RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RELB (Homo sapiens)

Ensembl gene IDs: ENSG00000104856

Ensembl transcript IDs: ENST00000221452.13, ENST00000505236.1, ENST00000509229.1, ENST00000509480.5, ENST00000510184.1, ENST00000589972.1, ENST00000625761.2

Found 327 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAACGGAGCTTCTCGCCAAGGCTGAATATGTCCACTTCAGAAGCATaGGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGG +
Preference number: 1 (lower is better)
Translates to: QRSFSPRLNMSTSEA*GRAKGMGVLDILVG
Trigger: CCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCATGCTTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGCTCCGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
3UTR GCA 90 bp TGTCCTCCTCTGTTCTCAGGGAGTGGCTCCTGGCAGCCAGACCTTTaGCCCTTGAAAGGTAGTTTTCCTGCACCCCTTATCTCATGGGAT +
Preference number: 1 (lower is better)
Translates to: CPPLFSGSGSWQPDL*PLKGSFPAPLISWD
Trigger: ATCCCATGAGATAAGGGGTGCAGGAAAACTACCTTTCAAGGGGCAAAGGTCTGGCTGCCAGGAGCCACTCCCTGAGAACAGAGGAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509480.5
3UTR CAA 90 bp TCGCCCGGGCCCGGCTGTCCCCCGTCCAGGCCGAAGCCGTTCTCCTaGATGTACTCGTCGATGATCTCCAATTCATCTGTTCCGCTGCTA +
Preference number: 2 (lower is better)
Translates to: SPGPGCPPSRPKPFS*MYSSMISNSSVPLL
Trigger: TAGCAGCGGAACAGATGAATTGGAGATCATCGACGAGTACATCAAGGAGAACGGCTTCGGCCTGGACGGGGGACAGCCGGGCCCGGGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509480.5
3UTR-3UTR TCA 90 bp GGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGAGCTCCACTTCAGAAGCATaGGGAAGGGCCAAGGGGATG +
Preference number: 2 (lower is better)
Translates to: GAPTCGDRGSCNKLVHGSSTSEA*GRAKGM
Trigger: CATCCCCTTGGCCCTTCCTCATGCTTCTGAAGTGGA...GCTCCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
3UTR-3UTR CCA 90 bp GGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGAGCGCTAGACATCCTGGTTaGGATTGCACGGCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: GAPTCGDRGSCNKLVHGSARHPG*DCTAPP
Trigger: TGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGC...GCTCCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
3UTR-3UTR CCA 90 bp CCTCCTCTGTTCTCAGGGAGTGGCTCCTGGCAGCCAGACCTTTGCCCCTTGAAACACGCTCTAGGTCAGTaGCAGGGCCAACCTCAAGTC +
Preference number: 2 (lower is better)
Translates to: PPLFSGSGSWQPDLCPLKHALGQ*QGQPQV
Trigger: GACTTGAGGTTGGCCCTGCCACTGACCTAGAGCGTG...TTTCAAGGGGCAAAGGTCTGGCTGCCAGGAGCCACTCCCTGAGAACAGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509480.5
3UTR-3UTR TCA 90 bp GGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGAGCGCTTCTCGCCAAGGCTaGATATGTCCACTTCAGAAG +
Preference number: 2 (lower is better)
Translates to: GAPTCGDRGSCNKLVHGSASRQG*ICPLQK
Trigger: CTTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGC...GCTCCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
3UTR-3UTR GCA 90 bp TCATCTGTAAAATGGGCTCAAGGGGAAACCCGTGCAACGGAGCTTCTCGCCAAGCATCCTGGTTGGGATTaGACGGCTCCTCCACCTCCC +
Preference number: 2 (lower is better)
Translates to: SSVKWAQGETRATELLAKHPGWD*TAPPPP
Trigger: GGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATG...CTTGGCGAGAAGCTCCGTTGCACGGGTTTCCCCTTGAGCCCATTTTACAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
3UTR-3UTR GCA 90 bp CAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGCATCCTGGTTGGGATTaGACGGCTCCTCCACCTCCC +
Preference number: 2 (lower is better)
Translates to: QESAPSSHMYNLFRILLEHPGWD*TAPPPP
Trigger: GGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATG...CTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
3UTR-3UTR CCA 90 bp AGGGAGGGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCGCTAGACATCCTGGTTaGGATTGCACGGCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: REGQESAPSSHMYNLFRIARHPG*DCTAPP
Trigger: TGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGC...GATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCCCTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
3UTR-3UTR GCA 90 bp TCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGTCAAGGGGAAACCCGTaGAACGGAGCTTCTCGCCAA +
Preference number: 2 (lower is better)
Translates to: SAPSSHMYNLFRILLEKVSRGNP*NGASRQ
Trigger: TTGGCGAGAAGCTCCGTTGCACGGGTTTCCCCTTGA...CACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
3UTR-3UTR CCA 90 bp CCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGGGCTAGACATCCTGGTTaGGATTGCACGGCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: PICTIFSESYWRRCPHMWARHPG*DCTAPP
Trigger: TGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGC...CCACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
3UTR-3UTR CCA 90 bp AAGCCGTTCTCCTTGATGTACTCGTCGATGATCTCCAATTCATCTGTTCCGCTGTCTGTTCTCAGGGAGTaGCTCCTGGCAGCCAGACCT +
Preference number: 2 (lower is better)
Translates to: KPFSLMYSSMISNSSVPLSVLRE*LLAARP
Trigger: AGGTCTGGCTGCCAGGAGCCACTCCCTGAGAACAGA...CAGCGGAACAGATGAATTGGAGATCATCGACGAGTACATCAAGGAGAACGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509480.5
3UTR-3UTR GCA 90 bp AGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGATCAAGGGGAAACCCGTaGAACGGAGCTTCTCGCCAA +
Preference number: 2 (lower is better)
Translates to: RNLPPPPICTIFSESYWRSRGNP*NGASRQ
Trigger: TTGGCGAGAAGCTCCGTTGCACGGGTTTCCCCTTGA...TCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
3UTR-3UTR CCA 90 bp CCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCTCCTCATCTGTAAAATaGGCTCAAGGGGAAACCCGT +
Preference number: 2 (lower is better)
Translates to: PLLPYVQSFPNPTGEGAPSSSVK*AQGETR
Trigger: ACGGGTTTCCCCTTGAGCCCATTTTACAGATGAGGA...GGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
3UTR-3UTR TCA 90 bp CCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGGGCTTCTCGCCAAGGCTaGATATGTCCACTTCAGAAG +
Preference number: 2 (lower is better)
Translates to: PICTIFSESYWRRCPHMWASRQG*ICPLQK
Trigger: CTTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGC...CCACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
3UTR-3UTR CCA 90 bp GAGGCTCAAAAACTCATCTTTATTGGGAAGACTCTGAACAACCAACCTACCCCCGCTAGACATCCTGGTTaGGATTGCACGGCTCCTCCA +
Preference number: 2 (lower is better)
Translates to: EAQKLIFIGKTLNNQPTPARHPG*DCTAPP
Trigger: TGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGC...GGGGGTAGGTTGGTTGTTCAGAGTCTTCCCAATAAAGATGAGTTTTTGAGCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000625761.2
3UTR CCA 72 bp CCGCTGCTAGATCTGTCCTCCTCTGTTCTCAGGGAGTaGCTCCTGGCAGCCAGACCTTTGCCCCTTGAAAGG +
Preference number: 3 (lower is better)
Translates to: PLLDLSSSVLRE*LLAARPLPLER
Trigger: CCTTTCAAGGGGCAAAGGTCTGGCTGCCAGGAGCCACTCCCTGAGAACAGAGGAGGACAGATCTAGCAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509480.5
3UTR-3UTR CAA 90 bp CCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCACATCCTGGTTGGGATaGCACGGCTCCTCCACCTCC +
Preference number: 3 (lower is better)
Translates to: PPPPICTIFSESYWRRCPTSWLG*HGSSTS
Trigger: GGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGT...GGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
3UTR-3UTR CAA 90 bp GGGAAACCCGTGCAACGGAGCTTCTCGCCAAGGCTGAATATGTCCACTTCAGAAACATCCTGGTTGGGATaGCACGGCTCCTCCACCTCC +
Preference number: 3 (lower is better)
Translates to: GKPVQRSFSPRLNMSTSETSWLG*HGSSTS
Trigger: GGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGT...TTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGCTCCGTTGCACGGGTTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
3UTR-3UTR CAA 90 bp GGCTGTCCCCCGTCCAGGCCGAAGCCGTTCTCCTTGATGTACTCGTCGATGATCCCAGACCTTTGCCCCTaGAAAGGTAGTTTTCCTGCA +
Preference number: 3 (lower is better)
Translates to: GCPPSRPKPFSLMYSSMIPDLCP*KGSFPA
Trigger: TGCAGGAAAACTACCTTTCAAGGGGCAAAGGTCTGG...GATCATCGACGAGTACATCAAGGAGAACGGCTTCGGCCTGGACGGGGGACAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000509480.5
3UTR TCA 72 bp AGGGGAAACCCGTGCAACGGAGCTTCTCGCCAAGGCTaGATATGTCCACTTCAGAAGCATGAGGAAGGGCCA +
Preference number: 3 (lower is better)
Translates to: RGNPCNGASRQG*ICPLQKHEEGP
Trigger: TGGCCCTTCCTCATGCTTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGCTCCGTTGCACGGGTTTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
3UTR TCA 72 bp TTCTCGCCAAGGCTGAATATGTCCACTTCAGAAGCATaGGGAAGGGCCAAGGGGATGGGGGTGCTAGACATC +
Preference number: 3 (lower is better)
Translates to: FSPRLNMSTSEA*GRAKGMGVLDI
Trigger: GATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCATGCTTCTGAAGTGGACATATTCAGCCTTGGCGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR TCA 90 bp AGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCTGCCGGGGGCTGACGTaGGGCCGGAGCCGCACCCTG +
Preference number: 4 (lower is better)
Translates to: RAKGMGVLDILVGIARLLCRGLT*GRSRTL
Trigger: CAGGGTGCGGCTCCGGCCTCACGTCAGCCCCCGGCA...GAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp AGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTCCCCACCCAGTGCCGCATGGCCCGGCCAGTaGGGACGGACGGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RHPGWDCTAPPPPSPPSAAWPGQ*GRTAQR
Trigger: CCTCTGGGCCGTCCGTCCCCACTGGCCGGGCCATGC...GGCACTGGGTGGGGAGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp GAAGGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGTGCCGGGGGCTGACGTaGGGCCGGAGCCGCACCCTG +
Preference number: 4 (lower is better)
Translates to: EGAPTCGDRGSCNKLVHGCRGLT*GRSRTL
Trigger: CAGGGTGCGGCTCCGGCCTCACGTCAGCCCCCGGCA...CCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp AGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTCCCCACCCAGTGCCTCTCCCCAAGGATGCTaGCGGCCGAGCGGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: RHPGWDCTAPPPPSPPSASPQGC*RPSGPR
Trigger: GCGAGGGCCGCTCGGCCGGCAGCATCCTTGGGGAGA...GGCACTGGGTGGGGAGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGAGCGCATGGCCCGGCCAGTaGGGACGGACGGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: GAPTCGDRGSCNKLVHGSAWPGQ*GRTAQR
Trigger: CCTCTGGGCCGTCCGTCCCCACTGGCCGGGCCATGC...GCTCCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp AGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTCCCCACCCAGTGCCGCCGGAGCCGCACCCTaGAGATGCCGTCGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: RHPGWDCTAPPPPSPPSAAGAAP*RCRRCS
Trigger: ACTGCACCGACGGCATCTGCAGGGTGCGGCTCCGGC...GGCACTGGGTGGGGAGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GAAGGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGCCACAAGGCTGGCGGTaGCTCCATCCCCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: EGAPTCGDRGSCNKLVHGPQGWR*LHPRGP
Trigger: CGGGCCCCGGGGATGGAGGCACCGCCAGCCTTGTGG...CCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp AGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTCCCCACCCAGTGCCGGAGGCACGGTCTGGTaGACGATCGCGGGTCGGACG +
Preference number: 4 (lower is better)
Translates to: RHPGWDCTAPPPPSPPSAGGTVW*TIAGRT
Trigger: CGTCCGACCCGCGATCGTCCACCAGACCGTGCCTCC...GGCACTGGGTGGGGAGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp AGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTCCCCACCCAGTGCCCCAGTGCCCCTCCTCTaGCATCGCGGGGCTACGTGG +
Preference number: 4 (lower is better)
Translates to: RHPGWDCTAPPPPSPPSAPVPLL*HRGATW
Trigger: CCACGTAGCCCCGCGATGCCAGAGGAGGGGCACTGG...GGCACTGGGTGGGGAGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GGTGACCGTGCTCAGGGACGCAGCCCCGCGAGACACCAGGCGTGGCAGCCCCTCATGAACCTGTGCTCCTaGAAACGGCGAGCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: GDRAQGRSPARHQAWQPLMNLCS*KRRARV
Trigger: CACTCTCGCTCGCCGTTTCCAGGAGCACAGGTTCAT...GAGGGGCTGCCACGCCTGGTGTCTCGCGGGGCTGCGTCCCTGAGCACGGTCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR TCA 90 bp GCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACAACGGCGAGCGAGAGTaGGGAGAGGTCGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: AKGMGVLDILVGIARLLHNGERE*GEVGGP
Trigger: GGGTCCCCCGACCTCTCCTCACTCTCGCTCGCCGTT...GTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp AGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTCCCCACCCAGTGCCTGGCGGGCAGCGTCTTaGTGGCCTCGGTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: RHPGWDCTAPPPPSPPSAWRAAS*WPRCCS
Trigger: AGAGCAGCACCGAGGCCAGCAAGACGCTGCCCGCCA...GGCACTGGGTGGGGAGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACGCCGGAGCCGCACCCTaGAGATGCCGTCGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: AKGMGVLDILVGIARLLHAGAAP*RCRRCS
Trigger: ACTGCACCGACGGCATCTGCAGGGTGCGGCTCCGGC...GTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACGGAGGCACGGTCTGGTaGACGATCGCGGGTCGGACG +
Preference number: 4 (lower is better)
Translates to: AKGMGVLDILVGIARLLHGGTVW*TIAGRT
Trigger: CGTCCGACCCGCGATCGTCCACCAGACCGTGCCTCC...GTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGAGCCCGGGGCCCGGGGCCTaGTACGAGTCCAGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: GAPTCGDRGSCNKLVHGSPGPGA*YESSVS
Trigger: ACTGACACTGGACTCGTACCAGGCCCCGGGCCCCGG...GCTCCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTCCAGTGCCCCTCCTCTaGCATCGCGGGGCTACGTGG +
Preference number: 4 (lower is better)
Translates to: GMGVLDILVGIARLLHLPPVPLL*HRGATW
Trigger: CCACGTAGCCCCGCGATGCCAGAGGAGGGGCACTGG...AGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR TCA 90 bp AGCATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCAACTGTGCCGGGGGCTaGCGTGAGGCCGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: SMRKGQGDGGARHPGWDCNCAGG*REAGAA
Trigger: TGCGGCTCCGGCCTCACGTCAGCCCCCGGCACAGTT...GCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp AGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTCCCCACCCAGTGCCTGCAGACCCCATCGGTaGGCCGCTGCAGGAAGACGT +
Preference number: 4 (lower is better)
Translates to: RHPGWDCTAPPPPSPPSACRPHR*AAAGRR
Trigger: ACGTCTTCCTGCAGCGGCTCACCGATGGGGTCTGCA...GGCACTGGGTGGGGAGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CTGTTCTCAGGGAGTGGCTCCTGGCAGCCAGACCTTTGCCCCTTGAAAGGTAGTTCCGTGATGACCAGGTaGGGCTGCGGGCCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: LFSGSGSWQPDLCPLKGSSVMTR*GCGPGP
Trigger: GGGCCCGGGCCCGCAGCCGCACCTGGTCATCACGGA...ACTACCTTTCAAGGGGCAAAGGTCTGGCTGCCAGGAGCCACTCCCTGAGAACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR GCA 90 bp AGCATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCTCTCCCCAAGGATGCTaGCGGCCGAGCGGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: SMRKGQGDGGARHPGWDCSPQGC*RPSGPR
Trigger: GCGAGGGCCGCTCGGCCGGCAGCATCCTTGGGGAGA...GCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCATGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GAAGGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGTGCTCTCCCCAAGGATaGTGCCGGCCGAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: EGAPTCGDRGSCNKLVHGCSPQG*CRPSGP
Trigger: AGGGCCGCTCGGCCGGCAGCATCCTTGGGGAGAGCA...CCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGAGCGCTCCTCGCCACCGGTaGACGGCCCGCTTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: GAPTCGDRGSCNKLVHGSAPRHR*TARFPC
Trigger: ACAAGGAAAGCGGGCCGTGCACCGGTGGCGAGGAGC...GCTCCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp ATCTGTTCCGCTGCTAGATCTGTCCTCCTCTGTTCTCAGGGAGTGGCTCCTGGCGCATGGCCCGGCCAGTaGGGACGGACGGCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ICSAARSVLLCSQGVAPGAWPGQ*GRTAQR
Trigger: CCTCTGGGCCGTCCGTCCCCACTGGCCGGGCCATGC...GCCAGGAGCCACTCCCTGAGAACAGAGGAGGACAGATCTAGCAGCGGAACAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR CCA 90 bp GCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACCGGTGCACGTCGGCCTaGGAGAAGTCAGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: AKGMGVLDILVGIARLLHRCTSA*EKSARP
Trigger: AGGTCGGGCTGACTTCTCCCAGGCCGACGTGCACCG...GTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp AGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTCCCCACCCAGTGCCGGCCTGAGCCGTGGTTaGGCAGGAAGTGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RHPGWDCTAPPPPSPPSAGLSRG*AGSGPG
Trigger: TCCTGGACCACTTCCTGCCCAACCACGGCTCAGGCC...GGCACTGGGTGGGGAGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GAAGGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGCCAGTGCCCCTCCTCTaGCATCGCGGGGCTACGTGG +
Preference number: 4 (lower is better)
Translates to: EGAPTCGDRGSCNKLVHGPVPLL*HRGATW
Trigger: CCACGTAGCCCCGCGATGCCAGAGGAGGGGCACTGG...CCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR TCA 90 bp ATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGAACGGCGAGCGAGAGTaGGGAGAGGTCGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: MRKGQGDGGARHPGWDCTNGERE*GEVGGP
Trigger: GGGTCCCCCGACCTCTCCTCACTCTCGCTCGCCGTT...CGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp CCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCTGCCGGGGGCTGACGTaGGGCCGGAGCCGCACCCTG +
Preference number: 4 (lower is better)
Translates to: PLLPYVQSFPNPTGEGAPCRGLT*GRSRTL
Trigger: CAGGGTGCGGCTCCGGCCTCACGTCAGCCCCCGGCA...GGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp GGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGAGCTGCAGACCCCATCGGTaGGCCGCTGCAGGAAGACGT +
Preference number: 4 (lower is better)
Translates to: GAPTCGDRGSCNKLVHGSCRPHR*AAAGRR
Trigger: ACGTCTTCCTGCAGCGGCTCACCGATGGGGTCTGCA...GCTCCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp GGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTCGCGAGGCAGGTACGTaGAAGGCAATGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: GMGVLDILVGIARLLHLPREAGT*KAMARC
Trigger: GCAGCGAGCCATTGCCTTTCACGTACCTGCCTCGCG...AGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR TCA 90 bp GCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACCGCGAGGCAGGTACGTaGAAGGCAATGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: AKGMGVLDILVGIARLLHREAGT*KAMARC
Trigger: GCAGCGAGCCATTGCCTTTCACGTACCTGCCTCGCG...GTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp AGCATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCTGCTCTCCCCAAGGATaGTGCCGGCCGAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: SMRKGQGDGGARHPGWDCCSPQG*CRPSGP
Trigger: AGGGCCGCTCGGCCGGCAGCATCCTTGGGGAGAGCA...GCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCATGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGAGCAATCCCGGAGCTCGATaGCGGGCAGCGTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GAPTCGDRGSCNKLVHGSNPGAR*RAASCW
Trigger: CCAGCAAGACGCTGCCCGCCATCGAGCTCCGGGATT...GCTCCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GGGATACTGAGGCTGGCAGAGAGGAAGGGACACGCTCTAGGTCAGTGGCAGGGCTCAGGGAGTGGCTCCTaGCAGCCAGACCTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: GILRLAERKGHALGQWQGSGSGS*QPDLCP
Trigger: GGGGCAAAGGTCTGGCTGCCAGGAGCCACTCCCTGA...GCCCTGCCACTGACCTAGAGCGTGTCCCTTCCTCTCTGCCAGCCTCAGTATCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR TCA 90 bp ATCTGTTCCGCTGCTAGATCTGTCCTCCTCTGTTCTCAGGGAGTGGCTCCTGGCAACGGCGAGCGAGAGTaGGGAGAGGTCGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: ICSAARSVLLCSQGVAPGNGERE*GEVGGP
Trigger: GGGTCCCCCGACCTCTCCTCACTCTCGCTCGCCGTT...GCCAGGAGCCACTCCCTGAGAACAGAGGAGGACAGATCTAGCAGCGGAACAGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR TCA 90 bp ATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGTGGGGGTGGACTCGGTaGGGCCAGTCCTTCCACACC +
Preference number: 4 (lower is better)
Translates to: MRKGQGDGGARHPGWDCTWGWTR*GQSFHT
Trigger: GGTGTGGAAGGACTGGCCTCACCGAGTCCACCCCCA...CGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCTCCGTGATGACCAGGTaGGGCTGCGGGCCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: PLLPYVQSFPNPTGEGAPSVMTR*GCGPGP
Trigger: GGGCCCGGGCCCGCAGCCGCACCTGGTCATCACGGA...GGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp AGCATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCTGGCGGGCAGCGTCTTaGTGGCCTCGGTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SMRKGQGDGGARHPGWDCWRAAS*WPRCCS
Trigger: AGAGCAGCACCGAGGCCAGCAAGACGCTGCCCGCCA...GCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACTGCAGATGCCGTCGGTaGAGTCTTTCCCCACGAGGC +
Preference number: 4 (lower is better)
Translates to: AKGMGVLDILVGIARLLHCRCRR*SLSPRG
Trigger: GCCTCGTGGGGAAAGACTGCACCGACGGCATCTGCA...GTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp AGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTCCCCACCCAGTGCCCCATCGGTGAGCCGCTaGAGGAAGACGTTGACTGTC +
Preference number: 4 (lower is better)
Translates to: RHPGWDCTAPPPPSPPSAPSVSR*RKTLTV
Trigger: GACAGTCAACGTCTTCCTGCAGCGGCTCACCGATGG...GGCACTGGGTGGGGAGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTCGGGCAGGGACACGGTaGCAGAGAAGAAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GMGVLDILVGIARLLHLPRAGTR*QRRSQG
Trigger: ACCCTGACTTCTTCTCTGGCACCGTGTCCCTGCCCG...AGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCCCACAAGGCTGGCGGTaGCTCCATCCCCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: PLLPYVQSFPNPTGEGAPPQGWR*LHPRGP
Trigger: CGGGCCCCGGGGATGGAGGCACCGCCAGCCTTGTGG...GGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTTGGGGAACATGTTGCTaGCCACAAGGCTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: GMGVLDILVGIARLLHLPWGTCC*PQGWRC
Trigger: GCACCGCCAGCCTTGTGGGCAGCAACATGTTCCCCA...AGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp AGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCTGGGGAACATGTTGCTaGCCACAAGGCTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: RAKGMGVLDILVGIARLLWGTCC*PQGWRC
Trigger: GCACCGCCAGCCTTGTGGGCAGCAACATGTTCCCCA...GAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGAGCCATCCTGGTTGGGATTaGACGGCTCCTCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: GAPTCGDRGSCNKLVHGSHPGWD*TAPPPP
Trigger: GGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATG...GCTCCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp ACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGAGCCATGTCCCTGGAGGCACGGTCTGGTaGACGATCGCGGGTCGGACG +
Preference number: 4 (lower is better)
Translates to: TCGDRGSCNKLVHGSHVPGGTVW*TIAGRT
Trigger: CGTCCGACCCGCGATCGTCCACCAGACCGTGCCTCC...AGGGACATGGCTCCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp AGCATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCCGGTGCACGTCGGCCTaGGAGAAGTCAGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: SMRKGQGDGGARHPGWDCRCTSA*EKSARP
Trigger: AGGTCGGGCTGACTTCTCCCAGGCCGACGTGCACCG...GCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCATGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp GCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACCCCAGGAGGCCCTGCTaGACACCACTGATATGTCCT +
Preference number: 4 (lower is better)
Translates to: AKGMGVLDILVGIARLLHPRRPC*TPLICP
Trigger: AGGACATATCAGTGGTGTTCAGCAGGGCCTCCTGGG...GTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp AGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCGTAGGGCGGCGTCTTaGACACAATGGCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: RAKGMGVLDILVGIARLLRRAAS*TQWQSG
Trigger: GCCAGATTGCCATTGTGTTCAAGACGCCGCCCTACG...GAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GAAGGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGTCTTGCTGGCCTCGGTaGTGCTCTCCCCAAGGATGC +
Preference number: 4 (lower is better)
Translates to: EGAPTCGDRGSCNKLVHGSCWPR*CSPQGC
Trigger: GCATCCTTGGGGAGAGCAGCACCGAGGCCAGCAAGA...CCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp AGCATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCCGGCGCATCTGTCCCTaGTGGTCCCGATATGAGGCC +
Preference number: 4 (lower is better)
Translates to: SMRKGQGDGGARHPGWDCRRICP*WSRYEA
Trigger: GGCCTCATATCGGGACCAGCAGGGACAGATGCGCCG...GCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTGATTGGGGAACATGTTaGTGCCCACAAGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GMGVLDILVGIARLLHLPDWGTC*CPQGWR
Trigger: CCGCCAGCCTTGTGGGCAGCAACATGTTCCCCAATC...AGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACGATTGGGGAACATGTTaGTGCCCACAAGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: AKGMGVLDILVGIARLLHDWGTC*CPQGWR
Trigger: CCGCCAGCCTTGTGGGCAGCAACATGTTCCCCAATC...GTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GAAGGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGCATCCTGGTTGGGATTaGACGGCTCCTCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: EGAPTCGDRGSCNKLVHGHPGWD*TAPPPP
Trigger: GGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATG...CCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp TCATCTGTTCCGCTGCTAGATCTGTCCTCCTCTGTTCTCAGGGAGTGGCTCCTGGGAGGCACGGTCTGGTaGACGATCGCGGGTCGGACG +
Preference number: 4 (lower is better)
Translates to: SSVPLLDLSSSVLREWLLGGTVW*TIAGRT
Trigger: CGTCCGACCCGCGATCGTCCACCAGACCGTGCCTCC...CAGGAGCCACTCCCTGAGAACAGAGGAGGACAGATCTAGCAGCGGAACAGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR CCA 90 bp GGGAAACCCGTGCAACGGAGCTTCTCGCCAAGGCTGAATATGTCCACTTCAGAACCGGGAGGCACGGTCTaGTGGACGATCGCGGGTCGG +
Preference number: 4 (lower is better)
Translates to: GKPVQRSFSPRLNMSTSEPGGTV*WTIAGR
Trigger: CCGACCCGCGATCGTCCACCAGACCGTGCCTCCCGG...TTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGCTCCGTTGCACGGGTTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACAACACAATGGCAATCTaGCGGTGCACGTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: AKGMGVLDILVGIARLLHNTMAI*RCTSAW
Trigger: CCAGGCCGACGTGCACCGCCAGATTGCCATTGTGTT...GTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGAGCGGAAGTGGTCCAGGATaGCCGGCTTTTTCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: GAPTCGDRGSCNKLVHGSGSGPG*PAFSSA
Trigger: GGCGGAAGAAAAAGCCGGCCATCCTGGACCACTTCC...GCTCCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACGGAAGTGGTCCAGGATaGCCGGCTTTTTCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: AKGMGVLDILVGIARLLHGSGPG*PAFSSA
Trigger: GGCGGAAGAAAAAGCCGGCCATCCTGGACCACTTCC...GTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp ATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGGCCTGAGCCGTGGTTaGGCAGGAAGTGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: MRKGQGDGGARHPGWDCTGLSRG*AGSGPG
Trigger: TCCTGGACCACTTCCTGCCCAACCACGGCTCAGGCC...CGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp TCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGTCCGTGATGACCAGGTaGGGCTGCGGGCCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: SAPSSHMYNLFRILLEKVSVMTR*GCGPGP
Trigger: GGGCCCGGGCCCGCAGCCGCACCTGGTCATCACGGA...CACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACTCTCCCCAAGGATGCTaGCGGCCGAGCGGCCCTCGC +
Preference number: 4 (lower is better)
Translates to: PPPICTIFSESYWRRCPHSPQGC*RPSGPR
Trigger: GCGAGGGCCGCTCGGCCGGCAGCATCCTTGGGGAGA...GTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp ATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGTGCAGATGCCGTCGGTaGAGTCTTTCCCCACGAGGC +
Preference number: 4 (lower is better)
Translates to: MRKGQGDGGARHPGWDCTCRCRR*SLSPRG
Trigger: GCCTCGTGGGGAAAGACTGCACCGACGGCATCTGCA...CGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp AGGGAGGGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCGCCGGAGCCGCACCCTaGAGATGCCGTCGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: REGQESAPSSHMYNLFRIAGAAP*RCRRCS
Trigger: ACTGCACCGACGGCATCTGCAGGGTGCGGCTCCGGC...GATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCCCTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GAAGGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGGCCGTTTGCTCTCGATaGCATGGGGGTCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: EGAPTCGDRGSCNKLVHGAVCSR*HGGQSC
Trigger: ACAGCTCTGACCCCCATGGCATCGAGAGCAAACGGC...CCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGCCACAAGGCTGGCGGTaGCTCCATCCCCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: QESAPSSHMYNLFRILLEPQGWR*LHPRGP
Trigger: CGGGCCCCGGGGATGGAGGCACCGCCAGCCTTGTGG...CTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp ATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGCATCCTGGTTGGGATTaGACGGCTCCTCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: MRKGQGDGGARHPGWDCTHPGWD*TAPPPP
Trigger: GGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATG...CGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GGCTGTCCCCCGTCCAGGCCGAAGCCGTTCTCCTTGATGTACTCGTCGATGATCTGCTGGATGAACCTGTaGTCCTGGAAACGGCGAGCG +
Preference number: 4 (lower is better)
Translates to: GCPPSRPKPFSLMYSSMICWMNL*SWKRRA
Trigger: CGCTCGCCGTTTCCAGGAGCACAGGTTCATCCAGCA...GATCATCGACGAGTACATCAAGGAGAACGGCTTCGGCCTGGACGGGGGACAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR CCA 90 bp AGCATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCCGCATCTGTCCCTGCTaGTCCCGATATGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SMRKGQGDGGARHPGWDCRICPC*SRYEAW
Trigger: CCAGGCCTCATATCGGGACCAGCAGGGACAGATGCG...GCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTTTGCTCTCGATGCCATaGGGGTCAGAGCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: GMGVLDILVGIARLLHLPLLSMP*GSELFS
Trigger: GCTGAACAGCTCTGACCCCCATGGCATCGAGAGCAA...AGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp CCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCCGGGGCCCGGGGCCTaGTACGAGTCCAGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: PPPPICTIFSESYWRRCPPGPGA*YESSVS
Trigger: ACTGACACTGGACTCGTACCAGGCCCCGGGCCCCGG...GGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTGCTAGACATCCTGGTTaGGATTGCACGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GMGVLDILVGIARLLHLPARHPG*DCTAPP
Trigger: TGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGC...AGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR TCA 90 bp CTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCAACGGCGAGCGAGAGTaGGGAGAGGTCGGGGGACCC +
Preference number: 4 (lower is better)
Translates to: LPPPPICTIFSESYWRRCNGERE*GEVGGP
Trigger: GGGTCCCCCGACCTCTCCTCACTCTCGCTCGCCGTT...GCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp AGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTCCCCACCCAGTGCCCCTGCTGAACACCACTaGTATGTCCTCTTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: RHPGWDCTAPPPPSPPSAPAEHH*YVLFLH
Trigger: GTGCAGAAAGAGGACATATCAGTGGTGTTCAGCAGG...GGCACTGGGTGGGGAGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp GAAGGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGTCCACTTCAGAAGCATaGGGAAGGGCCAAGGGGATG +
Preference number: 4 (lower is better)
Translates to: EGAPTCGDRGSCNKLVHGSTSEA*GRAKGM
Trigger: CATCCCCTTGGCCCTTCCTCATGCTTCTGAAGTGGA...CCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp AGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCTCTCCAATTCATCTGTaGTCCTGGAAACGGCGAGCG +
Preference number: 4 (lower is better)
Translates to: RAKGMGVLDILVGIARLLSPIHL*SWKRRA
Trigger: CGCTCGCCGTTTCCAGGAGCACAGATGAATTGGAGA...GAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221452.13
ENST00000625761.2
CDS-3UTR GCA 90 bp GGGAAACCCGTGCAACGGAGCTTCTCGCCAAGGCTGAATATGTCCACTTCAGAACCGCGCTGCTTGGGCTaGTCCGTGATGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: GKPVQRSFSPRLNMSTSEPRCLG*SVMTRC
Trigger: GCACCTGGTCATCACGGAGCAGCCCAAGCAGCGCGG...TTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGCTCCGTTGCACGGGTTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCCGCGCTGCTTGGGCTaGTCCGTGATGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PPPPICTIFSESYWRRCPPRCLG*SVMTRC
Trigger: GCACCTGGTCATCACGGAGCAGCCCAAGCAGCGCGG...GGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCTGCTCTCCCCAAGGATaGTGCCGGCCGAGCGGCCCT +
Preference number: 4 (lower is better)
Translates to: LPPPPICTIFSESYWRRCCSPQG*CRPSGP
Trigger: AGGGCCGCTCGGCCGGCAGCATCCTTGGGGAGAGCA...GCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp ACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGAGCCATGTCCCTTCTTGCTGGCCTCGGTaGTGCTCTCCCCAAGGATGC +
Preference number: 4 (lower is better)
Translates to: TCGDRGSCNKLVHGSHVPSCWPR*CSPQGC
Trigger: GCATCCTTGGGGAGAGCAGCACCGAGGCCAGCAAGA...AGGGACATGGCTCCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCGCTCCTCGCCACCGGTaGACGGCCCGCTTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PPPPICTIFSESYWRRCPAPRHR*TARFPC
Trigger: ACAAGGAAAGCGGGCCGTGCACCGGTGGCGAGGAGC...GGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTTTTTCTTCCGCCGTTTaGTCTCGATGCCATGGGGGT +
Preference number: 4 (lower is better)
Translates to: GMGVLDILVGIARLLHLPFSSAV*SRCHGG
Trigger: ACCCCCATGGCATCGAGAGCAAACGGCGGAAGAAAA...AGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp ATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGATTGGGGAACATGTTaGTGCCCACAAGGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: MRKGQGDGGARHPGWDCTDWGTC*CPQGWR
Trigger: CCGCCAGCCTTGTGGGCAGCAACATGTTCCCCAATC...CGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp CTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCGGGGCCCGGGGCCTaGTACGAGTCCAGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: LPPPPICTIFSESYWRRCPGPGA*YESSVS
Trigger: ACTGACACTGGACTCGTACCAGGCCCCGGGCCCCGG...GCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTCCTCGCGGTAATGATTaGGGAACATGTTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GMGVLDILVGIARLLHLPPRGND*GTCCCP
Trigger: TGGGCAGCAACATGTTCCCCAATCATTACCGCGAGG...AGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp CTGCACCCCTTATCTCATGGGATCTGTGAAGCCAGTAGGGTGCCAAGGTCCCCCTCTGTTCTCAGGGAGTaGCTCCTGGCAGCCAGACCT +
Preference number: 4 (lower is better)
Translates to: LHPLSHGICEASRVPRSPSVLRE*LLAARP
Trigger: AGGTCTGGCTGCCAGGAGCCACTCCCTGAGAACAGA...GGGGGACCTTGGCACCCTACTGGCTTCACAGATCCCATGAGATAAGGGGTGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR CCA 90 bp GGGAAACCCGTGCAACGGAGCTTCTCGCCAAGGCTGAATATGTCCACTTCAGAAGGGAGGAACGGGCCATaGTCGCGAGGCAGGTACGTG +
Preference number: 4 (lower is better)
Translates to: GKPVQRSFSPRLNMSTSEGRNGP*SRGRYV
Trigger: CACGTACCTGCCTCGCGACCATGGCCCGTTCCTCCC...TTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGCTCCGTTGCACGGGTTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589972.1
CDS-3UTR TCA 90 bp TCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGAACTGTGCCGGGGGCTaGCGTGAGGCCGGAGCCGCA +
Preference number: 4 (lower is better)
Translates to: SHMYNLFRILLEKVPPHVNCAGG*REAGAA
Trigger: TGCGGCTCCGGCCTCACGTCAGCCCCCGGCACAGTT...CACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp AGGGAGGGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCGCGAGGCAGGTACGTaGAAGGCAATGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: REGQESAPSSHMYNLFRIREAGT*KAMARC
Trigger: GCAGCGAGCCATTGCCTTTCACGTACCTGCCTCGCG...GATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCCCTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp ATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGTCCACTTCAGAAGCATaGGGAAGGGCCAAGGGGATG +
Preference number: 4 (lower is better)
Translates to: MRKGQGDGGARHPGWDCTSTSEA*GRAKGM
Trigger: CATCCCCTTGGCCCTTCCTCATGCTTCTGAAGTGGA...CGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR TCA 90 bp AGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCGCTTCTCGCCAAGGCTaGATATGTCCACTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: RAKGMGVLDILVGIARLLASRQG*ICPLQK
Trigger: CTTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGC...GAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp TCATCTGTAAAATGGGCTCAAGGGGAAACCCGTGCAACGGAGCTTCTCGCCAAGTGCTGGCCTCGGTGCTaGTCTCCCCAAGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: SSVKWAQGETRATELLAKCWPRC*SPQGCC
Trigger: GCAGCATCCTTGGGGAGAGCAGCACCGAGGCCAGCA...CTTGGCGAGAAGCTCCGTTGCACGGGTTTCCCCTTGAGCCCATTTTACAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCTGGCGGGCAGCGTCTTaGTGGCCTCGGTGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LPPPPICTIFSESYWRRCWRAAS*WPRCCS
Trigger: AGAGCAGCACCGAGGCCAGCAAGACGCTGCCCGCCA...GCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GGGAAACCCGTGCAACGGAGCTTCTCGCCAAGGCTGAATATGTCCACTTCAGAAGCCGCACCCTGCAGATaGCGTCGGTGCAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: GKPVQRSFSPRLNMSTSEAAPCR*RRCSLS
Trigger: GGAAAGACTGCACCGACGGCATCTGCAGGGTGCGGC...TTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGCTCCGTTGCACGGGTTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTCGTTGTAGGGGTCAATaGCCAGTTGAATCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: GMGVLDILVGIARLLHLPRCRGQ*PVESSA
Trigger: AGCGGAAGATTCAACTGGGCATTGACCCCTACAACG...AGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp AGGGAGGGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCGGCGCATCTGTCCCTaGTGGTCCCGATATGAGGCC +
Preference number: 4 (lower is better)
Translates to: REGQESAPSSHMYNLFRIRRICP*WSRYEA
Trigger: GGCCTCATATCGGGACCAGCAGGGACAGATGCGCCG...GATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCCCTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCGGCGCATCTGTCCCTaGTGGTCCCGATATGAGGCC +
Preference number: 4 (lower is better)
Translates to: PPPPICTIFSESYWRRCPRRICP*WSRYEA
Trigger: GGCCTCATATCGGGACCAGCAGGGACAGATGCGCCG...GGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GAGGCTCAAAAACTCATCTTTATTGGGAAGACTCTGAACAACCAACCTACCCCCCCACAAGGCTGGCGGTaGCTCCATCCCCGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: EAQKLIFIGKTLNNQPTPPQGWR*LHPRGP
Trigger: CGGGCCCCGGGGATGGAGGCACCGCCAGCCTTGTGG...GGGGGTAGGTTGGTTGTTCAGAGTCTTCCCAATAAAGATGAGTTTTTGAGCCTC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000625761.2
CDS-3UTR CCA 90 bp TCATCTGTAAAATGGGCTCAAGGGGAAACCCGTGCAACGGAGCTTCTCGCCAAGAATCCCGGAGCTCGATaGCGGGCAGCGTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSVKWAQGETRATELLAKNPGAR*RAASCW
Trigger: CCAGCAAGACGCTGCCCGCCATCGAGCTCCGGGATT...CTTGGCGAGAAGCTCCGTTGCACGGGTTTCCCCTTGAGCCCATTTTACAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp CCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCAACGGGCCTGAGCCGTaGTTGGGCAGGAAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: PLLPYVQSFPNPTGEGAPNGPEP*LGRKWS
Trigger: GGACCACTTCCTGCCCAACCACGGCTCAGGCCCGTT...GGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp TCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCAGTGCCCCTCCTCTaGCATCGCGGGGCTACGTGG +
Preference number: 4 (lower is better)
Translates to: SAPSSHMYNLFRILLEKVPVPLL*HRGATW
Trigger: CCACGTAGCCCCGCGATGCCAGAGGAGGGGCACTGG...CACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp ATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTAGACATCCTGGTTaGGATTGCACGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: MRKGQGDGGARHPGWDCTARHPG*DCTAPP
Trigger: TGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGC...CGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp ATCTGTTCCGCTGCTAGATCTGTCCTCCTCTGTTCTCAGGGAGTGGCTCCTGGCCACGCTCTAGGTCAGTaGCAGGGCCAACCTCAAGTC +
Preference number: 4 (lower is better)
Translates to: ICSAARSVLLCSQGVAPGHALGQ*QGQPQV
Trigger: GACTTGAGGTTGGCCCTGCCACTGACCTAGAGCGTG...GCCAGGAGCCACTCCCTGAGAACAGAGGAGGACAGATCTAGCAGCGGAACAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR TCA 90 bp AGCATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCGGGTCAATGCCCAGTTaGATCTTCCGCTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: SMRKGQGDGGARHPGWDCGSMPS*IFRSMA
Trigger: TGCCATTGAGCGGAAGATTCAACTGGGCATTGACCC...GCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp GCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACTTCATGTCTACTTCCTaGTGGTTCTTCAGGGACCCA +
Preference number: 4 (lower is better)
Translates to: AKGMGVLDILVGIARLLHFMSTS*WFFRDP
Trigger: TGGGTCCCTGAAGAACCATCAGGAAGTAGACATGAA...GTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp ATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGTCTCCAATTCATCTGTaGTCCTGGAAACGGCGAGCG +
Preference number: 4 (lower is better)
Translates to: MRKGQGDGGARHPGWDCTSPIHL*SWKRRA
Trigger: CGCTCGCCGTTTCCAGGAGCACAGATGAATTGGAGA...CGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221452.13
ENST00000625761.2
CDS-3UTR GCA 90 bp CAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGCCGCGCTGCTTGGGCTaGTCCGTGATGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QESAPSSHMYNLFRILLEPRCLG*SVMTRC
Trigger: GCACCTGGTCATCACGGAGCAGCCCAAGCAGCGCGG...CTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GATCTCCAATTCATCTGTTCCGCTGCTAGATCTGTCCTCCTCTGTTCTCAGGGACCGCGCTGCTTGGGCTaGTCCGTGATGACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: DLQFICSAARSVLLCSQGPRCLG*SVMTRC
Trigger: GCACCTGGTCATCACGGAGCAGCCCAAGCAGCGCGG...TCCCTGAGAACAGAGGAGGACAGATCTAGCAGCGGAACAGATGAATTGGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR GCA 90 bp CCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCTGCAGATGCCGTCGGTaGAGTCTTTCCCCACGAGGC +
Preference number: 4 (lower is better)
Translates to: PLLPYVQSFPNPTGEGAPCRCRR*SLSPRG
Trigger: GCCTCGTGGGGAAAGACTGCACCGACGGCATCTGCA...GGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACGCCGCACCCTGCAGATaGCGTCGGTGCAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PPPICTIFSESYWRRCPHAAPCR*RRCSLS
Trigger: GGAAAGACTGCACCGACGGCATCTGCAGGGTGCGGC...GTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGGGCTCCTCGCCACCGGTaGACGGCCCGCTTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PICTIFSESYWRRCPHMWAPRHR*TARFPC
Trigger: ACAAGGAAAGCGGGCCGTGCACCGGTGGCGAGGAGC...CCACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GGGAAACCCGTGCAACGGAGCTTCTCGCCAAGGCTGAATATGTCCACTTCAGAAATGGCAATCTGGCGGTaGACGTCGGCCTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GKPVQRSFSPRLNMSTSEMAIWR*TSAWEK
Trigger: CTTCTCCCAGGCCGACGTGCACCGCCAGATTGCCAT...TTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGCTCCGTTGCACGGGTTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GGGAAACCCGTGCAACGGAGCTTCTCGCCAAGGCTGAATATGTCCACTTCAGAACATCCTGGTTGGGATTaGACGGCTCCTCCACCTCCC +
Preference number: 4 (lower is better)
Translates to: GKPVQRSFSPRLNMSTSEHPGWD*TAPPPP
Trigger: GGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATG...TTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGCTCCGTTGCACGGGTTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp ACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGAGCCATGTCCCTTCAAGGGGAAACCCGTaGAACGGAGCTTCTCGCCAA +
Preference number: 4 (lower is better)
Translates to: TCGDRGSCNKLVHGSHVPSRGNP*NGASRQ
Trigger: TTGGCGAGAAGCTCCGTTGCACGGGTTTCCCCTTGA...AGGGACATGGCTCCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp AGCATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCATTCATCTGTGCTCCTaGAAACGGCGAGCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SMRKGQGDGGARHPGWDCIHLCS*KRRARV
Trigger: CACTCTCGCTCGCCGTTTCCAGGAGCACAGATGAAT...GCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000221452.13
ENST00000625761.2
CDS-3UTR CCA 90 bp GGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGAATCCCGGAGCTCGATaGCGGGCAGCGTCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GQESAPSSHMYNLFRILLNPGAR*RAASCW
Trigger: CCAGCAAGACGCTGCCCGCCATCGAGCTCCGGGATT...CAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACGAATCTTCCGCTCAATaGCAGCCTCAATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: AKGMGVLDILVGIARLLHESSAQ*QPQSPS
Trigger: AGAAGGAGATTGAGGCTGCCATTGAGCGGAAGATTC...GTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp AGCATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCTCCCGATATGAGGCCTaGAAGCAGATCCTCACCACA +
Preference number: 4 (lower is better)
Translates to: SMRKGQGDGGARHPGWDCSRYEA*KQILTT
Trigger: TGTGGTGAGGATCTGCTTCCAGGCCTCATATCGGGA...GCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp TCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCGGTGCACGTCGGCCTaGGAGAAGTCAGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: SAPSSHMYNLFRILLEKVRCTSA*EKSARP
Trigger: AGGTCGGGCTGACTTCTCCCAGGCCGACGTGCACCG...CACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp ACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGAGCCATGTCCCTTTGCTCTCGATGCCATaGGGGTCAGAGCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: TCGDRGSCNKLVHGSHVPLLSMP*GSELFS
Trigger: GCTGAACAGCTCTGACCCCCATGGCATCGAGAGCAA...AGGGACATGGCTCCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp CTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCGAGTCCAGTGTCAGTaGTTCAGGGCCGGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: LPPPPICTIFSESYWRRCRVQCQ*FRAGGL
Trigger: GAGACCCCCGGCCCTGAACCACTGACACTGGACTCG...GCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp TCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGCCGGGGCCCGGGGCCTaGTACGAGTCCAGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: SHMYNLFRILLEKVPPHVPGPGA*YESSVS
Trigger: ACTGACACTGGACTCGTACCAGGCCCCGGGCCCCGG...CACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp ATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGCCTCGCGGTAATGATTaGGGAACATGTTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: MRKGQGDGGARHPGWDCTPRGND*GTCCCP
Trigger: TGGGCAGCAACATGTTCCCCAATCATTACCGCGAGG...CGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
3UTR CAA 72 bp CCCGGCTGTCCCCCGTCCAGGCCGAAGCCGTTCTCCTaGATGTACTCGTCGATGATCTCCAATTCATCTGTT +
Preference number: 4 (lower is better)
Translates to: PGCPPSRPKPFS*MYSSMISNSSV
Trigger: AACAGATGAATTGGAGATCATCGACGAGTACATCAAGGAGAACGGCTTCGGCCTGGACGGGGGACAGCCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR TCA 90 bp AGGGAGGGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTGCTGGTCCCGATATaGGGCCTGGAAGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: REGQESAPSSHMYNLFRILLVPI*GLEADP
Trigger: AGGATCTGCTTCCAGGCCTCATATCGGGACCAGCAG...GATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCCCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp CCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCCTGCTGGTCCCGATATaGGGCCTGGAAGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: PLLPYVQSFPNPTGEGAPLLVPI*GLEADP
Trigger: AGGATCTGCTTCCAGGCCTCATATCGGGACCAGCAG...GGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp GCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACGCAAATCCGCAGCTCTaGTGTGTTTGTGGATTTCTT +
Preference number: 4 (lower is better)
Translates to: AKGMGVLDILVGIARLLHANPQL*CVCGFL
Trigger: AAGAAATCCACAAACACATCAGAGCTGCGGATTTGC...GTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp GGGAAACCCGTGCAACGGAGCTTCTCGCCAAGGCTGAATATGTCCACTTCAGAACGTAGGGCGGCGTCTTaGACACAATGGCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: GKPVQRSFSPRLNMSTSERRAAS*TQWQSG
Trigger: GCCAGATTGCCATTGTGTTCAAGACGCCGCCCTACG...TTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGCTCCGTTGCACGGGTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp CCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGGTGCAGACCCCATCGGTaGGCCGCTGCAGGAAGACGT +
Preference number: 4 (lower is better)
Translates to: PICTIFSESYWRRCPHMWCRPHR*AAAGRR
Trigger: ACGTCTTCCTGCAGCGGCTCACCGATGGGGTCTGCA...CCACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGGTGCTGGCCTCGGTGCTaGTCTCCCCAAGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: PICTIFSESYWRRCPHMWCWPRC*SPQGCC
Trigger: GCAGCATCCTTGGGGAGAGCAGCACCGAGGCCAGCA...CCACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGTGCTGGCCTCGGTGCTaGTCTCCCCAAGGATGCTGC +
Preference number: 4 (lower is better)
Translates to: QESAPSSHMYNLFRILLECWPRC*SPQGCC
Trigger: GCAGCATCCTTGGGGAGAGCAGCACCGAGGCCAGCA...CTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GAGGGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTATCTTGCTGGCCTCGGTaGTGCTCTCCCCAAGGATGC +
Preference number: 4 (lower is better)
Translates to: EGQESAPSSHMYNLFRILSCWPR*CSPQGC
Trigger: GCATCCTTGGGGAGAGCAGCACCGAGGCCAGCAAGA...TAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCATGGCAATCTGGCGGTaGACGTCGGCCTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LPPPPICTIFSESYWRRCMAIWR*TSAWEK
Trigger: CTTCTCCCAGGCCGACGTGCACCGCCAGATTGCCAT...GCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp AGGGAGGGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCCATCGGTGAGCCGCTaGAGGAAGACGTTGACTGTC +
Preference number: 4 (lower is better)
Translates to: REGQESAPSSHMYNLFRIPSVSR*RKTLTV
Trigger: GACAGTCAACGTCTTCCTGCAGCGGCTCACCGATGG...GATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCCCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GGGAAACCCGTGCAACGGAGCTTCTCGCCAAGGCTGAATATGTCCACTTCAGAACCATCGGTGAGCCGCTaGAGGAAGACGTTGACTGTC +
Preference number: 4 (lower is better)
Translates to: GKPVQRSFSPRLNMSTSEPSVSR*RKTLTV
Trigger: GACAGTCAACGTCTTCCTGCAGCGGCTCACCGATGG...TTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGCTCCGTTGCACGGGTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp AGGGAGGGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCGCCGTTTGCTCTCGATaGCATGGGGGTCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: REGQESAPSSHMYNLFRIAVCSR*HGGQSC
Trigger: ACAGCTCTGACCCCCATGGCATCGAGAGCAAACGGC...GATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCCCTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCGGGCAGGGACACGGTaGCAGAGAAGAAGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LPPPPICTIFSESYWRRCRAGTR*QRRSQG
Trigger: ACCCTGACTTCTTCTCTGGCACCGTGTCCCTGCCCG...GCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACTGGGGAACATGTTGCTaGCCACAAGGCTGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: PPPICTIFSESYWRRCPHWGTCC*PQGWRC
Trigger: GCACCGCCAGCCTTGTGGGCAGCAACATGTTCCCCA...GTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCGGAGGGCCAGGAATCTaGCCCCTCCTCCCATATGTA +
Preference number: 4 (lower is better)
Translates to: PLLPYVQSFPNPTGEGAPGGPGI*PLLPYV
Trigger: TACATATGGGAGGAGGGGGCAGATTCCTGGCCCTCC...GGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GGGAAACCCGTGCAACGGAGCTTCTCGCCAAGGCTGAATATGTCCACTTCAGAAGGAGGGCCAGGAATCTaGCCCCTCCTCCCATATGTA +
Preference number: 4 (lower is better)
Translates to: GKPVQRSFSPRLNMSTSEGGPGI*PLLPYV
Trigger: TACATATGGGAGGAGGGGGCAGATTCCTGGCCCTCC...TTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGCTCCGTTGCACGGGTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CTGCACCCCTTATCTCATGGGATCTGTGAAGCCAGTAGGGTGCCAAGGTCCCCCCTTCTTAGGCATCTGTaGTGGATGAACCTGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LHPLSHGICEASRVPRSPLLRHL*WMNLCS
Trigger: GGAGCACAGGTTCATCCAGCACAGATGCCTAAGAAG...GGGGGACCTTGGCACCCTACTGGCTTCACAGATCCCATGAGATAAGGGGTGCAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR CCA 90 bp CTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCGCATCTGTCCCTGCTaGTCCCGATATGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LPPPPICTIFSESYWRRCRICPC*SRYEAW
Trigger: CCAGGCCTCATATCGGGACCAGCAGGGACAGATGCG...GCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp TCATCTGTAAAATGGGCTCAAGGGGAAACCCGTGCAACGGAGCTTCTCGCCAAGAACACAATGGCAATCTaGCGGTGCACGTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSVKWAQGETRATELLAKNTMAI*RCTSAW
Trigger: CCAGGCCGACGTGCACCGCCAGATTGCCATTGTGTT...CTTGGCGAGAAGCTCCGTTGCACGGGTTTCCCCTTGAGCCCATTTTACAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp CAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGGGCCTGAGCCGTGGTTaGGCAGGAAGTGGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QESAPSSHMYNLFRILLEGLSRG*AGSGPG
Trigger: TCCTGGACCACTTCCTGCCCAACCACGGCTCAGGCC...CTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp CCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGGCGAGTCCAGTGTCAGTaGTTCAGGGCCGGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: PICTIFSESYWRRCPHMWRVQCQ*FRAGGL
Trigger: GAGACCCCCGGCCCTGAACCACTGACACTGGACTCG...CCACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp TCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCGAGTCCAGTGTCAGTaGTTCAGGGCCGGGGGTCTC +
Preference number: 4 (lower is better)
Translates to: SAPSSHMYNLFRILLEKVRVQCQ*FRAGGL
Trigger: GAGACCCCCGGCCCTGAACCACTGACACTGGACTCG...CACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GAAGGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGTCCTCATCTGTAAAATaGGCTCAAGGGGAAACCCGT +
Preference number: 4 (lower is better)
Translates to: EGAPTCGDRGSCNKLVHGSSSVK*AQGETR
Trigger: ACGGGTTTCCCCTTGAGCCCATTTTACAGATGAGGA...CCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp CTGTTCTCAGGGAGTGGCTCCTGGCAGCCAGACCTTTGCCCCTTGAAAGGTAGTCTTAGGCATCTGTGCTaGATGAACCTGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LFSGSGSWQPDLCPLKGSLRHLC*MNLCSW
Trigger: CCAGGAGCACAGGTTCATCCAGCACAGATGCCTAAG...ACTACCTTTCAAGGGGCAAAGGTCTGGCTGCCAGGAGCCACTCCCTGAGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR TCA 90 bp ATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGTTCATGTCTACTTCCTaGTGGTTCTTCAGGGACCCA +
Preference number: 4 (lower is better)
Translates to: MRKGQGDGGARHPGWDCTFMSTS*WFFRDP
Trigger: TGGGTCCCTGAAGAACCATCAGGAAGTAGACATGAA...CGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp CCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACCGTAGGGCGGCGTCTTaGACACAATGGCAATCTGGC +
Preference number: 4 (lower is better)
Translates to: PPPICTIFSESYWRRCPHRRAAS*TQWQSG
Trigger: GCCAGATTGCCATTGTGTTCAAGACGCCGCCCTACG...GTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp GGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGCTGCAGGAAGACGTTaGCTGTCACGGGCTCGACAA +
Preference number: 4 (lower is better)
Translates to: GQESAPSSHMYNLFRILLAAGRR*LSRARQ
Trigger: TTGTCGAGCCCGTGACAGTCAACGTCTTCCTGCAGC...CAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp AGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGACGCGAGGCAGGTACGTaGAAGGCAATGGCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: RNLPPPPICTIFSESYWRREAGT*KAMARC
Trigger: GCAGCGAGCCATTGCCTTTCACGTACCTGCCTCGCG...TCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR TCA 90 bp CCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCTCCACTTCAGAAGCATaGGGAAGGGCCAAGGGGATG +
Preference number: 4 (lower is better)
Translates to: PLLPYVQSFPNPTGEGAPSTSEA*GRAKGM
Trigger: CATCCCCTTGGCCCTTCCTCATGCTTCTGAAGTGGA...GGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp TCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGGCCGCACCCTGCAGATaGCGTCGGTGCAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: SHMYNLFRILLEKVPPHVAAPCR*RRCSLS
Trigger: GGAAAGACTGCACCGACGGCATCTGCAGGGTGCGGC...CACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GAGGGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTAGCCGTTTGCTCTCGATaGCATGGGGGTCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: EGQESAPSSHMYNLFRILAVCSR*HGGQSC
Trigger: ACAGCTCTGACCCCCATGGCATCGAGAGCAAACGGC...TAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCCCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GGGAAACCCGTGCAACGGAGCTTCTCGCCAAGGCTGAATATGTCCACTTCAGAATCAAGGGGAAACCCGTaGAACGGAGCTTCTCGCCAA +
Preference number: 4 (lower is better)
Translates to: GKPVQRSFSPRLNMSTSESRGNP*NGASRQ
Trigger: TTGGCGAGAAGCTCCGTTGCACGGGTTTCCCCTTGA...TTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGCTCCGTTGCACGGGTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCTCAAGGGGAAACCCGTaGAACGGAGCTTCTCGCCAA +
Preference number: 4 (lower is better)
Translates to: PPPPICTIFSESYWRRCPSRGNP*NGASRQ
Trigger: TTGGCGAGAAGCTCCGTTGCACGGGTTTCCCCTTGA...GGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGGAGGGCCAGGAATCTaGCCCCTCCTCCCATATGTA +
Preference number: 4 (lower is better)
Translates to: GQESAPSSHMYNLFRILLGGPGI*PLLPYV
Trigger: TACATATGGGAGGAGGGGGCAGATTCCTGGCCCTCC...CAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp AGCATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCGAATCTTCCGCTCAATaGCAGCCTCAATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SMRKGQGDGGARHPGWDCESSAQ*QPQSPS
Trigger: AGAAGGAGATTGAGGCTGCCATTGAGCGGAAGATTC...GCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp ATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGAATCTTCCGCTCAATaGCAGCCTCAATCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: MRKGQGDGGARHPGWDCTESSAQ*QPQSPS
Trigger: AGAAGGAGATTGAGGCTGCCATTGAGCGGAAGATTC...CGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACGCTCTGATGTGTTTGTaGATTTCTTGTCATAGACGG +
Preference number: 4 (lower is better)
Translates to: AKGMGVLDILVGIARLLHALMCL*ISCHRR
Trigger: CCGTCTATGACAAGAAATCCACAAACACATCAGAGC...GTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGAGCGCTCTGATGTGTTTGTaGATTTCTTGTCATAGACGG +
Preference number: 4 (lower is better)
Translates to: GAPTCGDRGSCNKLVHGSALMCL*ISCHRR
Trigger: CCGTCTATGACAAGAAATCCACAAACACATCAGAGC...GCTCCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GGGAAACCCGTGCAACGGAGCTTCTCGCCAAGGCTGAATATGTCCACTTCAGAAGTACGTGAAAGGCAATaGCTCGCTGCAGACCCCATC +
Preference number: 4 (lower is better)
Translates to: GKPVQRSFSPRLNMSTSEVRERQ*LAADPI
Trigger: GATGGGGTCTGCAGCGAGCCATTGCCTTTCACGTAC...TTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGCTCCGTTGCACGGGTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGGAAGTGGTCCAGGATaGCCGGCTTTTTCTTCCGCC +
Preference number: 4 (lower is better)
Translates to: GQESAPSSHMYNLFRILLGSGPG*PAFSSA
Trigger: GGCGGAAGAAAAAGCCGGCCATCCTGGACCACTTCC...CAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp TCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGAACGGGCCTGAGCCGTaGTTGGGCAGGAAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: SHMYNLFRILLEKVPPHVNGPEP*LGRKWS
Trigger: GGACCACTTCCTGCCCAACCACGGCTCAGGCCCGTT...CACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp CAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGCTGCTGGTCCCGATATaGGGCCTGGAAGCAGATCCT +
Preference number: 4 (lower is better)
Translates to: QESAPSSHMYNLFRILLELLVPI*GLEADP
Trigger: AGGATCTGCTTCCAGGCCTCATATCGGGACCAGCAG...CTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp TCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCAGGAGGCCCTGCTaGACACCACTGATATGTCCT +
Preference number: 4 (lower is better)
Translates to: SAPSSHMYNLFRILLEKVPRRPC*TPLICP
Trigger: AGGACATATCAGTGGTGTTCAGCAGGGCCTCCTGGG...CACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp CCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGGGCTGCAGGAAGACGTTaGCTGTCACGGGCTCGACAA +
Preference number: 4 (lower is better)
Translates to: PICTIFSESYWRRCPHMWAAGRR*LSRARQ
Trigger: TTGTCGAGCCCGTGACAGTCAACGTCTTCCTGCAGC...CCACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCTTTTCTTCCGCCGTTTaGTCTCGATGCCATGGGGGT +
Preference number: 4 (lower is better)
Translates to: PLLPYVQSFPNPTGEGAPFSSAV*SRCHGG
Trigger: ACCCCCATGGCATCGAGAGCAAACGGCGGAAGAAAA...GGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GAGGGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTATCAAGGGGAAACCCGTaGAACGGAGCTTCTCGCCAA +
Preference number: 4 (lower is better)
Translates to: EGQESAPSSHMYNLFRILSRGNP*NGASRQ
Trigger: TTGGCGAGAAGCTCCGTTGCACGGGTTTCCCCTTGA...TAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR GCA 90 bp ATCTGTTCCGCTGCTAGATCTGTCCTCCTCTGTTCTCAGGGAGTGGCTCCTGGCTGGCAGCCAGACCTTTaGCCCTTGAAAGGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: ICSAARSVLLCSQGVAPGWQPDL*PLKGSF
Trigger: AAAACTACCTTTCAAGGGGCAAAGGTCTGGCTGCCA...GCCAGGAGCCACTCCCTGAGAACAGAGGAGGACAGATCTAGCAGCGGAACAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR CCA 90 bp CCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCATTCATCTGTGCTCCTaGAAACGGCGAGCGAGAGTG +
Preference number: 4 (lower is better)
Translates to: PPPPICTIFSESYWRRCPIHLCS*KRRARV
Trigger: CACTCTCGCTCGCCGTTTCCAGGAGCACAGATGAAT...GGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221452.13
ENST00000625761.2
CDS-3UTR CCA 90 bp CCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCTCCCGATATGAGGCCTaGAAGCAGATCCTCACCACA +
Preference number: 4 (lower is better)
Translates to: PLLPYVQSFPNPTGEGAPSRYEA*KQILTT
Trigger: TGTGGTGAGGATCTGCTTCCAGGCCTCATATCGGGA...GGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp CCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGGAACACAATGGCAATCTaGCGGTGCACGTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PICTIFSESYWRRCPHMWNTMAI*RCTSAW
Trigger: CCAGGCCGACGTGCACCGCCAGATTGCCATTGTGTT...CCACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GAGGGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTATTGCTCTCGATGCCATaGGGGTCAGAGCTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: EGQESAPSSHMYNLFRILLLSMP*GSELFS
Trigger: GCTGAACAGCTCTGACCCCCATGGCATCGAGAGCAA...TAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GAGGGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTAGCTAGACATCCTGGTTaGGATTGCACGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EGQESAPSSHMYNLFRILARHPG*DCTAPP
Trigger: TGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGC...TAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR TCA 90 bp GGGAAACCCGTGCAACGGAGCTTCTCGCCAAGGCTGAATATGTCCACTTCAGAACCTGCTGAACACCACTaGTATGTCCTCTTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: GKPVQRSFSPRLNMSTSEPAEHH*YVLFLH
Trigger: GTGCAGAAAGAGGACATATCAGTGGTGTTCAGCAGG...TTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGCTCCGTTGCACGGGTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp CCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCGCTTCTCGCCAAGGCTaGATATGTCCACTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: PLLPYVQSFPNPTGEGAPASRQG*ICPLQK
Trigger: CTTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGC...GGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR TCA 90 bp AGGGAGGGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCGCTTCTCGCCAAGGCTaGATATGTCCACTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: REGQESAPSSHMYNLFRIASRQG*ICPLQK
Trigger: CTTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGC...GATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCCCTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp CCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCGTTGTAGGGGTCAATaGCCAGTTGAATCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: PPPPICTIFSESYWRRCPRCRGQ*PVESSA
Trigger: AGCGGAAGATTCAACTGGGCATTGACCCCTACAACG...GGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp TCATCTGTAAAATGGGCTCAAGGGGAAACCCGTGCAACGGAGCTTCTCGCCAAGCGTTGTAGGGGTCAATaGCCAGTTGAATCTTCCGCT +
Preference number: 4 (lower is better)
Translates to: SSVKWAQGETRATELLAKRCRGQ*PVESSA
Trigger: AGCGGAAGATTCAACTGGGCATTGACCCCTACAACG...CTTGGCGAGAAGCTCCGTTGCACGGGTTTCCCCTTGAGCCCATTTTACAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp GAGGCTCAAAAACTCATCTTTATTGGGAAGACTCTGAACAACCAACCTACCCCCATGGCAATCTGGCGGTaGACGTCGGCCTGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: EAQKLIFIGKTLNNQPTPMAIWR*TSAWEK
Trigger: CTTCTCCCAGGCCGACGTGCACCGCCAGATTGCCAT...GGGGGTAGGTTGGTTGTTCAGAGTCTTCCCAATAAAGATGAGTTTTTGAGCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000625761.2
CDS-3UTR GCA 90 bp CCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACTTTTCTTCCGCCGTTTaGTCTCGATGCCATGGGGGT +
Preference number: 4 (lower is better)
Translates to: PPPICTIFSESYWRRCPHFSSAV*SRCHGG
Trigger: ACCCCCATGGCATCGAGAGCAAACGGCGGAAGAAAA...GTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp AGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAGGAGGGCCAGGAATCTaGCCCCTCCTCCCATATGTA +
Preference number: 4 (lower is better)
Translates to: RNLPPPPICTIFSESYWRGGPGI*PLLPYV
Trigger: TACATATGGGAGGAGGGGGCAGATTCCTGGCCCTCC...TCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GAGGCTCAAAAACTCATCTTTATTGGGAAGACTCTGAACAACCAACCTACCCCCCGCATCTGTCCCTGCTaGTCCCGATATGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EAQKLIFIGKTLNNQPTPRICPC*SRYEAW
Trigger: CCAGGCCTCATATCGGGACCAGCAGGGACAGATGCG...GGGGGTAGGTTGGTTGTTCAGAGTCTTCCCAATAAAGATGAGTTTTTGAGCCTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000625761.2
CDS-3UTR CCA 90 bp CAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGGTACGTGAAAGGCAATaGCTCGCTGCAGACCCCATC +
Preference number: 4 (lower is better)
Translates to: QESAPSSHMYNLFRILLEVRERQ*LAADPI
Trigger: GATGGGGTCTGCAGCGAGCCATTGCCTTTCACGTAC...CTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp CAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGGCTAGACATCCTGGTTaGGATTGCACGGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: QESAPSSHMYNLFRILLEARHPG*DCTAPP
Trigger: TGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGC...CTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GGGAAACCCGTGCAACGGAGCTTCTCGCCAAGGCTGAATATGTCCACTTCAGAATTTTCCGAATCCTACTaGAGAAGGTGCCCCCACATG +
Preference number: 4 (lower is better)
Translates to: GKPVQRSFSPRLNMSTSEFSESY*RRCPHM
Trigger: CATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAA...TTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGCTCCGTTGCACGGGTTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp AGGGAGGGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCTTTTCCGAATCCTACTaGAGAAGGTGCCCCCACATG +
Preference number: 4 (lower is better)
Translates to: REGQESAPSSHMYNLFRIFSESY*RRCPHM
Trigger: CATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAA...GATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCCCTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp TCATCTGTAAAATGGGCTCAAGGGGAAACCCGTGCAACGGAGCTTCTCGCCAAGTTTTCCGAATCCTACTaGAGAAGGTGCCCCCACATG +
Preference number: 4 (lower is better)
Translates to: SSVKWAQGETRATELLAKFSESY*RRCPHM
Trigger: CATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAA...CTTGGCGAGAAGCTCCGTTGCACGGGTTTCCCCTTGAGCCCATTTTACAGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR TCA 90 bp TCATCTGTAAAATGGGCTCAAGGGGAAACCCGTGCAACGGAGCTTCTCGCCAAGTTCATGTCTACTTCCTaGTGGTTCTTCAGGGACCCA +
Preference number: 4 (lower is better)
Translates to: SSVKWAQGETRATELLAKFMSTS*WFFRDP
Trigger: TGGGTCCCTGAAGAACCATCAGGAAGTAGACATGAA...CTTGGCGAGAAGCTCCGTTGCACGGGTTTCCCCTTGAGCCCATTTTACAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp CTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCTGCTGAACACCACTaGTATGTCCTCTTTCTGCAC +
Preference number: 4 (lower is better)
Translates to: LPPPPICTIFSESYWRRCPAEHH*YVLFLH
Trigger: GTGCAGAAAGAGGACATATCAGTGGTGTTCAGCAGG...GCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp GGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGCTTCTCGCCAAGGCTaGATATGTCCACTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: GQESAPSSHMYNLFRILLASRQG*ICPLQK
Trigger: CTTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGC...CAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR TCA 90 bp GATGTACTCGTCGATGATCTCCAATTCATCTGTTCCGCTGCTAGATCTGTCCTCGGCATCTGTGCTGGATaGACCTGTGCTCCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: DVLVDDLQFICSAARSVLGICAG*TCAPGN
Trigger: GTTTCCAGGAGCACAGGTTCATCCAGCACAGATGCC...GAGGACAGATCTAGCAGCGGAACAGATGAATTGGAGATCATCGACGAGTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR TCA 90 bp GAGGAAGGGACACGCTCTAGGTCAGTGGCAGGGCCAACCTCAAGTCACTTGAACCAACCTCAAGTCACTTaGACTGGGAAAATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: EEGTRSRSVAGPTSSHLNQPQVT*TGKILL
Trigger: AAGAAGGATTTTCCCAGTTCAAGTGACTTGAGGTTG...GTTCAAGTGACTTGAGGTTGGCCCTGCCACTGACCTAGAGCGTGTCCCTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR GCA 90 bp GGGAAACCCGTGCAACGGAGCTTCTCGCCAAGGCTGAATATGTCCACTTCAGAAGATATGTCCTCTTTCTaGACCTTGTCGCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: GKPVQRSFSPRLNMSTSEDMSSF*TLSQSK
Trigger: CTTGCTCTGCGACAAGGTGCAGAAAGAGGACATATC...TTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGCTCCGTTGCACGGGTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR GCA 90 bp TCATCTGTAAAATGGGCTCAAGGGGAAACCCGTGCAACGGAGCTTCTCGCCAAGGATATGTCCTCTTTCTaGACCTTGTCGCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: SSVKWAQGETRATELLAKDMSSF*TLSQSK
Trigger: CTTGCTCTGCGACAAGGTGCAGAAAGAGGACATATC...CTTGGCGAGAAGCTCCGTTGCACGGGTTTCCCCTTGAGCCCATTTTACAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp AGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAGTACGTGAAAGGCAATaGCTCGCTGCAGACCCCATC +
Preference number: 4 (lower is better)
Translates to: RNLPPPPICTIFSESYWRVRERQ*LAADPI
Trigger: GATGGGGTCTGCAGCGAGCCATTGCCTTTCACGTAC...TCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp TCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGGGGTCAATGCCCAGTTaGATCTTCCGCTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: SHMYNLFRILLEKVPPHVGSMPS*IFRSMA
Trigger: TGCCATTGAGCGGAAGATTCAACTGGGCATTGACCC...CACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp CCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCGCAAATCCGCAGCTCTaGTGTGTTTGTGGATTTCTT +
Preference number: 4 (lower is better)
Translates to: PLLPYVQSFPNPTGEGAPANPQL*CVCGFL
Trigger: AAGAAATCCACAAACACATCAGAGCTGCGGATTTGC...GGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR TCA 90 bp ATCTCCAATTCATCTGTTCCGCTGCTAGATCTGTCCTCCTCTGTTCTCAGGGAGCAGACCTTTGCCCCTTaGAAGGTAGTTTTCCTGCAC +
Preference number: 4 (lower is better)
Translates to: ISNSSVPLLDLSSSVLREQTFAP*KVVFLH
Trigger: GTGCAGGAAAACTACCTTTCAAGGGGCAAAGGTCTG...CTCCCTGAGAACAGAGGAGGACAGATCTAGCAGCGGAACAGATGAATTGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR GCA 90 bp CTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCGATATGTCCTCTTTCTaGACCTTGTCGCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: LPPPPICTIFSESYWRRCDMSSF*TLSQSK
Trigger: CTTGCTCTGCGACAAGGTGCAGAAAGAGGACATATC...GCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp AGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGATCCCGATATGAGGCCTaGAAGCAGATCCTCACCACA +
Preference number: 4 (lower is better)
Translates to: RNLPPPPICTIFSESYWRSRYEA*KQILTT
Trigger: TGTGGTGAGGATCTGCTTCCAGGCCTCATATCGGGA...TCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp TCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGCCTCGCGGTAATGATTaGGGAACATGTTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SHMYNLFRILLEKVPPHVPRGND*GTCCCP
Trigger: TGGGCAGCAACATGTTCCCCAATCATTACCGCGAGG...CACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp GAGGGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTATCCTCATCTGTAAAATaGGCTCAAGGGGAAACCCGT +
Preference number: 4 (lower is better)
Translates to: EGQESAPSSHMYNLFRILSSSVK*AQGETR
Trigger: ACGGGTTTCCCCTTGAGCCCATTTTACAGATGAGGA...TAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp CAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGTTTTCCGAATCCTACTaGAGAAGGTGCCCCCACATG +
Preference number: 4 (lower is better)
Translates to: QESAPSSHMYNLFRILLEFSESY*RRCPHM
Trigger: CATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAA...CTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR TCA 90 bp GAGGCTCAAAAACTCATCTTTATTGGGAAGACTCTGAACAACCAACCTACCCCCGGGTCAATGCCCAGTTaGATCTTCCGCTCAATGGCA +
Preference number: 4 (lower is better)
Translates to: EAQKLIFIGKTLNNQPTPGSMPS*IFRSMA
Trigger: TGCCATTGAGCGGAAGATTCAACTGGGCATTGACCC...GGGGGTAGGTTGGTTGTTCAGAGTCTTCCCAATAAAGATGAGTTTTTGAGCCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000625761.2
CDS-3UTR CCA 90 bp CCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCGCTCTGATGTGTTTGTaGATTTCTTGTCATAGACGG +
Preference number: 4 (lower is better)
Translates to: PPPPICTIFSESYWRRCPALMCL*ISCHRR
Trigger: CCGTCTATGACAAGAAATCCACAAACACATCAGAGC...GGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CCA 90 bp AGCATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCAAAACTCATCTTTATTaGGAAGACTCTGAACAACCA +
Preference number: 4 (lower is better)
Translates to: SMRKGQGDGGARHPGWDCKTHLY*EDSEQP
Trigger: TGGTTGTTCAGAGTCTTCCCAATAAAGATGAGTTTT...GCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221452.13
ENST00000625761.2
CDS-3UTR CCA 90 bp TCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGTCCTCATCTGTAAAATaGGCTCAAGGGGAAACCCGT +
Preference number: 4 (lower is better)
Translates to: SHMYNLFRILLEKVPPHVSSSVK*AQGETR
Trigger: ACGGGTTTCCCCTTGAGCCCATTTTACAGATGAGGA...CACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp AGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGATCCTCATCTGTAAAATaGGCTCAAGGGGAAACCCGT +
Preference number: 4 (lower is better)
Translates to: RNLPPPPICTIFSESYWRSSSVK*AQGETR
Trigger: ACGGGTTTCCCCTTGAGCCCATTTTACAGATGAGGA...TCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CCA 90 bp CCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGGAAAACTCATCTTTATTaGGAAGACTCTGAACAACCA +
Preference number: 4 (lower is better)
Translates to: PICTIFSESYWRRCPHMWKTHLY*EDSEQP
Trigger: TGGTTGTTCAGAGTCTTCCCAATAAAGATGAGTTTT...CCACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000221452.13
ENST00000625761.2
CDS GCA 90 bp AATCCCGGAGCTCGATGGCGGGCAGCGTCTTGCTGGCCTCGGTGCTaGTCTCCCCAAGGATGCTGCCGGCCGAGCGGCCCTCGCACTCGT +
Preference number: 5 (lower is better)
Translates to: NPGARWRAASCWPRC*SPQGCCRPSGPRTR
Trigger: ACGAGTGCGAGGGCCGCTCGGCCGGCAGCATCCTTGGGGAGAGCAGCACCGAGGCCAGCAAGACGCTGCCCGCCATCGAGCTCCGGGATT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS GCA 90 bp CACAATCCCGGAGCTCGATGGCGGGCAGCGTCTTGCTGGCCTCGGTaGTGCTCTCCCCAAGGATGCTGCCGGCCGAGCGGCCCTCGCACT +
Preference number: 5 (lower is better)
Translates to: HNPGARWRAASCWPR*CSPQGCCRPSGPRT
Trigger: AGTGCGAGGGCCGCTCGGCCGGCAGCATCCTTGGGGAGAGCAGCACCGAGGCCAGCAAGACGCTGCCCGCCATCGAGCTCCGGGATTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS TCA 90 bp CCGTCGGTGCAGTCTTTCCCCACGAGGCTGTGGGGGTGGACTCGGTaGGGCCAGTCCTTCCACACCAGGCAGGCAGTCACCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: PSVQSFPTRLWGWTR*GQSFHTRQAVTSTS
Trigger: GGAGGTGGAGGTGACTGCCTGCCTGGTGTGGAAGGACTGGCCTCACCGAGTCCACCCCCACAGCCTCGTGGGGAAAGACTGCACCGACGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000510184.1
ENST00000625761.2
CDS CCA 90 bp CCGGGGATAGGAGGCCGCCCCCAAAGGCCGCCTCGCGGTAATGATTaGGGAACATGTTGCTGCCCACAAGGCTGGCGGTGCCTCCATCCC +
Preference number: 5 (lower is better)
Translates to: PGIGGRPQRPPRGND*GTCCCPQGWRCLHP
Trigger: GGGATGGAGGCACCGCCAGCCTTGTGGGCAGCAACATGTTCCCCAATCATTACCGCGAGGCGGCCTTTGGGGGCGGCCTCCTATCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CAA 90 bp GCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACATGGCGGGCAGCGTCTaGCTGGCCTCGGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: AKGMGVLDILVGIARLLHMAGSV*LASVLL
Trigger: GAGCAGCACCGAGGCCAGCAAGACGCTGCCCGCCAT...GTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp GGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTGGGCCTGAGCCGTGGTaGGGCAGGAAGTGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: GMGVLDILVGIARLLHLPGPEPW*GRKWSR
Trigger: CCTGGACCACTTCCTGCCCAACCACGGCTCAGGCCC...AGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS CCA 90 bp GGCGGCGTCTTGAACACAATGGCAATCTGGCGGTGCACGTCGGCCTaGGAGAAGTCAGCCCGACCTTCCCAGGAGGCCCTGCTGAACACC +
Preference number: 5 (lower is better)
Translates to: GGVLNTMAIWRCTSA*EKSARPSQEALLNT
Trigger: GGTGTTCAGCAGGGCCTCCTGGGAAGGTCGGGCTGACTTCTCCCAGGCCGACGTGCACCGCCAGATTGCCATTGTGTTCAAGACGCCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000509229.1
ENST00000625761.2
CDS-3UTR CAA 90 bp GAAGGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGGGGCCTGAGCCGTGGTaGGGCAGGAAGTGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: EGAPTCGDRGSCNKLVHGGPEPW*GRKWSR
Trigger: CCTGGACCACTTCCTGCCCAACCACGGCTCAGGCCC...CCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACCTTC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS CCA 90 bp GGAGGAACGGGCCTGAGCCGTGGTTGGGCAGGAAGTGGTCCAGGATaGCCGGCTTTTTCTTCCGCCGTTTGCTCTCGATGCCATGGGGGT +
Preference number: 5 (lower is better)
Translates to: GGTGLSRGWAGSGPG*PAFSSAVCSRCHGG
Trigger: ACCCCCATGGCATCGAGAGCAAACGGCGGAAGAAAAAGCCGGCCATCCTGGACCACTTCCTGCCCAACCACGGCTCAGGCCCGTTCCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000509229.1
ENST00000625761.2
CDS CCA 90 bp CACGCCGTAGCTGTCATGGTCGCGAGGCAGGTACGTGAAAGGCAATaGCTCGCTGCAGACCCCATCGGTGAGCCGCTGCAGGAAGACGTT +
Preference number: 5 (lower is better)
Translates to: HAVAVMVARQVRERQ*LAADPIGEPLQEDV
Trigger: AACGTCTTCCTGCAGCGGCTCACCGATGGGGTCTGCAGCGAGCCATTGCCTTTCACGTACCTGCCTCGCGACCATGACAGCTACGGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000509229.1
ENST00000625761.2
CDS-3UTR CAA 90 bp GGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTCGCTGCAGGAAGACGTaGACTGTCACGGGCTCGACA +
Preference number: 5 (lower is better)
Translates to: GMGVLDILVGIARLLHLPRCRKT*TVTGST
Trigger: TGTCGAGCCCGTGACAGTCAACGTCTTCCTGCAGCG...AGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS TCA 90 bp CTGTCACGGGCTCGACAATCTCCAGGTCCTCGTAGGGCGGCGTCTTaGACACAATGGCAATCTGGCGGTGCACGTCGGCCTGGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: LSRARQSPGPRRAAS*TQWQSGGARRPGRS
Trigger: ACTTCTCCCAGGCCGACGTGCACCGCCAGATTGCCATTGTGTTCAAGACGCCGCCCTACGAGGACCTGGAGATTGTCGAGCCCGTGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000509229.1
ENST00000625761.2
CDS GCA 90 bp CGGAGCTGCAGGAAGAGAAGTCCTCTTTGGGGGTCCCATCACCGATaGCTGCGTCCATCCAAACTCCTTGGGGCCTTCCTTGGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RSCRKRSPLWGSHHR*LRPSKLLGAFLGSS
Trigger: GGAGCTGCCAAGGAAGGCCCCAAGGAGTTTGGATGGACGCAGGCATCGGTGATGGGACCCCCAAAGAGGACTTCTCTTCCTGCAGCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510184.1
CDS CCA 90 bp CGCAGCCCTCCACAATCCCGGAGCTGCAGGAAGAGAAGTCCTCTTTaGGGGTCCCATCACCGATGCCTGCGTCCATCCAAACTCCTTGGG +
Preference number: 5 (lower is better)
Translates to: RSPPQSRSCRKRSPL*GSHHRCLRPSKLLG
Trigger: CCCAAGGAGTTTGGATGGACGCAGGCATCGGTGATGGGACCCCCAAAGAGGACTTCTCTTCCTGCAGCTCCGGGATTGTGGAGGGCTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510184.1
CDS GCA 90 bp TACGTGAAAGGCAATGGCTCGCTGCAGACCCCATCGGTGAGCCGCTaGAGGAAGACGTTGACTGTCACGGGCTCGACAATCTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: YVKGNGSLQTPSVSR*RKTLTVTGSTISRS
Trigger: GGACCTGGAGATTGTCGAGCCCGTGACAGTCAACGTCTTCCTGCAGCGGCTCACCGATGGGGTCTGCAGCGAGCCATTGCCTTTCACGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000509229.1
ENST00000625761.2
CDS GCA 90 bp TGGGCAGGAAGTGGTCCAGGATGGCCGGCTTTTTCTTCCGCCGTTTaGTCTCGATGCCATGGGGGTCTGAGGGAAGGCAGAGATGAGGAC +
Preference number: 5 (lower is better)
Translates to: WAGSGPGWPAFSSAV*SRCHGGLREGRDED
Trigger: GTCCTCATCTCTGCCTTCCCTCAGACCCCCATGGCATCGAGAGCAAACGGCGGAAGAAAAAGCCGGCCATCCTGGACCACTTCCTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509229.1
CDS-3UTR CAA 90 bp AGACATCCTGGTTGGGATTGCACGGCTCCTCCACCTCCCTCCCCACCCAGTGCCCCGAAGCCGTTCTCCTaGATGTACTCGTCGATGATC +
Preference number: 5 (lower is better)
Translates to: RHPGWDCTAPPPPSPPSAPKPFS*MYSSMI
Trigger: GATCATCGACGAGTACATCAAGGAGAACGGCTTCGG...GGCACTGGGTGGGGAGGGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp TCATCTGTAAAATGGGCTCAAGGGGAAACCCGTGCAACGGAGCTTCTCGCCAAGCGCATGCCGCGCTGCTaGGGCTGCTCCGTGATGACC +
Preference number: 5 (lower is better)
Translates to: SSVKWAQGETRATELLAKRMPRC*GCSVMT
Trigger: GGTCATCACGGAGCAGCCCAAGCAGCGCGGCATGCG...CTTGGCGAGAAGCTCCGTTGCACGGGTTTCCCCTTGAGCCCATTTTACAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp AGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCCACGGCCCGCTTTCCTaGTTAATTCGGCAAATCCGC +
Preference number: 5 (lower is better)
Translates to: RAKGMGVLDILVGIARLLHGPLS*LIRQIR
Trigger: GCGGATTTGCCGAATTAACAAGGAAAGCGGGCCGTG...GAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp AGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGCTCCTCTTTTTCTTCCGCCGTTaGCTCTCGATGCCATGGGGG +
Preference number: 5 (lower is better)
Translates to: RAKGMGVLDILVGIARLLFFFRR*LSMPWG
Trigger: CCCCCATGGCATCGAGAGCAAACGGCGGAAGAAAAA...GAGGAGCCGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp ATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGACATCCTGGTTGGGATaGCACGGCTCCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: MRKGQGDGGARHPGWDCTTSWLG*HGSSTS
Trigger: GGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGT...CGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS CCA 90 bp ACGGGCTCGGAAAGCACAGGATCCATCCGGCGCATCTGTCCCTGCTaGTCCCGATATGAGGCCTGGAAGCAGATCCTCACCACATTCATG +
Preference number: 5 (lower is better)
Translates to: TGSESTGSIRRICPC*SRYEAWKQILTTFM
Trigger: CATGAATGTGGTGAGGATCTGCTTCCAGGCCTCATATCGGGACCAGCAGGGACAGATGCGCCGGATGGATCCTGTGCTTTCCGAGCCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp GGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGAGCCCGAAGCCGTTCTCCTaGATGTACTCGTCGATGATC +
Preference number: 5 (lower is better)
Translates to: GAPTCGDRGSCNKLVHGSPKPFS*MYSSMI
Trigger: GATCATCGACGAGTACATCAAGGAGAACGGCTTCGG...GCTCCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp CCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGGCGGGCAGCGTCTaGCTGGCCTCGGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: PPPICTIFSESYWRRCPHMAGSV*LASVLL
Trigger: GAGCAGCACCGAGGCCAGCAAGACGCTGCCCGCCAT...GTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp GAAGGTGCCCCCACATGTGGGGACAGAGGCAGCTGTAACAAGCTAGTGCACGGGGGGGTCAATGCCCAGTaGAATCTTCCGCTCAATGGC +
Preference number: 5 (lower is better)
Translates to: EGAPTCGDRGSCNKLVHGGVNAQ*NLPLNG
Trigger: GCCATTGAGCGGAAGATTCAACTGGGCATTGACCCC...CCCGTGCACTAGCTTGTTACAGCTGCCTCTGTCCCCACATGTGGGGGCACCTTC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp CTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCGGGCCTGAGCCGTGGTaGGGCAGGAAGTGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LPPPPICTIFSESYWRRCGPEPW*GRKWSR
Trigger: CCTGGACCACTTCCTGCCCAACCACGGCTCAGGCCC...GCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp ATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCACGGGGGTCAATGCCCAGTaGAATCTTCCGCTCAATGGC +
Preference number: 5 (lower is better)
Translates to: MRKGQGDGGARHPGWDCTGVNAQ*NLPLNG
Trigger: GCCATTGAGCGGAAGATTCAACTGGGCATTGACCCC...CGTGCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp AGCATGAGGAAGGGCCAAGGGGATGGGGGTGCTAGACATCCTGGTTGGGATTGCCACGGCCCGCTTTCCTaGTTAATTCGGCAAATCCGC +
Preference number: 5 (lower is better)
Translates to: SMRKGQGDGGARHPGWDCHGPLS*LIRQIR
Trigger: GCGGATTTGCCGAATTAACAAGGAAAGCGGGCCGTG...GCAATCCCAACCAGGATGTCTAGCACCCCCATCCCCTTGGCCCTTCCTCATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp AGGGAGGGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCGCTGCAGGAAGACGTaGACTGTCACGGGCTCGACA +
Preference number: 5 (lower is better)
Translates to: REGQESAPSSHMYNLFRIRCRKT*TVTGST
Trigger: TGTCGAGCCCGTGACAGTCAACGTCTTCCTGCAGCG...GATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCCCTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS TCA 90 bp AAGCACAGGATCCATCCGGCGCATCTGTCCCTGCTGGTCCCGATATaGGGCCTGGAAGCAGATCCTCACCACATTCATGTCTACTTCCTG +
Preference number: 5 (lower is better)
Translates to: KHRIHPAHLSLLVPI*GLEADPHHIHVYFL
Trigger: CAGGAAGTAGACATGAATGTGGTGAGGATCTGCTTCCAGGCCTCATATCGGGACCAGCAGGGACAGATGCGCCGGATGGATCCTGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp CTGTTCTCAGGGAGTGGCTCCTGGCAGCCAGACCTTTGCCCCTTGAAAGGTAGTCCGAAGCCGTTCTCCTaGATGTACTCGTCGATGATC +
Preference number: 5 (lower is better)
Translates to: LFSGSGSWQPDLCPLKGSPKPFS*MYSSMI
Trigger: GATCATCGACGAGTACATCAAGGAGAACGGCTTCGG...ACTACCTTTCAAGGGGCAAAGGTCTGGCTGCCAGGAGCCACTCCCTGAGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR CAA 90 bp GAGGCTCAAAAACTCATCTTTATTGGGAAGACTCTGAACAACCAACCTACCCCCATGGCGGGCAGCGTCTaGCTGGCCTCGGTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: EAQKLIFIGKTLNNQPTPMAGSV*LASVLL
Trigger: GAGCAGCACCGAGGCCAGCAAGACGCTGCCCGCCAT...GGGGGTAGGTTGGTTGTTCAGAGTCTTCCCAATAAAGATGAGTTTTTGAGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000625761.2
CDS-3UTR CAA 90 bp GAGGGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACGCTGCAGGAAGACGTaGACTGTCACGGGCTCGACA +
Preference number: 5 (lower is better)
Translates to: EGQESAPSSHMYNLFRILRCRKT*TVTGST
Trigger: TGTCGAGCCCGTGACAGTCAACGTCTTCCTGCAGCG...TAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS CCA 90 bp ACCCAGCGTTGTAGGGGTCAATGCCCAGTTGAATCTTCCGCTCAATaGCAGCCTCAATCTCCTTCTTCCTCACACACTGGATGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: TQRCRGQCPVESSAQ*QPQSPSSSHTGCPG
Trigger: ACCTGGGCATCCAGTGTGTGAGGAAGAAGGAGATTGAGGCTGCCATTGAGCGGAAGATTCAACTGGGCATTGACCCCTACAACGCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000510184.1
ENST00000625761.2
CDS-3UTR CAA 90 bp CTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCACTGGATGCCCAGGTaGTTAAAACTGTGCCGGGGG +
Preference number: 5 (lower is better)
Translates to: LPPPPICTIFSESYWRRCHWMPR*LKLCRG
Trigger: CCCCCGGCACAGTTTTAACAACCTGGGCATCCAGTG...GCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp CCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCCACGGCCCGCTTTCCTaGTTAATTCGGCAAATCCGC +
Preference number: 5 (lower is better)
Translates to: PLLPYVQSFPNPTGEGAPHGPLS*LIRQIR
Trigger: GCGGATTTGCCGAATTAACAAGGAAAGCGGGCCGTG...GGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp GGGAAACCCGTGCAACGGAGCTTCTCGCCAAGGCTGAATATGTCCACTTCAGAATTTTTCTTCCGCCGTTaGCTCTCGATGCCATGGGGG +
Preference number: 5 (lower is better)
Translates to: GKPVQRSFSPRLNMSTSEFFFRR*LSMPWG
Trigger: CCCCCATGGCATCGAGAGCAAACGGCGGAAGAAAAA...TTCTGAAGTGGACATATTCAGCCTTGGCGAGAAGCTCCGTTGCACGGGTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp TCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGACATCCTGGTTGGGATaGCACGGCTCCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: SAPSSHMYNLFRILLEKVTSWLG*HGSSTS
Trigger: GGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGT...CACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CAA 90 bp CAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGACATCCTGGTTGGGATaGCACGGCTCCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: QESAPSSHMYNLFRILLETSWLG*HGSSTS
Trigger: GGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGT...CTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CAA 90 bp CCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGGCACTGGATGCCCAGGTaGTTAAAACTGTGCCGGGGG +
Preference number: 5 (lower is better)
Translates to: PICTIFSESYWRRCPHMWHWMPR*LKLCRG
Trigger: CCCCCGGCACAGTTTTAACAACCTGGGCATCCAGTG...CCACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp AGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAACATCCTGGTTGGGATaGCACGGCTCCTCCACCTCC +
Preference number: 5 (lower is better)
Translates to: RNLPPPPICTIFSESYWRTSWLG*HGSSTS
Trigger: GGAGGTGGAGGAGCCGTGCAATCCCAACCAGGATGT...TCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS-3UTR CAA 90 bp GGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGCCGAAGCCGTTCTCCTaGATGTACTCGTCGATGATC +
Preference number: 5 (lower is better)
Translates to: GQESAPSSHMYNLFRILLPKPFS*MYSSMI
Trigger: GATCATCGACGAGTACATCAAGGAGAACGGCTTCGG...CAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp TCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGCACTGGATGCCCAGGTaGTTAAAACTGTGCCGGGGG +
Preference number: 5 (lower is better)
Translates to: SHMYNLFRILLEKVPPHVHWMPR*LKLCRG
Trigger: CCCCCGGCACAGTTTTAACAACCTGGGCATCCAGTG...CACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp TCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGTTTTTCTTCCGCCGTTaGCTCTCGATGCCATGGGGG +
Preference number: 5 (lower is better)
Translates to: SAPSSHMYNLFRILLEKVFFFRR*LSMPWG
Trigger: CCCCCATGGCATCGAGAGCAAACGGCGGAAGAAAAA...CACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp ATCTGTTCCGCTGCTAGATCTGTCCTCCTCTGTTCTCAGGGAGTGGCTCCTGGCCCAACCTCAAGTCACTaGAACTGGGAAAATCCTTCT +
Preference number: 5 (lower is better)
Translates to: ICSAARSVLLCSQGVAPGPTSSH*NWENPS
Trigger: AGAAGGATTTTCCCAGTTCAAGTGACTTGAGGTTGG...GCCAGGAGCCACTCCCTGAGAACAGAGGAGGACAGATCTAGCAGCGGAACAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR CAA 90 bp GATCTCCAATTCATCTGTTCCGCTGCTAGATCTGTCCTCCTCTGTTCTCAGGGACCAGACCTTTGCCCCTaGAAAGGTAGTTTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: DLQFICSAARSVLLCSQGPDLCP*KGSFPA
Trigger: TGCAGGAAAACTACCTTTCAAGGGGCAAAGGTCTGG...TCCCTGAGAACAGAGGAGGACAGATCTAGCAGCGGAACAGATGAATTGGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509480.5
CDS-3UTR CAA 90 bp GGCCAGGAATCTGCCCCCTCCTCCCATATGTACAATCTTTTCCGAATCCTACTGGCAGCTCTGATGTGTTaGTGGATTTCTTGTCATAGA +
Preference number: 5 (lower is better)
Translates to: GQESAPSSHMYNLFRILLAALMC*WISCHR
Trigger: TCTATGACAAGAAATCCACAAACACATCAGAGCTGC...CAGTAGGATTCGGAAAAGATTGTACATATGGGAGGAGGGGGCAGATTCCTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp CCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGGGCAGCTCTGATGTGTTaGTGGATTTCTTGTCATAGA +
Preference number: 5 (lower is better)
Translates to: PICTIFSESYWRRCPHMWAALMC*WISCHR
Trigger: TCTATGACAAGAAATCCACAAACACATCAGAGCTGC...CCACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS-3UTR CAA 90 bp TCCCATATGTACAATCTTTTCCGAATCCTACTGGAGAAGGTGCCCCCACATGTGGCAGCTCTGATGTGTTaGTGGATTTCTTGTCATAGA +
Preference number: 5 (lower is better)
Translates to: SHMYNLFRILLEKVPPHVAALMC*WISCHR
Trigger: TCTATGACAAGAAATCCACAAACACATCAGAGCTGC...CACATGTGGGGGCACCTTCTCCAGTAGGATTCGGAAAAGATTGTACATATGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS CCA 72 bp GCGCAGCCGGCGGTCTGGCGACGCGGCGACTCGGCATaGCCCGGCCAGTGGGGACGGACGGCCCAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: AQPAVWRRGDSA*PGQWGRTAQRL
Trigger: CAGCCTCTGGGCCGTCCGTCCCCACTGGCCGGGCCATGCCGAGTCGCCGCGTCGCCAGACCGCCGGCTGCGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000509480.5
ENST00000625761.2
CDS CCA 72 bp CATGGCCCGGCCAGTGGGGACGGACGGCCCAGAGGCTaGCCCAGACCGAAGCATGCACGCGGGCCGGCCGGG +
Preference number: 6 (lower is better)
Translates to: HGPASGDGRPRG*PRPKHARGPAG
Trigger: CCCGGCCGGCCCGCGTGCATGCTTCGGTCTGGGCCAGCCTCTGGGCCGTCCGTCCCCACTGGCCGGGCCATG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000509480.5
ENST00000625761.2
CDS GCA 72 bp GCTCGATGGCGGGCAGCGTCTTGCTGGCCTCGGTGCTaGTCTCCCCAAGGATGCTGCCGGCCGAGCGGCCCT +
Preference number: 6 (lower is better)
Translates to: ARWRAASCWPRC*SPQGCCRPSGP
Trigger: AGGGCCGCTCGGCCGGCAGCATCCTTGGGGAGAGCAGCACCGAGGCCAGCAAGACGCTGCCCGCCATCGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS GCA 72 bp GGAGCTCGATGGCGGGCAGCGTCTTGCTGGCCTCGGTaGTGCTCTCCCCAAGGATGCTGCCGGCCGAGCGGC +
Preference number: 6 (lower is better)
Translates to: GARWRAASCWPR*CSPQGCCRPSG
Trigger: GCCGCTCGGCCGGCAGCATCCTTGGGGAGAGCAGCACCGAGGCCAGCAAGACGCTGCCCGCCATCGAGCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS GCA 72 bp GCGTCTTGCTGGCCTCGGTGCTGCTCTCCCCAAGGATaGTGCCGGCCGAGCGGCCCTCGCACTCGTAGCGGA +
Preference number: 6 (lower is better)
Translates to: ASCWPRCCSPQG*CRPSGPRTRSG
Trigger: TCCGCTACGAGTGCGAGGGCCGCTCGGCCGGCAGCATCCTTGGGGAGAGCAGCACCGAGGCCAGCAAGACGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS GCA 72 bp CGTGAGGCCGGAGCCGCACCCTGCAGATGCCGTCGGTaGAGTCTTTCCCCACGAGGCTGTGGGGGTGGACTC +
Preference number: 6 (lower is better)
Translates to: REAGAAPCRCRR*SLSPRGCGGGL
Trigger: GAGTCCACCCCCACAGCCTCGTGGGGAAAGACTGCACCGACGGCATCTGCAGGGTGCGGCTCCGGCCTCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000510184.1
ENST00000625761.2
CDS CCA 72 bp CCCGGCACCTCCGCTGCACACAACAGCGCTAGCGTGTaGCGGTGCCGGGGGCAGCAGGTCCAGCATGGTGAA +
Preference number: 6 (lower is better)
Translates to: PGTSAAHNSASV*RCRGQQVQHGE
Trigger: TTCACCATGCTGGACCTGCTGCCCCCGGCACCGCCACACGCTAGCGCTGTTGTGTGCAGCGGAGGTGCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS GCA 72 bp CTCCACAATCCCGGAGCTCGATGGCGGGCAGCGTCTTaGTGGCCTCGGTGCTGCTCTCCCCAAGGATGCTGC +
Preference number: 6 (lower is better)
Translates to: LHNPGARWRAAS*WPRCCSPQGCC
Trigger: GCAGCATCCTTGGGGAGAGCAGCACCGAGGCCAGCAAGACGCTGCCCGCCATCGAGCTCCGGGATTGTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS CCA 72 bp GGAGGCCGCCCCCAAAGGCCGCCTCGCGGTAATGATTaGGGAACATGTTGCTGCCCACAAGGCTGGCGGTGC +
Preference number: 6 (lower is better)
Translates to: GGRPQRPPRGND*GTCCCPQGWRC
Trigger: GCACCGCCAGCCTTGTGGGCAGCAACATGTTCCCCAATCATTACCGCGAGGCGGCCTTTGGGGGCGGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS CAA 72 bp CCTCCACAATCCCGGAGCTCGATGGCGGGCAGCGTCTaGCTGGCCTCGGTGCTGCTCTCCCCAAGGATGCTG +
Preference number: 6 (lower is better)
Translates to: PPQSRSSMAGSV*LASVLLSPRML
Trigger: CAGCATCCTTGGGGAGAGCAGCACCGAGGCCAGCAAGACGCTGCCCGCCATCGAGCTCCGGGATTGTGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS CAA 90 bp TCGCCCGGGCCCGGCTGTCCCCCGTCCAGGCCGAAGCCGTTCTCCTaGATGTACTCGTCGATGATCTCTGTGCTCCTGGAAACGGCGAGC +
Preference number: 6 (lower is better)
Translates to: SPGPGCPPSRPKPFS*MYSSMISVLLETAS
Trigger: GCTCGCCGTTTCCAGGAGCACAGAGATCATCGACGAGTACATCAAGGAGAACGGCTTCGGCCTGGACGGGGGACAGCCGGGCCCGGGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505236.1
CDS TCA 72 bp ATGCCCAGGTTGTTAAAACTGTGCCGGGGGCTGACGTaGGGCCGGAGCCGCACCCTGCAGATGCCGTCGGTG +
Preference number: 6 (lower is better)
Translates to: MPRLLKLCRGLT*GRSRTLQMPSV
Trigger: CACCGACGGCATCTGCAGGGTGCGGCTCCGGCCTCACGTCAGCCCCCGGCACAGTTTTAACAACCTGGGCAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000510184.1
ENST00000625761.2
CDS GCA 72 bp ACCTCCGCTGCACACAACAGCGCTAGCGTGTGGCGGTaGCGGGGGCAGCAGGTCCAGCATGGTGAAGAGTGT +
Preference number: 6 (lower is better)
Translates to: TSAAHNSASVWR*RGQQVQHGEEC
Trigger: ACACTCTTCACCATGCTGGACCTGCTGCCCCCGGCACCGCCACACGCTAGCGCTGTTGTGTGCAGCGGAGGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000589972.1
ENST00000625761.2
CDS CCA 72 bp GCTGTCATGGTCGCGAGGCAGGTACGTGAAAGGCAATaGCTCGCTGCAGACCCCATCGGTGAGCCGCTGCAG +
Preference number: 6 (lower is better)
Translates to: AVMVARQVRERQ*LAADPIGEPLQ
Trigger: CTGCAGCGGCTCACCGATGGGGTCTGCAGCGAGCCATTGCCTTTCACGTACCTGCCTCGCGACCATGACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000509229.1
ENST00000625761.2
CDS GCA 72 bp GGCAATGGCTCGCTGCAGACCCCATCGGTGAGCCGCTaGAGGAAGACGTTGACTGTCACGGGCTCGACAATC +
Preference number: 6 (lower is better)
Translates to: GNGSLQTPSVSR*RKTLTVTGSTI
Trigger: GATTGTCGAGCCCGTGACAGTCAACGTCTTCCTGCAGCGGCTCACCGATGGGGTCTGCAGCGAGCCATTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000509229.1
ENST00000625761.2
CDS CCA 72 bp TTGAACACAATGGCAATCTGGCGGTGCACGTCGGCCTaGGAGAAGTCAGCCCGACCTTCCCAGGAGGCCCTG +
Preference number: 6 (lower is better)
Translates to: LNTMAIWRCTSA*EKSARPSQEAL
Trigger: CAGGGCCTCCTGGGAAGGTCGGGCTGACTTCTCCCAGGCCGACGTGCACCGCCAGATTGCCATTGTGTTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000509229.1
ENST00000625761.2
CDS CCA 72 bp GGCCTGAGCCGTGGTTGGGCAGGAAGTGGTCCAGGATaGCCGGCTTTTTCTTCCGCCGTTTGCTCTCGATGC +
Preference number: 6 (lower is better)
Translates to: GLSRGWAGSGPG*PAFSSAVCSRC
Trigger: GCATCGAGAGCAAACGGCGGAAGAAAAAGCCGGCCATCCTGGACCACTTCCTGCCCAACCACGGCTCAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000509229.1
ENST00000625761.2
CDS CCA 72 bp GTCCCATCACCGATGCCTGCGTCCATCCAAACTCCTTaGGGCCTTCCTTGGCAGCTCCCCAATCCTCTCCCC +
Preference number: 6 (lower is better)
Translates to: VPSPMPASIQTP*GLPWQLPNPLP
Trigger: GGGGAGAGGATTGGGGAGCTGCCAAGGAAGGCCCCAAGGAGTTTGGATGGACGCAGGCATCGGTGATGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510184.1
CDS CAA 72 bp CTGCAGACCCCATCGGTGAGCCGCTGCAGGAAGACGTaGACTGTCACGGGCTCGACAATCTCCAGGTCCTCG +
Preference number: 6 (lower is better)
Translates to: LQTPSVSRCRKT*TVTGSTISRSS
Trigger: CGAGGACCTGGAGATTGTCGAGCCCGTGACAGTCAACGTCTTCCTGCAGCGGCTCACCGATGGGGTCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000509229.1
ENST00000625761.2
CDS CAA 72 bp GGTCCCATCACCGATGCCTGCGTCCATCCAAACTCCTaGGGGCCTTCCTTGGCAGCTCCCCAATCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: GPITDACVHPNS*GPSLAAPQSSP
Trigger: GGGAGAGGATTGGGGAGCTGCCAAGGAAGGCCCCAAGGAGTTTGGATGGACGCAGGCATCGGTGATGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510184.1
CDS CAA 90 bp TCGCCCGGGCCCGGCTGTCCCCCGTCCAGGCCGAAGCCGTTCTCCTaGATGTACTCGTCGATGATCTCCAATTCATCTGTGCTCCTGGAA +
Preference number: 6 (lower is better)
Translates to: SPGPGCPPSRPKPFS*MYSSMISNSSVLLE
Trigger: TTCCAGGAGCACAGATGAATTGGAGATCATCGACGAGTACATCAAGGAGAACGGCTTCGGCCTGGACGGGGGACAGCCGGGCCCGGGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221452.13
ENST00000625761.2
CDS CAA 90 bp CCGCAGCCCTCCACAATCCCGGAGCTGCAGGAAGAGAAGTCCTCTTaGGGGGTCCCATCACCGATGCCTGCGTCCATCCAAACTCCTTGG +
Preference number: 6 (lower is better)
Translates to: PQPSTIPELQEEKSS*GVPSPMPASIQTPW
Trigger: CCAAGGAGTTTGGATGGACGCAGGCATCGGTGATGGGACCCCCAAAGAGGACTTCTCTTCCTGCAGCTCCGGGATTGTGGAGGGCTGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510184.1
CDS TCA 72 bp GCTCGACAATCTCCAGGTCCTCGTAGGGCGGCGTCTTaGACACAATGGCAATCTGGCGGTGCACGTCGGCCT +
Preference number: 6 (lower is better)
Translates to: ARQSPGPRRAAS*TQWQSGGARRP
Trigger: AGGCCGACGTGCACCGCCAGATTGCCATTGTGTTCAAGACGCCGCCCTACGAGGACCTGGAGATTGTCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000509229.1
ENST00000625761.2
CDS TCA 72 bp AGCCCGACCTTCCCAGGAGGCCCTGCTGAACACCACTaGTATGTCCTCTGGCAGGAAACGGGGGACATCAGC +
Preference number: 6 (lower is better)
Translates to: SPTFPGGPAEHH*YVLWQETGDIS
Trigger: GCTGATGTCCCCCGTTTCCTGCCAGAGGACATATCAGTGGTGTTCAGCAGGGCCTCCTGGGAAGGTCGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509229.1
CDS CCA 72 bp GCAGGAAACGGGGGACATCAGCTAAGCCAGGACATCTaGACCACTGTGCTCCCAACTTGCCCAGCCTCCCCT +
Preference number: 6 (lower is better)
Translates to: AGNGGHQLSQDI*TTVLPTCPASP
Trigger: AGGGGAGGCTGGGCAAGTTGGGAGCACAGTGGTCCAGATGTCCTGGCTTAGCTGATGTCCCCCGTTTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509229.1
CDS CAA 72 bp CCCGGCTGTCCCCCGTCCAGGCCGAAGCCGTTCTCCTaGATGTACTCGTCGATGATCTCTGTGCTCCTGGAA +
Preference number: 6 (lower is better)
Translates to: PGCPPSRPKPFS*MYSSMISVLLE
Trigger: TTCCAGGAGCACAGAGATCATCGACGAGTACATCAAGGAGAACGGCTTCGGCCTGGACGGGGGACAGCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505236.1
CDS GCA 72 bp TCGGAAAGCACAGGATCCATCCGGCGCATCTGTCCCTaGTGGTCCCGATATGAGGCCTGGAAGCAGATCCTC +
Preference number: 6 (lower is better)
Translates to: SESTGSIRRICP*WSRYEAWKQIL
Trigger: GAGGATCTGCTTCCAGGCCTCATATCGGGACCAGCAGGGACAGATGCGCCGGATGGATCCTGTGCTTTCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS GCA 72 bp GGATGGCCGGCTTTTTCTTCCGCCGTTTGCTCTCGATaGCATGGGGGTCTGAGGGAAGGCAGAGATGAGGAC +
Preference number: 6 (lower is better)
Translates to: GWPAFSSAVCSR*HGGLREGRDED
Trigger: GTCCTCATCTCTGCCTTCCCTCAGACCCCCATGGCATCGAGAGCAAACGGCGGAAGAAAAAGCCGGCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509229.1
CDS GCA 72 bp AGTGGTCCAGGATGGCCGGCTTTTTCTTCCGCCGTTTaGTCTCGATGCCATGGGGGTCTGAGGGAAGGCAGA +
Preference number: 6 (lower is better)
Translates to: SGPGWPAFSSAV*SRCHGGLREGR
Trigger: TCTGCCTTCCCTCAGACCCCCATGGCATCGAGAGCAAACGGCGGAAGAAAAAGCCGGCCATCCTGGACCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509229.1
CDS CCA 72 bp GAAAGCACAGGATCCATCCGGCGCATCTGTCCCTGCTaGTCCCGATATGAGGCCTGGAAGCAGATCCTCACC +
Preference number: 6 (lower is better)
Translates to: ESTGSIRRICPC*SRYEAWKQILT
Trigger: GGTGAGGATCTGCTTCCAGGCCTCATATCGGGACCAGCAGGGACAGATGCGCCGGATGGATCCTGTGCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS CAA 72 bp AAGTGGTCCAGGATGGCCGGCTTTTTCTTCCGCCGTTaGCTCTCGATGCCATGGGGGTCTGAGGGAAGGCAG +
Preference number: 6 (lower is better)
Translates to: KWSRMAGFFFRR*LSMPWGSEGRQ
Trigger: CTGCCTTCCCTCAGACCCCCATGGCATCGAGAGCAAACGGCGGAAGAAAAAGCCGGCCATCCTGGACCACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000509229.1
CDS GCA 72 bp AGTGGTCCAGGATGGCCGGCTTTTTCTTCCGCCGTTTaGTCTCGATGCCATGGGGGTCAGAGCTGTTCAGCT +
Preference number: 6 (lower is better)
Translates to: SGPGWPAFSSAV*SRCHGGQSCSA
Trigger: AGCTGAACAGCTCTGACCCCCATGGCATCGAGAGCAAACGGCGGAAGAAAAAGCCGGCCATCCTGGACCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS CCA 72 bp CCACAATCCCGGAGCTGCAGGAAGAGAAGTCCTCTTTaGGGGTCCCATCACCGATGCCTGCGTCCATCCAAA +
Preference number: 6 (lower is better)
Translates to: PQSRSCRKRSPL*GSHHRCLRPSK
Trigger: TTTGGATGGACGCAGGCATCGGTGATGGGACCCCCAAAGAGGACTTCTCTTCCTGCAGCTCCGGGATTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510184.1
CDS CAA 72 bp CCCGGCTGTCCCCCGTCCAGGCCGAAGCCGTTCTCCTaGATGTACTCGTCGATGATCTCCAATTCATCTGTG +
Preference number: 6 (lower is better)
Translates to: PGCPPSRPKPFS*MYSSMISNSSV
Trigger: CACAGATGAATTGGAGATCATCGACGAGTACATCAAGGAGAACGGCTTCGGCCTGGACGGGGGACAGCCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000221452.13
ENST00000625761.2
CDS CAA 72 bp AAGTGGTCCAGGATGGCCGGCTTTTTCTTCCGCCGTTaGCTCTCGATGCCATGGGGGTCAGAGCTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: KWSRMAGFFFRR*LSMPWGSELFS
Trigger: GCTGAACAGCTCTGACCCCCATGGCATCGAGAGCAAACGGCGGAAGAAAAAGCCGGCCATCCTGGACCACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS CAA 72 bp CCAACCTTCTCCCGCGACCAGGATGATGGAATGTGTTaGCTTAAGACCACTTTGGGCCGGGCGAGGTGGCTC +
Preference number: 6 (lower is better)
Translates to: PTFSRDQDDGMC*LKTTLGRARWL
Trigger: GAGCCACCTCGCCCGGCCCAAAGTGGTCTTAAGCAAACACATTCCATCATCCTGGTCGCGGGAGAAGGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510184.1
CDS CAA 72 bp TCCACAATCCCGGAGCTGCAGGAAGAGAAGTCCTCTTaGGGGGTCCCATCACCGATGCCTGCGTCCATCCAA +
Preference number: 6 (lower is better)
Translates to: STIPELQEEKSS*GVPSPMPASIQ
Trigger: TTGGATGGACGCAGGCATCGGTGATGGGACCCCCAAAGAGGACTTCTCTTCCTGCAGCTCCGGGATTGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510184.1
CDS TCA 72 bp ATCCATCCGGCGCATCTGTCCCTGCTGGTCCCGATATaGGGCCTGGAAGCAGATCCTCACCACATTCATGTC +
Preference number: 6 (lower is better)
Translates to: IHPAHLSLLVPI*GLEADPHHIHV
Trigger: GACATGAATGTGGTGAGGATCTGCTTCCAGGCCTCATATCGGGACCAGCAGGGACAGATGCGCCGGATGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS GCA 72 bp CAACCTTCTCCCGCGACCAGGATGATGGAATGTGTTTaGTTAAGACCACTTTGGGCCGGGCGAGGTGGCTCA +
Preference number: 6 (lower is better)
Translates to: QPSPATRMMECV*LRPLWAGRGGS
Trigger: TGAGCCACCTCGCCCGGCCCAAAGTGGTCTTAAGCAAACACATTCCATCATCCTGGTCGCGGGAGAAGGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510184.1
CDS CCA 72 bp CGGCGCATCTGTCCCTGCTGGTCCCGATATGAGGCCTaGAAGCAGATCCTCACCACATTCATGTCTACTTCC +
Preference number: 6 (lower is better)
Translates to: RRICPCWSRYEA*KQILTTFMSTS
Trigger: GGAAGTAGACATGAATGTGGTGAGGATCTGCTTCCAGGCCTCATATCGGGACCAGCAGGGACAGATGCGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2
CDS CCA 72 bp TCAATGGCAGCCTCAATCTCCTTCTTCCTCACACACTaGATGCCCAGGTTGTTAAAACTGTGCCGGGGGCTG +
Preference number: 6 (lower is better)
Translates to: SMAASISFFLTH*MPRLLKLCRGL
Trigger: CAGCCCCCGGCACAGTTTTAACAACCTGGGCATCCAGTGTGTGAGGAAGAAGGAGATTGAGGCTGCCATTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000510184.1
ENST00000625761.2
CDS CAA 72 bp CTTCAGGGACCCAGCGTTGTAGGGGTCAATGCCCAGTaGAATCTTCCGCTCAATGGCAGCCTCAATCTCCTT +
Preference number: 6 (lower is better)
Translates to: LQGPSVVGVNAQ*NLPLNGSLNLL
Trigger: AAGGAGATTGAGGCTGCCATTGAGCGGAAGATTCAACTGGGCATTGACCCCTACAACGCTGGGTCCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000510184.1
ENST00000625761.2
CDS TCA 72 bp CCCGCTTTCCTTGTTAATTCGGCAAATCCGCAGCTCTaGTGTGTTTGTGGATTTCTTGTCATAGACGGGCTC +
Preference number: 6 (lower is better)
Translates to: PAFLVNSANPQL*CVCGFLVIDGL
Trigger: GAGCCCGTCTATGACAAGAAATCCACAAACACATCAGAGCTGCGGATTTGCCGAATTAACAAGGAAAGCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000221452.13
ENST00000505236.1
ENST00000625761.2