGTTGTCGTGAAA +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTCCRNV*AHVVVK
Trigger: TTTCACGACAACATGGGCTCAGACATTTCTACAACA...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACGTGTACACTCGGTCTTaGGAAGGGCTTTCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNVYTRS*EGLSGN
Trigger: ATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACAC...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGACTGGCCCCGGTGTGTTaGTGTAGCCATGAAATTCAC +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGLAPVC*CSHEIH
Trigger: GTGAATTTCATGGCTACAGCAACACACCGGGGCCAG...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTCCTTGTTCACACAACTaGTGGGCTAAAGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLPCSHN*WAKASL
Trigger: CAAAGATGCTTTAGCCCAGCAGTTGTGTGAACAAGG...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTCCTTGTTCACACAACTaGTGGGCTAAAGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSPCSHN*WAKASL
Trigger: CAAAGATGCTTTAGCCCAGCAGTTGTGTGAACAAGG...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGGGAAGAAAAGCCAGTTaGCTGTGTCCACTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPGRKAS*LCPLGR
Trigger: TCGACCCAGTGGACACAGGCAACTGGCTTTTCTTCC...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTGGAAGAAAAGCCAGTTaGCTGTGTCCACTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIGRKAS*LCPLGR
Trigger: TCGACCCAGTGGACACAGGCAACTGGCTTTTCTTCC...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACACAGGGGCTCTGCACGTaGTCAGAACAGATTTGCTCC +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTQGLCT*SEQICS
Trigger: GGAGCAAATCTGTTCTGAGCACGTGCAGAGCCCCTG...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGGCTGATCAGGGGCTCTaGACGTGCTCAGAACAGATT +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPADQGL*TCSEQI
Trigger: AATCTGTTCTGAGCACGTGCAGAGCCCCTGATCAGC...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTGCTGATCAGGGGCTCTaGACGTGCTCAGAACAGATT +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPADQGL*TCSEQI
Trigger: AATCTGTTCTGAGCACGTGCAGAGCCCCTGATCAGC...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAGCTGCCCAATGTAAATaGTGTCCAAAGCCCACTCGT +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTAAQCK*CPKPTR
Trigger: ACGAGTGGGCTTTGGACAGCATTTACATTGGGCAGC...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAATGAGCCATGCCCACTaGACATGTTGGGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTMSHAH*TCWGTA
Trigger: AGCAGTGCCCCAACATGTGCAGTGGGCATGGCTCAT...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCGGTCACACCTGCATATaGCATGATCGCATGAGCCAT +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIGHTCI*HDRMSH
Trigger: ATGGCTCATGCGATCATGGCATATGCAGGTGTGACC...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAACCCCTGGTCACACCTaGATATGCCATGATCGCATG +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGTPGHT*ICHDRM
Trigger: CATGCGATCATGGCATATGCAGGTGTGACCAGGGGT...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTACCCCCAATAACTTCTTaGCAGTCAGACTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLPPITS*QSDSQP
Trigger: TGGCTGGGAGTCTGACTGGCAAGAAGTTATTGGGGG...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGACCCCCAATAACTTCTTaGCAGTCAGACTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGPPITS*QSDSQP
Trigger: TGGCTGGGAGTCTGACTGGCAAGAAGTTATTGGGGG...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTTGCTGTCAGGCTTGTTaGATGAAGCACTCTCTCCGC +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSICCQAC*MKHSLR
Trigger: GCGGAGAGAGTGCTTCATGCAACAAGCCTGACAGCA...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGGGATGATCTGCTTCTaGTTCTCGGACAGAATGATG +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRGMICF*FSDRMM
Trigger: CATCATTCTGTCCGAGAAGCAGAAGCAGATCATCCC...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGGGGATGATCTGCTTCTaGTTCTCGGACAGAATGATG +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQGMICF*FSDRMM
Trigger: CATCATTCTGTCCGAGAAGCAGAAGCAGATCATCCC...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTTTCGCATCCTTTGCCTaGAGAAGCCGGGTAACAGCC +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIFASFA*RSRVTA
Trigger: GGCTGTTACCCGGCTTCTGCAGGCAAAGGATGCGAA...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATTCCTTCGCATCCTTTaGCTGCAGAAGCCGGGTAAC +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSFLRIL*LQKPGN
Trigger: GTTACCCGGCTTCTGCAGGCAAAGGATGCGAAGGAA...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAACGTTTTTCTGTGAGCTaGTCTCCTGGATCCATCGGA +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYERFSVS*SPGSIG
Trigger: TCCGATGGATCCAGGAGAGCAGCTCACAGAAAAACG...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAACACACTCCTGAAATaGAGTCCCCATGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLNTLLK*SPHGHC
Trigger: GCAGTGGCCATGGGGACTGCATTTCAGGAGTGTGTT...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAAACTCTCGAAGCAAATaGCAGAGTATCCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQNSRSK*QSIPLS
Trigger: TGACAATGGGATACTCTGGCATTTGCTTCGAGAGTT...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTTCCCATGTTGCGGTTaGCACCATCGAAATGCCGTT +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIFPCCG*HHRNAV
Trigger: AACGGCATTTCGATGGTGGCAACCGCAACATGGGAA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATGAATGCTTCCCATGTTaGGGTTGCCACCATCGAAAT +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNECFPC*GCHHRN
Trigger: ATTTCGATGGTGGCAACCGCAACATGGGAAGCATTC...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGATTCCCCCTCTCTaGACCATACACTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPQIPPL*TIHFRP
Trigger: TGGCCTGAAGTGTATGGTGCAGAGAGGGGGAATCTG...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAACAGATTCCCCCTCTCTaGACCATACACTTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKQIPPL*TIHFRP
Trigger: TGGCCTGAAGTGTATGGTGCAGAGAGGGGGAATCTG...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAATTCATCCATCAGGTaGCAAGTGATTCCTCCACTG +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYNSSIR*QVIPPL
Trigger: CAGTGGAGGAATCACTTGGCACCTGATGGATGAATT...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCACAGATCCACAAAGGTaGAGCTTCCCAAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFITDPQR*SFPKCT
Trigger: CGTGCACTTTGGGAAGCTGCACCTTTGTGGATCTGT...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTCCAGGGCAATGTACCTaGCCACATTGCTGGAATTGC +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPPGQCT*PHCWNC
Trigger: GCAATTCCAGCAATGTGGGCAGGTACATTGCCCTGG...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCTCCCTTACCAATGGGTaGCATGACAATCCAAGATCT +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSSLTNG*HDNPRS
Trigger: AGATCTTGGATTGTCATGGCACCCATTGGTAAGGGA...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACATTGCCCATGTCTGCTaGTTGTCAAAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHIAHVC*LSKGAG
Trigger: ACCAGCTCCTTTTGACAAGCAGCAGACATGGGCAAT...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAAATCTCCATGGCCCCTaGAGTTGTCCAAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGNLHGP*SCPSIQ
Trigger: CTGGATGCTTGGACAACTGCAGGGGCCATGGAGATT...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTAATCTCCATGGCCCCTaGAGTTGTCCAAGCATCCAG +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSINLHGP*SCPSIQ
Trigger: CTGGATGCTTGGACAACTGCAGGGGCCATGGAGATT...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTATCCCGGATCACAGATaGACTGTTCCCTTAAGCAAT +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLIPDHR*TVPLSN
Trigger: ATTGCTTAAGGGAACAGTGCATCTGTGATCCGGGAT...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTATGCGCCCCCAGTATTaGAGGAACTTTGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIMRPQY*RNFAPR
Trigger: TCGAGGTGCAAAGTTCCTGCAATACTGGGGGCGCAT...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAATGCGCCCCCAGTATTaGAGGAACTTTGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSMRPQY*RNFAPR
Trigger: TCGAGGTGCAAAGTTCCTGCAATACTGGGGGCGCAT...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATATGCGCCCCCAGTATTaGAGGAACTTTGCACCTCGA +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYMRPQY*RNFAPR
Trigger: TCGAGGTGCAAAGTTCCTGCAATACTGGGGGCGCAT...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTGTTCTCACTACCGATaGGCCCCCAGTATTGCAGGA +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPCSHYR*APSIAG
Trigger: TCCTGCAATACTGGGGGCGCATCGGTAGTGAGAACA...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTCAAAATGTTGTCCAGTaGCCACTGAGCACGCTCCAC +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPQNVVQ*PLSTLH
Trigger: GTGGAGCGTGCTCAGTGGGCACTGGACAACATTTTG...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGGGTCTGTACGAGCTaGCAGGAATCCGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWWVCTS*QESDLA
Trigger: TGCAAGATCGGATTCCTGGCAGCTCGTACAGACCCA...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAATGCCTCGGTGACTCTTaGGGACTCAAAATTATCTTT +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQCLGDS*GLKIIF
Trigger: AAAGATAATTTTGAGTCCGCAAGAGTCACCGAGGCA...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTAATGGTCTCCCAGTTTaGCTCGGTGACTCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPNGLPV*LGDSCG
Trigger: TCCGCAAGAGTCACCGAGGCAAACTGGGAGACCATT...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGTCCGTCTGCGACATaGTCCCAATTTGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSCPSAT*SQFAKQ
Trigger: TTGTTTTGCAAATTGGGAGCATGTCGCAGACGGACA...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATTGCAGCTGTCCGTCTaGGACATGCTCCCAATTTGC +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSLQLSV*DMLPIC
Trigger: GCAAATTGGGAGCATGTCGCAGACGGACAGCTGCAA...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAGACTCCTTTCATCCGTaGCTCCAGGGGGACATTGTA +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSDSFHP*LQGDIV
Trigger: TACAATGTCCCCCTGGAGGCACGGATGAAAGGAGTC...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAGTTGAAATTGTCACATaGTATTCTTGTCCCGGAACG +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQVEIVT*YSCPGT
Trigger: CGTTCCGGGACAAGAATACCATGTGACAATTTCAAC...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAACAAATCCGAAAGCACTaGAACCTCCAATGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKQIRKH*NLQCSV
Trigger: CACAGAGCATTGGAGGTTCCAGTGCTTTCGGATTTG...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGAACTGGTTACCAAACTaGTGGTCAGACATGATCCCA +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKNWLPN*WSDMIP
Trigger: TGGGATCATGTCTGACCACCAGTTTGGTAACCAGTT...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTGCCTGTGCCCGCAGGTaGAGCAATCCAGATGAAACT +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIACARR*SNPDET
Trigger: AGTTTCATCTGGATTGCTCCACCTGCGGGCACAGGC...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGTTCTCGTGGGCCATATaGTTCACAGAAGGTGACGGC +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPFSWAI*FTEGDG
Trigger: GCCGTCACCTTCTGTGAACCATATGGCCCACGAGAA...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTGGTAATCAGTTCTCGTaGGCCATATGGTTCACAGAA +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSGNQFS*AIWFTE
Trigger: TTCTGTGAACCATATGGCCCACGAGAACTGATTACC...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGGTAATCAGTTCTCGTaGGCCATATGGTTCACAGAA +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKGNQFS*AIWFTE
Trigger: TTCTGTGAACCATATGGCCCACGAGAACTGATTACC...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTGACCCAATGGAAAATTaGAGGACAGAAGCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIDPMEN*RTEAVV
Trigger: AACAACAGCTTCTGTCCTCCAATTTTCCATTGGGTC...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAATGAACCTGACCCAATaGAAAATTGGAGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTMNLTQ*KIGGQK
Trigger: CTTCTGTCCTCCAATTTTCCATTGGGTCAGGTTCAT...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAGGACATTCTCCCCTTTaGCGTCCTCAGGAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSGHSPL*RPQEGR
Trigger: TCTACCTTCCTGAGGACGCCAAAGGGGAGAATGTCC...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGACTTAACTGTAGCTCCTaGGAAGAAAAGCCAGTTGCC +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRLNCSS*EEKPVA
Trigger: GGCAACTGGCTTTTCTTCCCAGGAGCTACAGTTAAG...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGAACAGGCAAGACATaGAAAAAGTCTACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYRTGKT*KKSTAQ
Trigger: CTGGGCTGTAGACTTTTTCCATGTCTTGCCTGTTCT...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTAGAACAGGCAAGACATaGAAAAAGTCTACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLRTGKT*KKSTAQ
Trigger: CTGGGCTGTAGACTTTTTCCATGTCTTGCCTGTTCT...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAGACCAGGAGCGCCCATaGTTGGTAGAAAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEDQERP*LVENSK
Trigger: CTTGGAATTTTCTACCAACCATGGGCGCTCCTGGTC...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTGTCTCCAGCGAATCCTaGTGTTCCGGGTTAGTGCTG +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTVSSES*CSGLVL
Trigger: CAGCACTAACCCGGAACACCAGGATTCGCTGGAGAC...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGACATGTTTCCAAGGATTaGTCCTGTTTGTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRHVSKD*SCLSPA
Trigger: CGCTGGAGACAAACAGGACCAATCCTTGGAAACATG...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATTGTGGGGTGTATTTCTaGCCACATCCCATCACCAAA +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNCGVYF*PHPITK
Trigger: TTTGGTGATGGGATGTGGCCAGAAATACACCCCACA...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAATGTGGGGTGTATTTCTaGCCACATCCCATCACCAAA +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKCGVYF*PHPITK
Trigger: TTTGGTGATGGGATGTGGCCAGAAATACACCCCACA...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAACTGGTTGTCCATGTGTaGGGTGTATTTCTGGCCACA +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYELVVHV*GVFLAT
Trigger: TGTGGCCAGAAATACACCCCACACATGGACAACCAG...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGTACTCCAGCTTCACCTaGTTGTCCATGTGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPYSSFT*LSMCGV
Trigger: CACCCCACACATGGACAACCAGGTGAAGCTGGAGTA...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATGCCAGGTAAGGCCGTaGTTGGTTGAGTACTCCAGC +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTCQVRP*LVEYSS
Trigger: GCTGGAGTACTCAACCAACCACGGCCTTACCTGGCA...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAGGAAGGCATTCTTCTTaGACGAGGTGCCAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLGRHSS*TRCQVR
Trigger: CCTTACCTGGCACCTCGTCCAAGAAGAATGCCTTCC...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTGGAAGGCATTCTTCTTaGACGAGGTGCCAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIGRHSS*TRCQVR
Trigger: CCTTACCTGGCACCTCGTCCAAGAAGAATGCCTTCC...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAACAACTTGGCATACTTaGAAGGCATTCTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTTTWHT*KAFFLD
Trigger: GTCCAAGAAGAATGCCTTCCAAGTATGCCAAGTTGT...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCCTGGACCAAGTTTTCTaGGGAAGAAGCACTATGACT +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSLDQVF*GRSTMT
Trigger: AGTCATAGTGCTTCTTCCCCAGAAAACTTGGTCCAG...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAAGGGCAGCTTCTGGGTaGCATTCAGTGCCTTGGTAC +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTRAASG*HSVPWY
Trigger: GTACCAAGGCACTGAATGCCACCCAGAAGCTGCCCT...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAAGTTGGATTGATAACTaGGATGATCTGCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPSWIDN*DDLLLL
Trigger: AAGCAGAAGCAGATCATCCCAGTTATCAATCCAACT...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCTCATTGCTGATGGTGTaGCAGCACAGAAGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSSLLMV*QHRRFH
Trigger: ATGAAACCTTCTGTGCTGCCACACCATCAGCAATGA...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAGTACTGAAGAAGAACTaGAGCAGTACTGCTGAATTG +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTVLKKN*SSTAEL
Trigger: CAATTCAGCAGTACTGCTCCAGTTCTTCTTCAGTAC...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGGGAATCTGGTCTTGCTaGATGCAAGAGACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQGIWSC*MQETLE
Trigger: TTCCAAGGTCTCTTGCATCCAGCAAGACCAGATTCC...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTGGATCCATCGGAATCTaGTCTTGCTGGATGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIGSIGI*SCWMQE
Trigger: CTCTTGCATCCAGCAAGACCAGATTCCGATGGATCC...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGGCCACTGCAGTAACTaGGACAAGGCTCGGATATGT +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYGHCSN*DKARIC
Trigger: ACATATCCGAGCCTTGTCCCAGTTACTGCAGTGGCC...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACTGTCTTCGCGTCCTGTaGCAGGTCAATGGAAATGAT +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHCLRVL*QVNGND
Trigger: ATCATTTCCATTGACCTGCCACAGGACGCGAAGACA...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATTGTCTTCGCGTCCTGTaGCAGGTCAATGGAAATGAT +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNCLRVL*QVNGND
Trigger: ATCATTTCCATTGACCTGCCACAGGACGCGAAGACA...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTATGGAGCTGTACACTGTaGGAGTTGCTGAAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLWSCTL*ELLKGL
Trigger: CAAGCCCTTCAGCAACTCCCACAGTGTACAGCTCCA...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAACAGACAGCCAATGGTTaGAGGAACACACTCTTCGGT +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEQTANG*RNTLFG
Trigger: ACCGAAGAGTGTGTTCCTCCAACCATTGGCTGTCTG...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGAATGCAGACAGCCAATaGTTGGAGGAACACACTCTT +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKNADSQ*LEEHTL
Trigger: AAGAGTGTGTTCCTCCAACCATTGGCTGTCTGCATT...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAGGTTTGGGCAGTGTATaGCAAGGGAACATTGATGAA +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVGLGSV*QGNIDE
Trigger: TTCATCAATGTTCCCTTGCCATACACTGCCCAAACC...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTTGTAGACATTATCAATaGCCCATGTCACTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLCRHYQ*PMSLAE
Trigger: CTCAGCCAGTGACATGGGCCATTGATAATGTCTACA...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGTAGACATTATCAATaGCCCATGTCACTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSCRHYQ*PMSLAE
Trigger: CTCAGCCAGTGACATGGGCCATTGATAATGTCTACA...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTACATCTTGGTGCCTCCTaGGTGAAGCAGCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLHLGAS*VKQPFP
Trigger: AGGAAATGGCTGCTTCACCCAGGAGGCACCAAGATG...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACATTGGTTACGGTTGTTTaGTGTAATCAGGCACCCATA +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTLVTVV*CNQAPI
Trigger: TATGGGTGCCTGATTACACCAAACAACCGTAACCAA...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTTAAGCAATCTCCATaGCCCCTGCAGTTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTLKQSP*PLQLSK
Trigger: CTTGGACAACTGCAGGGGCCATGGAGATTGCTTAAG...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTACGGCAGATGGGACGATaGCAAGAGGTCATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLRQMGR*QEVMLF
Trigger: GAACAACATGACCTCTTGCCATCGTCCCATCTGCCG...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAGAGGTGAAAGGATaGATTGCCACAAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIIEVKG*IATKSC
Trigger: GCAGGATTTTGTGGCAATCCATCCTTTCACCTCTAT...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTGCACTAGAGGAGACATaGTCAGGCAGCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIALEET*SGSWMV
Trigger: CACCATCCAGCTGCCTGACCATGTCTCCTCTAGTGC...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGGTTTCTTCTCCCTTCTaGATCCAGCGGAACTGTGTT +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQVSSPF*IQRNCV
Trigger: AACACAGTTCCGCTGGATCCAGAAGGGAGAAGAAAC...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATATCTCCAATGTACACGTaGTCAATTGCCCAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIISPMYT*SIAQLC
Trigger: GCAAAGCTGGGCAATTGACCACGTGTACATTGGAGA...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATATGGCATATAACACGATaGTGCTGGGGTCTGAATAAC +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIWHITR*CWGLNN
Trigger: GTTATTCAGACCCCAGCATCATCGTGTTATATGCCA...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACGAGTTCCCATCTGACTaGCAGCTATGCTTAACTGTA +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHEFPSD*QLCLTV
Trigger: TACAGTTAAGCATAGCTGTCAGTCAGATGGGAACTC...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAGCTCTCAAATTCTTCTaGCCATTGCTCTTGAATATC +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQALKFF*PLLLNI
Trigger: GATATTCAAGAGCAATGGTCAGAAGAATTTGAGAGC...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCACATTCTGTACCAATaGCAGCTCCCAAGACATCCC +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIHILYQ*QLPRHP
Trigger: GGGATGTCTTGGGAGCTGTCATTGGTACAGAATGTG...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCAGACGGAACCTTATATaGGGAATAGGAAAGGGTATC +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSRRNLI*GIGKGI
Trigger: GATACCCTTTCCTATTCCTCATATAAGGTTCCGTCT...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGTTCCTATTATGTCCTTaGTGGTTCTTTTGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRFLLCP*WFFCLR
Trigger: TCTCAGGCAAAAGAACCATCAAGGACATAATAGGAA...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATTCCCCAGTCTCAGTGTaGACTGGAGAAACCTGGATT +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYSPVSV*TGETWI
Trigger: AATCCAGGTTTCTCCAGTTCACACTGAGACTGGGGA...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTATCCCCAGTCTCAGTGTaGACTGGAGAAACCTGGATT +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLSPVSV*TGETWI
Trigger: AATCCAGGTTTCTCCAGTTCACACTGAGACTGGGGA...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATTGCCACCATCTGAACTaGATTCCAAACTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNCHHLN*IPNCFA
Trigger: TGCAAAGCAGTTTGGAATTCAGTTCAGATGGTGGCA...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTCTCTCTGGGAAGAATaGTACGGTTGCCACCATCTG +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWSLWEE*YGCHHL
Trigger: CAGATGGTGGCAACCGTATCATTCTTCCCAGAGAGA...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAACACATAGCGCATACTTaGGGCAAGTTTAGAATCTCC +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKHIAHT*GKFRIS
Trigger: GGAGATTCTAAACTTGCCTCAAGTATGCGCTATGTG...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGACACATAGCGCATACTTaGGGCAAGTTTAGAATCTCC +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRHIAHT*GKFRIS
Trigger: GGAGATTCTAAACTTGCCTCAAGTATGCGCTATGTG...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGAACCTATGTTTAGCTTaGACTGTAGCACATATCCAG +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRNLCLA*TVAHIQ
Trigger: CTGGATATGTGCTACAGTTCAAGCTAAACATAGGTT...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTCAAAGTCCCCTGTGTaGTACATGGTGGGCTCACTT +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPSKSPV*YMVGSL
Trigger: AAGTGAGCCCACCATGTATCACACAGGGGACTTTGA...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAAGGCACGTTTTTCTGTaGGCTGCTCTCCTGGATCCA +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTRHVFL*AALLDP
Trigger: TGGATCCAGGAGAGCAGCTCACAGAAAAACGTGCCT...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTTCGAACATCTCATTGTaGTTGGGGACATTTGACACA +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLSNISL*LGTFDT
Trigger: TGTGTCAAATGTCCCCAATCACAATGAGATGTTCGA...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTAAAATTGAACAAGTCTaGTATTCCTGGTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIKIEQV*YSWCPE
Trigger: CTCTGGACACCAGGAATATCAGACTTGTTCAATTTT...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAGTTCCAGGAAGGACATaGAGTCCAACTCTCGAAGCA +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKVPGRT*SPTLEA
Trigger: TGCTTCGAGAGTTGGACTTCATGTCCTTCCTGGAAC...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGGTTCCAGGAAGGACATaGAGTCCAACTCTCGAAGCA +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKVPGRT*SPTLEA
Trigger: TGCTTCGAGAGTTGGACTTCATGTCCTTCCTGGAAC...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTGAACACACTCTTCGGTaGCAAGATGCCAGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTEHTLR*QDASPC
Trigger: GCAAGGACTGGCATCTTGTCACCGAAGAGTGTGTTC...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGTGGAAGGTAGACAGTaGTCCGCTTCCAATTCTGGA +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYVEGRQ*SASNSG
Trigger: TCCAGAATTGGAAGCGGATCACTGTCTACCTTCCAC...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCATCCCTGGTACCATCTaGAACGGACAGATCCACAAA +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIIPGTI*NGQIHK
Trigger: TTTGTGGATCTGTCCGTTTCAGATGGTACCAGGGAT...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACTACATTTGGTTCCATTaGTACAGCTCCCCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHYIWFH*YSSPVH
Trigger: ATGGACAGGGGAGCTGTATCAATGGAACCAAATGTA...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATTACATTTGGTTCCATTaGTACAGCTCCCCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNYIWFH*YSSPVH
Trigger: ATGGACAGGGGAGCTGTATCAATGGAACCAAATGTA...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCTGAAAAGGAACTCCTaGAGAAGACTCCACGAGAGG +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSILKRNS*RRLHER
Trigger: CCTCTCGTGGAGTCTTCTTCAGGAGTTCCTTTTCAG...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGCTGAAAAGGAACTCCTaGAGAAGACTCCACGAGAGG +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWLKRNS*RRLHER
Trigger: CCTCTCGTGGAGTCTTCTTCAGGAGTTCCTTTTCAG...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACTACTATCAAGGGTTGTaGAATCATCTTCCAAGACCG +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYYYQGL*NHLPRP
Trigger: CGGTCTTGGAAGATGATTTCACAACCCTTGATAGTA...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATCTTGTTGAAAGTGTCTaGCACCAGGATCCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYLVESV*HQDPLQ
Trigger: CTGCAACGGATCCTGGTGTCAGACACTTTCAACAAG...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAACCAGTGCTCATTCACTaGAGTTTTGTCTTCCATAAA +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQPVLIH*SFVFHK
Trigger: TTTATGGAAGACAAAACTTCAGTGAATGAGCACTGG...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTCCAGTGCTCATTCACTaGAGTTTTGTCTTCCATAAA +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIPVLIH*SFVFHK
Trigger: TTTATGGAAGACAAAACTTCAGTGAATGAGCACTGG...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTGTAGCAGTTTGGCCCTaGGTATCCCGGATCACAGAT +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIVAVWP*VSRITD
Trigger: ATCTGTGATCCGGGATACTCAGGGCCAAACTGCTAC...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTGTCGAGTTGTGTTGGTaGGGGCATCTTCAGGAAGAA +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPVELCW*GHLQEE
Trigger: TTCTTCCTGAAGATGCCCTCACCAACACAACTCGAC...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATCCACAATTCCATTGCTaGTCACAAAAGGCTGCCACC +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYPQFHC*SQKAAT
Trigger: GGTGGCAGCCTTTTGTGATCAGCAATGGAATTGTGG...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCCAATTGGCTGGGATTaGTTTCTGCTCCACCAATCA +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIPIGWD*FLLHQS
Trigger: TGATTGGTGGAGCAGAAATCAATCCCAGCCAATTGG...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAATCCAGCTTGAGCTGTTaGCAGAGTTGTAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKSSLSC*QSCRWW
Trigger: CCACCATCTACAACTCTGTCAACAGCTCAAGCTGGA...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTATGGGAAGGTCGTGACTaGAAACAGAGCAGTCATCAC +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLWEGRD*KQSSHH
Trigger: GTGATGACTGCTCTGTTTTCAGTCACGACCTTCCCA...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACACTCTCTGAGCTTGTGTaGAGTCCTTTGGCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTLSELV*SPLAGA
Trigger: AGCACCAGCCAAAGGACTTCACACAAGCTCAGAGAG...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTACACTGGAACCTCCAATaGTCTGTGATGCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLHWNLQ*SVMPEH
Trigger: GTGTTCAGGCATCACAGAGCATTGGAGGTTCCAGTG...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATCACTGGAACCTCCAATaGTCTGTGATGCCTGAACAC +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYHWNLQ*SVMPEH
Trigger: GTGTTCAGGCATCACAGAGCATTGGAGGTTCCAGTG...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTTCAGCTAGATGTGGGTaGACAGTGACATCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTISARCG*TVTSVG
Trigger: TCCAACAGATGTCACTGTGCACCCACATCTAGCTGA...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTGTGACGGCATTGCCATaGATAATCGCGCCACACTGT +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTVTALP*IIAPHC
Trigger: ACAGTGTGGCGCGATTATGCATGGCAATGCCGTCAC...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAGGTCACACCTGCATATaGCATGATCGCATGAGCCAT +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLGHTCI*HDRMSH
Trigger: ATGGCTCATGCGATCATGGCATATGCAGGTGTGACC...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTGGTCACACCTGCATATaGCATGATCGCATGAGCCAT +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPGHTCI*HDRMSH
Trigger: ATGGCTCATGCGATCATGGCATATGCAGGTGTGACC...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTTGCTGTCAGGCTTGTTaGATGAAGCACTCTCTCCGC +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTCCQAC*MKHSLR
Trigger: GCGGAGAGAGTGCTTCATGCAACAAGCCTGACAGCA...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGGATGATGTCATCGACTaGCCACTGGTCATAGTCCTC +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPDDVID*PLVIVL
Trigger: GAGGACTATGACCAGTGGGCAGTCGATGACATCATC...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGATAACTGGGATGATCTaGTTCTGCTTCTCGGACAGA +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQITGMI*FCFSDR
Trigger: TCTGTCCGAGAAGCAGAAGCAGATCATCCCAGTTAT...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAAACACACTCCTGAAATaGAGTCCCCATGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTNTLLK*SPHGHC
Trigger: GCAGTGGCCATGGGGACTGCATTTCAGGAGTGTGTT...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATTTCCCATGTTGCGGTTaGCACCATCGAAATGCCGTT +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYFPCCG*HHRNAV
Trigger: AACGGCATTTCGATGGTGGCAACCGCAACATGGGAA...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAGAATGCTTCCCATGTTaGGGTTGCCACCATCGAAAT +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTECFPC*GCHHRN
Trigger: ATTTCGATGGTGGCAACCGCAACATGGGAAGCATTC...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCCGATACCAGTTGGCTTaGAAATCTATAGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSRYQLA*KSIEPS
Trigger: TGATGGCTCTATAGATTTGCAAGCCAACTGGTATCG...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAGCTTGCTACAGCCCATaGTCATTTCAAACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVACYSP*SFQTAK
Trigger: TTTTGCAGTTTGAAATGAGCATGGGCTGTAGCAAGC...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACATCTTCGGTGACAAGATaGCAGTCCTTGCCATTGTTC +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTSSVTR*QSLPLF
Trigger: GAACAATGGCAAGGACTGGCATCTTGTCACCGAAGA...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTCTATTGCCCATGTCTaGTGCTTGTCAAAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNSIAHV*CLSKGA
Trigger: AGCTCCTTTTGACAAGCAGCAGACATGGGCAATAGA...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGATAGACATTATCTATTaGCCATGTCTGCTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRIDIIY*PCLLLV
Trigger: GACAAGCAGCAGACATGGGCAATAGATAATGTCTAT...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAATCTCCCATGGCCACTaGACATGTCTATGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKISHGH*TCLCSH
Trigger: ATGGCTGCATAGACATGTGCAGTGGCCATGGGAGAT...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAATCTCCCATGGCCACTaGACATGTCTATGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLISHGH*TCLCSH
Trigger: ATGGCTGCATAGACATGTGCAGTGGCCATGGGAGAT...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAATCATGGAATAGCCAGTaGTCATTCACTGAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQSWNSQ*SFTEVL
Trigger: CAAAACTTCAGTGAATGAGCACTGGCTATTCCATGA...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTACTGAGATCTTGAATTaGATAATCCAGCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAITEILN*IIQPSV
Trigger: CACTGAAGGCTGGATTATGCAATTCAAGATCTCAGT...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAGAATTCCACACTCAGTaGAAGTACTTCCACCTTCTA +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVEFHTQ*KYFHLL
Trigger: TAGAAGGTGGAAGTACTTGCACTGAGTGTGGAATTC...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGAATTCCACACTCAGTaGAAGTACTTCCACCTTCTA +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLEFHTQ*KYFHLL
Trigger: TAGAAGGTGGAAGTACTTGCACTGAGTGTGGAATTC...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTGTATTGCAGGAACTTTaGACCTCGAAGATCCAAATC +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSVLQEL*TSKIQI
Trigger: GATTTGGATCTTCGAGGTGCAAAGTTCCTGCAATAC...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCGTATTGCAGGAACTTTaGACCTCGAAGATCCAAATC +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSVLQEL*TSKIQI
Trigger: GATTTGGATCTTCGAGGTGCAAAGTTCCTGCAATAC...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTTGTTCTCACTACCGATaGGCCCCCAGTATTGCAGGA +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTCSHYR*APSIAG
Trigger: TCCTGCAATACTGGGGGCGCATCGGTAGTGAGAACA...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATCTGATCACAAAAGGCTaGCACCAGCGAAGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYLITKG*HQRSRV
Trigger: AACTCGACTTCGCTGGTGGCAGCCTTTTGTGATCAG...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCACTGATCACAAAAGGCTaGCACCAGCGAAGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSLITKG*HQRSRV
Trigger: AACTCGACTTCGCTGGTGGCAGCCTTTTGTGATCAG...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTATTGCCACAAAATCCTaGTGTCCTTACAGCATTAGG +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLIATKS*CPYSIR
Trigger: CCTAATGCTGTAAGGACAGCAGGATTTTGTGGCAAT...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGATTGCCACAAAATCCTaGTGTCCTTACAGCATTAGG +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKIATKS*CPYSIR
Trigger: CCTAATGCTGTAAGGACAGCAGGATTTTGTGGCAAT...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAACCACAATTTTAAACTaGATCATGTATCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPTTILN*IMYPGC
Trigger: ACAGCCAGGATACATGATGCAGTTTAAAATTGTGGT...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATGGGTCTGTACGAGCTaGCAGGAATCCGATCTTGCA +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTWVCTS*QESDLA
Trigger: TGCAAGATCGGATTCCTGGCAGCTCGTACAGACCCA...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACTGCCTCGGTGACTCTTaGGGACTCAAAATTATCTTT +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYCLGDS*GLKIIF
Trigger: AAAGATAATTTTGAGTCCGCAAGAGTCACCGAGGCA...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGCCTCGGTGACTCTTaGGGACTCAAAATTATCTTT +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVCLGDS*GLKIIF
Trigger: AAAGATAATTTTGAGTCCGCAAGAGTCACCGAGGCA...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAAATGGTCTCCCAGTTTaGCTCGGTGACTCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTNGLPV*LGDSCG
Trigger: TCCGCAAGAGTCACCGAGGCAAACTGGGAGACCATT...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATTGTCCGTCTGCGACATaGTCCCAATTTGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNCPSAT*SQFAKQ
Trigger: TTGTTTTGCAAATTGGGAGCATGTCGCAGACGGACA...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTGACTCCTTTCATCCGTaGCTCCAGGGGGACATTGTA +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTDSFHP*LQGDIV
Trigger: TACAATGTCCCCCTGGAGGCACGGATGAAAGGAGTC...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACAACTGGTTACCAAACTaGTGGTCAGACATGATCCCA +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNNWLPN*WSDMIP
Trigger: TGGGATCATGTCTGACCACCAGTTTGGTAACCAGTT...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGTGTTCACACAACTGCTaGGCTAAAGCATCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRCSHNC*AKASLK
Trigger: TTTCAAAGATGCTTTAGCCCAGCAGTTGTGTGAACA...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTTGTTCACACAACTGCTaGGCTAAAGCATCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAICSHNC*AKASLK
Trigger: TTTCAAAGATGCTTTAGCCCAGCAGTTGTGTGAACA...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATCACAGTGACATCTGTTaGAGCTCCTTGTTCACACAA +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNHSDIC*SSLFTQ
Trigger: TTGTGTGAACAAGGAGCTCCAACAGATGTCACTGTG...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTTTCTCGTGGGCCATATaGTTCACAGAAGGTGACGGC +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTFSWAI*FTEGDG
Trigger: GCCGTCACCTTCTGTGAACCATATGGCCCACGAGAA...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAATGAACCTGACCCAATaGAAAATTGGAGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVMNLTQ*KIGGQK
Trigger: CTTCTGTCCTCCAATTTTCCATTGGGTCAGGTTCAT...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTGGACATTCTCCCCTTTaGCGTCCTCAGGAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIGHSPL*RPQEGR
Trigger: TCTACCTTCCTGAGGACGCCAAAGGGGAGAATGTCC...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCTTAACTGTAGCTCCTaGGAAGAAAAGCCAGTTGCC +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFILNCSS*EEKPVA
Trigger: GGCAACTGGCTTTTCTTCCCAGGAGCTACAGTTAAG...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGGACCAGGAGCGCCCATaGTTGGTAGAAAATTCCAAG +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPDQERP*LVENSK
Trigger: CTTGGAATTTTCTACCAACCATGGGCGCTCCTGGTC...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACAACATTGGGAATGTCTaGGATGCCATCTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNNIGNV*DAISQA
Trigger: AGCTTGTGAGATGGCATCCCAGACATTCCCAATGTT...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAGGTAAGAGGAGAGCCTaGAACTGCCAAAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSGKRRA*NCQSFQ
Trigger: CTGAAAGCTTTGGCAGTTCCAGGCTCTCCTCTTACC...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAGGTAAGAGGAGAGCCTaGAACTGCCAAAGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLGKRRA*NCQSFQ
Trigger: CTGAAAGCTTTGGCAGTTCCAGGCTCTCCTCTTACC...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGTCTCAGTGTGAACTaGAGAAACCTGGATTGTGAG +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNSLSVN*RNLDCE
Trigger: CTCACAATCCAGGTTTCTCCAGTTCACACTGAGACT...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGTCTCAGTGTGAACTaGAGAAACCTGGATTGTGAG +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQSLSVN*RNLDCE
Trigger: CTCACAATCCAGGTTTCTCCAGTTCACACTGAGACT...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGACAACTTGGCATACTTaGAAGGCATTCTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKTTWHT*KAFFLD
Trigger: GTCCAAGAAGAATGCCTTCCAAGTATGCCAAGTTGT...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTACAACTTGGCATACTTaGAAGGCATTCTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSTTWHT*KAFFLD
Trigger: GTCCAAGAAGAATGCCTTCCAAGTATGCCAAGTTGT...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGCTGGACCAAGTTTTCTaGGGAAGAAGCACTATGACT +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQLDQVF*GRSTMT
Trigger: AGTCATAGTGCTTCTTCCCCAGAAAACTTGGTCCAG...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGGTCTTGGCAGCAGCTaGAAGCTCCAGATAGACAAA +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYGLGSS*KLQIDK
Trigger: TTTGTCTATCTGGAGCTTCCAGCTGCTGCCAAGACC...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATTCATTGCTGATGGTGTaGCAGCACAGAAGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNSLLMV*QHRRFH
Trigger: ATGAAACCTTCTGTGCTGCCACACCATCAGCAATGA...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTCATTGCTGATGGTGTaGCAGCACAGAAGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNSLLMV*QHRRFH
Trigger: ATGAAACCTTCTGTGCTGCCACACCATCAGCAATGA...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAGCTCACTTAGTTCTCTaGAGTTTCCTTCGCATCCTT +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKAHLVL*SFLRIL
Trigger: AAGGATGCGAAGGAAACTCCAGAGAACTAAGTGAGC...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAGCTCACTTAGTTCTCTaGAGTTTCCTTCGCATCCTT +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIAHLVL*SFLRIL
Trigger: AAGGATGCGAAGGAAACTCCAGAGAACTAAGTGAGC...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGCCCCTGTGTGATACATaGTGGGCTCACTTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKPLCDT*WAHLVL
Trigger: GAGAACTAAGTGAGCCCACCATGTATCACACAGGGG...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAGGATGCAAGAGACCTTaGAATAACAATGGTGATTCT +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTGCKRP*NNNGDS
Trigger: AGAATCACCATTGTTATTCCAAGGTCTCTTGCATCC...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCACAGCCAGTTCCAACCTaGGCACCTGTTATCTTGTAC +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSQPVPT*APVILY
Trigger: GTACAAGATAACAGGTGCCCAGGTTGGAACTGGCTG...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACATGTCTTCGCGTCCTGTaGCAGGTCAATGGAAATGAT +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTCLRVL*QVNGND
Trigger: ATCATTTCCATTGACCTGCCACAGGACGCGAAGACA...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATCAGACAGCCAATGGTTaGAGGAACACACTCTTCGGT +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYQTANG*RNTLFG
Trigger: ACCGAAGAGTGTGTTCCTCCAACCATTGGCTGTCTG...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGACAGCCAATGGTTaGAGGAACACACTCTTCGGT +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIQTANG*RNTLFG
Trigger: ACCGAAGAGTGTGTTCCTCCAACCATTGGCTGTCTG...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAATGCAGACAGCCAATaGTTGGAGGAACACACTCTT +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQNADSQ*LEEHTL
Trigger: AAGAGTGTGTTCCTCCAACCATTGGCTGTCTGCATT...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAACTTGTAGCATTGGTTTaGGCAGTGTATGGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYELVALV*AVYGKG
Trigger: TCCCTTGCCATACACTGCCCAAACCAATGCTACAAG...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTTGTAGCATTGGTTTaGGCAGTGTATGGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTLVALV*AVYGKG
Trigger: TCCCTTGCCATACACTGCCCAAACCAATGCTACAAG...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTGCCAACGGAAACGAGTaGCTTGGGACCTGGTATAAG +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTANGNE*LGTWYK
Trigger: CTTATACCAGGTCCCAAGCCACTCGTTTCCGTTGGC...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGTGGATGCATCTCCCATaGCCACTGCACATGTCTATG +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKWMHLP*PLHMSM
Trigger: CATAGACATGTGCAGTGGCCATGGGAGATGCATCCA...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAAAGTTGTCTTTGAGTTaGGTTGGAAGAGAGGTCTCG +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIKLSLS*VGREVS
Trigger: CGAGACCTCTCTTCCAACCCAACTCAAAGACAACTT...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGTCCAAGAGAACACCTTaGTTACGGTTGTTTGGTGTA +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKSKRTP*LRLFGV
Trigger: TACACCAAACAACCGTAACCAAGGTGTTCTCTTGGA...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTTCCAAGAGAACACCTTaGTTACGGTTGTTTGGTGTA +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLSKRTP*LRLFGV
Trigger: TACACCAAACAACCGTAACCAAGGTGTTCTCTTGGA...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCAAAGTGTCCACCAATTaGCTGGGATTGATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSKVSTN*LGLISA
Trigger: AGCAGAAATCAATCCCAGCCAATTGGTGGACACTTT...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAAAGTGTCCACCAATTaGCTGGGATTGATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYKVSTN*LGLISA
Trigger: AGCAGAAATCAATCCCAGCCAATTGGTGGACACTTT...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTGGTCACCACAAGAAGTaGCTTCACAACCCACCACAA +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPGHHKK*LHNPPQ
Trigger: TTGTGGTGGGTTGTGAAGCCACTTCTTGTGGTGACC...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAGTTTCTTCTCCCTTCTaGATCCAGCGGAACTGTGTT +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEVSSPF*IQRNCV
Trigger: AACACAGTTCCGCTGGATCCAGAAGGGAGAAGAAAC...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCGTTTCTTCTCCCTTCTaGATCCAGCGGAACTGTGTT +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIVSSPF*IQRNCV
Trigger: AACACAGTTCCGCTGGATCCAGAAGGGAGAAGAAAC...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTCTCCAATGTACACGTaGTCAATTGCCCAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFISPMYT*SIAQLC
Trigger: GCAAAGCTGGGCAATTGACCACGTGTACATTGGAGA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTATGGGAACTTATTTGTaGGAGATAGGGTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSMGTYL*EIGSSS
Trigger: GGATGAAGACCCTATCTCCCACAAATAAGTTCCCAT...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATTGGGCTTTTATAGCTTaGTTCACCCTAGAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNWAFIA*FTLECN
Trigger: GTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCA...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGATGGGCTTTTATAGCTTaGTTCACCCTAGAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRWAFIA*FTLECN
Trigger: GTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCA...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR CAA 72 bp ATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTaGTACAACTTCATCAGAAGGTATGAATATGACCCG +
Preference number: 4 (lower is better)
Translates to: IQSYRAIIMLLV*YNFIRRYEYDP
Trigger: CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACCTAATTTTCTCTAGCTaGATCCAGTCCGCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNLIFSS*IQSAEL
Trigger: TAACTCTGCGGACTGGATTCAGCTAGAGAAAATTAG...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAAATGGAGTTCCCATCTaGCTGACAGCTATGCTTAAC +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTNGVPI*LTAMLN
Trigger: GTTAAGCATAGCTGTCAGTCAGATGGGAACTCCATT...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATGGTGGTGGCAAAATTaGACTCGCTGCCTTCATTTC +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSWWWQN*TRCLHF
Trigger: GAAATGAAGGCAGCGAGTTCAATTTTGCCACCACCA...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTTCCTCTCTCCATCTTTaGGGAAGACCATTGATAAGC +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTISSLHL*GRPLIS
Trigger: GCTTATCAATGGTCTTCCTCAAAGATGGAGAGAGGA...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAAGACGGAACCTTATATaGGGAATAGGAAAGGGTATC +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRRRNLI*GIGKGI
Trigger: GATACCCTTTCCTATTCCTCATATAAGGTTCCGTCT...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCTTCCACATCCCAGATTaGTGGAAAACTGTATCATGT +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSFHIPD*WKTVSC
Trigger: ACATGATACAGTTTTCCATCAATCTGGGATGTGGAA...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAGAGAAACCTGGATTGTaGGCTGTCAAGGAAAGATGT +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEEKPGL*AVKERC
Trigger: ACATCTTTCCTTGACAGCTCACAATCCAGGTTTCTC...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATGATAGCTGAGATATaGATAATGCTCCAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIMIAEI*IMLQEF
Trigger: AAACTCCTGGAGCATTATTCATATCTCAGCTATCAT...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTACGGTTGCCACCATCTaGACTGAATTCCAAACTGCT +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPTVATI*TEFQTA
Trigger: AGCAGTTTGGAATTCAGTTCAGATGGTGGCAACCGT...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTTCTCTCTGGGAAGAATaGTACGGTTGCCACCATCTG +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCASLWEE*YGCHHL
Trigger: CAGATGGTGGCAACCGTATCATTCTTCCCAGAGAGA...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATACTGGTTCTCAAAATCTaGCATAATTGTGGACGGAAG +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIILVLKI*HNCGRK
Trigger: CTTCCGTCCACAATTATGTCAGATTTTGAGAACCAG...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACCTGGTTCTCAAAATCTaGCATAATTGTGGACGGAAG +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHLVLKI*HNCGRK
Trigger: CTTCCGTCCACAATTATGTCAGATTTTGAGAACCAG...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTATGATCCAGAAGAGATaGCACCACACCCTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIMIQKR*HHTLVL
Trigger: CAGAACAAGGGTGTGGTGTCATCTCTTCTGGATCAT...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATTTTCCCAGCCTTGCTaGAGTACAGAGATGATCCAG +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSFSQPC*STEMIQ
Trigger: CTGGATCATCTCTGTACTTCAGCAAGGCTGGGAAAA...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATCCAAATATCATTGCTaGTGGTGTGGCAGCACAGAA +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYESKYHC*WCGSTE
Trigger: TTCTGTGCTGCCACACCATCAGCAATGATATTTGGA...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGCTGGAGCAGTACTGCTaGATTGATTGGCACAACCTA +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKLEQYC*IDWHNL
Trigger: TAGGTTGTGCCAATCAATTCAGCAGTACTGCTCCAG...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATCAAAGTCCCCTGTGTaGTACATGGTGGGCTCACTT +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTSKSPV*YMVGSL
Trigger: AAGTGAGCCCACCATGTATCACACAGGGGACTTTGA...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATACAGTCAATATCAACTTaGCCTCCTTGGATTCGATAC +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIQSIST*PPWIRY
Trigger: GTATCGAATCCAAGGAGGTCAAGTTGATATTGACTG...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAGTAGATGCTGACACATaGAAATCCCAGGTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKVDADT*KSQVSA
Trigger: TGCTGAGACCTGGGATTTTCATGTGTCAGCATCTAC...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAATTCCGAGGTGTAAATTaGACTTTCCGTGTAATGCAG +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKFRGVN*TFRVMQ
Trigger: CTGCATTACACGGAAAGTTCAATTTACACCTCGGAA...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTGTGGAAGGTAGACAGTaGTCCGCTTCCAATTCTGGA +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIVEGRQ*SASNSG
Trigger: TCCAGAATTGGAAGCGGATCACTGTCTACCTTCCAC...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGAGATGTTCCAGATTTaGTGGTTTCACCATTCAGAT +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKEMFQI*WFHHSD
Trigger: ATCTGAATGGTGAAACCATCAAATCTGGAACATCTC...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATATGTAACAGAATAGAGTaGGATCTCTCTGGGGTACTT +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIICNRIE*DLSGVL
Trigger: AAGTACCCCAGAGAGATCTCACTCTATTCTGTTACA...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACTGTAACAGAATAGAGTaGGATCTCTCTGGGGTACTT +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHCNRIE*DLSGVL
Trigger: AAGTACCCCAGAGAGATCTCACTCTATTCTGTTACA...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAAACAAACACCATAGCTaGATCTTCTTCAGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKNKHHS*IFFRCP
Trigger: GGGGCACCTGAAGAAGATTCAGCTATGGTGTTTGTT...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAATCCCTGGTACCATCTaGAACGGACAGATCCACAAA +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKIPGTI*NGQIHK
Trigger: TTTGTGGATCTGTCCGTTTCAGATGGTACCAGGGAT...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGCATTGCTGGAATTGCTaGAAAGGAACTCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQHCWNC*KGTPEE
Trigger: TTCTTCAGGAGTTCCTTTTCAGCAATTCCAGCAATG...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGATACTATCAAGGGTTGTaGAATCATCTTCCAAGACCG +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRYYQGL*NHLPRP
Trigger: CGGTCTTGGAAGATGATTTCACAACCCTTGATAGTA...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTCTTGTTGAAAGTGTCTaGCACCAGGATCCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYILVESV*HQDPLQ
Trigger: CTGCAACGGATCCTGGTGTCAGACACTTTCAACAAG...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAGGTTTAGATCCACAGTaGCTAATAATCGACTACAAC +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVGLDPQ*LIIDYN
Trigger: GTTGTAGTCGATTATTAGTCACTGTGGATCTAAACC...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAAAGAATACAGATGGCTaGGAAACACTTCCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIKNTDG*ETLPEH
Trigger: ATGCTCTGGAAGTGTTTCTCAGCCATCTGTATTCTT...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAATGCCCACTGCATGTCTaGGTACTTCTGATAGAACCT +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKCPLHV*VLLIEP
Trigger: AGGTTCTATCAGAAGTACTCAGACATGCAGTGGGCA...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACGAGGAGAGAGCATTGTaGGTCTTGTCCTTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNEERAL*VLSFFL
Trigger: TAAAAAGAAGGACAAGACTCACAATGCTCTCTCCTC...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAGAGGAGAGAGCATTGTaGGTCTTGTCCTTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIEERAL*VLSFFL
Trigger: TAAAAAGAAGGACAAGACTCACAATGCTCTCTCCTC...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTATCCAGCATTACGGAATaGAGGTCACCACAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLSSITE*RSPQEV
Trigger: CACTTCTTGTGGTGACCTTCATTCCGTAATGCTGGA...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACGATTCTTTTCCAGCTTaGGCTGTTGACAGAGTTGTA +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNDSFPA*AVDRVV
Trigger: TACAACTCTGTCAACAGCTCAAGCTGGAAAAGAATC...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAGCTGCTTGCCTGATCTaGCAGCCATTAAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLAACLI*QPLKYS
Trigger: ACTGTACTTTAATGGCTGTCAGATCAGGCAAGCAGC...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGGTGTACACTCGGTCTTaGGAAGGGCTTTCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPVYTRS*EGLSGN
Trigger: ATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACAC...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTCCTTGTTCACACAACTaGTGGGCTAAAGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIPCSHN*WAKASL
Trigger: CAAAGATGCTTTAGCCCAGCAGTTGTGTGAACAAGG...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCAGCTAGATGTGGGTaGACAGTGACATCTGTTGGA +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSSARCG*TVTSVG
Trigger: TCCAACAGATGTCACTGTGCACCCACATCTAGCTGA...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTGCTGCCCAATGTAAATaGTGTCCAAAGCCCACTCGT +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAAAQCK*CPKPTR
Trigger: ACGAGTGGGCTTTGGACAGCATTTACATTGGGCAGC...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTGATGATGTCATCGACTaGCCACTGGTCATAGTCCTC +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIDDVID*PLVIVL
Trigger: GAGGACTATGACCAGTGGGCAGTCGATGACATCATC...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGGGGATGATCTGCTTCTaGTTCTCGGACAGAATGATG +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKGMICF*FSDRMM
Trigger: CATCATTCTGTCCGAGAAGCAGAAGCAGATCATCCC...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCATAACTGGGATGATCTaGTTCTGCTTCTCGGACAGA +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIITGMI*FCFSDR
Trigger: TCTGTCCGAGAAGCAGAAGCAGATCATCCCAGTTAT...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTCTGGTCTTGCTGGATaGAAGAGACCTTGGAATAAC +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFISGLAG*KRPWNN
Trigger: GTTATTCCAAGGTCTCTTGCATCCAGCAAGACCAGA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAAACTCTCGAAGCAAATaGCAGAGTATCCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRNSRSK*QSIPLS
Trigger: TGACAATGGGATACTCTGGCATTTGCTTCGAGAGTT...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGGAATGCTTCCCATGTTaGGGTTGCCACCATCGAAAT +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPECFPC*GCHHRN
Trigger: ATTTCGATGGTGGCAACCGCAACATGGGAAGCATTC...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGGAATGCTTCCCATGTTaGGGTTGCCACCATCGAAAT +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKECFPC*GCHHRN
Trigger: ATTTCGATGGTGGCAACCGCAACATGGGAAGCATTC...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATCGATACCAGTTGGCTTaGAAATCTATAGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNRYQLA*KSIEPS
Trigger: TGATGGCTCTATAGATTTGCAAGCCAACTGGTATCG...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATGCTTGCTACAGCCCATaGTCATTTCAAACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNACYSP*SFQTAK
Trigger: TTTTGCAGTTTGAAATGAGCATGGGCTGTAGCAAGC...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATACAAGATGCCAGTCCTTaGCATTGTTCAGAGAATACT +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIQDASP*HCSENT
Trigger: AGTATTCTCTGAACAATGGCAAGGACTGGCATCTTG...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAAATTCATCCATCAGGTaGCAAGTGATTCCTCCACTG +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYENSSIR*QVIPPL
Trigger: CAGTGGAGGAATCACTTGGCACCTGATGGATGAATT...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTACAGATCCACAAAGGTaGAGCTTCCCAAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYITDPQR*SFPKCT
Trigger: CGTGCACTTTGGGAAGCTGCACCTTTGTGGATCTGT...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTACAGATCCACAAAGGTaGAGCTTCCCAAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTTDPQR*SFPKCT
Trigger: CGTGCACTTTGGGAAGCTGCACCTTTGTGGATCTGT...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGAGTCTCATGAAGAACTaGACAAATCTAGCATGTGAT +
Preference number: 4 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRSLMKN*TNLACD
Trigger: ATCACATGCTAGATTTGTGCAGTTCTTCATGAGACT...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACATCCCTTACCAATGGGTaGCATGACAATCCAAGATCT +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTSLTNG*HDNPRS
Trigger: AGATCTTGGATTGTCATGGCACCCATTGGTAAGGGA...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTTCTATTGCCCATGTCTaGTGCTTGTCAAAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTISIAHV*CLSKGA
Trigger: AGCTCCTTTTGACAAGCAGCAGACATGGGCAATAGA...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATCACTGCACATGTCTATaGAGCCATCCCCGATATAGA +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYHCTCL*SHPRYR
Trigger: TCTATATCGGGGATGGCTGCATAGACATGTGCAGTG...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTACACTGCACATGTCTATaGAGCCATCCCCGATATAGA +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLHCTCL*SHPRYR
Trigger: TCTATATCGGGGATGGCTGCATAGACATGTGCAGTG...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTATCTCCCATGGCCACTaGACATGTCTATGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTISHGH*TCLCSH
Trigger: ATGGCTGCATAGACATGTGCAGTGGCCATGGGAGAT...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGTCATGGAATAGCCAGTaGTCATTCACTGAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKSWNSQ*SFTEVL
Trigger: CAAAACTTCAGTGAATGAGCACTGGCTATTCCATGA...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTACTGAGATCTTGAATTaGATAATCCAGCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLTEILN*IIQPSV
Trigger: CACTGAAGGCTGGATTATGCAATTCAAGATCTCAGT...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGAATTCCACACTCAGTaGAAGTACTTCCACCTTCTA +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVREFHTQ*KYFHLL
Trigger: TAGAAGGTGGAAGTACTTGCACTGAGTGTGGAATTC...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAATCCCCCAAAATAGAGTaGAGTGTCCTCGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKSPKIE*SVLGKN
Trigger: ATTCTTGCCGAGGACACTGCACTCTATTTTGGGGGA...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTTCCCCCAAAATAGAGTaGAGTGTCCTCGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSISPKIE*SVLGKN
Trigger: ATTCTTGCCGAGGACACTGCACTCTATTTTGGGGGA...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTCTGATCACAAAAGGCTaGCACCAGCGAAGTCGAGTT +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCALITKG*HQRSRV
Trigger: AACTCGACTTCGCTGGTGGCAGCCTTTTGTGATCAG...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCGCTGGGATTGATTTCTaGTCCACCAATCAAAATGTT +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSAGIDF*STNQNV
Trigger: AACATTTTGATTGGTGGAGCAGAAATCAATCCCAGC...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACATTGCCACAAAATCCTaGTGTCCTTACAGCATTAGG +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNIATKS*CPYSIR
Trigger: CCTAATGCTGTAAGGACAGCAGGATTTTGTGGCAAT...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAGGTGAAAGGATGGATTaGCACAAAATCCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLGERMD*HKILLS
Trigger: GGACAGCAGGATTTTGTGGCAATCCATCCTTTCACC...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGGGTGAAAGGATGGATTaGCACAAAATCCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPGERMD*HKILLS
Trigger: GGACAGCAGGATTTTGTGGCAATCCATCCTTTCACC...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGGTACACGTGGTCAATTaGCCAGCTTTGCTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWVHVVN*PALLLS
Trigger: ACTGAGAAGCAAAGCTGGGCAATTGACCACGTGTAC...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAGACATGCTCCCAATTTaGAAAACAAACATGATTTTG +
Preference number: 4 (lower is better)
Translates to: TLECNLSVTQIAFRATGPDMLPI*KTNMIL
Trigger: CAAAATCATGTTTGTTTTGCAAATTGGGAGCATGTC...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATATGGTTCACCCTAGAGTaGAACCTTTCAGTTACACAA +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIWFTLE*NLSVTQ
Trigger: TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCA...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAAACTGGTTACCAAACTaGTGGTCAGACATGATCCCA +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTNWLPN*WSDMIP
Trigger: TGGGATCATGTCTGACCACCAGTTTGGTAACCAGTT...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTCTTTGAAAATAACCTaGCCCCGGTGTGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFISLKIT*PRCVAV
Trigger: TACAGCAACACACCGGGGCCAGGTTATTTTCAAAGA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTTGTTCACACAACTGCTaGGCTAAAGCATCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLCSHNC*AKASLK
Trigger: TTTCAAAGATGCTTTAGCCCAGCAGTTGTGTGAACA...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAGTGACATCTGTTaGAGCTCCTTGTTCACACAA +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIHSDIC*SSLFTQ
Trigger: TTGTGTGAACAAGGAGCTCCAACAGATGTCACTGTG...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACGACCCAATGGAAAATTaGAGGACAGAAGCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNDPMEN*RTEAVV
Trigger: AACAACAGCTTCTGTCCTCCAATTTTCCATTGGGTC...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAATGAACCTGACCCAATaGAAAATTGGAGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKMNLTQ*KIGGQK
Trigger: CTTCTGTCCTCCAATTTTCCATTGGGTCAGGTTCAT...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGCTTAACTGTAGCTCCTaGGAAGAAAAGCCAGTTGCC +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWLNCSS*EEKPVA
Trigger: GGCAACTGGCTTTTCTTCCCAGGAGCTACAGTTAAG...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCTTCCATGGAAATAAATaGAGTTCCCATCTGACTGAC +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSFHGNK*SSHLTD
Trigger: GTCAGTCAGATGGGAACTCCATTTATTTCCATGGAA...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTCTTGAATATCTTCTGTaGAAAGATCTACATCCCTGG +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLLEYLL*KDLHPW
Trigger: CCAGGGATGTAGATCTTTCCACAGAAGATATTCAAG...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGATCCCATCCTGTAGGCTaGCTCTCAAATTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGSHPVG*LSNSSD
Trigger: GTCAGAAGAATTTGAGAGCCAGCCTACAGGATGGGA...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTCCCATCCTGTAGGCTaGCTCTCAAATTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWSHPVG*LSNSSD
Trigger: GTCAGAAGAATTTGAGAGCCAGCCTACAGGATGGGA...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAACAACTTGGCATACTTaGAAGGCATTCTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKTTWHT*KAFFLD
Trigger: GTCCAAGAAGAATGCCTTCCAAGTATGCCAAGTTGT...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAGACTCCCAGCCATTCTaGTTCTCAAAATCTGACATA +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKDSQPF*FSKSDI
Trigger: TATGTCAGATTTTGAGAACCAGAATGGCTGGGAGTC...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTGGTCTTGGCAGCAGCTaGAAGCTCCAGATAGACAAA +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIGLGSS*KLQIDK
Trigger: TTTGTCTATCTGGAGCTTCCAGCTGCTGCCAAGACC...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCAGTTGGATTGATAACTaGGATGATCTGCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSSWIDN*DDLLLL
Trigger: AAGCAGAAGCAGATCATCCCAGTTATCAATCCAACT...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAGTACTGAAGAAGAACTaGAGCAGTACTGCTGAATTG +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIVLKKN*SSTAEL
Trigger: CAATTCAGCAGTACTGCTCCAGTTCTTCTTCAGTAC...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGGTACTGAAGAAGAACTaGAGCAGTACTGCTGAATTG +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQVLKKN*SSTAEL
Trigger: CAATTCAGCAGTACTGCTCCAGTTCTTCTTCAGTAC...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTACTGTGTGATACATGGTaGGCTCACTTAGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLLCDTW*AHLVLW
Trigger: CCAGAGAACTAAGTGAGCCCACCATGTATCACACAG...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCTGTGTGATACATGGTaGGCTCACTTAGTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPLCDTW*AHLVLW
Trigger: CCAGAGAACTAAGTGAGCCCACCATGTATCACACAG...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTCCCCTGTGTGATACATaGTGGGCTCACTTAGTTCTC +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAPLCDT*WAHLVL
Trigger: GAGAACTAAGTGAGCCCACCATGTATCACACAGGGG...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAGGAATCTGGTCTTGCTaGATGCAAGAGACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKGIWSC*MQETLE
Trigger: TTCCAAGGTCTCTTGCATCCAGCAAGACCAGATTCC...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGGGAATCTGGTCTTGCTaGATGCAAGAGACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKGIWSC*MQETLE
Trigger: TTCCAAGGTCTCTTGCATCCAGCAAGACCAGATTCC...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAGGATCCATCGGAATCTaGTCTTGCTGGATGCAAGAG +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTGSIGI*SCWMQE
Trigger: CTCTTGCATCCAGCAAGACCAGATTCCGATGGATCC...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTCAGCCAGTTCCAACCTaGGCACCTGTTATCTTGTAC +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIQPVPT*APVILY
Trigger: GTACAAGATAACAGGTGCCCAGGTTGGAACTGGCTG...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCAATGGAAATGATCTGTaGTTCCAGGAAGGACATGAA +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSNGNDL*FQEGHE
Trigger: TTCATGTCCTTCCTGGAACCACAGATCATTTCCATT...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGAATGGAAATGATCTGTaGTTCCAGGAAGGACATGAA +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKNGNDL*FQEGHE
Trigger: TTCATGTCCTTCCTGGAACCACAGATCATTTCCATT...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAGAGTGAGATCTCTCTaGGGTACTTTTTGCTATAAA +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTRVRSL*GTFCYK
Trigger: TTTATAGCAAAAAGTACCCCAGAGAGATCTCACTCT...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCACTTGTAGCATTGGTTTaGGCAGTGTATGGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSLVALV*AVYGKG
Trigger: TCCCTTGCCATACACTGCCCAAACCAATGCTACAAG...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAACCAATTGTCTTCTCTaGGCCCAAAATCAAATGTAT +
Preference number: 4 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTTNCLL*AQNQMY
Trigger: ATACATTTGATTTTGGGCCCAGAGAAGACAATTGGT...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAACTTGTCAAAAGGAGCTaGTTGATGCCAACGGAAACG +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKLVKRS*LMPTET
Trigger: CGTTTCCGTTGGCATCAACCAGCTCCTTTTGACAAG...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTTGGATGCATCTCCCATaGCCACTGCACATGTCTATG +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTWMHLP*PLHMSM
Trigger: CATAGACATGTGCAGTGGCCATGGGAGATGCATCCA...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCCAGTTCTGACTGGATaGAGCTCGATTGAAGTTGTC +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPPVLTG*SSIEVV
Trigger: GACAACTTCAATCGAGCTCCATCCAGTCAGAACTGG...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACTTGGTTACGGTTGTTTaGTGTAATCAGGCACCCATA +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHLVTVV*CNQAPI
Trigger: TATGGGTGCCTGATTACACCAAACAACCGTAACCAA...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATATCCAAGAGAACACCTTaGTTACGGTTGTTTGGTGTA +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIISKRTP*LRLFGV
Trigger: TACACCAAACAACCGTAACCAAGGTGTTCTCTTGGA...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACTGGAAAGAATACAGATaGCTGAGAAACACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYWKEYR*LRNTSR
Trigger: TCTGGAAGTGTTTCTCAGCCATCTGTATTCTTTCCA...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGGAAAGAATACAGATaGCTGAGAAACACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSWKEYR*LRNTSR
Trigger: TCTGGAAGTGTTTCTCAGCCATCTGTATTCTTTCCA...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTCTTAAGCAATCTCCATaGCCCCTGCAGTTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTLKQSP*PLQLSK
Trigger: CTTGGACAACTGCAGGGGCCATGGAGATTGCTTAAG...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAAAGTGTCCACCAATTaGCTGGGATTGATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHKVSTN*LGLISA
Trigger: AGCAGAAATCAATCCCAGCCAATTGGTGGACACTTT...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACCTGCATCATGTATCCTaGCTGTATAATGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNLHHVS*LYNEFS
Trigger: CGAGAACTCATTATACAGCCAGGATACATGATGCAG...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAATCTCCAATGTACACGTaGTCAATTGCCCAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKSPMYT*SIAQLC
Trigger: GCAAAGCTGGGCAATTGACCACGTGTACATTGGAGA...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATATGGGAACTTATTTGTaGGAGATAGGGTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNMGTYL*EIGSSS
Trigger: GGATGAAGACCCTATCTCCCACAAATAAGTTCCCAT...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACATGGGCTTTTATAGCTTaGTTCACCCTAGAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTWAFIA*FTLECN
Trigger: GTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCA...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGTGTGGCATCAATATGTaGTTTATGAGAGTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKCGINM*FMRVSL
Trigger: TAGGCTCACTCTCATAAACCACATATTGATGCCACA...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429186.2
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAATGGCATATAACACGATaGTGCTGGGGTCTGAATAAC +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKWHITR*CWGLNN
Trigger: GTTATTCAGACCCCAGCATCATCGTGTTATATGCCA...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGACTTGTCTGTGAGCTaGATTGATGATCAAGATGTT +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRDLSVS*IDDQDV
Trigger: AACATCTTGATCATCAATTCAGCTCACAGACAAGTC...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAGAGTTCCCATCTGACTaGCAGCTATGCTTAACTGTA +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSEFPSD*QLCLTV
Trigger: TACAGTTAAGCATAGCTGTCAGTCAGATGGGAACTC...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGGAGTTCCCATCTGACTaGCAGCTATGCTTAACTGTA +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKEFPSD*QLCLTV
Trigger: TACAGTTAAGCATAGCTGTCAGTCAGATGGGAACTC...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTTGGTGGTGGCAAAATTaGACTCGCTGCCTTCATTTC +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAWWWQN*TRCLHF
Trigger: GAAATGAAGGCAGCGAGTTCAATTTTGCCACCACCA...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATTCTGACCATTGCTCTTaGATATCTTCTGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNSDHCS*ISSVER
Trigger: TCTTTCCACAGAAGATATTCAAGAGCAATGGTCAGA...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGTCCTCTCTCCATCTTTaGGGAAGACCATTGATAAGC +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPSSLHL*GRPLIS
Trigger: GCTTATCAATGGTCTTCCTCAAAGATGGAGAGAGGA...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAATCCTCTCTCCATCTTTaGGGAAGACCATTGATAAGC +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKSSLHL*GRPLIS
Trigger: GCTTATCAATGGTCTTCCTCAAAGATGGAGAGAGGA...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTTTGGTAGCAGGAGTCTaGAGTTCAGGATTGATGACC +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCALVAGV*SSGLMT
Trigger: GGTCATCAATCCTGAACTTCAGACTCCTGCTACCAA...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGATTCCTATTATGTCCTTaGTGGTTCTTTTGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRFLLCP*WFFCLR
Trigger: TCTCAGGCAAAAGAACCATCAAGGACATAATAGGAA...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAAAAGATGTAATTAGCTaGCGCCGCCCATCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSKDVIS*RRPSLL
Trigger: CAACAAAGATGGGCGGCGTCAGCTAATTACATCTTT...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTAAAGATGTAATTAGCTaGCGCCGCCCATCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIKDVIS*RRPSLL
Trigger: CAACAAAGATGGGCGGCGTCAGCTAATTACATCTTT...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGGAGAAACCTGGATTGTaGGCTGTCAAGGAAAGATGT +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPEKPGL*AVKERC
Trigger: ACATCTTTCCTTGACAGCTCACAATCCAGGTTTCTC...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAATGATAGCTGAGATATaGATAATGCTCCAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVMIAEI*IMLQEF
Trigger: AAACTCCTGGAGCATTATTCATATCTCAGCTATCAT...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGCCACCATCTGAACTaGATTCCAAACTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWCHHLN*IPNCFA
Trigger: TGCAAAGCAGTTTGGAATTCAGTTCAGATGGTGGCA...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCACATAGCGCATACTTaGGGCAAGTTTAGAATCTCC +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPHIAHT*GKFRIS
Trigger: GGAGATTCTAAACTTGCCTCAAGTATGCGCTATGTG...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGCTCCTATCTGCATTaGTTGTGTTTCCACATAGCG +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWCSYLH*LCFHIA
Trigger: CGCTATGTGGAAACACAATCAATGCAGATAGGAGCA...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTTGCTCCTATCTGCATTaGTTGTGTTTCCACATAGCG +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSICSYLH*LCFHIA
Trigger: CGCTATGTGGAAACACAATCAATGCAGATAGGAGCA...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAATCCCATCACCAAACTaGACTGAATCATATAGGATG +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKIPSPN*TESYRM
Trigger: CATCCTATATGATTCAGTTCAGTTTGGTGATGGGAT...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTTTTTCCCAGCCTTGCTaGAGTACAGAGATGATCCAG +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTFSQPC*STEMIQ
Trigger: CTGGATCATCTCTGTACTTCAGCAAGGCTGGGAAAA...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTTTTTCCCAGCCTTGCTaGAGTACAGAGATGATCCAG +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIFSQPC*STEMIQ
Trigger: CTGGATCATCTCTGTACTTCAGCAAGGCTGGGAAAA...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAACCTATGTTTAGCTTaGACTGTAGCACATATCCAG +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQNLCLA*TVAHIQ
Trigger: CTGGATATGTGCTACAGTTCAAGCTAAACATAGGTT...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAGCAGTACTGCTGAATTaGTTGGCACAACCTATGTTT +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTAVLLN*LAQPMF
Trigger: AAACATAGGTTGTGCCAATCAATTCAGCAGTACTGC...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTTTCCCAGGGCCATTaGAGTAGAGAGATTTGCCAT +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPFSQGH*SREICH
Trigger: ATGGCAAATCTCTCTACTTCAATGGCCCTGGGAAAA...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTTTTCCCAGGGCCATTaGAGTAGAGAGATTTGCCAT +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWFSQGH*SREICH
Trigger: ATGGCAAATCTCTCTACTTCAATGGCCCTGGGAAAA...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTATTTTCCCAGGGCCATTaGAGTAGAGAGATTTGCCAT +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLFSQGH*SREICH
Trigger: ATGGCAAATCTCTCTACTTCAATGGCCCTGGGAAAA...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAAAATTGAACAAGTCTaGTATTCCTGGTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNKIEQV*YSWCPE
Trigger: CTCTGGACACCAGGAATATCAGACTTGTTCAATTTT...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAGATGCAGGTAATGCCTaGAGTTTTGCTTCCAATTTG +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTDAGNA*SFASNL
Trigger: CAAATTGGAAGCAAAACTTCAGGCATTACCTGCATC...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAGTAGATGCTGACACATaGAAATCCCAGGTCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTVDADT*KSQVSA
Trigger: TGCTGAGACCTGGGATTTTCATGTGTCAGCATCTAC...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATTCCGAGGTGTAAATTaGACTTTCCGTGTAATGCAG +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEFRGVN*TFRVMQ
Trigger: CTGCATTACACGGAAAGTTCAATTTACACCTCGGAA...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTGTAACAGAATAGAGTaGGATCTCTCTGGGGTACTT +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFICNRIE*DLSGVL
Trigger: AAGTACCCCAGAGAGATCTCACTCTATTCTGTTACA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTTCAGGTGCCCCCTTTaGAGAATATGGACAATAAAG +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIFRCPL*RIWTIK
Trigger: CTTTATTGTCCATATTCTTCAAAGGGGGCACCTGAA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAACATTGCTGGAATTGCTaGAAAGGAACTCCTGAAGAA +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEHCWNC*KGTPEE
Trigger: TTCTTCAGGAGTTCCTTTTCAGCAATTCCAGCAATG...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATCAATCCAAGATCTACTaGGTATTCCAATTCAATCGC +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNQSKIY*VFQFNR
Trigger: GCGATTGAATTGGAATACTCAGTAGATCTTGGATTG...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACGGTTTAGATCCACAGTaGCTAATAATCGACTACAAC +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNGLDPQ*LIIDYN
Trigger: GTTGTAGTCGATTATTAGTCACTGTGGATCTAAACC...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATCCAGTGCTCATTCACTaGAGTTTTGTCTTCCATAAA +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNPVLIH*SFVFHK
Trigger: TTTATGGAAGACAAAACTTCAGTGAATGAGCACTGG...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAAAGAATACAGATGGCTaGGAAACACTTCCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEKNTDG*ETLPEH
Trigger: ATGCTCTGGAAGTGTTTCTCAGCCATCTGTATTCTT...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCAAGAATACAGATGGCTaGGAAACACTTCCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIKNTDG*ETLPEH
Trigger: ATGCTCTGGAAGTGTTTCTCAGCCATCTGTATTCTT...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTTGCCCACTGCATGTCTaGGTACTTCTGATAGAACCT +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTCPLHV*VLLIEP
Trigger: AGGTTCTATCAGAAGTACTCAGACATGCAGTGGGCA...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTGAGGAGAGAGCATTGTaGGTCTTGTCCTTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIEERAL*VLSFFL
Trigger: TAAAAAGAAGGACAAGACTCACAATGCTCTCTCCTC...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAGCTGCTTGCCTGATCTaGCAGCCATTAAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTAACLI*QPLKYS
Trigger: ACTGTACTTTAATGGCTGTCAGATCAGGCAAGCAGC...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTGCTGCTTGCCTGATCTaGCAGCCATTAAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTAACLI*QPLKYS
Trigger: ACTGTACTTTAATGGCTGTCAGATCAGGCAAGCAGC...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTGAGCCCATGTTGTCGTaGAAAATTCATCATGTAATT +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSEPMLS*KIHHVI
Trigger: AATTACATGATGAATTTTTCACGACAACATGGGCTC...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCGAGCCCATGTTGTCGTaGAAAATTCATCATGTAATT +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSEPMLS*KIHHVI
Trigger: AATTACATGATGAATTTTTCACGACAACATGGGCTC...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGCCCATGTTGTCGTaGAAAATTCATCATGTAATT +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLEPMLS*KIHHVI
Trigger: AATTACATGATGAATTTTTCACGACAACATGGGCTC...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACGAGCCCATGTTGTCGTaGAAAATTCATCATGTAATT +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYEPMLS*KIHHVI
Trigger: AATTACATGATGAATTTTTCACGACAACATGGGCTC...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTTGTTGTAGAAATGTCTaGGCCCATGTTGTCGTGAAA +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTICCRNV*AHVVVK
Trigger: TTTCACGACAACATGGGCTCAGACATTTCTACAACA...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTGTGTACACTCGGTCTTaGGAAGGGCTTTCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIVYTRS*EGLSGN
Trigger: ATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACAC...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTGTGTACACTCGGTCTTaGGAAGGGCTTTCAGGTAAT +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTVYTRS*EGLSGN
Trigger: ATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACAC...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCTACTGCCACTGTAACTaGTATTACAACAGATCACAA +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSYCHCN*YYNRSQ
Trigger: TTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTA...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTTACTGCCACTGTAACTaGTATTACAACAGATCACAA +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLYCHCN*YYNRSQ
Trigger: TTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTA...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACTTTGTTTGCGAGTGCTaGGTGACAATATATCCATAT +
Preference number: 4 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYFVCEC*VTIYPY
Trigger: ATATGGATATATTGTCACTCAGCACTCGCAAACAAA...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429186.2
CDS-3UTR GCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGACCTTGTTCACACAACTaGTGGGCTAAAGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGPCSHN*WAKASL
Trigger: CAAAGATGCTTTAGCCCAGCAGTTGTGTGAACAAGG...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTCTGGTCTTGCTGGATaGAAGAGACCTTGGAATAAC +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWSGLAG*KRPWNN
Trigger: GTTATTCCAAGGTCTCTTGCATCCAGCAAGACCAGA...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAAACTCTCGAAGCAAATaGCAGAGTATCCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTNSRSK*QSIPLS
Trigger: TGACAATGGGATACTCTGGCATTTGCTTCGAGAGTT...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCGATACCAGTTGGCTTaGAAATCTATAGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIRYQLA*KSIEPS
Trigger: TGATGGCTCTATAGATTTGCAAGCCAACTGGTATCG...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAAATTCATCCATCAGGTaGCAAGTGATTCCTCCACTG +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSNSSIR*QVIPPL
Trigger: CAGTGGAGGAATCACTTGGCACCTGATGGATGAATT...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTAATTCATCCATCAGGTaGCAAGTGATTCCTCCACTG +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSINSSIR*QVIPPL
Trigger: CAGTGGAGGAATCACTTGGCACCTGATGGATGAATT...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATTCCCTTACCAATGGGTaGCATGACAATCCAAGATCT +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYSLTNG*HDNPRS
Trigger: AGATCTTGGATTGTCATGGCACCCATTGGTAAGGGA...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTTCCCTTACCAATGGGTaGCATGACAATCCAAGATCT +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSISLTNG*HDNPRS
Trigger: AGATCTTGGATTGTCATGGCACCCATTGGTAAGGGA...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTATTGCCCATGTCTGCTaGTTGTCAAAAGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIIAHVC*LSKGAG
Trigger: ACCAGCTCCTTTTGACAAGCAGCAGACATGGGCAAT...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTTCTATTGCCCATGTCTaGTGCTTGTCAAAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSISIAHV*CLSKGA
Trigger: AGCTCCTTTTGACAAGCAGCAGACATGGGCAATAGA...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAACTGAGATCTTGAATTaGATAATCCAGCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRTEILN*IIQPSV
Trigger: CACTGAAGGCTGGATTATGCAATTCAAGATCTCAGT...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGATCCCGGATCACAGATaGACTGTTCCCTTAAGCAAT +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWIPDHR*TVPLSN
Trigger: ATTGCTTAAGGGAACAGTGCATCTGTGATCCGGGAT...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAATCCCGGATCACAGATaGACTGTTCCCTTAAGCAAT +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGIPDHR*TVPLSN
Trigger: ATTGCTTAAGGGAACAGTGCATCTGTGATCCGGGAT...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGATCCCGGATCACAGATaGACTGTTCCCTTAAGCAAT +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKIPDHR*TVPLSN
Trigger: ATTGCTTAAGGGAACAGTGCATCTGTGATCCGGGAT...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAGAATTCCACACTCAGTaGAAGTACTTCCACCTTCTA +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEEFHTQ*KYFHLL
Trigger: TAGAAGGTGGAAGTACTTGCACTGAGTGTGGAATTC...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTGTATTGCAGGAACTTTaGACCTCGAAGATCCAAATC +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIVLQEL*TSKIQI
Trigger: GATTTGGATCTTCGAGGTGCAAAGTTCCTGCAATAC...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAGCTGGGATTGATTTCTaGTCCACCAATCAAAATGTT +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIAGIDF*STNQNV
Trigger: AACATTTTGATTGGTGGAGCAGAAATCAATCCCAGC...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGGCTGGGATTGATTTCTaGTCCACCAATCAAAATGTT +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQAGIDF*STNQNV
Trigger: AACATTTTGATTGGTGGAGCAGAAATCAATCCCAGC...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCTTTCTTCATGGGAAGTaGCTTCATCATCAAAAGTGT +
Preference number: 4 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSFLHGK*LHHQKC
Trigger: ACACTTTTGATGATGAAGGCACTTCCCATGAAGAAA...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTACCACAATTTTAAACTaGATCATGTATCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSTTILN*IMYPGC
Trigger: ACAGCCAGGATACATGATGCAGTTTAAAATTGTGGT...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTGTACACGTGGTCAATTaGCCAGCTTTGCTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIVHVVN*PALLLS
Trigger: ACTGAGAAGCAAAGCTGGGCAATTGACCACGTGTAC...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTGGTTCACCCTAGAGTaGAACCTTTCAGTTACACAA +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIWFTLE*NLSVTQ
Trigger: TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAATGCCTTTCAATGCATaGAGCACTGTGATTAGTCAT +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIMPFNA*STVISH
Trigger: ATGACTAATCACAGTGCTGCATGCATTGAAAGGCAT...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424685.3
ENST00000681034.1
CDS-3UTR GCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTTTTCATCTCTCTCCTTaGCAACCACTTGGAGCCATC +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTFHLSP*QPLGAI
Trigger: GATGGCTCCAAGTGGTTGGCAAGGAGAGAGATGAAA...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681034.1
CDS-3UTR CCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAGTTGAAATTGTCACATaGTATTCTTGTCCCGGAACG +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTVEIVT*YSCPGT
Trigger: CGTTCCGGGACAAGAATACCATGTGACAATTTCAAC...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGTCTTTGAAAATAACCTaGCCCCGGTGTGTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKSLKIT*PRCVAV
Trigger: TACAGCAACACACCGGGGCCAGGTTATTTTCAAAGA...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGCACAGTGACATCTGTTaGAGCTCCTTGTTCACACAA +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKHSDIC*SSLFTQ
Trigger: TTGTGTGAACAAGGAGCTCCAACAGATGTCACTGTG...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCACAGTGACATCTGTTaGAGCTCCTTGTTCACACAA +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPHSDIC*SSLFTQ
Trigger: TTGTGTGAACAAGGAGCTCCAACAGATGTCACTGTG...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAGGTAATCAGTTCTCGTaGGCCATATGGTTCACAGAA +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGGNQFS*AIWFTE
Trigger: TTCTGTGAACCATATGGCCCACGAGAACTGATTACC...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGGTAATCAGTTCTCGTaGGCCATATGGTTCACAGAA +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYGNQFS*AIWFTE
Trigger: TTCTGTGAACCATATGGCCCACGAGAACTGATTACC...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTCTTAACTGTAGCTCCTaGGAAGAAAAGCCAGTTGCC +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYILNCSS*EEKPVA
Trigger: GGCAACTGGCTTTTCTTCCCAGGAGCTACAGTTAAG...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGACTTGAATATCTTCTGTaGAAAGATCTACATCCCTGG +
Preference number: 4 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRLEYLL*KDLHPW
Trigger: CCAGGGATGTAGATCTTTCCACAGAAGATATTCAAG...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAAGAACAGGCAAGACATaGAAAAAGTCTACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGRTGKT*KKSTAQ
Trigger: CTGGGCTGTAGACTTTTTCCATGTCTTGCCTGTTCT...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAGAACAGGCAAGACATaGAAAAAGTCTACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLRTGKT*KKSTAQ
Trigger: CTGGGCTGTAGACTTTTTCCATGTCTTGCCTGTTCT...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACACATGTTTCCAAGGATTaGTCCTGTTTGTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTHVSKD*SCLSPA
Trigger: CGCTGGAGACAAACAGGACCAATCCTTGGAAACATG...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAAACATTGGGAATGTCTaGGATGCCATCTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKNIGNV*DAISQA
Trigger: AGCTTGTGAGATGGCATCCCAGACATTCCCAATGTT...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATGTGGGGTGTATTTCTaGCCACATCCCATCACCAAA +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTCGVYF*PHPITK
Trigger: TTTGGTGATGGGATGTGGCCAGAAATACACCCCACA...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCTGGACCAAGTTTTCTaGGGAAGAAGCACTATGACT +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSILDQVF*GRSTMT
Trigger: AGTCATAGTGCTTCTTCCCCAGAAAACTTGGTCCAG...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAGACTCCCAGCCATTCTaGTTCTCAAAATCTGACATA +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEDSQPF*FSKSDI
Trigger: TATGTCAGATTTTGAGAACCAGAATGGCTGGGAGTC...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGGCTCACTTAGTTCTCTaGAGTTTCCTTCGCATCCTT +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWAHLVL*SFLRIL
Trigger: AAGGATGCGAAGGAAACTCCAGAGAACTAAGTGAGC...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAGGATGCAAGAGACCTTaGAATAACAATGGTGATTCT +
Preference number: 4 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKGCKRP*NNNGDS
Trigger: AGAATCACCATTGTTATTCCAAGGTCTCTTGCATCC...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTGGAATCTGGTCTTGCTaGATGCAAGAGACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIGIWSC*MQETLE
Trigger: TTCCAAGGTCTCTTGCATCCAGCAAGACCAGATTCC...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGTTGTTCAGAGAATACTaGAGCTGTACACTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPLFREY*SCTLWE
Trigger: CTCCCACAGTGTACAGCTCCAGTATTCTCTGAACAA...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATTGTTCAGAGAATACTaGAGCTGTACACTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSLFREY*SCTLWE
Trigger: CTCCCACAGTGTACAGCTCCAGTATTCTCTGAACAA...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGTTGTTCAGAGAATACTaGAGCTGTACACTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKLFREY*SCTLWE
Trigger: CTCCCACAGTGTACAGCTCCAGTATTCTCTGAACAA...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAAATGCAGACAGCCAATaGTTGGAGGAACACACTCTT +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGNADSQ*LEEHTL
Trigger: AAGAGTGTGTTCCTCCAACCATTGGCTGTCTGCATT...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAAATGCAGACAGCCAATaGTTGGAGGAACACACTCTT +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSNADSQ*LEEHTL
Trigger: AAGAGTGTGTTCCTCCAACCATTGGCTGTCTGCATT...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAGGTTTGGGCAGTGTATaGCAAGGGAACATTGATGAA +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSGLGSV*QGNIDE
Trigger: TTCATCAATGTTCCCTTGCCATACACTGCCCAAACC...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGGGTTTGGGCAGTGTATaGCAAGGGAACATTGATGAA +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPGLGSV*QGNIDE
Trigger: TTCATCAATGTTCCCTTGCCATACACTGCCCAAACC...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTACCAATTGTCTTCTCTaGGCCCAAAATCAAATGTAT +
Preference number: 4 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLTNCLL*AQNQMY
Trigger: ATACATTTGATTTTGGGCCCAGAGAAGACAATTGGT...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACACTTGTCAAAAGGAGCTaGTTGATGCCAACGGAAACG +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTLVKRS*LMPTET
Trigger: CGTTTCCGTTGGCATCAACCAGCTCCTTTTGACAAG...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGAAGTTGTCTTTGAGTTaGGTTGGAAGAGAGGTCTCG +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPKLSLS*VGREVS
Trigger: CGAGACCTCTCTTCCAACCCAACTCAAAGACAACTT...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAAAGTTGTCTTTGAGTTaGGTTGGAAGAGAGGTCTCG +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSKLSLS*VGREVS
Trigger: CGAGACCTCTCTTCCAACCCAACTCAAAGACAACTT...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTTGGTTACGGTTGTTTaGTGTAATCAGGCACCCATA +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFILVTVV*CNQAPI
Trigger: TATGGGTGCCTGATTACACCAAACAACCGTAACCAA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATCCAAGAGAACACCTTaGTTACGGTTGTTTGGTGTA +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYESKRTP*LRLFGV
Trigger: TACACCAAACAACCGTAACCAAGGTGTTCTCTTGGA...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACACTGTACAATCATCATaGAATAGCCAGTGCTCATTC +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHTVQSS*NSQCSF
Trigger: GAATGAGCACTGGCTATTCCATGATGATTGTACAGT...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAACTGCATCATGTATCCTaGCTGTATAATGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYELHHVS*LYNEFS
Trigger: CGAGAACTCATTATACAGCCAGGATACATGATGCAG...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTCAGAGTTGTAGATGGTaGCTTCATGGAACTGGAAAG +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPQSCRW*LHGTGK
Trigger: CTTTCCAGTTCCATGAAGCCACCATCTACAACTCTG...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAACAGAGTTGTAGATGGTaGCTTCATGGAACTGGAAAG +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKQSCRW*LHGTGK
Trigger: CTTTCCAGTTCCATGAAGCCACCATCTACAACTCTG...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATCTCCAATGTACACGTaGTCAATTGCCCAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTSPMYT*SIAQLC
Trigger: GCAAAGCTGGGCAATTGACCACGTGTACATTGGAGA...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTTGGCATATAACACGATaGTGCTGGGGTCTGAATAAC +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTWHITR*CWGLNN
Trigger: GTTATTCAGACCCCAGCATCATCGTGTTATATGCCA...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTTGGCATATAACACGATaGTGCTGGGGTCTGAATAAC +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIWHITR*CWGLNN
Trigger: GTTATTCAGACCCCAGCATCATCGTGTTATATGCCA...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCTAATTTTCTCTAGCTaGATCCAGTCCGCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSILIFSS*IQSAEL
Trigger: TAACTCTGCGGACTGGATTCAGCTAGAGAAAATTAG...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCGACTTGTCTGTGAGCTaGATTGATGATCAAGATGTT +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIDLSVS*IDDQDV
Trigger: AACATCTTGATCATCAATTCAGCTCACAGACAAGTC...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTGAGTTCCCATCTGACTaGCAGCTATGCTTAACTGTA +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTEFPSD*QLCLTV
Trigger: TACAGTTAAGCATAGCTGTCAGTCAGATGGGAACTC...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATCTGACCATTGCTCTTaGATATCTTCTGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYESDHCS*ISSVER
Trigger: TCTTTCCACAGAAGATATTCAAGAGCAATGGTCAGA...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTGCTCTCAAATTCTTCTaGCCATTGCTCTTGAATATC +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIALKFF*PLLLNI
Trigger: GATATTCAAGAGCAATGGTCAGAAGAATTTGAGAGC...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAGCTCTCAAATTCTTCTaGCCATTGCTCTTGAATATC +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEALKFF*PLLLNI
Trigger: GATATTCAAGAGCAATGGTCAGAAGAATTTGAGAGC...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCGCTCTCAAATTCTTCTaGCCATTGCTCTTGAATATC +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIALKFF*PLLLNI
Trigger: GATATTCAAGAGCAATGGTCAGAAGAATTTGAGAGC...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTAAAGATGTAATTAGCTaGCGCCGCCCATCTTTGTTG +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTKDVIS*RRPSLL
Trigger: CAACAAAGATGGGCGGCGTCAGCTAATTACATCTTT...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAATGATAGCTGAGATATaGATAATGCTCCAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIMIAEI*IMLQEF
Trigger: AAACTCCTGGAGCATTATTCATATCTCAGCTATCAT...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTTGCCACCATCTGAACTaGATTCCAAACTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCACHHLN*IPNCFA
Trigger: TGCAAAGCAGTTTGGAATTCAGTTCAGATGGTGGCA...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAAACCTATGTTTAGCTTaGACTGTAGCACATATCCAG +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYENLCLA*TVAHIQ
Trigger: CTGGATATGTGCTACAGTTCAAGCTAAACATAGGTT...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTGCAGTACTGCTGAATTaGTTGGCACAACCTATGTTT +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPAVLLN*LAQPMF
Trigger: AAACATAGGTTGTGCCAATCAATTCAGCAGTACTGC...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCGAACATCTCATTGTaGTTGGGGACATTTGACACA +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSSNISL*LGTFDT
Trigger: TGTGTCAAATGTCCCCAATCACAATGAGATGTTCGA...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATTCGAACATCTCATTGTaGTTGGGGACATTTGACACA +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYSNISL*LGTFDT
Trigger: TGTGTCAAATGTCCCCAATCACAATGAGATGTTCGA...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGGATGCAGGTAATGCCTaGAGTTTTGCTTCCAATTTG +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKDAGNA*SFASNL
Trigger: CAAATTGGAAGCAAAACTTCAGGCATTACCTGCATC...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATTATCCCATTGTCATTTaGATACTGAACAATAAGCCC +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNYPIVI*ILNNKP
Trigger: GGGCTTATTGTTCAGTATTCAAATGACAATGGGATA...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGCAGTCAATATCAACTTaGCCTCCTTGGATTCGATAC +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKQSIST*PPWIRY
Trigger: GTATCGAATCCAAGGAGGTCAAGTTGATATTGACTG...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGTTCCTATGTTTTCAGTaGATATCAGAGCAGTATCCA +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQFLCFQ*ISEQYP
Trigger: TGGATACTGCTCTGATATTCACTGAAAACATAGGAA...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATATTCCTATGTTTTCAGTaGATATCAGAGCAGTATCCA +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIFLCFQ*ISEQYP
Trigger: TGGATACTGCTCTGATATTCACTGAAAACATAGGAA...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAACAAAAAGGTAGATGCTaGCACATGAAAATCCCAGGT +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKQKGRC*HMKIPG
Trigger: ACCTGGGATTTTCATGTGTCAGCATCTACCTTTTTG...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCCGAGGTGTAAATTaGACTTTCCGTGTAATGCAG +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPFRGVN*TFRVMQ
Trigger: CTGCATTACACGGAAAGTTCAATTTACACCTCGGAA...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAATTCAGGTGCCCCCTTTaGAGAATATGGACAATAAAG +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKFRCPL*RIWTIK
Trigger: CTTTATTGTCCATATTCTTCAAAGGGGGCACCTGAA...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATACTATCAAGGGTTGTaGAATCATCTTCCAAGACCG +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSYYQGL*NHLPRP
Trigger: CGGTCTTGGAAGATGATTTCACAACCCTTGATAGTA...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTGGTTTAGATCCACAGTaGCTAATAATCGACTACAAC +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIGLDPQ*LIIDYN
Trigger: GTTGTAGTCGATTATTAGTCACTGTGGATCTAAACC...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAAAGAATACAGATGGCTaGGAAACACTTCCAGAGCAT +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKKNTDG*ETLPEH
Trigger: ATGCTCTGGAAGTGTTTCTCAGCCATCTGTATTCTT...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAGATTCTTTTCCAGCTTaGGCTGTTGACAGAGTTGTA +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLDSFPA*AVDRVV
Trigger: TACAACTCTGTCAACAGCTCAAGCTGGAAAAGAATC...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTGTTGTAGAAATGTCTaGGCCCATGTTGTCGTGAAA +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPCCRNV*AHVVVK
Trigger: TTTCACGACAACATGGGCTCAGACATTTCTACAACA...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTTGTAGAAATGTCTaGGCCCATGTTGTCGTGAAA +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWCCRNV*AHVVVK
Trigger: TTTCACGACAACATGGGCTCAGACATTTCTACAACA...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACTACTGCCACTGTAACTaGTATTACAACAGATCACAA +
Preference number: 4 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHYCHCN*YYNRSQ
Trigger: TTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTA...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTATAACTGGGATGATCTaGTTCTGCTTCTCGGACAGA +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIITGMI*FCFSDR
Trigger: TCTGTCCGAGAAGCAGAAGCAGATCATCCCAGTTAT...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATCTGGTCTTGCTGGATaGAAGAGACCTTGGAATAAC +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTSGLAG*KRPWNN
Trigger: GTTATTCCAAGGTCTCTTGCATCCAGCAAGACCAGA...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGAACTCTCGAAGCAAATaGCAGAGTATCCCATTGTCA +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPNSRSK*QSIPLS
Trigger: TGACAATGGGATACTCTGGCATTTGCTTCGAGAGTT...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGGCTTGCTACAGCCCATaGTCATTTCAAACTGCAAAA +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPACYSP*SFQTAK
Trigger: TTTTGCAGTTTGAAATGAGCATGGGCTGTAGCAAGC...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAAGATGCCAGTCCTTaGCATTGTTCAGAGAATACT +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIQDASP*HCSENT
Trigger: AGTATTCTCTGAACAATGGCAAGGACTGGCATCTTG...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTACAAGATGCCAGTCCTTaGCATTGTTCAGAGAATACT +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLQDASP*HCSENT
Trigger: AGTATTCTCTGAACAATGGCAAGGACTGGCATCTTG...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGTCTCATGAAGAACTaGACAAATCTAGCATGTGAT +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQSLMKN*TNLACD
Trigger: ATCACATGCTAGATTTGTGCAGTTCTTCATGAGACT...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTATAGACATTATCTATTaGCCATGTCTGCTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIIDIIY*PCLLLV
Trigger: GACAAGCAGCAGACATGGGCAATAGATAATGTCTAT...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTTCATGGAATAGCCAGTaGTCATTCACTGAAGTTTTG +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTISWNSQ*SFTEVL
Trigger: CAAAACTTCAGTGAATGAGCACTGGCTATTCCATGA...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAACTGAGATCTTGAATTaGATAATCCAGCCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTTEILN*IIQPSV
Trigger: CACTGAAGGCTGGATTATGCAATTCAAGATCTCAGT...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAGTATTGCAGGAACTTTaGACCTCGAAGATCCAAATC +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSVLQEL*TSKIQI
Trigger: GATTTGGATCTTCGAGGTGCAAAGTTCCTGCAATAC...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATTTTCTTCATGGGAAGTaGCTTCATCATCAAAAGTGT +
Preference number: 4 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNFLHGK*LHHQKC
Trigger: ACACTTTTGATGATGAAGGCACTTCCCATGAAGAAA...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGACCACAATTTTAAACTaGATCATGTATCCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQTTILN*IMYPGC
Trigger: ACAGCCAGGATACATGATGCAGTTTAAAATTGTGGT...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATTGGTTCACCCTAGAGTaGAACCTTTCAGTTACACAA +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYWFTLE*NLSVTQ
Trigger: TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCA...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATATCATGTAATTTTGTTTaGGAGTGCTTACTAGGACGA +
Preference number: 4 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIISCNFV*ECLLGR
Trigger: TCGTCCTAGTAAGCACTCGCAAACAAAATTACATGA...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428762.6
CDS-3UTR CCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGGTTGAAATTGTCACATaGTATTCTTGTCCCGGAACG +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWVEIVT*YSCPGT
Trigger: CGTTCCGGGACAAGAATACCATGTGACAATTTCAAC...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAGTTGAAATTGTCACATaGTATTCTTGTCCCGGAACG +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLVEIVT*YSCPGT
Trigger: CGTTCCGGGACAAGAATACCATGTGACAATTTCAAC...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTGTTCACACAACTGCTaGGCTAAAGCATCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFICSHNC*AKASLK
Trigger: TTTCAAAGATGCTTTAGCCCAGCAGTTGTGTGAACA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAGACCCAATGGAAAATTaGAGGACAGAAGCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLDPMEN*RTEAVV
Trigger: AACAACAGCTTCTGTCCTCCAATTTTCCATTGGGTC...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTTCCATGGAAATAAATaGAGTTCCCATCTGACTGAC +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIFHGNK*SSHLTD
Trigger: GTCAGTCAGATGGGAACTCCATTTATTTCCATGGAA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTAACATTGGGAATGTCTaGGATGCCATCTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCANIGNV*DAISQA
Trigger: AGCTTGTGAGATGGCATCCCAGACATTCCCAATGTT...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTCTGGACCAAGTTTTCTaGGGAAGAAGCACTATGACT +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTLDQVF*GRSTMT
Trigger: AGTCATAGTGCTTCTTCCCCAGAAAACTTGGTCCAG...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTGACTCCCAGCCATTCTaGTTCTCAAAATCTGACATA +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIDSQPF*FSKSDI
Trigger: TATGTCAGATTTTGAGAACCAGAATGGCTGGGAGTC...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCAGTTGGATTGATAACTaGGATGATCTGCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFISWIDN*DDLLLL
Trigger: AAGCAGAAGCAGATCATCCCAGTTATCAATCCAACT...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTTCATTGCTGATGGTGTaGCAGCACAGAAGGTTTCAT +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYISLLMV*QHRRFH
Trigger: ATGAAACCTTCTGTGCTGCCACACCATCAGCAATGA...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAGTACTGAAGAAGAACTaGAGCAGTACTGCTGAATTG +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKVLKKN*SSTAEL
Trigger: CAATTCAGCAGTACTGCTCCAGTTCTTCTTCAGTAC...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTGCTCACTTAGTTCTCTaGAGTTTCCTTCGCATCCTT +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAAHLVL*SFLRIL
Trigger: AAGGATGCGAAGGAAACTCCAGAGAACTAAGTGAGC...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCGGATGCAAGAGACCTTaGAATAACAATGGTGATTCT +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIGCKRP*NNNGDS
Trigger: AGAATCACCATTGTTATTCCAAGGTCTCTTGCATCC...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTTTGTTCAGAGAATACTaGAGCTGTACACTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCALFREY*SCTLWE
Trigger: CTCCCACAGTGTACAGCTCCAGTATTCTCTGAACAA...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTTTGGTTACGGTTGTTTaGTGTAATCAGGCACCCATA +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSILVTVV*CNQAPI
Trigger: TATGGGTGCCTGATTACACCAAACAACCGTAACCAA...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAACTGTACAATCATCATaGAATAGCCAGTGCTCATTC +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYETVQSS*NSQCSF
Trigger: GAATGAGCACTGGCTATTCCATGATGATTGTACAGT...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGATAGAGGTGAAAGGATaGATTGCCACAAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPIEVKG*IATKSC
Trigger: GCAGGATTTTGTGGCAATCCATCCTTTCACCTCTAT...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGATAGAGGTGAAAGGATaGATTGCCACAAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKIEVKG*IATKSC
Trigger: GCAGGATTTTGTGGCAATCCATCCTTTCACCTCTAT...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCTGCATCATGTATCCTaGCTGTATAATGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSILHHVS*LYNEFS
Trigger: CGAGAACTCATTATACAGCCAGGATACATGATGCAG...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTCAGAGTTGTAGATGGTaGCTTCATGGAACTGGAAAG +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIQSCRW*LHGTGK
Trigger: CTTTCCAGTTCCATGAAGCCACCATCTACAACTCTG...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAATGGGAACTTATTTGTaGGAGATAGGGTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLMGTYL*EIGSSS
Trigger: GGATGAAGACCCTATCTCCCACAAATAAGTTCCCAT...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTATGGGAACTTATTTGTaGGAGATAGGGTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIMGTYL*EIGSSS
Trigger: GGATGAAGACCCTATCTCCCACAAATAAGTTCCCAT...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGATGGGAACTTATTTGTaGGAGATAGGGTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPMGTYL*EIGSSS
Trigger: GGATGAAGACCCTATCTCCCACAAATAAGTTCCCAT...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATGGGCTTTTATAGCTTaGTTCACCCTAGAGTGCAAC +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTWAFIA*FTLECN
Trigger: GTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCA...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
3UTR CAA 72 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTaGCTGGTGTTGTACAACTTCATCAGAAGGTATGAA +
Preference number: 4 (lower is better)
Translates to: TNSIQSYRAIIM*LVLYNFIRRYE
Trigger: TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTGACTTGTCTGTGAGCTaGATTGATGATCAAGATGTT +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIDLSVS*IDDQDV
Trigger: AACATCTTGATCATCAATTCAGCTCACAGACAAGTC...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACTTGTCTGTGAGCTaGATTGATGATCAAGATGTT +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYDLSVS*IDDQDV
Trigger: AACATCTTGATCATCAATTCAGCTCACAGACAAGTC...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTAAAACGACTTGTCTGTaGGCTGAATTGATGATCAAG +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPKTTCL*AELMIK
Trigger: CTTGATCATCAATTCAGCTCACAGACAAGTCGTTTT...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGTCTGACCATTGCTCTTaGATATCTTCTGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKSDHCS*ISSVER
Trigger: TCTTTCCACAGAAGATATTCAAGAGCAATGGTCAGA...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTTTCCTATTATGTCCTTaGTGGTTCTTTTGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIFLLCP*WFFCLR
Trigger: TCTCAGGCAAAAGAACCATCAAGGACATAATAGGAA...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATTCCACATCCCAGATTaGTGGAAAACTGTATCATGT +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSFHIPD*WKTVSC
Trigger: ACATGATACAGTTTTCCATCAATCTGGGATGTGGAA...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAACAGAATTTGAGACATaGCGGGCCAATATAAACATT +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTTEFET*RANINI
Trigger: AATGTTTATATTGGCCCGTCATGTCTCAAATTCTGT...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAATCCCATCACCAAACTaGACTGAATCATATAGGATG +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGIPSPN*TESYRM
Trigger: CATCCTATATGATTCAGTTCAGTTTGGTGATGGGAT...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATATCCCATCACCAAACTaGACTGAATCATATAGGATG +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYIPSPN*TESYRM
Trigger: CATCCTATATGATTCAGTTCAGTTTGGTGATGGGAT...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAAATCTGGGTTTGCTaGAGTCTGAAAAGTACATCT +
Preference number: 4 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPQIWVC*SLKSTS
Trigger: AGATGTACTTTTCAGACTTCAGCAAACCCAGATTTG...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTACAAATCTGGGTTTGCTaGAGTCTGAAAAGTACATCT +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLQIWVC*SLKSTS
Trigger: AGATGTACTTTTCAGACTTCAGCAAACCCAGATTTG...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCACAAATCTGGGTTTGCTaGAGTCTGAAAAGTACATCT +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSQIWVC*SLKSTS
Trigger: AGATGTACTTTTCAGACTTCAGCAAACCCAGATTTG...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTAACCTATGTTTAGCTTaGACTGTAGCACATATCCAG +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPNLCLA*TVAHIQ
Trigger: CTGGATATGTGCTACAGTTCAAGCTAAACATAGGTT...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAAAAATTGAACAAGTCTaGTATTCCTGGTGTCCAGAG +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKKIEQV*YSWCPE
Trigger: CTCTGGACACCAGGAATATCAGACTTGTTCAATTTT...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
38% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACATATCCCATTGTCATTTaGATACTGAACAATAAGCCC +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTYPIVI*ILNNKP
Trigger: GGGCTTATTGTTCAGTATTCAAATGACAATGGGATA...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACACAGTCAATATCAACTTaGCCTCCTTGGATTCGATAC +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTQSIST*PPWIRY
Trigger: GTATCGAATCCAAGGAGGTCAAGTTGATATTGACTG...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGGAGATGTTCCAGATTTaGTGGTTTCACCATTCAGAT +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKEMFQI*WFHHSD
Trigger: ATCTGAATGGTGAAACCATCAAATCTGGAACATCTC...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTGAGATGTTCCAGATTTaGTGGTTTCACCATTCAGAT +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIEMFQI*WFHHSD
Trigger: ATCTGAATGGTGAAACCATCAAATCTGGAACATCTC...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAGAGATGTTCCAGATTTaGTGGTTTCACCATTCAGAT +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKEMFQI*WFHHSD
Trigger: ATCTGAATGGTGAAACCATCAAATCTGGAACATCTC...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTTTCAGGTGCCCCCTTTaGAGAATATGGACAATAAAG +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAFRCPL*RIWTIK
Trigger: CTTTATTGTCCATATTCTTCAAAGGGGGCACCTGAA...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTTACTATCAAGGGTTGTaGAATCATCTTCCAAGACCG +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAYYQGL*NHLPRP
Trigger: CGGTCTTGGAAGATGATTTCACAACCCTTGATAGTA...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTACAATCCAAGATCTACTaGGTATTCCAATTCAATCGC +
Preference number: 4 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLQSKIY*VFQFNR
Trigger: GCGATTGAATTGGAATACTCAGTAGATCTTGGATTG...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATCAATCCAAGATCTACTaGGTATTCCAATTCAATCGC +
Preference number: 4 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYQSKIY*VFQFNR
Trigger: GCGATTGAATTGGAATACTCAGTAGATCTTGGATTG...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTCAATCCAAGATCTACTaGGTATTCCAATTCAATCGC +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPQSKIY*VFQFNR
Trigger: GCGATTGAATTGGAATACTCAGTAGATCTTGGATTG...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCCAGTGCTCATTCACTaGAGTTTTGTCTTCCATAAA +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIPVLIH*SFVFHK
Trigger: TTTATGGAAGACAAAACTTCAGTGAATGAGCACTGG...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTCGATACCAGTTGGCTTaGAAATCTATAGAGCCATCA +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTRYQLA*KSIEPS
Trigger: TGATGGCTCTATAGATTTGCAAGCCAACTGGTATCG...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTCAAGATGCCAGTCCTTaGCATTGTTCAGAGAATACT +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTQDASP*HCSENT
Trigger: AGTATTCTCTGAACAATGGCAAGGACTGGCATCTTG...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAATAGACATTATCTATTaGCCATGTCTGCTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSIDIIY*PCLLLV
Trigger: GACAAGCAGCAGACATGGGCAATAGATAATGTCTAT...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGATAGACATTATCTATTaGCCATGTCTGCTGCTTGTC +
Preference number: 4 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWIDIIY*PCLLLV
Trigger: GACAAGCAGCAGACATGGGCAATAGATAATGTCTAT...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTTGGTTCACCCTAGAGTaGAACCTTTCAGTTACACAA +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIWFTLE*NLSVTQ
Trigger: TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCA...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTATGCCTTTCAATGCATaGAGCACTGTGATTAGTCAT +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPMPFNA*STVISH
Trigger: ATGACTAATCACAGTGCTGCATGCATTGAAAGGCAT...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424685.3
ENST00000681034.1
CDS-3UTR CCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTATGAACCTGACCCAATaGAAAATTGGAGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTMNLTQ*KIGGQK
Trigger: CTTCTGTCCTCCAATTTTCCATTGGGTCAGGTTCAT...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTCTTGAATATCTTCTGTaGAAAGATCTACATCCCTGG +
Preference number: 4 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPLEYLL*KDLHPW
Trigger: CCAGGGATGTAGATCTTTCCACAGAAGATATTCAAG...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATTCAGAAATAAACATTaGGAATGTCTGGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEFRNKH*ECLGCH
Trigger: ATGGCATCCCAGACATTCCCAATGTTTATTTCTGAA...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTTCAGAAATAAACATTaGGAATGTCTGGGATGCCAT +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIFRNKH*ECLGCH
Trigger: ATGGCATCCCAGACATTCCCAATGTTTATTTCTGAA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTGACTCCCAGCCATTCTaGTTCTCAAAATCTGACATA +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTDSQPF*FSKSDI
Trigger: TATGTCAGATTTTGAGAACCAGAATGGCTGGGAGTC...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCAGGGTAATCAAAAGCTaGCTTCTCATAAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIRVIKS*LLIKVL
Trigger: CAGAACTTTTATGAGAAGCCAGCTTTTGATTACCCT...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAGGATGCAAGAGACCTTaGAATAACAATGGTGATTCT +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSGCKRP*NNNGDS
Trigger: AGAATCACCATTGTTATTCCAAGGTCTCTTGCATCC...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTAATGGAAATGATCTGTaGTTCCAGGAAGGACATGAA +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSINGNDL*FQEGHE
Trigger: TTCATGTCCTTCCTGGAACCACAGATCATTTCCATT...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAAGAGTGAGATCTCTCTaGGGTACTTTTTGCTATAAA +
Preference number: 4 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTRVRSL*GTFCYK
Trigger: TTTATAGCAAAAAGTACCCCAGAGAGATCTCACTCT...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTACCAATTGTCTTCTCTaGGCCCAAAATCAAATGTAT +
Preference number: 4 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTITNCLL*AQNQMY
Trigger: ATACATTTGATTTTGGGCCCAGAGAAGACAATTGGT...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAACTGTACAATCATCATaGAATAGCCAGTGCTCATTC +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGTVQSS*NSQCSF
Trigger: GAATGAGCACTGGCTATTCCATGATGATTGTACAGT...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAACTGTACAATCATCATaGAATAGCCAGTGCTCATTC +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKTVQSS*NSQCSF
Trigger: GAATGAGCACTGGCTATTCCATGATGATTGTACAGT...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTAAAGTGTCCACCAATTaGCTGGGATTGATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAKVSTN*LGLISA
Trigger: AGCAGAAATCAATCCCAGCCAATTGGTGGACACTTT...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACACTGCATCATGTATCCTaGCTGTATAATGAGTTCTCG +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTLHHVS*LYNEFS
Trigger: CGAGAACTCATTATACAGCCAGGATACATGATGCAG...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAAAAACGACTTGTCTGTaGGCTGAATTGATGATCAAG +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTKTTCL*AELMIK
Trigger: CTTGATCATCAATTCAGCTCACAGACAAGTCGTTTT...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTAAAACGACTTGTCTGTaGGCTGAATTGATGATCAAG +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAKTTCL*AELMIK
Trigger: CTTGATCATCAATTCAGCTCACAGACAAGTCGTTTT...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTTCTGACCATTGCTCTTaGATATCTTCTGTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYISDHCS*ISSVER
Trigger: TCTTTCCACAGAAGATATTCAAGAGCAATGGTCAGA...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTATCCCATCACCAAACTaGACTGAATCATATAGGATG +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAIPSPN*TESYRM
Trigger: CATCCTATATGATTCAGTTCAGTTTGGTGATGGGAT...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAATTCCTATGTTTTCAGTaGATATCAGAGCAGTATCCA +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKFLCFQ*ISEQYP
Trigger: TGGATACTGCTCTGATATTCACTGAAAACATAGGAA...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTGGTTTAGATCCACAGTaGCTAATAATCGACTACAAC +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTGLDPQ*LIIDYN
Trigger: GTTGTAGTCGATTATTAGTCACTGTGGATCTAAACC...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAGAGCCCATGTTGTCGTaGAAAATTCATCATGTAATT +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSEPMLS*KIHHVI
Trigger: AATTACATGATGAATTTTTCACGACAACATGGGCTC...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAATACTGCCACTGTAACTaGTATTACAACAGATCACAA +
Preference number: 4 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKYCHCN*YYNRSQ
Trigger: TTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTA...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAATATTTCAAATTCACTaGGTTTCCTCATGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: IVNTATVTDITTDHNFHGIFQIH*VSSWSQ
Trigger: TTGGGACCATGAGGAAACTCAGTGAATTTGAAATAT...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429186.2
CDS-3UTR GCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAAGTCTCATGAAGAACTaGACAAATCTAGCATGTGAT +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSSLMKN*TNLACD
Trigger: ATCACATGCTAGATTTGTGCAGTTCTTCATGAGACT...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTAGTCTCATGAAGAACTaGACAAATCTAGCATGTGAT +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSISLMKN*TNLACD
Trigger: ATCACATGCTAGATTTGTGCAGTTCTTCATGAGACT...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTGCTGGGATTGATTTCTaGTCCACCAATCAAAATGTT +
Preference number: 4 (lower is better)
Translates to: DITTDHNFHGHINMKTFTAGIDF*STNQNV
Trigger: AACATTTTGATTGGTGGAGCAGAAATCAATCCCAGC...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGTTTCTTCATGGGAAGTaGCTTCATCATCAAAAGTGT +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKFLHGK*LHHQKC
Trigger: ACACTTTTGATGATGAAGGCACTTCCCATGAAGAAA...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTCTTGAATATCTTCTGTaGAAAGATCTACATCCCTGG +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCALEYLL*KDLHPW
Trigger: CCAGGGATGTAGATCTTTCCACAGAAGATATTCAAG...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTAGTTGGATTGATAACTaGGATGATCTGCTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCASWIDN*DDLLLL
Trigger: AAGCAGAAGCAGATCATCCCAGTTATCAATCCAACT...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAAGGGTAATCAAAAGCTaGCTTCTCATAAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSRVIKS*LLIKVL
Trigger: CAGAACTTTTATGAGAAGCCAGCTTTTGATTACCCT...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGAGAGTGAGATCTCTCTaGGGTACTTTTTGCTATAAA +
Preference number: 4 (lower is better)
Translates to: TVTDITTDHNFHGHINMKRVRSL*GTFCYK
Trigger: TTTATAGCAAAAAGTACCCCAGAGAGATCTCACTCT...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTACCAATTGTCTTCTCTaGGCCCAAAATCAAATGTAT +
Preference number: 4 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSITNCLL*AQNQMY
Trigger: ATACATTTGATTTTGGGCCCAGAGAAGACAATTGGT...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTTGGAAAGAATACAGATaGCTGAGAAACACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAWKEYR*LRNTSR
Trigger: TCTGGAAGTGTTTCTCAGCCATCTGTATTCTTTCCA...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATGGAAAGAATACAGATaGCTGAGAAACACTTCCAGA +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTWKEYR*LRNTSR
Trigger: TCTGGAAGTGTTTCTCAGCCATCTGTATTCTTTCCA...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTACAGAATTTGAGACATaGCGGGCCAATATAAACATT +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYITEFET*RANINI
Trigger: AATGTTTATATTGGCCCGTCATGTCTCAAATTCTGT...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATATCCCATTGTCATTTaGATACTGAACAATAAGCCC +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTYPIVI*ILNNKP
Trigger: GGGCTTATTGTTCAGTATTCAAATGACAATGGGATA...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTTATCCCATTGTCATTTaGATACTGAACAATAAGCCC +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAYPIVI*ILNNKP
Trigger: GGGCTTATTGTTCAGTATTCAAATGACAATGGGATA...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR TCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATACTGCCACTGTAACTaGTATTACAACAGATCACAA +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTYCHCN*YYNRSQ
Trigger: TTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTA...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR GCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTTTTCTTCATGGGAAGTaGCTTCATCATCAAAAGTGT +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAFLHGK*LHHQKC
Trigger: ACACTTTTGATGATGAAGGCACTTCCCATGAAGAAA...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAAGGGTAATCAAAAGCTaGCTTCTCATAAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTRVIKS*LLIKVL
Trigger: CAGAACTTTTATGAGAAGCCAGCTTTTGATTACCCT...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTAGGGTAATCAAAAGCTaGCTTCTCATAAAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIRVIKS*LLIKVL
Trigger: CAGAACTTTTATGAGAAGCCAGCTTTTGATTACCCT...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CCA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTAGAGTGAGATCTCTCTaGGGTACTTTTTGCTATAAA +
Preference number: 4 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIRVRSL*GTFCYK
Trigger: TTTATAGCAAAAAGTACCCCAGAGAGATCTCACTCT...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTGACATGCTCCCAATTTaGAAAACAAACATGATTTTG +
Preference number: 4 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCADMLPI*KTNMIL
Trigger: CAAAATCATGTTTGTTTTGCAAATTGGGAGCATGTC...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR GCA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAGACATGCTCCCAATTTaGAAAACAAACATGATTTTG +
Preference number: 4 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTDMLPI*KTNMIL
Trigger: CAAAATCATGTTTGTTTTGCAAATTGGGAGCATGTC...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS GCA 90 bp ACAGCGCTAGGAGGAAAGTCTGCCGGGCCCAGCCACTGCGCTCCATaGCGCCGCCGCCGCCGCCGCCGCCGCGCGCCCTACGCGCCGCTC +
Preference number: 5 (lower is better)
Translates to: TALGGKSAGPSHCAP*RRRRRRRRAPYAPL
Trigger: GAGCGGCGCGTAGGGCGCGCGGCGGCGGCGGCGGCGGCGGCGGCATGGAGCGCAGTGGCTGGGCCCGGCAGACTTTCCTCCTAGCGCTGT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679689.1
ENST00000681034.1
ENST00000681182.1
ENST00000681401.1
CDS GCA 90 bp CGGCTCCCAAAGTTACTTTGGGCCGCGGGAGCGCGGGACCGGGGCTaGGGGCGCCGAGAGCGCGTCGTCTGCCGCCTCCGTGCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: RLPKLLWAAGARDRG*GRRERVVCRLRAPP
Trigger: CGGCGGCGCACGGAGGCGGCAGACGACGCGCTCTCGGCGCCCGCAGCCCCGGTCCCGCGCTCCCGCGGCCCAAAGTAACTTTGGGAGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000428762.6
ENST00000681401.1
CDS GCA 90 bp CGCGCCCTCAGCGTCGCCCCCAGCAACAGCGCTAGGAGGAAAGTCTaGCGGGCCCAGCCACTGCGCTCCATGCCGCCGCCGCCGCCGCCG +
Preference number: 5 (lower is better)
Translates to: RALSVAPSNSARRKV*RAQPLRSMPPPPPP
Trigger: CGGCGGCGGCGGCGGCGGCATGGAGCGCAGTGGCTGGGCCCGGCAGACTTTCCTCCTAGCGCTGTTGCTGGGGGCGACGCTGAGGGCGCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679689.1
ENST00000681034.1
ENST00000681182.1
ENST00000681401.1
CDS CCA 90 bp GCCGCCGCCGCCGCGCGCCCTACGCGCCGCTCGCTCATTCAGTTTTaGAGACGCCGGGACGGAGGAGCCACGCGGAGAGAAGGCGAGAAG +
Preference number: 5 (lower is better)
Translates to: AAAAARPTRRSLIQF*RRRDGGATRREGEK
Trigger: CTTCTCGCCTTCTCTCCGCGTGGCTCCTCCGTCCCGGCGTCTCCAAAACTGAATGAGCGAGCGGCGCGTAGGGCGCGCGGCGGCGGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679689.1
ENST00000681034.1
ENST00000681182.1
ENST00000681401.1
CDS CCA 90 bp CCCGACAGGGCCGGCATCTGCAGGGGAGCGCTCATGCTGGGGTACTaGGGCGCTGCTGAAGGTGTCCAGCATAACGGTCCTTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: PDRAGICRGALMLGY*GAAEGVQHNGPLVS
Trigger: GCTGACCAAAGGACCGTTATGCTGGACACCTTCAGCAGCGCCCCAGTACCCCAGCATGAGCGCTCCCCTGCAGATGCCGGCCCTGTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS CCA 90 bp GCGATCCTCCCGACAGGGCCGGCATCTGCAGGGGAGCGCTCATGCTaGGGTACTGGGGCGCTGCTGAAGGTGTCCAGCATAACGGTCCTT +
Preference number: 5 (lower is better)
Translates to: AILPTGPASAGERSC*GTGALLKVSSITVL
Trigger: AAGGACCGTTATGCTGGACACCTTCAGCAGCGCCCCAGTACCCCAGCATGAGCGCTCCCCTGCAGATGCCGGCCCTGTCGGGAGGATCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS CCA 90 bp AAACAGAGCAGTCATCACCTTGGAAGCTCTCGTCGCAGATGCAGATaGCACCGGTCGTGCAGTATCCGTGCCCGCTGCAGAGCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: KQSSHHLGSSRRRCR*HRSCSIRARCRAWG
Trigger: GCCCCAAGCTCTGCAGCGGGCACGGATACTGCACGACCGGTGCCATCTGCATCTGCGACGAGAGCTTCCAAGGTGATGACTGCTCTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CCA 90 bp CCGTTGTTGACGCTGTATTGCAGCAGCACTGCCTTGTCCACAGCGTaGGGGCCACTCAGGTCACTGTTGCAGCTGTCCGTCTGCGACATG +
Preference number: 5 (lower is better)
Translates to: PLLTLYCSSTALSTA*GPLRSLLQLSVCDM
Trigger: CATGTCGCAGACGGACAGCTGCAACAGTGACCTGAGTGGCCCCCACGCTGTGGACAAGGCAGTGCTGCTGCAATACAGCGTCAACAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473945.1
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 90 bp GACATGCCAGGTGATCCCGTTGTTGACGCTGTATTGCAGCAGCACTaGCTTGTCCACAGCGTGGGGGCCACTCAGGTCACTGTTGCAGCT +
Preference number: 5 (lower is better)
Translates to: DMPGDPVVDAVLQQH*LVHSVGATQVTVAA
Trigger: AGCTGCAACAGTGACCTGAGTGGCCCCCACGCTGTGGACAAGGCAGTGCTGCTGCAATACAGCGTCAACAACGGGATCACCTGGCATGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473945.1
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS TCA 90 bp CAGAATGATGATGTCATCGACTGCCCACTGGTCATAGTCCTCCCCTaGGAACACGGGCTGCCACCAGCGGAACCTGGTGCAAGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: QNDDVIDCPLVIVLP*EHGLPPAEPGARGL
Trigger: AAGACCCCTTGCACCAGGTTCCGCTGGTGGCAGCCCGTGTTCTCAGGGGAGGACTATGACCAGTGGGCAGTCGATGACATCATCATTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 90 bp TCAGCAGAGCCTGAGATGAGGACATTGTCAATGGCCCAGTCGTTCTaGTCCAGGCCGTCATGTCTTGGCTGCCACCAGCGGAAGCGAGTG +
Preference number: 5 (lower is better)
Translates to: SAEPEMRTLSMAQSF*SRPSCLGCHQRKRV
Trigger: CACTCGCTTCCGCTGGTGGCAGCCAAGACATGACGGCCTGGATCAGAACGACTGGGCCATTGACAATGTCCTCATCTCAGGCTCTGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS CCA 90 bp TGGGGTACTGGGGCGCTGCTGAAGGTGTCCAGCATAACGGTCCTTTaGTCAGCAGAGCCTGAGATGAGGACATTGTCAATGGCCCAGTCG +
Preference number: 5 (lower is better)
Translates to: WGTGALLKVSSITVL*SAEPEMRTLSMAQS
Trigger: CGACTGGGCCATTGACAATGTCCTCATCTCAGGCTCTGCTGACCAAAGGACCGTTATGCTGGACACCTTCAGCAGCGCCCCAGTACCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS CCA 90 bp AGCAGCAGCGCACACAGGAGGCTAGTGTGGGGACCAGGTTGCTCTTaGATTTGGGGGTTGATATGGATGCCATGCAAGCAGGTGCCTCAG +
Preference number: 5 (lower is better)
Translates to: SSSAHRRLVWGPGCS*IWGLIWMPCKQVPQ
Trigger: CTGAGGCACCTGCTTGCATGGCATCCATATCAACCCCCAAATCCAAGAGCAACCTGGTCCCCACACTAGCCTCCTGTGTGCGCTGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS TCA 90 bp CTCCACGAGAGGCCACCGTTGAGAGAATACTGTAGGAGCACGGGTTaGCTCCTGGGGTCAGGAACGCCTTTACCACATCCCAGTCTCATG +
Preference number: 5 (lower is better)
Translates to: LHERPPLREYCRSTG*LLGSGTPLPHPSLM
Trigger: CATGAGACTGGGATGTGGTAAAGGCGTTCCTGACCCCAGGAGTCAACCCGTGCTCCTACAGTATTCTCTCAACGGTGGCCTCTCGTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681315.1
CDS GCA 90 bp GGATGCCCCCATTGTTGCTGTACTGAAGGAGGACGCCCTCCTCTCTaGTGTCAGGCTTGTTGCATGAAGCACTCTCTCCGCCTATCTGGA +
Preference number: 5 (lower is better)
Translates to: GCPHCCCTEGGRPPL*CQACCMKHSLRLSG
Trigger: TCCAGATAGGCGGAGAGAGTGCTTCATGCAACAAGCCTGACAGCAGAGAGGAGGGCGTCCTCCTTCAGTACAGCAACAATGGGGGCATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CCA 90 bp GCAGCCGCAAGCCCTCTGCATTTGGCTTGGGAACAGAACATGGGCTaGATTTCAGCTTCCCACTTGCTCCCTGGTATAAGGAGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: AAASPLHLAWEQNMG*ISASHLLPGIRRER
Trigger: CCTCTCCCTCCTTATACCAGGGAGCAAGTGGGAAGCTGAAATCCAGCCCATGTTCTGTTCCCAAGCCAAATGCAGAGGGCTTGCGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679952.1
CDS TCA 90 bp ATCTCTGCTAGCAGGTGCCACTGGATGCCCCCATTGTTGCTGTACTaGAGGAGGACGCCCTCCTCTCTGCTGTCAGGCTTGTTGCATGAA +
Preference number: 5 (lower is better)
Translates to: ISASRCHWMPPLLLY*RRTPSSLLSGLLHE
Trigger: TTCATGCAACAAGCCTGACAGCAGAGAGGAGGGCGTCCTCCTTCAGTACAGCAACAATGGGGGCATCCAGTGGCACCTGCTAGCAGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 90 bp GCTGCTGAAGGTGTCCAGCATAACGGTCCTTTGGTCAGCAGAGCCTaGGATGAGGACATTGTCAATGGCCCAGTCGTTCTGATCCAGGCC +
Preference number: 5 (lower is better)
Translates to: AAEGVQHNGPLVSRA*DEDIVNGPVVLIQA
Trigger: GGCCTGGATCAGAACGACTGGGCCATTGACAATGTCCTCATCTCAGGCTCTGCTGACCAAAGGACCGTTATGCTGGACACCTTCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS CCA 90 bp AGGTGCCAGGTAAGGCCGTGGTTGGTTGAGTACTCCAGCTTCACCTaGTTGTCCATGTGTGGGGTGTATTTCTGGCCACATCCCATCACC +
Preference number: 5 (lower is better)
Translates to: RCQVRPWLVEYSSFT*LSMCGVYFWPHPIT
Trigger: GGTGATGGGATGTGGCCAGAAATACACCCCACACATGGACAACCAGGTGAAGCTGGAGTACTCAACCAACCACGGCCTTACCTGGCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CCA 90 bp GACATTGTCAATGGCCCAGTCGTTCTGATCCAGGCCGTCATGTCTTaGCTGCCACCAGCGGAAGCGAGTGGCAATCTCTTTAGCATCAGG +
Preference number: 5 (lower is better)
Translates to: DIVNGPVVLIQAVMS*LPPAEASGNLFSIR
Trigger: CCTGATGCTAAAGAGATTGCCACTCGCTTCCGCTGGTGGCAGCCAAGACATGACGGCCTGGATCAGAACGACTGGGCCATTGACAATGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS CCA 90 bp CCCAGCAAGTTGTCCAAAAGCAGCAGCGCACACAGGAGGCTAGTGTaGGGACCAGGTTGCTCTTGGATTTGGGGGTTGATATGGATGCCA +
Preference number: 5 (lower is better)
Translates to: PSKLSKSSSAHRRLV*GPGCSWIWGLIWMP
Trigger: TGGCATCCATATCAACCCCCAAATCCAAGAGCAACCTGGTCCCCACACTAGCCTCCTGTGTGCGCTGCTGCTTTTGGACAACTTGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS TCA 90 bp GTGGGAGTCAGGTCATGGGTCACTGCATACACCTCCCGTCCATCATaGCTGCCACAGAGCATCACACCATCAGGGGAGTCACAGAATCTT +
Preference number: 5 (lower is better)
Translates to: VGVRSWVTAYTSRPS*LPQSITPSGESQNL
Trigger: AAGATTCTGTGACTCCCCTGATGGTGTGATGCTCTGTGGCAGTCATGATGGACGGGAGGTGTATGCAGTGACCCATGACCTGACTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 90 bp AGCCATGCCCACTGCACATGTTGGGGCACTGCTGCCCAATGTAAATaGTGTCCAAAGCCCACTCGTCTTGAGCTGTGTAATAGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: SHAHCTCWGTAAQCK*CPKPTRLELCNSSG
Trigger: GCCAGAGCTATTACACAGCTCAAGACGAGTGGGCTTTGGACAGCATTTACATTGGGCAGCAGTGCCCCAACATGTGCAGTGGGCATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 90 bp CCTGGTCACACCTGCATATGCCATGATCGCATGAGCCATGCCCACTaGACATGTTGGGGCACTGCTGCCCAATGTAAATGCTGTCCAAAG +
Preference number: 5 (lower is better)
Translates to: PGHTCICHDRMSHAH*TCWGTAAQCKCCPK
Trigger: CTTTGGACAGCATTTACATTGGGCAGCAGTGCCCCAACATGTGCAGTGGGCATGGCTCATGCGATCATGGCATATGCAGGTGTGACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 90 bp AAAAGTACATCTCTGCTAGCAGGTGCCACTGGATGCCCCCATTGTTaGTGTACTGAAGGAGGACGCCCTCCTCTCTGCTGTCAGGCTTGT +
Preference number: 5 (lower is better)
Translates to: KSTSLLAGATGCPHC*CTEGGRPPLCCQAC
Trigger: ACAAGCCTGACAGCAGAGAGGAGGGCGTCCTCCTTCAGTACAGCAACAATGGGGGCATCCAGTGGCACCTGCTAGCAGAGATGTACTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 90 bp CGCTCCACCCCAGAGACCACAATTCCATTGCTGATCACAAAAGGCTaGCACCAGCGAAGTCGAGTTGTGTTGGTGAGGGCATCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: RSTPETTIPLLITKG*HQRSRVVLVRASSG
Trigger: TCCTGAAGATGCCCTCACCAACACAACTCGACTTCGCTGGTGGCAGCCTTTTGTGATCAGCAATGGAATTGTGGTCTCTGGGGTGGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 90 bp TTCCTAGAACATAGCCAGCCTCTTCCCACCTGTGGCCTTTGCACCTaGTGTTCTTTCCTTTGGGTATGCTGTGCCCCACCATCCACAGAC +
Preference number: 5 (lower is better)
Translates to: FLEHSQPLPTCGLCT*CSFLWVCCAPPSTD
Trigger: GTCTGTGGATGGTGGGGCACAGCATACCCAAAGGAAAGAACAGCAGGTGCAAAGGCCACAGGTGGGAAGAGGCTGGCTATGTTCTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS CCA 90 bp ACCTGCATATGCCATGATCGCATGAGCCATGCCCACTGCACATGTTaGGGCACTGCTGCCCAATGTAAATGCTGTCCAAAGCCCACTCGT +
Preference number: 5 (lower is better)
Translates to: TCICHDRMSHAHCTC*GTAAQCKCCPKPTR
Trigger: ACGAGTGGGCTTTGGACAGCATTTACATTGGGCAGCAGTGCCCCAACATGTGCAGTGGGCATGGCTCATGCGATCATGGCATATGCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS-3UTR CAA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCCCACTCAGGTCACTGTaGCAGCTGTCCGTCTGCGAC +
Preference number: 5 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITPLRSL*QLSVCD
Trigger: GTCGCAGACGGACAGCTGCAACAGTGACCTGAGTGG...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS TCA 90 bp GTACTGAAGGAGGACGCCCTCCTCTCTGCTGTCAGGCTTGTTGCATaGAGCACTCTCTCCGCCTATCTGGATGTAGAACTGGACAAAGTC +
Preference number: 5 (lower is better)
Translates to: VLKEDALLSAVRLVA*STLSAYLDVELDKV
Trigger: GACTTTGTCCAGTTCTACATCCAGATAGGCGGAGAGAGTGCTTCATGCAACAAGCCTGACAGCAGAGAGGAGGGCGTCCTCCTTCAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 90 bp GGTTCCTTGTGCAGCAGTATATCCCAGGTCACAGAAACACACTCCTaGAATGCAGTCCCCATGGCCACTGCAGTAACTGGGACAAGGCTC +
Preference number: 5 (lower is better)
Translates to: GSLCSSISQVTETHS*NAVPMATAVTGTRL
Trigger: GAGCCTTGTCCCAGTTACTGCAGTGGCCATGGGGACTGCATTTCAGGAGTGTGTTTCTGTGACCTGGGATATACTGCTGCACAAGGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 90 bp TGTGGGTCAAGTAGCAGTTTGGCCCTGAGTATCCCGGATCACAGATaGACTGTTCCCTTAAGCAATCTCCATGGCCCCTGCAGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: CGSSSSLALSIPDHR*TVPLSNLHGPCSCP
Trigger: TGGACAACTGCAGGGGCCATGGAGATTGCTTAAGGGAACAGTGCATCTGTGATCCGGGATACTCAGGGCCAAACTGCTACTTGACCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 90 bp TTTCAGTTCCTAGAACATAGCCAGCCTCTTCCCACCTGTGGCCTTTaGACCTGCTGTTCTTTCCTTTGGGTATGCTGTGCCCCACCATCC +
Preference number: 5 (lower is better)
Translates to: FQFLEHSQPLPTCGL*TCCSFLWVCCAPPS
Trigger: GGATGGTGGGGCACAGCATACCCAAAGGAAAGAACAGCAGGTGCAAAGGCCACAGGTGGGAAGAGGCTGGCTATGTTCTAGGAACTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS CCA 90 bp CAGGGCATCACCAGTAGAGCCACACACGGGCATCTTGGTGCCTCCTaGGTGAAGCAGCCATTTCCTACTATCAAGGGTTGTGAAATCATC +
Preference number: 5 (lower is better)
Translates to: QGITSRATHGHLGAS*VKQPFPTIKGCEII
Trigger: GATGATTTCACAACCCTTGATAGTAGGAAATGGCTGCTTCACCCAGGAGGCACCAAGATGCCCGTGTGTGGCTCTACTGGTGATGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681315.1
ENST00000681364.1
CDS CCA 90 bp GTTCTGACTGGATGGAGCTCGATTGAAGTTGTCTTTGAGTTGGGTTaGAAGAGAGGTCTCGGGGTCATCACAGTACAGGCCACCCCACTG +
Preference number: 5 (lower is better)
Translates to: VLTGWSSIEVVFELG*KRGLGVITVQATPL
Trigger: CAGTGGGGTGGCCTGTACTGTGATGACCCCGAGACCTCTCTTCCAACCCAACTCAAAGACAACTTCAATCGAGCTCCATCCAGTCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000679952.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS-3UTR CAA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAACCAGGCCGTCATGTCTaGGCTGCCACCAGCGGAAGC +
Preference number: 5 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQPGRHV*AATSGS
Trigger: GCTTCCGCTGGTGGCAGCCAAGACATGACGGCCTGG...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAACCATGGCCCCTGCAGTaGTCCAAGCATCCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQPWPLQ*SKHPGP
Trigger: GGGCCCTGGATGCTTGGACAACTGCAGGGGCCATGG...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS TCA 90 bp AAGGCATTCTTCTTGGACGAGGTGCCAGGTAAGGCCGTGGTTGGTTaGGTACTCCAGCTTCACCTGGTTGTCCATGTGTGGGGTGTATTT +
Preference number: 5 (lower is better)
Translates to: KAFFLDEVPGKAVVG*VLQLHLVVHVWGVF
Trigger: AAATACACCCCACACATGGACAACCAGGTGAAGCTGGAGTACTCAACCAACCACGGCCTTACCTGGCACCTCGTCCAAGAAGAATGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 90 bp GCATCACCAGTAGAGCCACACACGGGCATCTTGGTGCCTCCTGGGTaGAGCAGCCATTTCCTACTATCAAGGGTTGTGAAATCATCTTCC +
Preference number: 5 (lower is better)
Translates to: ASPVEPHTGILVPPG*SSHFLLSRVVKSSS
Trigger: GGAAGATGATTTCACAACCCTTGATAGTAGGAAATGGCTGCTTCACCCAGGAGGCACCAAGATGCCCGTGTGTGGCTCTACTGGTGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681315.1
ENST00000681364.1
CDS TCA 90 bp CCTAAAATAGGAGCCTGGAAAGCTCCGGTACCTCAGGCAGCATTCTaGCTCTCTCTCTCTCCTCCTCTCTCTGCTCATGATTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: PKIGAWKAPVPQAAF*LSLSPPLSAHDSSE
Trigger: CTCAGAGGAATCATGAGCAGAGAGAGGAGGAGAGAGAGAGAGTCAGAATGCTGCCTGAGGTACCGGAGCTTTCCAGGCTCCTATTTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS TCA 90 bp TCATCTTGGGCAAGCAGTGACAATGCAGCATCAACACTGTTGCTCTaGCATCAGCCAATGACTCATCTGGGCAGGGCTACTGCTGGGACT +
Preference number: 5 (lower is better)
Translates to: SSWASSDNAASTLLL*HQPMTHLGRATAGT
Trigger: AGTCCCAGCAGTAGCCCTGCCCAGATGAGTCATTGGCTGATGTCAGAGCAACAGTGTTGATGCTGCATTGTCACTGCTTGCCCAAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS GCA 90 bp ACATGGTGGGCTCACTTAGTTCTCTGGAGTTTCCTTCGCATCCTTTaGCTGCAGAAGCCGGGTAACAGCCTTCTTTCACCAGAAACCAGG +
Preference number: 5 (lower is better)
Translates to: TWWAHLVLWSFLRIL*LQKPGNSLLSPETR
Trigger: CCTGGTTTCTGGTGAAAGAAGGCTGTTACCCGGCTTCTGCAGGCAAAGGATGCGAAGGAAACTCCAGAGAACTAAGTGAGCCCACCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 90 bp CTTGTGCAGCAGTATATCCCAGGTCACAGAAACACACTCCTGAAATaGAGTCCCCATGGCCACTGCAGTAACTGGGACAAGGCTCGGATA +
Preference number: 5 (lower is better)
Translates to: LVQQYIPGHRNTLLK*SPHGHCSNWDKARI
Trigger: TATCCGAGCCTTGTCCCAGTTACTGCAGTGGCCATGGGGACTGCATTTCAGGAGTGTGTTTCTGTGACCTGGGATATACTGCTGCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 90 bp GAGTCAGGTCATGGGTCACTGCATACACCTCCCGTCCATCATGACTaGCACAGAGCATCACACCATCAGGGGAGTCACAGAATCTTTCTA +
Preference number: 5 (lower is better)
Translates to: ESGHGSLHTPPVHHD*HRASHHQGSHRIFL
Trigger: TAGAAAGATTCTGTGACTCCCCTGATGGTGTGATGCTCTGTGGCAGTCATGATGGACGGGAGGTGTATGCAGTGACCCATGACCTGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 90 bp CCGGATCACAGATGCACTGTTCCCTTAAGCAATCTCCATGGCCCCTaGAGTTGTCCAAGCATCCAGGGCCCAGGTAGAAATTATCGATTG +
Preference number: 5 (lower is better)
Translates to: PDHRCTVPLSNLHGP*SCPSIQGPGRNYRL
Trigger: CAATCGATAATTTCTACCTGGGCCCTGGATGCTTGGACAACTGCAGGGGCCATGGAGATTGCTTAAGGGAACAGTGCATCTGTGATCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 90 bp GGCAGATGGGACGATGGCAAGAGGTCATGTTGTTCTCACTACCGATaGGCCCCCAGTATTGCAGGAACTTTGCACCTCGAAGATCCAAAT +
Preference number: 5 (lower is better)
Translates to: GRWDDGKRSCCSHYR*APSIAGTLHLEDPN
Trigger: ATTTGGATCTTCGAGGTGCAAAGTTCCTGCAATACTGGGGGCGCATCGGTAGTGAGAACAACATGACCTCTTGCCATCGTCCCATCTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 90 bp CTCACTGGACGTAAGTACGGAAGCATCCTGCCCCAGTTCTCTGGCTaGCATCTCATGTTCAATAGCAAAACCAGCCTGAGAGAGCTGAGT +
Preference number: 5 (lower is better)
Translates to: LTGRKYGSILPQFSG*HLMFNSKTSLRELS
Trigger: ACTCAGCTCTCTCAGGCTGGTTTTGCTATTGAACATGAGATGGCAGCCAGAGAACTGGGGCAGGATGCTTCCGTACTTACGTCCAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681921.1
CDS CCA 90 bp CTTCAAAGTCCCCTGTGTGATACATGGTGGGCTCACTTAGTTCTCTaGAGTTTCCTTCGCATCCTTTGCCTGCAGAAGCCGGGTAACAGC +
Preference number: 5 (lower is better)
Translates to: LQSPLCDTWWAHLVL*SFLRILCLQKPGNS
Trigger: GCTGTTACCCGGCTTCTGCAGGCAAAGGATGCGAAGGAAACTCCAGAGAACTAAGTGAGCCCACCATGTATCACACAGGGGACTTTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CCA 90 bp TCTTCGGTGACAAGATGCCAGTCCTTGCCATTGTTCAGAGAATACTaGAGCTGTACACTGTGGGAGTTGCTGAAGGGCTTGCTACAGCCC +
Preference number: 5 (lower is better)
Translates to: SSVTRCQSLPLFREY*SCTLWELLKGLLQP
Trigger: GGGCTGTAGCAAGCCCTTCAGCAACTCCCACAGTGTACAGCTCCAGTATTCTCTGAACAATGGCAAGGACTGGCATCTTGTCACCGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CCA 90 bp TCAGAAAAGATGACTATCTCCGAGCAGCCGCAAGCCCTCTGCATTTaGCTTGGGAACAGAACATGGGCTGGATTTCAGCTTCCCACTTGC +
Preference number: 5 (lower is better)
Translates to: SEKMTISEQPQALCI*LGNRTWAGFQLPTC
Trigger: GCAAGTGGGAAGCTGAAATCCAGCCCATGTTCTGTTCCCAAGCCAAATGCAGAGGGCTTGCGGCTGCTCGGAGATAGTCATCTTTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679952.1
CDS-3UTR CAA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCCGCCGCCCATCTTTGTaGAAAACCAGGGCCTTACCA +
Preference number: 5 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSRRPSL*KTRALP
Trigger: TGGTAAGGCCCTGGTTTTCAACAAAGATGGGCGGCG...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCCAGGTAAGGCCGTGGTaGGTTGAGTACTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITQVRPW*VEYSSF
Trigger: GAAGCTGGAGTACTCAACCAACCACGGCCTTACCTG...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCCTTCCCATGTTGCGGTaGCCACCATCGAAATGCCGT +
Preference number: 5 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITLPMLR*PPSKCR
Trigger: ACGGCATTTCGATGGTGGCAACCGCAACATGGGAAG...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTCCAGGCCGTCATGTCTaGGCTGCCACCAGCGGAAGC +
Preference number: 5 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSPGRHV*AATSGS
Trigger: GCTTCCGCTGGTGGCAGCCAAGACATGACGGCCTGG...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTACCAGGCCGTCATGTCTaGGCTGCCACCAGCGGAAGC +
Preference number: 5 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVPGRHV*AATSGS
Trigger: GCTTCCGCTGGTGGCAGCCAAGACATGACGGCCTGG...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCCCATGGCCCCTGCAGTaGTCCAAGCATCCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSPWPLQ*SKHPGP
Trigger: GGGCCCTGGATGCTTGGACAACTGCAGGGGCCATGG...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGGGGTCAAGTAGCAGTTaGGCCCTGAGTATCCCGGAT +
Preference number: 5 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKGSSSS*ALSIPD
Trigger: ATCCGGGATACTCAGGGCCAAACTGCTACTTGACCC...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCGTGAGATCCAGAGGCTaGGTAGCTGCTTGCCTGATC +
Preference number: 5 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSVRSRG*VAACLI
Trigger: GATCAGGCAAGCAGCTACCAAGCCTCTGGATCTCAC...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACTGCAGCAGCACTGCCTaGTCCACAGCGTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYCSSTA*STAWGP
Trigger: TGGCCCCCACGCTGTGGACAAGGCAGTGCTGCTGCA...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCCAGGTGATCCCGTTGTaGACGCTGTATTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITQVIPL*TLYCSS
Trigger: GCTGCTGCAATACAGCGTCAACAACGGGATCACCTG...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS TCA 90 bp AGCCAGTTCCAACCTGGGCACCTGTTATCTTGTACCACAGAGGGCTaGGCTTCCCCTCAAACCTATCGAACATCTCATTGTGATTGGGGA +
Preference number: 5 (lower is better)
Translates to: SQFQPGHLLSCTTEG*ASPQTYRTSHCDWG
Trigger: TCCCCAATCACAATGAGATGTTCGATAGGTTTGAGGGGAAGCTCAGCCCTCTGTGGTACAAGATAACAGGTGCCCAGGTTGGAACTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 90 bp GGTTTCCTTAAGCTGTGGGCTGTGGACCTCATCTTGGGCAAGCAGTaGCAATGCAGCATCAACACTGTTGCTCTGACATCAGCCAATGAC +
Preference number: 5 (lower is better)
Translates to: GFLKLWAVDLILGKQ*QCSINTVALTSAND
Trigger: GTCATTGGCTGATGTCAGAGCAACAGTGTTGATGCTGCATTGTCACTGCTTGCCCAAGATGAGGTCCACAGCCCACAGCTTAAGGAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS GCA 90 bp CCAGGTCACAGAAACACACTCCTGAAATGCAGTCCCCATGGCCACTaGAGTAACTGGGACAAGGCTCGGATATGTACACTCCATCTAAAC +
Preference number: 5 (lower is better)
Translates to: PGHRNTLLKCSPHGH*SNWDKARICTLHLN
Trigger: GTTTAGATGGAGTGTACATATCCGAGCCTTGTCCCAGTTACTGCAGTGGCCATGGGGACTGCATTTCAGGAGTGTGTTTCTGTGACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 90 bp TTGGCTGGGATTGATTTCTGCTCCACCAATCAAAATGTTGTCCAGTaGCCACTGAGCACGCTCCACCCCAGAGACCACAATTCCATTGCT +
Preference number: 5 (lower is better)
Translates to: LAGIDFCSTNQNVVQ*PLSTLHPRDHNSIA
Trigger: AGCAATGGAATTGTGGTCTCTGGGGTGGAGCGTGCTCAGTGGGCACTGGACAACATTTTGATTGGTGGAGCAGAAATCAATCCCAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 90 bp GAGGAGGTAAGTATGGAAGGGGGCCCTAAAAGATGGCAGAGGATTTaGCCCAGAGACCGAGCCAGAAAGAATTCCAAGGGACACAAACAA +
Preference number: 5 (lower is better)
Translates to: EEVSMEGGPKRWQRI*PRDRARKNSKGHKQ
Trigger: TTGTTTGTGTCCCTTGGAATTCTTTCTGGCTCGGTCTCTGGGGCAAATCCTCTGCCATCTTTTAGGGCCCCCTTCCATACTTACCTCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS CCA 90 bp TGCAGGTGTCTTCGCGTCCTGTGGCAGGTCAATGGAAATGATCTGTaGTTCCAGGAAGGACATGAAGTCCAACTCTCGAAGCAAATGCCA +
Preference number: 5 (lower is better)
Translates to: CRCLRVLWQVNGNDL*FQEGHEVQLSKQMP
Trigger: TGGCATTTGCTTCGAGAGTTGGACTTCATGTCCTTCCTGGAACCACAGATCATTTCCATTGACCTGCCACAGGACGCGAAGACACCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS-3UTR CAA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGATCTGTTGGAGCTCCTaGTTCACACAACTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKICWSS*FTQLLG
Trigger: GCCCAGCAGTTGTGTGAACAAGGAGCTCCAACAGAT...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCAGCTTCACCTGGTaGTCCATGTGTGGGGTGTAT +
Preference number: 5 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKSSFTW*SMCGVY
Trigger: ATACACCCCACACATGGACAACCAGGTGAAGCTGGA...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCTGGAAGGCATTCTTCTaGGACGAGGTGCCAGGTAAG +
Preference number: 5 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSWKAFF*DEVPGK
Trigger: CTTACCTGGCACCTCGTCCAAGAAGAATGCCTTCCA...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTGGCAAGAGGTCATGTaGTTCTCACTACCGATGCGC +
Preference number: 5 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKWQEVM*FSLPMR
Trigger: GCGCATCGGTAGTGAGAACAACATGACCTCTTGCCA...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAGGCTTGGTAGCTGCTaGCCTGATCTGACAGCCATT +
Preference number: 5 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITRLGSC*PDLTAI
Trigger: AATGGCTGTCAGATCAGGCAAGCAGCTACCAAGCCT...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGCCACTCAGGTCACTGTaGCAGCTGTCCGTCTGCGAC +
Preference number: 5 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRPLRSL*QLSVCD
Trigger: GTCGCAGACGGACAGCTGCAACAGTGACCTGAGTGG...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS TCA 90 bp TGGAGAAACCTGGATTGTGAGCTGTCAAGGAAAGATGTAATTAGCTaGCGCCGCCCATCTTTGTTGAAAACCAGGGCCTTACCACTGGCC +
Preference number: 5 (lower is better)
Translates to: WRNLDCELSRKDVIS*RRPSLLKTRALPLA
Trigger: GGCCAGTGGTAAGGCCCTGGTTTTCAACAAAGATGGGCGGCGTCAGCTAATTACATCTTTCCTTGACAGCTCACAATCCAGGTTTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
CDS TCA 90 bp CCGTGTAATGCAGACAGCCAATGGTTGGAGGAACACACTCTTCGGTaGCAAGATGCCAGTCCTTGCCATTGTTCAGAGAATACTGGAGCT +
Preference number: 5 (lower is better)
Translates to: PCNADSQWLEEHTLR*QDASPCHCSENTGA
Trigger: AGCTCCAGTATTCTCTGAACAATGGCAAGGACTGGCATCTTGTCACCGAAGAGTGTGTTCCTCCAACCATTGGCTGTCTGCATTACACGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 90 bp AGGTTGGACCTGAGTAGCCAGGGTCACATATACATTTGGTTCCATTaGTACAGCTCCCCTGTCCATTACACATCTCCTCACACTGGGGAC +
Preference number: 5 (lower is better)
Translates to: RLDLSSQGHIYIWFH*YSSPVHYTSPHTGD
Trigger: GTCCCCAGTGTGAGGAGATGTGTAATGGACAGGGGAGCTGTATCAATGGAACCAAATGTATATGTGACCCTGGCTACTCAGGTCCAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681199.1
CDS TCA 90 bp GCAATGTACCTGCCCACATTGCTGGAATTGCTGAAAAGGAACTCCTaGAGAAGACTCCACGAGAGGCCACCGTTGAGAGAATACTGTAGG +
Preference number: 5 (lower is better)
Translates to: AMYLPTLLELLKRNS*RRLHERPPLREYCR
Trigger: CCTACAGTATTCTCTCAACGGTGGCCTCTCGTGGAGTCTTCTTCAGGAGTTCCTTTTCAGCAATTCCAGCAATGTGGGCAGGTACATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681315.1
CDS TCA 90 bp GGATTGATTTCTGCTCCACCAATCAAAATGTTGTCCAGTGCCCACTaGGCACGCTCCACCCCAGAGACCACAATTCCATTGCTGATCACA +
Preference number: 5 (lower is better)
Translates to: GLISAPPIKMLSSAH*ARSTPETTIPLLIT
Trigger: TGTGATCAGCAATGGAATTGTGGTCTCTGGGGTGGAGCGTGCTCAGTGGGCACTGGACAACATTTTGATTGGTGGAGCAGAAATCAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS TCA 90 bp CATCCTCTAGTGAGGCATAAGTCTGAGGTCCCCCTCAGTCTCCCGTaGCTGATTGCTGGTAGCAATCTCTGCTCGATGTACTCGTTATTA +
Preference number: 5 (lower is better)
Translates to: HPLVRHKSEVPLSLP*LIAGSNLCSMYSLL
Trigger: TAATAACGAGTACATCGAGCAGAGATTGCTACCAGCAATCAGTCACGGGAGACTGAGGGGGACCTCAGACTTATGCCTCACTAGAGGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478148.2
CDS TCA 90 bp GGCTCAAATCCGAAAGCACTGGAACCTCCAATGCTCTGTGATGCCTaGACACTTGTAGATGTGTATAGTCCTGTCACCAGCAAGCCGTCA +
Preference number: 5 (lower is better)
Translates to: GSNPKALEPPMLCDA*TLVDVYSPVTSKPS
Trigger: TGACGGCTTGCTGGTGACAGGACTATACACATCTACAAGTGTTCAGGCATCACAGAGCATTGGAGGTTCCAGTGCTTTCGGATTTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS TCA 90 bp TGGGCTCTGCCCAAGCTCAAAAGTGTCTTTGGACCATTAAACCAATaGTACAGGGTTGCCTGTGAGAGGAAGGCTAGGTGCAATTCAGGC +
Preference number: 5 (lower is better)
Translates to: WALPKLKSVFGPLNQ*YRVACERKARCNSG
Trigger: GCCTGAATTGCACCTAGCCTTCCTCTCACAGGCAACCCTGTATCATTGGTTTAATGGTCCAAAGACACTTTTGAGCTTGGGCAGAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS GCA 90 bp AGTTCTCGTGGGCCATATGGTTCACAGAAGGTGACGGCATTGCCATaGATAATCGCGCCACACTGTTCTCCAGTCTCACAGTTGTTACAT +
Preference number: 5 (lower is better)
Translates to: SSRGPYGSQKVTALP*IIAPHCSPVSQLLH
Trigger: ATGTAACAACTGTGAGACTGGAGAACAGTGTGGCGCGATTATGCATGGCAATGCCGTCACCTTCTGTGAACCATATGGCCCACGAGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681931.1
CDS GCA 90 bp TGCAGACAGCCAATGGTTGGAGGAACACACTCTTCGGTGACAAGATaGCAGTCCTTGCCATTGTTCAGAGAATACTGGAGCTGTACACTG +
Preference number: 5 (lower is better)
Translates to: CRQPMVGGTHSSVTR*QSLPLFREYWSCTL
Trigger: CAGTGTACAGCTCCAGTATTCTCTGAACAATGGCAAGGACTGGCATCTTGTCACCGAAGAGTGTGTTCCTCCAACCATTGGCTGTCTGCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 90 bp CTCAGGTCACTGTTGCAGCTGTCCGTCTGCGACATGCTCCCAATTTaGAAAACAAACATGATTTTGCTTGCTCGAGTGAGATCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: LRSLLQLSVCDMLPI*KTNMILLARVRSRG
Trigger: GCCTCTGGATCTCACTCGAGCAAGCAAAATCATGTTTGTTTTGCAAATTGGGAGCATGTCGCAGACGGACAGCTGCAACAGTGACCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473945.1
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 90 bp GCTTGGGACCATGGAATGACACCAGAGCTGCTGCTAACTTGTAAGTaGAAAATCAGAAAAGATGACTATCTCCGAGCAGCCGCAAGCCCT +
Preference number: 5 (lower is better)
Translates to: AWDHGMTPELLLTCK*KIRKDDYLRAAASP
Trigger: AGGGCTTGCGGCTGCTCGGAGATAGTCATCTTTTCTGATTTTGCACTTACAAGTTAGCAGCAGCTCTGGTGTCATTCCATGGTCCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679952.1
CDS GCA 90 bp TCAAGTCAAGCTGGCTTGGGCTGCAAAGGGAGTTTAATGACAGGTTaGAGGGCTCAGTCTGAATTACAGCTCTGCAACTCCCTAAGCAAG +
Preference number: 5 (lower is better)
Translates to: SSQAGLGCKGSLMTG*RAQSELQLCNSLSK
Trigger: CTTGCTTAGGGAGTTGCAGAGCTGTAATTCAGACTGAGCCCTGCAACCTGTCATTAAACTCCCTTTGCAGCCCAAGCCAGCTTGACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS CCA 90 bp CCATCTAAACCAAATGGAGGCACGTTTTTCTGTGAGCTGCTCTCCTaGATCCATCGGAATCTGGTCTTGCTGGATGCAAGAGACCTTGGA +
Preference number: 5 (lower is better)
Translates to: PSKPNGGTFFCELLS*IHRNLVLLDARDLG
Trigger: TCCAAGGTCTCTTGCATCCAGCAAGACCAGATTCCGATGGATCCAGGAGAGCAGCTCACAGAAAAACGTGCCTCCATTTGGTTTAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CCA 90 bp TGCCAGTCCTTGCCATTGTTCAGAGAATACTGGAGCTGTACACTGTaGGAGTTGCTGAAGGGCTTGCTACAGCCCATGCTCATTTCAAAC +
Preference number: 5 (lower is better)
Translates to: CQSLPLFREYWSCTL*ELLKGLLQPMLISN
Trigger: GTTTGAAATGAGCATGGGCTGTAGCAAGCCCTTCAGCAACTCCCACAGTGTACAGCTCCAGTATTCTCTGAACAATGGCAAGGACTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS-3UTR CAA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCCAAAGCCCACTCGTCTaGAGCTGTGTAATAGCTCTG +
Preference number: 5 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITQSPLV*SCVIAL
Trigger: CAGAGCTATTACACAGCTCAAGACGAGTGGGCTTTG...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGCCCACTGCACATGTaGGGGCACTGCTGCCCAATG +
Preference number: 5 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVCPLHM*GHCCPM
Trigger: CATTGGGCAGCAGTGCCCCAACATGTGCAGTGGGCA...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAGTGGCATTCAGTGCCTaGGTACCCCTGGTCACACCT +
Preference number: 5 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQVAFSA*VPLVTP
Trigger: AGGTGTGACCAGGGGTACCAAGGCACTGAATGCCAC...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAGCAGACAGCCAATGGTaGGAGGAACACACTCTTCGG +
Preference number: 5 (lower is better)
Translates to: TLECNLSVTQIAFRATGPADSQW*EEHTLR
Trigger: CCGAAGAGTGTGTTCCTCCAACCATTGGCTGTCTGC...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCTTGTAGCATTGGTTaGGGCAGTGTATGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKSCSIG*GSVWQG
Trigger: CCCTTGCCATACACTGCCCAAACCAATGCTACAAGA...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATTGCCCGCTGCAGAGCTaGGGGCAAGCCTCTCCAATG +
Preference number: 5 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNCPLQS*GQASPM
Trigger: CATTGGAGAGGCTTGCCCCAAGCTCTGCAGCGGGCA...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCTCCTATGACTCCACCTaGAATGGTCTCCCAGTTTGC +
Preference number: 5 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSSYDST*NGLPVC
Trigger: GCAAACTGGGAGACCATTCAAGGTGGAGTCATAGGA...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS TCA 90 bp ATCCCAAATCCGAAAGCACTGGAACCTCCAATGCTCTGTGATGCCTaGACACTTGTAGATGTGTATAGTCCTGTCACCAGCAAGCCGTCA +
Preference number: 5 (lower is better)
Translates to: IPNPKALEPPMLCDA*TLVDVYSPVTSKPS
Trigger: TGACGGCTTGCTGGTGACAGGACTATACACATCTACAAGTGTTCAGGCATCACAGAGCATTGGAGGTTCCAGTGCTTTCGGATTTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681401.1
ENST00000681931.1
CDS TCA 90 bp AACTTCTTGCCAGTCAGACTCCCAGCCATTCTGGTTCTCAAAATCTaGCATAATTGTGGACGGAAGGGCAGCTTCTGGGTGGCATTCAGT +
Preference number: 5 (lower is better)
Translates to: NFLPVRLPAILVLKI*HNCGRKGSFWVAFS
Trigger: ACTGAATGCCACCCAGAAGCTGCCCTTCCGTCCACAATTATGTCAGATTTTGAGAACCAGAATGGCTGGGAGTCTGACTGGCAAGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 90 bp AGGAGGGAGAGGCAGAGTGATTCTAGTCCACTTGTTGAAAGTGTCTaGCACCAGGATCCGTTGCAGATGATAGCGACTGCATTCCACATT +
Preference number: 5 (lower is better)
Translates to: RRERQSDSSPLVESV*HQDPLQMIATAFHI
Trigger: AATGTGGAATGCAGTCGCTATCATCTGCAACGGATCCTGGTGTCAGACACTTTCAACAAGTGGACTAGAATCACTCTGCCTCTCCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681315.1
ENST00000681364.1
CDS TCA 90 bp TGGATTTGGGGGTTGATATGGATGCCATGCAAGCAGGTGCCTCAGTaGAAACTAAGACGAGGGCTAGCTCAAGACTGGAAAATTCAGCTC +
Preference number: 5 (lower is better)
Translates to: WIWGLIWMPCKQVPQ*KLRRGLAQDWKIQL
Trigger: GAGCTGAATTTTCCAGTCTTGAGCTAGCCCTCGTCTTAGTTTTCACTGAGGCACCTGCTTGCATGGCATCCATATCAACCCCCAAATCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000473945.1
ENST00000679867.1
ENST00000681921.1
CDS TCA 90 bp ACATTATCTATTGCCCATGTCTGCTGCTTGTCAAAAGGAGCTGGTTaGTGCCAACGGAAACGAGTGGCTTGGGACCATGGAATGACACCA +
Preference number: 5 (lower is better)
Translates to: TLSIAHVCCLSKGAG*CQRKRVAWDHGMTP
Trigger: TGGTGTCATTCCATGGTCCCAAGCCACTCGTTTCCGTTGGCATCAACCAGCTCCTTTTGACAAGCAGCAGACATGGGCAATAGATAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679952.1
CDS GCA 90 bp TGTACACTCCATCTAAACCAAATGGAGGCACGTTTTTCTGTGAGCTaGTCTCCTGGATCCATCGGAATCTGGTCTTGCTGGATGCAAGAG +
Preference number: 5 (lower is better)
Translates to: CTLHLNQMEARFSVS*SPGSIGIWSCWMQE
Trigger: CTCTTGCATCCAGCAAGACCAGATTCCGATGGATCCAGGAGAGCAGCTCACAGAAAAACGTGCCTCCATTTGGTTTAGATGGAGTGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 90 bp GTTCATCACAGACGCAGTTTCCCTGGATGCATCTCCCATGGCCACTaGACATGTCTATGCAGCCATCCCCGATATAGACATTATCTATTG +
Preference number: 5 (lower is better)
Translates to: VHHRRSFPGCISHGH*TCLCSHPRYRHYLL
Trigger: CAATAGATAATGTCTATATCGGGGATGGCTGCATAGACATGTGCAGTGGCCATGGGAGATGCATCCAGGGAAACTGCGTCTGTGATGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681364.1
CDS GCA 90 bp ATCTTGTGTAACCGCTTGTCTCACAGTGGATCCCCCAAAATAGAGTaGAGTGTCCTCGGCAAGAATTCCACACTCAGTGCAAGTACTTCC +
Preference number: 5 (lower is better)
Translates to: ILCNRLSHSGSPKIE*SVLGKNSTLSASTS
Trigger: GGAAGTACTTGCACTGAGTGTGGAATTCTTGCCGAGGACACTGCACTCTATTTTGGGGGATCCACTGTGAGACAAGCGGTTACACAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 90 bp GCCTTCATCATCAAAAGTGTCCACCAATTGGCTGGGATTGATTTCTaGTCCACCAATCAAAATGTTGTCCAGTGCCCACTGAGCACGCTC +
Preference number: 5 (lower is better)
Translates to: AFIIKSVHQLAGIDF*STNQNVVQCPLSTL
Trigger: GAGCGTGCTCAGTGGGCACTGGACAACATTTTGATTGGTGGAGCAGAAATCAATCCCAGCCAATTGGTGGACACTTTTGATGATGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 90 bp AACCGACTTACACGCAGTTTCCCTGGATGCATCTCCCATGGCCACTaGACATGTCTATGCAGCCATCCCCGATATAGACATTATCTATTG +
Preference number: 5 (lower is better)
Translates to: NRLTRSFPGCISHGH*TCLCSHPRYRHYLL
Trigger: CAATAGATAATGTCTATATCGGGGATGGCTGCATAGACATGTGCAGTGGCCATGGGAGATGCATCCAGGGAAACTGCGTGTAAGTCGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478148.2
CDS CCA 90 bp CCTTGTTCACACAACTGCTGGGCTAAAGCATCTTTGAAAATAACCTaGCCCCGGTGTGTTGCTGTAGCCATGAAATTCACACAGCCTGTG +
Preference number: 5 (lower is better)
Translates to: PCSHNCWAKASLKIT*PRCVAVAMKFTQPV
Trigger: CACAGGCTGTGTGAATTTCATGGCTACAGCAACACACCGGGGCCAGGTTATTTTCAAAGATGCTTTAGCCCAGCAGTTGTGTGAACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681401.1
ENST00000681931.1
CDS CCA 90 bp AGAAACACACTCCTGAAATGCAGTCCCCATGGCCACTGCAGTAACTaGGACAAGGCTCGGATATGTACACTCCATCTAAACCAAATGGAG +
Preference number: 5 (lower is better)
Translates to: RNTLLKCSPHGHCSN*DKARICTLHLNQME
Trigger: CTCCATTTGGTTTAGATGGAGTGTACATATCCGAGCCTTGTCCCAGTTACTGCAGTGGCCATGGGGACTGCATTTCAGGAGTGTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CCA 90 bp CTCCTCCTCTCTCTGCTCATGATTCCTCTGAGCCGTTATAGAGCATaGCTGCCCATAGCTCCTGAATGTTTACTTGTTCCTTGGATTCAG +
Preference number: 5 (lower is better)
Translates to: LLLSLLMIPLSRYRA*LPIAPECLLVPWIQ
Trigger: CTGAATCCAAGGAACAAGTAAACATTCAGGAGCTATGGGCAGCCATGCTCTATAACGGCTCAGAGGAATCATGAGCAGAGAGAGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS-3UTR CAA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACCTCGCTCATTCAGTTTaGGAGACGCCGGGACGGAGG +
Preference number: 5 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHLAHSV*ETPGRR
Trigger: CCTCCGTCCCGGCGTCTCCAAAACTGAATGAGCGAG...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACACAGAAGGTGACGGCATaGCCATGCATAATCGCGCCA +
Preference number: 5 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTQKVTA*PCIIAP
Trigger: TGGCGCGATTATGCATGGCAATGCCGTCACCTTCTG...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCACATGTTTCCAAGGATaGGTCCTGTTTGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITTCFQG*VLFVSS
Trigger: GCTGGAGACAAACAGGACCAATCCTTGGAAACATGT...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCCTGCCAGAACAGAATTaGAGACATGACGGGCCAATA +
Preference number: 5 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITLPEQN*RHDGPI
Trigger: TATTGGCCCGTCATGTCTCAAATTCTGTTCTGGCAG...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGCGCCGCCCATCTTTGTaGAAAACCAGGGCCTTACCA +
Preference number: 5 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRRRPSL*KTRALP
Trigger: TGGTAAGGCCCTGGTTTTCAACAAAGATGGGCGGCG...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGTGCCCACTGCACATGTaGGGGCACTGCTGCCCAATG +
Preference number: 5 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQCPLHM*GHCCPM
Trigger: CATTGGGCAGCAGTGCCCCAACATGTGCAGTGGGCA...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAATGCCCACTGCACATGTaGGGGCACTGCTGCCCAATG +
Preference number: 5 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKCPLHM*GHCCPM
Trigger: CATTGGGCAGCAGTGCCCCAACATGTGCAGTGGGCA...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGCTGCTGTCAGGCTTGTaGCATGAAGCACTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRLLSGL*HEALSP
Trigger: CGGAGAGAGTGCTTCATGCAACAAGCCTGACAGCAG...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAACCATCGAAATGCCGTaGCAGGTGTCTTCGCGTCCT +
Preference number: 5 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTTIEMP*QVSSRP
Trigger: AGGACGCGAAGACACCTGCAACGGCATTTCGATGGT...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCAGACAGCCAATGGTaGGAGGAACACACTCTTCGG +
Preference number: 5 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRADSQW*EEHTLR
Trigger: CCGAAGAGTGTGTTCCTCCAACCATTGGCTGTCTGC...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCTGCTTATTTTACAGGTaGGACCTGAGTAGCCAGGGT +
Preference number: 5 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITCLFYR*DLSSQG
Trigger: ACCCTGGCTACTCAGGTCCAACCTGTAAAATAAGCA...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGACCAGGCCGTCATGTCTaGGCTGCCACCAGCGGAAGC +
Preference number: 5 (lower is better)
Translates to: IVNTATVTDITTDHNFHGPGRHV*AATSGS
Trigger: GCTTCCGCTGGTGGCAGCCAAGACATGACGGCCTGG...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCCATGGCCCCTGCAGTaGTCCAAGCATCCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIPWPLQ*SKHPGP
Trigger: GGGCCCTGGATGCTTGGACAACTGCAGGGGCCATGG...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGACCATGGCCCCTGCAGTaGTCCAAGCATCCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: IVNTATVTDITTDHNFHGPWPLQ*SKHPGP
Trigger: GGGCCCTGGATGCTTGGACAACTGCAGGGGCCATGG...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGATGCGCCCCCAGTATaGCAGGAACTTTGCACCTCG +
Preference number: 5 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKDAPPV*QELCTS
Trigger: CGAGGTGCAAAGTTCCTGCAATACTGGGGGCGCATC...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACATGCCCGCTGCAGAGCTaGGGGCAAGCCTCTCCAATG +
Preference number: 5 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTCPLQS*GQASPM
Trigger: CATTGGAGAGGCTTGCCCCAAGCTCTGCAGCGGGCA...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTGCAGCAGCACTGCCTaGTCCACAGCGTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPCSSTA*STAWGP
Trigger: TGGCCCCCACGCTGTGGACAAGGCAGTGCTGCTGCA...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS TCA 90 bp CACAGAGGGCTGAGCTTCCCCTCAAACCTATCGAACATCTCATTGTaGTTGGGGACATTTGACACACAGGTTCCTTGTGCAGCAGTATAT +
Preference number: 5 (lower is better)
Translates to: HRGLSFPSNLSNISL*LGTFDTQVPCAAVY
Trigger: ATATACTGCTGCACAAGGAACCTGTGTGTCAAATGTCCCCAATCACAATGAGATGTTCGATAGGTTTGAGGGGAAGCTCAGCCCTCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 90 bp TGCCATTGTTCAGAGAATACTGGAGCTGTACACTGTGGGAGTTGCTaGAGGGCTTGCTACAGCCCATGCTCATTTCAAACTGCAAAAAGG +
Preference number: 5 (lower is better)
Translates to: CHCSENTGAVHCGSC*RACYSPCSFQTAKR
Trigger: CCTTTTTGCAGTTTGAAATGAGCATGGGCTGTAGCAAGCCCTTCAGCAACTCCCACAGTGTACAGCTCCAGTATTCTCTGAACAATGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 90 bp GGGAAGTGCCTTCATCATCAAAAGTGTCCACCAATTGGCTGGGATTaGTTTCTGCTCCACCAATCAAAATGTTGTCCAGTGCCCACTGAG +
Preference number: 5 (lower is better)
Translates to: GKCLHHQKCPPIGWD*FLLHQSKCCPVPTE
Trigger: CTCAGTGGGCACTGGACAACATTTTGATTGGTGGAGCAGAAATCAATCCCAGCCAATTGGTGGACACTTTTGATGATGAAGGCACTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS TCA 90 bp TTACCAAATCCGAAAGCACTGGAACCTCCAATGCTCTGTGATGCCTaGACACTTGTAGATGTGTATAGTCCTGTCACCAGCAAGCCGTCA +
Preference number: 5 (lower is better)
Translates to: LPNPKALEPPMLCDA*TLVDVYSPVTSKPS
Trigger: TGACGGCTTGCTGGTGACAGGACTATACACATCTACAAGTGTTCAGGCATCACAGAGCATTGGAGGTTCCAGTGCTTTCGGATTTGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS GCA 90 bp GGAACTGCCAAAGCTTTCAGAAATAAACATTGGGAATGTCTGGGATaGCATCTCACAAGCTGGGCCAGAAAATCCAGGGTCACACTTGCA +
Preference number: 5 (lower is better)
Translates to: GTAKAFRNKHWECLG*HLTSWARKSRVTLA
Trigger: TGCAAGTGTGACCCTGGATTTTCTGGCCCAGCTTGTGAGATGGCATCCCAGACATTCCCAATGTTTATTTCTGAAAGCTTTGGCAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
CDS GCA 90 bp ACTGCACATGTCTATGCAGCCATCCCCGATATAGACATTATCTATTaGCCATGTCTGCTGCTTGTCAAAAGGAGCTGGTTGATGCCAACG +
Preference number: 5 (lower is better)
Translates to: TAHVYAAIPDIDIIY*PCLLLVKRSWLMPT
Trigger: CGTTGGCATCAACCAGCTCCTTTTGACAAGCAGCAGACATGGGCAATAGATAATGTCTATATCGGGGATGGCTGCATAGACATGTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681364.1
CDS GCA 90 bp GGGAGTTTAATGACAGGTTGCAGGGCTCAGTCTGAATTACAGCTCTaGAACTCCCTAAGCAAGCATAACCTCCCGCAAGTTACTTATGCT +
Preference number: 5 (lower is better)
Translates to: GSLMTGCRAQSELQL*NSLSKHNLPQVTYA
Trigger: AGCATAAGTAACTTGCGGGAGGTTATGCTTGCTTAGGGAGTTGCAGAGCTGTAATTCAGACTGAGCCCTGCAACCTGTCATTAAACTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS CCA 90 bp ATAGACATTATCTATTGCCCATGTCTGCTGCTTGTCAAAAGGAGCTaGTTGATGCCAACGGAAACGAGTGGCTTGGGACCTGGTATAAGG +
Preference number: 5 (lower is better)
Translates to: IDIIYCPCLLLVKRS*LMPTETSGLGPGIR
Trigger: CCTTATACCAGGTCCCAAGCCACTCGTTTCCGTTGGCATCAACCAGCTCCTTTTGACAAGCAGCAGACATGGGCAATAGATAATGTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000681034.1
ENST00000681364.1
CDS CCA 90 bp TGTACTCAATTTCCCTCCGTTCACAGTCAGCCAGTTCTGACTGGATaGAGCTCGATTGAAGTTGTCTTTGAGTTGGGTTGGAAGAGAGGT +
Preference number: 5 (lower is better)
Translates to: CTQFPSVHSQPVLTG*SSIEVVFELGWKRG
Trigger: ACCTCTCTTCCAACCCAACTCAAAGACAACTTCAATCGAGCTCCATCCAGTCAGAACTGGCTGACTGTGAACGGAGGGAAATTGAGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000679952.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS CCA 90 bp ATAGACATTATCTATTGCCCATGTCTGCTGCTTGTCAAAAGGAGCTaGTTGATGCCAACGGAAACGAGTGGCTTGGGACCATGGAATGAC +
Preference number: 5 (lower is better)
Translates to: IDIIYCPCLLLVKRS*LMPTETSGLGPWND
Trigger: GTCATTCCATGGTCCCAAGCCACTCGTTTCCGTTGGCATCAACCAGCTCCTTTTGACAAGCAGCAGACATGGGCAATAGATAATGTCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679952.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCTCGCTCATTCAGTTTaGGAGACGCCGGGACGGAGG +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFILAHSV*ETPGRR
Trigger: CCTCCGTCCCGGCGTCTCCAAAACTGAATGAGCGAG...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTCAGAAGGTGACGGCATaGCCATGCATAATCGCGCCA +
Preference number: 5 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSQKVTA*PCIIAP
Trigger: TGGCGCGATTATGCATGGCAATGCCGTCACCTTCTG...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTACAGAAGGTGACGGCATaGCCATGCATAATCGCGCCA +
Preference number: 5 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVQKVTA*PCIIAP
Trigger: TGGCGCGATTATGCATGGCAATGCCGTCACCTTCTG...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAAAGGATTGGTCCTGTTaGTCTCCAGCGAATCCTGGT +
Preference number: 5 (lower is better)
Translates to: TLECNLSVTQIAFRATGPKDWSC*SPANPG
Trigger: ACCAGGATTCGCTGGAGACAAACAGGACCAATCCTT...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAGTGCTCAGAACAGATTaGCTCCCCAGTCTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQVLRTD*LPSLSV
Trigger: CACACTGAGACTGGGGAGCAAATCTGTTCTGAGCAC...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTTCCAGCTTCACCTGGTaGTCCATGTGTGGGGTGTAT +
Preference number: 5 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAISSFTW*SMCGVY
Trigger: ATACACCCCACACATGGACAACCAGGTGAAGCTGGA...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACATCCAGCTTCACCTGGTaGTCCATGTGTGGGGTGTAT +
Preference number: 5 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTSSFTW*SMCGVY
Trigger: ATACACCCCACACATGGACAACCAGGTGAAGCTGGA...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTACAGGTAAGGCCGTGGTaGGTTGAGTACTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVQVRPW*VEYSSF
Trigger: GAAGCTGGAGTACTCAACCAACCACGGCCTTACCTG...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTACTGCTGTCAGGCTTGTaGCATGAAGCACTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVLLSGL*HEALSP
Trigger: CGGAGAGAGTGCTTCATGCAACAAGCCTGACAGCAG...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATCTGGTGCAAGGGGTCTaGGCAGCAGCTGGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYLVQGV*AAAGSS
Trigger: GGAGCTTCCAGCTGCTGCCAAGACCCCTTGCACCAG...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCACTGGTGCAAGGGGTCTaGGCAGCAGCTGGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSLVQGV*AAAGSS
Trigger: GGAGCTTCCAGCTGCTGCCAAGACCCCTTGCACCAG...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGACCATCGAAATGCCGTaGCAGGTGTCTTCGCGTCCT +
Preference number: 5 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKTIEMP*QVSSRP
Trigger: AGGACGCGAAGACACCTGCAACGGCATTTCGATGGT...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGTGTACACTGTGGGAGTaGCTGAAGGGCTTGCTACAG +
Preference number: 5 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRCTLWE*LKGLLQ
Trigger: CTGTAGCAAGCCCTTCAGCAACTCCCACAGTGTACA...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATCTTGTAGCATTGGTTaGGGCAGTGTATGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: TLECNLSVTQIAFRATGPSCSIG*GSVWQG
Trigger: CCCTTGCCATACACTGCCCAAACCAATGCTACAAGA...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGTCGCCCCGAAGTCCCTaGAAAATTCCAGTCTCACTG +
Preference number: 5 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRSPRSP*KIPVSL
Trigger: CAGTGAGACTGGAATTTTCAAGGGACTTCGGGGCGA...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTTCGCCCCGAAGTCCCTaGAAAATTCCAGTCTCACTG +
Preference number: 5 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAISPRSP*KIPVSL
Trigger: CAGTGAGACTGGAATTTTCAAGGGACTTCGGGGCGA...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTACGGAAACGAGTGGCTaGGGACCTGGTATAAGGAGG +
Preference number: 5 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLTETSG*GPGIRR
Trigger: CCTCCTTATACCAGGTCCCAAGCCACTCGTTTCCGT...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGCGATTGAAGTTGTCTTaGAGTTGGGTTGGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKRLKLS*SWVGRE
Trigger: CTCTCTTCCAACCCAACTCAAAGACAACTTCAATCG...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCTTCCAAGAGAACACCTaGGTTACGGTTGTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSFQENT*VTVVWC
Trigger: ACACCAAACAACCGTAACCAAGGTGTTCTCTTGGAA...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACACACTTCCAGAGCATTTaGGGTCAGCAGGCAAGCACT +
Preference number: 5 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTHFQSI*GQQAST
Trigger: AGTGCTTGCCTGCTGACCCAAAATGCTCTGGAAGTG...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAATGCCCGCTGCAGAGCTaGGGGCAAGCCTCTCCAATG +
Preference number: 5 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKCPLQS*GQASPM
Trigger: CATTGGAGAGGCTTGCCCCAAGCTCTGCAGCGGGCA...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTAGAGCAGTCATCACCTaGGAAGCTCTCGTCGCAGAT +
Preference number: 5 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIRAVIT*EALVAD
Trigger: ATCTGCGACGAGAGCTTCCAAGGTGATGACTGCTCT...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTTGCAGCAGCACTGCCTaGTCCACAGCGTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCACSSTA*STAWGP
Trigger: TGGCCCCCACGCTGTGGACAAGGCAGTGCTGCTGCA...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTTGCAGCAGCACTGCCTaGTCCACAGCGTGGGGGCCA +
Preference number: 5 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYICSSTA*STAWGP
Trigger: TGGCCCCCACGCTGTGGACAAGGCAGTGCTGCTGCA...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGCCAGGTGATCCCGTaGTTGACGCTGTATTGCAGC +
Preference number: 5 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVCQVIP*LTLYCS
Trigger: GCTGCAATACAGCGTCAACAACGGGATCACCTGGCA...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACTGCCAGGTGATCCCGTaGTTGACGCTGTATTGCAGC +
Preference number: 5 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYCQVIP*LTLYCS
Trigger: GCTGCAATACAGCGTCAACAACGGGATCACCTGGCA...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGATGGTCCAAAGCCCATaGATCATGACCTGTTCCATT +
Preference number: 5 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKMVQSP*IMTCSI
Trigger: AATGGAACAGGTCATGATCAATGGGCTTTGGACCAT...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CAA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAACTCCTTGCCAACCACTaGGAGCCATCAGTCCGAACC +
Preference number: 5 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKLLANH*EPSVRT
Trigger: GGTTCGGACTGATGGCTCCAAGTGGTTGGCAAGGAG...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681034.1
CDS TCA 90 bp CCTGTGTCCACTGGGTCGAGACTATCTTCTAAAACGACTTGTCTGTaGGCTGAATTGATGATCAAGATGTTATCTAAGGCCCAGCAGGCT +
Preference number: 5 (lower is better)
Translates to: PVSTGSRLSSKTTCL*AELMIKMLSKAQQA
Trigger: AGCCTGCTGGGCCTTAGATAACATCTTGATCATCAATTCAGCTCACAGACAAGTCGTTTTAGAAGATAGTCTCGACCCAGTGGACACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681931.1
CDS TCA 90 bp CCCATACATCTTCTCTCTGGGAAGAATGATACGGTTGCCACCATCTaGACTGAATTCCAAACTGCTTTGCATCACCTGGTAGTTCTACGG +
Preference number: 5 (lower is better)
Translates to: PIHLLSGKNDTVATI*TEFQTALHHLVVLR
Trigger: CCGTAGAACTACCAGGTGATGCAAAGCAGTTTGGAATTCAGTTCAGATGGTGGCAACCGTATCATTCTTCCCAGAGAGAAGATGTATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 90 bp CTTCCCCTCAAACCTATCGAACATCTCATTGTGATTGGGGACATTTaGCACACAGGTTCCTTGTGCAGCAGTATATCCCAGGTCACAGAA +
Preference number: 5 (lower is better)
Translates to: LPLKPIEHLIVIGDI*HTGSLCSSISQVTE
Trigger: TTCTGTGACCTGGGATATACTGCTGCACAAGGAACCTGTGTGTCAAATGTCCCCAATCACAATGAGATGTTCGATAGGTTTGAGGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 90 bp TCTACAGGAACTAGATCATTAGAGAAAAAGCAAGTCATCTCTCTGTaGGGGAACAGTCAACCCGGCCAGGTGAGAGTGGTGACAGCTTTA +
Preference number: 5 (lower is better)
Translates to: STGTRSLEKKQVISL*GNSQPGQVRVVTAL
Trigger: TAAAGCTGTCACCACTCTCACCTGGCCGGGTTGACTGTTCCCTCACAGAGAGATGACTTGCTTTTTCTCTAATGATCTAGTTCCTGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS GCA 90 bp CGACTGCATTCCACATTGGTAGGCAGACAGTCCCTTACCAATGGGTaGCATGACAATCCAAGATCTACTGAGTATTCCAATTCAATCGCA +
Preference number: 5 (lower is better)
Translates to: RLHSTLVGRQSLTNG*HDNPRSTEYSNSIA
Trigger: TGCGATTGAATTGGAATACTCAGTAGATCTTGGATTGTCATGGCACCCATTGGTAAGGGACTGTCTGCCTACCAATGTGGAATGCAGTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681315.1
ENST00000681364.1
CDS GCA 90 bp TCTTGTTGCCGATGCCCGCCTGTACTTTGGACACCTTACACGCCTTaGCATATCAGAATTTTTAACCACAGAACAATCTTTCTGAACCCC +
Preference number: 5 (lower is better)
Translates to: SCCRCPPVLWTPYTP*HIRIFNHRTIFLNP
Trigger: GGGGTTCAGAAAGATTGTTCTGTGGTTAAAAATTCTGATATGGCAAGGCGTGTAAGGTGTCCAAAGTACAGGCGGGCATCGGCAACAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS GCA 90 bp AGCAACTATCTTTCTTTCTCACTGGACGTAAGTACGGAAGCATCCTaGCCCAGTTCTCTGGCTGCCATCTCATGTTCAATAGCAAAACCA +
Preference number: 5 (lower is better)
Translates to: SNYLSFSLDVSTEAS*PSSLAAISCSIAKP
Trigger: TGGTTTTGCTATTGAACATGAGATGGCAGCCAGAGAACTGGGGCAGGATGCTTCCGTACTTACGTCCAGTGAGAAAGAAAGATAGTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681921.1
CDS CCA 90 bp TTCAGAAATAAACATTGGGAATGTCTGGGATGCCATCTCACAAGCTaGGCCAGAAAATCCAGGGTCACACTTGCAACCATGTCTAGTGCA +
Preference number: 5 (lower is better)
Translates to: FRNKHWECLGCHLTS*ARKSRVTLATMSSA
Trigger: TGCACTAGACATGGTTGCAAGTGTGACCCTGGATTTTCTGGCCCAGCTTGTGAGATGGCATCCCAGACATTCCCAATGTTTATTTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
CDS CCA 90 bp TTTAGAATCTCCTGTAAAACAAAGGGTCCAGTCGTGGCCACAGTATaGCTGAACATTTCCAAGGTAGAATCCCAGAGACTGAGTGACCTC +
Preference number: 5 (lower is better)
Translates to: FRISCKTKGPVVATV*LNISKVESQRLSDL
Trigger: GAGGTCACTCAGTCTCTGGGATTCTACCTTGGAAATGTTCAGCCATACTGTGGCCACGACTGGACCCTTTGTTTTACAGGAGATTCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CCA 90 bp ATTTCTCCCCCAATAACTTCTTGCCAGTCAGACTCCCAGCCATTCTaGTTCTCAAAATCTGACATAATTGTGGACGGAAGGGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: ISPPITSCQSDSQPF*FSKSDIIVDGRAAS
Trigger: AGAAGCTGCCCTTCCGTCCACAATTATGTCAGATTTTGAGAACCAGAATGGCTGGGAGTCTGACTGGCAAGAAGTTATTGGGGGAGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CCA 90 bp TGGGTAGGTGATCCTTTTCCACCCTTTAGTTGGAAAGAATACAGATaGCTGAGAAACACTTCCAGAGCATTTTGGGTCAGCAGGCAAGCA +
Preference number: 5 (lower is better)
Translates to: WVGDPFPPFSWKEYR*LRNTSRAFWVSRQA
Trigger: TGCTTGCCTGCTGACCCAAAATGCTCTGGAAGTGTTTCTCAGCCATCTGTATTCTTTCCAACTAAAGGGTGGAAAAGGATCACCTACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CCA 90 bp TCCTGTCTGGGCTATATTTATTTCCTCTTCTCTTCAGCCTCCCCCTaGACCCTGCCTTTCTCTCTCTCTCATTCTTTCTGTCTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: SCLGYIYFLFSSASP*TLPFSLSHSFCLLF
Trigger: AAAGAGAAGACAGAAAGAATGAGAGAGAGAGAAAGGCAGGGTCCAGGGGGAGGCTGAAGAGAAGAGGAAATAAATATAGCCCAGACAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478148.2
CDS CCA 90 bp TCCACAGACTTTGCAGAGCAAGGTTTAATCACCTCTGCTCATCACTaGTCCAGGCTAATTACCTCTCACTGCAGGATCAGAATACAATGC +
Preference number: 5 (lower is better)
Translates to: STDFAEQGLITSAHH*SRLITSHCRIRIQC
Trigger: GCATTGTATTCTGATCCTGCAGTGAGAGGTAATTAGCCTGGACCAGTGATGAGCAGAGGTGATTAAACCTTGCTCTGCAAAGTCTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681921.1
CDS-3UTR CAA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGACTCGCTCATTCAGTTTaGGAGACGCCGGGACGGAGG +
Preference number: 5 (lower is better)
Translates to: IVNTATVTDITTDHNFHGLAHSV*ETPGRR
Trigger: CCTCCGTCCCGGCGTCTCCAAAACTGAATGAGCGAG...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCTCGCTCATTCAGTTTaGGAGACGCCGGGACGGAGG +
Preference number: 5 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSILAHSV*ETPGRR
Trigger: CCTCCGTCCCGGCGTCTCCAAAACTGAATGAGCGAG...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGCAGAAGGTGACGGCATaGCCATGCATAATCGCGCCA +
Preference number: 5 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQQKVTA*PCIIAP
Trigger: TGGCGCGATTATGCATGGCAATGCCGTCACCTTCTG...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCTTCCTCTCTCCATCTTaGAGGAAGACCATTGATAAG +
Preference number: 5 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITFLSPS*RKTIDK
Trigger: CTTATCAATGGTCTTCCTCAAAGATGGAGAGAGGAA...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAACATGTTTCCAAGGATaGGTCCTGTTTGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TLECNLSVTQIAFRATGPTCFQG*VLFVSS
Trigger: GCTGGAGACAAACAGGACCAATCCTTGGAAACATGT...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAACGCCGCCCATCTTTGTaGAAAACCAGGGCCTTACCA +
Preference number: 5 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKRRPSL*KTRALP
Trigger: TGGTAAGGCCCTGGTTTTCAACAAAGATGGGCGGCG...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATACGCCGCCCATCTTTGTaGAAAACCAGGGCCTTACCA +
Preference number: 5 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIRRPSL*KTRALP
Trigger: TGGTAAGGCCCTGGTTTTCAACAAAGATGGGCGGCG...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCGAATTCCAAACTGCTTaGCATCACCTGGTAGTTCTA +
Preference number: 5 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSEFQTA*HHLVVL
Trigger: TAGAACTACCAGGTGATGCAAAGCAGTTTGGAATTC...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCATGCTCCTATCTGCATaGATTGTGTTTCCACATAGC +
Preference number: 5 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSMLLSA*IVFPHS
Trigger: GCTATGTGGAAACACAATCAATGCAGATAGGAGCAT...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTGCCCACTGCACATGTaGGGGCACTGCTGCCCAATG +
Preference number: 5 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPCPLHM*GHCCPM
Trigger: CATTGGGCAGCAGTGCCCCAACATGTGCAGTGGGCA...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGTCCCCCAATAACTTCTaGCCAGTCAGACTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQSPNNF*PVRLPA
Trigger: GGCTGGGAGTCTGACTGGCAAGAAGTTATTGGGGGA...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATGTGATTGGGGACATTaGACACACAGGTTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: TLECNLSVTQIAFRATGPCDWGH*THRFLV
Trigger: CACAAGGAACCTGTGTGTCAAATGTCCCCAATCACA...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGTGGGCACCTGTTATCTaGTACCACAGAGGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQWAPVI*YHRGLS
Trigger: GCTCAGCCCTCTGTGGTACAAGATAACAGGTGCCCA...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGATGGGCACCTGTTATCTaGTACCACAGAGGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRWAPVI*YHRGLS
Trigger: GCTCAGCCCTCTGTGGTACAAGATAACAGGTGCCCA...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATATGGGCACCTGTTATCTaGTACCACAGAGGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIWAPVI*YHRGLS
Trigger: GCTCAGCCCTCTGTGGTACAAGATAACAGGTGCCCA...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACCTTCCCATGTTGCGGTaGCCACCATCGAAATGCCGT +
Preference number: 5 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNLPMLR*PPSKCR
Trigger: ACGGCATTTCGATGGTGGCAACCGCAACATGGGAAG...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCACTGAATCTTGTAGCATaGGTTTGGGCAGTGTATGGC +
Preference number: 5 (lower is better)
Translates to: TLECNLSVTQIAFRATGPLNLVA*VWAVYG
Trigger: GCCATACACTGCCCAAACCAATGCTACAAGATTCAG...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGCTTCAGGTGCCCCCTTaGAAGAATATGGACAATAAA +
Preference number: 5 (lower is better)
Translates to: VGKWCTLGLEKGFQVITKLQVPP*KNMDNK
Trigger: TTTATTGTCCATATTCTTCAAAGGGGGCACCTGAAG...CTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCCTTCAGGTGCCCCCTTaGAAGAATATGGACAATAAA +
Preference number: 5 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITLQVPP*KNMDNK
Trigger: TTTATTGTCCATATTCTTCAAAGGGGGCACCTGAAG...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACCACGAGAGGCCACCGTaGAGAGAATACTGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHHERPP*REYCRS
Trigger: GCTCCTACAGTATTCTCTCAACGGTGGCCTCTCGTG...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATACACGAGAGGCCACCGTaGAGAGAATACTGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIHERPP*REYCRS
Trigger: GCTCCTACAGTATTCTCTCAACGGTGGCCTCTCGTG...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATCCCATTCTCAGACGGTaGCCACCAGCGAAGGCGAGT +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYPILRR*PPAKAS
Trigger: ACTCGCCTTCGCTGGTGGCAACCGTCTGAGAATGGG...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTCCCATTCTCAGACGGTaGCCACCAGCGAAGGCGAGT +
Preference number: 5 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPPILRR*PPAKAS
Trigger: ACTCGCCTTCGCTGGTGGCAACCGTCTGAGAATGGG...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAACCCATTCTCAGACGGTaGCCACCAGCGAAGGCGAGT +
Preference number: 5 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKPILRR*PPAKAS
Trigger: ACTCGCCTTCGCTGGTGGCAACCGTCTGAGAATGGG...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTACGACTGCATTCCACATaGGTAGGCAGACAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVRLHST*VGRQSL
Trigger: AAGGGACTGTCTGCCTACCAATGTGGAATGCAGTCG...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAGAAGTTGTCTTTGAGTaGGGTTGGAAGAGAGGTCTC +
Preference number: 5 (lower is better)
Translates to: TLECNLSVTQIAFRATGPEVVFE*GWKRGL
Trigger: GAGACCTCTCTTCCAACCCAACTCAAAGACAACTTC...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTCCTGAGATGAGGACATaGTCAATGGCCCAGTCGTTC +
Preference number: 5 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSPEMRT*SMAQSF
Trigger: GAACGACTGGGCCATTGACAATGTCCTCATCTCAGG...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTCACTTCCAGAGCATTTaGGGTCAGCAGGCAAGCACT +
Preference number: 5 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLHFQSI*GQQAST
Trigger: AGTGCTTGCCTGCTGACCCAAAATGCTCTGGAAGTG...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACGGGTCAAGTAGCAGTTaGGCCCTGAGTATCCCGGAT +
Preference number: 5 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNGSSSS*ALSIPD
Trigger: ATCCGGGATACTCAGGGCCAAACTGCTACTTGACCC...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTCGAAGTCGAGTTGTGTaGGTGAGGGCATCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSRSRVV*VRASSG
Trigger: TCCTGAAGATGCCCTCACCAACACAACTCGACTTCG...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTTGCCCGCTGCAGAGCTaGGGGCAAGCCTCTCCAATG +
Preference number: 5 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCACPLQS*GQASPM
Trigger: CATTGGAGAGGCTTGCCCCAAGCTCTGCAGCGGGCA...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGAGAGCAGTCATCACCTaGGAAGCTCTCGTCGCAGAT +
Preference number: 5 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKRAVIT*EALVAD
Trigger: ATCTGCGACGAGAGCTTCCAAGGTGATGACTGCTCT...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATGTGAGATCCAGAGGCTaGGTAGCTGCTTGCCTGATC +
Preference number: 5 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNVRSRG*VAACLI
Trigger: GATCAGGCAAGCAGCTACCAAGCCTCTGGATCTCAC...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAGTGAGATCCAGAGGCTaGGTAGCTGCTTGCCTGATC +
Preference number: 5 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIVRSRG*VAACLI
Trigger: GATCAGGCAAGCAGCTACCAAGCCTCTGGATCTCAC...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCGTTGTTGACGCTGTATaGCAGCAGCACTGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSVVDAV*QQHCLV
Trigger: GACAAGGCAGTGCTGCTGCAATACAGCGTCAACAAC...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACGTTGTTGACGCTGTATaGCAGCAGCACTGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYVVDAV*QQHCLV
Trigger: GACAAGGCAGTGCTGCTGCAATACAGCGTCAACAAC...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAACAGGTGATCCCGTTGTaGACGCTGTATTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKQVIPL*TLYCSS
Trigger: GCTGCTGCAATACAGCGTCAACAACGGGATCACCTG...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCGAAATGGGAACTTATTaGTGGGAGATAGGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITEMGTY*WEIGSS
Trigger: TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTC...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CAA 90 bp AGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAGGGCCATTATAATGTaGCTGGTGTTGTACAACTTC +
Preference number: 5 (lower is better)
Translates to: SVGKWCTLGLEKGFQVITRAIIM*LVLYNF
Trigger: GAAGTTGTACAACACCAGCAACATTATAATGGCCCT...GGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCCCACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS TCA 90 bp TCCCATCCTGTAGGCTGGCTCTCAAATTCTTCTGACCATTGCTCTTaGATATCTTCTGTGGAAAGATCTACATCCCTGGTGGTGGCAAAA +
Preference number: 5 (lower is better)
Translates to: SHPVGWLSNSSDHCS*ISSVERSTSLVVAK
Trigger: TTTTGCCACCACCAGGGATGTAGATCTTTCCACAGAAGATATTCAAGAGCAATGGTCAGAAGAATTTGAGAGCCAGCCTACAGGATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681931.1
CDS TCA 90 bp GACAGTGATCCGCTTCCAATTCTGGAATCTTTCCGAGGTGTAAATTaGACTTTCCGTGTAATGCAGACAGCCAATGGTTGGAGGAACACA +
Preference number: 5 (lower is better)
Translates to: DSDPLPILESFRGVN*TFRVMQTANGWRNT
Trigger: TGTGTTCCTCCAACCATTGGCTGTCTGCATTACACGGAAAGTTCAATTTACACCTCGGAAAGATTCCAGAATTGGAAGCGGATCACTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 90 bp GCATCCAGGGCCCAGGTAGAAATTATCGATTGCCCACTGCATGTCTaGGTACTTCTGATAGAACCTAAACCTTACCGGACTATTGACAAT +
Preference number: 5 (lower is better)
Translates to: ASRAQVEIIDCPLHV*VLLIEPKPYRTIDN
Trigger: ATTGTCAATAGTCCGGTAAGGTTTAGGTTCTATCAGAAGTACTCAGACATGCAGTGGGCAATCGATAATTTCTACCTGGGCCCTGGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679371.1
ENST00000681921.1
CDS GCA 90 bp CCCACAGCCACTTCCTATGACTCCACCTTGAATGGTCTCCCAGTTTaGCTCGGTGACTCTTGCGGACTCAAAATTATCTTTAATATAACT +
Preference number: 5 (lower is better)
Translates to: PTATSYDSTLNGLPV*LGDSCGLKIIFNIT
Trigger: AGTTATATTAAAGATAATTTTGAGTCCGCAAGAGTCACCGAGGCAAACTGGGAGACCATTCAAGGTGGAGTCATAGGAAGTGGCTGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CCA 90 bp TTCTCAGTCAAGGTTCTTTGGGTGATGATAAAAATCAAGTCAAGCTaGCTTGGGCTGCAAAGGGAGTTTAATGACAGGTTGCAGGGCTCA +
Preference number: 5 (lower is better)
Translates to: FSVKVLWVMIKIKSS*LGLQREFNDRLQGS
Trigger: TGAGCCCTGCAACCTGTCATTAAACTCCCTTTGCAGCCCAAGCCAGCTTGACTTGATTTTTATCATCACCCAAAGAACCTTGACTGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS-3UTR CAA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAATCTGTTGGAGCTCCTaGTTCACACAACTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIICWSS*FTQLLG
Trigger: GCCCAGCAGTTGTGTGAACAAGGAGCTCCAACAGAT...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACATCTGTTGGAGCTCCTaGTTCACACAACTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNICWSS*FTQLLG
Trigger: GCCCAGCAGTTGTGTGAACAAGGAGCTCCAACAGAT...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAACAGGAGCGCCCATGGTaGGTAGAAAATTCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKQERPW*VENSKL
Trigger: CAGCTTGGAATTTTCTACCAACCATGGGCGCTCCTG...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAAGGATTGGTCCTGTTaGTCTCCAGCGAATCCTGGT +
Preference number: 5 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYKDWSC*SPANPG
Trigger: ACCAGGATTCGCTGGAGACAAACAGGACCAATCCTT...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCAATCCAGGGTCACACTaGCAACCATGTCTAGTGCAC +
Preference number: 5 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSNPGSH*QPCLVH
Trigger: GTGCACTAGACATGGTTGCAAGTGTGACCCTGGATT...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATGTGCTCAGAACAGATTaGCTCCCCAGTCTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNVLRTD*LPSLSV
Trigger: CACACTGAGACTGGGGAGCAAATCTGTTCTGAGCAC...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGGTGCTCAGAACAGATTaGCTCCCCAGTCTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQVLRTD*LPSLSV
Trigger: CACACTGAGACTGGGGAGCAAATCTGTTCTGAGCAC...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGATCCAGCTTCACCTGGTaGTCCATGTGTGGGGTGTAT +
Preference number: 5 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRSSFTW*SMCGVY
Trigger: ATACACCCCACACATGGACAACCAGGTGAAGCTGGA...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGCAAAGCCCACTCGTCTaGAGCTGTGTAATAGCTCTG +
Preference number: 5 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKQSPLV*SCVIAL
Trigger: CAGAGCTATTACACAGCTCAAGACGAGTGGGCTTTG...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTGTGGCATTCAGTGCCTaGGTACCCCTGGTCACACCT +
Preference number: 5 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPVAFSA*VPLVTP
Trigger: AGGTGTGACCAGGGGTACCAAGGCACTGAATGCCAC...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGGTGGCATTCAGTGCCTaGGTACCCCTGGTCACACCT +
Preference number: 5 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPVAFSA*VPLVTP
Trigger: AGGTGTGACCAGGGGTACCAAGGCACTGAATGCCAC...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTCCCCCAATAACTTCTaGCCAGTCAGACTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFISPNNF*PVRLPA
Trigger: GGCTGGGAGTCTGACTGGCAAGAAGTTATTGGGGGA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGTCTCTGCTGTCAGGCTaGTTGCATGAAGCACTCTCT +
Preference number: 5 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKSLLSG*LHEALS
Trigger: AGAGAGTGCTTCATGCAACAAGCCTGACAGCAGAGA...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACATGGGCACCTGTTATCTaGTACCACAGAGGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTWAPVI*YHRGLS
Trigger: GCTCAGCCCTCTGTGGTACAAGATAACAGGTGCCCA...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAGAGTTGCTGAAGGGCTaGCTACAGCCCATGCTCATT +
Preference number: 5 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKELLKG*LQPMLI
Trigger: AATGAGCATGGGCTGTAGCAAGCCCTTCAGCAACTC...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGCCAGTCCTTGCCATaGTTCAGAGAATACTGGAGC +
Preference number: 5 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVCQSLP*FREYWS
Trigger: GCTCCAGTATTCTCTGAACAATGGCAAGGACTGGCA...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCGCAGACAGCCAATGGTaGGAGGAACACACTCTTCGG +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIADSQW*EEHTLR
Trigger: CCGAAGAGTGTGTTCCTCCAACCATTGGCTGTCTGC...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTGCAGACAGCCAATGGTaGGAGGAACACACTCTTCGG +
Preference number: 5 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIADSQW*EEHTLR
Trigger: CCGAAGAGTGTGTTCCTCCAACCATTGGCTGTCTGC...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAATGCTTATTTTACAGGTaGGACCTGAGTAGCCAGGGT +
Preference number: 5 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQCLFYR*DLSSQG
Trigger: ACCCTGGCTACTCAGGTCCAACCTGTAAAATAAGCA...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACGAGAGGCCACCGTaGAGAGAATACTGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIHERPP*REYCRS
Trigger: GCTCCTACAGTATTCTCTCAACGGTGGCCTCTCGTG...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTCCCATTCTCAGACGGTaGCCACCAGCGAAGGCGAGT +
Preference number: 5 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAPILRR*PPAKAS
Trigger: ACTCGCCTTCGCTGGTGGCAACCGTCTGAGAATGGG...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTACGGAAACGAGTGGCTaGGGACCTGGTATAAGGAGG +
Preference number: 5 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTITETSG*GPGIRR
Trigger: CCTCCTTATACCAGGTCCCAAGCCACTCGTTTCCGT...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTCAAAAGGAGCTGGTaGATGCCAACGGAAACGAGT +
Preference number: 5 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKVKRSW*MPTETS
Trigger: ACTCGTTTCCGTTGGCATCAACCAGCTCCTTTTGAC...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACCCTGAGATGAGGACATaGTCAATGGCCCAGTCGTTC +
Preference number: 5 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNPEMRT*SMAQSF
Trigger: GAACGACTGGGCCATTGACAATGTCCTCATCTCAGG...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAGGTAGAAATTATCGATaGCCCACTGCATGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: TLECNLSVTQIAFRATGPGRNYR*PTACLS
Trigger: ACTCAGACATGCAGTGGGCAATCGATAATTTCTACC...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAATCTTGTGTAACCGCTaGTCTCACAGTGGATCCCCC +
Preference number: 5 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRILCNR*SHSGSP
Trigger: GGGGGATCCACTGTGAGACAAGCGGTTACACAAGAT...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTGATGCGCCCCCAGTATaGCAGGAACTTTGCACCTCG +
Preference number: 5 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIDAPPV*QELCTS
Trigger: CGAGGTGCAAAGTTCCTGCAATACTGGGGGCGCATC...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAACCAATTGGCTGGGATaGATTTCTGCTCCACCAATC +
Preference number: 5 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQTNWLG*ISAPPI
Trigger: GATTGGTGGAGCAGAAATCAATCCCAGCCAATTGGT...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATCCTATGACTCCACCTaGAATGGTCTCCCAGTTTGC +
Preference number: 5 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVSYDST*NGLPVC
Trigger: GCAAACTGGGAGACCATTCAAGGTGGAGTCATAGGA...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTGTGAGATCCAGAGGCTaGGTAGCTGCTTGCCTGATC +
Preference number: 5 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIVRSRG*VAACLI
Trigger: GATCAGGCAAGCAGCTACCAAGCCTCTGGATCTCAC...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTCCACTCAGGTCACTGTaGCAGCTGTCCGTCTGCGAC +
Preference number: 5 (lower is better)
Translates to: DITTDHNFHGHINMKTFTPLRSL*QLSVCD
Trigger: GTCGCAGACGGACAGCTGCAACAGTGACCTGAGTGG...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAGTTGTTGACGCTGTATaGCAGCAGCACTGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIVVDAV*QQHCLV
Trigger: GACAAGGCAGTGCTGCTGCAATACAGCGTCAACAAC...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS TCA 90 bp GGAATAACAATGGTGATTCTTGTCCATTCTTCAAAGTCCCCTGTGTaGTACATGGTGGGCTCACTTAGTTCTCTGGAGTTTCCTTCGCAT +
Preference number: 5 (lower is better)
Translates to: GITMVILVHSSKSPV*YMVGSLSSLEFPSH
Trigger: ATGCGAAGGAAACTCCAGAGAACTAAGTGAGCCCACCATGTATCACACAGGGGACTTTGAAGAATGGACAAGAATCACCATTGTTATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 90 bp TGGTGCCTCCTGGGTGAAGCAGCCATTTCCTACTATCAAGGGTTGTaGAATCATCTTCCAAGACCGTATTACCAGAAATATTTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: WCLLGEAAISYYQGL*NHLPRPYYQKYFLQ
Trigger: TTGGAGGAAATATTTCTGGTAATACGGTCTTGGAAGATGATTTCACAACCCTTGATAGTAGGAAATGGCTGCTTCACCCAGGAGGCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681315.1
ENST00000681364.1
CDS TCA 90 bp CAGGAATCCGATCTTGCATCCTTAGTGTATTCCAGCATTACGGAATaGAGGTCACCACAAGAAGTGGCTTCACAACCCACCACAATTTTA +
Preference number: 5 (lower is better)
Translates to: QESDLASLVYSSITE*RSPQEVASQPTTIL
Trigger: TAAAATTGTGGTGGGTTGTGAAGCCACTTCTTGTGGTGACCTTCATTCCGTAATGCTGGAATACACTAAGGATGCAAGATCGGATTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS TCA 90 bp AGAAATGGAAAGTTCTGCCTTTTTCGTTTGTTTGTTTGTTTGTTTTaGTCTGTTGGCCTGCTCAGAACTGGCACTGGACGGCCAGCAGAA +
Preference number: 5 (lower is better)
Translates to: RNGKFCLFRLFVCLF*SVGLLRTGTGRPAE
Trigger: TTCTGCTGGCCGTCCAGTGCCAGTTCTGAGCAGGCCAACAGATCAAAACAAACAAACAAACAAACGAAAAAGGCAGAACTTTCCATTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478148.2
ENST00000681364.1
CDS GCA 90 bp TATGACTCCACCTTGAATGGTCTCCCAGTTTGCCTCGGTGACTCTTaGGGACTCAAAATTATCTTTAATATAACTGGGAAGGTCGTGACT +
Preference number: 5 (lower is better)
Translates to: YDSTLNGLPVCLGDS*GLKIIFNITGKVVT
Trigger: AGTCACGACCTTCCCAGTTATATTAAAGATAATTTTGAGTCCGCAAGAGTCACCGAGGCAAACTGGGAGACCATTCAAGGTGGAGTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 90 bp CTGGGGTCAGGAACGCCTTTACCACATCCCAGTCTCATGAAGAACTaGACAAATCTGACATTTGTAAACGTTACTGAAGACTTTCACTTC +
Preference number: 5 (lower is better)
Translates to: LGSGTPLPHPSLMKN*TNLTFVNVTEDFHF
Trigger: GAAGTGAAAGTCTTCAGTAACGTTTACAAATGTCAGATTTGTGCAGTTCTTCATGAGACTGGGATGTGGTAAAGGCGTTCCTGACCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681315.1
CDS GCA 90 bp GAAGTCAGTGGGACAAATGGATGGGTTGGCTTGGTAGTTTTTCACTaGAAGACACATCAATCTTTGTGCGCTCCATCTGTCAATGGAAAA +
Preference number: 5 (lower is better)
Translates to: EVSGTNGWVGLVVFH*KTHQSLCAPSVNGK
Trigger: TTTTCCATTGACAGATGGAGCGCACAAAGATTGATGTGTCTTGCAGTGAAAAACTACCAAGCCAACCCATCCATTTGTCCCACTGACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680712.1
CDS GCA 90 bp ACTGTTGCTCTGACATCAGCCAATGACTCATCTGGGCAGGGCTACTaGTGGGACTTGACACTTCATATATCAAAAGGAGGTAGAAAATTT +
Preference number: 5 (lower is better)
Translates to: TVALTSANDSSGQGY*WDLTLHISKGGRKF
Trigger: AAATTTTCTACCTCCTTTTGATATATGAAGTGTCAAGTCCCAGCAGTAGCCCTGCCCAGATGAGTCATTGGCTGATGTCAGAGCAACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS-3UTR CAA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAATGATTGTGCTGACATaGGAAGGGGCTCTAATTTTC +
Preference number: 5 (lower is better)
Translates to: TLECNLSVTQIAFRATGPMIVLT*EGALIF
Trigger: GAAAATTAGAGCCCCTTCCAATGTCAGCACAATCAT...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGCTGGTGGTGGCAAAATaGAACTCGCTGCCTTCATTT +
Preference number: 5 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKLVVAK*NSLPSF
Trigger: AAATGAAGGCAGCGAGTTCAATTTTGCCACCACCAG...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACAAGGATTGGTCCTGTTaGTCTCCAGCGAATCCTGGT +
Preference number: 5 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNKDWSC*SPANPG
Trigger: ACCAGGATTCGCTGGAGACAAACAGGACCAATCCTT...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATCCAGGGTCACACTaGCAACCATGTCTAGTGCAC +
Preference number: 5 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHNPGSH*QPCLVH
Trigger: GTGCACTAGACATGGTTGCAAGTGTGACCCTGGATT...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTGTGCTCAGAACAGATTaGCTCCCCAGTCTCAGTGTG +
Preference number: 5 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIVLRTD*LPSLSV
Trigger: CACACTGAGACTGGGGAGCAAATCTGTTCTGAGCAC...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGGAAGAATGATACGGTaGCCACCATCTGAACTGAAT +
Preference number: 5 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRGRMIR*PPSELN
Trigger: ATTCAGTTCAGATGGTGGCAACCGTATCATTCTTCC...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCACAGGTAAGGCCGTGGTaGGTTGAGTACTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSQVRPW*VEYSSF
Trigger: GAAGCTGGAGTACTCAACCAACCACGGCCTTACCTG...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATCAGGTAAGGCCGTGGTaGGTTGAGTACTCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYQVRPW*VEYSSF
Trigger: GAAGCTGGAGTACTCAACCAACCACGGCCTTACCTG...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAGTGGCATTCAGTGCCTaGGTACCCCTGGTCACACCT +
Preference number: 5 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTVAFSA*VPLVTP
Trigger: AGGTGTGACCAGGGGTACCAAGGCACTGAATGCCAC...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTATCCCCCAATAACTTCTaGCCAGTCAGACTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLSPNNF*PVRLPA
Trigger: GGCTGGGAGTCTGACTGGCAAGAAGTTATTGGGGGA...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAATCCCCCAATAACTTCTaGCCAGTCAGACTCCCAGCC +
Preference number: 5 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKSPNNF*PVRLPA
Trigger: GGCTGGGAGTCTGACTGGCAAGAAGTTATTGGGGGA...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAATGTCTTTTCCCAGCCTaGCTGAAGTACAGAGATGAT +
Preference number: 5 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQCLFPA*LKYRDD
Trigger: ATCATCTCTGTACTTCAGCAAGGCTGGGAAAAGACA...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGCTGCTGTCAGGCTTGTaGCATGAAGCACTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWLLSGL*HEALSP
Trigger: CGGAGAGAGTGCTTCATGCAACAAGCCTGACAGCAG...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAATCTCTGCTGTCAGGCTaGTTGCATGAAGCACTCTCT +
Preference number: 5 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKSLLSG*LHEALS
Trigger: AGAGAGTGCTTCATGCAACAAGCCTGACAGCAGAGA...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAACCATCGAAATGCCGTaGCAGGTGTCTTCGCGTCCT +
Preference number: 5 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKTIEMP*QVSSRP
Trigger: AGGACGCGAAGACACCTGCAACGGCATTTCGATGGT...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCACTTCCCATGTTGCGGTaGCCACCATCGAAATGCCGT +
Preference number: 5 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSLPMLR*PPSKCR
Trigger: ACGGCATTTCGATGGTGGCAACCGCAACATGGGAAG...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGCTTCCCATGTTGCGGTaGCCACCATCGAAATGCCGT +
Preference number: 5 (lower is better)
Translates to: TVTDITTDHNFHGHINMKLPMLR*PPSKCR
Trigger: ACGGCATTTCGATGGTGGCAACCGCAACATGGGAAG...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAATCAACTTGACCTCCTaGGATTCGATACCAGTTGGC +
Preference number: 5 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVINLTS*DSIPVG
Trigger: GCCAACTGGTATCGAATCCAAGGAGGTCAAGTTGAT...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTGAGTTGCTGAAGGGCTaGCTACAGCCCATGCTCATT +
Preference number: 5 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIELLKG*LQPMLI
Trigger: AATGAGCATGGGCTGTAGCAAGCCCTTCAGCAACTC...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAGAGTTGCTGAAGGGCTaGCTACAGCCCATGCTCATT +
Preference number: 5 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEELLKG*LQPMLI
Trigger: AATGAGCATGGGCTGTAGCAAGCCCTTCAGCAACTC...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTTGTACACTGTGGGAGTaGCTGAAGGGCTTGCTACAG +
Preference number: 5 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTICTLWE*LKGLLQ
Trigger: CTGTAGCAAGCCCTTCAGCAACTCCCACAGTGTACA...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATCGCCCCGAAGTCCCTaGAAAATTCCAGTCTCACTG +
Preference number: 5 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYESPRSP*KIPVSL
Trigger: CAGTGAGACTGGAATTTTCAAGGGACTTCGGGGCGA...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGATACATTTGGTTCCATaGATACAGCTCCCCTGTCCA +
Preference number: 5 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRIHLVP*IQLPCP
Trigger: TGGACAGGGGAGCTGTATCAATGGAACCAAATGTAT...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCAGGGTCACATATACATTaGGTTCCATTGATACAGCTC +
Preference number: 5 (lower is better)
Translates to: TLECNLSVTQIAFRATGPGSHIH*VPLIQL
Trigger: GAGCTGTATCAATGGAACCAAATGTATATGTGACCC...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGCTTATTTTACAGGTaGGACCTGAGTAGCCAGGGT +
Preference number: 5 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVCLFYR*DLSSQG
Trigger: ACCCTGGCTACTCAGGTCCAACCTGTAAAATAAGCA...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGCACGAGAGGCCACCGTaGAGAGAATACTGTAGGAGC +
Preference number: 5 (lower is better)
Translates to: TVTDITTDHNFHGHINMKHERPP*REYCRS
Trigger: GCTCCTACAGTATTCTCTCAACGGTGGCCTCTCGTG...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTACGGAAACGAGTGGCTaGGGACCTGGTATAAGGAGG +
Preference number: 5 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSITETSG*GPGIRR
Trigger: CCTCCTTATACCAGGTCCCAAGCCACTCGTTTCCGT...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATACGGAAACGAGTGGCTaGGGACCTGGTATAAGGAGG +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYTETSG*GPGIRR
Trigger: CCTCCTTATACCAGGTCCCAAGCCACTCGTTTCCGT...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGCGATTGAAGTTGTCTTaGAGTTGGGTTGGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRRLKLS*SWVGRE
Trigger: CTCTCTTCCAACCCAACTCAAAGACAACTTCAATCG...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGGAGCTCGATTGAAGTaGTCTTTGAGTTGGGTTGGA +
Preference number: 5 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLGARLK*SLSWVG
Trigger: TCCAACCCAACTCAAAGACAACTTCAATCGAGCTCC...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTACTGGATGGAGCTCGATaGAAGTTGTCTTTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVLDGAR*KLSLSW
Trigger: CCAACTCAAAGACAACTTCAATCGAGCTCCATCCAG...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTCTGGATGGAGCTCGATaGAAGTTGTCTTTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLLDGAR*KLSLSW
Trigger: CCAACTCAAAGACAACTTCAATCGAGCTCCATCCAG...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCCTGAGATGAGGACATaGTCAATGGCCCAGTCGTTC +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIPEMRT*SMAQSF
Trigger: GAACGACTGGGCCATTGACAATGTCCTCATCTCAGG...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAGGGTCAAGTAGCAGTTaGGCCCTGAGTATCCCGGAT +
Preference number: 5 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKGSSSS*ALSIPD
Trigger: ATCCGGGATACTCAGGGCCAAACTGCTACTTGACCC...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGGGGTCAAGTAGCAGTTaGGCCCTGAGTATCCCGGAT +
Preference number: 5 (lower is better)
Translates to: TVTDITTDHNFHGHINMKGSSSS*ALSIPD
Trigger: ATCCGGGATACTCAGGGCCAAACTGCTACTTGACCC...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTGATGCGCCCCCAGTATaGCAGGAACTTTGCACCTCG +
Preference number: 5 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCADAPPV*QELCTS
Trigger: CGAGGTGCAAAGTTCCTGCAATACTGGGGGCGCATC...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTGGCAAGAGGTCATGTaGTTCTCACTACCGATGCGC +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIWQEVM*FSLPMR
Trigger: GCGCATCGGTAGTGAGAACAACATGACCTCTTGCCA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACGAGACCACAATTCCATaGCTGATCACAAAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYETTIP*LITKGC
Trigger: GCAGCCTTTTGTGATCAGCAATGGAATTGTGGTCTC...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTGAGACCACAATTCCATaGCTGATCACAAAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLETTIP*LITKGC
Trigger: GCAGCCTTTTGTGATCAGCAATGGAATTGTGGTCTC...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAAAAAGTGTCCACCAATaGGCTGGGATTGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQKSVHQ*AGIDFC
Trigger: GCAGAAATCAATCCCAGCCAATTGGTGGACACTTTT...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGATGTACACGTGGTCAATaGCCCAGCTTTGCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRCTRGQ*PSFASQ
Trigger: CTGAGAAGCAAAGCTGGGCAATTGACCACGTGTACA...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATATGTACACGTGGTCAATaGCCCAGCTTTGCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIICTRGQ*PSFASQ
Trigger: CTGAGAAGCAAAGCTGGGCAATTGACCACGTGTACA...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGTGTACACGTGGTCAATaGCCCAGCTTTGCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQCTRGQ*PSFASQ
Trigger: CTGAGAAGCAAAGCTGGGCAATTGACCACGTGTACA...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAAGAGCAGTCATCACCTaGGAAGCTCTCGTCGCAGAT +
Preference number: 5 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTRAVIT*EALVAD
Trigger: ATCTGCGACGAGAGCTTCCAAGGTGATGACTGCTCT...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAATCCTATGACTCCACCTaGAATGGTCTCCCAGTTTGC +
Preference number: 5 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKSYDST*NGLPVC
Trigger: GCAAACTGGGAGACCATTCAAGGTGGAGTCATAGGA...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GGAAAGTGGTGTACACTCGGTCTTGAGAAGGGCTTTCAGGTAATCACCAAGTCCCGACATGCTCCCAATTaGCAAAACAAACATGATTTT +
Preference number: 5 (lower is better)
Translates to: GKWCTLGLEKGFQVITKSRHAPN*QNKHDF
Trigger: AAAATCATGTTTGTTTTGCAAATTGGGAGCATGTCG...GGACTTGGTGATTACCTGAAAGCCCTTCTCAAGACCGAGTGTACACCACTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGGTGATCCCGTTGTaGACGCTGTATTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIQVIPL*TLYCSS
Trigger: GCTGCTGCAATACAGCGTCAACAACGGGATCACCTG...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGCAGGTGATCCCGTTGTaGACGCTGTATTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TVTDITTDHNFHGHINMKQVIPL*TLYCSS
Trigger: GCTGCTGCAATACAGCGTCAACAACGGGATCACCTG...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATTGCCAGGTGATCCCGTaGTTGACGCTGTATTGCAGC +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYCQVIP*LTLYCS
Trigger: GCTGCAATACAGCGTCAACAACGGGATCACCTGGCA...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGATGGGCTTTTATAGCTaGGTTCACCCTAGAGTGCAA +
Preference number: 5 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRMGFYS*VHPRVQ
Trigger: TTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS TCA 90 bp TGTCCATGTGTGGGGTGTATTTCTGGCCACATCCCATCACCAAACTaGACTGAATCATATAGGATGCTCCTATCTGCATTGATTGTGTTT +
Preference number: 5 (lower is better)
Translates to: CPCVGCISGHIPSPN*TESYRMLLSALIVF
Trigger: AAACACAATCAATGCAGATAGGAGCATCCTATATGATTCAGTTCAGTTTGGTGATGGGATGTGGCCAGAAATACACCCCACACATGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 90 bp CAGTGCAAGTACTTCCACCTTCTAAGGACATCCATAAGTCAGGTTTaGTTTCTTCACTGTCAAAGCGTTCCTTCAGGAAAGTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: QCKYFHLLRTSISQV*FLHCQSVPSGKSSE
Trigger: CTCTGAAGACTTTCCTGAAGGAACGCTTTGACAGTGAAGAAATCAAACCTGACTTATGGATGTCCTTAGAAGGTGGAAGTACTTGCACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS TCA 90 bp TATGTGGTTTATGAGAGTGAGCCTATCAGTATATTTCAAATTCACTaGGTTTCCTCATGGTCCCAAAGCCTTTTCTCCAGGACGACCTCC +
Preference number: 5 (lower is better)
Translates to: YVVYESEPISIFQIH*VSSWSQSLFSRTTS
Trigger: GGAGGTCGTCCTGGAGAAAAGGCTTTGGGACCATGAGGAAACTCAGTGAATTTGAAATATACTGATAGGCTCACTCTCATAAACCACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429186.2
CDS TCA 90 bp CCAAATGTTATCACATTTGGGCTCACTATACGTAGAAGCATGTGGTaGACATGTAGAAGCATTCTTACCTGGTATAAGGAGGGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: PNVITFGLTIRRSMW*TCRSILTWYKEGEA
Trigger: TGCCTCTCCCTCCTTATACCAGGTAAGAATGCTTCTACATGTTCACCACATGCTTCTACGTATAGTGAGCCCAAATGTGATAACATTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681315.1
CDS GCA 90 bp TATAGAAGATACTTAATCACTGTCCTACCTGCAAATATTAGTGTCTaGCACCTCCAGGAGAGAAATGGACAAAGCGGTAGCCAGGATGAT +
Preference number: 5 (lower is better)
Translates to: YRRYLITVLPANISV*HLQERNGQSGSQDD
Trigger: ATCATCCTGGCTACCGCTTTGTCCATTTCTCTCCTGGAGGTGGCAGACACTAATATTTGCAGGTAGGACAGTGATTAAGTATCTTCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS CCA 90 bp GTTGCTCTGACATCAGCCAATGACTCATCTGGGCAGGGCTACTGCTaGGACTTGACACTTCATATATCAAAAGGAGGTAGAAAATTTATT +
Preference number: 5 (lower is better)
Translates to: VALTSANDSSGQGYC*DLTLHISKGGRKFI
Trigger: AATAAATTTTCTACCTCCTTTTGATATATGAAGTGTCAAGTCCCAGCAGTAGCCCTGCCCAGATGAGTCATTGGCTGATGTCAGAGCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS-3UTR CAA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAATCTGTTGGAGCTCCTaGTTCACACAACTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSICWSS*FTQLLG
Trigger: GCCCAGCAGTTGTGTGAACAAGGAGCTCCAACAGAT...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAATCCGCAGAGTTATTCTaGGCATATAACACGATGATG +
Preference number: 5 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQSAELF*AYNTMM
Trigger: CATCATCGTGTTATATGCCAAGAATAACTCTGCGGA...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGATGATTGTGCTGACATaGGAAGGGGCTCTAATTTTC +
Preference number: 5 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRMIVLT*EGALIF
Trigger: GAAAATTAGAGCCCCTTCCAATGTCAGCACAATCAT...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAACAGGAGCGCCCATGGTaGGTAGAAAATTCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKQERPW*VENSKL
Trigger: CAGCTTGGAATTTTCTACCAACCATGGGCGCTCCTG...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATCAGGAGCGCCCATGGTaGGTAGAAAATTCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYQERPW*VENSKL
Trigger: CAGCTTGGAATTTTCTACCAACCATGGGCGCTCCTG...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAACATGTTTCCAAGGATaGGTCCTGTTTGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKTCFQG*VLFVSS
Trigger: GCTGGAGACAAACAGGACCAATCCTTGGAAACATGT...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTAATCCAGGGTCACACTaGCAACCATGTCTAGTGCAC +
Preference number: 5 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTINPGSH*QPCLVH
Trigger: GTGCACTAGACATGGTTGCAAGTGTGACCCTGGATT...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAATGCTCCTATCTGCATaGATTGTGTTTCCACATAGC +
Preference number: 5 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTMLLSA*IVFPHS
Trigger: GCTATGTGGAAACACAATCAATGCAGATAGGAGCAT...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAATGGAAGGCATTCTTCTaGGACGAGGTGCCAGGTAAG +
Preference number: 5 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKWKAFF*DEVPGK
Trigger: CTTACCTGGCACCTCGTCCAAGAAGAATGCCTTCCA...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGATGGAAGGCATTCTTCTaGGACGAGGTGCCAGGTAAG +
Preference number: 5 (lower is better)
Translates to: IVNTATVTDITTDHNFHGWKAFF*DEVPGK
Trigger: CTTACCTGGCACCTCGTCCAAGAAGAATGCCTTCCA...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAGATGACACCACACCCTaGTTCTGGTTTTACAATTTC +
Preference number: 5 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQDDTTP*FWFYNF
Trigger: GAAATTGTAAAACCAGAACAAGGGTGTGGTGTCATC...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTTGTCTTTTCCCAGCCTaGCTGAAGTACAGAGATGAT +
Preference number: 5 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLCLFPA*LKYRDD
Trigger: ATCATCTCTGTACTTCAGCAAGGCTGGGAAAAGACA...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTCTGCTGTCAGGCTTGTaGCATGAAGCACTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYILLSGL*HEALSP
Trigger: CGGAGAGAGTGCTTCATGCAACAAGCCTGACAGCAG...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATCTCTGCTGTCAGGCTaGTTGCATGAAGCACTCTCT +
Preference number: 5 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYESLLSG*LHEALS
Trigger: AGAGAGTGCTTCATGCAACAAGCCTGACAGCAGAGA...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTTCTCTGCTGTCAGGCTaGTTGCATGAAGCACTCTCT +
Preference number: 5 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTISLLSG*LHEALS
Trigger: AGAGAGTGCTTCATGCAACAAGCCTGACAGCAGAGA...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGTGTGATTGGGGACATTaGACACACAGGTTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQCDWGH*THRFLV
Trigger: CACAAGGAACCTGTGTGTCAAATGTCCCCAATCACA...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTACCATCGAAATGCCGTaGCAGGTGTCTTCGCGTCCT +
Preference number: 5 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCATIEMP*QVSSRP
Trigger: AGGACGCGAAGACACCTGCAACGGCATTTCGATGGT...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTCGATACCAGTTGGCTaGCAAATCTATAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSSIPVG*QIYRAI
Trigger: GATGGCTCTATAGATTTGCAAGCCAACTGGTATCGA...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACATCAACTTGACCTCCTaGGATTCGATACCAGTTGGC +
Preference number: 5 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNINLTS*DSIPVG
Trigger: GCCAACTGGTATCGAATCCAAGGAGGTCAAGTTGAT...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTTGCCAGTCCTTGCCATaGTTCAGAGAATACTGGAGC +
Preference number: 5 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTICQSLP*FREYWS
Trigger: GCTCCAGTATTCTCTGAACAATGGCAAGGACTGGCA...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTTCCGAGGTGTAAATaGAACTTTCCGTGTAATGCA +
Preference number: 5 (lower is better)
Translates to: TLECNLSVTQIAFRATGPFPRCK*NFPCNA
Trigger: TGCATTACACGGAAAGTTCAATTTACACCTCGGAAA...TGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTATACATTTGGTTCCATaGATACAGCTCCCCTGTCCA +
Preference number: 5 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLIHLVP*IQLPCP
Trigger: TGGACAGGGGAGCTGTATCAATGGAACCAAATGTAT...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGATACATTTGGTTCCATaGATACAGCTCCCCTGTCCA +
Preference number: 5 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKIHLVP*IQLPCP
Trigger: TGGACAGGGGAGCTGTATCAATGGAACCAAATGTAT...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTGGGTCACATATACATTaGGTTCCATTGATACAGCTC +
Preference number: 5 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAIGSHIH*VPLIQL
Trigger: GAGCTGTATCAATGGAACCAAATGTATATGTGACCC...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATCGACTGCATTCCACATaGGTAGGCAGACAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYRLHST*VGRQSL
Trigger: AAGGGACTGTCTGCCTACCAATGTGGAATGCAGTCG...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGCGACTGCATTCCACATaGGTAGGCAGACAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWRLHST*VGRQSL
Trigger: AAGGGACTGTCTGCCTACCAATGTGGAATGCAGTCG...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAATTCTAGTCCACTTGTaGAAAGTGTCTGACACCAGG +
Preference number: 5 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVILVHL*KVSDTR
Trigger: CCTGGTGTCAGACACTTTCAACAAGTGGACTAGAAT...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAGTCAAAAGGAGCTGGTaGATGCCAACGGAAACGAGT +
Preference number: 5 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEVKRSW*MPTETS
Trigger: ACTCGTTTCCGTTGGCATCAACCAGCTCCTTTTGAC...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAGAAGTTGTCTTTGAGTaGGGTTGGAAGAGAGGTCTC +
Preference number: 5 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKEVVFE*GWKRGL
Trigger: GAGACCTCTCTTCCAACCCAACTCAAAGACAACTTC...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATGGAGCTCGATTGAAGTaGTCTTTGAGTTGGGTTGGA +
Preference number: 5 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNGARLK*SLSWVG
Trigger: TCCAACCCAACTCAAAGACAACTTCAATCGAGCTCC...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGCCTGAGATGAGGACATaGTCAATGGCCCAGTCGTTC +
Preference number: 5 (lower is better)
Translates to: TVTDITTDHNFHGHINMKPEMRT*SMAQSF
Trigger: GAACGACTGGGCCATTGACAATGTCCTCATCTCAGG...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGCACTTCCAGAGCATTTaGGGTCAGCAGGCAAGCACT +
Preference number: 5 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWHFQSI*GQQAST
Trigger: AGTGCTTGCCTGCTGACCCAAAATGCTCTGGAAGTG...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTACACTTCCAGAGCATTTaGGGTCAGCAGGCAAGCACT +
Preference number: 5 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLHFQSI*GQQAST
Trigger: AGTGCTTGCCTGCTGACCCAAAATGCTCTGGAAGTG...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTATCTTGTGTAACCGCTaGTCTCACAGTGGATCCCCC +
Preference number: 5 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIILCNR*SHSGSP
Trigger: GGGGGATCCACTGTGAGACAAGCGGTTACACAAGAT...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAATCTTGTGTAACCGCTaGTCTCACAGTGGATCCCCC +
Preference number: 5 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSILCNR*SHSGSP
Trigger: GGGGGATCCACTGTGAGACAAGCGGTTACACAAGAT...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGATGGCAAGAGGTCATGTaGTTCTCACTACCGATGCGC +
Preference number: 5 (lower is better)
Translates to: IVNTATVTDITTDHNFHGWQEVM*FSLPMR
Trigger: GCGCATCGGTAGTGAGAACAACATGACCTCTTGCCA...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGACGAAGTCGAGTTGTGTaGGTGAGGGCATCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: IVNTATVTDITTDHNFHGRSRVV*VRASSG
Trigger: TCCTGAAGATGCCCTCACCAACACAACTCGACTTCG...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGCGAAGTCGAGTTGTGTaGGTGAGGGCATCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: TVTDITTDHNFHGHINMKRSRVV*VRASSG
Trigger: TCCTGAAGATGCCCTCACCAACACAACTCGACTTCG...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCAAAAGTGTCCACCAATaGGCTGGGATTGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSKSVHQ*AGIDFC
Trigger: GCAGAAATCAATCCCAGCCAATTGGTGGACACTTTT...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAAAAGTGTCCACCAATaGGCTGGGATTGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYKSVHQ*AGIDFC
Trigger: GCAGAAATCAATCCCAGCCAATTGGTGGACACTTTT...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTTGTACACGTGGTCAATaGCCCAGCTTTGCTTCTCAG +
Preference number: 5 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTICTRGQ*PSFASQ
Trigger: CTGAGAAGCAAAGCTGGGCAATTGACCACGTGTACA...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAAGAGCAGTCATCACCTaGGAAGCTCTCGTCGCAGAT +
Preference number: 5 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSRAVIT*EALVAD
Trigger: ATCTGCGACGAGAGCTTCCAAGGTGATGACTGCTCT...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTAGGCTTGGTAGCTGCTaGCCTGATCTGACAGCCATT +
Preference number: 5 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIRLGSC*PDLTAI
Trigger: AATGGCTGTCAGATCAGGCAAGCAGCTACCAAGCCT...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAAGGCTTGGTAGCTGCTaGCCTGATCTGACAGCCATT +
Preference number: 5 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKRLGSC*PDLTAI
Trigger: AATGGCTGTCAGATCAGGCAAGCAGCTACCAAGCCT...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGGTTGTTGACGCTGTATaGCAGCAGCACTGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWVVDAV*QQHCLV
Trigger: GACAAGGCAGTGCTGCTGCAATACAGCGTCAACAAC...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATGCCAGGTGATCCCGTaGTTGACGCTGTATTGCAGC +
Preference number: 5 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTCQVIP*LTLYCS
Trigger: GCTGCAATACAGCGTCAACAACGGGATCACCTGGCA...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGATGGTCCAAAGCCCATaGATCATGACCTGTTCCATT +
Preference number: 5 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKMVQSP*IMTCSI
Trigger: AATGGAACAGGTCATGATCAATGGGCTTTGGACCAT...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS TCA 90 bp GAATATCTTCTGTGGAAAGATCTACATCCCTGGTGGTGGCAAAATTaGACTCGCTGCCTTCATTTCCATGGAAATAAATGGAGTTCCCAT +
Preference number: 5 (lower is better)
Translates to: EYLLWKDLHPWWWQN*TRCLHFHGNKWSSH
Trigger: ATGGGAACTCCATTTATTTCCATGGAAATGAAGGCAGCGAGTTCAATTTTGCCACCACCAGGGATGTAGATCTTTCCACAGAAGATATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681931.1
CDS TCA 90 bp TCTGTATCCAATGGGCCTATTTTAAACGACTTGTCTGGGCATCTCTaGATTAAGTTGGAGAAGCCAAGTGATGCAGCCACTGTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: SVSNGPILNDLSGHL*IKLEKPSDAATVFF
Trigger: AAAGAAAACAGTGGCTGCATCACTTGGCTTCTCCAACTTAATTCAGAGATGCCCAGACAAGTCGTTTAAAATAGGCCCATTGGATACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681315.1
CDS CCA 90 bp TTTTGCTTCAGAGAAGATCAGAAAGTCAAATCGATTGCTCACATGTaGTTGTTAATAAAACTCCTATGGTGCTGCTCAAGGTGCCCATGG +
Preference number: 5 (lower is better)
Translates to: FCFREDQKVKSIAHM*LLIKLLWCCSRCPW
Trigger: CCATGGGCACCTTGAGCAGCACCATAGGAGTTTTATTAACAACCACATGTGAGCAATCGATTTGACTTTCTGATCTTCTCTGAAGCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473457.2
CDS CCA 90 bp AAATTCCTTCAAATGATCAGAAGTCAGTGGGACAAATGGATGGGTTaGCTTGGTAGTTTTTCACTGCAAGACACATCAATCTTTGTGCGC +
Preference number: 5 (lower is better)
Translates to: KFLQMIRSQWDKWMG*LGSFSLQDTSIFVR
Trigger: GCGCACAAAGATTGATGTGTCTTGCAGTGAAAAACTACCAAGCCAACCCATCCATTTGTCCCACTGACTTCTGATCATTTGAAGGAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680712.1
CDS CCA 90 bp CACTCTCAAACAAGCATGAGAGACTGCTTGTTAAATGCTAAAGGGTaGTTTTCATCTTTATGGTGTGGGGCTTGTCATTCTGTATGTCCA +
Preference number: 5 (lower is better)
Translates to: HSQTSMRDCLLNAKG*FSSLWCGACHSVCP
Trigger: TGGACATACAGAATGACAAGCCCCACACCATAAAGATGAAAACCACCCTTTAGCATTTAACAAGCAGTCTCTCATGCTTGTTTGAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679867.1
CDS-3UTR CAA 90 bp CCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTTCTCCAGTCTCACAGTaGTTACATTCAACCCATATA +
Preference number: 5 (lower is better)
Translates to: PRVQPFSYTNSIQSYRAISPVSQ*LHSTHI
Trigger: TATATGGGTTGAATGTAACAACTGTGAGACTGGAGA...AATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACTTCCTCTCTCCATCTTaGAGGAAGACCATTGATAAG +
Preference number: 5 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYFLSPS*RKTIDK
Trigger: CTTATCAATGGTCTTCCTCAAAGATGGAGAGAGGAA...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTCAGGAGCGCCCATGGTaGGTAGAAAATTCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIQERPW*VENSKL
Trigger: CAGCTTGGAATTTTCTACCAACCATGGGCGCTCCTG...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATAATCCAGGGTCACACTaGCAACCATGTCTAGTGCAC +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYNPGSH*QPCLVH
Trigger: GTGCACTAGACATGGTTGCAAGTGTGACCCTGGATT...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCGAATTCCAAACTGCTTaGCATCACCTGGTAGTTCTA +
Preference number: 5 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSEFQTA*HHLVVL
Trigger: TAGAACTACCAGGTGATGCAAAGCAGTTTGGAATTC...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGGAAGAATGATACGGTaGCCACCATCTGAACTGAAT +
Preference number: 5 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRGRMIR*PPSELN
Trigger: ATTCAGTTCAGATGGTGGCAACCGTATCATTCTTCC...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATGGAAGGCATTCTTCTaGGACGAGGTGCCAGGTAAG +
Preference number: 5 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTWKAFF*DEVPGK
Trigger: CTTACCTGGCACCTCGTCCAAGAAGAATGCCTTCCA...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGCAAAGCCCACTCGTCTaGAGCTGTGTAATAGCTCTG +
Preference number: 5 (lower is better)
Translates to: TVTDITTDHNFHGHINMKQSPLV*SCVIAL
Trigger: CAGAGCTATTACACAGCTCAAGACGAGTGGGCTTTG...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAGATGACACCACACCCTaGTTCTGGTTTTACAATTTC +
Preference number: 5 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVDDTTP*FWFYNF
Trigger: GAAATTGTAAAACCAGAACAAGGGTGTGGTGTCATC...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTGATGACACCACACCCTaGTTCTGGTTTTACAATTTC +
Preference number: 5 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSDDTTP*FWFYNF
Trigger: GAAATTGTAAAACCAGAACAAGGGTGTGGTGTCATC...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGCAACCTATGTTTAGCTaGAACTGTAGCACATATCCA +
Preference number: 5 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRQPMFS*NCSTYP
Trigger: TGGATATGTGCTACAGTTCAAGCTAAACATAGGTTG...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTAGCAGTACTGCTGAATaGATTGGCACAACCTATGTT +
Preference number: 5 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLSSTAE*IGTTYV
Trigger: AACATAGGTTGTGCCAATCAATTCAGCAGTACTGCT...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATATCGATACCAGTTGGCTaGCAAATCTATAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIISIPVG*QIYRAI
Trigger: GATGGCTCTATAGATTTGCAAGCCAACTGGTATCGA...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGATCGATACCAGTTGGCTaGCAAATCTATAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRSIPVG*QIYRAI
Trigger: GATGGCTCTATAGATTTGCAAGCCAACTGGTATCGA...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGTGGATTCGATACCAGTaGGCTTGCAAATCTATAGAG +
Preference number: 5 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKWIRYQ*ACKSIE
Trigger: CTCTATAGATTTGCAAGCCAACTGGTATCGAATCCA...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTTGTACACTGTGGGAGTaGCTGAAGGGCTTGCTACAG +
Preference number: 5 (lower is better)
Translates to: DITTDHNFHGHINMKTFTCTLWE*LKGLLQ
Trigger: CTGTAGCAAGCCCTTCAGCAACTCCCACAGTGTACA...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTTGTACACTGTGGGAGTaGCTGAAGGGCTTGCTACAG +
Preference number: 5 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYICTLWE*LKGLLQ
Trigger: CTGTAGCAAGCCCTTCAGCAACTCCCACAGTGTACA...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGACAAGATGCCAGTCCTaGCCATTGTTCAGAGAATAC +
Preference number: 5 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQTRCQS*PLFREY
Trigger: GTATTCTCTGAACAATGGCAAGGACTGGCATCTTGT...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGTTTCCGAGGTGTAAATaGAACTTTCCGTGTAATGCA +
Preference number: 5 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRFPRCK*NFPCNA
Trigger: TGCATTACACGGAAAGTTCAATTTACACCTCGGAAA...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTTCTTGTAGCATTGGTTaGGGCAGTGTATGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSISCSIG*GSVWQG
Trigger: CCCTTGCCATACACTGCCCAAACCAATGCTACAAGA...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTTGTAGCATTGGTTaGGGCAGTGTATGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSSCSIG*GSVWQG
Trigger: CCCTTGCCATACACTGCCCAAACCAATGCTACAAGA...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCTGAATCTTGTAGCATaGGTTTGGGCAGTGTATGGC +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFILNLVA*VWAVYG
Trigger: GCCATACACTGCCCAAACCAATGCTACAAGATTCAG...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTTCGCCCCGAAGTCCCTaGAAAATTCCAGTCTCACTG +
Preference number: 5 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCASPRSP*KIPVSL
Trigger: CAGTGAGACTGGAATTTTCAAGGGACTTCGGGGCGA...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACACGACTGCATTCCACATaGGTAGGCAGACAGTCCCTT +
Preference number: 5 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTRLHST*VGRQSL
Trigger: AAGGGACTGTCTGCCTACCAATGTGGAATGCAGTCG...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAGTGATTCTAGTCCACTaGTTGAAAGTGTCTGACACC +
Preference number: 5 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKVILVH*LKVSDT
Trigger: GGTGTCAGACACTTTCAACAAGTGGACTAGAATCAC...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTGTCAAAAGGAGCTGGTaGATGCCAACGGAAACGAGT +
Preference number: 5 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPVKRSW*MPTETS
Trigger: ACTCGTTTCCGTTGGCATCAACCAGCTCCTTTTGAC...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACATATAGACATTATCTATaGCCCATGTCTGCTGCTTGT +
Preference number: 5 (lower is better)
Translates to: SMGFYSLVHPRVQPFSYTYRHYL*PMSAAC
Trigger: ACAAGCAGCAGACATGGGCAATAGATAATGTCTATA...TGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAATATAGACATTATCTATaGCCCATGTCTGCTGCTTGT +
Preference number: 5 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQYRHYL*PMSAAC
Trigger: ACAAGCAGCAGACATGGGCAATAGATAATGTCTATA...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCTGGATGGAGCTCGATaGAAGTTGTCTTTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFILDGAR*KLSLSW
Trigger: CCAACTCAAAGACAACTTCAATCGAGCTCCATCCAG...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCACACCTTGGTTACGGTaGTTTGGTGTAATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFITPWLR*FGVIRH
Trigger: GTGCCTGATTACACCAAACAACCGTAACCAAGGTGT...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCCAAGAGAACACCTaGGTTACGGTTGTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNFQENT*VTVVWC
Trigger: ACACCAAACAACCGTAACCAAGGTGTTCTCTTGGAA...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACCAGGTAATGCCTCCATaGACAGAATATTCCAAGAGA +
Preference number: 5 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYQVMPP*TEYSKR
Trigger: TCTCTTGGAATATTCTGTCAATGGAGGCATTACCTG...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCCATCCAACTGAGATCTaGAATTGCATAATCCAGCCT +
Preference number: 5 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSHPTEI*NCIIQP
Trigger: AGGCTGGATTATGCAATTCAAGATCTCAGTTGGATG...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTCATCCAACTGAGATCTaGAATTGCATAATCCAGCCT +
Preference number: 5 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLHPTEI*NCIIQP
Trigger: AGGCTGGATTATGCAATTCAAGATCTCAGTTGGATG...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCAGTATTGCAGGAACTTaGCACCTCGAAGATCCAAAT +
Preference number: 5 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSSIAGT*HLEDPN
Trigger: ATTTGGATCTTCGAGGTGCAAAGTTCCTGCAATACT...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTAGTATTGCAGGAACTTaGCACCTCGAAGATCCAAAT +
Preference number: 5 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSSIAGT*HLEDPN
Trigger: ATTTGGATCTTCGAGGTGCAAAGTTCCTGCAATACT...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATGGCAAGAGGTCATGTaGTTCTCACTACCGATGCGC +
Preference number: 5 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTWQEVM*FSLPMR
Trigger: GCGCATCGGTAGTGAGAACAACATGACCTCTTGCCA...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTCGAAGTCGAGTTGTGTaGGTGAGGGCATCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIRSRVV*VRASSG
Trigger: TCCTGAAGATGCCCTCACCAACACAACTCGACTTCG...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAGAGACCACAATTCCATaGCTGATCACAAAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTETTIP*LITKGC
Trigger: GCAGCCTTTTGTGATCAGCAATGGAATTGTGGTCTC...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAAAAGTGTCCACCAATaGGCTGGGATTGATTTCTGC +
Preference number: 5 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHKSVHQ*AGIDFC
Trigger: GCAGAAATCAATCCCAGCCAATTGGTGGACACTTTT...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTATCCTATGACTCCACCTaGAATGGTCTCCCAGTTTGC +
Preference number: 5 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLSYDST*NGLPVC
Trigger: GCAAACTGGGAGACCATTCAAGGTGGAGTCATAGGA...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTAGGCTTGGTAGCTGCTaGCCTGATCTGACAGCCATT +
Preference number: 5 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIRLGSC*PDLTAI
Trigger: AATGGCTGTCAGATCAGGCAAGCAGCTACCAAGCCT...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAATGGTCCAAAGCCCATaGATCATGACCTGTTCCATT +
Preference number: 5 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIMVQSP*IMTCSI
Trigger: AATGGAACAGGTCATGATCAATGGGCTTTGGACCAT...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CAA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACATGGTCCAAAGCCCATaGATCATGACCTGTTCCATT +
Preference number: 5 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHMVQSP*IMTCSI
Trigger: AATGGAACAGGTCATGATCAATGGGCTTTGGACCAT...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CAA 90 bp GGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCGAAATGGGAACTTATTaGTGGGAGATAGGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: GFYSLVHPRVQPFSYTNSEMGTY*WEIGSS
Trigger: TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTC...GCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CAA 90 bp GCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAATGTTGCTGGTGTaGTACAACTTCATCAGAAGG +
Preference number: 5 (lower is better)
Translates to: AWAFIAWFTLECNLSVTQIMLLV*YNFIRR
Trigger: CCTTCTGATGAAGTTGTACAACACCAGCAACATTAT...TTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CAA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTaGCTGGTGTTGTACAACTTC +
Preference number: 5 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYRAIIM*LVLYNF
Trigger: GAAGTTGTACAACACCAGCAACATTATAATGGCCCT...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CAA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACATTTTCATCTCTCTCCTaGCCAACCACTTGGAGCCAT +
Preference number: 5 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTFSSLS*PTTWSH
Trigger: ATGGCTCCAAGTGGTTGGCAAGGAGAGAGATGAAAA...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681034.1
CDS TCA 90 bp GTGAATATCAGAGCAGTATCCATAGAGAGACAGTCAATATCAACTTaGCCTCCTTGGATTCGATACCAGTTGGCTTGCAAATCTATAGAG +
Preference number: 5 (lower is better)
Translates to: VNIRAVSIERQSIST*PPWIRYQLACKSIE
Trigger: CTCTATAGATTTGCAAGCCAACTGGTATCGAATCCAAGGAGGTCAAGTTGATATTGACTGTCTCTCTATGGATACTGCTCTGATATTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 90 bp CCAGGGTATACTCTCTGTTGTTTCATAACCAAGACAACTCCTTTTTaGTTCAGAGAAGATCAGAAAGTCAAATCGATTGCTCACATGTGG +
Preference number: 5 (lower is better)
Translates to: PGYTLCCFITKTTPF*FREDQKVKSIAHMW
Trigger: CCACATGTGAGCAATCGATTTGACTTTCTGATCTTCTCTGAAGCAAAAAGGAGTTGTCTTGGTTATGAAACAACAGAGAGTATACCCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473457.2
CDS CCA 90 bp AAAGACCGATGTTACCACCAGGATAGAAAAACCAATTGTCTTCTCTaGGCCCAAAATCAAATGTATCCAAGAGCATCACAGGGTTGTTTA +
Preference number: 5 (lower is better)
Translates to: KDRCYHQDRKTNCLL*AQNQMYPRASQGCL
Trigger: TAAACAACCCTGTGATGCTCTTGGATACATTTGATTTTGGGCCCAGAGAAGACAATTGGTTTTTCTATCCTGGTGGTAACATCGGTCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000681034.1
ENST00000681199.1
CDS CCA 90 bp GTGAGTCTTGTCCTTCTTTTTATTTGGCCAATAGAGGTGAAAGGATaGATTGCCACAAAATCCTGCTGTCCTTACAGCATTAGGGTAAAA +
Preference number: 5 (lower is better)
Translates to: VSLVLLFIWPIEVKG*IATKSCCPYSIRVK
Trigger: TTTTACCCTAATGCTGTAAGGACAGCAGGATTTTGTGGCAATCCATCCTTTCACCTCTATTGGCCAAATAAAAAGAAGGACAAGACTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CCA 90 bp GCTCCTGAATGTTTACTTGTTCCTTGGATTCAGCTCATAAAGAGTTaGACTGGAATTGACATGTCTCAATTCCTAACTCCCATGCTAGTA +
Preference number: 5 (lower is better)
Translates to: APECLLVPWIQLIKS*TGIDMSQFLTPMLV
Trigger: TACTAGCATGGGAGTTAGGAATTGAGACATGTCAATTCCAGTCCAACTCTTTATGAGCTGAATCCAAGGAACAAGTAAACATTCAGGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS-3UTR CAA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTATGTCACATGGTATTCTaGTCCCGGAACGTAGTAGGT +
Preference number: 5 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLCHMVF*SRNVVG
Trigger: ACCTACTACGTTCCGGGACAAGAATACCATGTGACA...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGTGCTTGTTGAAATaGTCACATGGTATTCTTGTC +
Preference number: 5 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYRCLLK*SHGILV
Trigger: GACAAGAATACCATGTGACAATTTCAACAAGCACCT...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTTCTCCAGTCTCACAGTaGTTACATTCAACCCATATA +
Preference number: 5 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLSPVSQ*LHSTHI
Trigger: TATATGGGTTGAATGTAACAACTGTGAGACTGGAGA...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACAAATAGCATTCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTCCGCAGAGTTATTCTaGGCATATAACACGATGATG +
Preference number: 5 (lower is better)
Translates to: TNSIQSYRAIIMLLVLYNSAELF*AYNTMM
Trigger: CATCATCGTGTTATATGCCAAGAATAACTCTGCGGA...GTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGAATGCTATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTCTGGTGGTGGCAAAATaGAACTCGCTGCCTTCATTT +
Preference number: 5 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPLVVAK*NSLPSF
Trigger: AAATGAAGGCAGCGAGTTCAATTTTGCCACCACCAG...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGCTGGTGGTGGCAAAATaGAACTCGCTGCCTTCATTT +
Preference number: 5 (lower is better)
Translates to: TVTDITTDHNFHGHINMKLVVAK*NSLPSF
Trigger: AAATGAAGGCAGCGAGTTCAATTTTGCCACCACCAG...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTAATTCCTATTATGTCCTaGATGGTTCTTTTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVIPIMS*MVLLPE
Trigger: CTCAGGCAAAAGAACCATCAAGGACATAATAGGAAT...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGATTCCTATTATGTCCTaGATGGTTCTTTTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: SELQGHYNVAGVVQLHQKIPIMS*MVLLPE
Trigger: CTCAGGCAAAAGAACCATCAAGGACATAATAGGAAT...CTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAAGTTCCACATCCCAGATaGATGGAAAACTGTATCATG +
Preference number: 5 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKVPHPR*MENCIM
Trigger: CATGATACAGTTTTCCATCAATCTGGGATGTGGAAC...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAAAGGATTGGTCCTGTTaGTCTCCAGCGAATCCTGGT +
Preference number: 5 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTKDWSC*SPANPG
Trigger: ACCAGGATTCGCTGGAGACAAACAGGACCAATCCTT...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCTGCCAGAACAGAATTaGAGACATGACGGGCCAATA +
Preference number: 5 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSILPEQN*RHDGPI
Trigger: TATTGGCCCGTCATGTCTCAAATTCTGTTCTGGCAG...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCACTGCCAGAACAGAATTaGAGACATGACGGGCCAATA +
Preference number: 5 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSLPEQN*RHDGPI
Trigger: TATTGGCCCGTCATGTCTCAAATTCTGTTCTGGCAG...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTACTGCCAGAACAGAATTaGAGACATGACGGGCCAATA +
Preference number: 5 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLLPEQN*RHDGPI
Trigger: TATTGGCCCGTCATGTCTCAAATTCTGTTCTGGCAG...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GAGCTACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATCAAGACTAATGCTGTaGAAAAGCACAGATGTCATG +
Preference number: 5 (lower is better)
Translates to: ELQGHYNVAGVVQLHQKVSRLML*KSTDVM
Trigger: CATGACATCTGTGCTTTTCAACAGCATTAGTCTTGA...TACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTTCAAGACTAATGCTGTaGAAAAGCACAGATGTCATG +
Preference number: 5 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLSRLML*KSTDVM
Trigger: CATGACATCTGTGCTTTTCAACAGCATTAGTCTTGA...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAAGACAACTTGGCATACTaGGAAGGCATTCTTCTTGGA +
Preference number: 5 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYEDNLAY*EGILLG
Trigger: TCCAAGAAGAATGCCTTCCAAGTATGCCAAGTTGTC...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACACAAAGCCCACTCGTCTaGAGCTGTGTAATAGCTCTG +
Preference number: 5 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTQSPLV*SCVIAL
Trigger: CAGAGCTATTACACAGCTCAAGACGAGTGGGCTTTG...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAATTTTCCAAATATCATaGCTGATGGTGTGGCAGCAC +
Preference number: 5 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRIFQIS*LMVWQH
Trigger: GTGCTGCCACACCATCAGCAATGATATTTGGAAAAT...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTTCAACCTATGTTTAGCTaGAACTGTAGCACATATCCA +
Preference number: 5 (lower is better)
Translates to: ISHLSLVHSVGKWCTLGLQPMFS*NCSTYP
Trigger: TGGATATGTGCTACAGTTCAAGCTAAACATAGGTTG...AAGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATTGTGATTGGGGACATTaGACACACAGGTTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYCDWGH*THRFLV
Trigger: CACAAGGAACCTGTGTGTCAAATGTCCCCAATCACA...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACTTTCTAGTTCTTGGTTaGATGCAGGTAATGCCTGAA +
Preference number: 5 (lower is better)
Translates to: LVHPRVQPFSYTNSIQSYFLVLG*MQVMPE
Trigger: TTCAGGCATTACCTGCATCAAACCAAGAACTAGAAA...GTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACATCGATACCAGTTGGCTaGCAAATCTATAGAGCCATC +
Preference number: 5 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTSIPVG*QIYRAI
Trigger: GATGGCTCTATAGATTTGCAAGCCAACTGGTATCGA...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAATCAACTTGACCTCCTaGGATTCGATACCAGTTGGC +
Preference number: 5 (lower is better)
Translates to: IVNTATVTDITTDHNFHGINLTS*DSIPVG
Trigger: GCCAACTGGTATCGAATCCAAGGAGGTCAAGTTGAT...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATATCAACTTGACCTCCTaGGATTCGATACCAGTTGGC +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYINLTS*DSIPVG
Trigger: GCCAACTGGTATCGAATCCAAGGAGGTCAAGTTGAT...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTTGCCAGTCCTTGCCATaGTTCAGAGAATACTGGAGC +
Preference number: 5 (lower is better)
Translates to: DITTDHNFHGHINMKTFTCQSLP*FREYWS
Trigger: GCTCCAGTATTCTCTGAACAATGGCAAGGACTGGCA...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATGCCAGTCCTTGCCATaGTTCAGAGAATACTGGAGC +
Preference number: 5 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTCQSLP*FREYWS
Trigger: GCTCCAGTATTCTCTGAACAATGGCAAGGACTGGCA...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTCTGAATCTTGTAGCATaGGTTTGGGCAGTGTATGGC +
Preference number: 5 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPLNLVA*VWAVYG
Trigger: GCCATACACTGCCCAAACCAATGCTACAAGATTCAG...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTACCGTTATTATAAGGTaGCCAGAGTCTGAATCTTGT +
Preference number: 5 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSTVIIR*PESESC
Trigger: ACAAGATTCAGACTCTGGCAACCTTATAATAACGGT...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATACTTCAGGTGCCCCCTTaGAAGAATATGGACAATAAA +
Preference number: 5 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIILQVPP*KNMDNK
Trigger: TTTATTGTCCATATTCTTCAAAGGGGGCACCTGAAG...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATGTCGAACAGCCAACGTaGATCTCAAATTGTATGATG +
Preference number: 5 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNVEQPT*ISNCMM
Trigger: CATCATACAATTTGAGATCAACGTTGGCTGTTCGAC...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGATGTACCTGCCCACATaGCTGGAATTGCTGAAAAGG +
Preference number: 5 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWMYLPT*LELLKR
Trigger: CCTTTTCAGCAATTCCAGCAATGTGGGCAGGTACAT...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAATGTACCTGCCCACATaGCTGGAATTGCTGAAAAGG +
Preference number: 5 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSMYLPT*LELLKR
Trigger: CCTTTTCAGCAATTCCAGCAATGTGGGCAGGTACAT...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATATGTACCTGCCCACATaGCTGGAATTGCTGAAAAGG +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYMYLPT*LELLKR
Trigger: CCTTTTCAGCAATTCCAGCAATGTGGGCAGGTACAT...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCGTGATTCTAGTCCACTaGTTGAAAGTGTCTGACACC +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIVILVH*LKVSDT
Trigger: GGTGTCAGACACTTTCAACAAGTGGACTAGAATCAC...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTGTCAAAAGGAGCTGGTaGATGCCAACGGAAACGAGT +
Preference number: 5 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIVKRSW*MPTETS
Trigger: ACTCGTTTCCGTTGGCATCAACCAGCTCCTTTTGAC...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAGGAGCTCGATTGAAGTaGTCTTTGAGTTGGGTTGGA +
Preference number: 5 (lower is better)
Translates to: IVNTATVTDITTDHNFHGGARLK*SLSWVG
Trigger: TCCAACCCAACTCAAAGACAACTTCAATCGAGCTCC...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAGGAGCTCGATTGAAGTaGTCTTTGAGTTGGGTTGGA +
Preference number: 5 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKGARLK*SLSWVG
Trigger: TCCAACCCAACTCAAAGACAACTTCAATCGAGCTCC...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAACACCTTGGTTACGGTaGTTTGGTGTAATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLTPWLR*FGVIRH
Trigger: GTGCCTGATTACACCAAACAACCGTAACCAAGGTGT...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAACACCTTGGTTACGGTaGTTTGGTGTAATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKTPWLR*FGVIRH
Trigger: GTGCCTGATTACACCAAACAACCGTAACCAAGGTGT...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGCAGAAAACAGGTAATGCCTCCATaGACAGAATATTCCAAGAGA +
Preference number: 5 (lower is better)
Translates to: CCWCCTTSSEGMNMTRRKQVMPP*TEYSKR
Trigger: TCTCTTGGAATATTCTGTCAATGGAGGCATTACCTG...TTTTCTGCGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATCATCCAACTGAGATCTaGAATTGCATAATCCAGCCT +
Preference number: 5 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNHPTEI*NCIIQP
Trigger: AGGCTGGATTATGCAATTCAAGATCTCAGTTGGATG...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCGGTAGAAATTATCGATaGCCCACTGCATGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIGRNYR*PTACLS
Trigger: ACTCAGACATGCAGTGGGCAATCGATAATTTCTACC...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTCGAAGATCCAAATCTaGTGTAACCGCTTGTCTCAC +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFISKIQI*CNRLSH
Trigger: GTGAGACAAGCGGTTACACAAGATTTGGATCTTCGA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACATCGAAGATCCAAATCTaGTGTAACCGCTTGTCTCAC +
Preference number: 5 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTSKIQI*CNRLSH
Trigger: GTGAGACAAGCGGTTACACAAGATTTGGATCTTCGA...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAACCAATTGGCTGGGATaGATTTCTGCTCCACCAATC +
Preference number: 5 (lower is better)
Translates to: IVNTATVTDITTDHNFHGTNWLG*ISAPPI
Trigger: GATTGGTGGAGCAGAAATCAATCCCAGCCAATTGGT...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGCGACATGCTCCCAATTaGCAAAACAAACATGATTTT +
Preference number: 5 (lower is better)
Translates to: VHPRVQPFSYTNSIQSYRRHAPN*QNKHDF
Trigger: AAAATCATGTTTGTTTTGCAAATTGGGAGCATGTCG...CCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATGAAATGGGAACTTATTaGTGGGAGATAGGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNEMGTY*WEIGSS
Trigger: TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTC...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCATGGGCTTTTATAGCTaGGTTCACCCTAGAGTGCAA +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIMGFYS*VHPRVQ
Trigger: TTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS TCA 90 bp TCTGAGCCACAGAACAGGCTAAGCAATTTTAATCTTCAGAGGTTTTaGGCCACGGATGAATATCTAAGGAATGTGGTGGTCTTATTTCTT +
Preference number: 5 (lower is better)
Translates to: SEPQNRLSNFNLQRF*ATDEYLRNVVVLFL
Trigger: AAGAAATAAGACCACCACATTCCTTAGATATTCATCCGTGGCTCAAAACCTCTGAAGATTAAAATTGCTTAGCCTGTTCTGTGGCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS TCA 90 bp ACTGAATTAAGGGTCATGCTATATCAAAGGAATTTCAAACCTTCCTaGAATGGACATGGGATGCCATGTAATAGATACTCACAGGACGAC +
Preference number: 5 (lower is better)
Translates to: TELRVMLYQRNFKPS*NGHGMPCNRYSQDD
Trigger: GTCGTCCTGTGAGTATCTATTACATGGCATCCCATGTCCATTTCAGGAAGGTTTGAAATTCCTTTGATATAGCATGACCCTTAATTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS GCA 90 bp ATGATGGTGTTCTCATTCACATTTAGGTCACGGGTGGTAATGGAATaGTCACCAACTTCATTTGAAACAAACACCATAGCTGAATCTTCT +
Preference number: 5 (lower is better)
Translates to: MMVFSFTFRSRVVME*SPTSFETNTIAESS
Trigger: AGAAGATTCAGCTATGGTGTTTGTTTCAAATGAAGTTGGTGAGCATTCCATTACCACCCGTGACCTAAATGTGAATGAGAACACCATCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000681034.1
ENST00000681199.1
CDS GCA 90 bp GACAACTCCTTTTTGCTTCAGAGAAGATCAGAAAGTCAAATCGATTaGTCACATGTGGTTGTTAATAAAACTCCTATGGTGCTGCTCAAG +
Preference number: 5 (lower is better)
Translates to: DNSFLLQRRSESQID*SHVVVNKTPMVLLK
Trigger: CTTGAGCAGCACCATAGGAGTTTTATTAACAACCACATGTGAGCAATCGATTTGACTTTCTGATCTTCTCTGAAGCAAAAAGGAGTTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473457.2
CDS GCA 90 bp CTGAATTGGAGTTCCGTGGTCATGATGCAATTTAGATTCACTAATTaGATTTCTGAAATTGTACAGAAGGTGAGTGACGCCTTTGACAAG +
Preference number: 5 (lower is better)
Translates to: LNWSSVVMMQFRFTN*ISEIVQKVSDAFDK
Trigger: CTTGTCAAAGGCGTCACTCACCTTCTGTACAATTTCAGAAATGCAATTAGTGAATCTAAATTGCATCATGACCACGGAACTCCAATTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681921.1
CDS GCA 90 bp AATATGAGAGTGGGAAGATTACACTCTCAAACAAGCATGAGAGACTaGTTGTTAAATGCTAAAGGGTGGTTTTCATCTTTATGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: NMRVGRLHSQTSMRD*LLNAKGWFSSLWCG
Trigger: CCCACACCATAAAGATGAAAACCACCCTTTAGCATTTAACAAGCAGTCTCTCATGCTTGTTTGAGAGTGTAATCTTCCCACTCTCATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679867.1
CDS CCA 90 bp TCCATTGACAGAATATTCCAAGAGAACACCTTGGTTACGGTTGTTTaGTGTAATCAGGCACCCATACATGAAGTAAAATTGGATGAACTC +
Preference number: 5 (lower is better)
Translates to: SIDRIFQENTLVTVV*CNQAPIHEVKLDEL
Trigger: GAGTTCATCCAATTTTACTTCATGTATGGGTGCCTGATTACACCAAACAACCGTAACCAAGGTGTTCTCTTGGAATATTCTGTCAATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS-3UTR CAA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTTCCGCAGAGTTATTCTaGGCATATAACACGATGATG +
Preference number: 5 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTISAELF*AYNTMM
Trigger: CATCATCGTGTTATATGCCAAGAATAACTCTGCGGA...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACACTGGTGGTGGCAAAATaGAACTCGCTGCCTTCATTT +
Preference number: 5 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTLVVAK*NSLPSF
Trigger: AAATGAAGGCAGCGAGTTCAATTTTGCCACCACCAG...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTTCCTCTCTCCATCTTaGAGGAAGACCATTGATAAG +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIFLSPS*RKTIDK
Trigger: CTTATCAATGGTCTTCCTCAAAGATGGAGAGAGGAA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGTCCTTGATGGTTCTTTaGCCTGAGACAAAATTTGGT +
Preference number: 5 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQSLMVL*PETKFG
Trigger: ACCAAATTTTGTCTCAGGCAAAAGAACCATCAAGGA...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACTCCTTGATGGTTCTTTaGCCTGAGACAAAATTTGGT +
Preference number: 5 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHSLMVL*PETKFG
Trigger: ACCAAATTTTGTCTCAGGCAAAAGAACCATCAAGGA...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAACATGTTTCCAAGGATaGGTCCTGTTTGTCTCCAGC +
Preference number: 5 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTTCFQG*VLFVSS
Trigger: GCTGGAGACAAACAGGACCAATCCTTGGAAACATGT...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTGGAAGAATGATACGGTaGCCACCATCTGAACTGAAT +
Preference number: 5 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIGRMIR*PPSELN
Trigger: ATTCAGTTCAGATGGTGGCAACCGTATCATTCTTCC...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAGGAAGAATGATACGGTaGCCACCATCTGAACTGAAT +
Preference number: 5 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSGRMIR*PPSELN
Trigger: ATTCAGTTCAGATGGTGGCAACCGTATCATTCTTCC...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGATCAAGACTAATGCTGTaGAAAAGCACAGATGTCATG +
Preference number: 5 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRSRLML*KSTDVM
Trigger: CATGACATCTGTGCTTTTCAACAGCATTAGTCTTGA...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTATGTCTTTTCCCAGCCTaGCTGAAGTACAGAGATGAT +
Preference number: 5 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLCLFPA*LKYRDD
Trigger: ATCATCTCTGTACTTCAGCAAGGCTGGGAAAAGACA...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAATTTTCCAAATATCATaGCTGATGGTGTGGCAGCAC +
Preference number: 5 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTIFQIS*LMVWQH
Trigger: GTGCTGCCACACCATCAGCAATGATATTTGGAAAAT...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGCAACCTATGTTTAGCTaGAACTGTAGCACATATCCA +
Preference number: 5 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQQPMFS*NCSTYP
Trigger: TGGATATGTGCTACAGTTCAAGCTAAACATAGGTTG...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TCAGGTAATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGACAACCTATGTTTAGCTaGAACTGTAGCACATATCCA +
Preference number: 5 (lower is better)
Translates to: SGNHQVLHRYFLISDVVRQPMFS*NCSTYP
Trigger: TGGATATGTGCTACAGTTCAAGCTAAACATAGGTTG...TCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATTACCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAAGCAGTACTGCTGAATaGATTGGCACAACCTATGTT +
Preference number: 5 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTSSTAE*IGTTYV
Trigger: AACATAGGTTGTGCCAATCAATTCAGCAGTACTGCT...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTTGTGATTGGGGACATTaGACACACAGGTTCCTTGTG +
Preference number: 5 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYICDWGH*THRFLV
Trigger: CACAAGGAACCTGTGTGTCAAATGTCCCCAATCACA...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATATTTCTAGTTCTTGGTTaGATGCAGGTAATGCCTGAA +
Preference number: 5 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIIFLVLG*MQVMPE
Trigger: TTCAGGCATTACCTGCATCAAACCAAGAACTAGAAA...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACAATTTGGATTCGATACCAGTaGGCTTGCAAATCTATAGAG +
Preference number: 5 (lower is better)
Translates to: LDKEMGTYLWEIGSSSTIWIRYQ*ACKSIE
Trigger: CTCTATAGATTTGCAAGCCAACTGGTATCGAATCCA...AATTGTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTGGATTCGATACCAGTaGGCTTGCAAATCTATAGAG +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIWIRYQ*ACKSIE
Trigger: CTCTATAGATTTGCAAGCCAACTGGTATCGAATCCA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCCACACAGTCAATATCAACTaGACCTCCTTGGATTCGATA +
Preference number: 5 (lower is better)
Translates to: IFRQGNGNLFVGDRVFIHTVNIN*TSLDSI
Trigger: TATCGAATCCAAGGAGGTCAAGTTGATATTGACTGT...GTGGATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGAGCTACAGGGCCATTATAACAGTCAATATCAACTaGACCTCCTTGGATTCGATA +
Preference number: 5 (lower is better)
Translates to: RVQPFSYTNSIQSYRAIITVNIN*TSLDSI
Trigger: TATCGAATCCAAGGAGGTCAAGTTGATATTGACTGT...TATAATGGCCCTGTAGCTCTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAACAAGATGCCAGTCCTaGCCATTGTTCAGAGAATAC +
Preference number: 5 (lower is better)
Translates to: IVNTATVTDITTDHNFHGTRCQS*PLFREY
Trigger: GTATTCTCTGAACAATGGCAAGGACTGGCATCTTGT...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAACAAGATGCCAGTCCTaGCCATTGTTCAGAGAATAC +
Preference number: 5 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSTRCQS*PLFREY
Trigger: GTATTCTCTGAACAATGGCAAGGACTGGCATCTTGT...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTCTGAATCTTGTAGCATaGGTTTGGGCAGTGTATGGC +
Preference number: 5 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYILNLVA*VWAVYG
Trigger: GCCATACACTGCCCAAACCAATGCTACAAGATTCAG...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATACCGTTATTATAAGGTaGCCAGAGTCTGAATCTTGT +
Preference number: 5 (lower is better)
Translates to: MGFYSLVHPRVQPFSYTNTVIIR*PESESC
Trigger: ACAAGATTCAGACTCTGGCAACCTTATAATAACGGT...ATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTATACATTTGGTTCCATaGATACAGCTCCCCTGTCCA +
Preference number: 5 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIIHLVP*IQLPCP
Trigger: TGGACAGGGGAGCTGTATCAATGGAACCAAATGTAT...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCGGGTCACATATACATTaGGTTCCATTGATACAGCTC +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIGSHIH*VPLIQL
Trigger: GAGCTGTATCAATGGAACCAAATGTATATGTGACCC...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTTGCTTATTTTACAGGTaGGACCTGAGTAGCCAGGGT +
Preference number: 5 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCACLFYR*DLSSQG
Trigger: ACCCTGGCTACTCAGGTCCAACCTGTAAAATAAGCA...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTATGTACCTGCCCACATaGCTGGAATTGCTGAAAAGG +
Preference number: 5 (lower is better)
Translates to: DITTDHNFHGHINMKTFTMYLPT*LELLKR
Trigger: CCTTTTCAGCAATTCCAGCAATGTGGGCAGGTACAT...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGATTCTAGTCCACTTGTaGAAAGTGTCTGACACCAGG +
Preference number: 5 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWILVHL*KVSDTR
Trigger: CCTGGTGTCAGACACTTTCAACAAGTGGACTAGAAT...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATATTCTAGTCCACTTGTaGAAAGTGTCTGACACCAGG +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYILVHL*KVSDTR
Trigger: CCTGGTGTCAGACACTTTCAACAAGTGGACTAGAAT...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTATTCTAGTCCACTTGTaGAAAGTGTCTGACACCAGG +
Preference number: 5 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPILVHL*KVSDTR
Trigger: CCTGGTGTCAGACACTTTCAACAAGTGGACTAGAAT...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTCAGTATAGACATTATCTATaGCCCATGTCTGCTGCTTGT +
Preference number: 5 (lower is better)
Translates to: YSLVHPRVQPFSYTNSIQYRHYL*PMSAAC
Trigger: ACAAGCAGCAGACATGGGCAATAGATAATGTCTATA...CTGAATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTGAAGTTGTCTTTGAGTaGGGTTGGAAGAGAGGTCTC +
Preference number: 5 (lower is better)
Translates to: DITTDHNFHGHINMKTFTEVVFE*GWKRGL
Trigger: GAGACCTCTCTTCCAACCCAACTCAAAGACAACTTC...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTGAAGTTGTCTTTGAGTaGGGTTGGAAGAGAGGTCTC +
Preference number: 5 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAEVVFE*GWKRGL
Trigger: GAGACCTCTCTTCCAACCCAACTCAAAGACAACTTC...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCACGATTGAAGTTGTCTTaGAGTTGGGTTGGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSRLKLS*SWVGRE
Trigger: CTCTCTTCCAACCCAACTCAAAGACAACTTCAATCG...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTCTGGATGGAGCTCGATaGAAGTTGTCTTTGAGTTGG +
Preference number: 5 (lower is better)
Translates to: DITTDHNFHGHINMKTFTLDGAR*KLSLSW
Trigger: CCAACTCAAAGACAACTTCAATCGAGCTCCATCCAG...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTACACCTTGGTTACGGTaGTTTGGTGTAATCAGGCAC +
Preference number: 5 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYITPWLR*FGVIRH
Trigger: GTGCCTGATTACACCAAACAACCGTAACCAAGGTGT...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTACTTATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTTCCAAGAGAACACCTaGGTTACGGTTGTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: FTYEQISHLSLVHSVGKWFQENT*VTVVWC
Trigger: ACACCAAACAACCGTAACCAAGGTGTTCTCTTGGAA...CCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATAAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATTTCCAAGAGAACACCTaGGTTACGGTTGTTTGGTGT +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYFQENT*VTVVWC
Trigger: ACACCAAACAACCGTAACCAAGGTGTTCTCTTGGAA...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAGGTAGAAATTATCGATaGCCCACTGCATGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: IVNTATVTDITTDHNFHGGRNYR*PTACLS
Trigger: ACTCAGACATGCAGTGGGCAATCGATAATTTCTACC...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTATCGAAGATCCAAATCTaGTGTAACCGCTTGTCTCAC +
Preference number: 5 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLSKIQI*CNRLSH
Trigger: GTGAGACAAGCGGTTACACAAGATTTGGATCTTCGA...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAGAGACCACAATTCCATaGCTGATCACAAAAGGCTGC +
Preference number: 5 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTETTIP*LITKGC
Trigger: GCAGCCTTTTGTGATCAGCAATGGAATTGTGGTCTC...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTACCAATTGGCTGGGATaGATTTCTGCTCCACCAATC +
Preference number: 5 (lower is better)
Translates to: DITTDHNFHGHINMKTFTTNWLG*ISAPPI
Trigger: GATTGGTGGAGCAGAAATCAATCCCAGCCAATTGGT...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACACTCGGTCTCGACATGCTCCCAATTaGCAAAACAAACATGATTTT +
Preference number: 5 (lower is better)
Translates to: NKSLVISSQCGKVVYTRSRHAPN*QNKHDF
Trigger: AAAATCATGTTTGTTTTGCAAATTGGGAGCATGTCG...AGACCGAGTGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCGAAATGGGAACTTATTaGTGGGAGATAGGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIEMGTY*WEIGSS
Trigger: TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTC...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCAGGGCCATTATAATGTaGCTGGTGTTGTACAACTTC +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIRAIIM*LVLYNF
Trigger: GAAGTTGTACAACACCAGCAACATTATAATGGCCCT...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CAA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAATGGGCTTTTATAGCTaGGTTCACCCTAGAGTGCAA +
Preference number: 5 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKMGFYS*VHPRVQ
Trigger: TTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CAA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAATGGGCTTTTATAGCTaGGTTCACCCTAGAGTGCAA +
Preference number: 5 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSMGFYS*VHPRVQ
Trigger: TTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCAT...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS TCA 90 bp TTCCAAATGCTTTCCAACATACCTGGGCTCATGATAGCTGAGATATaGATAATGCTCCAGGAGTTTCCAAGTTATCCCATTATCATAAGA +
Preference number: 5 (lower is better)
Translates to: FQMLSNIPGLMIAEI*IMLQEFPSYPIIIR
Trigger: TCTTATGATAATGGGATAACTTGGAAACTCCTGGAGCATTATTCATATCTCAGCTATCATGAGCCCAGGTATGTTGGAAAGCATTTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680712.1
CDS TCA 90 bp AAGAGTCTGCAAAAGCCCATATTGCCAAGTCTGAGGATTACAAATTaGGGTCTGAAGTTAGCTCATCATGGAAGTTATGATGAAAGTAAC +
Preference number: 5 (lower is better)
Translates to: KSLQKPILPSLRITN*GLKLAHHGSYDESN
Trigger: GTTACTTTCATCATAACTTCCATGATGAGCTAACTTCAGACCTCAATTTGTAATCCTCAGACTTGGCAATATGGGCTTTTGCAGACTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681921.1
CDS GCA 90 bp GTCAAATCGATTGCTCACATGTGGTTGTTAATAAAACTCCTATGGTaGTGCTCAAGGTGCCCATGGGGATTGTACAATTATTTATGTTTT +
Preference number: 5 (lower is better)
Translates to: VKSIAHMWLLIKLLW*CSRCPWGLYNYLCF
Trigger: AAAACATAAATAATTGTACAATCCCCATGGGCACCTTGAGCAGCACCATAGGAGTTTTATTAACAACCACATGTGAGCAATCGATTTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473457.2
CDS CCA 90 bp AAAGTCAAATCGATTGCTCACATGTGGTTGTTAATAAAACTCCTATaGTGCTGCTCAAGGTGCCCATGGGGATTGTACAATTATTTATGT +
Preference number: 5 (lower is better)
Translates to: KVKSIAHMWLLIKLL*CCSRCPWGLYNYLC
Trigger: ACATAAATAATTGTACAATCCCCATGGGCACCTTGAGCAGCACCATAGGAGTTTTATTAACAACCACATGTGAGCAATCGATTTGACTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473457.2
CDS CCA 90 bp TATGACAATAAATTCCTTCAAATGATCAGAAGTCAGTGGGACAAATaGATGGGTTGGCTTGGTAGTTTTTCACTGCAAGACACATCAATC +
Preference number: 5 (lower is better)
Translates to: YDNKFLQMIRSQWDK*MGWLGSFSLQDTSI
Trigger: GATTGATGTGTCTTGCAGTGAAAAACTACCAAGCCAACCCATCCATTTGTCCCACTGACTTCTGATCATTTGAAGGAATTTATTGTCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680712.1
CDS-3UTR CAA 90 bp TACAGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATCTCCAGTCTCACAGTaGTTACATTCAACCCATATA +
Preference number: 5 (lower is better)
Translates to: YRAIIMLLVLYNFIRRYESPVSQ*LHSTHI
Trigger: TATATGGGTTGAATGTAACAACTGTGAGACTGGAGA...TTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATTCCGCAGAGTTATTCTaGGCATATAACACGATGATG +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYSAELF*AYNTMM
Trigger: CATCATCGTGTTATATGCCAAGAATAACTCTGCGGA...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATATGATTGTGCTGACATaGGAAGGGGCTCTAATTTTC +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYMIVLT*EGALIF
Trigger: GAAAATTAGAGCCCCTTCCAATGTCAGCACAATCAT...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGATTCCTCTCTCCATCTTaGAGGAAGACCATTGATAAG +
Preference number: 5 (lower is better)
Translates to: IVNTATVTDITTDHNFHGFLSPS*RKTIDK
Trigger: CTTATCAATGGTCTTCCTCAAAGATGGAGAGAGGAA...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGTTCCACATCCCAGATaGATGGAAAACTGTATCATG +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYVPHPR*MENCIM
Trigger: CATGATACAGTTTTCCATCAATCTGGGATGTGGAAC...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTGTTCCACATCCCAGATaGATGGAAAACTGTATCATG +
Preference number: 5 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPVPHPR*MENCIM
Trigger: CATGATACAGTTTTCCATCAATCTGGGATGTGGAAC...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGGAATTCCAAACTGCTTaGCATCACCTGGTAGTTCTA +
Preference number: 5 (lower is better)
Translates to: TVTDITTDHNFHGHINMKEFQTA*HHLVVL
Trigger: TAGAACTACCAGGTGATGCAAAGCAGTTTGGAATTC...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCAATGCTCCTATCTGCATaGATTGTGTTTCCACATAGC +
Preference number: 5 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSMLLSA*IVFPHS
Trigger: GCTATGTGGAAACACAATCAATGCAGATAGGAGCAT...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTATGCTCCTATCTGCATaGATTGTGTTTCCACATAGC +
Preference number: 5 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIMLLSA*IVFPHS
Trigger: GCTATGTGGAAACACAATCAATGCAGATAGGAGCAT...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTGACAACTTGGCATACTaGGAAGGCATTCTTCTTGGA +
Preference number: 5 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIDNLAY*EGILLG
Trigger: TCCAAGAAGAATGCCTTCCAAGTATGCCAAGTTGTC...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTTGTCTTTTCCCAGCCTaGCTGAAGTACAGAGATGAT +
Preference number: 5 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYICLFPA*LKYRDD
Trigger: ATCATCTCTGTACTTCAGCAAGGCTGGGAAAAGACA...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTATTTTCCAAATATCATaGCTGATGGTGTGGCAGCAC +
Preference number: 5 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPIFQIS*LMVWQH
Trigger: GTGCTGCCACACCATCAGCAATGATATTTGGAAAAT...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATGGATTCGATACCAGTaGGCTTGCAAATCTATAGAG +
Preference number: 5 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSWIRYQ*ACKSIE
Trigger: CTCTATAGATTTGCAAGCCAACTGGTATCGAATCCA...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAACAGTCAATATCAACTaGACCTCCTTGGATTCGATA +
Preference number: 5 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTTVNIN*TSLDSI
Trigger: TATCGAATCCAAGGAGGTCAAGTTGATATTGACTGT...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAACAAGATGCCAGTCCTaGCCATTGTTCAGAGAATAC +
Preference number: 5 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTTRCQS*PLFREY
Trigger: GTATTCTCTGAACAATGGCAAGGACTGGCATCTTGT...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTTTCCGAGGTGTAAATaGAACTTTCCGTGTAATGCA +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIFPRCK*NFPCNA
Trigger: TGCATTACACGGAAAGTTCAATTTACACCTCGGAAA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAAGAGATGTTCCAGATTaGATGGTTTCACCATTCAGA +
Preference number: 5 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTRDVPD*MVSPFR
Trigger: TCTGAATGGTGAAACCATCAAATCTGGAACATCTCT...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTACTTCAGGTGCCCCCTTaGAAGAATATGGACAATAAA +
Preference number: 5 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLLQVPP*KNMDNK
Trigger: TTTATTGTCCATATTCTTCAAAGGGGGCACCTGAAG...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGGTCGAACAGCCAACGTaGATCTCAAATTGTATGATG +
Preference number: 5 (lower is better)
Translates to: TVTDITTDHNFHGHINMKVEQPT*ISNCMM
Trigger: CATCATACAATTTGAGATCAACGTTGGCTGTTCGAC...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAGTCGAACAGCCAACGTaGATCTCAAATTGTATGATG +
Preference number: 5 (lower is better)
Translates to: IVNTATVTDITTDHNFHGVEQPT*ISNCMM
Trigger: CATCATACAATTTGAGATCAACGTTGGCTGTTCGAC...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTGTCAATACTGCCACTGTAACTGATATTACAACAGATCACAACTTTCACGGAGGGTCACATATACATTaGGTTCCATTGATACAGCTC +
Preference number: 5 (lower is better)
Translates to: IVNTATVTDITTDHNFHGGSHIH*VPLIQL
Trigger: GAGCTGTATCAATGGAACCAAATGTATATGTGACCC...TCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGTGGCAGTATTGACAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTGTGATTCTAGTCCACTaGTTGAAAGTGTCTGACACC +
Preference number: 5 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAVILVH*LKVSDT
Trigger: GGTGTCAGACACTTTCAACAAGTGGACTAGAATCAC...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATCTATAGACATTATCTATaGCCCATGTCTGCTGCTTGT +
Preference number: 5 (lower is better)
Translates to: KIFRQGNGNLFVGDRVFIYRHYL*PMSAAC
Trigger: ACAAGCAGCAGACATGGGCAATAGATAATGTCTATA...GATGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTCGATTGAAGTTGTCTTaGAGTTGGGTTGGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: DITTDHNFHGHINMKTFTRLKLS*SWVGRE
Trigger: CTCTCTTCCAACCCAACTCAAAGACAACTTCAATCG...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAACAGGTAATGCCTCCATaGACAGAATATTCCAAGAGA +
Preference number: 5 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKQVMPP*TEYSKR
Trigger: TCTCTTGGAATATTCTGTCAATGGAGGCATTACCTG...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATCGAAGATCCAAATCTaGTGTAACCGCTTGTCTCAC +
Preference number: 5 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTSKIQI*CNRLSH
Trigger: GTGAGACAAGCGGTTACACAAGATTTGGATCTTCGA...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAGTATTGCAGGAACTTaGCACCTCGAAGATCCAAAT +
Preference number: 5 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLSIAGT*HLEDPN
Trigger: ATTTGGATCTTCGAGGTGCAAAGTTCCTGCAATACT...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAGAAATGGGAACTTATTaGTGGGAGATAGGGTCTTCA +
Preference number: 5 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLEMGTY*WEIGSS
Trigger: TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTC...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CAA 90 bp TATGAGCAAATAAGTCACTTGTCATTAGTTCACAGTGTGGGAAAGTGGTGTACAATAATGTTGCTGGTGTaGTACAACTTCATCAGAAGG +
Preference number: 5 (lower is better)
Translates to: YEQISHLSLVHSVGKWCTIMLLV*YNFIRR
Trigger: CCTTCTGATGAAGTTGTACAACACCAGCAACATTAT...TGTACACCACTTTCCCACACTGTGAACTAATGACAAGTGACTTATTTGCTCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CAA 90 bp ACTGTAACTGATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGAGGGCCATTATAATGTaGCTGGTGTTGTACAACTTC +
Preference number: 5 (lower is better)
Translates to: TVTDITTDHNFHGHINMKRAIIM*LVLYNF
Trigger: GAAGTTGTACAACACCAGCAACATTATAATGGCCCT...CTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATCAGTTACAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS CCA 90 bp TTGCGAGTGCTGAGTGACAATATATCCATATGTGGCATCAATATGTaGTTTATGAGAGTGAGCCTATCAGTATATTTCAAATTCACTGAG +
Preference number: 5 (lower is better)
Translates to: LRVLSDNISICGINM*FMRVSLSVYFKFTE
Trigger: CTCAGTGAATTTGAAATATACTGATAGGCTCACTCTCATAAACCACATATTGATGCCACATATGGATATATTGTCACTCAGCACTCGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429186.2
CDS CCA 90 bp ATTTCTTCTAAGGTTTCACCAGTCGTTTTTCAGATCTCATATTATTaGCTTTGGGAGGCACATTTAAATTCACCAGTTGTAGCACCTCTT +
Preference number: 5 (lower is better)
Translates to: ISSKVSPVVFQISYY*LWEAHLNSPVVAPL
Trigger: AAGAGGTGCTACAACTGGTGAATTTAAATGTGCCTCCCAAAGCCAATAATATGAGATCTGAAAAACGACTGGTGAAACCTTAGAAGAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681315.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATAGGTGCTTGTTGAAATaGTCACATGGTATTCTTGTC +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYRCLLK*SHGILV
Trigger: GACAAGAATACCATGTGACAATTTCAACAAGCACCT...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAATGATTGTGCTGACATaGGAAGGGGCTCTAATTTTC +
Preference number: 5 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTMIVLT*EGALIF
Trigger: GAAAATTAGAGCCCCTTCCAATGTCAGCACAATCAT...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAATCCTTGATGGTTCTTTaGCCTGAGACAAAATTTGGT +
Preference number: 5 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKSLMVL*PETKFG
Trigger: ACCAAATTTTGTCTCAGGCAAAAGAACCATCAAGGA...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATTCCTTGATGGTTCTTTaGCCTGAGACAAAATTTGGT +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYSLMVL*PETKFG
Trigger: ACCAAATTTTGTCTCAGGCAAAAGAACCATCAAGGA...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATGACCCGATTCCTATTATGTCCTaGATGGTTCTTTTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: IIMLLVLYNFIRRYEYDPIPIMS*MVLLPE
Trigger: CTCAGGCAAAAGAACCATCAAGGACATAATAGGAAT...CGGGTCATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTGTTCCACATCCCAGATaGATGGAAAACTGTATCATG +
Preference number: 5 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAVPHPR*MENCIM
Trigger: CATGATACAGTTTTCCATCAATCTGGGATGTGGAAC...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTGAATTCCAAACTGCTTaGCATCACCTGGTAGTTCTA +
Preference number: 5 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIEFQTA*HHLVVL
Trigger: TAGAACTACCAGGTGATGCAAAGCAGTTTGGAATTC...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAATCAAGACTAATGCTGTaGAAAAGCACAGATGTCATG +
Preference number: 5 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKSRLML*KSTDVM
Trigger: CATGACATCTGTGCTTTTCAACAGCATTAGTCTTGA...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTATTTTCCAAATATCATaGCTGATGGTGTGGCAGCAC +
Preference number: 5 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAIFQIS*LMVWQH
Trigger: GTGCTGCCACACCATCAGCAATGATATTTGGAAAAT...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTAGCAGTACTGCTGAATaGATTGGCACAACCTATGTT +
Preference number: 5 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCASSTAE*IGTTYV
Trigger: AACATAGGTTGTGCCAATCAATTCAGCAGTACTGCT...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTAGCAGTACTGCTGAATaGATTGGCACAACCTATGTT +
Preference number: 5 (lower is better)
Translates to: DITTDHNFHGHINMKTFTSSTAE*IGTTYV
Trigger: AACATAGGTTGTGCCAATCAATTCAGCAGTACTGCT...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AAAAGATCTTTAGACAAGGAAATGGGAACTTATTTGTGGGAGATAGGGTCTTCATTTCTAGTTCTTGGTTaGATGCAGGTAATGCCTGAA +
Preference number: 5 (lower is better)
Translates to: KRSLDKEMGTYLWEIGSSFLVLG*MQVMPE
Trigger: TTCAGGCATTACCTGCATCAAACCAAGAACTAGAAA...TGAAGACCCTATCTCCCACAAATAAGTTCCCATTTCCTTGTCTAAAGATCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATCACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAACAGTCAATATCAACTaGACCTCCTTGGATTCGATA +
Preference number: 5 (lower is better)
Translates to: NHQVLHRYFLISDVVRDLTVNIN*TSLDSI
Trigger: TATCGAATCCAAGGAGGTCAAGTTGATATTGACTGT...TAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATTTTCCGAGGTGTAAATaGAACTTTCCGTGTAATGCA +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYFPRCK*NFPCNA
Trigger: TGCATTACACGGAAAGTTCAATTTACACCTCGGAAA...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTTTATAGCTTGGTTCACCCTAGAGTGCAACCTTTCAGTTACACAAATAGCATTAGAGATGTTCCAGATTaGATGGTTTCACCATTCAGA +
Preference number: 5 (lower is better)
Translates to: FYSLVHPRVQPFSYTNSIRDVPD*MVSPFR
Trigger: TCTGAATGGTGAAACCATCAAATCTGGAACATCTCT...AATGCTATTTGTGTAACTGAAAGGTTGCACTCTAGGGTGAACCAAGCTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CACCAAGTCCTTCACAGATATTTCCTGATATCAGATGTAGTGCGAGATTTAAAAAGAGATGTTCCAGATTaGATGGTTTCACCATTCAGA +
Preference number: 5 (lower is better)
Translates to: HQVLHRYFLISDVVRDLKRDVPD*MVSPFR
Trigger: TCTGAATGGTGAAACCATCAAATCTGGAACATCTCT...TTTTAAATCTCGCACTACATCTGATATCAGGAAATATCTGTGAAGGACTTGGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTGTCGAACAGCCAACGTaGATCTCAAATTGTATGATG +
Preference number: 5 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCAVEQPT*ISNCMM
Trigger: CATCATACAATTTGAGATCAACGTTGGCTGTTCGAC...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTCATCCAACTGAGATCTaGAATTGCATAATCCAGCCT +
Preference number: 5 (lower is better)
Translates to: DITTDHNFHGHINMKTFTHPTEI*NCIIQP
Trigger: AGGCTGGATTATGCAATTCAAGATCTCAGTTGGATG...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAAGTATTGCAGGAACTTaGCACCTCGAAGATCCAAAT +
Preference number: 5 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTSIAGT*HLEDPN
Trigger: ATTTGGATCTTCGAGGTGCAAAGTTCCTGCAATACT...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AGGGCCATTATAATGTTGCTGGTGTTGTACAACTTCATCAGAAGGTATGAATATATTCATCATGTAATTTaGTTTGCGAGTGAGGACGAC +
Preference number: 5 (lower is better)
Translates to: RAIIMLLVLYNFIRRYEYIHHVI*FASEDD
Trigger: GTCGTCCTCACTCGCAAACAAAATTACATGATGAAT...ATATTCATACCTTCTGATGAAGTTGTACAACACCAGCAACATTATAATGGCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343529.9
CDS-3UTR CAA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTATAATGTTGCTGGTGTaGTACAACTTCATCAGAAGG +
Preference number: 5 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPIMLLV*YNFIRR
Trigger: CCTTCTGATGAAGTTGTACAACACCAGCAACATTAT...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS-3UTR CAA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTAGGGCCATTATAATGTaGCTGGTGTTGTACAACTTC +
Preference number: 5 (lower is better)
Translates to: DITTDHNFHGHINMKTFTRAIIM*LVLYNF
Trigger: GAAGTTGTACAACACCAGCAACATTATAATGGCCCT...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS TCA 90 bp TTTACTTGTTCCTTGGATTCAGCTCATAAAGAGTTGGACTGGAATTaGCATGTCTCAATTCCTAACTCCCATGCTAGTATATTTGACATA +
Preference number: 5 (lower is better)
Translates to: FTCSLDSAHKELDWN*HVSIPNSHASIFDI
Trigger: TATGTCAAATATACTAGCATGGGAGTTAGGAATTGAGACATGTCAATTCCAGTCCAACTCTTTATGAGCTGAATCCAAGGAACAAGTAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS TCA 90 bp ATGATCCTTGTTTCCCCTCTCTTAATGGCTTTCATATCCTGTGCCTaGATAACACAGTTTCATTGTCTCAACTCTAAATCATACTTTTCT +
Preference number: 5 (lower is better)
Translates to: MILVSPLLMAFISCA*ITQFHCLNSKSYFS
Trigger: AGAAAAGTATGATTTAGAGTTGAGACAATGAAACTGTGTTATTCAGGCACAGGATATGAAAGCCATTAAGAGAGGGGAAACAAGGATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681199.1
CDS TCA 90 bp GCAAATGAATTCAGAGAAATTAGGTTTCTGACACTTGATTGTCAATaGTCGTGTTATGCCACATCATTCAGACTTTATGGAATGAGGACT +
Preference number: 5 (lower is better)
Translates to: ANEFREIRFLTLDCQ*SCYATSFRLYGMRT
Trigger: AGTCCTCATTCCATAAAGTCTGAATGATGTGGCATAACACGATCATTGACAATCAAGTGTCAGAAACCTAATTTCTCTGAATTCATTTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679867.1
CDS CCA 90 bp CTTTCTCATCTCCTCATGATTAAAATATACTTCCAGGAAGTGAAGTaGAATGTTACTCCATTTATATGTGACTGTGAATGTAAGCCACAG +
Preference number: 5 (lower is better)
Translates to: LSHLLMIKIYFQEVK*NVTPFICDCECKPQ
Trigger: CTGTGGCTTACATTCACAGTCACATATAAATGGAGTAACATTCCACTTCACTTCCTGGAAGTATATTTTAATCATGAGGAGATGAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680712.1
CDS-3UTR CAA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTAGGTGCTTGTTGAAATaGTCACATGGTATTCTTGTC +
Preference number: 5 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIRCLLK*SHGILV
Trigger: GACAAGAATACCATGTGACAATTTCAACAAGCACCT...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTAGGTGCTTGTTGAAATaGTCACATGGTATTCTTGTC +
Preference number: 5 (lower is better)
Translates to: DITTDHNFHGHINMKTFTRCLLK*SHGILV
Trigger: GACAAGAATACCATGTGACAATTTCAACAAGCACCT...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp TTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACATTATTCCTATTATGTCCTaGATGGTTCTTTTGCCTGAG +
Preference number: 5 (lower is better)
Translates to: FRVKHFSYPQNNAKPTYIIPIMS*MVLLPE
Trigger: CTCAGGCAAAAGAACCATCAAGGACATAATAGGAAT...AATGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp GATATTACAACAGATCACAACTTTCACGGACACATCAACATGAAGACATTTACTTTTCTAGTTCTTGGTTaGATGCAGGTAATGCCTGAA +
Preference number: 5 (lower is better)
Translates to: DITTDHNFHGHINMKTFTFLVLG*MQVMPE
Trigger: TTCAGGCATTACCTGCATCAAACCAAGAACTAGAAA...AGTAAATGTCTTCATGTTGATGTGTCCGTGAAAGTTGTGATCTGTTGTAATATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAACCGTTATTATAAGGTaGCCAGAGTCTGAATCTTGT +
Preference number: 5 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTTVIIR*PESESC
Trigger: ACAAGATTCAGACTCTGGCAACCTTATAATAACGGT...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp CGAAATACAGTCCACTTAAATAGCTTTGTGACCAAGAATGTTAAATACTGTGCTACCGTTATTATAAGGTaGCCAGAGTCTGAATCTTGT +
Preference number: 5 (lower is better)
Translates to: RNTVHLNSFVTKNVKYCATVIIR*PESESC
Trigger: ACAAGATTCAGACTCTGGCAACCTTATAATAACGGT...AGCACAGTATTTAACATTCTTGGTCACAAAGCTATTTAAGTGGACTGTATTTCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp AATTTTTATTTAAGCATGGGCTTTTATAGCTTGGTTCACCCTAGAGTGCAACCTCGACATGCTCCCAATTaGCAAAACAAACATGATTTT +
Preference number: 5 (lower is better)
Translates to: NFYLSMGFYSLVHPRVQPRHAPN*QNKHDF
Trigger: AAAATCATGTTTGTTTTGCAAATTGGGAGCATGTCG...AGGTTGCACTCTAGGGTGAACCAAGCTATAAAAGCCCATGCTTAAATAAAAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000681034.1
CDS-3UTR CAA 90 bp ATTTCAGGGTCAAGCATTTTTCTTATCCACAAAACAACGCTAAACCAACATACAATAATGTTGCTGGTGTaGTACAACTTCATCAGAAGG +
Preference number: 5 (lower is better)
Translates to: ISGSSIFLIHKTTLNQHTIMLLV*YNFIRR
Trigger: CCTTCTGATGAAGTTGTACAACACCAGCAACATTAT...TGTATGTTGGTTTAGCGTTGTTTTGTGGATAAGAAAAATGCTTGACCCTGAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000429186.2
ENST00000681034.1
CDS TCA 90 bp CATTTCAGCACCCAGGTTATTTTATTCTGCTGGAATAACGTAGTCTaGGGAAATCAGTATCTAAGTAAAACATCAGCCTCATATTTAGAT +
Preference number: 5 (lower is better)
Translates to: HFSTQVILFCWNNVV*GNQYLSKTSASYLD
Trigger: ATCTAAATATGAGGCTGATGTTTTACTTAGATACTGATTTCCTCAGACTACGTTATTCCAGCAGAATAAAATAACCTGGGTGCTGAAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS GCA 90 bp TGTAACTCTGGGTCGATAGACCTATTTCTTCAAAGTCAGCAAAAATaGAACAGATTGCCAACAAATTCATGCATCCATTTATGTATTAGA +
Preference number: 5 (lower is better)
Translates to: CNSGSIDLFLQSQQK*NRLPTNSCIHLCIR
Trigger: TCTAATACATAAATGGATGCATGAATTTGTTGGCAATCTGTTGCATTTTTGCTGACTTTGAAGAAATAGGTCTATCGACCCAGAGTTACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681401.1
CDS GCA 72 bp AAGTTACTTTGGGCCGCGGGAGCGCGGGACCGGGGCTaGGGGCGCCGAGAGCGCGTCGTCTGCCGCCTCCGT +
Preference number: 6 (lower is better)
Translates to: KLLWAAGARDRG*GRRERVVCRLR
Trigger: ACGGAGGCGGCAGACGACGCGCTCTCGGCGCCCGCAGCCCCGGTCCCGCGCTCCCGCGGCCCAAAGTAACTT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000428762.6
ENST00000473457.2
ENST00000681401.1
CDS CAA 90 bp CGCCGCCGCCGCCGCGCGCCCTACGCGCCGCTCGCTCATTCAGTTTaGGAGACGCCGGGACGGAGGAGCCACGCGGAGAGAAGGCGAGAA +
Preference number: 6 (lower is better)
Translates to: RRRRRAPYAPLAHSV*ETPGRRSHAERRRE
Trigger: TTCTCGCCTTCTCTCCGCGTGGCTCCTCCGTCCCGGCGTCTCCAAAACTGAATGAGCGAGCGGCGCGTAGGGCGCGCGGCGGCGGCGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679689.1
ENST00000681034.1
ENST00000681182.1
ENST00000681401.1
CDS GCA 72 bp AGCGTCGCCCCCAGCAACAGCGCTAGGAGGAAAGTCTaGCGGGCCCAGCCACTGCGCTCCATGCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: SVAPSNSARRKV*RAQPLRSMPPP
Trigger: CGGCGGCGGCATGGAGCGCAGTGGCTGGGCCCGGCAGACTTTCCTCCTAGCGCTGTTGCTGGGGGCGACGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679689.1
ENST00000681034.1
ENST00000681182.1
ENST00000681401.1
CDS CAA 72 bp CGCCGCGCGCCCTACGCGCCGCTCGCTCATTCAGTTTaGGAGACGCCGGGACGGAGGAGCCACGCGGAGAGA +
Preference number: 6 (lower is better)
Translates to: RRAPYAPLAHSV*ETPGRRSHAER
Trigger: TCTCTCCGCGTGGCTCCTCCGTCCCGGCGTCTCCAAAACTGAATGAGCGAGCGGCGCGTAGGGCGCGCGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679689.1
ENST00000681034.1
ENST00000681182.1
ENST00000681401.1
CDS CCA 72 bp GCCGCGCGCCCTACGCGCCGCTCGCTCATTCAGTTTTaGAGACGCCGGGACGGAGGAGCCACGCGGAGAGAA +
Preference number: 6 (lower is better)
Translates to: AARPTRRSLIQF*RRRDGGATRRE
Trigger: TTCTCTCCGCGTGGCTCCTCCGTCCCGGCGTCTCCAAAACTGAATGAGCGAGCGGCGCGTAGGGCGCGCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679689.1
ENST00000681034.1
ENST00000681182.1
ENST00000681401.1
CDS CCA 72 bp CCGACAGGGCCGGCATCTGCAGGGGAGCGCTCATGCTaGGGTACTGGGGCGCTGCTGAAGGTGTCCAGCATA +
Preference number: 6 (lower is better)
Translates to: PTGPASAGERSC*GTGALLKVSSI
Trigger: TATGCTGGACACCTTCAGCAGCGCCCCAGTACCCCAGCATGAGCGCTCCCCTGCAGATGCCGGCCCTGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS CCA 72 bp CCTCCCCTGAGAACACGGGCTGCCACCAGCGGAACCTaGTGCAAGGGGTCTTGGCAGCAGCTGGAAGCTCCA +
Preference number: 6 (lower is better)
Translates to: PPLRTRAATSGT*CKGSWQQLEAP
Trigger: TGGAGCTTCCAGCTGCTGCCAAGACCCCTTGCACCAGGTTCCGCTGGTGGCAGCCCGTGTTCTCAGGGGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CCA 72 bp GCCGGCATCTGCAGGGGAGCGCTCATGCTGGGGTACTaGGGCGCTGCTGAAGGTGTCCAGCATAACGGTCCT +
Preference number: 6 (lower is better)
Translates to: AGICRGALMLGY*GAAEGVQHNGP
Trigger: AGGACCGTTATGCTGGACACCTTCAGCAGCGCCCCAGTACCCCAGCATGAGCGCTCCCCTGCAGATGCCGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS GCA 72 bp GGAAGCTCTCGTCGCAGATGCAGATGGCACCGGTCGTaGAGTATCCGTGCCCGCTGCAGAGCTTGGGGCAAG +
Preference number: 6 (lower is better)
Translates to: GSSRRRCRWHRS*SIRARCRAWGK
Trigger: CTTGCCCCAAGCTCTGCAGCGGGCACGGATACTGCACGACCGGTGCCATCTGCATCTGCGACGAGAGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 72 bp CCCTCCTCCAGCCCTGCATGGTTCCTGCGTAGTAGGTaGTGCTGGGGTGGTGCTCGGTGGAGCATAAAGAGC +
Preference number: 6 (lower is better)
Translates to: PSSSPAWFLRSR*CWGGARWSIKS
Trigger: GCTCTTTATGCTCCACCGAGCACCACCCCAGCAGCACCTACTACGCAGGAACCATGCAGGGCTGGAGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000681034.1
ENST00000681199.1
CDS TCA 72 bp GATGTCATCGACTGCCCACTGGTCATAGTCCTCCCCTaGGAACACGGGCTGCCACCAGCGGAACCTGGTGCA +
Preference number: 6 (lower is better)
Translates to: DVIDCPLVIVLP*EHGLPPAEPGA
Trigger: TGCACCAGGTTCCGCTGGTGGCAGCCCGTGTTCTCAGGGGAGGACTATGACCAGTGGGCAGTCGATGACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 72 bp CAGAGCAGTCATCACCTTGGAAGCTCTCGTCGCAGATaGAGATGGCACCGGTCGTGCAGTATCCGTGCCCGC +
Preference number: 6 (lower is better)
Translates to: QSSHHLGSSRRR*RWHRSCSIRAR
Trigger: GCGGGCACGGATACTGCACGACCGGTGCCATCTGCATCTGCGACGAGAGCTTCCAAGGTGATGACTGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CCA 72 bp ACGCTGTATTGCAGCAGCACTGCCTTGTCCACAGCGTaGGGGCCACTCAGGTCACTGTTGCAGCTGTCCGTC +
Preference number: 6 (lower is better)
Translates to: TLYCSSTALSTA*GPLRSLLQLSV
Trigger: GACGGACAGCTGCAACAGTGACCTGAGTGGCCCCCACGCTGTGGACAAGGCAGTGCTGCTGCAATACAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473945.1
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CAA 90 bp TCCTTTGGCTGGTGCTGGGCGATGACATGCCAGGTGATCCCGTTGTaGACGCTGTATTGCAGCAGCACTGCCTTGTCCACAGCGTGGGGG +
Preference number: 6 (lower is better)
Translates to: SFGWCWAMTCQVIPL*TLYCSSTALSTAWG
Trigger: CCCCCACGCTGTGGACAAGGCAGTGCTGCTGCAATACAGCGTCAACAACGGGATCACCTGGCATGTCATCGCCCAGCACCAGCCAAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473945.1
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS TCA 72 bp AGCAGGTGCCACTGGATGCCCCCATTGTTGCTGTACTaGAGGAGGACGCCCTCCTCTCTGCTGTCAGGCTTG +
Preference number: 6 (lower is better)
Translates to: SRCHWMPPLLLY*RRTPSSLLSGL
Trigger: CAAGCCTGACAGCAGAGAGGAGGGCGTCCTCCTTCAGTACAGCAACAATGGGGGCATCCAGTGGCACCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 72 bp GGTGATCCCGTTGTTGACGCTGTATTGCAGCAGCACTaGCTTGTCCACAGCGTGGGGGCCACTCAGGTCACT +
Preference number: 6 (lower is better)
Translates to: GDPVVDAVLQQH*LVHSVGATQVT
Trigger: AGTGACCTGAGTGGCCCCCACGCTGTGGACAAGGCAGTGCTGCTGCAATACAGCGTCAACAACGGGATCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473945.1
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CCA 72 bp AGTCATCACCTTGGAAGCTCTCGTCGCAGATGCAGATaGCACCGGTCGTGCAGTATCCGTGCCCGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: SHHLGSSRRRCR*HRSCSIRARCR
Trigger: TCTGCAGCGGGCACGGATACTGCACGACCGGTGCCATCTGCATCTGCGACGAGAGCTTCCAAGGTGATGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CAA 72 bp AACCCAGGGGCTGTAGAAGTGCCCATTCTCAGACGGTaGCCACCAGCGAAGGCGAGTAGAACCAGAACGGGC +
Preference number: 6 (lower is better)
Translates to: NPGAVEVPILRR*PPAKASRTRTG
Trigger: GCCCGTTCTGGTTCTACTCGCCTTCGCTGGTGGCAACCGTCTGAGAATGGGCACTTCTACAGCCCCTGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681315.1
CDS CAA 72 bp GATGACATGCCAGGTGATCCCGTTGTTGACGCTGTATaGCAGCAGCACTGCCTTGTCCACAGCGTGGGGGCC +
Preference number: 6 (lower is better)
Translates to: DDMPGDPVVDAV*QQHCLVHSVGA
Trigger: GGCCCCCACGCTGTGGACAAGGCAGTGCTGCTGCAATACAGCGTCAACAACGGGATCACCTGGCATGTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473945.1
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CAA 72 bp GGCTGGTGCTGGGCGATGACATGCCAGGTGATCCCGTaGTTGACGCTGTATTGCAGCAGCACTGCCTTGTCC +
Preference number: 6 (lower is better)
Translates to: GWCWAMTCQVIP*LTLYCSSTALS
Trigger: GGACAAGGCAGTGCTGCTGCAATACAGCGTCAACAACGGGATCACCTGGCATGTCATCGCCCAGCACCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473945.1
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CAA 90 bp AAGTCCTTTGGCTGGTGCTGGGCGATGACATGCCAGGTGATCCCGTaGTTGACGCTGTATTGCAGCAGCACTGCCTTGTCCACAGCGTGG +
Preference number: 6 (lower is better)
Translates to: KSFGWCWAMTCQVIP*LTLYCSSTALSTAW
Trigger: CCACGCTGTGGACAAGGCAGTGCTGCTGCAATACAGCGTCAACAACGGGATCACCTGGCATGTCATCGCCCAGCACCAGCCAAAGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473945.1
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS TCA 72 bp CCTGAGATGAGGACATTGTCAATGGCCCAGTCGTTCTaGTCCAGGCCGTCATGTCTTGGCTGCCACCAGCGG +
Preference number: 6 (lower is better)
Translates to: PEMRTLSMAQSF*SRPSCLGCHQR
Trigger: CCGCTGGTGGCAGCCAAGACATGACGGCCTGGATCAGAACGACTGGGCCATTGACAATGTCCTCATCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS GCA 72 bp ATGACATGCCAGGTGATCCCGTTGTTGACGCTGTATTaGAGCAGCACTGCCTTGTCCACAGCGTGGGGGCCA +
Preference number: 6 (lower is better)
Translates to: MTCQVIPLLTLY*SSTALSTAWGP
Trigger: TGGCCCCCACGCTGTGGACAAGGCAGTGCTGCTGCAATACAGCGTCAACAACGGGATCACCTGGCATGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473945.1
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CAA 72 bp GGACGGAAGGGCAGCTTCTGGGTGGCATTCAGTGCCTaGGTACCCCTGGTCACACCTGCATATGCCATGATC +
Preference number: 6 (lower is better)
Translates to: GRKGSFWVAFSA*VPLVTPAYAMI
Trigger: GATCATGGCATATGCAGGTGTGACCAGGGGTACCAAGGCACTGAATGCCACCCAGAAGCTGCCCTTCCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 72 bp GCTTCCCATGTTGCGGTTGCCACCATCGAAATGCCGTaGCAGGTGTCTTCGCGTCCTGTGGCAGGTCAATGG +
Preference number: 6 (lower is better)
Translates to: ASHVAVATIEMP*QVSSRPVAGQW
Trigger: CCATTGACCTGCCACAGGACGCGAAGACACCTGCAACGGCATTTCGATGGTGGCAACCGCAACATGGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 72 bp CAATGGCCCAGTCGTTCTGATCCAGGCCGTCATGTCTaGGCTGCCACCAGCGGAAGCGAGTGGCAATCTCTT +
Preference number: 6 (lower is better)
Translates to: QWPSRSDPGRHV*AATSGSEWQSL
Trigger: AAGAGATTGCCACTCGCTTCCGCTGGTGGCAGCCAAGACATGACGGCCTGGATCAGAACGACTGGGCCATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS CAA 90 bp CTGATCGATAACCCAGGGGCTGTAGAAGTGCCCATTCTCAGACGGTaGCCACCAGCGAAGGCGAGTAGAACCAGAACGGGCTTTCAAGGG +
Preference number: 6 (lower is better)
Translates to: LIDNPGAVEVPILRR*PPAKASRTRTGFQG
Trigger: CCCTTGAAAGCCCGTTCTGGTTCTACTCGCCTTCGCTGGTGGCAACCGTCTGAGAATGGGCACTTCTACAGCCCCTGGGTTATCGATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681315.1
CDS CAA 90 bp AAGCAGCAGCGCACACAGGAGGCTAGTGTGGGGACCAGGTTGCTCTaGGATTTGGGGGTTGATATGGATGCCATGCAAGCAGGTGCCTCA +
Preference number: 6 (lower is better)
Translates to: KQQRTQEASVGTRLL*DLGVDMDAMQAGAS
Trigger: TGAGGCACCTGCTTGCATGGCATCCATATCAACCCCCAAATCCAAGAGCAACCTGGTCCCCACACTAGCCTCCTGTGTGCGCTGCTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS TCA 72 bp AGGCCACCGTTGAGAGAATACTGTAGGAGCACGGGTTaGCTCCTGGGGTCAGGAACGCCTTTACCACATCCC +
Preference number: 6 (lower is better)
Translates to: RPPLREYCRSTG*LLGSGTPLPHP
Trigger: GGGATGTGGTAAAGGCGTTCCTGACCCCAGGAGTCAACCCGTGCTCCTACAGTATTCTCTCAACGGTGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681315.1
CDS GCA 72 bp CTTCCCATGTTGCGGTTGCCACCATCGAAATGCCGTTaGAGGTGTCTTCGCGTCCTGTGGCAGGTCAATGGA +
Preference number: 6 (lower is better)
Translates to: LPMLRLPPSKCR*RCLRVLWQVNG
Trigger: TCCATTGACCTGCCACAGGACGCGAAGACACCTGCAACGGCATTTCGATGGTGGCAACCGCAACATGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 72 bp CATAGCCAGCCTCTTCCCACCTGTGGCCTTTGCACCTaGTGTTCTTTCCTTTGGGTATGCTGTGCCCCACCA +
Preference number: 6 (lower is better)
Translates to: HSQPLPTCGLCT*CSFLWVCCAPP
Trigger: TGGTGGGGCACAGCATACCCAAAGGAAAGAACAGCAGGTGCAAAGGCCACAGGTGGGAAGAGGCTGGCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS GCA 72 bp AGCAGCGCACACAGGAGGCTAGTGTGGGGACCAGGTTaGTCTTGGATTTGGGGGTTGATATGGATGCCATGC +
Preference number: 6 (lower is better)
Translates to: SSAHRRLVWGPG*SWIWGLIWMPC
Trigger: GCATGGCATCCATATCAACCCCCAAATCCAAGAGCAACCTGGTCCCCACACTAGCCTCCTGTGTGCGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS CCA 72 bp AATGGCCCAGTCGTTCTGATCCAGGCCGTCATGTCTTaGCTGCCACCAGCGGAAGCGAGTGGCAATCTCTTT +
Preference number: 6 (lower is better)
Translates to: NGPVVLIQAVMS*LPPAEASGNLF
Trigger: AAAGAGATTGCCACTCGCTTCCGCTGGTGGCAGCCAAGACATGACGGCCTGGATCAGAACGACTGGGCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS CCA 72 bp GGATCACAGATGCACTGTTCCCTTAAGCAATCTCCATaGCCCCTGCAGTTGTCCAAGCATCCAGGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: GSQMHCSLKQSP*PLQLSKHPGPR
Trigger: CCTGGGCCCTGGATGCTTGGACAACTGCAGGGGCCATGGAGATTGCTTAAGGGAACAGTGCATCTGTGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CCA 72 bp TCCAACAGCACGCCTTCCTTCCGGCAGATGGGACGATaGCAAGAGGTCATGTTGTTCTCACTACCGATGCGC +
Preference number: 6 (lower is better)
Translates to: SNSTPSFRQMGR*QEVMLFSLPMR
Trigger: GCGCATCGGTAGTGAGAACAACATGACCTCTTGCCATCGTCCCATCTGCCGGAAGGAAGGCGTGCTGTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CAA 72 bp TGGTGCTGGGCGATGACATGCCAGGTGATCCCGTTGTaGACGCTGTATTGCAGCAGCACTGCCTTGTCCACA +
Preference number: 6 (lower is better)
Translates to: WCWAMTCQVIPL*TLYCSSTALST
Trigger: TGTGGACAAGGCAGTGCTGCTGCAATACAGCGTCAACAACGGGATCACCTGGCATGTCATCGCCCAGCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473945.1
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CAA 72 bp CAGGAGGCTAGTGTGGGGACCAGGTTGCTCTTGGATTaGGGGGTTGATATGGATGCCATGCAAGCAGGTGCC +
Preference number: 6 (lower is better)
Translates to: QEASVGTRLLLD*GVDMDAMQAGA
Trigger: GGCACCTGCTTGCATGGCATCCATATCAACCCCCAAATCCAAGAGCAACCTGGTCCCCACACTAGCCTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS CAA 90 bp GGGGCACTGCTGCCCAATGTAAATGCTGTCCAAAGCCCACTCGTCTaGAGCTGTGTAATAGCTCTGGCTCCAGCGGAAACGGGTAGCACT +
Preference number: 6 (lower is better)
Translates to: GALLPNVNAVQSPLV*SCVIALAPAETGST
Trigger: AGTGCTACCCGTTTCCGCTGGAGCCAGAGCTATTACACAGCTCAAGACGAGTGGGCTTTGGACAGCATTTACATTGGGCAGCAGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 90 bp AGCACGCCTTCCTTCCGGCAGATGGGACGATGGCAAGAGGTCATGTaGTTCTCACTACCGATGCGCCCCCAGTATTGCAGGAACTTTGCA +
Preference number: 6 (lower is better)
Translates to: STPSFRQMGRWQEVM*FSLPMRPQYCRNFA
Trigger: TGCAAAGTTCCTGCAATACTGGGGGCGCATCGGTAGTGAGAACAACATGACCTCTTGCCATCGTCCCATCTGCCGGAAGGAAGGCGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CAA 90 bp CCAAAGCCTTTTCTCCAGGACGACCTCCACATGGTCCAAAGCCCATaGATCATGACCTGTTCCATTGTGGCGTGGTTGCCACCAGCGCAG +
Preference number: 6 (lower is better)
Translates to: PKPFLQDDLHMVQSP*IMTCSIVAWLPPAQ
Trigger: CTGCGCTGGTGGCAACCACGCCACAATGGAACAGGTCATGATCAATGGGCTTTGGACCATGTGGAGGTCGTCCTGGAGAAAAGGCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429186.2
CDS CAA 90 bp CAGCGCACACAGGAGGCTAGTGTGGGGACCAGGTTGCTCTTGGATTaGGGGGTTGATATGGATGCCATGCAAGCAGGTGCCTCAGTGAAA +
Preference number: 6 (lower is better)
Translates to: QRTQEASVGTRLLLD*GVDMDAMQAGASVK
Trigger: TTTCACTGAGGCACCTGCTTGCATGGCATCCATATCAACCCCCAAATCCAAGAGCAACCTGGTCCCCACACTAGCCTCCTGTGTGCGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS TCA 72 bp TGGGGTCCAGCACAGATCTCAGGTAAGCATTCAGTGTaGAGGAGGGACCAGGAGCGCCCATGGTTGGTAGAA +
Preference number: 6 (lower is better)
Translates to: WGPAQISGKHSV*RRDQERPWLVE
Trigger: TTCTACCAACCATGGGCGCTCCTGGTCCCTCCTTCACACTGAATGCTTACCTGAGATCTGTGCTGGACCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681931.1
CDS TCA 72 bp TTCTTGGACGAGGTGCCAGGTAAGGCCGTGGTTGGTTaGGTACTCCAGCTTCACCTGGTTGTCCATGTGTGG +
Preference number: 6 (lower is better)
Translates to: FLDEVPGKAVVG*VLQLHLVVHVW
Trigger: CCACACATGGACAACCAGGTGAAGCTGGAGTACTCAACCAACCACGGCCTTACCTGGCACCTCGTCCAAGAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 72 bp GAGGACGCCCTCCTCTCTGCTGTCAGGCTTGTTGCATaGAGCACTCTCTCCGCCTATCTGGATGTAGAACTG +
Preference number: 6 (lower is better)
Translates to: EDALLSAVRLVA*STLSAYLDVEL
Trigger: CAGTTCTACATCCAGATAGGCGGAGAGAGTGCTTCATGCAACAAGCCTGACAGCAGAGAGGAGGGCGTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 72 bp GGAACTCCTGAAGAAGACTCCACGAGAGGCCACCGTTaGGAGAATACTGTAGGAGCACGGGTTGACTCCTGG +
Preference number: 6 (lower is better)
Translates to: GTPEEDSTRGHR*ENTVGARVDSW
Trigger: CCAGGAGTCAACCCGTGCTCCTACAGTATTCTCTCAACGGTGGCCTCTCGTGGAGTCTTCTTCAGGAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681315.1
CDS TCA 72 bp AGGTCATGGGTCACTGCATACACCTCCCGTCCATCATaGCTGCCACAGAGCATCACACCATCAGGGGAGTCA +
Preference number: 6 (lower is better)
Translates to: RSWVTAYTSRPS*LPQSITPSGES
Trigger: TGACTCCCCTGATGGTGTGATGCTCTGTGGCAGTCATGATGGACGGGAGGTGTATGCAGTGACCCATGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS TCA 72 bp GAGCACGCTCCACCCCAGAGACCACAATTCCATTGCTaGTCACAAAAGGCTGCCACCAGCGAAGTCGAGTTG +
Preference number: 6 (lower is better)
Translates to: EHAPPQRPQFHC*SQKAATSEVEL
Trigger: CAACTCGACTTCGCTGGTGGCAGCCTTTTGTGATCAGCAATGGAATTGTGGTCTCTGGGGTGGAGCGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS TCA 72 bp GGAGCCTGGAAAGCTCCGGTACCTCAGGCAGCATTCTaGCTCTCTCTCTCTCCTCCTCTCTCTGCTCATGAT +
Preference number: 6 (lower is better)
Translates to: GAWKAPVPQAAF*LSLSPPLSAHD
Trigger: ATCATGAGCAGAGAGAGGAGGAGAGAGAGAGAGTCAGAATGCTGCCTGAGGTACCGGAGCTTTCCAGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS CCA 72 bp AGGCATTCTTCTTGGACGAGGTGCCAGGTAAGGCCGTaGTTGGTTGAGTACTCCAGCTTCACCTGGTTGTCC +
Preference number: 6 (lower is better)
Translates to: RHSSWTRCQVRP*LVEYSSFTWLS
Trigger: GGACAACCAGGTGAAGCTGGAGTACTCAACCAACCACGGCCTTACCTGGCACCTCGTCCAAGAAGAATGCCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CCA 72 bp GGGGCGCTGCTGAAGGTGTCCAGCATAACGGTCCTTTaGTCAGCAGAGCCTGAGATGAGGACATTGTCAATG +
Preference number: 6 (lower is better)
Translates to: GALLKVSSITVL*SAEPEMRTLSM
Trigger: CATTGACAATGTCCTCATCTCAGGCTCTGCTGACCAAAGGACCGTTATGCTGGACACCTTCAGCAGCGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS CCA 72 bp AGGAGGCTAGTGTGGGGACCAGGTTGCTCTTGGATTTaGGGGTTGATATGGATGCCATGCAAGCAGGTGCCT +
Preference number: 6 (lower is better)
Translates to: RRLVWGPGCSWI*GLIWMPCKQVP
Trigger: AGGCACCTGCTTGCATGGCATCCATATCAACCCCCAAATCCAAGAGCAACCTGGTCCCCACACTAGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS CCA 72 bp GCACACAGGAGGCTAGTGTGGGGACCAGGTTGCTCTTaGATTTGGGGGTTGATATGGATGCCATGCAAGCAG +
Preference number: 6 (lower is better)
Translates to: AHRRLVWGPGCS*IWGLIWMPCKQ
Trigger: CTGCTTGCATGGCATCCATATCAACCCCCAAATCCAAGAGCAACCTGGTCCCCACACTAGCCTCCTGTGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS CAA 72 bp GCGAGTGAGGACGACCTCCACATGGTCCAAAGCCCATaGATCATGACCTGTTCCATTGTGGCGTGGTTGCCA +
Preference number: 6 (lower is better)
Translates to: ASEDDLHMVQSP*IMTCSIVAWLP
Trigger: TGGCAACCACGCCACAATGGAACAGGTCATGATCAATGGGCTTTGGACCATGTGGAGGTCGTCCTCACTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000679371.1
ENST00000680248.1
ENST00000681364.1
CDS CAA 72 bp CGCACACAGGAGGCTAGTGTGGGGACCAGGTTGCTCTaGGATTTGGGGGTTGATATGGATGCCATGCAAGCA +
Preference number: 6 (lower is better)
Translates to: RTQEASVGTRLL*DLGVDMDAMQA
Trigger: TGCTTGCATGGCATCCATATCAACCCCCAAATCCAAGAGCAACCTGGTCCCCACACTAGCCTCCTGTGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS CAA 90 bp TCCAGTTCTACAGGAAAGGACGACCTCCACATGGTCCAAAGCCCATaGATCATGACCTGTTCCATTGTGGCGTGGTTGCCACCAGCGCAG +
Preference number: 6 (lower is better)
Translates to: SSSTGKDDLHMVQSP*IMTCSIVAWLPPAQ
Trigger: CTGCGCTGGTGGCAACCACGCCACAATGGAACAGGTCATGATCAATGGGCTTTGGACCATGTGGAGGTCGTCCTTTCCTGTAGAACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473945.1
ENST00000681034.1
CDS TCA 72 bp AATCAGCCCCCACAGTGTAGTTGGCCTGAATCCATCTaGACCGGGTCCTGGGAGAAATGGTGGAGAGTGGAA +
Preference number: 6 (lower is better)
Translates to: NQPPQCSWPESI*TGSWEKWWRVE
Trigger: TTCCACTCTCCACCATTTCTCCCAGGACCCGGTTCAGATGGATTCAGGCCAACTACACTGTGGGGGCTGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 72 bp GCTGAGAGCCGGCAGGGTAAAATCCCTGGTACCATCTaGAACGGACAGATCCACAAAGGTGCAGCTTCCCAA +
Preference number: 6 (lower is better)
Translates to: AESRQGKIPGTI*NGQIHKGAASQ
Trigger: TTGGGAAGCTGCACCTTTGTGGATCTGTCCGTTTCAGATGGTACCAGGGATTTTACCCTGCCGGCTCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681199.1
CDS TCA 72 bp GGCATAAGTCTGAGGTCCCCCTCAGTCTCCCGTGACTaGTTGCTGGTAGCAATCTCTGCTCGATGTACTCGT +
Preference number: 6 (lower is better)
Translates to: GISLRSPSVSRD*LLVAISARCTR
Trigger: ACGAGTACATCGAGCAGAGATTGCTACCAGCAATCAGTCACGGGAGACTGAGGGGGACCTCAGACTTATGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478148.2
CDS TCA 72 bp GTGAGGCATAAGTCTGAGGTCCCCCTCAGTCTCCCGTaGCTGATTGCTGGTAGCAATCTCTGCTCGATGTAC +
Preference number: 6 (lower is better)
Translates to: VRHKSEVPLSLP*LIAGSNLCSMY
Trigger: GTACATCGAGCAGAGATTGCTACCAGCAATCAGTCACGGGAGACTGAGGGGGACCTCAGACTTATGCCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478148.2
CDS TCA 72 bp CCTGCTCAGAACTGGCACTGGACGGCCAGCAGAATGTaGGGGGCCTTTCAGAATGCTCTTGTTTATGTCTGC +
Preference number: 6 (lower is better)
Translates to: PAQNWHWTASRM*GAFQNALVYVC
Trigger: GCAGACATAAACAAGAGCATTCTGAAAGGCCCCTCACATTCTGCTGGCCGTCCAGTGCCAGTTCTGAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681364.1
CDS GCA 72 bp GGGCCATATGGTTCACAGAAGGTGACGGCATTGCCATaGATAATCGCGCCACACTGTTCTCCAGTCTCACAG +
Preference number: 6 (lower is better)
Translates to: GPYGSQKVTALP*IIAPHCSPVSQ
Trigger: CTGTGAGACTGGAGAACAGTGTGGCGCGATTATGCATGGCAATGCCGTCACCTTCTGTGAACCATATGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681931.1
CDS GCA 72 bp CTTGGCATACTTGGAAGGCATTCTTCTTGGACGAGGTaGCAGGTAAGGCCGTGGTTGGTTGAGTACTCCAGC +
Preference number: 6 (lower is better)
Translates to: LGILGRHSSWTR*QVRPWLVEYSS
Trigger: GCTGGAGTACTCAACCAACCACGGCCTTACCTGGCACCTCGTCCAAGAAGAATGCCTTCCAAGTATGCCAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 72 bp ACCTGCATATGCCATGATCGCATGAGCCATGCCCACTaGACATGTTGGGGCACTGCTGCCCAATGTAAATGC +
Preference number: 6 (lower is better)
Translates to: TCICHDRMSHAH*TCWGTAAQCKC
Trigger: GCATTTACATTGGGCAGCAGTGCCCCAACATGTGCAGTGGGCATGGCTCATGCGATCATGGCATATGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 72 bp AGTAGCAGTTTGGCCCTGAGTATCCCGGATCACAGATaGACTGTTCCCTTAAGCAATCTCCATGGCCCCTGC +
Preference number: 6 (lower is better)
Translates to: SSSLALSIPDHR*TVPLSNLHGPC
Trigger: GCAGGGGCCATGGAGATTGCTTAAGGGAACAGTGCATCTGTGATCCGGGATACTCAGGGCCAAACTGCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 72 bp CTAGAACATAGCCAGCCTCTTCCCACCTGTGGCCTTTaGACCTGCTGTTCTTTCCTTTGGGTATGCTGTGCC +
Preference number: 6 (lower is better)
Translates to: LEHSQPLPTCGL*TCCSFLWVCCA
Trigger: GGCACAGCATACCCAAAGGAAAGAACAGCAGGTGCAAAGGCCACAGGTGGGAAGAGGCTGGCTATGTTCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS CCA 72 bp ACCAGTAGAGCCACACACGGGCATCTTGGTGCCTCCTaGGTGAAGCAGCCATTTCCTACTATCAAGGGTTGT +
Preference number: 6 (lower is better)
Translates to: TSRATHGHLGAS*VKQPFPTIKGC
Trigger: ACAACCCTTGATAGTAGGAAATGGCTGCTTCACCCAGGAGGCACCAAGATGCCCGTGTGTGGCTCTACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681315.1
ENST00000681364.1
CDS CCA 72 bp TTGTCCAAAAGCAGCAGCGCACACAGGAGGCTAGTGTaGGGACCAGGTTGCTCTTGGATTTGGGGGTTGATA +
Preference number: 6 (lower is better)
Translates to: LSKSSSAHRRLV*GPGCSWIWGLI
Trigger: TATCAACCCCCAAATCCAAGAGCAACCTGGTCCCCACACTAGCCTCCTGTGTGCGCTGCTGCTTTTGGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS CAA 72 bp TCTCGTGGGCCATATGGTTCACAGAAGGTGACGGCATaGCCATGCATAATCGCGCCACACTGTTCTCCAGTC +
Preference number: 6 (lower is better)
Translates to: SRGPYGSQKVTA*PCIIAPHCSPV
Trigger: GACTGGAGAACAGTGTGGCGCGATTATGCATGGCAATGCCGTCACCTTCTGTGAACCATATGGCCCACGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681931.1
CDS CAA 72 bp CATTCTTCTTGGACGAGGTGCCAGGTAAGGCCGTGGTaGGTTGAGTACTCCAGCTTCACCTGGTTGTCCATG +
Preference number: 6 (lower is better)
Translates to: HSSWTRCQVRPW*VEYSSFTWLSM
Trigger: CATGGACAACCAGGTGAAGCTGGAGTACTCAACCAACCACGGCCTTACCTGGCACCTCGTCCAAGAAGAATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 72 bp CCGCCACCCCACCTGGCCCAGTCTATACCCAAACACTaGTGCAGACACATGCATTTACTAAGGGCAGCTCAA +
Preference number: 6 (lower is better)
Translates to: PPPHLAQSIPKH*CRHMHLLRAAQ
Trigger: TTGAGCTGCCCTTAGTAAATGCATGTGTCTGCACAAGTGTTTGGGTATAGACTGGGCCAGGTGGGGTGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS CAA 72 bp TCCCACCTGTGGCCTTTGCACCTGCTGTTCTTTCCTTaGGGTATGCTGTGCCCCACCATCCACAGACCTTTA +
Preference number: 6 (lower is better)
Translates to: SHLWPLHLLFFP*GMLCPTIHRPL
Trigger: TAAAGGTCTGTGGATGGTGGGGCACAGCATACCCAAAGGAAAGAACAGCAGGTGCAAAGGCCACAGGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS CAA 90 bp CAGCCAGTTCTGACTGGATGGAGCTCGATTGAAGTTGTCTTTGAGTaGGGTTGGAAGAGAGGTCTCGGGGTCATCACAGTACAGGCCACC +
Preference number: 6 (lower is better)
Translates to: QPVLTGWSSIEVVFE*GWKRGLGVITVQAT
Trigger: GGTGGCCTGTACTGTGATGACCCCGAGACCTCTCTTCCAACCCAACTCAAAGACAACTTCAATCGAGCTCCATCCAGTCAGAACTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000679952.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS CAA 90 bp ATTTTGTTTGCGAGTGAGGACGACCTCCACATGGTCCAAAGCCCATaGATCATGACCTGTTCCATTGTGGCGTGGTTGCCACCAGCGCAG +
Preference number: 6 (lower is better)
Translates to: ILFASEDDLHMVQSP*IMTCSIVAWLPPAQ
Trigger: CTGCGCTGGTGGCAACCACGCCACAATGGAACAGGTCATGATCAATGGGCTTTGGACCATGTGGAGGTCGTCCTCACTCGCAAACAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000343529.9
ENST00000679371.1
ENST00000680248.1
ENST00000681364.1
CDS TCA 72 bp TGCAGCAGTATATCCCAGGTCACAGAAACACACTCCTaGAATGCAGTCCCCATGGCCACTGCAGTAACTGGG +
Preference number: 6 (lower is better)
Translates to: CSSISQVTETHS*NAVPMATAVTG
Trigger: CCCAGTTACTGCAGTGGCCATGGGGACTGCATTTCAGGAGTGTGTTTCTGTGACCTGGGATATACTGCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 72 bp CCAGGGCAATGTACCTGCCCACATTGCTGGAATTGCTaGAAAGGAACTCCTGAAGAAGACTCCACGAGAGGC +
Preference number: 6 (lower is better)
Translates to: PGQCTCPHCWNC*KGTPEEDSTRG
Trigger: GCCTCTCGTGGAGTCTTCTTCAGGAGTTCCTTTTCAGCAATTCCAGCAATGTGGGCAGGTACATTGCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681315.1
CDS TCA 72 bp GTAGAGCCACACACGGGCATCTTGGTGCCTCCTGGGTaGAGCAGCCATTTCCTACTATCAAGGGTTGTGAAA +
Preference number: 6 (lower is better)
Translates to: VEPHTGILVPPG*SSHFLLSRVVK
Trigger: TTTCACAACCCTTGATAGTAGGAAATGGCTGCTTCACCCAGGAGGCACCAAGATGCCCGTGTGTGGCTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681315.1
ENST00000681364.1
CDS TCA 72 bp ATTGCCCATGTCTGCTGCTTGTCAAAAGGAGCTGGTTaGTGCCAACGGAAACGAGTGGCTTGGGACCTGGTA +
Preference number: 6 (lower is better)
Translates to: IAHVCCLSKGAG*CQRKRVAWDLV
Trigger: TACCAGGTCCCAAGCCACTCGTTTCCGTTGGCATCAACCAGCTCCTTTTGACAAGCAGCAGACATGGGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000681034.1
ENST00000681364.1
CDS TCA 72 bp TCTGCTCCACCAATCAAAATGTTGTCCAGTGCCCACTaGGCACGCTCCACCCCAGAGACCACAATTCCATTG +
Preference number: 6 (lower is better)
Translates to: SAPPIKMLSSAH*ARSTPETTIPL
Trigger: CAATGGAATTGTGGTCTCTGGGGTGGAGCGTGCTCAGTGGGCACTGGACAACATTTTGATTGGTGGAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS TCA 72 bp ATTGCCCATGTCTGCTGCTTGTCAAAAGGAGCTGGTTaGTGCCAACGGAAACGAGTGGCTTGGGACCATGGA +
Preference number: 6 (lower is better)
Translates to: IAHVCCLSKGAG*CQRKRVAWDHG
Trigger: TCCATGGTCCCAAGCCACTCGTTTCCGTTGGCATCAACCAGCTCCTTTTGACAAGCAGCAGACATGGGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679952.1
CDS GCA 72 bp AGATGCACTGTTCCCTTAAGCAATCTCCATGGCCCCTaGAGTTGTCCAAGCATCCAGGGCCCAGGTAGAAAT +
Preference number: 6 (lower is better)
Translates to: RCTVPLSNLHGP*SCPSIQGPGRN
Trigger: ATTTCTACCTGGGCCCTGGATGCTTGGACAACTGCAGGGGCCATGGAGATTGCTTAAGGGAACAGTGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 72 bp GACGATGGCAAGAGGTCATGTTGTTCTCACTACCGATaGGCCCCCAGTATTGCAGGAACTTTGCACCTCGAA +
Preference number: 6 (lower is better)
Translates to: DDGKRSCCSHYR*APSIAGTLHLE
Trigger: TTCGAGGTGCAAAGTTCCTGCAATACTGGGGGCGCATCGGTAGTGAGAACAACATGACCTCTTGCCATCGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 72 bp CCAGAGACCACAATTCCATTGCTGATCACAAAAGGCTaGCACCAGCGAAGTCGAGTTGTGTTGGTGAGGGCA +
Preference number: 6 (lower is better)
Translates to: PETTIPLLITKG*HQRSRVVLVRA
Trigger: TGCCCTCACCAACACAACTCGACTTCGCTGGTGGCAGCCTTTTGTGATCAGCAATGGAATTGTGGTCTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 72 bp GCTGGCTTGGGCTGCAAAGGGAGTTTAATGACAGGTTaGAGGGCTCAGTCTGAATTACAGCTCTGCAACTCC +
Preference number: 6 (lower is better)
Translates to: AGLGCKGSLMTG*RAQSELQLCNS
Trigger: GGAGTTGCAGAGCTGTAATTCAGACTGAGCCCTGCAACCTGTCATTAAACTCCCTTTGCAGCCCAAGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS GCA 72 bp AGTATGGAAGGGGGCCCTAAAAGATGGCAGAGGATTTaGCCCAGAGACCGAGCCAGAAAGAATTCCAAGGGA +
Preference number: 6 (lower is better)
Translates to: SMEGGPKRWQRI*PRDRARKNSKG
Trigger: TCCCTTGGAATTCTTTCTGGCTCGGTCTCTGGGGCAAATCCTCTGCCATCTTTTAGGGCCCCCTTCCATACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS CCA 72 bp GTAAGGCCGTGGTTGGTTGAGTACTCCAGCTTCACCTaGTTGTCCATGTGTGGGGTGTATTTCTGGCCACAT +
Preference number: 6 (lower is better)
Translates to: VRPWLVEYSSFT*LSMCGVYFWPH
Trigger: ATGTGGCCAGAAATACACCCCACACATGGACAACCAGGTGAAGCTGGAGTACTCAACCAACCACGGCCTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CCA 72 bp TTGCCATCGTTAAGTGTTCCACAGCCAGTTCCAACCTaGGCACCTGTTATCTTGTACCACAGAGGGCTGAGC +
Preference number: 6 (lower is better)
Translates to: LPSLSVPQPVPT*APVILYHRGLS
Trigger: GCTCAGCCCTCTGTGGTACAAGATAACAGGTGCCCAGGTTGGAACTGGCTGTGGAACACTTAACGATGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CCA 72 bp GGATGGAGCTCGATTGAAGTTGTCTTTGAGTTGGGTTaGAAGAGAGGTCTCGGGGTCATCACAGTACAGGCC +
Preference number: 6 (lower is better)
Translates to: GWSSIEVVFELG*KRGLGVITVQA
Trigger: GGCCTGTACTGTGATGACCCCGAGACCTCTCTTCCAACCCAACTCAAAGACAACTTCAATCGAGCTCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000679952.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS CAA 72 bp TATTGCCCATGTCTGCTGCTTGTCAAAAGGAGCTGGTaGATGCCAACGGAAACGAGTGGCTTGGGACCTGGT +
Preference number: 6 (lower is better)
Translates to: YCPCLLLVKRSW*MPTETSGLGPG
Trigger: ACCAGGTCCCAAGCCACTCGTTTCCGTTGGCATCAACCAGCTCCTTTTGACAAGCAGCAGACATGGGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000681034.1
ENST00000681364.1
CDS CAA 72 bp TTTCTCCAGGACGACCTCCACATGGTCCAAAGCCCATaGATCATGACCTGTTCCATTGTGGCGTGGTTGCCA +
Preference number: 6 (lower is better)
Translates to: FLQDDLHMVQSP*IMTCSIVAWLP
Trigger: TGGCAACCACGCCACAATGGAACAGGTCATGATCAATGGGCTTTGGACCATGTGGAGGTCGTCCTGGAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429186.2
CDS CAA 72 bp ACAGGAAAGGACGACCTCCACATGGTCCAAAGCCCATaGATCATGACCTGTTCCATTGTGGCGTGGTTGCCA +
Preference number: 6 (lower is better)
Translates to: TGKDDLHMVQSP*IMTCSIVAWLP
Trigger: TGGCAACCACGCCACAATGGAACAGGTCATGATCAATGGGCTTTGGACCATGTGGAGGTCGTCCTTTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473945.1
ENST00000681034.1
CDS CAA 72 bp ATCTACCGAGAAGATTCACCTCTCCTTGCCAACCACTaGGAGCCATCAGTCCGAACCCGTCGAGACATAAGC +
Preference number: 6 (lower is better)
Translates to: IYREDSPLLANH*EPSVRTRRDIS
Trigger: GCTTATGTCTCGACGGGTTCGGACTGATGGCTCCAAGTGGTTGGCAAGGAGAGGTGAATCTTCTCGGTAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473945.1
ENST00000679867.1
ENST00000681921.1
CDS CAA 72 bp TATTGCCCATGTCTGCTGCTTGTCAAAAGGAGCTGGTaGATGCCAACGGAAACGAGTGGCTTGGGACCATGG +
Preference number: 6 (lower is better)
Translates to: YCPCLLLVKRSW*MPTETSGLGPW
Trigger: CCATGGTCCCAAGCCACTCGTTTCCGTTGGCATCAACCAGCTCCTTTTGACAAGCAGCAGACATGGGCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679952.1
CDS CAA 90 bp TGTAATAGATACTCACAGGACGACCTCCACATGGTCCAAAGCCCATaGATCATGACCTGTTCCATTGTGGCGTGGTTGCCACCAGCGCAG +
Preference number: 6 (lower is better)
Translates to: CNRYSQDDLHMVQSP*IMTCSIVAWLPPAQ
Trigger: CTGCGCTGGTGGCAACCACGCCACAATGGAACAGGTCATGATCAATGGGCTTTGGACCATGTGGAGGTCGTCCTGTGAGTATCTATTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS CAA 90 bp GTAATCAGTTCTCGTGGGCCATATGGTTCACAGAAGGTGACGGCATaGCCATGCATAATCGCGCCACACTGTTCTCCAGTCTCACAGTTG +
Preference number: 6 (lower is better)
Translates to: VISSRGPYGSQKVTA*PCIIAPHCSPVSQL
Trigger: CAACTGTGAGACTGGAGAACAGTGTGGCGCGATTATGCATGGCAATGCCGTCACCTTCTGTGAACCATATGGCCCACGAGAACTGATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681931.1
CDS CAA 90 bp AGCGTTCCTTCAGGAAAGTCTTCAGAGTGTGGGTCAAGTAGCAGTTaGGCCCTGAGTATCCCGGATCACAGATGCACTGTTCCCTTAAGC +
Preference number: 6 (lower is better)
Translates to: SVPSGKSSECGSSSS*ALSIPDHRCTVPLS
Trigger: GCTTAAGGGAACAGTGCATCTGTGATCCGGGATACTCAGGGCCAAACTGCTACTTGACCCACACTCTGAAGACTTTCCTGAAGGAACGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CAA 90 bp CCAGCCTCTTCCCACCTGTGGCCTTTGCACCTGCTGTTCTTTCCTTaGGGTATGCTGTGCCCCACCATCCACAGACCTTTAGTTAATAAT +
Preference number: 6 (lower is better)
Translates to: PASSHLWPLHLLFFP*GMLCPTIHRPLVNN
Trigger: ATTATTAACTAAAGGTCTGTGGATGGTGGGGCACAGCATACCCAAAGGAAAGAACAGCAGGTGCAAAGGCCACAGGTGGGAAGAGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS CAA 90 bp TACTTTAAACTTCAACTTTGTCTTGTGGAGGCAGAGCCCAGCAAGTaGTCCAAAAGCAGCAGCGCACACAGGAGGCTAGTGTGGGGACCA +
Preference number: 6 (lower is better)
Translates to: YFKLQLCLVEAEPSK*SKSSSAHRRLVWGP
Trigger: TGGTCCCCACACTAGCCTCCTGTGTGCGCTGCTGCTTTTGGACAACTTGCTGGGCTCTGCCTCCACAAGACAAAGTTGAAGTTTAAAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS TCA 72 bp CCAGTCAGACTCCCAGCCATTCTGGTTCTCAAAATCTaGCATAATTGTGGACGGAAGGGCAGCTTCTGGGTG +
Preference number: 6 (lower is better)
Translates to: PVRLPAILVLKI*HNCGRKGSFWV
Trigger: CACCCAGAAGCTGCCCTTCCGTCCACAATTATGTCAGATTTTGAGAACCAGAATGGCTGGGAGTCTGACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 72 bp CAAAAGGCTGCCACCAGCGAAGTCGAGTTGTGTTGGTaGGGGCATCTTCAGGAAGAAGTATGTAGTCGTGTC +
Preference number: 6 (lower is better)
Translates to: QKAATSEVELCW*GHLQEEVCSRV
Trigger: GACACGACTACATACTTCTTCCTGAAGATGCCCTCACCAACACAACTCGACTTCGCTGGTGGCAGCCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS TCA 72 bp AGGAGTCTTAGGAACTTACTACTCCTTTGCTCACTCTaGCAGCCCCAGGGGCTCTCATTCAGGCTGACACAA +
Preference number: 6 (lower is better)
Translates to: RSLRNLLLLCSL*QPQGLSFRLTQ
Trigger: TTGTGTCAGCCTGAATGAGAGCCCCTGGGGCTGTCAGAGTGAGCAAAGGAGTAGTAAGTTCCTAAGACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681199.1
CDS TCA 72 bp AAGCTGTGGGCTGTGGACCTCATCTTGGGCAAGCAGTaGCAATGCAGCATCAACACTGTTGCTCTGACATCA +
Preference number: 6 (lower is better)
Translates to: KLWAVDLILGKQ*QCSINTVALTS
Trigger: TGATGTCAGAGCAACAGTGTTGATGCTGCATTGTCACTGCTTGCCCAAGATGAGGTCCACAGCCCACAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS GCA 72 bp CACTGCACATGTTGGGGCACTGCTGCCCAATGTAAATaGTGTCCAAAGCCCACTCGTCTTGAGCTGTGTAAT +
Preference number: 6 (lower is better)
Translates to: HCTCWGTAAQCK*CPKPTRLELCN
Trigger: ATTACACAGCTCAAGACGAGTGGGCTTTGGACAGCATTTACATTGGGCAGCAGTGCCCCAACATGTGCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 72 bp GCTCACTTAGTTCTCTGGAGTTTCCTTCGCATCCTTTaGCTGCAGAAGCCGGGTAACAGCCTTCTTTCACCA +
Preference number: 6 (lower is better)
Translates to: AHLVLWSFLRIL*LQKPGNSLLSP
Trigger: TGGTGAAAGAAGGCTGTTACCCGGCTTCTGCAGGCAAAGGATGCGAAGGAAACTCCAGAGAACTAAGTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 72 bp AGAAACACACTCCTGAAATGCAGTCCCCATGGCCACTaGAGTAACTGGGACAAGGCTCGGATATGTACACTC +
Preference number: 6 (lower is better)
Translates to: RNTLLKCSPHGH*SNWDKARICTL
Trigger: GAGTGTACATATCCGAGCCTTGTCCCAGTTACTGCAGTGGCCATGGGGACTGCATTTCAGGAGTGTGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 72 bp CAGTATATCCCAGGTCACAGAAACACACTCCTGAAATaGAGTCCCCATGGCCACTGCAGTAACTGGGACAAG +
Preference number: 6 (lower is better)
Translates to: QYIPGHRNTLLK*SPHGHCSNWDK
Trigger: CTTGTCCCAGTTACTGCAGTGGCCATGGGGACTGCATTTCAGGAGTGTGTTTCTGTGACCTGGGATATACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 72 bp CCTGGATGCATCTCCCATGGCCACTGCACATGTCTATaGAGCCATCCCCGATATAGACATTATCTATTGCCC +
Preference number: 6 (lower is better)
Translates to: PGCISHGHCTCL*SHPRYRHYLLP
Trigger: GGGCAATAGATAATGTCTATATCGGGGATGGCTGCATAGACATGTGCAGTGGCCATGGGAGATGCATCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681364.1
CDS GCA 72 bp AACCGCTTGTCTCACAGTGGATCCCCCAAAATAGAGTaGAGTGTCCTCGGCAAGAATTCCACACTCAGTGCA +
Preference number: 6 (lower is better)
Translates to: NRLSHSGSPKIE*SVLGKNSTLSA
Trigger: TGCACTGAGTGTGGAATTCTTGCCGAGGACACTGCACTCTATTTTGGGGGATCCACTGTGAGACAAGCGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 72 bp TGGGGGCCACTCAGGTCACTGTTGCAGCTGTCCGTCTaGGACATGCTCCCAATTTGCAAAACAAACATGATT +
Preference number: 6 (lower is better)
Translates to: WGPLRSLLQLSV*DMLPICKTNMI
Trigger: AATCATGTTTGTTTTGCAAATTGGGAGCATGTCGCAGACGGACAGCTGCAACAGTGACCTGAGTGGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473945.1
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 72 bp GAAAAGATGACTATCTCCGAGCAGCCGCAAGCCCTCTaGATTTGGCTTGGGAACAGAACATGGGCTGGATTT +
Preference number: 6 (lower is better)
Translates to: EKMTISEQPQAL*IWLGNRTWAGF
Trigger: AAATCCAGCCCATGTTCTGTTCCCAAGCCAAATGCAGAGGGCTTGCGGCTGCTCGGAGATAGTCATCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679952.1
CDS CCA 72 bp CTTCGCGTCCTGTGGCAGGTCAATGGAAATGATCTGTaGTTCCAGGAAGGACATGAAGTCCAACTCTCGAAG +
Preference number: 6 (lower is better)
Translates to: LRVLWQVNGNDL*FQEGHEVQLSK
Trigger: CTTCGAGAGTTGGACTTCATGTCCTTCCTGGAACCACAGATCATTTCCATTGACCTGCCACAGGACGCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CCA 72 bp ATCTATTGCCCATGTCTGCTGCTTGTCAAAAGGAGCTaGTTGATGCCAACGGAAACGAGTGGCTTGGGACCT +
Preference number: 6 (lower is better)
Translates to: IYCPCLLLVKRS*LMPTETSGLGP
Trigger: AGGTCCCAAGCCACTCGTTTCCGTTGGCATCAACCAGCTCCTTTTGACAAGCAGCAGACATGGGCAATAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000681034.1
ENST00000681364.1
CDS CCA 72 bp ATCTATTGCCCATGTCTGCTGCTTGTCAAAAGGAGCTaGTTGATGCCAACGGAAACGAGTGGCTTGGGACCA +
Preference number: 6 (lower is better)
Translates to: IYCPCLLLVKRS*LMPTETSGLGP
Trigger: TGGTCCCAAGCCACTCGTTTCCGTTGGCATCAACCAGCTCCTTTTGACAAGCAGCAGACATGGGCAATAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679952.1
CDS CCA 72 bp GAGGTTTCCTTAAGCTGTGGGCTGTGGACCTCATCTTaGGCAAGCAGTGACAATGCAGCATCAACACTGTTG +
Preference number: 6 (lower is better)
Translates to: EVSLSCGLWTSS*ASSDNAASTLL
Trigger: CAACAGTGTTGATGCTGCATTGTCACTGCTTGCCCAAGATGAGGTCCACAGCCCACAGCTTAAGGAAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS CCA 72 bp CTGAATGACTTCGAGGTTTCCTTAAGCTGTGGGCTGTaGACCTCATCTTGGGCAAGCAGTGACAATGCAGCA +
Preference number: 6 (lower is better)
Translates to: LNDFEVSLSCGL*TSSWASSDNAA
Trigger: TGCTGCATTGTCACTGCTTGCCCAAGATGAGGTCCACAGCCCACAGCTTAAGGAAACCTCGAAGTCATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS CAA 72 bp CATTTGAACCTATCTACCGAGAAGATTCACCTCTCCTaGCCAACCACTTGGAGCCATCAGTCCGAACCCGTC +
Preference number: 6 (lower is better)
Translates to: HLNLSTEKIHLS*PTTWSHQSEPV
Trigger: GACGGGTTCGGACTGATGGCTCCAAGTGGTTGGCAAGGAGAGGTGAATCTTCTCGGTAGATAGGTTCAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473945.1
ENST00000679867.1
ENST00000681921.1
CDS CAA 72 bp GCAGTTACTGCTTTCCAGGTGATGCTGATGGCTGGATaGGGCACTGATCCAGTACAGTGGTTCTCAATCCTG +
Preference number: 6 (lower is better)
Translates to: AVTAFQVMLMAG*GTDPVQWFSIL
Trigger: CAGGATTGAGAACCACTGTACTGGATCAGTGCCCAATCCAGCCATCAGCATCACCTGGAAAGCAGTAACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS CAA 90 bp GTTGGAGGAACACACTCTTCGGTGACAAGATGCCAGTCCTTGCCATaGTTCAGAGAATACTGGAGCTGTACACTGTGGGAGTTGCTGAAG +
Preference number: 6 (lower is better)
Translates to: VGGTHSSVTRCQSLP*FREYWSCTLWELLK
Trigger: CTTCAGCAACTCCCACAGTGTACAGCTCCAGTATTCTCTGAACAATGGCAAGGACTGGCATCTTGTCACCGAAGAGTGTGTTCCTCCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 90 bp CCAATGGTTGGAGGAACACACTCTTCGGTGACAAGATGCCAGTCCTaGCCATTGTTCAGAGAATACTGGAGCTGTACACTGTGGGAGTTG +
Preference number: 6 (lower is better)
Translates to: PMVGGTHSSVTRCQS*PLFREYWSCTLWEL
Trigger: CAACTCCCACAGTGTACAGCTCCAGTATTCTCTGAACAATGGCAAGGACTGGCATCTTGTCACCGAAGAGTGTGTTCCTCCAACCATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 90 bp GACATTATCTATTGCCCATGTCTGCTGCTTGTCAAAAGGAGCTGGTaGATGCCAACGGAAACGAGTGGCTTGGGACCTGGTATAAGGAGG +
Preference number: 6 (lower is better)
Translates to: DIIYCPCLLLVKRSW*MPTETSGLGPGIRR
Trigger: CCTCCTTATACCAGGTCCCAAGCCACTCGTTTCCGTTGGCATCAACCAGCTCCTTTTGACAAGCAGCAGACATGGGCAATAGATAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000681034.1
ENST00000681364.1
CDS CAA 90 bp TTGCAGGAACTTTGCACCTCGAAGATCCAAATCTTGTGTAACCGCTaGTCTCACAGTGGATCCCCCAAAATAGAGTGCAGTGTCCTCGGC +
Preference number: 6 (lower is better)
Translates to: LQELCTSKIQILCNR*SHSGSPKIECSVLG
Trigger: GCCGAGGACACTGCACTCTATTTTGGGGGATCCACTGTGAGACAAGCGGTTACACAAGATTTGGATCTTCGAGGTGCAAAGTTCCTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CAA 90 bp GACATTATCTATTGCCCATGTCTGCTGCTTGTCAAAAGGAGCTGGTaGATGCCAACGGAAACGAGTGGCTTGGGACCATGGAATGACACC +
Preference number: 6 (lower is better)
Translates to: DIIYCPCLLLVKRSW*MPTETSGLGPWNDT
Trigger: GGTGTCATTCCATGGTCCCAAGCCACTCGTTTCCGTTGGCATCAACCAGCTCCTTTTGACAAGCAGCAGACATGGGCAATAGATAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679952.1
CDS TCA 72 bp ACGTGCTCAGAACAGATTTGCTCCCCAGTCTCAGTGTaGACTGGAGAAACCTGGATTGTGAGCTGTCAAGGA +
Preference number: 6 (lower is better)
Translates to: TCSEQICSPVSV*TGETWIVSCQG
Trigger: TCCTTGACAGCTCACAATCCAGGTTTCTCCAGTTCACACTGAGACTGGGGAGCAAATCTGTTCTGAGCACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
CDS TCA 72 bp CAACCTGGGCACCTGTTATCTTGTACCACAGAGGGCTaGGCTTCCCCTCAAACCTATCGAACATCTCATTGT +
Preference number: 6 (lower is better)
Translates to: QPGHLLSCTTEG*ASPQTYRTSHC
Trigger: ACAATGAGATGTTCGATAGGTTTGAGGGGAAGCTCAGCCCTCTGTGGTACAAGATAACAGGTGCCCAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 72 bp GGGTTGATATGGATGCCATGCAAGCAGGTGCCTCAGTaGAAACTAAGACGAGGGCTAGCTCAAGACTGGAAA +
Preference number: 6 (lower is better)
Translates to: GLIWMPCKQVPQ*KLRRGLAQDWK
Trigger: TTTCCAGTCTTGAGCTAGCCCTCGTCTTAGTTTTCACTGAGGCACCTGCTTGCATGGCATCCATATCAACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473945.1
ENST00000679867.1
ENST00000681921.1
CDS GCA 72 bp CATCTAAACCAAATGGAGGCACGTTTTTCTGTGAGCTaGTCTCCTGGATCCATCGGAATCTGGTCTTGCTGG +
Preference number: 6 (lower is better)
Translates to: HLNQMEARFSVS*SPGSIGIWSCW
Trigger: CCAGCAAGACCAGATTCCGATGGATCCAGGAGAGCAGCTCACAGAAAAACGTGCCTCCATTTGGTTTAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 72 bp CCAATGGTTGGAGGAACACACTCTTCGGTGACAAGATaGCAGTCCTTGCCATTGTTCAGAGAATACTGGAGC +
Preference number: 6 (lower is better)
Translates to: PMVGGTHSSVTR*QSLPLFREYWS
Trigger: GCTCCAGTATTCTCTGAACAATGGCAAGGACTGGCATCTTGTCACCGAAGAGTGTGTTCCTCCAACCATTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 72 bp ATTGATTTCTGCTCCACCAATCAAAATGTTGTCCAGTaGCCACTGAGCACGCTCCACCCCAGAGACCACAAT +
Preference number: 6 (lower is better)
Translates to: IDFCSTNQNVVQ*PLSTLHPRDHN
Trigger: ATTGTGGTCTCTGGGGTGGAGCGTGCTCAGTGGGCACTGGACAACATTTTGATTGGTGGAGCAGAAATCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 72 bp TTAGAAGAGGAAGGAAGGCACTGGGTCTGTACGAGCTaGCAGGAATCCGATCTTGCATCCTTAGTGTATTCC +
Preference number: 6 (lower is better)
Translates to: LEEEGRHWVCTS*QESDLASLVYS
Trigger: GGAATACACTAAGGATGCAAGATCGGATTCCTGGCAGCTCGTACAGACCCAGTGCCTTCCTTCCTCTTCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CCA 72 bp AAACATTGGGAATGTCTGGGATGCCATCTCACAAGCTaGGCCAGAAAATCCAGGGTCACACTTGCAACCATG +
Preference number: 6 (lower is better)
Translates to: KHWECLGCHLTS*ARKSRVTLATM
Trigger: CATGGTTGCAAGTGTGACCCTGGATTTTCTGGCCCAGCTTGTGAGATGGCATCCCAGACATTCCCAATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
CDS CCA 72 bp ACAAGATGCCAGTCCTTGCCATTGTTCAGAGAATACTaGAGCTGTACACTGTGGGAGTTGCTGAAGGGCTTG +
Preference number: 6 (lower is better)
Translates to: TRCQSLPLFREY*SCTLWELLKGL
Trigger: CAAGCCCTTCAGCAACTCCCACAGTGTACAGCTCCAGTATTCTCTGAACAATGGCAAGGACTGGCATCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CCA 72 bp TTTCCCTCCGTTCACAGTCAGCCAGTTCTGACTGGATaGAGCTCGATTGAAGTTGTCTTTGAGTTGGGTTGG +
Preference number: 6 (lower is better)
Translates to: FPSVHSQPVLTG*SSIEVVFELGW
Trigger: CCAACCCAACTCAAAGACAACTTCAATCGAGCTCCATCCAGTCAGAACTGGCTGACTGTGAACGGAGGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000679952.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS CCA 72 bp CTGGGCAACAAGATCAAGGCTCAAATCCGAAAGCACTaGAACCTCCAATGCTCTGTGATGCCTGAACACTTG +
Preference number: 6 (lower is better)
Translates to: LGNKIKAQIRKH*NLQCSVMPEHL
Trigger: CAAGTGTTCAGGCATCACAGAGCATTGGAGGTTCCAGTGCTTTCGGATTTGAGCCTTGATCTTGTTGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS CCA 72 bp GTGTTCCCCACACCCTTTGGCTCTTCTATAAAAAGATaGGAGGGATCTAAAGGCGGTTTGAGTGTGGGAGTG +
Preference number: 6 (lower is better)
Translates to: VFPTPFGSSIKR*EGSKGGLSVGV
Trigger: CACTCCCACACTCAAACCGCCTTTAGATCCCTCCCATCTTTTTATAGAAGAGCCAAAGGGTGTGGGGAACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681315.1
CDS CCA 72 bp CTGGCTCCTTCTTGTTGCCGATGCCCGCCTGTACTTTaGACACCTTACACGCCTTGCCATATCAGAATTTTT +
Preference number: 6 (lower is better)
Translates to: LAPSCCRCPPVL*TPYTPCHIRIF
Trigger: AAAAATTCTGATATGGCAAGGCGTGTAAGGTGTCCAAAGTACAGGCGGGCATCGGCAACAAGAAGGAGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS CAA 72 bp GGAGGAACACACTCTTCGGTGACAAGATGCCAGTCCTaGCCATTGTTCAGAGAATACTGGAGCTGTACACTG +
Preference number: 6 (lower is better)
Translates to: GGTHSSVTRCQS*PLFREYWSCTL
Trigger: CAGTGTACAGCTCCAGTATTCTCTGAACAATGGCAAGGACTGGCATCTTGTCACCGAAGAGTGTGTTCCTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 72 bp CTGACTGGATGGAGCTCGATTGAAGTTGTCTTTGAGTaGGGTTGGAAGAGAGGTCTCGGGGTCATCACAGTA +
Preference number: 6 (lower is better)
Translates to: LTGWSSIEVVFE*GWKRGLGVITV
Trigger: TACTGTGATGACCCCGAGACCTCTCTTCCAACCCAACTCAAAGACAACTTCAATCGAGCTCCATCCAGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000679952.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS CAA 72 bp TCAGGAAAGTCTTCAGAGTGTGGGTCAAGTAGCAGTTaGGCCCTGAGTATCCCGGATCACAGATGCACTGTT +
Preference number: 6 (lower is better)
Translates to: SGKSSECGSSSS*ALSIPDHRCTV
Trigger: AACAGTGCATCTGTGATCCGGGATACTCAGGGCCAAACTGCTACTTGACCCACACTCTGAAGACTTTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CAA 72 bp TCTGGCTCCTTCTTGTTGCCGATGCCCGCCTGTACTTaGGACACCTTACACGCCTTGCCATATCAGAATTTT +
Preference number: 6 (lower is better)
Translates to: SGSFLLPMPACT*DTLHALPYQNF
Trigger: AAAATTCTGATATGGCAAGGCGTGTAAGGTGTCCAAAGTACAGGCGGGCATCGGCAACAAGAAGGAGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS CAA 90 bp ACTCAGGTCACTGTTGCAGCTGTCCGTCTGCGACATGCTCCCAATTaGCAAAACAAACATGATTTTGCTTGCTCGAGTGAGATCCAGAGG +
Preference number: 6 (lower is better)
Translates to: TQVTVAAVRLRHAPN*QNKHDFACSSEIQR
Trigger: CCTCTGGATCTCACTCGAGCAAGCAAAATCATGTTTGTTTTGCAAATTGGGAGCATGTCGCAGACGGACAGCTGCAACAGTGACCTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473945.1
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CAA 90 bp TTTGAACCTATCTACCGAGAAGATTCACCTCTCCTTGCCAACCACTaGGAGCCATCAGTCCGAACCCGTCGAGACATAAGCATTCCAGTT +
Preference number: 6 (lower is better)
Translates to: FEPIYREDSPLLANH*EPSVRTRRDISIPV
Trigger: AACTGGAATGCTTATGTCTCGACGGGTTCGGACTGATGGCTCCAAGTGGTTGGCAAGGAGAGGTGAATCTTCTCGGTAGATAGGTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473945.1
ENST00000679867.1
ENST00000681921.1
CDS TCA 72 bp AGGCAGAGTGATTCTAGTCCACTTGTTGAAAGTGTCTaGCACCAGGATCCGTTGCAGATGATAGCGACTGCA +
Preference number: 6 (lower is better)
Translates to: RQSDSSPLVESV*HQDPLQMIATA
Trigger: TGCAGTCGCTATCATCTGCAACGGATCCTGGTGTCAGACACTTTCAACAAGTGGACTAGAATCACTCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681315.1
ENST00000681364.1
CDS TCA 72 bp CCCAAGCTCAAAAGTGTCTTTGGACCATTAAACCAATaGTACAGGGTTGCCTGTGAGAGGAAGGCTAGGTGC +
Preference number: 6 (lower is better)
Translates to: PKLKSVFGPLNQ*YRVACERKARC
Trigger: GCACCTAGCCTTCCTCTCACAGGCAACCCTGTATCATTGGTTTAATGGTCCAAAGACACTTTTGAGCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS TCA 72 bp ACTAGATCATTAGAGAAAAAGCAAGTCATCTCTCTGTaGGGGAACAGTCAACCCGGCCAGGTGAGAGTGGTG +
Preference number: 6 (lower is better)
Translates to: TRSLEKKQVISL*GNSQPGQVRVV
Trigger: CACCACTCTCACCTGGCCGGGTTGACTGTTCCCTCACAGAGAGATGACTTGCTTTTTCTCTAATGATCTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS GCA 72 bp CTGACATCAGCCAATGACTCATCTGGGCAGGGCTACTaGTGGGACTTGACACTTCATATATCAAAAGGAGGT +
Preference number: 6 (lower is better)
Translates to: LTSANDSSGQGY*WDLTLHISKGG
Trigger: ACCTCCTTTTGATATATGAAGTGTCAAGTCCCAGCAGTAGCCCTGCCCAGATGAGTCATTGGCTGATGTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS CAA 72 bp TACTGGAGCTGTACACTGTGGGAGTTGCTGAAGGGCTaGCTACAGCCCATGCTCATTTCAAACTGCAAAAAG +
Preference number: 6 (lower is better)
Translates to: YWSCTLWELLKG*LQPMLISNCKK
Trigger: CTTTTTGCAGTTTGAAATGAGCATGGGCTGTAGCAAGCCCTTCAGCAACTCCCACAGTGTACAGCTCCAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 72 bp TTGTTCAGAGAATACTGGAGCTGTACACTGTGGGAGTaGCTGAAGGGCTTGCTACAGCCCATGCTCATTTCA +
Preference number: 6 (lower is better)
Translates to: LFREYWSCTLWE*LKGLLQPMLIS
Trigger: TGAAATGAGCATGGGCTGTAGCAAGCCCTTCAGCAACTCCCACAGTGTACAGCTCCAGTATTCTCTGAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 72 bp TGTCCAAGCATCCAGGGCCCAGGTAGAAATTATCGATaGCCCACTGCATGTCTGAGTACTTCTGATAGAACC +
Preference number: 6 (lower is better)
Translates to: CPSIQGPGRNYR*PTACLSTSDRT
Trigger: GGTTCTATCAGAAGTACTCAGACATGCAGTGGGCAATCGATAATTTCTACCTGGGCCCTGGATGCTTGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CAA 72 bp GCCTTTTTCGTTTGTTTGTTTGTTTGTTTTGATCTGTaGGCCTGCTCAGAACTGGCACTGGACGGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: AFFVCLFVCFDL*ACSELALDGQQ
Trigger: CTGCTGGCCGTCCAGTGCCAGTTCTGAGCAGGCCAACAGATCAAAACAAACAAACAAACAAACGAAAAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478148.2
ENST00000681364.1
CDS CAA 72 bp GTGGCTAATTGGTACCAGTGGGATGCAAGGTGGCGCTaGTTCTGGCTGTCTTGGAACAAAAGCAACTATCTT +
Preference number: 6 (lower is better)
Translates to: VANWYQWDARWR*FWLSWNKSNYL
Trigger: AAGATAGTTGCTTTTGTTCCAAGACAGCCAGAACAAGCGCCACCTTGCATCCCACTGGTACCAATTAGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681921.1
CDS CAA 90 bp TCTGTTGGAGCTCCTTGTTCACACAACTGCTGGGCTAAAGCATCTTaGAAAATAACCTGGCCCCGGTGTGTTGCTGTAGCCATGAAATTC +
Preference number: 6 (lower is better)
Translates to: SVGAPCSHNCWAKAS*KITWPRCVAVAMKF
Trigger: GAATTTCATGGCTACAGCAACACACCGGGGCCAGGTTATTTTCAAAGATGCTTTAGCCCAGCAGTTGTGTGAACAAGGAGCTCCAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681401.1
ENST00000681931.1
CDS CAA 90 bp GCTTCCCCTCAAACCTATCGAACATCTCATTGTGATTGGGGACATTaGACACACAGGTTCCTTGTGCAGCAGTATATCCCAGGTCACAGA +
Preference number: 6 (lower is better)
Translates to: ASPQTYRTSHCDWGH*THRFLVQQYIPGHR
Trigger: TCTGTGACCTGGGATATACTGCTGCACAAGGAACCTGTGTGTCAAATGTCCCCAATCACAATGAGATGTTCGATAGGTTTGAGGGGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 90 bp TCCTTGCCATTGTTCAGAGAATACTGGAGCTGTACACTGTGGGAGTaGCTGAAGGGCTTGCTACAGCCCATGCTCATTTCAAACTGCAAA +
Preference number: 6 (lower is better)
Translates to: SLPLFREYWSCTLWE*LKGLLQPMLISNCK
Trigger: TTTGCAGTTTGAAATGAGCATGGGCTGTAGCAAGCCCTTCAGCAACTCCCACAGTGTACAGCTCCAGTATTCTCTGAACAATGGCAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 90 bp TTCAGAGAATACTGGAGCTGTACACTGTGGGAGTTGCTGAAGGGCTaGCTACAGCCCATGCTCATTTCAAACTGCAAAAAGGTAGATGCT +
Preference number: 6 (lower is better)
Translates to: FREYWSCTLWELLKG*LQPMLISNCKKVDA
Trigger: AGCATCTACCTTTTTGCAGTTTGAAATGAGCATGGGCTGTAGCAAGCCCTTCAGCAACTCCCACAGTGTACAGCTCCAGTATTCTCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 90 bp GAAAGTTCTGCCTTTTTCGTTTGTTTGTTTGTTTGTTTTGATCTGTaGGCCTGCTCAGAACTGGCACTGGACGGCCAGCAGAATGTGAGG +
Preference number: 6 (lower is better)
Translates to: ESSAFFVCLFVCFDL*ACSELALDGQQNVR
Trigger: CCTCACATTCTGCTGGCCGTCCAGTGCCAGTTCTGAGCAGGCCAACAGATCAAAACAAACAAACAAACAAACGAAAAAGGCAGAACTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478148.2
ENST00000681364.1
CDS CAA 90 bp AGGGGCAGGATTACTATCCTGCCTTCTTTTGAGGACTGTCAGGTTTaGAAGTTTCCACAGGAGTTTGGTAATGCTTTGTCAGGCACAGGA +
Preference number: 6 (lower is better)
Translates to: RGRITILPSFEDCQV*KFPQEFGNALSGTG
Trigger: TCCTGTGCCTGACAAAGCATTACCAAACTCCTGTGGAAACTTCAAAACCTGACAGTCCTCAAAAGAAGGCAGGATAGTAATCCTGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS TCA 72 bp CTGGATTGTGAGCTGTCAAGGAAAGATGTAATTAGCTaGCGCCGCCCATCTTTGTTGAAAACCAGGGCCTTA +
Preference number: 6 (lower is better)
Translates to: LDCELSRKDVIS*RRPSLLKTRAL
Trigger: TAAGGCCCTGGTTTTCAACAAAGATGGGCGGCGTCAGCTAATTACATCTTTCCTTGACAGCTCACAATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
CDS TCA 72 bp CTGAGCTTCCCCTCAAACCTATCGAACATCTCATTGTaGTTGGGGACATTTGACACACAGGTTCCTTGTGCA +
Preference number: 6 (lower is better)
Translates to: LSFPSNLSNISL*LGTFDTQVPCA
Trigger: TGCACAAGGAACCTGTGTGTCAAATGTCCCCAATCACAATGAGATGTTCGATAGGTTTGAGGGGAAGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 72 bp CTGAGTAGCCAGGGTCACATATACATTTGGTTCCATTaGTACAGCTCCCCTGTCCATTACACATCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: LSSQGHIYIWFH*YSSPVHYTSPH
Trigger: GTGAGGAGATGTGTAATGGACAGGGGAGCTGTATCAATGGAACCAAATGTATATGTGACCCTGGCTACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681199.1
CDS TCA 72 bp GTACTCAATTTCCCTCCGTTCACAGTCAGCCAGTTCTaGCTGGATGGAGCTCGATTGAAGTTGTCTTTGAGT +
Preference number: 6 (lower is better)
Translates to: VLNFPPFTVSQF*LDGARLKLSLS
Trigger: ACTCAAAGACAACTTCAATCGAGCTCCATCCAGTCAGAACTGGCTGACTGTGAACGGAGGGAAATTGAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000679952.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS TCA 72 bp GATCTTGCATCCTTAGTGTATTCCAGCATTACGGAATaGAGGTCACCACAAGAAGTGGCTTCACAACCCACC +
Preference number: 6 (lower is better)
Translates to: DLASLVYSSITE*RSPQEVASQPT
Trigger: GGTGGGTTGTGAAGCCACTTCTTGTGGTGACCTTCATTCCGTAATGCTGGAATACACTAAGGATGCAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 72 bp ACAGTGACATCTGTTGGAGCTCCTTGTTCACACAACTaGTGGGCTAAAGCATCTTTGAAAATAACCTGGCCC +
Preference number: 6 (lower is better)
Translates to: TVTSVGAPCSHN*WAKASLKITWP
Trigger: GGGCCAGGTTATTTTCAAAGATGCTTTAGCCCAGCAGTTGTGTGAACAAGGAGCTCCAACAGATGTCACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681401.1
ENST00000681931.1
CDS GCA 72 bp AGAGTGCAGTGTCCTCGGCAAGAATTCCACACTCAGTaGAAGTACTTCCACCTTCTAAGGACATCCATAAGT +
Preference number: 6 (lower is better)
Translates to: RVQCPRQEFHTQ*KYFHLLRTSIS
Trigger: ACTTATGGATGTCCTTAGAAGGTGGAAGTACTTGCACTGAGTGTGGAATTCTTGCCGAGGACACTGCACTCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 72 bp TTCGTTTGTTTGTTTGTTTGTTTTGATCTGTTGGCCTaGTCAGAACTGGCACTGGACGGCCAGCAGAATGTG +
Preference number: 6 (lower is better)
Translates to: FVCLFVCFDLLA*SELALDGQQNV
Trigger: CACATTCTGCTGGCCGTCCAGTGCCAGTTCTGAGCAGGCCAACAGATCAAAACAAACAAACAAACAAACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478148.2
ENST00000681364.1
CDS GCA 72 bp GGGACAAATGGATGGGTTGGCTTGGTAGTTTTTCACTaGAAGACACATCAATCTTTGTGCGCTCCATCTGTC +
Preference number: 6 (lower is better)
Translates to: GTNGWVGLVVFH*KTHQSLCAPSV
Trigger: GACAGATGGAGCGCACAAAGATTGATGTGTCTTGCAGTGAAAAACTACCAAGCCAACCCATCCATTTGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680712.1
CDS GCA 72 bp CCTTTGCACCTGCTGTTCTTTCCTTTGGGTATGCTGTaGCCCACCATCCACAGACCTTTAGTTAATAATCTC +
Preference number: 6 (lower is better)
Translates to: PLHLLFFPLGML*PTIHRPLVNNL
Trigger: GAGATTATTAACTAAAGGTCTGTGGATGGTGGGGCACAGCATACCCAAAGGAAAGAACAGCAGGTGCAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS CCA 72 bp CACAACTGCTGGGCTAAAGCATCTTTGAAAATAACCTaGCCCCGGTGTGTTGCTGTAGCCATGAAATTCACA +
Preference number: 6 (lower is better)
Translates to: HNCWAKASLKIT*PRCVAVAMKFT
Trigger: TGTGAATTTCATGGCTACAGCAACACACCGGGGCCAGGTTATTTTCAAAGATGCTTTAGCCCAGCAGTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681401.1
ENST00000681931.1
CDS CCA 72 bp ATTAAGGCCTGTGGTAATCAGTTCTCGTGGGCCATATaGTTCACAGAAGGTGACGGCATTGCCATGCATAAT +
Preference number: 6 (lower is better)
Translates to: IKACGNQFSWAI*FTEGDGIAMHN
Trigger: ATTATGCATGGCAATGCCGTCACCTTCTGTGAACCATATGGCCCACGAGAACTGATTACCACAGGCCTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681931.1
CDS CCA 72 bp TTGTCCATTCTTCAAAGTCCCCTGTGTGATACATGGTaGGCTCACTTAGTTCTCTGGAGTTTCCTTCGCATC +
Preference number: 6 (lower is better)
Translates to: LSILQSPLCDTW*AHLVLWSFLRI
Trigger: GATGCGAAGGAAACTCCAGAGAACTAAGTGAGCCCACCATGTATCACACAGGGGACTTTGAAGAATGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CCA 72 bp TTCTTGTCCATTCTTCAAAGTCCCCTGTGTGATACATaGTGGGCTCACTTAGTTCTCTGGAGTTTCCTTCGC +
Preference number: 6 (lower is better)
Translates to: FLSILQSPLCDT*WAHLVLWSFLR
Trigger: GCGAAGGAAACTCCAGAGAACTAAGTGAGCCCACCATGTATCACACAGGGGACTTTGAAGAATGGACAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CCA 72 bp CCTTTTTCGTTTGTTTGTTTGTTTGTTTTGATCTGTTaGCCTGCTCAGAACTGGCACTGGACGGCCAGCAGA +
Preference number: 6 (lower is better)
Translates to: PFSFVCLFVLIC*PAQNWHWTASR
Trigger: TCTGCTGGCCGTCCAGTGCCAGTTCTGAGCAGGCCAACAGATCAAAACAAACAAACAAACAAACGAAAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000478148.2
ENST00000681364.1
CDS CCA 72 bp ACATCAGCCAATGACTCATCTGGGCAGGGCTACTGCTaGGACTTGACACTTCATATATCAAAAGGAGGTAGA +
Preference number: 6 (lower is better)
Translates to: TSANDSSGQGYC*DLTLHISKGGR
Trigger: TCTACCTCCTTTTGATATATGAAGTGTCAAGTCCCAGCAGTAGCCCTGCCCAGATGAGTCATTGGCTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS CCA 72 bp TTTGCAGAGCAAGGTTTAATCACCTCTGCTCATCACTaGTCCAGGCTAATTACCTCTCACTGCAGGATCAGA +
Preference number: 6 (lower is better)
Translates to: FAEQGLITSAHH*SRLITSHCRIR
Trigger: TCTGATCCTGCAGTGAGAGGTAATTAGCCTGGACCAGTGATGAGCAGAGGTGATTAAACCTTGCTCTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681921.1
CDS CAA 72 bp TTCACCTACACGAAGATTTTCCTGCTTCCACTGAAATaGGACATTCTCCCCTTTGGCGTCCTCAGGAAGGTA +
Preference number: 6 (lower is better)
Translates to: FTYTKIFLLPLK*DILPFGVLRKV
Trigger: TACCTTCCTGAGGACGCCAAAGGGGAGAATGTCCAATTTCAGTGGAAGCAGGAAAATCTTCGTGTAGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681931.1
CDS CAA 72 bp CTTTGCACCTCGAAGATCCAAATCTTGTGTAACCGCTaGTCTCACAGTGGATCCCCCAAAATAGAGTGCAGT +
Preference number: 6 (lower is better)
Translates to: LCTSKIQILCNR*SHSGSPKIECS
Trigger: ACTGCACTCTATTTTGGGGGATCCACTGTGAGACAAGCGGTTACACAAGATTTGGATCTTCGAGGTGCAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CAA 72 bp GTATTGCAGGAACTTTGCACCTCGAAGATCCAAATCTaGTGTAACCGCTTGTCTCACAGTGGATCCCCCAAA +
Preference number: 6 (lower is better)
Translates to: VLQELCTSKIQI*CNRLSHSGSPK
Trigger: TTTGGGGGATCCACTGTGAGACAAGCGGTTACACAAGATTTGGATCTTCGAGGTGCAAAGTTCCTGCAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CAA 72 bp ACTGTTGCAGCTGTCCGTCTGCGACATGCTCCCAATTaGCAAAACAAACATGATTTTGCTTGCTCGAGTGAG +
Preference number: 6 (lower is better)
Translates to: TVAAVRLRHAPN*QNKHDFACSSE
Trigger: CTCACTCGAGCAAGCAAAATCATGTTTGTTTTGCAAATTGGGAGCATGTCGCAGACGGACAGCTGCAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473945.1
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CAA 90 bp TTCATACACTTCACCTACACGAAGATTTTCCTGCTTCCACTGAAATaGGACATTCTCCCCTTTGGCGTCCTCAGGAAGGTAGAGGATATG +
Preference number: 6 (lower is better)
Translates to: FIHFTYTKIFLLPLK*DILPFGVLRKVEDM
Trigger: CATATCCTCTACCTTCCTGAGGACGCCAAAGGGGAGAATGTCCAATTTCAGTGGAAGCAGGAAAATCTTCGTGTAGGTGAAGTGTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681931.1
CDS CAA 90 bp CTCATCAATAGCCCATACATCTTCTCTCTGGGAAGAATGATACGGTaGCCACCATCTGAACTGAATTCCAAACTGCTTTGCATCACCTGG +
Preference number: 6 (lower is better)
Translates to: LINSPYIFSLGRMIR*PPSELNSKLLCITW
Trigger: CCAGGTGATGCAAAGCAGTTTGGAATTCAGTTCAGATGGTGGCAACCGTATCATTCTTCCCAGAGAGAAGATGTATGGGCTATTGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 72 bp TGTCACTATGTATTTCAGCTAGATGTGGGTGCACAGTaGCATCTGTTGGAGCTCCTTGTTCACACAACTGCT +
Preference number: 6 (lower is better)
Translates to: CHYVFQLDVGAQ*HLLELLVHTTA
Trigger: AGCAGTTGTGTGAACAAGGAGCTCCAACAGATGTCACTGTGCACCCACATCTAGCTGAAATACATAGTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681401.1
ENST00000681931.1
CDS TCA 72 bp CTTCTCTCTGGGAAGAATGATACGGTTGCCACCATCTaGACTGAATTCCAAACTGCTTTGCATCACCTGGTA +
Preference number: 6 (lower is better)
Translates to: LLSGKNDTVATI*TEFQTALHHLV
Trigger: TACCAGGTGATGCAAAGCAGTTTGGAATTCAGTTCAGATGGTGGCAACCGTATCATTCTTCCCAGAGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 72 bp GTGGGGTGTATTTCTGGCCACATCCCATCACCAAACTaGACTGAATCATATAGGATGCTCCTATCTGCATTG +
Preference number: 6 (lower is better)
Translates to: VGCISGHIPSPN*TESYRMLLSAL
Trigger: CAATGCAGATAGGAGCATCCTATATGATTCAGTTCAGTTTGGTGATGGGATGTGGCCAGAAATACACCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 72 bp GCCCATGCTCATTTCAAACTGCAAAAAGGTAGATGCTaGCACATGAAAATCCCAGGTCTCAGCATAACGAGG +
Preference number: 6 (lower is better)
Translates to: AHAHFKLQKGRC*HMKIPGLSITR
Trigger: CCTCGTTATGCTGAGACCTGGGATTTTCATGTGTCAGCATCTACCTTTTTGCAGTTTGAAATGAGCATGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 72 bp CCGCTTCCAATTCTGGAATCTTTCCGAGGTGTAAATTaGACTTTCCGTGTAATGCAGACAGCCAATGGTTGG +
Preference number: 6 (lower is better)
Translates to: PLPILESFRGVN*TFRVMQTANGW
Trigger: CCAACCATTGGCTGTCTGCATTACACGGAAAGTTCAATTTACACCTCGGAAAGATTCCAGAATTGGAAGCGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 72 bp GCCCAGGTAGAAATTATCGATTGCCCACTGCATGTCTaGGTACTTCTGATAGAACCTAAACCTTACCGGACT +
Preference number: 6 (lower is better)
Translates to: AQVEIIDCPLHV*VLLIEPKPYRT
Trigger: AGTCCGGTAAGGTTTAGGTTCTATCAGAAGTACTCAGACATGCAGTGGGCAATCGATAATTTCTACCTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679371.1
ENST00000681921.1
CDS GCA 72 bp GGTAAAGTTGGATTGATAACTGGGATGATCTGCTTCTaGTTCTCGGACAGAATGATGATGTCATCGACTGCC +
Preference number: 6 (lower is better)
Translates to: GKVGLITGMICF*FSDRMMMSSTA
Trigger: GGCAGTCGATGACATCATCATTCTGTCCGAGAAGCAGAAGCAGATCATCCCAGTTATCAATCCAACTTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS GCA 72 bp TCCACATTGGTAGGCAGACAGTCCCTTACCAATGGGTaGCATGACAATCCAAGATCTACTGAGTATTCCAAT +
Preference number: 6 (lower is better)
Translates to: STLVGRQSLTNG*HDNPRSTEYSN
Trigger: ATTGGAATACTCAGTAGATCTTGGATTGTCATGGCACCCATTGGTAAGGGACTGTCTGCCTACCAATGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681315.1
ENST00000681364.1
CDS GCA 72 bp ACTTCCTATGACTCCACCTTGAATGGTCTCCCAGTTTaGCTCGGTGACTCTTGCGGACTCAAAATTATCTTT +
Preference number: 6 (lower is better)
Translates to: TSYDSTLNGLPV*LGDSCGLKIIF
Trigger: AAAGATAATTTTGAGTCCGCAAGAGTCACCGAGGCAAACTGGGAGACCATTCAAGGTGGAGTCATAGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 72 bp CATGGAATGACACCAGAGCTGCTGCTAACTTGTAAGTaGAAAATCAGAAAAGATGACTATCTCCGAGCAGCC +
Preference number: 6 (lower is better)
Translates to: HGMTPELLLTCK*KIRKDDYLRAA
Trigger: GGCTGCTCGGAGATAGTCATCTTTTCTGATTTTGCACTTACAAGTTAGCAGCAGCTCTGGTGTCATTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679952.1
CDS GCA 72 bp CTGTCATACCCTTTCCCAGCACTCAGTACACTTCTTTaGCAGCCCCTAGCAAGGTTTGCTATGACATATTTA +
Preference number: 6 (lower is better)
Translates to: LSYPFPALSTLL*QPLARFAMTYL
Trigger: TAAATATGTCATAGCAAACCTTGCTAGGGGCTGGCAAAGAAGTGTACTGAGTGCTGGGAAAGGGTATGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS CCA 72 bp CCAATAACTTCTTGCCAGTCAGACTCCCAGCCATTCTaGTTCTCAAAATCTGACATAATTGTGGACGGAAGG +
Preference number: 6 (lower is better)
Translates to: PITSCQSDSQPF*FSKSDIIVDGR
Trigger: CCTTCCGTCCACAATTATGTCAGATTTTGAGAACCAGAATGGCTGGGAGTCTGACTGGCAAGAAGTTATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CCA 72 bp TGGTTTGTGAGAATAGCTTACCAAATCCGAAAGCACTaGAACCTCCAATGCTCTGTGATGCCTGAACACTTG +
Preference number: 6 (lower is better)
Translates to: WFVRIAYQIRKH*NLQCSVMPEHL
Trigger: CAAGTGTTCAGGCATCACAGAGCATTGGAGGTTCCAGTGCTTTCGGATTTGGTAAGCTATTCTCACAAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS CAA 90 bp CCGGTAGTGTCCATGGATGGAGTGCATAATTTCCTCTCTCCATCTTaGAGGAAGACCATTGATAAGCCTGATTCTATCGTTCCACATTCT +
Preference number: 6 (lower is better)
Translates to: PVVSMDGVHNFLSPS*RKTIDKPDSIVPHS
Trigger: AGAATGTGGAACGATAGAATCAGGCTTATCAATGGTCTTCCTCAAAGATGGAGAGAGGAAATTATGCACTCCATCCATGGACACTACCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681931.1
CDS CAA 90 bp TCTGCACCATACACTTCAGGCCAAAGGTCAGGATGTAAATTCCCATaGAAATCGTCTTTAAGAATCGAGGGCAGAGGAACAACAGGAACA +
Preference number: 6 (lower is better)
Translates to: SAPYTSGQRSGCKFP*KSSLRIEGRGTTGT
Trigger: TGTTCCTGTTGTTCCTCTGCCCTCGATTCTTAAAGACGATTTCAATGGGAATTTACATCCTGACCTTTGGCCTGAAGTGTATGGTGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 90 bp AAGAAATGGAAAGTTCTGCCTTTTTCGTTTGTTTGTTTGTTTGTTTaGATCTGTTGGCCTGCTCAGAACTGGCACTGGACGGCCAGCAGA +
Preference number: 6 (lower is better)
Translates to: KKWKVLPFSFVCLFV*ICWPAQNWHWTASR
Trigger: TCTGCTGGCCGTCCAGTGCCAGTTCTGAGCAGGCCAACAGATCAAAACAAACAAACAAACAAACGAAAAAGGCAGAACTTTCCATTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478148.2
ENST00000681364.1
CDS CAA 90 bp TGCTTCAGAGAAGATCAGAAAGTCAAATCGATTGCTCACATGTGGTaGTTAATAAAACTCCTATGGTGCTGCTCAAGGTGCCCATGGGGA +
Preference number: 6 (lower is better)
Translates to: CFREDQKVKSIAHMW*LIKLLWCCSRCPWG
Trigger: TCCCCATGGGCACCTTGAGCAGCACCATAGGAGTTTTATTAACAACCACATGTGAGCAATCGATTTGACTTTCTGATCTTCTCTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473457.2
CDS CAA 90 bp GAGGACTGTCAGGTTTTGAAGTTTCCACAGGAGTTTGGTAATGCTTaGTCAGGCACAGGAAGCCCCATTAATGCAAATTGTATTGGCAAG +
Preference number: 6 (lower is better)
Translates to: EDCQVLKFPQEFGNA*SGTGSPINANCIGK
Trigger: CTTGCCAATACAATTTGCATTAATGGGGCTTCCTGTGCCTGACAAAGCATTACCAAACTCCTGTGGAAACTTCAAAACCTGACAGTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS TCA 72 bp GTAGGCTGGCTCTCAAATTCTTCTGACCATTGCTCTTaGATATCTTCTGTGGAAAGATCTACATCCCTGGTG +
Preference number: 6 (lower is better)
Translates to: VGWLSNSSDHCS*ISSVERSTSLV
Trigger: CACCAGGGATGTAGATCTTTCCACAGAAGATATTCAAGAGCAATGGTCAGAAGAATTTGAGAGCCAGCCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681931.1
CDS TCA 72 bp AAACCTATCGAACATCTCATTGTGATTGGGGACATTTaGCACACAGGTTCCTTGTGCAGCAGTATATCCCAG +
Preference number: 6 (lower is better)
Translates to: KPIEHLIVIGDI*HTGSLCSSISQ
Trigger: CTGGGATATACTGCTGCACAAGGAACCTGTGTGTCAAATGTCCCCAATCACAATGAGATGTTCGATAGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 72 bp GCCCAGGTAGAAATTATCGATTGCCCACTGCATGTCTaGGTACTTCTGATAGAACCTAAACCTTACCGGATT +
Preference number: 6 (lower is better)
Translates to: AQVEIIDCPLHV*VLLIEPKPYRI
Trigger: AATCCGGTAAGGTTTAGGTTCTATCAGAAGTACTCAGACATGCAGTGGGCAATCGATAATTTCTACCTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS CCA 72 bp ATAAACATTATCAATTGCCCACATGTTTCCAAGGATTaGTCCTGTTTGTCTCCAGCGAATCCTGGTGTTCCG +
Preference number: 6 (lower is better)
Translates to: INIINCPHVSKD*SCLSPANPGVP
Trigger: CGGAACACCAGGATTCGCTGGAGACAAACAGGACCAATCCTTGGAAACATGTGGGCAATTGATAATGTTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681931.1
CDS CCA 72 bp GATCCTTTTCCACCCTTTAGTTGGAAAGAATACAGATaGCTGAGAAACACTTCCAGAGCATTTTGGGTCAGC +
Preference number: 6 (lower is better)
Translates to: DPFPPFSWKEYR*LRNTSRAFWVS
Trigger: GCTGACCCAAAATGCTCTGGAAGTGTTTCTCAGCCATCTGTATTCTTTCCAACTAAAGGGTGGAAAAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CCA 72 bp AGGAAGTGGGTAGGTGATCCTTTTCCACCCTTTAGTTaGAAAGAATACAGATGGCTGAGAAACACTTCCAGA +
Preference number: 6 (lower is better)
Translates to: RKWVGDPFPPFS*KEYRWLRNTSR
Trigger: TCTGGAAGTGTTTCTCAGCCATCTGTATTCTTTCCAACTAAAGGGTGGAAAAGGATCACCTACCCACTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CCA 72 bp TCGATTGCTCACATGTGGTTGTTAATAAAACTCCTATaGTGCTGCTCAAGGTGCCCATGGGGATTGTACAAT +
Preference number: 6 (lower is better)
Translates to: SIAHMWLLIKLL*CCSRCPWGLYN
Trigger: ATTGTACAATCCCCATGGGCACCTTGAGCAGCACCATAGGAGTTTTATTAACAACCACATGTGAGCAATCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473457.2
CDS CAA 72 bp CAGAGCAGTATCCATAGAGAGACAGTCAATATCAACTaGACCTCCTTGGATTCGATACCAGTTGGCTTGCAA +
Preference number: 6 (lower is better)
Translates to: QSSIHRETVNIN*TSLDSIPVGLQ
Trigger: TTGCAAGCCAACTGGTATCGAATCCAAGGAGGTCAAGTTGATATTGACTGTCTCTCTATGGATACTGCTCTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 72 bp TCCGCTTCCAATTCTGGAATCTTTCCGAGGTGTAAATaGAACTTTCCGTGTAATGCAGACAGCCAATGGTTG +
Preference number: 6 (lower is better)
Translates to: SASNSGIFPRCK*NFPCNADSQWL
Trigger: CAACCATTGGCTGTCTGCATTACACGGAAAGTTCAATTTACACCTCGGAAAGATTCCAGAATTGGAAGCGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 72 bp GCCAATGACTCATCTGGGCAGGGCTACTGCTGGGACTaGACACTTCATATATCAAAAGGAGGTAGAAAATTT +
Preference number: 6 (lower is better)
Translates to: ANDSSGQGYCWD*TLHISKGGRKF
Trigger: AAATTTTCTACCTCCTTTTGATATATGAAGTGTCAAGTCCCAGCAGTAGCCCTGCCCAGATGAGTCATTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS CAA 90 bp TCTCGTGTCATCAACATGCGCAAGCCATCTTCATTGAAAAAGAGGTaGTTTCCACTAGAAAGGATTCCACACTTTCGAGATGGTTTCCCA +
Preference number: 6 (lower is better)
Translates to: SRVINMRKPSSLKKR*FPLERIPHFRDGFP
Trigger: TGGGAAACCATCTCGAAAGTGTGGAATCCTTTCTAGTGGAAACAACCTCTTTTTCAATGAAGATGGCTTGCGCATGTTGATGACACGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
CDS CAA 90 bp GGTTGGGCTTTCTGTATATCTCGAAATACACACCAAAGCTTGGATTaGCACACAATAATACCTCCCTTTCTCTCTCAGATATGCACAGGC +
Preference number: 6 (lower is better)
Translates to: GWAFCISRNTHQSLD*HTIIPPFLSQICTG
Trigger: GCCTGTGCATATCTGAGAGAGAAAGGGAGGTATTATTGTGTGCAAATCCAAGCTTTGGTGTGTATTTCGAGATATACAGAAAGCCCAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681199.1
CDS TCA 72 bp AGAGCAGTATCCATAGAGAGACAGTCAATATCAACTTaGCCTCCTTGGATTCGATACCAGTTGGCTTGCAAA +
Preference number: 6 (lower is better)
Translates to: RAVSIERQSIST*PPWIRYQLACK
Trigger: TTTGCAAGCCAACTGGTATCGAATCCAAGGAGGTCAAGTTGATATTGACTGTCTCTCTATGGATACTGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 72 bp CTTCATCATCAAAAGTGTCCACCAATTGGCTGGGATTaGTTTCTGCTCCACCAATCAAAATGTTGTCCAGTG +
Preference number: 6 (lower is better)
Translates to: LHHQKCPPIGWD*FLLHQSKCCPV
Trigger: CACTGGACAACATTTTGATTGGTGGAGCAGAAATCAATCCCAGCCAATTGGTGGACACTTTTGATGATGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS TCA 72 bp TGGGTCCCCAGCATCCATTTCACCCCAGATAATCCATaGAATAATCATTTCCTAACTCAACTATTGAGTGGC +
Preference number: 6 (lower is better)
Translates to: WVPSIHFTPDNP*NNHFLTQLLSG
Trigger: GCCACTCAATAGTTGAGTTAGGAAATGATTATTTCATGGATTATCTGGGGTGAAATGGATGCTGGGGACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681921.1
CDS GCA 72 bp CCAATAGAGGTGAAAGGATGGATTGCCACAAAATCCTaGTGTCCTTACAGCATTAGGGTAAAAACTCCAGTT +
Preference number: 6 (lower is better)
Translates to: PIEVKGWIATKS*CPYSIRVKTPV
Trigger: AACTGGAGTTTTTACCCTAATGCTGTAAGGACAGCAGGATTTTGTGGCAATCCATCCTTTCACCTCTATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS GCA 72 bp GGAACGCCTTTACCACATCCCAGTCTCATGAAGAACTaGACAAATCTGACATTTGTAAACGTTACTGAAGAC +
Preference number: 6 (lower is better)
Translates to: GTPLPHPSLMKN*TNLTFVNVTED
Trigger: GTCTTCAGTAACGTTTACAAATGTCAGATTTGTGCAGTTCTTCATGAGACTGGGATGTGGTAAAGGCGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681315.1
CDS CCA 72 bp ACAACCCACCACAATTTTAAACTGCATCATGTATCCTaGCTGTATAATGAGTTCTCGGGAGGAGAGAGCATT +
Preference number: 6 (lower is better)
Translates to: TTHHNFKLHHVS*LYNEFSGGESI
Trigger: AATGCTCTCTCCTCCCGAGAACTCATTATACAGCCAGGATACATGATGCAGTTTAAAATTGTGGTGGGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CCA 72 bp AAGGTTCTTTGGGTGATGATAAAAATCAAGTCAAGCTaGCTTGGGCTGCAAAGGGAGTTTAATGACAGGTTG +
Preference number: 6 (lower is better)
Translates to: KVLWVMIKIKSS*LGLQREFNDRL
Trigger: CAACCTGTCATTAAACTCCCTTTGCAGCCCAAGCCAGCTTGACTTGATTTTTATCATCACCCAAAGAACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS CCA 72 bp CAAATGATCAGAAGTCAGTGGGACAAATGGATGGGTTaGCTTGGTAGTTTTTCACTGCAAGACACATCAATC +
Preference number: 6 (lower is better)
Translates to: QMIRSQWDKWMG*LGSFSLQDTSI
Trigger: GATTGATGTGTCTTGCAGTGAAAAACTACCAAGCCAACCCATCCATTTGTCCCACTGACTTCTGATCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680712.1
CDS CAA 72 bp TTGTTCTGGTTTTACAATTTCTCCCCCAATAACTTCTaGCCAGTCAGACTCCCAGCCATTCTGGTTCTCAAA +
Preference number: 6 (lower is better)
Translates to: LFWFYNFSPNNF*PVRLPAILVLK
Trigger: TTTGAGAACCAGAATGGCTGGGAGTCTGACTGGCAAGAAGTTATTGGGGGAGAAATTGTAAAACCAGAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 72 bp TACACTTCAGGCCAAAGGTCAGGATGTAAATTCCCATaGAAATCGTCTTTAAGAATCGAGGGCAGAGGAACA +
Preference number: 6 (lower is better)
Translates to: YTSGQRSGCKFP*KSSLRIEGRGT
Trigger: TGTTCCTCTGCCCTCGATTCTTAAAGACGATTTCAATGGGAATTTACATCCTGACCTTTGGCCTGAAGTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 72 bp CCTTCATCATCAAAAGTGTCCACCAATTGGCTGGGATaGATTTCTGCTCCACCAATCAAAATGTTGTCCAGT +
Preference number: 6 (lower is better)
Translates to: PSSSKVSTNWLG*ISAPPIKMLSS
Trigger: ACTGGACAACATTTTGATTGGTGGAGCAGAAATCAATCCCAGCCAATTGGTGGACACTTTTGATGATGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CAA 72 bp AAAGTTCTGCCTTTTTCGTTTGTTTGTTTGTTTGTTTaGATCTGTTGGCCTGCTCAGAACTGGCACTGGACG +
Preference number: 6 (lower is better)
Translates to: KVLPFSFVCLFV*ICWPAQNWHWT
Trigger: CGTCCAGTGCCAGTTCTGAGCAGGCCAACAGATCAAAACAAACAAACAAACAAACGAAAAAGGCAGAACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000478148.2
ENST00000681364.1
CDS CAA 72 bp CAGGATCCCACCACTAGAATTTCTGATTCACTGTGTTaGAAGTCTACAATTCTGCAGTTACTGCTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: QDPTTRISDSLC*KSTILQLLLSR
Trigger: CCTGGAAAGCAGTAACTGCAGAATTGTAGACTTCAAACACAGTGAATCAGAAATTCTAGTGGTGGGATCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS CAA 72 bp GGTACACCTTTTCATCTGGCTCCAAGGCCATCACTATaGCTCTGTTCCCATTTTAAGATACTGAGGTTTAGA +
Preference number: 6 (lower is better)
Translates to: GTPFHLAPRPSL*LCSHFKILRFR
Trigger: TCTAAACCTCAGTATCTTAAAATGGGAACAGAGCAATAGTGATGGCCTTGGAGCCAGATGAAAAGGTGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681921.1
CDS CAA 72 bp CAGGTTTTGAAGTTTCCACAGGAGTTTGGTAATGCTTaGTCAGGCACAGGAAGCCCCATTAATGCAAATTGT +
Preference number: 6 (lower is better)
Translates to: QVLKFPQEFGNA*SGTGSPINANC
Trigger: ACAATTTGCATTAATGGGGCTTCCTGTGCCTGACAAAGCATTACCAAACTCCTGTGGAAACTTCAAAACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS CAA 90 bp CAGAGCAGTATCCATAGAGAGACAGTCAATATCAACTTGACCTCCTaGGATTCGATACCAGTTGGCTTGCAAATCTATAGAGCCATCAAA +
Preference number: 6 (lower is better)
Translates to: QSSIHRETVNINLTS*DSIPVGLQIYRAIK
Trigger: TTTGATGGCTCTATAGATTTGCAAGCCAACTGGTATCGAATCCAAGGAGGTCAAGTTGATATTGACTGTCTCTCTATGGATACTGCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 90 bp TCAGTGCAAGTACTTCCACCTTCTAAGGACATCCATAAGTCAGGTTaGATTTCTTCACTGTCAAAGCGTTCCTTCAGGAAAGTCTTCAGA +
Preference number: 6 (lower is better)
Translates to: SVQVLPPSKDIHKSG*ISSLSKRSFRKVFR
Trigger: TCTGAAGACTTTCCTGAAGGAACGCTTTGACAGTGAAGAAATCAAACCTGACTTATGGATGTCCTTAGAAGGTGGAAGTACTTGCACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS TCA 72 bp ACTGGGTCGAGACTATCTTCTAAAACGACTTGTCTGTaGGCTGAATTGATGATCAAGATGTTATCTAAGGCC +
Preference number: 6 (lower is better)
Translates to: TGSRLSSKTTCL*AELMIKMLSKA
Trigger: GGCCTTAGATAACATCTTGATCATCAATTCAGCTCACAGACAAGTCGTTTTAGAAGATAGTCTCGACCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681931.1
CDS TCA 72 bp ATCACATTTGGGCTCACTATACGTAGAAGCATGTGGTaGACATGTAGAAGCATTCTTACCTGGTATAAGGAG +
Preference number: 6 (lower is better)
Translates to: ITFGLTIRRSMW*TCRSILTWYKE
Trigger: CTCCTTATACCAGGTAAGAATGCTTCTACATGTTCACCACATGCTTCTACGTATAGTGAGCCCAAATGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681315.1
CDS TCA 72 bp CTTTCCAACATACCTGGGCTCATGATAGCTGAGATATaGATAATGCTCCAGGAGTTTCCAAGTTATCCCATT +
Preference number: 6 (lower is better)
Translates to: LSNIPGLMIAEI*IMLQEFPSYPI
Trigger: AATGGGATAACTTGGAAACTCCTGGAGCATTATTCATATCTCAGCTATCATGAGCCCAGGTATGTTGGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680712.1
CDS TCA 72 bp CCAAATGCTTTCCAACATACCTGGGCTCATGATAGCTaGGATATGAATAATGCTCCAGGAGTTTCCAAGTTA +
Preference number: 6 (lower is better)
Translates to: PNAFQHTWAHDS*DMNNAPGVSKL
Trigger: TAACTTGGAAACTCCTGGAGCATTATTCATATCTCAGCTATCATGAGCCCAGGTATGTTGGAAAGCATTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680712.1
CDS TCA 72 bp ATTCCTCCACTGATGGAGAATTGTAACAGAATAGAGTaGGATCTCTCTGGGGTACCTAGGAAGAAGATAACA +
Preference number: 6 (lower is better)
Translates to: IPPLMENCNRIE*DLSGVPRKKIT
Trigger: TGTTATCTTCTTCCTAGGTACCCCAGAGAGATCTCACTCTATTCTGTTACAATTCTCCATCAGTGGAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681199.1
CDS TCA 72 bp TTACTATCCTGCCTTCTTTTGAGGACTGTCAGGTTTTaGAGTTTCCACAGGAGTTTGGTAATGCTTTGTCAG +
Preference number: 6 (lower is better)
Translates to: LLSCLLLRTVRF*SFHRSLVMLCQ
Trigger: CTGACAAAGCATTACCAAACTCCTGTGGAAACTTCAAAACCTGACAGTCCTCAAAAGAAGGCAGGATAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS TCA 72 bp GACTTAGACACGTACACAGGAAATGTGATGTGTGAATaGAATGCGAATTGGGTGAGGGAGATTCTTAGGATA +
Preference number: 6 (lower is better)
Translates to: DLDTYTGNVMCE*NANWVREILRI
Trigger: TATCCTAAGAATCTCCCTCACCCAATTCGCATTTCATTCACACATCACATTTCCTGTGTACGTGTCTAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679867.1
CDS GCA 72 bp CAAGAGAGAGGAAAAGTCAACATCAGACAAAGCCCCTaGAAGCTTGTTCTCAAATTAGTGAAGACTACTCTT +
Preference number: 6 (lower is better)
Translates to: QERGKVNIRQSP*KLVLKLVKTTL
Trigger: AAGAGTAGTCTTCACTAATTTGAGAACAAGCTTGCAGGGGCTTTGTCTGATGTTGACTTTTCCTCTCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000478148.2
ENST00000680248.1
CDS GCA 72 bp GCTCACATGTGGTTGTTAATAAAACTCCTATGGTGCTaGTCAAGGTGCCCATGGGGATTGTACAATTATTTA +
Preference number: 6 (lower is better)
Translates to: AHMWLLIKLLWC*SRCPWGLYNYL
Trigger: TAAATAATTGTACAATCCCCATGGGCACCTTGAGCAGCACCATAGGAGTTTTATTAACAACCACATGTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473457.2
CDS GCA 72 bp ATTGCTCACATGTGGTTGTTAATAAAACTCCTATGGTaGTGCTCAAGGTGCCCATGGGGATTGTACAATTAT +
Preference number: 6 (lower is better)
Translates to: IAHMWLLIKLLW*CSRCPWGLYNY
Trigger: ATAATTGTACAATCCCCATGGGCACCTTGAGCAGCACCATAGGAGTTTTATTAACAACCACATGTGAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473457.2
CDS CCA 72 bp TGTTACCACCAGGATAGAAAAACCAATTGTCTTCTCTaGGCCCAAAATCAAATGTATCCAAGAGCATCACAG +
Preference number: 6 (lower is better)
Translates to: CYHQDRKTNCLL*AQNQMYPRASQ
Trigger: CTGTGATGCTCTTGGATACATTTGATTTTGGGCCCAGAGAAGACAATTGGTTTTTCTATCCTGGTGGTAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000681034.1
ENST00000681199.1
CDS CCA 72 bp GTCCTTCTTTTTATTTGGCCAATAGAGGTGAAAGGATaGATTGCCACAAAATCCTGCTGTCCTTACAGCATT +
Preference number: 6 (lower is better)
Translates to: VLLFIWPIEVKG*IATKSCCPYSI
Trigger: AATGCTGTAAGGACAGCAGGATTTTGTGGCAATCCATCCTTTCACCTCTATTGGCCAAATAAAAAGAAGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679371.1
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
ENST00000681921.1
CDS CCA 72 bp GAAAACAGACTCTGTTTCAGTCTATTCTGTATCCAATaGGCCTATTTTAAACGACTTGTCTGGGCATCTCTG +
Preference number: 6 (lower is better)
Translates to: ENRLCFSLFCIQ*AYFKRLVWASL
Trigger: CAGAGATGCCCAGACAAGTCGTTTAAAATAGGCCCATTGGATACAGAATAGACTGAAACAGAGTCTGTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681315.1
CDS CCA 72 bp AAATTCCTTCAAATGATCAGAAGTCAGTGGGACAAATaGATGGGTTGGCTTGGTAGTTTTTCACTGCAAGAC +
Preference number: 6 (lower is better)
Translates to: KFLQMIRSQWDK*MGWLGSFSLQD
Trigger: GTCTTGCAGTGAAAAACTACCAAGCCAACCCATCCATTTGTCCCACTGACTTCTGATCATTTGAAGGAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680712.1
CDS CCA 72 bp TGGCTCTGTCTATCATGGATTGATAAGGCAATAATGTaGAAAGTATATAGTGCACAGAGGTCCACAGTCTAC +
Preference number: 6 (lower is better)
Translates to: WLCLSWIDKAIM*KVYSAQRSTVY
Trigger: GTAGACTGTGGACCTCTGTGCACTATATACTTTCCACATTATTGCCTTATCAATCCATGATAGACAGAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681921.1
CDS CAA 72 bp TCCATGGATGGAGTGCATAATTTCCTCTCTCCATCTTaGAGGAAGACCATTGATAAGCCTGATTCTATCGTT +
Preference number: 6 (lower is better)
Translates to: SMDGVHNFLSPS*RKTIDKPDSIV
Trigger: AACGATAGAATCAGGCTTATCAATGGTCTTCCTCAAAGATGGAGAGAGGAAATTATGCACTCCATCCATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681931.1
CDS CAA 72 bp GAAGATCAGAAAGTCAAATCGATTGCTCACATGTGGTaGTTAATAAAACTCCTATGGTGCTGCTCAAGGTGC +
Preference number: 6 (lower is better)
Translates to: EDQKVKSIAHMW*LIKLLWCCSRC
Trigger: GCACCTTGAGCAGCACCATAGGAGTTTTATTAACAACCACATGTGAGCAATCGATTTGACTTTCTGATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473457.2
CDS CAA 72 bp TGTCAGGCACAGGAAGCCCCATTAATGCAAATTGTATaGGCAAGCCACTTGAAAGATAAGAAGTGGTTATTG +
Preference number: 6 (lower is better)
Translates to: CQAQEAPLMQIV*ASHLKDKKWLL
Trigger: CAATAACCACTTCTTATCTTTCAAGTGGCTTGCCAATACAATTTGCATTAATGGGGCTTCCTGTGCCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS CAA 90 bp AAAGTCTACAGCCCAGACATTCCTATTATGTCCTTGATGGTTCTTTaGCCTGAGACAAAATTTGGTAGCAGGAGTCTGAAGTTCAGGATT +
Preference number: 6 (lower is better)
Translates to: KVYSPDIPIMSLMVL*PETKFGSRSLKFRI
Trigger: AATCCTGAACTTCAGACTCCTGCTACCAAATTTTGTCTCAGGCAAAAGAACCATCAAGGACATAATAGGAATGTCTGGGCTGTAGACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681931.1
CDS CAA 90 bp GGCAGTGTATGGCAAGGGAACATTGATGAAAAGTATATTCGTTGTTaGAGGAAAGTAAAATTCATCCATCAGGTGCCAAGTGATTCCTCC +
Preference number: 6 (lower is better)
Translates to: GSVWQGNIDEKYIRC*RKVKFIHQVPSDSS
Trigger: GGAGGAATCACTTGGCACCTGATGGATGAATTTTACTTTCCTCAAACAACGAATATACTTTTCATCAATGTTCCCTTGCCATACACTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000681034.1
ENST00000681199.1
CDS CAA 90 bp CTGACATCAGCCAATGACTCATCTGGGCAGGGCTACTGCTGGGACTaGACACTTCATATATCAAAAGGAGGTAGAAAATTTATTTATTTG +
Preference number: 6 (lower is better)
Translates to: LTSANDSSGQGYCWD*TLHISKGGRKFIYL
Trigger: CAAATAAATAAATTTTCTACCTCCTTTTGATATATGAAGTGTCAAGTCCCAGCAGTAGCCCTGCCCAGATGAGTCATTGGCTGATGTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS CAA 90 bp AAGCCTCAGTCTGCTCCTCTCCCTGCCATGCTTGAGGAGTTAACATaGCTAGTTCAAATAATCAAGTGTTCTGATACAAAAATGCAGTTA +
Preference number: 6 (lower is better)
Translates to: KPQSAPLPAMLEELT*LVQIIKCSDTKMQL
Trigger: TAACTGCATTTTTGTATCAGAACACTTGATTATTTGAACTAGCAATGTTAACTCCTCAAGCATGGCAGGGAGAGGAGCAGACTGAGGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679867.1
CDS CAA 90 bp AGTGAATATCAGAGCAGTATCCATAGAGAGACAGTCAATATCAACTaGACCTCCTTGGATTCGATACCAGTTGGCTTGCAAATCTATAGA +
Preference number: 6 (lower is better)
Translates to: SEYQSSIHRETVNIN*TSLDSIPVGLQIYR
Trigger: TCTATAGATTTGCAAGCCAACTGGTATCGAATCCAAGGAGGTCAAGTTGATATTGACTGTCTCTCTATGGATACTGCTCTGATATTCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 90 bp ACCGTTATTATAAGGTTGCCAGAGTCTGAATCTTGTAGCATTGGTTaGGGCAGTGTATGGCAAGGGAACATTGATGAAAAGTATATTCGT +
Preference number: 6 (lower is better)
Translates to: TVIIRLPESESCSIG*GSVWQGNIDEKYIR
Trigger: ACGAATATACTTTTCATCAATGTTCCCTTGCCATACACTGCCCAAACCAATGCTACAAGATTCAGACTCTGGCAACCTTATAATAACGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000681034.1
ENST00000681199.1
CDS CAA 90 bp ACCAGGGTATACTCTCTGTTGTTTCATAACCAAGACAACTCCTTTTaGCTTCAGAGAAGATCAGAAAGTCAAATCGATTGCTCACATGTG +
Preference number: 6 (lower is better)
Translates to: TRVYSLLFHNQDNSF*LQRRSESQIDCSHV
Trigger: CACATGTGAGCAATCGATTTGACTTTCTGATCTTCTCTGAAGCAAAAAGGAGTTGTCTTGGTTATGAAACAACAGAGAGTATACCCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473457.2
CDS CAA 90 bp CCCTCACATATCTCATTAAACTTGACATGCCAAATGTTATCACATTaGGGCTCACTATACGTAGAAGCATGTGGTGAACATGTAGAAGCA +
Preference number: 6 (lower is better)
Translates to: PSHISLNLTCQMLSH*GSLYVEACGEHVEA
Trigger: TGCTTCTACATGTTCACCACATGCTTCTACGTATAGTGAGCCCAAATGTGATAACATTTGGCATGTCAAGTTTAATGAGATATGTGAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681315.1
CDS CAA 90 bp AGGTACATTACATTTCATTCGGGGCTTTGCTATTTCACTGATGATTaGAGCTATAGCTTGCAGTTGCAAAAGAGTGTAAGCCAAAGTGCT +
Preference number: 6 (lower is better)
Translates to: RYITFHSGLCYFTDD*SYSLQLQKSVSQSA
Trigger: AGCACTTTGGCTTACACTCTTTTGCAACTGCAAGCTATAGCTCAAATCATCAGTGAAATAGCAAAGCCCCGAATGAAATGTAATGTACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS CAA 90 bp GTAATGCTTTGTCAGGCACAGGAAGCCCCATTAATGCAAATTGTATaGGCAAGCCACTTGAAAGATAAGAAGTGGTTATTGACTCTCATT +
Preference number: 6 (lower is better)
Translates to: VMLCQAQEAPLMQIV*ASHLKDKKWLLTLI
Trigger: AATGAGAGTCAATAACCACTTCTTATCTTTCAAGTGGCTTGCCAATACAATTTGCATTAATGGGGCTTCCTGTGCCTGACAAAGCATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS TCA 72 bp TACGGAGATTATTCTGGGCTCATGATAGCTGAGATATaGATAATGCTCCAGGAGTTTCCAAGTTATCCCATT +
Preference number: 6 (lower is better)
Translates to: YGDYSGLMIAEI*IMLQEFPSYPI
Trigger: AATGGGATAACTTGGAAACTCCTGGAGCATTATTCATATCTCAGCTATCATGAGCCCAGAATAATCTCCGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 72 bp ATCAGGATTTTTGGTGCTTATTTTACAGGTTGGACCTaGGTAGCCAGGGTCACATATACATTTGGTTCCATT +
Preference number: 6 (lower is better)
Translates to: IRIFGAYFTGWT*VARVTYTFGSI
Trigger: AATGGAACCAAATGTATATGTGACCCTGGCTACTCAGGTCCAACCTGTAAAATAAGCACCAAAAATCCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000679952.1
ENST00000681034.1
ENST00000681199.1
CDS TCA 72 bp AGCGGTGGTGGGTTAAGAATATTCATCAGACTTGTGTaGAGGGATATTGTTCTTAGGGTTTTGATCAAAGCA +
Preference number: 6 (lower is better)
Translates to: SGGGLRIFIRLV*RDIVLRVLIKA
Trigger: TGCTTTGATCAAAACCCTAAGAACAATATCCCTTCACACAAGTCTGATGAATATTCTTAACCCACCACCGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473457.2
CDS TCA 72 bp TCCTTGGATTCAGCTCATAAAGAGTTGGACTGGAATTaGCATGTCTCAATTCCTAACTCCCATGCTAGTATA +
Preference number: 6 (lower is better)
Translates to: SLDSAHKELDWN*HVSIPNSHASI
Trigger: TATACTAGCATGGGAGTTAGGAATTGAGACATGTCAATTCCAGTCCAACTCTTTATGAGCTGAATCCAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS TCA 72 bp AGTGGAATTTGTAGATCTAAGAGGACATTTTTCCCCTaGGGTTTGGACCTTAGAAGTAGTTACCAACAGACT +
Preference number: 6 (lower is better)
Translates to: SGICRSKRTFFP*GLDLRSSYQQT
Trigger: AGTCTGTTGGTAACTACTTCTAAGGTCCAAACCTCAGGGGAAAAATGTCCTCTTAGATCTACAAATTCCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS TCA 72 bp CTCCTGTGGGGGCTTCTCATCAAAAACGGATCTTACTaGATTAAGGGTCATGCTATATCAAAGGAATTTCAA +
Preference number: 6 (lower is better)
Translates to: LLWGLLIKNGSY*IKGHAISKEFQ
Trigger: TTGAAATTCCTTTGATATAGCATGACCCTTAATTCAGTAAGATCCGTTTTTGATGAGAAGCCCCCACAGGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS GCA 72 bp CATGACAACAGTGTACCTAATGGTGTACCTTCTGGATaGTTGGAACCAGGCTTTGTTTTAGTTTTCTACTTA +
Preference number: 6 (lower is better)
Translates to: HDNSVPNGVPSG*LEPGFVLVFYL
Trigger: TAAGTAGAAAACTAAAACAAAGCCTGGTTCCAAGCATCCAGAAGGTACACCATTAGGTACACTGTTGTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681921.1
CDS CCA 72 bp AGAGAAGATCAGAAAGTCAAATCGATTGCTCACATGTaGTTGTTAATAAAACTCCTATGGTGCTGCTCAAGG +
Preference number: 6 (lower is better)
Translates to: REDQKVKSIAHM*LLIKLLWCCSR
Trigger: CCTTGAGCAGCACCATAGGAGTTTTATTAACAACCACATGTGAGCAATCGATTTGACTTTCTGATCTTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473457.2
CDS CCA 72 bp TGTTTACTTGTTCCTTGGATTCAGCTCATAAAGAGTTaGACTGGAATTGACATGTCTCAATTCCTAACTCCC +
Preference number: 6 (lower is better)
Translates to: CLLVPWIQLIKS*TGIDMSQFLTP
Trigger: GGGAGTTAGGAATTGAGACATGTCAATTCCAGTCCAACTCTTTATGAGCTGAATCCAAGGAACAAGTAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679689.1
CDS CAA 72 bp TGCATAATCGCGCCACACTGTTCTCCAGTCTCACAGTaGTTACATTCAACCCATATATTTGGATTTAATTGC +
Preference number: 6 (lower is better)
Translates to: CIIAPHCSPVSQ*LHSTHIFGFNC
Trigger: GCAATTAAATCCAAATATATGGGTTGAATGTAACAACTGTGAGACTGGAGAACAGTGTGGCGCGATTATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680712.1
ENST00000681034.1
ENST00000681931.1
CDS CAA 72 bp CTGCAAATCGATCTCCATCTGATTTTCCAAATATCATaGCTGATGGTGTGGCAGCACAGAAGGTTTCATTTT +
Preference number: 6 (lower is better)
Translates to: LQIDLHLIFQIS*LMVWQHRRFHF
Trigger: AAAATGAAACCTTCTGTGCTGCCACACCATCAGCAATGATATTTGGAAAATCAGATGGAGATCGATTTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 72 bp ATCCATAGAGAGACAGTCAATATCAACTTGACCTCCTaGGATTCGATACCAGTTGGCTTGCAAATCTATAGA +
Preference number: 6 (lower is better)
Translates to: IHRETVNINLTS*DSIPVGLQIYR
Trigger: TCTATAGATTTGCAAGCCAACTGGTATCGAATCCAAGGAGGTCAAGTTGATATTGACTGTCTCTCTATGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 72 bp TCTAGTCTCATTATCACCACCAGGGTATACTCTCTGTaGTTTCATAACCAAGACAACTCCTTTTTGCTTCAG +
Preference number: 6 (lower is better)
Translates to: SSLIITTRVYSL*FHNQDNSFLLQ
Trigger: CTGAAGCAAAAAGGAGTTGTCTTGGTTATGAAACAACAGAGAGTATACCCTGGTGGTGATAATGAGACTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473457.2
CDS CAA 72 bp GGCTTGGTAGTTTTTCACTGCAAGACACATCAATCTTaGTGCGCTCCATCTGTCAATGGAAAAATATCTAGA +
Preference number: 6 (lower is better)
Translates to: GLVVFHCKTHQS*CAPSVNGKISR
Trigger: TCTAGATATTTTTCCATTGACAGATGGAGCGCACAAAGATTGATGTGTCTTGCAGTGAAAAACTACCAAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000680712.1
CDS CAA 72 bp ACATTTCATTCGGGGCTTTGCTATTTCACTGATGATTaGAGCTATAGCTTGCAGTTGCAAAAGAGTGTAAGC +
Preference number: 6 (lower is better)
Translates to: TFHSGLCYFTDD*SYSLQLQKSVS
Trigger: GCTTACACTCTTTTGCAACTGCAAGCTATAGCTCAAATCATCAGTGAAATAGCAAAGCCCCGAATGAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS CAA 72 bp ATTACTATCCTGCCTTCTTTTGAGGACTGTCAGGTTTaGAAGTTTCCACAGGAGTTTGGTAATGCTTTGTCA +
Preference number: 6 (lower is better)
Translates to: ITILPSFEDCQV*KFPQEFGNALS
Trigger: TGACAAAGCATTACCAAACTCCTGTGGAAACTTCAAAACCTGACAGTCCTCAAAAGAAGGCAGGATAGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS CAA 72 bp TCTGCTCCTCTCCCTGCCATGCTTGAGGAGTTAACATaGCTAGTTCAAATAATCAAGTGTTCTGATACAAAA +
Preference number: 6 (lower is better)
Translates to: SAPLPAMLEELT*LVQIIKCSDTK
Trigger: TTTTGTATCAGAACACTTGATTATTTGAACTAGCAATGTTAACTCCTCAAGCATGGCAGGGAGAGGAGCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679867.1
CDS CAA 90 bp ACAGTCAATATCAACTTGACCTCCTTGGATTCGATACCAGTTGGCTaGCAAATCTATAGAGCCATCAAATTTGTCTTGAAATCCAGTTTG +
Preference number: 6 (lower is better)
Translates to: TVNINLTSLDSIPVG*QIYRAIKFVLKSSL
Trigger: CAAACTGGATTTCAAGACAAATTTGATGGCTCTATAGATTTGCAAGCCAACTGGTATCGAATCCAAGGAGGTCAAGTTGATATTGACTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 90 bp TCTTCTCTGGGCCCAAAATCAAATGTATCCAAGAGCATCACAGGGTaGTTTACATTATTTCCATCGATAATGAAGTCATCAACAATCCAG +
Preference number: 6 (lower is better)
Translates to: SSLGPKSNVSKSITG*FTLFPSIMKSSTIQ
Trigger: CTGGATTGTTGATGACTTCATTATCGATGGAAATAATGTAAACAACCCTGTGATGCTCTTGGATACATTTGATTTTGGGCCCAGAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000681034.1
ENST00000681199.1
CDS CAA 90 bp CAGGCACAGGAAGCCCCATTAATGCAAATTGTATTGGCAAGCCACTaGAAAGATAAGAAGTGGTTATTGACTCTCATTTTATTATCTACC +
Preference number: 6 (lower is better)
Translates to: QAQEAPLMQIVLASH*KDKKWLLTLILLST
Trigger: GGTAGATAATAAAATGAGAGTCAATAACCACTTCTTATCTTTCAAGTGGCTTGCCAATACAATTTGCATTAATGGGGCTTCCTGTGCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS CAA 90 bp ATGCTCATTTCCGTAAATCATTTGTGCCAAAAATGTGACAGTATCTaGATAATGAAGAGCATGAGGGGATGGTCACGATGGAACTCATTT +
Preference number: 6 (lower is better)
Translates to: MLISVNHLCQKCDSI*IMKSMRGWSRWNSF
Trigger: AAATGAGTTCCATCGTGACCATCCCCTCATGCTCTTCATTATCAAGATACTGTCACATTTTTGGCACAAATGATTTACGGAAATGAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679867.1
CDS TCA 72 bp CTCTCGAAGCAAATGCCAGAGTATCCCATTGTCATTTaGATACTGAACAATAAGCCCTTCATTTCTAGTTCT +
Preference number: 6 (lower is better)
Translates to: LSKQMPEYPIVI*ILNNKPFISSS
Trigger: AGAACTAGAAATGAAGGGCTTATTGTTCAGTATTCAAATGACAATGGGATACTCTGGCATTTGCTTCGAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS TCA 72 bp GTTTCCCCTCTCTTAATGGCTTTCATATCCTGTGCCTaGATAACACAGTTTCATTGTCTCAACTCTAAATCA +
Preference number: 6 (lower is better)
Translates to: VSPLLMAFISCA*ITQFHCLNSKS
Trigger: TGATTTAGAGTTGAGACAATGAAACTGTGTTATTCAGGCACAGGATATGAAAGCCATTAAGAGAGGGGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681199.1
CDS TCA 72 bp TTTCTCCATACTGACCTCAGAGTGATCTCTTTAAAATaGAAGGTTTGTGGAATCACTCCTCAGCCTAAAACA +
Preference number: 6 (lower is better)
Translates to: FLHTDLRVISLK*KVCGITPQPKT
Trigger: TGTTTTAGGCTGAGGAGTGATTCCACAAACCTTTCATTTTAAAGAGATCACTCTGAGGTCAGTATGGAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS TCA 72 bp CAAAAGCCCATATTGCCAAGTCTGAGGATTACAAATTaGGGTCTGAAGTTAGCTCATCATGGAAGTTATGAT +
Preference number: 6 (lower is better)
Translates to: QKPILPSLRITN*GLKLAHHGSYD
Trigger: ATCATAACTTCCATGATGAGCTAACTTCAGACCTCAATTTGTAATCCTCAGACTTGGCAATATGGGCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681921.1
CDS TCA 72 bp AGGGTCATGCTATATCAAAGGAATTTCAAACCTTCCTaGAATGGACATGGGATGCCATGTAATAGATACTCA +
Preference number: 6 (lower is better)
Translates to: RVMLYQRNFKPS*NGHGMPCNRYS
Trigger: TGAGTATCTATTACATGGCATCCCATGTCCATTTCAGGAAGGTTTGAAATTCCTTTGATATAGCATGACCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS CCA 72 bp AGAATATTCCAAGAGAACACCTTGGTTACGGTTGTTTaGTGTAATCAGGCACCCATACATGAAGTAAAATTG +
Preference number: 6 (lower is better)
Translates to: RIFQENTLVTVV*CNQAPIHEVKL
Trigger: CAATTTTACTTCATGTATGGGTGCCTGATTACACCAAACAACCGTAACCAAGGTGTTCTCTTGGAATATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000478148.2
ENST00000679867.1
ENST00000680248.1
ENST00000681034.1
ENST00000681364.1
CDS CAA 72 bp ATCAACTTGACCTCCTTGGATTCGATACCAGTTGGCTaGCAAATCTATAGAGCCATCAAATTTGTCTTGAAA +
Preference number: 6 (lower is better)
Translates to: INLTSLDSIPVG*QIYRAIKFVLK
Trigger: TTTCAAGACAAATTTGATGGCTCTATAGATTTGCAAGCCAACTGGTATCGAATCCAAGGAGGTCAAGTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CAA 72 bp AATCCAGATTTCTTCTTTCTTACCGTTATTATAAGGTaGCCAGAGTCTGAATCTTGTAGCATTGGTTTGGGC +
Preference number: 6 (lower is better)
Translates to: NPDFFFLTVIIR*PESESCSIGLG
Trigger: GCCCAAACCAATGCTACAAGATTCAGACTCTGGCAACCTTATAATAACGGTAAGAAAGAAGAAATCTGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000681034.1
ENST00000681199.1
CDS TCA 72 bp ATTCCTCCACTGATGGAGAATTGTAACAGAATAGAGTaGGATCTCTCTGGGGTACTTTTTGCTATAAATCTA +
Preference number: 6 (lower is better)
Translates to: IPPLMENCNRIE*DLSGVLFAINL
Trigger: TAGATTTATAGCAAAAAGTACCCCAGAGAGATCTCACTCTATTCTGTTACAATTCTCCATCAGTGGAGGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000681034.1
CDS TCA 72 bp GAGGTTTGGACCTTAGAAGTAGTTACCAACAGACTGTaGAATCTAACCTGGGATCTTTTTAAAATACAGCAA +
Preference number: 6 (lower is better)
Translates to: EVWTLEVVTNRL*NLTWDLFKIQQ
Trigger: TTGCTGTATTTTAAAAAGATCCCAGGTTAGATTTCACAGTCTGTTGGTAACTACTTCTAAGGTCCAAACCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000681182.1
CDS TCA 72 bp ACCCAGGTTATTTTATTCTGCTGGAATAACGTAGTCTaGGGAAATCAGTATCTAAGTAAAACATCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: TQVILFCWNNVV*GNQYLSKTSAS
Trigger: TGAGGCTGATGTTTTACTTAGATACTGATTTCCTCAGACTACGTTATTCCAGCAGAATAAAATAACCTGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679867.1
ENST00000681921.1
CDS TCA 72 bp TATGCTCATTTCCGTAAATCATTTGTGCCAAAAATGTaGCAGTATCTTGATAATGAAGAGCATGAGGGGATG +
Preference number: 6 (lower is better)
Translates to: YAHFRKSFVPKM*QYLDNEEHEGM
Trigger: CATCCCCTCATGCTCTTCATTATCAAGATACTGTCACATTTTTGGCACAAATGATTTACGGAAATGAGCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679867.1
CDS GCA 72 bp ACTCTCTGTTGTTTCATAACCAAGACAACTCCTTTTTaGTTCAGAGAAGATCAGAAAGTCAAATCGATTGCT +
Preference number: 6 (lower is better)
Translates to: TLCCFITKTTPF*FREDQKVKSIA
Trigger: AGCAATCGATTTGACTTTCTGATCTTCTCTGAAGCAAAAAGGAGTTGTCTTGGTTATGAAACAACAGAGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473457.2
CDS CCA 72 bp TATGACAATAAATTCCTTCAAATGATCAGAAGTCAGTaGGACAAATGGATGGGTTGGCTTGGTAGTTTTTCA +
Preference number: 6 (lower is better)
Translates to: YDNKFLQMIRSQ*DKWMGWLGSFS
Trigger: TGAAAAACTACCAAGCCAACCCATCCATTTGTCCCACTGACTTCTGATCATTTGAAGGAATTTATTGTCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680712.1
CDS CAA 72 bp TGGCAAGGGAACATTGATGAAAAGTATATTCGTTGTTaGAGGAAAGTAAAATTCATCCATCAGGTGCCAAGT +
Preference number: 6 (lower is better)
Translates to: WQGNIDEKYIRC*RKVKFIHQVPS
Trigger: ACTTGGCACCTGATGGATGAATTTTACTTTCCTCAAACAACGAATATACTTTTCATCAATGTTCCCTTGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000679867.1
ENST00000681034.1
ENST00000681199.1
CDS CAA 72 bp ATCTCATTAAACTTGACATGCCAAATGTTATCACATTaGGGCTCACTATACGTAGAAGCATGTGGTGAACAT +
Preference number: 6 (lower is better)
Translates to: ISLNLTCQMLSH*GSLYVEACGEH
Trigger: ATGTTCACCACATGCTTCTACGTATAGTGAGCCCAAATGTGATAACATTTGGCATGTCAAGTTTAATGAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681315.1
CDS CAA 72 bp TTCTGTATATCTCGAAATACACACCAAAGCTTGGATTaGCACACAATAATACCTCCCTTTCTCTCTCAGATA +
Preference number: 6 (lower is better)
Translates to: FCISRNTHQSLD*HTIIPPFLSQI
Trigger: TATCTGAGAGAGAAAGGGAGGTATTATTGTGTGCAAATCCAAGCTTTGGTGTGTATTTCGAGATATACAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681199.1
CDS CAA 72 bp CAAAGCATACAACACCATGCAAATGTAGCAATGCTCTaGTCTCATTCAAAATGTTTTAGTGCTCTGAGAGTT +
Preference number: 6 (lower is better)
Translates to: QSIQHHANVAML*SHSKCFSALRV
Trigger: AACTCTCAGAGCACTAAAACATTTTGAATGAGACAAGAGCATTGCTACATTTGCATGGTGTTGTATGCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679867.1
CDS TCA 72 bp GAAGAACTGCACAAATCTGACATTTGTAAACGTTACTaGAGACTTTCACTTCCAAAAGAAATCCACATGCTT +
Preference number: 6 (lower is better)
Translates to: EELHKSDICKRY*RLSLPKEIHML
Trigger: AAGCATGTGGATTTCTTTTGGAAGTGAAAGTCTTCAGTAACGTTTACAAATGTCAGATTTGTGCAGTTCTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681315.1
CDS TCA 72 bp TCCATATTTAAAACTATGACAATAAATTCCTTCAAATaGTCAGAAGTCAGTGGGACAAATGGATGGGTTGGC +
Preference number: 6 (lower is better)
Translates to: SIFKTMTINSFK*SEVSGTNGWVG
Trigger: GCCAACCCATCCATTTGTCCCACTGACTTCTGATCATTTGAAGGAATTTATTGTCATAGTTTTAAATATGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680712.1
CDS TCA 72 bp ATTGTACCACTAATGGTGTTACTATTCTGCCAACATTaGAAGATAGCCCAGCTTCAAGTAAGACTTAAATCT +
Preference number: 6 (lower is better)
Translates to: IVPLMVLLFCQH*KIAQLQVRLKS
Trigger: AGATTTAAGTCTTACTTGAAGCTGGGCTATCTTTCAATGTTGGCAGAATAGTAACACCATTAGTGGTACAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680712.1
CDS TCA 72 bp TTCAGAGAAATTAGGTTTCTGACACTTGATTGTCAATaGTCGTGTTATGCCACATCATTCAGACTTTATGGA +
Preference number: 6 (lower is better)
Translates to: FREIRFLTLDCQ*SCYATSFRLYG
Trigger: TCCATAAAGTCTGAATGATGTGGCATAACACGATCATTGACAATCAAGTGTCAGAAACCTAATTTCTCTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679867.1
CDS GCA 72 bp TTTTTGCTTCAGAGAAGATCAGAAAGTCAAATCGATTaGTCACATGTGGTTGTTAATAAAACTCCTATGGTG +
Preference number: 6 (lower is better)
Translates to: FLLQRRSESQID*SHVVVNKTPMV
Trigger: CACCATAGGAGTTTTATTAACAACCACATGTGAGCAATCGATTTGACTTTCTGATCTTCTCTGAAGCAAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473457.2
CDS GCA 72 bp AAATTCCTAAGTGAAATGTATGCCCCAACCATTAGTTaGAAAAACATATCAGTAGCCCTGTTTGTAACATAC +
Preference number: 6 (lower is better)
Translates to: KFLSEMYAPTIS*KNISVALFVTY
Trigger: GTATGTTACAAACAGGGCTACTGATATGTTTTTGCAACTAATGGTTGGGGCATACATTTCACTTAGGAATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679867.1
CDS CCA 72 bp AAAAATCTAACCACACTCATGGCTTTGAGGAGAACCTaGATTCAGTTCTTAAAGAAGTCAAGTAATAGACAT +
Preference number: 6 (lower is better)
Translates to: KNLTTLMALRRT*IQFLKKSSNRH
Trigger: ATGTCTATTACTTGACTTCTTTAAGAACTGAATCCAGGTTCTCCTCAAAGCCATGAGTGTGGTTAGATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000681401.1
CDS CAA 72 bp ACCTCCACAAGATTGGTAAAGTCAAGACTAATGCTGTaGAAAAGCACAGATGTCATGATAATCTCATCAATA +
Preference number: 6 (lower is better)
Translates to: TSTRLVKSRLML*KSTDVMIISSI
Trigger: TATTGATGAGATTATCATGACATCTGTGCTTTTCAACAGCATTAGTCTTGACTTTACCAATCTTGTGGAGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000343529.9
ENST00000424685.3
ENST00000428762.6
ENST00000473457.2
ENST00000679867.1
ENST00000680706.1
ENST00000681034.1
CDS CCA 72 bp CTCCTCATGATTAAAATATACTTCCAGGAAGTGAAGTaGAATGTTACTCCATTTATATGTGACTGTGAATGT +
Preference number: 6 (lower is better)
Translates to: LLMIKIYFQEVK*NVTPFICDCEC
Trigger: ACATTCACAGTCACATATAAATGGAGTAACATTCCACTTCACTTCCTGGAAGTATATTTTAATCATGAGGAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680712.1
CDS CCA 72 bp TTTAGGCATCAATGCATAAGAGAACTTATGTTTACATaGAAGCTTTATAGTCCAAATGCTTCAGAAGCAACT +
Preference number: 6 (lower is better)
Translates to: FRHQCIRELMFT*KLYSPNASEAT
Trigger: AGTTGCTTCTGAAGCATTTGGACTATAAAGCTTCCATGTAAACATAAGTTCTCTTATGCATTGATGCCTAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681199.1
CDS CCA 72 bp AGTGCTAAGTTTGTTCTCATTAAACTTGTGTTTTCTTaGCTAATATGGGCAGTACTGAGGTTAAACTCAATA +
Preference number: 6 (lower is better)
Translates to: SAKFVLIKLVFS*LIWAVLRLNSI
Trigger: TATTGAGTTTAACCTCAGTACTGCCCATATTAGCCAAGAAAACACAAGTTTAATGAGAACAAACTTAGCACT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679867.1