RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RELL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000164620

Ensembl transcript IDs: ENST00000297164.8, ENST00000444782.5, ENST00000517794.1, ENST00000518025.5, ENST00000518856.1, ENST00000520674.5, ENST00000521367.5

Found 338 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GAAGGCCAGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGCTGAGGCCCCCAGCCTaGGACTGTGCAACTCCAGGT +
Preference number: 2 (lower is better)
Translates to: EGQARAWASCAKRAGGLRLRPPA*DCATPG
Trigger: ACCTGGAGTTGCACAGTCTCAGGCTGGGGGCCTCAG...CCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCTGGCCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
3UTR-3UTR CCA 90 bp TGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCGCCCACCCACCCCCTaGCCCTGCCAGCTGGTAGTC +
Preference number: 2 (lower is better)
Translates to: CSQLPRSIIWSEVLGKAGRPPTP*PCQLVV
Trigger: GACTACCAGCTGGCAGGGCCAGGGGGTGGGTGGGCG...CCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
3UTR-3UTR CCA 90 bp GGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCCGCCCACCCACCCCCTaGCCCTGCCAGCTGGTAGTC +
Preference number: 2 (lower is better)
Translates to: GLLPAATLYHMERGVGEGRPPTP*PCQLVV
Trigger: GACTACCAGCTGGCAGGGCCAGGGGGTGGGTGGGCG...GCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
3UTR-3UTR CCA 90 bp CCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGCGCCCACCCACCCCCTaGCCCTGCCAGCTGGTAGTC +
Preference number: 2 (lower is better)
Translates to: PAPSCHALSYGARCWGRRRPPTP*PCQLVV
Trigger: GACTACCAGCTGGCAGGGCCAGGGGGTGGGTGGGCG...CCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
3UTR-3UTR TCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCGAGACTGAGGGGCTGTaGCCTCTCCTGAGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: APSCHALSYGARCWGRRGETEGL*PLLRPP
Trigger: TGGGGGCCTCAGGAGAGGTCACAGCCCCTCAGTCTC...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
3UTR-3UTR GCA 90 bp GGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGCCCACCCCCTGGCCCTaGCAGCTGGTAGTCCATCAG +
Preference number: 2 (lower is better)
Translates to: GRGLLPAATLYHMERGVGPTPWP*QLVVHQ
Trigger: CTGATGGACTACCAGCTGGCAGGGCCAGGGGGTGGG...CCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
3UTR-3UTR CCA 90 bp CCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCGCCCACCCACCCCCTaGCCCTGCCAGCTGGTAGTC +
Preference number: 2 (lower is better)
Translates to: PLVLRGQGAYGAIALGAHRPPTP*PCQLVV
Trigger: GACTACCAGCTGGCAGGGCCAGGGGGTGGGTGGGCG...GTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
3UTR-3UTR TCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCCTGAGGCCCCCAGCCTaGGACTGTGCAACTCCAGGT +
Preference number: 2 (lower is better)
Translates to: APSCHALSYGARCWGRRGLRPPA*DCATPG
Trigger: ACCTGGAGTTGCACAGTCTCAGGCTGGGGGCCTCAG...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
3UTR-3UTR GCA 90 bp CTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCACCCACCCCCTGGCCCTaGCAGCTGGTAGTCCATCAG +
Preference number: 2 (lower is better)
Translates to: LPAATLYHMERGVGEGGAPTPWP*QLVVHQ
Trigger: CTGATGGACTACCAGCTGGCAGGGCCAGGGGGTGGG...TGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
3UTR-3UTR CCA 90 bp CACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTAGCTGGTCCCTCAGCTaGGGGGCAGTGCTGTCCAGT +
Preference number: 2 (lower is better)
Translates to: HGQGPAPSCHALSYGARCSWSLS*GAVLSS
Trigger: ACTGGACAGCACTGCCCCCCAGCTGAGGGACCAGCT...ACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
3UTR-3UTR TCA 90 bp TCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGCTGAGGCCCCCAGCCTaGGACTGTGCAACTCCAGGT +
Preference number: 2 (lower is better)
Translates to: SQLPRSIIWSEVLGKAGQLRPPA*DCATPG
Trigger: ACCTGGAGTTGCACAGTCTCAGGCTGGGGGCCTCAG...CTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
3UTR-3UTR GCA 90 bp GCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCCACCCCCTGGCCCTaGCAGCTGGTAGTCCATCAG +
Preference number: 2 (lower is better)
Translates to: ASCAKRAGGLRCYCFRGPPTPWP*QLVVHQ
Trigger: CTGATGGACTACCAGCTGGCAGGGCCAGGGGGTGGG...TGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
3UTR-3UTR CCA 90 bp TGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGAGCTGGTCCCTCAGCTaGGGGGCAGTGCTGTCCAGT +
Preference number: 2 (lower is better)
Translates to: CAKRAGGLRCYCFRGPPRSWSLS*GAVLSS
Trigger: ACTGGACAGCACTGCCCCCCAGCTGAGGGACCAGCT...CCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
3UTR-3UTR CCA 90 bp TCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGAGCTGGTCCCTCAGCTaGGGGGCAGTGCTGTCCAGT +
Preference number: 2 (lower is better)
Translates to: SQLPRSIIWSEVLGKAGQSWSLS*GAVLSS
Trigger: ACTGGACAGCACTGCCCCCCAGCTGAGGGACCAGCT...CTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
3UTR-3UTR TCA 90 bp CCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCTGAGGCCCCCAGCCTaGGACTGTGCAACTCCAGGT +
Preference number: 2 (lower is better)
Translates to: PLVLRGQGAYGAIALGAHLRPPA*DCATPG
Trigger: ACCTGGAGTTGCACAGTCTCAGGCTGGGGGCCTCAG...GTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
3UTR-3UTR CCA 90 bp TGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCGGCAGTGCTGTCCAGTaGAGGGGAGGGCTTTCACGC +
Preference number: 2 (lower is better)
Translates to: WASCAKRAGGLRCYCFRGGSAVQ*RGGLSR
Trigger: GCGTGAAAGCCCTCCCCTCCACTGGACAGCACTGCC...GCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
3UTR-3UTR CCA 90 bp CTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCAGCCACGCTCTATCATATaGAGCGAGGTGTTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: LRGQGAYGAIALGAHHGQPRSII*SEVLGK
Trigger: CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGG...CTGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
3UTR-3UTR CCA 90 bp TGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACGCTCTATCATATaGAGCGAGGTGTTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: WASCAKRAGGLRCYCFRGPRSII*SEVLGK
Trigger: CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGG...GCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp CTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCAGGCGGGGCGGAGAGCGTaGGCTCTGCGCGCGCGTGAC +
Preference number: 4 (lower is better)
Translates to: LRGQGAYGAIALGAHHGQAGRRA*ALRARD
Trigger: GTCACGCGCGCGCAGAGCTCACGCTCTCCGCCCCGC...CTGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR TCA 90 bp GGCCCACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCAGGATGCGGGCTGGCTaGGAGCGGTGGCAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GPPRAGACSQLPRSIIWSRMRAG*ERWQAP
Trigger: CGGAGCCTGCCACCGCTCTCAGCCAGCCCGCATCCT...GCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGTGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GAAGGCCAGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGGGGCAACTCCGGCCCTaGGTCAGGGAGATCGCCTCC +
Preference number: 4 (lower is better)
Translates to: EGQARAWASCAKRAGGLRGQLRP*VREIAS
Trigger: GGAGGCGATCTCCCTGACCCAGGGCCGGAGTTGCCC...CCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCTGGCCTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
CDS-3UTR CCA 90 bp GAAGGCCAGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGGGTTCCGGCTTCTGCTaGGGTTCCGGCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: EGQARAWASCAKRAGGLRGSGFC*GSGSRG
Trigger: GCCCCTGGAGCCGGAACCCCAGCAGAAGCCGGAACC...CCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCTGGCCTTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
CDS-3UTR TCA 90 bp GAAGGCCAGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGGGCTTCCCGAGGATCTaGCCCCCGGCCGGAGACAAA +
Preference number: 4 (lower is better)
Translates to: EGQARAWASCAKRAGGLRGFPRI*PPAGDK
Trigger: TTTGTCTCCGGCCGGGGGTCAGATCCTCGGGAAGCC...CCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCTGGCCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297164.8
ENST00000444782.5
CDS-3UTR GCA 90 bp GAAGGCCAGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGGCTCCTGCCCTCAGATaGCCCGACCGAGCGGAGAGT +
Preference number: 4 (lower is better)
Translates to: EGQARAWASCAKRAGGLRAPALR*PDRAES
Trigger: ACTCTCCGCTCGGTCGGGGCATCTGAGGGCAGGAGC...CCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCTGGCCTTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297164.8
ENST00000444782.5
CDS-3UTR GCA 90 bp ACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGGCGGAGCGCAGGTGTaGGGGGCGGAGAGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: TTGRGLLPAATLYHMERGGGAQV*GAESVS
Trigger: GCTCACGCTCTCCGCCCCGCACACCTGCGCTCCGCC...ACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR GCA 90 bp AGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGGCGGAGCGCAGGTGTaGGGGGCGGAGAGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: RPGPGPLVLRGQGAYGAIGGAQV*GAESVS
Trigger: GCTCACGCTCTCCGCCCCGCACACCTGCGCTCCGCC...AATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp GGCCCACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGGGCTGGCTAGGACCTaGGGCTGTGGCCTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GPPRAGACSQLPRSIIWSGLART*GCGLSG
Trigger: CCCTGAGAGGCCACAGCCCCAGGTCCTAGCCAGCCC...GCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGTGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp AGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGCGGGGCGGAGAGCGTaGGCTCTGCGCGCGCGTGAC +
Preference number: 4 (lower is better)
Translates to: RGLLPAATLYHMERGVGEAGRRA*ALRARD
Trigger: GTCACGCGCGCGCAGAGCTCACGCTCTCCGCCCCGC...TTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR TCA 90 bp CCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACGCGGGGCGGAGAGCGTaGGCTCTGCGCGCGCGTGAC +
Preference number: 4 (lower is better)
Translates to: PLVLRGQGAYGAIALGAHAGRRA*ALRARD
Trigger: GTCACGCGCGCGCAGAGCTCACGCTCTCCGCCCCGC...GTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR TCA 90 bp GGCCCACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGACTGAGGGGCTGTaGCCTCTCCTGAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: GPPRAGACSQLPRSIIWSETEGL*PLLRPP
Trigger: TGGGGGCCTCAGGAGAGGTCACAGCCCCTCAGTCTC...GCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGTGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCGCCTGGCGCAGCTCCTaGCCTCAGATGCCCCGACCG +
Preference number: 4 (lower is better)
Translates to: APSCHALSYGARCWGRRGAWRSS*PQMPRP
Trigger: CGGTCGGGGCATCTGAGGGCAGGAGCTGCGCCAGGC...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR GCA 90 bp AGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCCTGGCGCAGCTCCTaGCCTCAGATGCCCCGACCG +
Preference number: 4 (lower is better)
Translates to: RPGPGPLVLRGQGAYGAIAWRSS*PQMPRP
Trigger: CGGTCGGGGCATCTGAGGGCAGGAGCTGCGCCAGGC...AATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR GCA 90 bp TGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGGCGGAGCGCAGGTGTaGGGGGCGGAGAGCGTGAGC +
Preference number: 4 (lower is better)
Translates to: CAKRAGGLRCYCFRGPPRGGAQV*GAESVS
Trigger: GCTCACGCTCTCCGCCCCGCACACCTGCGCTCCGCC...CCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR GCA 90 bp GAAGGCCAGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTCTGGTTCCGGCTTCTaGTGGGGTTCCGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: EGQARAWASCAKRAGGLRSGSGF*WGSGSR
Trigger: CCTGGAGCCGGAACCCCAGCAGAAGCCGGAACCAGA...CCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCTGGCCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
CDS-3UTR GCA 90 bp GAAGGCCAGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGGCCTCTTGCTGCGGCTaGAATGGAGGCAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: EGQARAWASCAKRAGGLRASCCG*NGGKGL
Trigger: CAGCCCCTTGCCTCCATTGCAGCCGCAGCAAGAGGC...CCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCTGGCCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
CDS-3UTR CCA 90 bp GCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCAGTGCGGCGCCGAGTCTaGGTCCGGGTAGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: AKRAGGLRCYCFRGPPRAVRRRV*VRVGDR
Trigger: CCTGTCCCCTACCCGGACCCAGACTCGGCGCCGCAC...TGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp GGCCCACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGAAGGATGCGGGCTaGCTGAGAGCGGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GPPRAGACSQLPRSIIWSEKDAG*LRAVAG
Trigger: GCCTGCCACCGCTCTCAGCCAGCCCGCATCCTTCTC...GCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCTCCGACATGAGGCCCTaGGGGGCGAGCGCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GLLPAATLYHMERGVGEGSDMRP*GASAGQ
Trigger: CTGGCCCGCGCTCGCCCCCCAGGGCCTCATGTCGGA...GCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297164.8
ENST00000444782.5
CDS-3UTR CCA 90 bp GGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGCGCCCACCCACCCCCTaGCCCTGCCAGCTGGTAGTC +
Preference number: 4 (lower is better)
Translates to: GRGLLPAATLYHMERGVGRPPTP*PCQLVV
Trigger: GACTACCAGCTGGCAGGGCCAGGGGGTGGGTGGGCG...CCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCCGCCCACCCACCCCCTaGCCCTGCCAGCTGGTAGTC +
Preference number: 4 (lower is better)
Translates to: APSCHALSYGARCWGRRGRPPTP*PCQLVV
Trigger: GACTACCAGCTGGCAGGGCCAGGGGGTGGGTGGGCG...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGAGATACCGGGAGAGCTaGGCCGGGCGAGGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKRYRES*AGRGAE
Trigger: CTCCGCCCCTCGCCCGGCTCAGCTCTCCCGGTATCT...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444782.5
CDS-3UTR GCA 90 bp CTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGCCTGGCGCAGCTCCTaGCCTCAGATGCCCCGACCG +
Preference number: 4 (lower is better)
Translates to: LPAATLYHMERGVGEGGAAWRSS*PQMPRP
Trigger: CGGTCGGGGCATCTGAGGGCAGGAGCTGCGCCAGGC...TGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR GCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGGAGAGCGTGAGCTCTaGGCGCGCGTGACTGCGCCG +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKGEREL*ARVTAP
Trigger: CGGCGCAGTCACGCGCGCGCAGAGCTCACGCTCTCC...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR GCA 90 bp CACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTCATGGCAGGCATCCCTaGCTTGGGCTGCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: HGQGPAPSCHALSYGARCHGRHP*LGLPSP
Trigger: GGGGGAGGGCAGCCCAAGGCAGGGATGCCTGCCATG...ACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCCATGGCAGGCATCCCTaGCTTGGGCTGCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: APSCHALSYGARCWGRRGHGRHP*LGLPSP
Trigger: GGGGGAGGGCAGCCCAAGGCAGGGATGCCTGCCATG...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGGCCTGCGCCCGGTTTaGGGCAAGCGGCTGGATGGG +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKGLRPV*GKRLDG
Trigger: CCCATCCAGCCGCTTGCCCCAAACCGGGCGCAGGCC...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGTGCGGCGCCGAGTCTaGGTCCGGGTAGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKVRRRV*VRVGDR
Trigger: CCTGTCCCCTACCCGGACCCAGACTCGGCGCCGCAC...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp GGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGTGCGGCGCCGAGTCTaGGTCCGGGTAGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: GLLPAATLYHMERGVGEGVRRRV*VRVGDR
Trigger: CCTGTCCCCTACCCGGACCCAGACTCGGCGCCGCAC...GCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp CACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTGGGCAACTCCGGCCCTaGGTCAGGGAGATCGCCTCC +
Preference number: 4 (lower is better)
Translates to: HGQGPAPSCHALSYGARCGQLRP*VREIAS
Trigger: GGAGGCGATCTCCCTGACCCAGGGCCGGAGTTGCCC...ACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCAGGGTTCCGGCTTCTGCTaGGGTTCCGGCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LRGQGAYGAIALGAHHGQGSGFC*GSGSRG
Trigger: GCCCCTGGAGCCGGAACCCCAGCAGAAGCCGGAACC...CTGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCATCCGACATGAGGCCCTaGGGGGCGAGCGCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ASCAKRAGGLRCYCFRGPSDMRP*GASAGQ
Trigger: CTGGCCCGCGCTCGCCCCCCAGGGCCTCATGTCGGA...TGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297164.8
ENST00000444782.5
CDS-3UTR CCA 90 bp GGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGCAGGCATCCCTGCCTTaGGCTGCCCTCCCCCAGACC +
Preference number: 4 (lower is better)
Translates to: GRGLLPAATLYHMERGVGQASLP*AALPQT
Trigger: GGTCTGGGGGAGGGCAGCCCAAGGCAGGGATGCCTG...CCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp ACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTCAGGCATCCCTGCCTTaGGCTGCCCTCCCCCAGACC +
Preference number: 4 (lower is better)
Translates to: TTGRGLLPAATLYHMERGQASLP*AALPQT
Trigger: GGTCTGGGGGAGGGCAGCCCAAGGCAGGGATGCCTG...ACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGGGCTGGCTAGGACCTaGGGCTGTGGCCTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GRGLLPAATLYHMERGVGGLART*GCGLSG
Trigger: CCCTGAGAGGCCACAGCCCCAGGTCCTAGCCAGCCC...CCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp CACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTGGCTTCCCGAGGATCTaGCCCCCGGCCGGAGACAAA +
Preference number: 4 (lower is better)
Translates to: HGQGPAPSCHALSYGARCGFPRI*PPAGDK
Trigger: TTTGTCTCCGGCCGGGGGTCAGATCCTCGGGAAGCC...ACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR TCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCGGCTTCCCGAGGATCTaGCCCCCGGCCGGAGACAAA +
Preference number: 4 (lower is better)
Translates to: APSCHALSYGARCWGRRGGFPRI*PPAGDK
Trigger: TTTGTCTCCGGCCGGGGGTCAGATCCTCGGGAAGCC...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR TCA 90 bp GCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCAAGGATGCGGGCTGGCTaGGAGCGGTGGCAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: ASCAKRAGGLRCYCFRGPRMRAG*ERWQAP
Trigger: CGGAGCCTGCCACCGCTCTCAGCCAGCCCGCATCCT...TGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp AGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAAGGATGCGGGCTGGCTaGGAGCGGTGGCAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: RGLLPAATLYHMERGVGERMRAG*ERWQAP
Trigger: CGGAGCCTGCCACCGCTCTCAGCCAGCCCGCATCCT...TTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp CCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACAGGATGCGGGCTGGCTaGGAGCGGTGGCAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: PLVLRGQGAYGAIALGAHRMRAG*ERWQAP
Trigger: CGGAGCCTGCCACCGCTCTCAGCCAGCCCGCATCCT...GTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp CCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGGTGGTTTCTCCCACCCTaGCCACCTGGCCGACCCGGT +
Preference number: 4 (lower is better)
Translates to: PSCHALSYGARCWGRRGRWFLPP*PPGRPG
Trigger: ACCGGGTCGGCCAGGTGGTCAGGGTGGGAGAAACCA...CCTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297164.8
CDS-3UTR TCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGTCTAAGACGTCCGGCTaGGGTCCGGCCCCACCCCCT +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKSKTSG*GPAPPP
Trigger: AGGGGGTGGGGCCGGACCTCAGCCGGACGTCTTAGA...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000297164.8
CDS-3UTR TCA 90 bp CTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCAGTCGTCCTCAGGGGGCTaGAGCTGGGCATCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: LRGQGAYGAIALGAHHGQSSSGG*SWASSG
Trigger: GCCTGACGATGCCCAGCTTCAGCCCCCTGAGGACGA...CTGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000297164.8
ENST00000444782.5
CDS-3UTR TCA 90 bp ACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGAGACTGAGGGGCTGTaGCCTCTCCTGAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: TTGRGLLPAATLYHMERGETEGL*PLLRPP
Trigger: TGGGGGCCTCAGGAGAGGTCACAGCCCCTCAGTCTC...ACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp CTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCAGGAAGTGACCACGGCCTaGGCCCGGTTTGGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: LRGQGAYGAIALGAHHGQEVTTA*ARFGAS
Trigger: GCTTGCCCCAAACCGGGCGCAGGCCGTGGTCACTTC...CTGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR GCA 90 bp AGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTGGAGAGCGTGAGCTCTaGGCGCGCGTGACTGCGCCG +
Preference number: 4 (lower is better)
Translates to: RAWASCAKRAGGLRCYCFGEREL*ARVTAP
Trigger: CGGCGCAGTCACGCGCGCGCAGAGCTCACGCTCTCC...AAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR GCA 90 bp CTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCAGCCCTGGCTTCCCAAATaGCTTCACCCGTCGCGGGCC +
Preference number: 4 (lower is better)
Translates to: LRGQGAYGAIALGAHHGQPWLPK*LHPSRA
Trigger: GGCCCGCGACGGGTGAAGGCATTTGGGAAGCCAGGG...CTGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR GCA 90 bp GCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCACCCACCCCCTGGCCCTaGCAGCTGGTAGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: AKRAGGLRCYCFRGPPRAPTPWP*QLVVHQ
Trigger: CTGATGGACTACCAGCTGGCAGGGCCAGGGGGTGGG...TGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp GGCCCACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGGCCTACGGTGCTATTaGTTTAGGGGCCCACCACGG +
Preference number: 4 (lower is better)
Translates to: GPPRAGACSQLPRSIIWSGLRCY*FRGPPR
Trigger: CCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCC...GCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCAGGGCAAGCGGCTGGATaGGATGGCTCGGCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: AKRAGGLRCYCFRGPPRAGQAAG*DGSASR
Trigger: TCGGGAAGCCGAGCCATCCCATCCAGCCGCTTGCCC...TGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp TGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCGGCCTGCGCCCGGTTTaGGGCAAGCGGCTGGATGGG +
Preference number: 4 (lower is better)
Translates to: WASCAKRAGGLRCYCFRGGLRPV*GKRLDG
Trigger: CCCATCCAGCCGCTTGCCCCAAACCGGGCGCAGGCC...GCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp CCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACGGCCTGCGCCCGGTTTaGGGCAAGCGGCTGGATGGG +
Preference number: 4 (lower is better)
Translates to: PLVLRGQGAYGAIALGAHGLRPV*GKRLDG
Trigger: CCCATCCAGCCGCTTGCCCCAAACCGGGCGCAGGCC...GTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp GAAGGCCAGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGGTGGGTGTTGTCCACTaGTCTATCCGGTACGCCTGG +
Preference number: 4 (lower is better)
Translates to: EGQARAWASCAKRAGGLRVGVVH*SIRYAW
Trigger: CCAGGCGTACCGGATAGACCAGTGGACAACACCCAC...CCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCTGGCCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000297164.8
ENST00000444782.5
CDS-3UTR CCA 90 bp GGCCCACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCACAGGCGGTCCGGCGTaGGTGTTGTCCACTGGTCTA +
Preference number: 4 (lower is better)
Translates to: GPPRAGACSQLPRSIIWSTGGPA*VLSTGL
Trigger: TAGACCAGTGGACAACACCCACGCCGGACCGCCTGT...GCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp GGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGCAACTCCGGCCCTaGGTCAGGGAGATCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GLLPAATLYHMERGVGEGGQLRP*VREIAS
Trigger: GGAGGCGATCTCCCTGACCCAGGGCCGGAGTTGCCC...GCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp ACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGAGAAGGATGCGGGCTaGCTGAGAGCGGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: TTGRGLLPAATLYHMERGEKDAG*LRAVAG
Trigger: GCCTGCCACCGCTCTCAGCCAGCCCGCATCCTTCTC...ACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp TCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGGGTTCCGGCTTCTGCTaGGGTTCCGGCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SQLPRSIIWSEVLGKAGQGSGFC*GSGSRG
Trigger: GCCCCTGGAGCCGGAACCCCAGCAGAAGCCGGAACC...CTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGGTTCCGGCTTCTGCTaGGGTTCCGGCTCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKGSGFC*GSGSRG
Trigger: GCCCCTGGAGCCGGAACCCCAGCAGAAGCCGGAACC...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp ACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTTCTCTACCACGACCCTaGTCCCGCTTCCCCGACGCC +
Preference number: 4 (lower is better)
Translates to: TTGRGLLPAATLYHMERGSLPRP*SRFPDA
Trigger: GGCGTCGGGGAAGCGGGACCAGGGTCGTGGTAGAGA...ACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297164.8
CDS-3UTR CCA 90 bp TCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGCAGGCATCCCTGCCTTaGGCTGCCCTCCCCCAGACC +
Preference number: 4 (lower is better)
Translates to: SQLPRSIIWSEVLGKAGQQASLP*AALPQT
Trigger: GGTCTGGGGGAGGGCAGCCCAAGGCAGGGATGCCTG...CTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGCAGGCATCCCTGCCTTaGGCTGCCCTCCCCCAGACC +
Preference number: 4 (lower is better)
Translates to: PAPSCHALSYGARCWGRRQASLP*AALPQT
Trigger: GGTCTGGGGGAGGGCAGCCCAAGGCAGGGATGCCTG...CCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCAGGGGGCAGCCTCTCCATaGCAGGCATCCCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LRGQGAYGAIALGAHHGQGAASP*QASLPW
Trigger: CCAAGGCAGGGATGCCTGCCATGGAGAGGCTGCCCC...CTGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGGGCTGGCTAGGACCTaGGGCTGTGGCCTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKGLART*GCGLSG
Trigger: CCCTGAGAGGCCACAGCCCCAGGTCCTAGCCAGCCC...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp AGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTCGCCCACCCACCCCCTaGCCCTGCCAGCTGGTAGTC +
Preference number: 4 (lower is better)
Translates to: RAWASCAKRAGGLRCYCFRPPTP*PCQLVV
Trigger: GACTACCAGCTGGCAGGGCCAGGGGGTGGGTGGGCG...AAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGCTTCCTAGAGAAGTaGCCACGGCCTGCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: APSCHALSYGARCWGRRGSFLEK*PRPAPG
Trigger: ACCGGGCGCAGGCCGTGGTCACTTCTCTAGGAAGCT...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR TCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCGGCTTTCCGCACCTTTaGGGGACGGAGTGGCGGGAT +
Preference number: 4 (lower is better)
Translates to: APSCHALSYGARCWGRRGGFPHL*GTEWRD
Trigger: ATCCCGCCACTCCGTCCCTCAAAGGTGCGGAAAGCC...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR TCA 90 bp CTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCATCGTCCTCAGGGGGCTaGAGCTGGGCATCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: LPAATLYHMERGVGEGGASSSGG*SWASSG
Trigger: GCCTGACGATGCCCAGCTTCAGCCCCCTGAGGACGA...TGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297164.8
ENST00000444782.5
CDS-3UTR TCA 90 bp ACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTTCCTTGGAGCGTCCCTaGCGGACAAGTGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TTGRGLLPAATLYHMERGSLERP*RTSGGL
Trigger: GAGGCCTCCACTTGTCCGTCAGGGACGCTCCAAGGA...ACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp CTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCAGTCCTTGGAGCGTCCCTaGCGGACAAGTGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LRGQGAYGAIALGAHHGQSLERP*RTSGGL
Trigger: GAGGCCTCCACTTGTCCGTCAGGGACGCTCCAAGGA...CTGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp ACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTAGGGGGCTGCAGCGGTaGTTTGGTTCTGGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: TTGRGLLPAATLYHMERGRGLQR*FGSGSG
Trigger: GCCGGAACCAGAACCAAATCACCGCTGCAGCCCCCT...ACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444782.5
CDS-3UTR GCA 90 bp TGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGGAAGTGACCACGGCCTaGGCCCGGTTTGGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: CSQLPRSIIWSEVLGKAGEVTTA*ARFGAS
Trigger: GCTTGCCCCAAACCGGGCGCAGGCCGTGGTCACTTC...CCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR GCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCTCCTGCCCTCAGATaGCCCGACCGAGCGGAGAGT +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKAPALR*PDRAES
Trigger: ACTCTCCGCTCGGTCGGGGCATCTGAGGGCAGGAGC...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR GCA 90 bp TCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCAGGAGAGCGTGAGCTCTaGGCGCGCGTGACTGCGCCG +
Preference number: 4 (lower is better)
Translates to: SCAKRAGGLRCYCFRGPPGEREL*ARVTAP
Trigger: CGGCGCAGTCACGCGCGCGCAGAGCTCACGCTCTCC...TGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR GCA 90 bp CTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCAGTCTGGTTCCGGCTTCTaGTGGGGTTCCGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LRGQGAYGAIALGAHHGQSGSGF*WGSGSR
Trigger: CCTGGAGCCGGAACCCCAGCAGAAGCCGGAACCAGA...CTGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCTCTGGTTCCGGCTTCTaGTGGGGTTCCGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: APSCHALSYGARCWGRRGSGSGF*WGSGSR
Trigger: CCTGGAGCCGGAACCCCAGCAGAAGCCGGAACCAGA...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp AGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTCGGGAGCAGAAATCCTaGCTGAGTCAGCGCCCGCAC +
Preference number: 4 (lower is better)
Translates to: RPGPGPLVLRGQGAYGAIREQKS*LSQRPH
Trigger: GTGCGGGCGCTGACTCAGGCAGGATTTCTGCTCCCG...AATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297164.8
CDS-3UTR GCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCCTGGGTTTAGGGGGCTaGAGCTGGGAATGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: APSCHALSYGARCWGRRGLGLGG*SWEWGR
Trigger: CCTCCCCCATTCCCAGCTGCAGCCCCCTAAACCCAG...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000297164.8
CDS-3UTR GCA 90 bp TGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGCAGAGCCCCTCGACGTaGGGCAGCGGTAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: CAKRAGGLRCYCFRGPPRQSPST*GSGSPS
Trigger: AGAAGGGCTACCGCTGCCGCACGTCGAGGGGCTCTG...CCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000297164.8
ENST00000444782.5
CDS-3UTR GCA 90 bp AGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCCTCTTGCTGCGGCTaGAATGGAGGCAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RPGPGPLVLRGQGAYGAIASCCG*NGGKGL
Trigger: CAGCCCCTTGCCTCCATTGCAGCCGCAGCAAGAGGC...AATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp AGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAACATGGCAGGCATCCCTaGCTTGGGCTGCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: RGLLPAATLYHMERGVGEHGRHP*LGLPSP
Trigger: GGGGGAGGGCAGCCCAAGGCAGGGATGCCTGCCATG...TTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp CCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGCCCACCCCCTGGCCCTaGCAGCTGGTAGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: PAPSCHALSYGARCWGRRPTPWP*QLVVHQ
Trigger: CTGATGGACTACCAGCTGGCAGGGCCAGGGGGTGGG...CCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTAGCGGCTGGATGGGATaGCTCGGCTTCCCGAGGATC +
Preference number: 4 (lower is better)
Translates to: HGQGPAPSCHALSYGARCSGWMG*LGFPRI
Trigger: GATCCTCGGGAAGCCGAGCCATCCCATCCAGCCGCT...ACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp CCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGGAGCGGCTGGATGGGATaGCTCGGCTTCCCGAGGATC +
Preference number: 4 (lower is better)
Translates to: PSCHALSYGARCWGRRGRSGWMG*LGFPRI
Trigger: GATCCTCGGGAAGCCGAGCCATCCCATCCAGCCGCT...CCTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp GCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGATCTTCTCCGAGGGCTaGGGGAAGCCGGCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: AGACSQLPRSIIWSEVLGIFSEG*GKPAFR
Trigger: GCGGAAAGCCGGCTTCCCCCAGCCCTCGGAGAAGAT...CCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp AGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTATCTTCTCCGAGGGCTaGGGGAAGCCGGCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: RPGPGPLVLRGQGAYGAIIFSEG*GKPAFR
Trigger: GCGGAAAGCCGGCTTCCCCCAGCCCTCGGAGAAGAT...AATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp GGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGATCTTCTCCGAGGGCTaGGGGAAGCCGGCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: GRGLLPAATLYHMERGVGIFSEG*GKPAFR
Trigger: GCGGAAAGCCGGCTTCCCCCAGCCCTCGGAGAAGAT...CCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp GCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCACCTCCGCAGCCGCCCTaGCTTCCCAAATGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: AKRAGGLRCYCFRGPPRAPPQPP*LPKCLH
Trigger: GTGAAGGCATTTGGGAAGCCAGGGCGGCTGCGGAGG...TGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGCCTCCGCAGCCGCCCTaGCTTCCCAAATGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: AGACSQLPRSIIWSEVLGPPQPP*LPKCLH
Trigger: GTGAAGGCATTTGGGAAGCCAGGGCGGCTGCGGAGG...CCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp AGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGGCAACTCCGGCCCTaGGTCAGGGAGATCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RGLLPAATLYHMERGVGEGQLRP*VREIAS
Trigger: GGAGGCGATCTCCCTGACCCAGGGCCGGAGTTGCCC...TTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGAGAAGGATGCGGGCTaGCTGAGAGCGGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKEKDAG*LRAVAG
Trigger: GCCTGCCACCGCTCTCAGCCAGCCCGCATCCTTCTC...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GAAGGCCAGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGAGGTGGCATCCACACTaGACAGCTGCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: EGQARAWASCAKRAGGLRRWHPH*TAALSL
Trigger: AAGGGACAGTGCAGCTGTCCAGTGTGGATGCCACCT...CCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCTGGCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
CDS-3UTR CCA 90 bp GCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCACCACAGAGAACACAGTaGTCTCCCCTGTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: AKRAGGLRCYCFRGPPRAPQRTQ*SPLSGG
Trigger: GCCCCCGGACAGGGGAGACCACTGTGTTCTCTGTGG...TGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGCCTCTCCATaGCAGGCATCCCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GLLPAATLYHMERGVGEGGAASP*QASLPW
Trigger: CCAAGGCAGGGATGCCTGCCATGGAGAGGCTGCCCC...GCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGGGGCAGCCTCTCCATaGCAGGCATCCCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: LPAATLYHMERGVGEGGAGAASP*QASLPW
Trigger: CCAAGGCAGGGATGCCTGCCATGGAGAGGCTGCCCC...TGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTGGCAGTGCTGTCCAGTaGAGGGGAGGGCTTTCACGC +
Preference number: 4 (lower is better)
Translates to: HGQGPAPSCHALSYGARCGSAVQ*RGGLSR
Trigger: GCGTGAAAGCCCTCCCCTCCACTGGACAGCACTGCC...ACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp ACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTAGCTGGTCCCTCAGCTaGGGGGCAGTGCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: TTGRGLLPAATLYHMERGSWSLS*GAVLSS
Trigger: ACTGGACAGCACTGCCCCCCAGCTGAGGGACCAGCT...ACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp TCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGGGCCAGGCCAGGGCCTaGGCCTCTTGTGCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: SQLPRSIIWSEVLGKAGQGQARA*ASCAKR
Trigger: CCTCTTAGCACAAGAGGCCCAGGCCCTGGCCTGGCC...CTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
CDS-3UTR CCA 90 bp TGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGGGCCAGGCCAGGGCCTaGGCCTCTTGTGCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: CSQLPRSIIWSEVLGKAGGQARA*ASCAKR
Trigger: CCTCTTAGCACAAGAGGCCCAGGCCCTGGCCTGGCC...CCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
CDS-3UTR CCA 90 bp GGCCCACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGCGGTGATTTGGTTCTaGTTCCGGCTTCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GPPRAGACSQLPRSIIWSAVIWF*FRLLLG
Trigger: CCCCAGCAGAAGCCGGAACCAGAACCAAATCACCGC...GCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444782.5
CDS-3UTR TCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGAGCTTCCTAGAGAAGTaGCCACGGCCTGCGCCCGGT +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKSFLEK*PRPAPG
Trigger: ACCGGGCGCAGGCCGTGGTCACTTCTCTAGGAAGCT...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR TCA 90 bp TGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGGCTTTCCGCACCTTTaGGGGACGGAGTGGCGGGAT +
Preference number: 4 (lower is better)
Translates to: CAKRAGGLRCYCFRGPPRGFPHL*GTEWRD
Trigger: ATCCCGCCACTCCGTCCCTCAAAGGTGCGGAAAGCC...CCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR TCA 90 bp TGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGCCGACCCGGTACCGGTaGTTTGGTTCTGGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: CAKRAGGLRCYCFRGPPRPTRYR*FGSGSG
Trigger: GCCGGAACCAGAACCAAATCACCGGTACCGGGTCGG...CCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297164.8
CDS-3UTR TCA 90 bp TGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGTCCTTGGAGCGTCCCTaGCGGACAAGTGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: CSQLPRSIIWSEVLGKAGSLERP*RTSGGL
Trigger: GAGGCCTCCACTTGTCCGTCAGGGACGCTCCAAGGA...CCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp GGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCCTGAGGCCCCCAGCCTaGGACTGTGCAACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GLLPAATLYHMERGVGEGLRPPA*DCATPG
Trigger: ACCTGGAGTTGCACAGTCTCAGGCTGGGGGCCTCAG...GCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp TGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGCTGAGGCCCCCAGCCTaGGACTGTGCAACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: CAKRAGGLRCYCFRGPPRLRPPA*DCATPG
Trigger: ACCTGGAGTTGCACAGTCTCAGGCTGGGGGCCTCAG...CCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp CCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACGAGACTGAGGGGCTGTaGCCTCTCCTGAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PLVLRGQGAYGAIALGAHETEGL*PLLRPP
Trigger: TGGGGGCCTCAGGAGAGGTCACAGCCCCTCAGTCTC...GTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp AGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGAGACTGAGGGGCTGTaGCCTCTCCTGAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RGLLPAATLYHMERGVGEETEGL*PLLRPP
Trigger: TGGGGGCCTCAGGAGAGGTCACAGCCCCTCAGTCTC...TTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp AGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTCTCAGCCGGTACCGGTaGTTTGGTTCTGGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: RPGPGPLVLRGQGAYGAILSRYR*FGSGSG
Trigger: GCCGGAACCAGAACCAAATCACCGGTACCGGCTGAG...AATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp TGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCGAAGTGACCACGGCCTaGGCCCGGTTTGGGGCAAGC +
Preference number: 4 (lower is better)
Translates to: WASCAKRAGGLRCYCFRGEVTTA*ARFGAS
Trigger: GCTTGCCCCAAACCGGGCGCAGGCCGTGGTCACTTC...GCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR GCA 90 bp AGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTCCCTGGCTTCCCAAATaGCTTCACCCGTCGCGGGCC +
Preference number: 4 (lower is better)
Translates to: RAWASCAKRAGGLRCYCFPWLPK*LHPSRA
Trigger: GGCCCGCGACGGGTGAAGGCATTTGGGAAGCCAGGG...AAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR GCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCCTCTTGCTGCGGCTaGAATGGAGGCAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKASCCG*NGGKGL
Trigger: CAGCCCCTTGCCTCCATTGCAGCCGCAGCAAGAGGC...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp GCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCAGTGGAGGCCTCTTGCTaGGGCTGCAATGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: AKRAGGLRCYCFRGPPRAVEASC*GCNGGK
Trigger: CTTGCCTCCATTGCAGCCGCAGCAAGAGGCCTCCAC...TGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp CCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCCCACCCCCTGGCCCTaGCAGCTGGTAGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: PLVLRGQGAYGAIALGAHPTPWP*QLVVHQ
Trigger: CTGATGGACTACCAGCTGGCAGGGCCAGGGGGTGGG...GTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp AGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGGCCTACGGTGCTATTaGTTTAGGGGCCCACCACGG +
Preference number: 4 (lower is better)
Translates to: RPGPGPLVLRGQGAYGAIGLRCY*FRGPPR
Trigger: CCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCC...AATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCGCAGGGGGCCTACGGTaGTATTGCTTTAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: APSCHALSYGARCWGRRGAGGLR*YCFRGP
Trigger: TGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGC...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp CACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTGCAGGGGGCCTACGGTaGTATTGCTTTAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: HGQGPAPSCHALSYGARCAGGLR*YCFRGP
Trigger: TGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGC...ACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGCCGGCCGGAGACAAATaGCCCTCGCATCCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: PAPSCHALSYGARCWGRRPAGDK*PSHPRS
Trigger: GCTCCTAGGATGCGAGGGCCATTTGTCTCCGGCCGG...CCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp TGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGTCTATCCGGTACGCCTaGCGCAGCTCCTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: CAKRAGGLRCYCFRGPPRSIRYA*RSSCPQ
Trigger: CTGAGGGCAGGAGCTGCGCCAGGCGTACCGGATAGA...CCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp GCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCAACAGGCGGTCCGGCGTaGGTGTTGTCCACTGGTCTA +
Preference number: 4 (lower is better)
Translates to: AKRAGGLRCYCFRGPPRATGGPA*VLSTGL
Trigger: TAGACCAGTGGACAACACCCACGCCGGACCGCCTGT...TGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp GGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGACAGGCGGTCCGGCGTaGGTGTTGTCCACTGGTCTA +
Preference number: 4 (lower is better)
Translates to: GRGLLPAATLYHMERGVGTGGPA*VLSTGL
Trigger: TAGACCAGTGGACAACACCCACGCCGGACCGCCTGT...CCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp TGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGCCTCCGCAGCCGCCCTaGCTTCCCAAATGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: CAKRAGGLRCYCFRGPPRPPQPP*LPKCLH
Trigger: GTGAAGGCATTTGGGAAGCCAGGGCGGCTGCGGAGG...CCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp TGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCCTCCGCAGCCGCCCTaGCTTCCCAAATGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: CSQLPRSIIWSEVLGKAGPPQPP*LPKCLH
Trigger: GTGAAGGCATTTGGGAAGCCAGGGCGGCTGCGGAGG...CCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp AGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTGAGAAGGATGCGGGCTaGCTGAGAGCGGTGGCAGGC +
Preference number: 4 (lower is better)
Translates to: RAWASCAKRAGGLRCYCFEKDAG*LRAVAG
Trigger: GCCTGCCACCGCTCTCAGCCAGCCCGCATCCTTCTC...AAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GGCCCACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCCCGGTACCGGTGATTTaGTTCTGGTTCCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GPPRAGACSQLPRSIIWSPVPVI*FWFRLL
Trigger: CAGAAGCCGGAACCAGAACCAAATCACCGGTACCGG...GCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTTGCTGCGGCTGCAATaGAGGCAAGGGGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: HGQGPAPSCHALSYGARCLLRLQ*RQGAAE
Trigger: CTCTGCAGCCCCTTGCCTCCATTGCAGCCGCAGCAA...ACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGTCCCTGACGGACAAGTaGAGGCCTCTTGCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: AGACSQLPRSIIWSEVLGSLTDK*RPLAAA
Trigger: AGCCGCAGCAAGAGGCCTCCACTTGTCCGTCAGGGA...CCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp TCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGCCACAGAGAACACAGTaGTCTCCCCTGTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SQLPRSIIWSEVLGKAGQPQRTQ*SPLSGG
Trigger: GCCCCCGGACAGGGGAGACCACTGTGTTCTCTGTGG...CTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp TGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCCACAGAGAACACAGTaGTCTCCCCTGTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: CSQLPRSIIWSEVLGKAGPQRTQ*SPLSGG
Trigger: GCCCCCGGACAGGGGAGACCACTGTGTTCTCTGTGG...CCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGCCCAGCTCCTGTCTGTaGGGGAGCCATCACGGTGTT +
Preference number: 4 (lower is better)
Translates to: GRGLLPAATLYHMERGVGPSSCL*GSHHGV
Trigger: AACACCGTGATGGCTCCCCCACAGACAGGAGCTGGG...CCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCATCCGGCCCTCAGTGTTaGCTCTGCAGAAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AKRAGGLRCYCFRGPPRASGPQC*LCRSSG
Trigger: CCCAGAGCTTCTGCAGAGCCAACACTGAGGGCCGGA...TGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCAGTCCGGCCCTCAGTGTTaGCTCTGCAGAAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LRGQGAYGAIALGAHHGQSGPQC*LCRSSG
Trigger: CCCAGAGCTTCTGCAGAGCCAACACTGAGGGCCGGA...CTGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGTGCTGTCCAGTaGAGGGGAGGGCTTTCACGC +
Preference number: 4 (lower is better)
Translates to: PAPSCHALSYGARCWGRRGSAVQ*RGGLSR
Trigger: GCGTGAAAGCCCTCCCCTCCACTGGACAGCACTGCC...CCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGAGCTGGTCCCTCAGCTaGGGGGCAGTGCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKSWSLS*GAVLSS
Trigger: ACTGGACAGCACTGCCCCCCAGCTGAGGGACCAGCT...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp AGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCTTTCCGCACCTTTaGGGGACGGAGTGGCGGGAT +
Preference number: 4 (lower is better)
Translates to: RGLLPAATLYHMERGVGEGFPHL*GTEWRD
Trigger: ATCCCGCCACTCCGTCCCTCAAAGGTGCGGAAAGCC...TTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR TCA 90 bp TGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCAGCAGAAATCCTGCCTaGGTCAGCGCCCGCACCTCC +
Preference number: 4 (lower is better)
Translates to: WASCAKRAGGLRCYCFRGSRNPA*VSARTS
Trigger: GGAGGTGCGGGCGCTGACTCAGGCAGGATTTCTGCT...GCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000297164.8
CDS-3UTR TCA 90 bp AGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAATCCTTGGAGCGTCCCTaGCGGACAAGTGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RGLLPAATLYHMERGVGESLERP*RTSGGL
Trigger: GAGGCCTCCACTTGTCCGTCAGGGACGCTCCAAGGA...TTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp GGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCCTCAGCCGGTACCGGTaGTTTGGTTCTGGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: GLLPAATLYHMERGVGEGLSRYR*FGSGSG
Trigger: GCCGGAACCAGAACCAAATCACCGGTACCGGCTGAG...GCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCTGTCCGGGCCAGGAGTaGTGTTTCGCCTTTCGGCAA +
Preference number: 4 (lower is better)
Translates to: APSCHALSYGARCWGRRGCPGQE*CFAFRQ
Trigger: TTGCCGAAAGGCGAAACAGCACTCCTGGCCCGGACA...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297164.8
CDS-3UTR GCA 90 bp CCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACGCCTCTTGCTGCGGCTaGAATGGAGGCAAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLVLRGQGAYGAIALGAHASCCG*NGGKGL
Trigger: CAGCCCCTTGCCTCCATTGCAGCCGCAGCAAGAGGC...GTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp TGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGTGGAGGCCTCTTGCTaGGGCTGCAATGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: CAKRAGGLRCYCFRGPPRVEASC*GCNGGK
Trigger: CTTGCCTCCATTGCAGCCGCAGCAAGAGGCCTCCAC...CCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp CCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGCAAGTGGAGGCCTCTTaGTGCGGCTGCAATGGAGGC +
Preference number: 4 (lower is better)
Translates to: PAPSCHALSYGARCWGRRQVEAS*CGCNGG
Trigger: GCCTCCATTGCAGCCGCAGCAAGAGGCCTCCACTTG...CCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp TCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGCAAGTGGAGGCCTCTTaGTGCGGCTGCAATGGAGGC +
Preference number: 4 (lower is better)
Translates to: SQLPRSIIWSEVLGKAGQQVEAS*CGCNGG
Trigger: GCCTCCATTGCAGCCGCAGCAAGAGGCCTCCACTTG...CTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGCAAGTGGAGGCCTCTTaGTGCGGCTGCAATGGAGGC +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKQVEAS*CGCNGG
Trigger: GCCTCCATTGCAGCCGCAGCAAGAGGCCTCCACTTG...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp GCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGCCTCAGTGTTGGCTCTaGAGAAGCTCTGGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: AGACSQLPRSIIWSEVLGPQCWL*RSSGVP
Trigger: GGGAACCCCAGAGCTTCTGCAGAGCCAACACTGAGG...CCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp AGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTCCTCAGTGTTGGCTCTaGAGAAGCTCTGGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: RPGPGPLVLRGQGAYGAIPQCWL*RSSGVP
Trigger: GGGAACCCCAGAGCTTCTGCAGAGCCAACACTGAGG...AATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp CACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTCCTCAGTGTTGGCTCTaGAGAAGCTCTGGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: HGQGPAPSCHALSYGARCPQCWL*RSSGVP
Trigger: GGGAACCCCAGAGCTTCTGCAGAGCCAACACTGAGG...ACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCGGGCCTGCTCCCAGCTaGCACGCTCTATCATATGGA +
Preference number: 4 (lower is better)
Translates to: APSCHALSYGARCWGRRGGPAPS*HALSYG
Trigger: TCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCC...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp CCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCCTACGGTGCTATTaGTTTAGGGGCCCACCACGG +
Preference number: 4 (lower is better)
Translates to: PAPSCHALSYGARCWGRRGLRCY*FRGPPR
Trigger: CCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCC...CCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp GGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGCAGGGGGCCTACGGTaGTATTGCTTTAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GLLPAATLYHMERGVGEGAGGLR*YCFRGP
Trigger: TGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGC...GCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp TGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCGGCCGGAGACAAATaGCCCTCGCATCCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: WASCAKRAGGLRCYCFRGPAGDK*PSHPRS
Trigger: GCTCCTAGGATGCGAGGGCCATTTGTCTCCGGCCGG...GCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp GGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCTTTGGGGCAAGCGGCTaGATGGGATGGCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: GLLPAATLYHMERGVGEGFGASG*MGWLGF
Trigger: GAAGCCGAGCCATCCCATCCAGCCGCTTGCCCCAAA...GCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGTTTGGGGCAAGCGGCTaGATGGGATGGCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKFGASG*MGWLGF
Trigger: GAAGCCGAGCCATCCCATCCAGCCGCTTGCCCCAAA...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp GCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCATCTATCCGGTACGCCTaGCGCAGCTCCTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: ASCAKRAGGLRCYCFRGPSIRYA*RSSCPQ
Trigger: CTGAGGGCAGGAGCTGCGCCAGGCGTACCGGATAGA...TGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCCCGGTGATTTGGTTCTaGTTCCGGCTTCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: APSCHALSYGARCWGRRGPVIWF*FRLLLG
Trigger: CCCCAGCAGAAGCCGGAACCAGAACCAAATCACCGG...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCAGGCTGCAGCTGGGAATaGGGGAGGGGTAGGAATGCC +
Preference number: 4 (lower is better)
Translates to: ASCAKRAGGLRCYCFRGPGCSWE*GRGRNA
Trigger: GGCATTCCTACCCCTCCCCCATTCCCAGCTGCAGCC...TGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000297164.8
CDS-3UTR CCA 90 bp CTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCATTGCTGCGGCTGCAATaGAGGCAAGGGGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: LPAATLYHMERGVGEGGALLRLQ*RQGAAE
Trigger: CTCTGCAGCCCCTTGCCTCCATTGCAGCCGCAGCAA...TGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp TGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGTCCCTGACGGACAAGTaGAGGCCTCTTGCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: CAKRAGGLRCYCFRGPPRSLTDK*RPLAAA
Trigger: AGCCGCAGCAAGAGGCCTCCACTTGTCCGTCAGGGA...CCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGTCCCTGACGGACAAGTaGAGGCCTCTTGCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKSLTDK*RPLAAA
Trigger: AGCCGCAGCAAGAGGCCTCCACTTGTCCGTCAGGGA...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GGCCCACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGGCTTTTTCCTTCCTTaGAGCGTCCCTGACGGACAA +
Preference number: 4 (lower is better)
Translates to: GPPRAGACSQLPRSIIWSGFFLP*SVPDGQ
Trigger: TTGTCCGTCAGGGACGCTCCAAGGAAGGAAAAAGCC...GCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGTGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCCACAGAGAACACAGTaGTCTCCCCTGTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: PLVLRGQGAYGAIALGAHPQRTQ*SPLSGG
Trigger: GCCCCCGGACAGGGGAGACCACTGTGTTCTCTGTGG...GTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGCCCAGCTCCTGTCTGTaGGGGAGCCATCACGGTGTT +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKPSSCL*GSHHGV
Trigger: AACACCGTGATGGCTCCCCCACAGACAGGAGCTGGG...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCACCCAGCTCCTGTCTGTaGGGGAGCCATCACGGTGTT +
Preference number: 4 (lower is better)
Translates to: LPAATLYHMERGVGEGGAPSSCL*GSHHGV
Trigger: AACACCGTGATGGCTCCCCCACAGACAGGAGCTGGG...TGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGTCCGGCCCTCAGTGTTaGCTCTGCAGAAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKSGPQC*LCRSSG
Trigger: CCCAGAGCTTCTGCAGAGCCAACACTGAGGGCCGGA...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGCATTTGCCTCTTGAGTaGGCAGCCCTGGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKHLPLE*AALGLG
Trigger: GCCCAAGCCCAGGGCTGCCCACTCAAGAGGCAAATG...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp TGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCATTTGCCTCTTGAGTaGGCAGCCCTGGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: CSQLPRSIIWSEVLGKAGHLPLE*AALGLG
Trigger: GCCCAAGCCCAGGGCTGCCCACTCAAGAGGCAAATG...CCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACGGCAGTGCTGTCCAGTaGAGGGGAGGGCTTTCACGC +
Preference number: 4 (lower is better)
Translates to: PLVLRGQGAYGAIALGAHGSAVQ*RGGLSR
Trigger: GCGTGAAAGCCCTCCCCTCCACTGGACAGCACTGCC...GTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp TGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCAGCTGGTCCCTCAGCTaGGGGGCAGTGCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: WASCAKRAGGLRCYCFRGSWSLS*GAVLSS
Trigger: ACTGGACAGCACTGCCCCCCAGCTGAGGGACCAGCT...GCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp CCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGGAGCCTACCAGGCCCATaGGGAAGAAGACCAGCACAA +
Preference number: 4 (lower is better)
Translates to: PSCHALSYGARCWGRRGRSLPGP*GRRPAQ
Trigger: TTGTGCTGGTCTTCTTCCTCATGGGCCTGGTAGGCT...CCTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297164.8
ENST00000444782.5
CDS-3UTR GCA 90 bp CCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACGTGGAGGCCTCTTGCTaGGGCTGCAATGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: PLVLRGQGAYGAIALGAHVEASC*GCNGGK
Trigger: CTTGCCTCCATTGCAGCCGCAGCAAGAGGCCTCCAC...GTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp AGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTGTGGAGGCCTCTTGCTaGGGCTGCAATGGAGGCAAG +
Preference number: 4 (lower is better)
Translates to: RAWASCAKRAGGLRCYCFVEASC*GCNGGK
Trigger: CTTGCCTCCATTGCAGCCGCAGCAAGAGGCCTCCAC...AAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp CCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGTGTCACCCGGAACCTaGCCACAGAGAACACAGTGG +
Preference number: 4 (lower is better)
Translates to: PAPSCHALSYGARCWGRRVSPGT*PQRTQW
Trigger: CCACTGTGTTCTCTGTGGGCAGGTTCCGGGTGACAC...CCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp TCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGCCTCAGTGTTGGCTCTaGAGAAGCTCTGGGGTTCCC +
Preference number: 4 (lower is better)
Translates to: SQLPRSIIWSEVLGKAGQPQCWL*RSSGVP
Trigger: GGGAACCCCAGAGCTTCTGCAGAGCCAACACTGAGG...CTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp TCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGGGGCCTGCTCCCAGCTaGCACGCTCTATCATATGGA +
Preference number: 4 (lower is better)
Translates to: SQLPRSIIWSEVLGKAGQGPAPS*HALSYG
Trigger: TCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCC...CTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp CTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGGGCCTGCTCCCAGCTaGCACGCTCTATCATATGGA +
Preference number: 4 (lower is better)
Translates to: LPAATLYHMERGVGEGGAGPAPS*HALSYG
Trigger: TCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCC...TGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp TGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGGGCCTGCTCCCAGCTaGCACGCTCTATCATATGGA +
Preference number: 4 (lower is better)
Translates to: CAKRAGGLRCYCFRGPPRGPAPS*HALSYG
Trigger: TCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCC...CCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp TGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCGCAGGGGGCCTACGGTaGTATTGCTTTAGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: WASCAKRAGGLRCYCFRGAGGLR*YCFRGP
Trigger: TGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGC...GCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACTTTGGGGCAAGCGGCTaGATGGGATGGCTCGGCTTC +
Preference number: 4 (lower is better)
Translates to: PLVLRGQGAYGAIALGAHFGASG*MGWLGF
Trigger: GAAGCCGAGCCATCCCATCCAGCCGCTTGCCCCAAA...GTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp TCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGGTGGGTGTTGTCCACTaGTCTATCCGGTACGCCTGG +
Preference number: 4 (lower is better)
Translates to: SQLPRSIIWSEVLGKAGQVGVVH*SIRYAW
Trigger: CCAGGCGTACCGGATAGACCAGTGGACAACACCCAC...CTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp CTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCACACTGCAGCACGAGATaGGACGGCATTCTTAGGCGG +
Preference number: 4 (lower is better)
Translates to: LPAATLYHMERGVGEGGAHCSTR*DGILRR
Trigger: CCGCCTAAGAATGCCGTCCCATCTCGTGCTGCAGTG...TGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000297164.8
CDS-3UTR CCA 90 bp GGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGAGGTGGCATCCACACTaGACAGCTGCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GRGLLPAATLYHMERGVGRWHPH*TAALSL
Trigger: AAGGGACAGTGCAGCTGTCCAGTGTGGATGCCACCT...CCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp AGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAATTGCTGCGGCTGCAATaGAGGCAAGGGGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: RGLLPAATLYHMERGVGELLRLQ*RQGAAE
Trigger: CTCTGCAGCCCCTTGCCTCCATTGCAGCCGCAGCAA...TTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACTTGCTGCGGCTGCAATaGAGGCAAGGGGCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: PLVLRGQGAYGAIALGAHLLRLQ*RQGAAE
Trigger: CTCTGCAGCCCCTTGCCTCCATTGCAGCCGCAGCAA...GTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCATCCCTGACGGACAAGTaGAGGCCTCTTGCTGCGGCT +
Preference number: 4 (lower is better)
Translates to: ASCAKRAGGLRCYCFRGPSLTDK*RPLAAA
Trigger: AGCCGCAGCAAGAGGCCTCCACTTGTCCGTCAGGGA...TGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp AGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAACCCAGCTCCTGTCTGTaGGGGAGCCATCACGGTGTT +
Preference number: 4 (lower is better)
Translates to: RGLLPAATLYHMERGVGEPSSCL*GSHHGV
Trigger: AACACCGTGATGGCTCCCCCACAGACAGGAGCTGGG...TTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCAGGCTCTGCAGAAGCTCTaGGGTTCCCTTCAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: LRGQGAYGAIALGAHHGQALQKL*GSLQVH
Trigger: GTGCACTTGAAGGGAACCCCAGAGCTTCTGCAGAGC...CTGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTGCTCTGCAGAAGCTCTaGGGTTCCCTTCAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: HGQGPAPSCHALSYGARCALQKL*GSLQVH
Trigger: GTGCACTTGAAGGGAACCCCAGAGCTTCTGCAGAGC...ACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp ACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGCTCTGCAGAAGCTCTaGGGTTCCCTTCAAGTGCAC +
Preference number: 4 (lower is better)
Translates to: TTGRGLLPAATLYHMERGALQKL*GSLQVH
Trigger: GTGCACTTGAAGGGAACCCCAGAGCTTCTGCAGAGC...ACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp AGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTTCCGGCCCTCAGTGTTaGCTCTGCAGAAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RAWASCAKRAGGLRCYCFSGPQC*LCRSSG
Trigger: CCCAGAGCTTCTGCAGAGCCAACACTGAGGGCCGGA...AAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp TGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCATTTGCCTCTTGAGTaGGCAGCCCTGGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: WASCAKRAGGLRCYCFRGHLPLE*AALGLG
Trigger: GCCCAAGCCCAGGGCTGCCCACTCAAGAGGCAAATG...GCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp AGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAACATTTGCCTCTTGAGTaGGCAGCCCTGGGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: RGLLPAATLYHMERGVGEHLPLE*AALGLG
Trigger: GCCCAAGCCCAGGGCTGCCCACTCAAGAGGCAAATG...TTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GAAGGCCAGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGGTGATCAGAAGTGTCTaGTTTGCTTGGCTGCCCATT +
Preference number: 4 (lower is better)
Translates to: EGQARAWASCAKRAGGLRVIRSV*FAWLPI
Trigger: AATGGGCAGCCAAGCAAACCAGACACTTCTGATCAC...CCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCTGGCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
CDS-3UTR CCA 90 bp GCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGGCTGCAGCGGTGATTTaGTTCTGGTTCCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: AGACSQLPRSIIWSEVLGAAAVI*FWFRLL
Trigger: CAGAAGCCGGAACCAGAACCAAATCACCGCTGCAGC...CCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444782.5
CDS-3UTR TCA 90 bp CCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGAGCCTACCAGGCCCATaGGGAAGAAGACCAGCACAA +
Preference number: 4 (lower is better)
Translates to: PAPSCHALSYGARCWGRRSLPGP*GRRPAQ
Trigger: TTGTGCTGGTCTTCTTCCTCATGGGCCTGGTAGGCT...CCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000297164.8
ENST00000444782.5
CDS-3UTR TCA 90 bp GGCCCACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCAGTCCATCAGCACAATaGAGGAGACTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: GPPRAGACSQLPRSIIWSSPSAQ*RRLTYS
Trigger: GGAGTATGTGAGTCTCCTTCATTGTGCTGATGGACT...GCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
CDS-3UTR GCA 90 bp AGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGTGTCACCCGGAACCTaGCCACAGAGAACACAGTGG +
Preference number: 4 (lower is better)
Translates to: RGLLPAATLYHMERGVGEVSPGT*PQRTQW
Trigger: CCACTGTGTTCTCTGTGGGCAGGTTCCGGGTGACAC...TTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp GCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCAGTGTCACCCGGAACCTaGCCACAGAGAACACAGTGG +
Preference number: 4 (lower is better)
Translates to: ASCAKRAGGLRCYCFRGPVSPGT*PQRTQW
Trigger: CCACTGTGTTCTCTGTGGGCAGGTTCCGGGTGACAC...TGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp TCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCAGGCCTACGGTGCTATTaGTTTAGGGGCCCACCACGG +
Preference number: 4 (lower is better)
Translates to: SCAKRAGGLRCYCFRGPPGLRCY*FRGPPR
Trigger: CCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCC...TGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp AGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTGTGGGTGTTGTCCACTaGTCTATCCGGTACGCCTGG +
Preference number: 4 (lower is better)
Translates to: RAWASCAKRAGGLRCYCFVGVVH*SIRYAW
Trigger: CCAGGCGTACCGGATAGACCAGTGGACAACACCCAC...AAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CCA 90 bp TGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCGGTGATTTGGTTCTaGTTCCGGCTTCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: WASCAKRAGGLRCYCFRGPVIWF*FRLLLG
Trigger: CCCCAGCAGAAGCCGGAACCAGAACCAAATCACCGG...GCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCGGTGATTTGGTTCTaGTTCCGGCTTCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ASCAKRAGGLRCYCFRGPPVIWF*FRLLLG
Trigger: CCCCAGCAGAAGCCGGAACCAGAACCAAATCACCGG...TGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGGCTTTTTCCTTCCTTaGAGCGTCCCTGACGGACAA +
Preference number: 4 (lower is better)
Translates to: GRGLLPAATLYHMERGVGGFFLP*SVPDGQ
Trigger: TTGTCCGTCAGGGACGCTCCAAGGAAGGAAAAAGCC...CCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp ACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGGCTTTTTCCTTCCTTaGAGCGTCCCTGACGGACAA +
Preference number: 4 (lower is better)
Translates to: TTGRGLLPAATLYHMERGGFFLP*SVPDGQ
Trigger: TTGTCCGTCAGGGACGCTCCAAGGAAGGAAAAAGCC...ACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGCCACGCTCTATCATATaGAGCGAGGTGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: AGACSQLPRSIIWSEVLGPRSII*SEVLGK
Trigger: CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGG...CCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGGCCACGCTCTATCATATaGAGCGAGGTGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: PSCHALSYGARCWGRRGRPRSII*SEVLGK
Trigger: CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGG...CCTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCCCACGCTCTATCATATaGAGCGAGGTGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: APSCHALSYGARCWGRRGPRSII*SEVLGK
Trigger: CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGG...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp CCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGGGGTAGAGACACCTGGTaGTCAGAAGTGTCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: PSCHALSYGARCWGRRGRGRDTW*SEVSGL
Trigger: CAAACCAGACACTTCTGATCACCAGGTGTCTCTACC...CCTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
CDS-3UTR TCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCGGTAGAGACACCTGGTaGTCAGAAGTGTCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: APSCHALSYGARCWGRRGGRDTW*SEVSGL
Trigger: CAAACCAGACACTTCTGATCACCAGGTGTCTCTACC...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
CDS-3UTR CCA 90 bp AGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTCCGGTACCGGTGATTTaGTTCTGGTTCCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RAWASCAKRAGGLRCYCFPVPVI*FWFRLL
Trigger: CAGAAGCCGGAACCAGAACCAAATCACCGGTACCGG...AAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCGGTACCGGTGATTTaGTTCTGGTTCCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: ASCAKRAGGLRCYCFRGPPVPVI*FWFRLL
Trigger: CAGAAGCCGGAACCAGAACCAAATCACCGGTACCGG...TGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp AGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAAGGTGGCATCCACACTaGACAGCTGCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RGLLPAATLYHMERGVGERWHPH*TAALSL
Trigger: AAGGGACAGTGCAGCTGTCCAGTGTGGATGCCACCT...TTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACAGGTGGCATCCACACTaGACAGCTGCACTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: PLVLRGQGAYGAIALGAHRWHPH*TAALSL
Trigger: AAGGGACAGTGCAGCTGTCCAGTGTGGATGCCACCT...GTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp TGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGGGCTTTTTCCTTCCTTaGAGCGTCCCTGACGGACAA +
Preference number: 4 (lower is better)
Translates to: CSQLPRSIIWSEVLGKAGGFFLP*SVPDGQ
Trigger: TTGTCCGTCAGGGACGCTCCAAGGAAGGAAAAAGCC...CCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCACCACGCTCTATCATATaGAGCGAGGTGTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LPAATLYHMERGVGEGGAPRSII*SEVLGK
Trigger: CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGG...TGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCTGGCTTCATTCTGGATaGTGCAGCGAACAATCCTCT +
Preference number: 4 (lower is better)
Translates to: APSCHALSYGARCWGRRGWLHSG*CSEQSS
Trigger: AGAGGATTGTTCGCTGCATCATCCAGAATGAAGCCA...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp AGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTTGGCTTCATTCTGGATaGTGCAGCGAACAATCCTCT +
Preference number: 4 (lower is better)
Translates to: RPGPGPLVLRGQGAYGAIWLHSG*CSEQSS
Trigger: AGAGGATTGTTCGCTGCATCATCCAGAATGAAGCCA...AATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp GCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAGTCCATCAGCACAATaGAGGAGACTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: AGACSQLPRSIIWSEVLGSPSAQ*RRLTYS
Trigger: GGAGTATGTGAGTCTCCTTCATTGTGCTGATGGACT...CCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
CDS-3UTR TCA 90 bp AGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTAGTCCATCAGCACAATaGAGGAGACTGGTGATCAGA +
Preference number: 4 (lower is better)
Translates to: RPGPGPLVLRGQGAYGAISPSAQ*RRLVIR
Trigger: TCTGATCACCAGTCTCCTTCATTGTGCTGATGGACT...AATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521367.5
CDS-3UTR GCA 90 bp GGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCCAGAAGTGTCTGGTTTaGTTGGCTGCCCATTTGCCT +
Preference number: 4 (lower is better)
Translates to: GLLPAATLYHMERGVGEGQKCLV*LAAHLP
Trigger: AGGCAAATGGGCAGCCAAGCAAACCAGACACTTCTG...GCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGCAGAAGTGTCTGGTTTaGTTGGCTGCCCATTTGCCT +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKQKCLV*LAAHLP
Trigger: AGGCAAATGGGCAGCCAAGCAAACCAGACACTTCTG...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR GCA 90 bp TCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACTGGGTTTAGGGGGCTaGAGCGGTGATTTGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SCAKRAGGLRCYCFRGPPLGLGG*SGDLVL
Trigger: CAGAACCAAATCACCGCTGCAGCCCCCTAAACCCAG...TGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000444782.5
CDS-3UTR CCA 90 bp CCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACATATATAGCCCATGTTaGGGCGGTTCCAGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: PLVLRGQGAYGAIALGAHIYSPC*GGSRSG
Trigger: GCCTGACCTGGAACCGCCCCAACATGGGCTATATAT...GTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297164.8
ENST00000444782.5
CDS-3UTR CCA 90 bp GCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCATTCTTCTTGAGCACGTaGCAGATCATGAAGCCTACC +
Preference number: 4 (lower is better)
Translates to: AKRAGGLRCYCFRGPPRAFFLST*QIMKPT
Trigger: GGTAGGCTTCATGATCTGCCACGTGCTCAAGAAGAA...TGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000297164.8
ENST00000444782.5
CDS-3UTR CCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCTTCTTCTTGAGCACGTaGCAGATCATGAAGCCTACC +
Preference number: 4 (lower is better)
Translates to: APSCHALSYGARCWGRRGFFLST*QIMKPT
Trigger: GGTAGGCTTCATGATCTGCCACGTGCTCAAGAAGAA...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000297164.8
ENST00000444782.5
CDS-3UTR CCA 90 bp GGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGTGATCAGAAGTGTCTaGTTTGCTTGGCTGCCCATT +
Preference number: 4 (lower is better)
Translates to: GRGLLPAATLYHMERGVGVIRSV*FAWLPI
Trigger: AATGGGCAGCCAAGCAAACCAGACACTTCTGATCAC...CCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp CACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTGTGATCAGAAGTGTCTaGTTTGCTTGGCTGCCCATT +
Preference number: 4 (lower is better)
Translates to: HGQGPAPSCHALSYGARCVIRSV*FAWLPI
Trigger: AATGGGCAGCCAAGCAAACCAGACACTTCTGATCAC...ACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp AGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTGGTAGAGACACCTGGTaGTCAGAAGTGTCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: RAWASCAKRAGGLRCYCFGRDTW*SEVSGL
Trigger: CAAACCAGACACTTCTGATCACCAGGTGTCTCTACC...AAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
CDS-3UTR CCA 90 bp GCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCGCATTGGCTTCATTCTaGATGATGCAGCGAACAATC +
Preference number: 4 (lower is better)
Translates to: APSCHALSYGARCWGRRGALASF*MMQRTI
Trigger: GATTGTTCGCTGCATCATCCAGAATGAAGCCAATGC...GCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGTGATCAGAAGTGTCTaGTTTGCTTGGCTGCCCATT +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKVIRSV*FAWLPI
Trigger: AATGGGCAGCCAAGCAAACCAGACACTTCTGATCAC...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp CCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACTGGCTTCATTCTGGATaGTGCAGCGAACAATCCTCT +
Preference number: 4 (lower is better)
Translates to: PLVLRGQGAYGAIALGAHWLHSG*CSEQSS
Trigger: AGAGGATTGTTCGCTGCATCATCCAGAATGAAGCCA...GTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp AGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTTGGCTTCATTCTGGATaGTGCAGCGAACAATCCTCT +
Preference number: 4 (lower is better)
Translates to: RAWASCAKRAGGLRCYCFWLHSG*CSEQSS
Trigger: AGAGGATTGTTCGCTGCATCATCCAGAATGAAGCCA...AAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR TCA 90 bp AGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAAGTCCATCAGCACAATaGAGGAGACTCACATACTCC +
Preference number: 4 (lower is better)
Translates to: RGLLPAATLYHMERGVGESPSAQ*RRLTYS
Trigger: GGAGTATGTGAGTCTCCTTCATTGTGCTGATGGACT...TTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
CDS-3UTR TCA 90 bp GGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGAATGAAGGAGACTGGTaGTCAGAAGTGTCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: GACSQLPRSIIWSEVLGKNEGDW*SEVSGL
Trigger: CAAACCAGACACTTCTGATCACCAGTCTCCTTCATT...CTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521367.5
CDS-3UTR GCA 90 bp TCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACAGAAGTGTCTGGTTTaGTTGGCTGCCCATTTGCCT +
Preference number: 4 (lower is better)
Translates to: SCAKRAGGLRCYCFRGPPQKCLV*LAAHLP
Trigger: AGGCAAATGGGCAGCCAAGCAAACCAGACACTTCTG...TGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CCA 90 bp TCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGGCATTGGCTTCATTCTaGATGATGCAGCGAACAATC +
Preference number: 4 (lower is better)
Translates to: SQLPRSIIWSEVLGKAGQALASF*MMQRTI
Trigger: GATTGTTCGCTGCATCATCCAGAATGAAGCCAATGC...CTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS GCA 90 bp CCTGGGTCAGGGAGATCGCCTCCGCAGCCGCCCTGGCTTCCCAAATaGCTTCACCCGTCGCGGGCCCAGGACCAGGGGGCGGAGCGCAGG +
Preference number: 5 (lower is better)
Translates to: PGSGRSPPQPPWLPK*LHPSRAQDQGAERR
Trigger: CCTGCGCTCCGCCCCCTGGTCCTGGGCCCGCGACGGGTGAAGGCATTTGGGAAGCCAGGGCGGCTGCGGAGGCGATCTCCCTGACCCAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000520674.5
ENST00000521367.5
CDS CCA 90 bp GGCAACTCCGGCCCTGGGTCAGGGAGATCGCCTCCGCAGCCGCCCTaGCTTCCCAAATGCCTTCACCCGTCGCGGGCCCAGGACCAGGGG +
Preference number: 5 (lower is better)
Translates to: GNSGPGSGRSPPQPP*LPKCLHPSRAQDQG
Trigger: CCCCTGGTCCTGGGCCCGCGACGGGTGAAGGCATTTGGGAAGCCAGGGCGGCTGCGGAGGCGATCTCCCTGACCCAGGGCCGGAGTTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000520674.5
ENST00000521367.5
CDS CCA 90 bp GCGGGCTGGCTGAGAGCGGTGGCAGGCTCCGGGCAACTCCGGCCCTaGGTCAGGGAGATCGCCTCCGCAGCCGCCCTGGCTTCCCAAATG +
Preference number: 5 (lower is better)
Translates to: AGWLRAVAGSGQLRP*VREIASAAALASQM
Trigger: CATTTGGGAAGCCAGGGCGGCTGCGGAGGCGATCTCCCTGACCCAGGGCCGGAGTTGCCCGGAGCCTGCCACCGCTCTCAGCCAGCCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000517794.1
ENST00000518025.5
ENST00000518856.1
ENST00000520674.5
ENST00000521367.5
CDS CCA 90 bp TGGGTCCGGGTAGGGGACAGGCGGTCCGGCGTGGGTGTTGTCCACTaGTCTATCCGGTACGCCTGGCGCAGCTCCTGCCCTCAGATGCCC +
Preference number: 5 (lower is better)
Translates to: WVRVGDRRSGVGVVH*SIRYAWRSSCPQMP
Trigger: GGGCATCTGAGGGCAGGAGCTGCGCCAGGCGTACCGGATAGACCAGTGGACAACACCCACGCCGGACCGCCTGTCCCCTACCCGGACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000520674.5
ENST00000521367.5
CDS-3UTR CAA 90 bp GCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGCGGCCTGCGCCCGGTTaGGGGCAAGCGGCTGGATGG +
Preference number: 5 (lower is better)
Translates to: AGACSQLPRSIIWSEVLGRPAPG*GQAAGW
Trigger: CCATCCAGCCGCTTGCCCCAAACCGGGCGCAGGCCG...CCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CAA 90 bp TGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGCGGCCTGCGCCCGGTTaGGGGCAAGCGGCTGGATGG +
Preference number: 5 (lower is better)
Translates to: CAKRAGGLRCYCFRGPPRRPAPG*GQAAGW
Trigger: CCATCCAGCCGCTTGCCCCAAACCGGGCGCAGGCCG...CCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS GCA 90 bp CCGGCCCCACCCCCTACCCAACCAGGGAGCTGTCCGGGCCAGGAGTaGTGTTTCGCCTTTCGGCAAGAGGTCAGCGGCAACGCAAGCTCT +
Preference number: 5 (lower is better)
Translates to: PAPPPTQPGSCPGQE*CFAFRQEVSGNASS
Trigger: AGAGCTTGCGTTGCCGCTGACCTCTTGCCGAAAGGCGAAACAGCACTCCTGGCCCGGACAGCTCCCTGGTTGGGTAGGGGGTGGGGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000518025.5
ENST00000520674.5
CDS CCA 90 bp CAGATGCCCCGACCGAGCGGAGAGTCAGGAATCTTCTCCGAGGGCTaGGGGAAGCCGGCTTTCCGCACCTTTGAGGGACGGAGTGGCGGG +
Preference number: 5 (lower is better)
Translates to: QMPRPSGESGIFSEG*GKPAFRTFEGRSGG
Trigger: CCCGCCACTCCGTCCCTCAAAGGTGCGGAAAGCCGGCTTCCCCCAGCCCTCGGAGAAGATTCCTGACTCTCCGCTCGGTCGGGGCATCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000520674.5
ENST00000521367.5
CDS-3UTR CAA 90 bp GCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACGGCCTGCGCCCGGTTaGGGGCAAGCGGCTGGATGG +
Preference number: 5 (lower is better)
Translates to: ASCAKRAGGLRCYCFRGPRPAPG*GQAAGW
Trigger: CCATCCAGCCGCTTGCCCCAAACCGGGCGCAGGCCG...TGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CAA 90 bp GGCCCACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCTCCGGCGCTCATCCCTaGATTCCTCCCCTCCCCCTT +
Preference number: 5 (lower is better)
Translates to: GPPRAGACSQLPRSIIWSSGAHP*IPPLPL
Trigger: AAGGGGGAGGGGAGGAATCAAGGGATGAGCGCCGGA...GCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGTGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS GCA 90 bp GGAGTGGCGGGATCTTCGGAGCTTCCTAGAGAAGTGACCACGGCCTaGGCCCGGTTTGGGGCAAGCGGCTGGATGGGATGGCTCGGCTTC +
Preference number: 5 (lower is better)
Translates to: GVAGSSELPREVTTA*ARFGASGWMGWLGF
Trigger: GAAGCCGAGCCATCCCATCCAGCCGCTTGCCCCAAACCGGGCGCAGGCCGTGGTCACTTCTCTAGGAAGCTCCGAAGATCCCGCCACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000520674.5
ENST00000521367.5
CDS GCA 90 bp TCCACTGGTCTATCCGGTACGCCTGGCGCAGCTCCTGCCCTCAGATaGCCCGACCGAGCGGAGAGTCAGGAATCTTCTCCGAGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: STGLSGTPGAAPALR*PDRAESQESSPRAG
Trigger: CCCAGCCCTCGGAGAAGATTCCTGACTCTCCGCTCGGTCGGGGCATCTGAGGGCAGGAGCTGCGCCAGGCGTACCGGATAGACCAGTGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000520674.5
ENST00000521367.5
CDS CCA 90 bp TCCCACCCTGACCACCTGGCCGACCCGGTACCGGTGATTTGGTTCTaGTTCCGGCTTCTGCTGGGGTTCCGGCTCCAGGGGCGTCCTAGT +
Preference number: 5 (lower is better)
Translates to: SHPDHLADPVPVIWF*FRLLLGFRLQGRPS
Trigger: ACTAGGACGCCCCTGGAGCCGGAACCCCAGCAGAAGCCGGAACCAGAACCAAATCACCGGTACCGGGTCGGCCAGGTGGTCAGGGTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000518025.5
ENST00000520674.5
CDS CCA 90 bp GGTTTCTCCCACCCTGACCACCTGGCCGACCCGGTACCGGTGATTTaGTTCTGGTTCCGGCTTCTGCTGGGGTTCCGGCTCCAGGGGCGT +
Preference number: 5 (lower is better)
Translates to: GFSHPDHLADPVPVI*FWFRLLLGFRLQGR
Trigger: ACGCCCCTGGAGCCGGAACCCCAGCAGAAGCCGGAACCAGAACCAAATCACCGGTACCGGGTCGGCCAGGTGGTCAGGGTGGGAGAAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000518025.5
ENST00000520674.5
CDS-3UTR CAA 90 bp GGCCCACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCTGCTTGGCTGCCCATTaGCCTCTTGAGTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GPPRAGACSQLPRSIIWSCLAAH*PLEWAA
Trigger: GGCTGCCCACTCAAGAGGCAAATGGGCAGCCAAGCA...GCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS TCA 90 bp ATGCCGTCCTCAGGATCTGAAACAAGCACGTCTAAGACGTCCGGCTaGGGTCCGGCCCCACCCCCTACCCAACCAGGGAGCTGTCCGGGC +
Preference number: 5 (lower is better)
Translates to: MPSSGSETSTSKTSG*GPAPPPTQPGSCPG
Trigger: GCCCGGACAGCTCCCTGGTTGGGTAGGGGGTGGGGCCGGACCTCAGCCGGACGTCTTAGACGTGCTTGTTTCAGATCCTGAGGACGGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000518025.5
ENST00000520674.5
CDS GCA 90 bp GACAAGTGGAGGCCTCTTGCTGCGGCTGCAATGGAGGCAAGGGGCTaGAGAGCCCAGGTGCACTGTGTGATGATGGGAGGGGGCTCCGTC +
Preference number: 5 (lower is better)
Translates to: DKWRPLAAAAMEARG*RAQVHCVMMGGGSV
Trigger: GACGGAGCCCCCTCCCATCATCACACAGTGCACCTGGGCTCTGCAGCCCCTTGCCTCCATTGCAGCCGCAGCAAGAGGCCTCCACTTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000517794.1
ENST00000518025.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CAA 90 bp CCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGGGGTCCGGCGTGGGTGTaGTCCACTGGTCTATCCGGT +
Preference number: 5 (lower is better)
Translates to: PSCHALSYGARCWGRRGRGPAWV*STGLSG
Trigger: ACCGGATAGACCAGTGGACAACACCCACGCCGGACC...CCTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CAA 90 bp ACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTTCCGGCGCTCATCCCTaGATTCCTCCCCTCCCCCTT +
Preference number: 5 (lower is better)
Translates to: TTGRGLLPAATLYHMERGSGAHP*IPPLPL
Trigger: AAGGGGGAGGGGAGGAATCAAGGGATGAGCGCCGGA...ACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CAA 90 bp AGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTCTGCCCATTTGCCTCTaGAGTGGGCAGCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: RPGPGPLVLRGQGAYGAILPICL*SGQPWA
Trigger: AGCCCAGGGCTGCCCACTCAAGAGGCAAATGGGCAG...AATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CAA 90 bp GGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGCTGCCCATTTGCCTCTaGAGTGGGCAGCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: GRGLLPAATLYHMERGVGLPICL*SGQPWA
Trigger: AGCCCAGGGCTGCCCACTCAAGAGGCAAATGGGCAG...CCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CAA 90 bp GGCCCACCACGGGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGGCTGCAGCGGTGATTaGGTTCTGGTTCCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: GPPRAGACSQLPRSIIWSGCSGD*VLVPAS
Trigger: AGAAGCCGGAACCAGAACCAAATCACCGCTGCAGCC...GCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCCCGTGGTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444782.5
CDS TCA 90 bp TTTGGGGCAAGCGGCTGGATGGGATGGCTCGGCTTCCCGAGGATCTaGCCCCCGGCCGGAGACAAATGGCCCTCGCATCCTAGGAGCTAT +
Preference number: 5 (lower is better)
Translates to: FGASGWMGWLGFPRI*PPAGDKWPSHPRSY
Trigger: ATAGCTCCTAGGATGCGAGGGCCATTTGTCTCCGGCCGGGGGTCAGATCCTCGGGAAGCCGAGCCATCCCATCCAGCCGCTTGCCCCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000520674.5
ENST00000521367.5
CDS GCA 90 bp GTGGGTGTTGTCCACTGGTCTATCCGGTACGCCTGGCGCAGCTCCTaGCCTCAGATGCCCCGACCGAGCGGAGAGTCAGGAATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: VGVVHWSIRYAWRSS*PQMPRPSGESGIFS
Trigger: GGAGAAGATTCCTGACTCTCCGCTCGGTCGGGGCATCTGAGGGCAGGAGCTGCGCCAGGCGTACCGGATAGACCAGTGGACAACACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000520674.5
ENST00000521367.5
CDS GCA 90 bp CCTTGGAGCGTCCCTGACGGACAAGTGGAGGCCTCTTGCTGCGGCTaGAATGGAGGCAAGGGGCTGCAGAGCCCAGGTGCACTGTGTGAT +
Preference number: 5 (lower is better)
Translates to: PWSVPDGQVEASCCG*NGGKGLQSPGALCD
Trigger: ATCACACAGTGCACCTGGGCTCTGCAGCCCCTTGCCTCCATTGCAGCCGCAGCAAGAGGCCTCCACTTGTCCGTCAGGGACGCTCCAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000517794.1
ENST00000518025.5
ENST00000518856.1
ENST00000521367.5
CDS GCA 90 bp TTCCTTCCTTGGAGCGTCCCTGACGGACAAGTGGAGGCCTCTTGCTaGGGCTGCAATGGAGGCAAGGGGCTGCAGAGCCCAGGTGCACTG +
Preference number: 5 (lower is better)
Translates to: FLPWSVPDGQVEASC*GCNGGKGLQSPGAL
Trigger: CAGTGCACCTGGGCTCTGCAGCCCCTTGCCTCCATTGCAGCCGCAGCAAGAGGCCTCCACTTGTCCGTCAGGGACGCTCCAAGGAAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000517794.1
ENST00000518025.5
ENST00000518856.1
ENST00000521367.5
CDS CCA 90 bp AGTGCTGTCCAGTGGAGGGGAGGGCTTTCACGCCCACCCACCCCCTaGCCCTGCCAGCTGGTAGTCCATCAGCACAATGAAGGAGACTGG +
Preference number: 5 (lower is better)
Translates to: SAVQWRGGLSRPPTP*PCQLVVHQHNEGDW
Trigger: CCAGTCTCCTTCATTGTGCTGATGGACTACCAGCTGGCAGGGCCAGGGGGTGGGTGGGCGTGAAAGCCCTCCCCTCCACTGGACAGCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521367.5
CDS-3UTR CAA 90 bp AGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAACGGCTTTCCGCACCTTaGAGGGACGGAGTGGCGGGA +
Preference number: 5 (lower is better)
Translates to: RGLLPAATLYHMERGVGERLSAP*RDGVAG
Trigger: TCCCGCCACTCCGTCCCTCAAAGGTGCGGAAAGCCG...TTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CAA 90 bp CCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCGGCTTTCCGCACCTTaGAGGGACGGAGTGGCGGGA +
Preference number: 5 (lower is better)
Translates to: PLVLRGQGAYGAIALGAHRLSAP*RDGVAG
Trigger: TCCCGCCACTCCGTCCCTCAAAGGTGCGGAAAGCCG...GTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CAA 90 bp TGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGGTCCGGCGTGGGTGTaGTCCACTGGTCTATCCGGT +
Preference number: 5 (lower is better)
Translates to: CAKRAGGLRCYCFRGPPRGPAWV*STGLSG
Trigger: ACCGGATAGACCAGTGGACAACACCCACGCCGGACC...CCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS-3UTR CAA 90 bp GCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGACAAGTGGAGGCCTCTaGCTGCGGCTGCAATGGAGG +
Preference number: 5 (lower is better)
Translates to: AGACSQLPRSIIWSEVLGTSGGL*LRLQWR
Trigger: CCTCCATTGCAGCCGCAGCAAGAGGCCTCCACTTGT...CCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CAA 90 bp TCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGCTGCCCATTTGCCTCTaGAGTGGGCAGCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SQLPRSIIWSEVLGKAGQLPICL*SGQPWA
Trigger: AGCCCAGGGCTGCCCACTCAAGAGGCAAATGGGCAG...CTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CAA 90 bp CTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCAGTGCTTGGCTGCCCATTaGCCTCTTGAGTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LRGQGAYGAIALGAHHGQCLAAH*PLEWAA
Trigger: GGCTGCCCACTCAAGAGGCAAATGGGCAGCCAAGCA...CTGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CAA 90 bp CCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGGTGCTTGGCTGCCCATTaGCCTCTTGAGTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: PSCHALSYGARCWGRRGRCLAAH*PLEWAA
Trigger: GGCTGCCCACTCAAGAGGCAAATGGGCAGCCAAGCA...CCTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CAA 90 bp GCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCACGGGCATGCTTGGCTGCCCATTaGCCTCTTGAGTGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: AKRAGGLRCYCFRGPPRACLAAH*PLEWAA
Trigger: GGCTGCCCACTCAAGAGGCAAATGGGCAGCCAAGCA...TGCCCGTGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS CCA 90 bp AGTGCTGTCCAGTGGAGGGGAGGGCTTTCACGCCCACCCACCCCCTaGCCCTGCCAGCTGGTAGTCCATCAGCACAATGAAGGAGACTCA +
Preference number: 5 (lower is better)
Translates to: SAVQWRGGLSRPPTP*PCQLVVHQHNEGDS
Trigger: TGAGTCTCCTTCATTGTGCTGATGGACTACCAGCTGGCAGGGCCAGGGGGTGGGTGGGCGTGAAAGCCCTCCCCTCCACTGGACAGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000518856.1
ENST00000520674.5
CDS-3UTR CAA 90 bp GCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCATCCGGCGCTCATCCCTaGATTCCTCCCCTCCCCCTT +
Preference number: 5 (lower is better)
Translates to: ASCAKRAGGLRCYCFRGPSGAHP*IPPLPL
Trigger: AAGGGGGAGGGGAGGAATCAAGGGATGAGCGCCGGA...TGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CAA 90 bp AGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAATCCGGCGCTCATCCCTaGATTCCTCCCCTCCCCCTT +
Preference number: 5 (lower is better)
Translates to: RGLLPAATLYHMERGVGESGAHP*IPPLPL
Trigger: AAGGGGGAGGGGAGGAATCAAGGGATGAGCGCCGGA...TTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CAA 90 bp GGCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGTTCCCCTTTCCAGCTaGTTCGCGCTTCTGTCCCTC +
Preference number: 5 (lower is better)
Translates to: GRGLLPAATLYHMERGVGVPLSS*FALLSL
Trigger: GAGGGACAGAAGCGCGAACAAGCTGGAAAGGGGAAC...CCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000297164.8
CDS-3UTR CAA 90 bp GGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCACAAGTGGAGGCCTCTaGCTGCGGCTGCAATGGAGG +
Preference number: 5 (lower is better)
Translates to: GLLPAATLYHMERGVGEGTSGGL*LRLQWR
Trigger: CCTCCATTGCAGCCGCAGCAAGAGGCCTCCACTTGT...GCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CAA 90 bp TGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGACAAGTGGAGGCCTCTaGCTGCGGCTGCAATGGAGG +
Preference number: 5 (lower is better)
Translates to: CSQLPRSIIWSEVLGKAGTSGGL*LRLQWR
Trigger: CCTCCATTGCAGCCGCAGCAAGAGGCCTCCACTTGT...CCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CAA 90 bp CTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAACAAGTGGAGGCCTCTaGCTGCGGCTGCAATGGAGG +
Preference number: 5 (lower is better)
Translates to: LPAATLYHMERGVGEGGATSGGL*LRLQWR
Trigger: CCTCCATTGCAGCCGCAGCAAGAGGCCTCCACTTGT...TGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CAA 90 bp AGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTCTGCCCATTTGCCTCTaGAGTGGGCAGCCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: RAWASCAKRAGGLRCYCFLPICL*SGQPWA
Trigger: AGCCCAGGGCTGCCCACTCAAGAGGCAAATGGGCAG...AAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CAA 90 bp GCAGGGGCCTGCTCCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGGCCGGTACCGGTGATTaGGTTCTGGTTCCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: AGACSQLPRSIIWSEVLGAGTGD*VLVPAS
Trigger: AGAAGCCGGAACCAGAACCAAATCACCGGTACCGGC...CCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGGAGCAGGCCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518856.1
ENST00000521367.5
CDS TCA 90 bp TTTTTGGTTTCTCCCACCCTGACCACCTGGCCGACCCGGTACCGGTaGTTTGGTTCTGGTTCCGGCTTCTGCTGGGGTTCCGGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: FLVSPTLTTWPTRYR*FGSGSGFCWGSGSR
Trigger: CCTGGAGCCGGAACCCCAGCAGAAGCCGGAACCAGAACCAAATCACCGGTACCGGGTCGGCCAGGTGGTCAGGGTGGGAGAAACCAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000518025.5
ENST00000520674.5
CDS GCA 90 bp TTTTTCCTTCCTTGGAGCGTCCCTGACGGACAAGTGGAGGCCTCTTaGTGCGGCTGCAATGGAGGCAAGGGGCTGCAGAGCCCAGGTGCA +
Preference number: 5 (lower is better)
Translates to: FFLPWSVPDGQVEAS*CGCNGGKGLQSPGA
Trigger: TGCACCTGGGCTCTGCAGCCCCTTGCCTCCATTGCAGCCGCAGCAAGAGGCCTCCACTTGTCCGTCAGGGACGCTCCAAGGAAGGAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000517794.1
ENST00000518025.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CAA 90 bp TCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCAGGTCCGGCGTGGGTGTaGTCCACTGGTCTATCCGGT +
Preference number: 5 (lower is better)
Translates to: SCAKRAGGLRCYCFRGPPGPAWV*STGLSG
Trigger: ACCGGATAGACCAGTGGACAACACCCACGCCGGACC...TGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000521367.5
CDS TCA 90 bp TCTCAGTACTCCCGCACCCCTCTCCCTTTTTGGTTTCTCCCACCCTaGCCACCTGGCCGACCCGGTACCGGTGATTTGGTTCTGGTTCCG +
Preference number: 5 (lower is better)
Translates to: SQYSRTPLPFWFLPP*PPGRPGTGDLVLVP
Trigger: CGGAACCAGAACCAAATCACCGGTACCGGGTCGGCCAGGTGGTCAGGGTGGGAGAAACCAAAAAGGGAGAGGGGTGCGGGAGTACTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000518025.5
ENST00000520674.5
CDS CCA 90 bp GCTTGTTCGCGCTTCTGTCCCTCCCAAGGACACTGCAGCACGAGATaGGACGGCATTCTTAGGCGGCGGGAGCAGAAATCCTGCCTGAGT +
Preference number: 5 (lower is better)
Translates to: ACSRFCPSQGHCSTR*DGILRRREQKSCLS
Trigger: ACTCAGGCAGGATTTCTGCTCCCGCCGCCTAAGAATGCCGTCCCATCTCGTGCTGCAGTGTCCTTGGGAGGGACAGAAGCGCGAACAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000518025.5
ENST00000520674.5
CDS-3UTR CAA 90 bp AGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTCCCGGTACCGGTGATTaGGTTCTGGTTCCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: RAWASCAKRAGGLRCYCFPGTGD*VLVPAS
Trigger: AGAAGCCGGAACCAGAACCAAATCACCGGTACCGGG...AAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000297164.8
CDS-3UTR CAA 90 bp TGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCACCCCTCTCCCTTTTaGGTTTCTCCCACCCTGACC +
Preference number: 5 (lower is better)
Translates to: WASCAKRAGGLRCYCFRGHPSPF*VSPTLT
Trigger: GGTCAGGGTGGGAGAAACCAAAAAGGGAGAGGGGTG...GCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000297164.8
CDS-3UTR CAA 90 bp AGGCCAGGGCCTGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTTCAGAAGTGTCTGGTTaGCTTGGCTGCCCATTTGCC +
Preference number: 5 (lower is better)
Translates to: RPGPGPLVLRGQGAYGAISEVSG*LGCPFA
Trigger: GGCAAATGGGCAGCCAAGCAAACCAGACACTTCTGA...AATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCAGGCCCTGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CAA 90 bp CCCAGCTGCCACGCTCTATCATATGGAGCGAGGTGTTGGGGAAGGCGGGGCAGGTCAGAAGTGTCTGGTTaGCTTGGCTGCCCATTTGCC +
Preference number: 5 (lower is better)
Translates to: PSCHALSYGARCWGRRGRSEVSG*LGCPFA
Trigger: GGCAAATGGGCAGCCAAGCAAACCAGACACTTCTGA...CCTGCCCCGCCTTCCCCAACACCTCGCTCCATATGATAGAGCGTGGCAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS GCA 90 bp TTCCCCTTTCCAGCTTGTTCGCGCTTCTGTCCCTCCCAAGGACACTaGAGCACGAGATGGGACGGCATTCTTAGGCGGCGGGAGCAGAAA +
Preference number: 5 (lower is better)
Translates to: FPFPACSRFCPSQGH*STRWDGILRRREQK
Trigger: TTTCTGCTCCCGCCGCCTAAGAATGCCGTCCCATCTCGTGCTGCAGTGTCCTTGGGAGGGACAGAAGCGCGAACAAGCTGGAAAGGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000518025.5
ENST00000520674.5
CDS-3UTR CAA 90 bp TCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCACCAGCCGGTACCGGTGATTaGGTTCTGGTTCCGGCTTCT +
Preference number: 5 (lower is better)
Translates to: SCAKRAGGLRCYCFRGPPAGTGD*VLVPAS
Trigger: AGAAGCCGGAACCAGAACCAAATCACCGGTACCGGC...TGGTGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CAA 90 bp TGGGCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCTCAGAAGTGTCTGGTTaGCTTGGCTGCCCATTTGCC +
Preference number: 5 (lower is better)
Translates to: WASCAKRAGGLRCYCFRGSEVSG*LGCPFA
Trigger: GGCAAATGGGCAGCCAAGCAAACCAGACACTTCTGA...GCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS-3UTR CAA 90 bp GCCTCTTGTGCTAAGAGGGCAGGGGGCCTACGGTGCTATTGCTTTAGGGGCCCATCAGAAGTGTCTGGTTaGCTTGGCTGCCCATTTGCC +
Preference number: 5 (lower is better)
Translates to: ASCAKRAGGLRCYCFRGPSEVSG*LGCPFA
Trigger: GGCAAATGGGCAGCCAAGCAAACCAGACACTTCTGA...TGGGCCCCTAAAGCAATAGCACCGTAGGCCCCCTGCCCTCTTAGCACAAGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518856.1
ENST00000521367.5
CDS CCA 90 bp AGGAAGAAGACCAGCACAAGCAGGAAGAGCATATATAGCCCATGTTaGGGCGGTTCCAGGTCAGGCTGTGGTTCCGACATGAGGCCCTGG +
Preference number: 5 (lower is better)
Translates to: RKKTSTSRKSIYSPC*GGSRSGCGSDMRPW
Trigger: CCAGGGCCTCATGTCGGAACCACAGCCTGACCTGGAACCGCCCCAACATGGGCTATATATGCTCTTCCTGCTTGTGCTGGTCTTCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000517794.1
ENST00000518025.5
ENST00000520674.5
CDS CCA 72 bp CTGAGAGCGGTGGCAGGCTCCGGGCAACTCCGGCCCTaGGTCAGGGAGATCGCCTCCGCAGCCGCCCTGGCT +
Preference number: 6 (lower is better)
Translates to: LRAVAGSGQLRP*VREIASAAALA
Trigger: AGCCAGGGCGGCTGCGGAGGCGATCTCCCTGACCCAGGGCCGGAGTTGCCCGGAGCCTGCCACCGCTCTCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000517794.1
ENST00000518025.5
ENST00000518856.1
ENST00000520674.5
ENST00000521367.5
CDS CCA 72 bp CCACGGCCTGCGCCCGGTTTGGGGCAAGCGGCTGGATaGGATGGCTCGGCTTCCCGAGGATCTGACCCCCGG +
Preference number: 6 (lower is better)
Translates to: PRPAPGLGQAAG*DGSASRGSDPR
Trigger: CCGGGGGTCAGATCCTCGGGAAGCCGAGCCATCCCATCCAGCCGCTTGCCCCAAACCGGGCGCAGGCCGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000520674.5
ENST00000521367.5
CDS CCA 72 bp GGCCCTGGGTCAGGGAGATCGCCTCCGCAGCCGCCCTaGCTTCCCAAATGCCTTCACCCGTCGCGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: GPGSGRSPPQPP*LPKCLHPSRAQ
Trigger: CTGGGCCCGCGACGGGTGAAGGCATTTGGGAAGCCAGGGCGGCTGCGGAGGCGATCTCCCTGACCCAGGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000520674.5
ENST00000521367.5
CDS CCA 72 bp GGTTCCAGGTCAGGCTGTGGTTCCGACATGAGGCCCTaGGGGGCGAGCGCGGGCCAGGGCGCCTCCTGGGTT +
Preference number: 6 (lower is better)
Translates to: GSRSGCGSDMRP*GASAGQGASWV
Trigger: AACCCAGGAGGCGCCCTGGCCCGCGCTCGCCCCCCAGGGCCTCATGTCGGAACCACAGCCTGACCTGGAACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000517794.1
ENST00000518025.5
ENST00000520674.5
CDS CCA 72 bp GTAGGGGACAGGCGGTCCGGCGTGGGTGTTGTCCACTaGTCTATCCGGTACGCCTGGCGCAGCTCCTGCCCT +
Preference number: 6 (lower is better)
Translates to: VGDRRSGVGVVH*SIRYAWRSSCP
Trigger: AGGGCAGGAGCTGCGCCAGGCGTACCGGATAGACCAGTGGACAACACCCACGCCGGACCGCCTGTCCCCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000520674.5
ENST00000521367.5
CDS TCA 72 bp AGCGGCTGGATGGGATGGCTCGGCTTCCCGAGGATCTaGCCCCCGGCCGGAGACAAATGGCCCTCGCATCCT +
Preference number: 6 (lower is better)
Translates to: SGWMGWLGFPRI*PPAGDKWPSHP
Trigger: AGGATGCGAGGGCCATTTGTCTCCGGCCGGGGGTCAGATCCTCGGGAAGCCGAGCCATCCCATCCAGCCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000520674.5
ENST00000521367.5
CDS GCA 72 bp GTCCACTGGTCTATCCGGTACGCCTGGCGCAGCTCCTaGCCTCAGATGCCCCGACCGAGCGGAGAGTCAGGA +
Preference number: 6 (lower is better)
Translates to: VHWSIRYAWRSS*PQMPRPSGESG
Trigger: TCCTGACTCTCCGCTCGGTCGGGGCATCTGAGGGCAGGAGCTGCGCCAGGCGTACCGGATAGACCAGTGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000520674.5
ENST00000521367.5
CDS CCA 72 bp GACCACCTGGCCGACCCGGTACCGGTGATTTGGTTCTaGTTCCGGCTTCTGCTGGGGTTCCGGCTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: DHLADPVPVIWF*FRLLLGFRLQG
Trigger: CCCCTGGAGCCGGAACCCCAGCAGAAGCCGGAACCAGAACCAAATCACCGGTACCGGGTCGGCCAGGTGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000518025.5
ENST00000520674.5
CDS TCA 72 bp ACGGAGTGGCGGGATCTTCGGAGCTTCCTAGAGAAGTaGCCACGGCCTGCGCCCGGTTTGGGGCAAGCGGCT +
Preference number: 6 (lower is better)
Translates to: TEWRDLRSFLEK*PRPAPGLGQAA
Trigger: AGCCGCTTGCCCCAAACCGGGCGCAGGCCGTGGTCACTTCTCTAGGAAGCTCCGAAGATCCCGCCACTCCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000520674.5
ENST00000521367.5
CDS TCA 72 bp CTCCGAGGGCTGGGGGAAGCCGGCTTTCCGCACCTTTaGGGGACGGAGTGGCGGGATCTTCGGAGCTTCCTA +
Preference number: 6 (lower is better)
Translates to: LRGLGEAGFPHL*GTEWRDLRSFL
Trigger: TAGGAAGCTCCGAAGATCCCGCCACTCCGTCCCTCAAAGGTGCGGAAAGCCGGCTTCCCCCAGCCCTCGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000520674.5
ENST00000521367.5
CDS GCA 72 bp CCCCCTACCCAACCAGGGAGCTGTCCGGGCCAGGAGTaGTGTTTCGCCTTTCGGCAAGAGGTCAGCGGCAAC +
Preference number: 6 (lower is better)
Translates to: PPTQPGSCPGQE*CFAFRQEVSGN
Trigger: GTTGCCGCTGACCTCTTGCCGAAAGGCGAAACAGCACTCCTGGCCCGGACAGCTCCCTGGTTGGGTAGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000518025.5
ENST00000520674.5
CDS GCA 72 bp GTCCCTGACGGACAAGTGGAGGCCTCTTGCTGCGGCTaGAATGGAGGCAAGGGGCTGCAGAGCCCAGGTGCA +
Preference number: 6 (lower is better)
Translates to: VPDGQVEASCCG*NGGKGLQSPGA
Trigger: TGCACCTGGGCTCTGCAGCCCCTTGCCTCCATTGCAGCCGCAGCAAGAGGCCTCCACTTGTCCGTCAGGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000517794.1
ENST00000518025.5
ENST00000518856.1
ENST00000521367.5
CDS GCA 72 bp GGCCCTCGCATCCTAGGAGCTATGCTGCCAGTTCCCTaGCCAACCCGGGACGCTCAAAGCCCCAGATACCGG +
Preference number: 6 (lower is better)
Translates to: GPRILGAMLPVP*PTRDAQSPRYR
Trigger: CCGGTATCTGGGGCTTTGAGCGTCCCGGGTTGGGCAGGGAACTGGCAGCATAGCTCCTAGGATGCGAGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000444782.5
ENST00000520674.5
CDS CCA 72 bp CGACCGAGCGGAGAGTCAGGAATCTTCTCCGAGGGCTaGGGGAAGCCGGCTTTCCGCACCTTTGAGGGACGG +
Preference number: 6 (lower is better)
Translates to: RPSGESGIFSEG*GKPAFRTFEGR
Trigger: CCGTCCCTCAAAGGTGCGGAAAGCCGGCTTCCCCCAGCCCTCGGAGAAGATTCCTGACTCTCCGCTCGGTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000520674.5
ENST00000521367.5
CDS CCA 72 bp CACCCTGACCACCTGGCCGACCCGGTACCGGTGATTTaGTTCTGGTTCCGGCTTCTGCTGGGGTTCCGGCTC +
Preference number: 6 (lower is better)
Translates to: HPDHLADPVPVI*FWFRLLLGFRL
Trigger: GAGCCGGAACCCCAGCAGAAGCCGGAACCAGAACCAAATCACCGGTACCGGGTCGGCCAGGTGGTCAGGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000518025.5
ENST00000520674.5
CDS TCA 72 bp TCTCCCACCCTGACCACCTGGCCGACCCGGTACCGGTaGTTTGGTTCTGGTTCCGGCTTCTGCTGGGGTTCC +
Preference number: 6 (lower is better)
Translates to: SPTLTTWPTRYR*FGSGSGFCWGS
Trigger: GGAACCCCAGCAGAAGCCGGAACCAGAACCAAATCACCGGTACCGGGTCGGCCAGGTGGTCAGGGTGGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000297164.8
ENST00000518025.5
ENST00000520674.5
CDS TCA 72 bp GTCCGGGGGCGGCTTTTTCCTTCCTTGGAGCGTCCCTaGCGGACAAGTGGAGGCCTCTTGCTGCGGCTGCAA +
Preference number: 6 (lower is better)
Translates to: VRGRLFPSLERP*RTSGGLLLRLQ
Trigger: TTGCAGCCGCAGCAAGAGGCCTCCACTTGTCCGTCAGGGACGCTCCAAGGAAGGAAAAAGCCGCCCCCGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000517794.1
ENST00000518025.5
ENST00000518856.1
ENST00000521367.5
CDS GCA 72 bp GGATCTTCGGAGCTTCCTAGAGAAGTGACCACGGCCTaGGCCCGGTTTGGGGCAAGCGGCTGGATGGGATGG +
Preference number: 6 (lower is better)
Translates to: GSSELPREVTTA*ARFGASGWMGW
Trigger: CCATCCCATCCAGCCGCTTGCCCCAAACCGGGCGCAGGCCGTGGTCACTTCTCTAGGAAGCTCCGAAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000520674.5
ENST00000521367.5
CDS CCA 72 bp TGTCATCGTCCTCAGCCGGTACCGGTGATTTGGTTCTaGTTCCGGCTTCTGCTGGGGTTCCGGCTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: CHRPQPVPVIWF*FRLLLGFRLQG
Trigger: CCCCTGGAGCCGGAACCCCAGCAGAAGCCGGAACCAGAACCAAATCACCGGTACCGGCTGAGGACGATGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518856.1
ENST00000521367.5
CDS CAA 90 bp CAGGAATCTTCTCCGAGGGCTGGGGGAAGCCGGCTTTCCGCACCTTaGAGGGACGGAGTGGCGGGATCTTCGGAGCTTCCTAGAGAAGTG +
Preference number: 6 (lower is better)
Translates to: QESSPRAGGSRLSAP*RDGVAGSSELPREV
Trigger: CACTTCTCTAGGAAGCTCCGAAGATCCCGCCACTCCGTCCCTCAAAGGTGCGGAAAGCCGGCTTCCCCCAGCCCTCGGAGAAGATTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000520674.5
ENST00000521367.5
CDS CAA 72 bp GGTGATCAGAAGTGTCTGGTTTGCTTGGCTGCCCATTaGCCTCTTGAGTGGGCAGCCCTGGGCTTGGGCCCC +
Preference number: 6 (lower is better)
Translates to: GDQKCLVCLAAH*PLEWAALGLGP
Trigger: GGGGCCCAAGCCCAGGGCTGCCCACTCAAGAGGCAAATGGGCAGCCAAGCAAACCAGACACTTCTGATCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000518856.1
ENST00000520674.5
ENST00000521367.5
CDS CCA 72 bp GCTTTTTCCTTCCTTGGAGCGTCCCTGACGGACAAGTaGAGGCCTCTTGCTGCGGCTGCAATGGAGGCAAGG +
Preference number: 6 (lower is better)
Translates to: AFSFLGASLTDK*RPLAAAAMEAR
Trigger: CCTTGCCTCCATTGCAGCCGCAGCAAGAGGCCTCCACTTGTCCGTCAGGGACGCTCCAAGGAAGGAAAAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000517794.1
ENST00000518025.5
ENST00000518856.1
ENST00000521367.5
CDS CCA 72 bp CATTCATGTCATCGTCCTCAGCCGGTACCGGTGATTTaGTTCTGGTTCCGGCTTCTGCTGGGGTTCCGGCTC +
Preference number: 6 (lower is better)
Translates to: HSCHRPQPVPVI*FWFRLLLGFRL
Trigger: GAGCCGGAACCCCAGCAGAAGCCGGAACCAGAACCAAATCACCGGTACCGGCTGAGGACGATGACATGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518856.1
ENST00000521367.5
CDS CAA 72 bp TCATTCATGTCATCGTCCTCAGCCGGTACCGGTGATTaGGTTCTGGTTCCGGCTTCTGCTGGGGTTCCGGCT +
Preference number: 6 (lower is better)
Translates to: SFMSSSSAGTGD*VLVPASAGVPA
Trigger: AGCCGGAACCCCAGCAGAAGCCGGAACCAGAACCAAATCACCGGTACCGGCTGAGGACGATGACATGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518856.1
ENST00000521367.5
CDS GCA 72 bp GTGGTAGAGACACCTGGTGATCAGAAGTGTCTGGTTTaGTTGGCTGCCCATTTGCCTCTTGAGTGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: VVETPGDQKCLV*LAAHLPLEWAA
Trigger: GGCTGCCCACTCAAGAGGCAAATGGGCAGCCAAGCAAACCAGACACTTCTGATCACCAGGTGTCTCTACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000518856.1
ENST00000520674.5
CDS CCA 72 bp ACCAGCACAAGCAGGAAGAGCATATATAGCCCATGTTaGGGCGGTTCCAGGTCAGGCTGTGGTTCCGACATG +
Preference number: 6 (lower is better)
Translates to: TSTSRKSIYSPC*GGSRSGCGSDM
Trigger: CATGTCGGAACCACAGCCTGACCTGGAACCGCCCCAACATGGGCTATATATGCTCTTCCTGCTTGTGCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000517794.1
ENST00000518025.5
ENST00000520674.5
CDS CAA 72 bp GTAGAGACACCTGGTGATCAGAAGTGTCTGGTTTGCTaGGCTGCCCATTTGCCTCTTGAGTGGGCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: VETPGDQKCLVC*AAHLPLEWAAL
Trigger: CAGGGCTGCCCACTCAAGAGGCAAATGGGCAGCCAAGCAAACCAGACACTTCTGATCACCAGGTGTCTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000297164.8
ENST00000444782.5
ENST00000518025.5
ENST00000518856.1
ENST00000520674.5