RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for REL (Homo sapiens)

Ensembl gene IDs: ENSG00000162924

Ensembl transcript IDs: ENST00000295025.12, ENST00000394479.4, ENST00000642725.1

Found 504 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AATACCAAGTACAGACTGTCCAAGGCAAGTGCATACTTGATGCTTTaGGGAGCACTGAGGCCAAGGTGCCTGGAGCTGCATGAGGAGGTG +
Preference number: 1 (lower is better)
Translates to: NTKYRLSKASAYLML*GALRPRCLELHEEV
Trigger: CACCTCCTCATGCAGCTCCAGGCACCTTGGCCTCAGTGCTCCTCAAAGCATCAAGTATGCACTTGCCTTGGACAGTCTGTACTTGGTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR GCA 90 bp CAGTGCCTGTTAGTCCTCCTACACTTGATCCACACCACTCATTTATaGTGCTTGCCTAGCTCCACAGAGATTTGCTTTTTGAGCCCTGAA +
Preference number: 1 (lower is better)
Translates to: QCLLVLLHLIHTTHL*CLPSSTEICFLSPE
Trigger: TTCAGGGCTCAAAAAGCAAATCTCTGTGGAGCTAGGCAAGCAGCATAAATGAGTGGTGTGGATCAAGTGTAGGAGGACTAACAGGCACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR CCA 90 bp AAGACAGAGATGGCTGGGCTAAGGAATAACTGGGAAGGGAGAAAATaGAGGCTGGAGGCATTTCAGAAGTCAGGATGCAAATGCATCCAA +
Preference number: 1 (lower is better)
Translates to: KTEMAGLRNNWEGRK*RLEAFQKSGCKCIQ
Trigger: TTGGATGCATTTGCATCCTGACTTCTGAAATGCCTCCAGCCTCCATTTTCTCCCTTCCCAGTTATTCCTTAGCCCAGCCATCTCTGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR TCA 90 bp GGGAGGGGTCAAGACTCATGGGAAATAAATCTCAGGGAGGAATCTTaGCTACCACAGAAAACCCAGAGGAGTATGCAAAGAGGGAAGTAT +
Preference number: 1 (lower is better)
Translates to: GRGQDSWEINLREES*LPQKTQRSMQRGKY
Trigger: ATACTTCCCTCTTTGCATACTCCTCTGGGTTTTCTGTGGTAGTCAAGATTCCTCCCTGAGATTTATTTCCCATGAGTCTTGACCCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR TCA 90 bp GGTAAAGAAGAGAGCGAGCCAGTTTATCAGGACATTCAGGTAGCATaGAAGAAAACTGAACCTGTGGGCTCTGATAAGATCATCGGAGGG +
Preference number: 1 (lower is better)
Translates to: GKEESEPVYQDIQVA*KKTEPVGSDKIIGG
Trigger: CCCTCCGATGATCTTATCAGAGCCCACAGGTTCAGTTTTCTTTCATGCTACCTGAATGTCCTGATAAACTGGCTCGCTCTCTTCTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR GCA 90 bp TGCCTGTTAGTCCTCCTACACTTGATCCACACCACTCATTTATGCTaGTTGCCTAGCTCCACAGAGATTTGCTTTTTGAGCCCTGAATTC +
Preference number: 1 (lower is better)
Translates to: CLLVLLHLIHTTHLC*LPSSTEICFLSPEF
Trigger: GAATTCAGGGCTCAAAAAGCAAATCTCTGTGGAGCTAGGCAAGCAGCATAAATGAGTGGTGTGGATCAAGTGTAGGAGGACTAACAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR GCA 90 bp GCACTTGCAACCGGAGGCTACTTTGTCTGCCTGTCTCCATACTCATaGTGTCTTATGCTCATGTTCTTCACATCTACAATTTTGCTAGCA +
Preference number: 1 (lower is better)
Translates to: ALATGGYFVCLSPYS*CLMLMFFTSTILLA
Trigger: TGCTAGCAAAATTGTAGATGTGAAGAACATGAGCATAAGACAGCATGAGTATGGAGACAGGCAGACAAAGTAGCCTCCGGTTGCAAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR GCA 90 bp TTGTTCAAACTTCACATGGCACTTGCAACCGGAGGCTACTTTGTCTaGCTGTCTCCATACTCATGCTGTCTTATGCTCATGTTCTTCACA +
Preference number: 1 (lower is better)
Translates to: LFKLHMALATGGYFV*LSPYSCCLMLMFFT
Trigger: TGTGAAGAACATGAGCATAAGACAGCATGAGTATGGAGACAGGCAGACAAAGTAGCCTCCGGTTGCAAGTGCCATGTGAAGTTTGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR TCA 90 bp TGGGTGCTAAAAGAAGAATCAAGGATGACTTCAGGGTTTTTGGCCTaGGCAACCAGAAGTATGGCATTGCCATTTACTGAGTTGGAGAAG +
Preference number: 1 (lower is better)
Translates to: WVLKEESRMTSGFLA*ATRSMALPFTELEK
Trigger: CTTCTCCAACTCAGTAAATGGCAATGCCATACTTCTGGTTGCTCAGGCCAAAAACCCTGAAGTCATCCTTGATTCTTCTTTTAGCACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR TCA 90 bp AGGGAGTCTAGGCCTGCAACTTTTAAGGACTTTGACTGCTCTGAGTaGGATGAGAAGCCAATGAATGGTTTTGAGCAGATGAATGGTATG +
Preference number: 1 (lower is better)
Translates to: RESRPATFKDFDCSE*DEKPMNGFEQMNGM
Trigger: CATACCATTCATCTGCTCAAAACCATTCATTGGCTTCTCATCTCACTCAGAGCAGTCAAAGTCCTTAAAAGTTGCAGGCCTAGACTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR TCA 90 bp GCTGATGTATATATTCAAGGACGACCTGCTCAGGTAACAGTGGAGTaGCACCTGAAGGATGTAAGAGTGAACTATGCATTTTTCTGGGAG +
Preference number: 1 (lower is better)
Translates to: ADVYIQGRPAQVTVE*HLKDVRVNYAFFWE
Trigger: CTCCCAGAAAAATGCATAGTTCACTCTTACATCCTTCAGGTGTCACTCCACTGTTACCTGAGCAGGTCGTCCTTGAATATATACATCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR GCA 90 bp CATGTGCACATTGTGCAGGTTACTTACATATGTATACATGTGCCATaGTGGTGCACTGCACCCACTAACTCGTCATCTAGCATTAGGTAT +
Preference number: 1 (lower is better)
Translates to: HVHIVQVTYICIHVP*WCTAPTNSSSSIRY
Trigger: ATACCTAATGCTAGATGACGAGTTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAAGTAACCTGCACAATGTGCACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR CCA 90 bp GTGCACATTGTGCAGGTTACTTACATATGTATACATGTGCCATGCTaGTGCACTGCACCCACTAACTCGTCATCTAGCATTAGGTATATC +
Preference number: 1 (lower is better)
Translates to: VHIVQVTYICIHVPC*CTAPTNSSSSIRYI
Trigger: GATATACCTAATGCTAGATGACGAGTTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAAGTAACCTGCACAATGTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR CCA 90 bp TTTCCGGCTTCTCTTGTACATTTTAAAGACCTGGCAATACTAGGTTaGCACAGAAACAACAGGCTAGGGACTAAGCCCCATTTATTCAGG +
Preference number: 1 (lower is better)
Translates to: FPASLVHFKDLAILG*HRNNRLGTKPHLFR
Trigger: CCTGAATAAATGGGGCTTAGTCCCTAGCCTGTTGTTTCTGTGCCAACCTAGTATTGCCAGGTCTTTAAAATGTACAAGAGAAGCCGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR TCA 90 bp AGTTCTACATCCCTGAGGAATCGCCACACTGACTTCCACAATGGTTaGACTAGTTTACAGTCCCACCAACAGTGTAAAAGTGTTCCTATT +
Preference number: 1 (lower is better)
Translates to: SSTSLRNRHTDFHNG*TSLQSHQQCKSVPI
Trigger: AATAGGAACACTTTTACACTGTTGGTGGGACTGTAAACTAGTTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATGTAGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR TCA 90 bp AGGTTTGTCAAAGATCAGATAGTTGTAGATATGCGGCGTTATTTCTaGGGGCTCTGTTCTGTTCCAGTGATCTATATCTCTGTTTTGGTA +
Preference number: 1 (lower is better)
Translates to: RFVKDQIVVDMRRYF*GLCSVPVIYISVLV
Trigger: TACCAAAACAGAGATATAGATCACTGGAACAGAACAGAGCCCTCAGAAATAACGCCGCATATCTACAACTATCTGATCTTTGACAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp TCAAACTTCACATGGCACTTGCAACCGGAGGCTACTTTGTCTGCCTGTCTCCATCTCTGCCACCCAGGCTaGAATGCAGTGGCACCATAC +
Preference number: 2 (lower is better)
Translates to: SNFTWHLQPEATLSACLHLCHPG*NAVAPY
Trigger: GTATGGTGCCACTGCATTCCAGCCTGGGTGGCAGAG...ATGGAGACAGGCAGACAAAGTAGCCTCCGGTTGCAAGTGCCATGTGAAGTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAGCCTCCCAAGTAGCTaGCAGTACAGGCACGTACCA +
Preference number: 2 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYSLPSS*QYRHVP
Trigger: TGGTACGTGCCTGTACTGTCAGCTACTTGGGAGGCT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAGGATATGGTGGTACCTaGGGTAGGACAGGGAGTCTA +
Preference number: 2 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIGYGGT*GRTGSL
Trigger: TAGACTCCCTGTCCTACCTCAGGTACCACCATATCC...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGGAAATAGCACCAACTaGGGGGAGGGGTCAAGACTC +
Preference number: 2 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYGNSTN*GEGSRL
Trigger: GAGTCTTGACCCCTCCCCTCAGTTGGTGCTATTTCC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAGTGATCTCAGCTCACTaGAACCTCTGCTTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIVISAH*NLCFLG
Trigger: ACCCAGGAAGCAGAGGTTGCAGTGAGCTGAGATCAC...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATCTTCCTGAACCATCCTaGGCCCAAGTCTCACTTTGC +
Preference number: 2 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYLPEPS*AQVSLC
Trigger: GCAAAGTGAGACTTGGGCTCAGGATGGTTCAGGAAG...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATACTCAGGGAGGAATCTTaGCTACCACAGAAAACCCAG +
Preference number: 2 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNILREES*LPQKTQ
Trigger: CTGGGTTTTCTGTGGTAGTCAAGATTCCTCCCTGAG...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAGGGACTATGCTGGGTaGTGGAGTCCCAATGACGAA +
Preference number: 2 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYRDYAG*WSPNDE
Trigger: TTCGTCATTGGGACTCCAGCACCCAGCATAGTCCCT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp ATACCCAAATTTTGGAAACAAAGCATGAACGTGCTTCCAATTGCTCTGATAAAGCCACCCAGGCTGGAATaGAGTGGCACCATACCGGCT +
Preference number: 2 (lower is better)
Translates to: IPKFWKQSMNVLPIALIKPPRLE*SGTIPA
Trigger: AGCCGGTATGGTGCCACTGCATTCCAGCCTGGGTGG...CTTTATCAGAGCAATTGGAAGCACGTTCATGCTTTGTTTCCAAAATTTGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR-3UTR GCA 90 bp ATACCCAAATTTTGGAAACAAAGCATGAACGTGCTTCCAATTGCTCTGATAAAGCTGGGAGGCAGAGGTTaGGGTAAGCCGAGATCACGC +
Preference number: 2 (lower is better)
Translates to: IPKFWKQSMNVLPIALIKLGGRG*GKPRSR
Trigger: GCGTGATCTCGGCTTACCGCAACCTCTGCCTCCCAG...CTTTATCAGAGCAATTGGAAGCACGTTCATGCTTTGTTTCCAAAATTTGGGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAACAGGCTGGAGTGCGGTaGTGTGATCTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: PIIHHHLETSWVHILNRKQAGVR*CDLSSL
Trigger: CAGTGAGCTGAGATCACACCACCGCACTCCAGCCTG...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCAGGCTGGAGTGCGGTaGTGTGATCTCAGCTCACTG +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYQAGVR*CDLSSL
Trigger: CAGTGAGCTGAGATCACACCACCGCACTCCAGCCTG...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAGCTGCATGAGGAGGTaGGATATGGTGGTACCTGAG +
Preference number: 2 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYSCMRR*DMVVPE
Trigger: CTCAGGTACCACCATATCCCACCTCCTCATGCAGCT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR CAA 90 bp CTGTTAGTCCTCCTACACTTGATCCACACCACTCATTTATGCTGCTaGCCTAGCTCCACAGAGATTTGCTTTTTGAGCCCTGAATTCACT +
Preference number: 2 (lower is better)
Translates to: LLVLLHLIHTTHLCC*PSSTEICFLSPEFT
Trigger: AGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGAGCTAGGCAAGCAGCATAAATGAGTGGTGTGGATCAAGTGTAGGAGGACTAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACAGCCTCCCAAGTAGCTaGCAGTACAGGCACGTACCA +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYSLPSS*QYRHVP
Trigger: TGGTACGTGCCTGTACTGTCAGCTACTTGGGAGGCT...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAATCCAGGGAAGAGATaGTGGTGGCTTGGAATAGGG +
Preference number: 2 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYNPGKR*WWLGIG
Trigger: CCCTATTCCAAGCCACCATCATCTCTTCCCTGGATT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAGGAAATAGCACCAACTaGGGGGAGGGGTCAAGACTC +
Preference number: 2 (lower is better)
Translates to: FKNAGYPKALCFPCHIILGNSTN*GEGSRL
Trigger: GAGTCTTGACCCCTCCCCTCAGTTGGTGCTATTTCC...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCTGGGATTACAGGCGTaGTCCATCCACCATGCCAGT +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYLGLQA*SIHHAS
Trigger: ACTGGCATGGTGGATGGATCACGCCTGTAATCCCAG...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAGCTCACTGCAACCTCTaGTTCCTGGGTTCAAACAAT +
Preference number: 2 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIAHCNL*FLGSNN
Trigger: ATTGTTTGAACCCAGGAAGCAGAGGTTGCAGTGAGC...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCAAGGTGCCTGGAGCTaGATGAGGAGGTGGGATATG +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYQGAWS*MRRWDM
Trigger: CATATCCCACCTCCTCATGCAGCTCCAGGCACCTTG...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAACAAGGTGCCTGGAGCTaGATGAGGAGGTGGGATATG +
Preference number: 2 (lower is better)
Translates to: PIIHHHLETSWVHILNRKQGAWS*MRRWDM
Trigger: CATATCCCACCTCCTCATGCAGCTCCAGGCACCTTG...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCATCCACCATGCCAGTaGCCTGCTCCATGTCTCTCT +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYHPPCQ*PAPCLS
Trigger: AGAGAGACATGGAGCAGGGCACTGGCATGGTGGATG...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGTGAGCCCCTGCGCCTaGCCTCTGAGTTGTCTTTTT +
Preference number: 2 (lower is better)
Translates to: PIIHHHLETSWVHILNRKVSPCA*PLSCLF
Trigger: AAAAAGACAACTCAGAGGCCAGGCGCAGGGGCTCAC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAGTGAGCCCCTGCGCCTaGCCTCTGAGTTGTCTTTTT +
Preference number: 2 (lower is better)
Translates to: FKNAGYPKALCFPCHIILVSPCA*PLSCLF
Trigger: AAAAAGACAACTCAGAGGCCAGGCGCAGGGGCTCAC...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp TCCACAGAGATTTGCTTTTTGAGCCCTGAATTCACTGTTATTAGCAGTAGAATACAGGCTGGAATGCAGTaGCACCATACCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: STEICFLSPEFTVISSRIQAGMQ*HHTGSL
Trigger: CAGTGAGCCGGTATGGTGCCACTGCATTCCAGCCTG...TATTCTACTGCTAATAACAGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR CAA 90 bp TACTATTGTTCAAACTTCACATGGCACTTGCAACCGGAGGCTACTTaGTCTGCCTGTCTCCATACTCATGCTGTCTTATGCTCATGTTCT +
Preference number: 2 (lower is better)
Translates to: YYCSNFTWHLQPEAT*SACLHTHAVLCSCS
Trigger: AGAACATGAGCATAAGACAGCATGAGTATGGAGACAGGCAGACAAAGTAGCCTCCGGTTGCAAGTGCCATGTGAAGTTTGAACAATAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGGATATGGTGGTACCTaGGGTAGGACAGGGAGTCTA +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYGYGGT*GRTGSL
Trigger: TAGACTCCCTGTCCTACCTCAGGTACCACCATATCC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCTTCCTGAACCATCCTaGGCCCAAGTCTCACTTTGC +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYLPEPS*AQVSLC
Trigger: GCAAAGTGAGACTTGGGCTCAGGATGGTTCAGGAAG...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAACTGTCCAAGGCAAGTaGATACTTGATGCTTTGAGG +
Preference number: 2 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNITVQGK*ILDALR
Trigger: CCTCAAAGCATCAAGTATGCACTTGCCTTGGACAGT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TTCCCAATAGCTACAAATACTACTAATTTGCATATGTGTAGCATAGACGATGGTCTCAAGCAGTCCACCTaGCTCAGCCTCCCAAAGTGC +
Preference number: 2 (lower is better)
Translates to: FPIATNTTNLHMCSIDDGLKQST*LSLPKC
Trigger: GCACTTTGGGAGGCTGAGGCAGGTGGACTGCTTGAG...ACCATCGTCTATGCTACACATATGCAAATTAGTAGTATTTGTAGCTATTGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR-3UTR CCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTACTGGTCTCGAATTCCTaGTCTCAAGTGATCCACCCG +
Preference number: 2 (lower is better)
Translates to: FKNAGYPKALCFPCHIILLVSNS*SQVIHP
Trigger: CGGGTGGATCACTTGAGACCAGGAATTCGAGACCAG...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAAGCTGCATGAGGAGGTaGGATATGGTGGTACCTGAG +
Preference number: 2 (lower is better)
Translates to: PIIHHHLETSWVHILNRKSCMRR*DMVVPE
Trigger: CTCAGGTACCACCATATCCCACCTCCTCATGCAGCT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTCAGGGTTTTTGGCCTaGGCAACCAGAAGTATGGCA +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYSGFLA*ATRSMA
Trigger: TGCCATACTTCTGGTTGCTCAGGCCAAAAACCCTGA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATCAGGGTTTTTGGCCTaGGCAACCAGAAGTATGGCA +
Preference number: 2 (lower is better)
Translates to: PIIHHHLETSWVHILNRKSGFLA*ATRSMA
Trigger: TGCCATACTTCTGGTTGCTCAGGCCAAAAACCCTGA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACAATCCAGGGAAGAGATaGTGGTGGCTTGGAATAGGG +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYNPGKR*WWLGIG
Trigger: CCCTATTCCAAGCCACCATCATCTCTTCCCTGGATT...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAGAGCAGGTGAAAGCATaGATATATGTAGAGACAGAG +
Preference number: 2 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIEQVKA*IYVETE
Trigger: CTCTGTCTCTACATATATTCATGCTTTCACCTGCTC...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATACCAGAAGTATGGCATTaGCATTTACTGAGTTGGAGA +
Preference number: 2 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIPEVWH*HLLSWR
Trigger: TCTCCAACTCAGTAAATGGCAATGCCATACTTCTGG...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATACTGTCCAAGGCAAGTaGATACTTGATGCTTTGAGG +
Preference number: 2 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYTVQGK*ILDALR
Trigger: CCTCAAAGCATCAAGTATGCACTTGCCTTGGACAGT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAAAGTCAGGATGCAAATaGATCCAAGTGGTAGGAAAG +
Preference number: 2 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIKSGCK*IQVVGK
Trigger: CTTTCCTACCACTTGGATGCATTTGCATCCTGACTT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACACCATGCCAGTGCCCTaGTCCATGTCTCTCTTAACA +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYTMPVP*SMSLLT
Trigger: TGTTAAGAGAGACATGGAGCAGGGCACTGGCATGGT...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TCAAACTTCACATGGCACTTGCAACCGGAGGCTACTTTGTCTGCCTGTCTCCATCCTTTCTTGAAATCTTaGAACTATAATCCTCTTCCT +
Preference number: 2 (lower is better)
Translates to: SNFTWHLQPEATLSACLHPFLKS*NYNPLP
Trigger: AGGAAGAGGATTATAGTTGCAAGATTTCAAGAAAGG...ATGGAGACAGGCAGACAAAGTAGCCTCCGGTTGCAAGTGCCATGTGAAGTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR-3UTR GCA 90 bp AAAGCAAAAGCTGTAAAGAGATGTTCACAGGTTGAAGCCCACAGGTATGTTTTGACTTCACATGGCACTTaGAACCGGAGGCTACTTTGT +
Preference number: 2 (lower is better)
Translates to: KAKAVKRCSQVEAHRYVLTSHGT*NRRLLC
Trigger: ACAAAGTAGCCTCCGGTTGCAAGTGCCATGTGAAGT...CAAAACATACCTGTGGGCTTCAACCTGTGAACATCTCTTTACAGCTTTTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR-3UTR CCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAAGAAAACTGAACCTGTaGGCTCTGATAAGATCATCG +
Preference number: 2 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIRKLNL*ALIRSS
Trigger: CGATGATCTTATCAGAGCCCACAGGTTCAGTTTTCT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACAGTCTCAAAGGGCTGTaGTATGTGTGCGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYSLKGL*YVCVCV
Trigger: CACACACACGCACACATACCACAGCCCTTTGAGACT...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGCCAATGAATGGTTTTaGGCAGATGAATGGTATGAG +
Preference number: 2 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYANEWF*ADEWYE
Trigger: CTCATACCATTCATCTGCTCAAAACCATTCATTGGC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATACCTGGGTTCACATTTTaGACAGAAAAGAAATTGTGC +
Preference number: 2 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIPGFTF*TEKKLC
Trigger: GCACAATTTCTTTTCTGTTCAAAATGTGAACCCAGG...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGCTCACTGCAACCTCTaGTTCCTGGGTTCAAACAAT +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYAHCNL*FLGSNN
Trigger: ATTGTTTGAACCCAGGAAGCAGAGGTTGCAGTGAGC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATCCAGAAGTATGGCATTaGCATTTACTGAGTTGGAGA +
Preference number: 2 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYPEVWH*HLLSWR
Trigger: TCTCCAACTCAGTAAATGGCAATGCCATACTTCTGG...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAACTCAATCTGGAAGTTaGAATGAGCTTGACAATGTC +
Preference number: 2 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNITQSGS*NELDNV
Trigger: GACATTGTCAAGCTCATTGCAACTTCCAGATTGAGT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAGGAGGAGGGATCCAGTaGACAAGTAGAGTTCAGAAA +
Preference number: 2 (lower is better)
Translates to: FKNAGYPKALCFPCHIILGGGIQ*TSRVQK
Trigger: TTTCTGAACTCTACTTGTGCACTGGATCCCTCCTCC...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TCCACAGAGATTTGCTTTTTGAGCCCTGAATTCACTGTTATTAGCAGTAGAATAGGAGGCTACTTTGTCTaGCTGTCTCCATACTCATGC +
Preference number: 2 (lower is better)
Translates to: STEICFLSPEFTVISSRIGGYFV*LSPYSC
Trigger: GCATGAGTATGGAGACAGGCAGACAAAGTAGCCTCC...TATTCTACTGCTAATAACAGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGCAACCTCTGCTTCCTaGGTTCAAACAATTATTGTG +
Preference number: 2 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYATSAS*VQTIIV
Trigger: CACAATAATTGTTTGAACCCAGGAAGCAGAGGTTGC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATTCTAAGAAAGGCGAATaGTCCAAGGAAACTTCTTCC +
Preference number: 2 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYSKKGE*SKETSS
Trigger: GGAAGAAGTTTCCTTGGACCATTCGCCTTTCTTAGA...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAAGGAGAAGCAAGTTTaGGAGGGAAGACCAAGAATT +
Preference number: 2 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYKEKQV*EGRPRI
Trigger: AATTCTTGGTCTTCCCTCCCAAACTTGCTTCTCCTT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGGAGAAAATGGAGGCTaGAGGCATTTCAGAAGTCAG +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYGENGG*RHFRSQ
Trigger: CTGACTTCTGAAATGCCTCCAGCCTCCATTTTCTCC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAGAAAACTGAACCTGTaGGCTCTGATAAGATCATCG +
Preference number: 2 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYRKLNL*ALIRSS
Trigger: CGATGATCTTATCAGAGCCCACAGGTTCAGTTTTCT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGGGGAAAGGGAATGCTaGTGTATATATTCAAGGACG +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYGEREC*CIYSRT
Trigger: CGTCCTTGAATATATACATCAGCATTCCCTTTCCCC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGGGGAAAGGGAATGCTaGTGTATATATTCAAGGACG +
Preference number: 2 (lower is better)
Translates to: PIIHHHLETSWVHILNRKGEREC*CIYSRT
Trigger: CGTCCTTGAATATATACATCAGCATTCCCTTTCCCC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATATTGAAACCAGCCAAATaGATATGTGACAAGTCTCTT +
Preference number: 2 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNILKPAK*ICDKSL
Trigger: AAGAGACTTGTCACATATTCATTTGGCTGGTTTCAA...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATCCTGGGTTCACATTTTaGACAGAAAAGAAATTGTGC +
Preference number: 2 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYPGFTF*TEKKLC
Trigger: GCACAATTTCTTTTCTGTTCAAAATGTGAACCCAGG...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATACTCAATCTGGAAGTTaGAATGAGCTTGACAATGTC +
Preference number: 2 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYTQSGS*NELDNV
Trigger: GACATTGTCAAGCTCATTGCAACTTCCAGATTGAGT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATACATTGCTGCTTTTCCTaGCAGAAAATCATTACCTTT +
Preference number: 2 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIHCCFS*QKIITF
Trigger: AAAGGTAATGATTTTCTGGCAGGAAAAGCAGCAATG...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAAGAGGTCAAAAGAGGTaGTCAGCTTTAGATATATTG +
Preference number: 2 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIRGQKR*SALDIL
Trigger: CAATATATCTAAAGCTGACCACCTCTTTTGACCTCT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATCATCTAGAGACATCCTaGGTTCACATTTTGAACAGA +
Preference number: 2 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYHLETS*VHILNR
Trigger: TCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATG...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTATACCCAGTAATGGGATaGCTGGGTCAAACGGTATTT +
Preference number: 2 (lower is better)
Translates to: FKNAGYPKALCFPCHIILYPVMG*LGQTVF
Trigger: AAATACCGTTTGACCCAGCCATCCCATTACTGGGTA...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp TCCACAGAGATTTGCTTTTTGAGCCCTGAATTCACTGTTATTAGCAGTAGAATATGTTCAAACTTCACATaGCACTTGCAACCGGAGGCT +
Preference number: 2 (lower is better)
Translates to: STEICFLSPEFTVISSRICSNFT*HLQPEA
Trigger: AGCCTCCGGTTGCAAGTGCCATGTGAAGTTTGAACA...TATTCTACTGCTAATAACAGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR-3UTR TCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAAAGAAGAATCAAGGATaGCTTCAGGGTTTTTGGCCT +
Preference number: 2 (lower is better)
Translates to: PIIHHHLETSWVHILNRKKKNQG*LQGFWP
Trigger: AGGCCAAAAACCCTGAAGTCATCCTTGATTCTTCTT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAGCCAATGAATGGTTTTaGGCAGATGAATGGTATGAG +
Preference number: 2 (lower is better)
Translates to: FKNAGYPKALCFPCHIILANEWF*ADEWYE
Trigger: CTCATACCATTCATCTGCTCAAAACCATTCATTGGC...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATTTGAAACCAGCCAAATaGATATGTGACAAGTCTCTT +
Preference number: 2 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYLKPAK*ICDKSL
Trigger: AAGAGACTTGTCACATATTCATTTGGCTGGTTTCAA...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAGCACCTGTTGTCTCCTaGCTTTTTAATGATTGCCAT +
Preference number: 2 (lower is better)
Translates to: FKNAGYPKALCFPCHIILAPVVS*LFNDCH
Trigger: ATGGCAATCATTAAAAAGTCAGGAGACAACAGGTGC...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAAGGCTGGGTATTACCTaGGTAAAAAGTCCCTATTCT +
Preference number: 2 (lower is better)
Translates to: FKNAGYPKALCFPCHIILRLGIT*VKSPYS
Trigger: AGAATAGGGACTTTTTACTCAGGTAATACCCAGCCT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTATTCAAACAATTATTGTaGCTCAGCCTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: FKNAGYPKALCFPCHIILFKQLL*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCACAATAATTGTTTGAA...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATTCAAACAATTATTGTaGCTCAGCCTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: PIIHHHLETSWVHILNRKFKQLL*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCACAATAATTGTTTGAA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAATTCTACCATCATTTTaGCACTGGGATTATTTTCCT +
Preference number: 2 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIILPSF*HWDYFP
Trigger: AGGAAAATAATCCCAGTGGCAAAATGATGGTAGAAT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAAGGCACATGTCACCATaGCTGGCTTTCTTTTTCTTA +
Preference number: 2 (lower is better)
Translates to: FKNAGYPKALCFPCHIILRHMSP*LAFFFL
Trigger: TAAGAAAAAGAAAGCCAGGCATGGTGACATGTGCCT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGCAACCTCTGCTTCCTaGGTTCAAACAATTATTGTG +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYATSAS*VQTIIV
Trigger: CACAATAATTGTTTGAACCCAGGAAGCAGAGGTTGC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGAGCAACCAGAAGTATaGCATTGCCATTTACTGAGT +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYEQPEV*HCHLLS
Trigger: ACTCAGTAAATGGCAATGCCATACTTCTGGTTGCTC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGAGCAACCAGAAGTATaGCATTGCCATTTACTGAGT +
Preference number: 2 (lower is better)
Translates to: PIIHHHLETSWVHILNRKEQPEV*HCHLLS
Trigger: ACTCAGTAAATGGCAATGCCATACTTCTGGTTGCTC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATACTAATGGATTGGATATaGGTGCTAAAAGAAGAATCA +
Preference number: 2 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNILMDWI*VLKEES
Trigger: TGATTCTTCTTTTAGCACCCATATCCAATCCATTAG...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGAGATGATGGTGGCTTaGAATAGGGCGTTAATAGTA +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYEMMVA*NRALIV
Trigger: TACTATTAACGCCCTATTCCAAGCCACCATCATCTC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp ATACCCAAATTTTGGAAACAAAGCATGAACGTGCTTCCAATTGCTCTGATAAAGCTGGCAATACTAGGTTaGCACAGAAACAACAGGCTA +
Preference number: 2 (lower is better)
Translates to: IPKFWKQSMNVLPIALIKLAILG*HRNNRL
Trigger: TAGCCTGTTGTTTCTGTGCCAACCTAGTATTGCCAG...CTTTATCAGAGCAATTGGAAGCACGTTCATGCTTTGTTTCCAAAATTTGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR-3UTR TCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAGCAAGGTCAGGGCTATaGAATAATCCCAAAAACTTT +
Preference number: 2 (lower is better)
Translates to: FKNAGYPKALCFPCHIILARSGL*NNPKNF
Trigger: AAAGTTTTTGGGATTATTTCATAGCCCTGACCTTGC...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTTTCAGAAGTCAGGATaGAAATGCATCCAAGTGGTA +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYFQKSG*KCIQVV
Trigger: TACCACTTGGATGCATTTGCATCCTGACTTCTGAAA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp AAAGCAAAAGCTGTAAAGAGATGTTCACAGGTTGAAGCCCACAGGTATGTTTTGACTCATGCTGTCTTATaGTCATGTTCTTCACATCTA +
Preference number: 2 (lower is better)
Translates to: KAKAVKRCSQVEAHRYVLTHAVL*SCSSHL
Trigger: TAGATGTGAAGAACATGAGCATAAGACAGCATGAGT...CAAAACATACCTGTGGGCTTCAACCTGTGAACATCTCTTTACAGCTTTTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR-3UTR GCA 90 bp ATACCCAAATTTTGGAAACAAAGCATGAACGTGCTTCCAATTGCTCTGATAAAGCTGTCTCCATACTCATaGTGTCTTATGCTCATGTTC +
Preference number: 2 (lower is better)
Translates to: IPKFWKQSMNVLPIALIKLSPYS*CLMLMF
Trigger: GAACATGAGCATAAGACAGCATGAGTATGGAGACAG...CTTTATCAGAGCAATTGGAAGCACGTTCATGCTTTGTTTCCAAAATTTGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR-3UTR CCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCATCTAGAGACATCCTaGGTTCACATTTTGAACAGA +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYHLETS*VHILNR
Trigger: TCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATG...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR CAA 90 bp GATGGAGAAAAAGAATACAATACTTTGAGGTTCCTAGTAAGTATCTaGGGTGGCGTGGTAAATGGTAATGCCATTATGGAAGGTAAAGAA +
Preference number: 2 (lower is better)
Translates to: DGEKEYNTLRFLVSI*GGVVNGNAIMEGKE
Trigger: TTCTTTACCTTCCATAATGGCATTACCATTTACCACGCCACCCAAGATACTTACTAGGAACCTCAAAGTATTGTATTCTTTTTCTCCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR CAA 90 bp GTTCTCATTGTTCAATTCCCACCTATGAGTGAGAATATGTGGTGTTaGGTTTCTTGTTCTTGCGATAGTTTACTGAGAATGATGTTTTCC +
Preference number: 2 (lower is better)
Translates to: VLIVQFPPMSENMWC*VSCSCDSLLRMMFS
Trigger: GGAAAACATCATTCTCAGTAAACTATCGCAAGAACAAGAAACCAAACACCACATATTCTCACTCATAGGTGGGAATTGAACAATGAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAGAAAACTCAATTTGTTaGAGAAGCAACATGCTGTAC +
Preference number: 2 (lower is better)
Translates to: FKNAGYPKALCFPCHIILENSIC*RSNMLY
Trigger: GTACAGCATGTTGCTTCTTCAACAAATTGAGTTTTC...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR TCA 90 bp TTCCCAATAGCTACAAATACTACTAATTTGCATATGTGTAGCATAGACGATGGTAAAATTGGGTGGGCGTaGATAAGGAAGCAAAACTCA +
Preference number: 2 (lower is better)
Translates to: FPIATNTTNLHMCSIDDGKIGWA*IRKQNS
Trigger: TGAGTTTTGCTTCCTTATTCACGCCCACCCAATTTT...ACCATCGTCTATGCTACACATATGCAAATTAGTAGTATTTGTAGCTATTGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTACATTGCTGCTTTTCCTaGCAGAAAATCATTACCTTT +
Preference number: 2 (lower is better)
Translates to: FKNAGYPKALCFPCHIILHCCFS*QKIITF
Trigger: AAAGGTAATGATTTTCTGGCAGGAAAAGCAGCAATG...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTCCAACATCGTGCTTTaGACATTGGACATTCAAAAA +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYSNIVL*TLDIQK
Trigger: TTTTTGAATGTCCAATGTGCAAAGCACGATGTTGGA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAAGAGGTCAAAAGAGGTaGTCAGCTTTAGATATATTG +
Preference number: 2 (lower is better)
Translates to: PIIHHHLETSWVHILNRKRGQKR*SALDIL
Trigger: CAATATATCTAAAGCTGACCACCTCTTTTGACCTCT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTGTAAGAGTGAACTATaGATTTTTCTGGGAGAACAA +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYCKSEL*IFLGEQ
Trigger: TTGTTCTCCCAGAAAAATGCATAGTTCACTCTTACA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATGTAAGAGTGAACTATaGATTTTTCTGGGAGAACAA +
Preference number: 2 (lower is better)
Translates to: PIIHHHLETSWVHILNRKCKSEL*IFLGEQ
Trigger: TTGTTCTCCCAGAAAAATGCATAGTTCACTCTTACA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACATTCTACCATCATTTTaGCACTGGGATTATTTTCCT +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYILPSF*HWDYFP
Trigger: AGGAAAATAATCCCAGTGGCAAAATGATGGTAGAAT...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTTATACAAGATTGACTaGATCAATACTGGAGTGTTG +
Preference number: 2 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYLYKID*INTGVL
Trigger: CAACACTCCAGTATTGATGCAGTCAATCTTGTATAA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTATTGGTTTCTTGTTCTTaGGATAGTTTACTGAGAATG +
Preference number: 2 (lower is better)
Translates to: FKNAGYPKALCFPCHIILLVSCS*DSLLRM
Trigger: CATTCTCAGTAAACTATCGCAAGAACAAGAAACCAA...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTATACATGTGCACATTGTaGAGGTTACTTACATATGTA +
Preference number: 2 (lower is better)
Translates to: FKNAGYPKALCFPCHIILYMCTL*RLLTYV
Trigger: TACATATGTAAGTAACCTGCACAATGTGCACATGTA...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAACATGTCACCATGCCTaGCTTTCTTTTTCTTATTTA +
Preference number: 2 (lower is better)
Translates to: FKNAGYPKALCFPCHIILTCHHA*LSFSYL
Trigger: TAAATAAGAAAAAGAAAGCCAGGCATGGTGACATGT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR CAA 90 bp TATGGTTTGGTTAGACATCGTGTAAGTAAAATGACAGACTGTTTCTaGCTAGGAAGATATTCAACATTTAGGGCAGGTTCTAGTTGTAAA +
Preference number: 2 (lower is better)
Translates to: YGLVRHRVSKMTDCF*LGRYSTFRAGSSCK
Trigger: TTTACAACTAGAACCTGCCCTAAATGTTGAATATCTTCCTAGCAAGAAACAGTCTGTCATTTTACTTACACGATGTCTAACCAAACCATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR TCA 72 bp CTGGAGCTGCATGAGGAGGTGGGATATGGTGGTACCTaGGGTAGGACAGGGAGTCTAGGCCTGCAACTTTTA +
Preference number: 3 (lower is better)
Translates to: LELHEEVGYGGT*GRTGSLGLQLL
Trigger: TAAAAGTTGCAGGCCTAGACTCCCTGTCCTACCTCAGGTACCACCATATCCCACCTCCTCATGCAGCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR TCA 72 bp TACAGACTGTCCAAGGCAAGTGCATACTTGATGCTTTaGGGAGCACTGAGGCCAAGGTGCCTGGAGCTGCAT +
Preference number: 3 (lower is better)
Translates to: YRLSKASAYLML*GALRPRCLELH
Trigger: ATGCAGCTCCAGGCACCTTGGCCTCAGTGCTCCTCAAAGCATCAAGTATGCACTTGCCTTGGACAGTCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR GCA 72 bp CAGAGGGAATACCAAGTACAGACTGTCCAAGGCAAGTaGATACTTGATGCTTTGAGGAGCACTGAGGCCAAG +
Preference number: 3 (lower is better)
Translates to: QREYQVQTVQGK*ILDALRSTEAK
Trigger: CTTGGCCTCAGTGCTCCTCAAAGCATCAAGTATGCACTTGCCTTGGACAGTCTGTACTTGGTATTCCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR GCA 72 bp CTTCACATGGCACTTGCAACCGGAGGCTACTTTGTCTaGCTGTCTCCATACTCATGCTGTCTTATGCTCATG +
Preference number: 3 (lower is better)
Translates to: LHMALATGGYFV*LSPYSCCLMLM
Trigger: CATGAGCATAAGACAGCATGAGTATGGAGACAGGCAGACAAAGTAGCCTCCGGTTGCAAGTGCCATGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR TCA 72 bp TGGCTGGGTCAAACGGTATTTCCAGTTCTACATCCCTaGGGAATCGCCACACTGACTTCCACAATGGTTGAA +
Preference number: 3 (lower is better)
Translates to: WLGQTVFPVLHP*GIATLTSTMVE
Trigger: TTCAACCATTGTGGAAGTCAGTGTGGCGATTCCTCAGGGATGTAGAACTGGAAATACCGTTTGACCCAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp TTATGCTGCTTGCCTAGCTCCACAGAGATTTGCTTTTTGAGCCCTGAATTCACTCAACCGGAGGCTACTTaGTCTGCCTGTCTCCATACT +
Preference number: 3 (lower is better)
Translates to: LCCLPSSTEICFLSPEFTQPEAT*SACLHT
Trigger: AGTATGGAGACAGGCAGACAAAGTAGCCTCCGGTTG...AGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGAGCTAGGCAAGCAGCATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATATGCATACTTGATGCTTaGAGGAGCACTGAGGCCAAG +
Preference number: 3 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNICILDA*RSTEAK
Trigger: CTTGGCCTCAGTGCTCCTCAAAGCATCAAGTATGCA...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR GCA 72 bp CAGGGTTTTTGGCCTGAGCAACCAGAAGTATGGCATTaGCATTTACTGAGTTGGAGAAGACTGAAGGAGAAG +
Preference number: 3 (lower is better)
Translates to: QGFWPEQPEVWH*HLLSWRRLKEK
Trigger: CTTCTCCTTCAGTCTTCTCCAACTCAGTAAATGGCAATGCCATACTTCTGGTTGCTCAGGCCAAAAACCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR GCA 72 bp GTCCTCCTACACTTGATCCACACCACTCATTTATGCTaGTTGCCTAGCTCCACAGAGATTTGCTTTTTGAGC +
Preference number: 3 (lower is better)
Translates to: VLLHLIHTTHLC*LPSSTEICFLS
Trigger: GCTCAAAAAGCAAATCTCTGTGGAGCTAGGCAAGCAGCATAAATGAGTGGTGTGGATCAAGTGTAGGAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR GCA 72 bp AGCCCCATTTATTCAGGGCTCTTTAGTTTGCTACAGTaGCTGTTAGTCCTCCTACACTTGATCCACACCACT +
Preference number: 3 (lower is better)
Translates to: SPIYSGLFSLLQ*LLVLLHLIHTT
Trigger: AGTGGTGTGGATCAAGTGTAGGAGGACTAACAGGCACTGTAGCAAACTAAAGAGCCCTGAATAAATGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATCGCCTGGCCTCTGAGTaGTCTTTTTATGACAGCTTC +
Preference number: 3 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYRLASE*SFYDSF
Trigger: GAAGCTGTCATAAAAAGACAACTCAGAGGCCAGGCG...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR GCA 72 bp ATTGTGCAGGTTACTTACATATGTATACATGTGCCATaGTGGTGCACTGCACCCACTAACTCGTCATCTAGC +
Preference number: 3 (lower is better)
Translates to: IVQVTYICIHVP*WCTAPTNSSSS
Trigger: GCTAGATGACGAGTTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAAGTAACCTGCACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR GCA 72 bp TGCACATTGTGCAGGTTACTTACATATGTATACATGTaGCATGCTGGTGCACTGCACCCACTAACTCGTCAT +
Preference number: 3 (lower is better)
Translates to: CTLCRLLTYVYM*HAGALHPLTRH
Trigger: ATGACGAGTTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAAGTAACCTGCACAATGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR CCA 72 bp GTGCAGGTTACTTACATATGTATACATGTGCCATGCTaGTGCACTGCACCCACTAACTCGTCATCTAGCATT +
Preference number: 3 (lower is better)
Translates to: VQVTYICIHVPC*CTAPTNSSSSI
Trigger: AATGCTAGATGACGAGTTAGTGGGTGCAGTGCACCAGCATGGCACATGTATACATATGTAAGTAACCTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATTCTCAGGGAGGAATCTaGACTACCACAGAAAACCCA +
Preference number: 3 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYSQGGI*TTTENP
Trigger: TGGGTTTTCTGTGGTAGTCAAGATTCCTCCCTGAGA...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATATTCCTAGTAAGTATCTaGGGTGGCGTGGTAAATGGT +
Preference number: 3 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIFLVSI*GGVVNG
Trigger: ACCATTTACCACGCCACCCAAGATACTTACTAGGAA...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR TCA 72 bp AGGCCTGCAACTTTTAAGGACTTTGACTGCTCTGAGTaGGATGAGAAGCCAATGAATGGTTTTGAGCAGATG +
Preference number: 3 (lower is better)
Translates to: RPATFKDFDCSE*DEKPMNGFEQM
Trigger: CATCTGCTCAAAACCATTCATTGGCTTCTCATCTCACTCAGAGCAGTCAAAGTCCTTAAAAGTTGCAGGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR GCA 72 bp TTAGTCCTCCTACACTTGATCCACACCACTCATTTATaGTGCTTGCCTAGCTCCACAGAGATTTGCTTTTTG +
Preference number: 3 (lower is better)
Translates to: LVLLHLIHTTHL*CLPSSTEICFL
Trigger: CAAAAAGCAAATCTCTGTGGAGCTAGGCAAGCAGCATAAATGAGTGGTGTGGATCAAGTGTAGGAGGACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR CCA 72 bp TCTCTTGTACATTTTAAAGACCTGGCAATACTAGGTTaGCACAGAAACAACAGGCTAGGGACTAAGCCCCAT +
Preference number: 3 (lower is better)
Translates to: SLVHFKDLAILG*HRNNRLGTKPH
Trigger: ATGGGGCTTAGTCCCTAGCCTGTTGTTTCTGTGCCAACCTAGTATTGCCAGGTCTTTAAAATGTACAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATATCGCTATGTCCAAAGTaGTATGCTTCTTCCCTGAAA +
Preference number: 3 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNISLCPK*YASSLK
Trigger: TTTCAGGGAAGAAGCATACAACTTTGGACATAGCGA...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAACGCCTGGCCTCTGAGTaGTCTTTTTATGACAGCTTC +
Preference number: 3 (lower is better)
Translates to: PIIHHHLETSWVHILNRKRLASE*SFYDSF
Trigger: GAAGCTGTCATAAAAAGACAACTCAGAGGCCAGGCG...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATACAACTTTTAAGGACTTaGACTGCTCTGAGTGAGATG +
Preference number: 3 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIQLLRT*TALSEM
Trigger: CATCTCACTCAGAGCAGTCAAAGTCCTTAAAAGTTG...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTGCATACTTGATGCTTaGAGGAGCACTGAGGCCAAG +
Preference number: 3 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYCILDA*RSTEAK
Trigger: CTTGGCCTCAGTGCTCCTCAAAGCATCAAGTATGCA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAAGCCCAAGTCTCACTTaGCTGTCTTCCCTATTTCCC +
Preference number: 3 (lower is better)
Translates to: FKNAGYPKALCFPCHIILSPSLT*LSSLFP
Trigger: GGGAAATAGGGAAGACAGCAAAGTGAGACTTGGGCT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACAGCCCAAGTCTCACTTaGCTGTCTTCCCTATTTCCC +
Preference number: 3 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYSPSLT*LSSLFP
Trigger: GGGAAATAGGGAAGACAGCAAAGTGAGACTTGGGCT...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR TCA 72 bp CAAGACTCATGGGAAATAAATCTCAGGGAGGAATCTTaGCTACCACAGAAAACCCAGAGGAGTATGCAAAGA +
Preference number: 3 (lower is better)
Translates to: QDSWEINLREES*LPQKTQRSMQR
Trigger: TCTTTGCATACTCCTCTGGGTTTTCTGTGGTAGTCAAGATTCCTCCCTGAGATTTATTTCCCATGAGTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR CCA 72 bp ATTTATAGTCCTTTGGGTATATACCCAGTAATGGGATaGCTGGGTCAAACGGTATTTCCAGTTCTACATCCC +
Preference number: 3 (lower is better)
Translates to: IYSPLGIYPVMG*LGQTVFPVLHP
Trigger: GGGATGTAGAACTGGAAATACCGTTTGACCCAGCCATCCCATTACTGGGTATATACCCAAAGGACTATAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGAAGGAGAAGCAAGTTaGGGAGGGAAGACCAAGAAT +
Preference number: 3 (lower is better)
Translates to: PIIHHHLETSWVHILNRKEGEAS*GGKTKN
Trigger: ATTCTTGGTCTTCCCTCCCAAACTTGCTTCTCCTTC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATTTGCCATTTACTGAGTaGGAGAAGACTGAAGGAGAA +
Preference number: 3 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYLPFTE*EKTEGE
Trigger: TTCTCCTTCAGTCTTCTCCAACTCAGTAAATGGCAA...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTATCTTTTGGCTTAGGATaGACTTGGCGATATGGGCTC +
Preference number: 3 (lower is better)
Translates to: FKNAGYPKALCFPCHIILSFGLG*TWRYGL
Trigger: GAGCCCATATCGCCAAGTCAATCCTAAGCCAAAAGA...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp ATACCCAAATTTTGGAAACAAAGCATGAACGTGCTTCCAATTGCTCTGATAAAGAACTTCACATGGCACTaGCAACCGGAGGCTACTTTG +
Preference number: 3 (lower is better)
Translates to: IPKFWKQSMNVLPIALIKNFTWH*QPEATL
Trigger: CAAAGTAGCCTCCGGTTGCAAGTGCCATGTGAAGTT...CTTTATCAGAGCAATTGGAAGCACGTTCATGCTTTGTTTCCAAAATTTGGGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR GCA 72 bp ACTCATTTATGCTGCTTGCCTAGCTCCACAGAGATTTaGTTTTTGAGCCCTGAATTCACTGTTATTAGCAGT +
Preference number: 3 (lower is better)
Translates to: THLCCLPSSTEI*FLSPEFTVISS
Trigger: ACTGCTAATAACAGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGAGCTAGGCAAGCAGCATAAATGAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAATGACAGACTGTTTCTaGCTAGGAAGATATTCAACA +
Preference number: 3 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIMTDCF*LGRYST
Trigger: TGTTGAATATCTTCCTAGCAAGAAACAGTCTGTCAT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTCGCTATGTCCAAAGTaGTATGCTTCTTCCCTGAAA +
Preference number: 3 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYSLCPK*YASSLK
Trigger: TTTCAGGGAAGAAGCATACAACTTTGGACATAGCGA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTTGCCATTTACTGAGTaGGAGAAGACTGAAGGAGAA +
Preference number: 3 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYLPFTE*EKTEGE
Trigger: TTCTCCTTCAGTCTTCTCCAACTCAGTAAATGGCAA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTACAACTTTTAAGGACTTaGACTGCTCTGAGTGAGATG +
Preference number: 3 (lower is better)
Translates to: FKNAGYPKALCFPCHIILQLLRT*TALSEM
Trigger: CATCTCACTCAGAGCAGTCAAAGTCCTTAAAAGTTG...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAATTCTACCATCATTTaGCCACTGGGATTATTTTCC +
Preference number: 3 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYNSTII*PLGLFS
Trigger: GGAAAATAATCCCAGTGGCAAAATGATGGTAGAATT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp ATACCCAAATTTTGGAAACAAAGCATGAACGTGCTTCCAATTGCTCTGATAAAGAGAGATGTTCACAGGTaGAAGCCCACAGGTATGTTT +
Preference number: 3 (lower is better)
Translates to: IPKFWKQSMNVLPIALIKRDVHR*KPTGMF
Trigger: AAACATACCTGTGGGCTTCAACCTGTGAACATCTCT...CTTTATCAGAGCAATTGGAAGCACGTTCATGCTTTGTTTCCAAAATTTGGGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR TCA 72 bp TATGGCCATTTTCACGATATTGATTCTTCCTACCCATaGGCATGGAATGTTCTTCCATTTGGTTGTATCCTC +
Preference number: 3 (lower is better)
Translates to: YGHFHDIDSSYP*AWNVLPFGCIL
Trigger: GAGGATACAACCAAATGGAAGAACATTCCATGCTCATGGGTAGGAAGAATCAATATCGTGAAAATGGCCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR TCA 72 bp AAAGATCAGATAGTTGTAGATATGCGGCGTTATTTCTaGGGGCTCTGTTCTGTTCCAGTGATCTATATCTCT +
Preference number: 3 (lower is better)
Translates to: KDQIVVDMRRYF*GLCSVPVIYIS
Trigger: AGAGATATAGATCACTGGAACAGAACAGAGCCCTCAGAAATAACGCCGCATATCTACAACTATCTGATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAGAGAATATGTGGTGTTaGGTTTCTTGTTCTTGCGAT +
Preference number: 3 (lower is better)
Translates to: FKNAGYPKALCFPCHIILENMWC*VSCSCD
Trigger: ATCGCAAGAACAAGAAACCAAACACCACATATTCTC...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTATACCCACTGTTAACTTaGTGCTTAACTAAACTCTGC +
Preference number: 3 (lower is better)
Translates to: FKNAGYPKALCFPCHIILYPLLT*CLTKLC
Trigger: GCAGAGTTTAGTTAAGCACAAAGTTAACAGTGGGTA...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAAATTCTACCATCATTTaGCCACTGGGATTATTTTCC +
Preference number: 3 (lower is better)
Translates to: PIIHHHLETSWVHILNRKNSTII*PLGLFS
Trigger: GGAAAATAATCCCAGTGGCAAAATGATGGTAGAATT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAATGACAGACTGTTTCTaGCTAGGAAGATATTCAACA +
Preference number: 3 (lower is better)
Translates to: PIIHHHLETSWVHILNRKMTDCF*LGRYST
Trigger: TGTTGAATATCTTCCTAGCAAGAAACAGTCTGTCAT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAAAAAGACTGACATCTTaGAGAGCAAGAGTTTTTGTC +
Preference number: 3 (lower is better)
Translates to: FKNAGYPKALCFPCHIILKRLTS*RARVFV
Trigger: GACAAAAACTCTTGCTCTCAAAGATGTCAGTCTTTT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR-3UTR CAA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCTACATGTGTTATCCTaGCAAAGAAAAAGACTGACA +
Preference number: 3 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYLHVLS*QRKRLT
Trigger: TGTCAGTCTTTTTCTTTGCAAGGATAACACATGTAG...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR GCA 72 bp CAAATTTTGGAAACAAAGCATGAACGTGCTTCCAATTaGTCTGATAAAGATGAGAGAGTAAGAAGTGGGATT +
Preference number: 3 (lower is better)
Translates to: QILETKHERASN*SDKDERVRSGI
Trigger: AATCCCACTTCTTACTCTCTCATCTTTATCAGAGCAATTGGAAGCACGTTCATGCTTTGTTTCCAAAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR TCA 72 bp ATAGGCATGAGCCACTATGCTTGGTCAGCTAAATCTTaGATTCTTAATCCTTTCTTGAAATCTTGCAACTAT +
Preference number: 3 (lower is better)
Translates to: IGMSHYAWSAKS*ILNPFLKSCNY
Trigger: ATAGTTGCAAGATTTCAAGAAAGGATTAAGAATTCAAGATTTAGCTGACCAAGCATAGTGGCTCATGCCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR CAA 72 bp GTACAGACTGTCCAAGGCAAGTGCATACTTGATGCTTaGAGGAGCACTGAGGCCAAGGTGCCTGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VQTVQGKCILDA*RSTEAKVPGAA
Trigger: TGCAGCTCCAGGCACCTTGGCCTCAGTGCTCCTCAAAGCATCAAGTATGCACTTGCCTTGGACAGTCTGTAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAGCGGGGAGAGCCGAGTaGTGGCCCAGCCGAGAGGCG +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILAGRAE*WPSREA
Trigger: CGCCTCTCGGCTGGGCCAGCACTCGGCTCTCCCCGC...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000295025.12
CDS-3UTR GCA 90 bp GCTACAGTGCCTGTTAGTCCTCCTACACTTGATCCACACCACTCATTTATGCTGCCACCCAGGCTGGAATaGAGTGGCACCATACCGGCT +
Preference number: 4 (lower is better)
Translates to: ATVPVSPPTLDPHHSFMLPPRLE*SGTIPA
Trigger: AGCCGGTATGGTGCCACTGCATTCCAGCCTGGGTGG...CAGCATAAATGAGTGGTGTGGATCAAGTGTAGGAGGACTAACAGGCACTGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGAGAGGCGAGCAGCCTaGCGGGAGGGGAATTTCCCG +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYERRAA*REGNFP
Trigger: CGGGAAATTCCCCTCCCGCCAGGCTGCTCGCCTCTC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000295025.12
CDS-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATTGGGTTTGTATTGCCTaGGCGTGGGGTGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYWVCIA*AWGGVG
Trigger: GCCCACCCCACCCCACGCTCAGGCAATACAAACCCA...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATACAACCCCTGAATTCTTaGACCCCGGGTCACCCAGCG +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIQPLNS*TPGHPA
Trigger: CGCTGGGTGACCCGGGGTGCAAGAATTCAGGGGTTG...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGCCCTCCGCTGGGTTTaGGGCTCACACCTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYALRWV*GSHLPN
Trigger: GTTGGGAAGGTGTGAGCCGCAAACCCAGCGGAGGGC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAGCTCCCCTGGAATGCTaGCTGCTGATCGCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIAPLEC*LLIALH
Trigger: GTGAAGGGCGATCAGCAGGCAGCATTCCAGGGGAGC...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTATGCTGCTTGCCTAGCTCCACAGAGATTTGCTTTTTGAGCCCTGAATTCACTCTGGGAGGCAGAGGTTaGGGTAAGCCGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: LCCLPSSTEICFLSPEFTLGGRG*GKPRSR
Trigger: GCGTGATCTCGGCTTACCGCAACCTCTGCCTCCCAG...AGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGAGCTAGGCAAGCAGCATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATCTTCCCGCCCTCCGCTaGGTTTGCGGCTCACACCTT +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYLPALR*VCGSHL
Trigger: AAGGTGTGAGCCGCAAACCCAGCGGAGGGCGGGAAG...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAACGCACCGGAGGCCATaGCTCCGCTCCCCGCACCTT +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILTHRRP*LRSPHL
Trigger: AAGGTGCGGGGAGCGGAGCCATGGCCTCCGGTGCGT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAACGCACCGGAGGCCATaGCTCCGCTCCCCGCACCTT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKTHRRP*LRSPHL
Trigger: AAGGTGCGGGGAGCGGAGCCATGGCCTCCGGTGCGT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGAGCGTGGGGTGGGGTaGGCCACTGATGACCAGCTT +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYERGVG*ATDDQL
Trigger: AAGCTGGTCATCAGTGGCCCACCCCACCCCACGCTC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TTATGCTGCTTGCCTAGCTCCACAGAGATTTGCTTTTTGAGCCCTGAATTCACTCAGGCTGGAATGCAGTaGCACCATACCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: LCCLPSSTEICFLSPEFTQAGMQ*HHTGSL
Trigger: CAGTGAGCCGGTATGGTGCCACTGCATTCCAGCCTG...AGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGAGCTAGGCAAGCAGCATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR CCA 90 bp TTATGCTGCTTGCCTAGCTCCACAGAGATTTGCTTTTTGAGCCCTGAATTCACTCTCTGCCACCCAGGCTaGAATGCAGTGGCACCATAC +
Preference number: 4 (lower is better)
Translates to: LCCLPSSTEICFLSPEFTLCHPG*NAVAPY
Trigger: GTATGGTGCCACTGCATTCCAGCCTGGGTGGCAGAG...AGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGAGCTAGGCAAGCAGCATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR TCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTATGGGTTTGTATTGCCTaGGCGTGGGGTGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILWVCIA*AWGGVG
Trigger: GCCCACCCCACCCCACGCTCAGGCAATACAAACCCA...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAGGAAATAGCACCAACTaGGGGGAGGGGTCAAGACTC +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIGNSTN*GEGSRL
Trigger: GAGTCTTGACCCCTCCCCTCAGTTGGTGCTATTTCC...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAGCCCTCCGCTGGGTTTaGGGCTCACACCTTCCCAAC +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILALRWV*GSHLPN
Trigger: GTTGGGAAGGTGTGAGCCGCAAACCCAGCGGAGGGC...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATATCAGTGGGTTTGTATTaGCTGAGCGTGGGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNISVGLY*LSVGWG
Trigger: ACCCCACCCCACGCTCAGGCAATACAAACCCACTGA...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCTTCCCGCCCTCCGCTaGGTTTGCGGCTCACACCTT +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYLPALR*VCGSHL
Trigger: AAGGTGTGAGCCGCAAACCCAGCGGAGGGCGGGAAG...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGAGCGTGGGGTGGGGTaGGCCACTGATGACCAGCTT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKERGVG*ATDDQL
Trigger: AAGCTGGTCATCAGTGGCCCACCCCACCCCACGCTC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR CAA 72 bp TCAAACTTCACATGGCACTTGCAACCGGAGGCTACTTaGTCTGCCTGTCTCCATACTCATGCTGTCTTATGC +
Preference number: 4 (lower is better)
Translates to: SNFTWHLQPEAT*SACLHTHAVLC
Trigger: GCATAAGACAGCATGAGTATGGAGACAGGCAGACAAAGTAGCCTCCGGTTGCAAGTGCCATGTGAAGTTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR TCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTACACCTTCCCAACCCCTaGATTCTTGCACCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILHLPNP*ILAPRV
Trigger: GACCCGGGGTGCAAGAATTCAGGGGTTGGGAAGGTG...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCACCTTCCCAACCCCTaGATTCTTGCACCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYHLPNP*ILAPRV
Trigger: GACCCGGGGTGCAAGAATTCAGGGGTTGGGAAGGTG...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAGGAATTGGCGCCTGCTaGCATACTGGAAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIGIGAC*HTGRGH
Trigger: ATGTCCTCTTCCAGTATGTCAGCAGGCGCCAATTCC...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATCTGGGATTACAGGCGTaGTCCATCCACCATGCCAGT +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYLGLQA*SIHHAS
Trigger: ACTGGCATGGTGGATGGATCACGCCTGTAATCCCAG...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTACAACCCCTGAATTCTTaGACCCCGGGTCACCCAGCG +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILQPLNS*TPGHPA
Trigger: CGCTGGGTGACCCGGGGTGCAAGAATTCAGGGGTTG...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGCTCCCCTGGAATGCTaGCTGCTGATCGCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYAPLEC*LLIALH
Trigger: GTGAAGGGCGATCAGCAGGCAGCATTCCAGGGGAGC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATATTGTTGTCTGTGCTGTaGTCCCCTGGAATGCTGCCT +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNILLSVL*SPGMLP
Trigger: AGGCAGCATTCCAGGGGAGCACAGCACAGACAACAA...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAAGGGACTATGCTGGGTaGTGGAGTCCCAATGACGAA +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIRDYAG*WSPNDE
Trigger: TTCGTCATTGGGACTCCAGCACCCAGCATAGTCCCT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATACTGGTCTCGAATTCCTaGTCTCAAGTGATCCACCCG +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNILVSNS*SQVIHP
Trigger: CGGGTGGATCACTTGAGACCAGGAATTCGAGACCAG...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAAGCTGCATGAGGAGGTaGGATATGGTGGTACCTGAG +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNISCMRR*DMVVPE
Trigger: CTCAGGTACCACCATATCCCACCTCCTCATGCAGCT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAAGCCTCCCTAATAGCTaGGACCACAGGCACATGTCA +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNISLPNS*DHRHMS
Trigger: TGACATGTGCCTGTGGTCCCAGCTATTAGGGAGGCT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATATGGAATGCTGCCTGCTaGTCGCCCTTCACATTTGTA +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIWNAAC*SPFTFV
Trigger: TACAAATGTGAAGGGCGATCAGCAGGCAGCATTCCA...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATATCTTCCTTCTCCAATTaGACCGAGGAGACCAGGTCT +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNISSFSN*TEETRS
Trigger: AGACCTGGTCTCCTCGGTTCAATTGGAGAAGGAAGA...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGGAATTGGCGCCTGCTaGCATACTGGAAGAGGACAT +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYGIGAC*HTGRGH
Trigger: ATGTCCTCTTCCAGTATGTCAGCAGGCGCCAATTCC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAAATCCAGGGAAGAGATaGTGGTGGCTTGGAATAGGG +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNINPGKR*WWLGIG
Trigger: CCCTATTCCAAGCCACCATCATCTCTTCCCTGGATT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATTACTGGAGTGTTGTGTaGGGGTTAGGTGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYYWSVV*GLGAEA
Trigger: AGCCTCAGCACCTAACCCTCACACAACACTCCAGTA...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAATGCGGCGTTATTTCTaGGGGCTCTGTTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIMRRYF*GLCSVP
Trigger: TGGAACAGAACAGAGCCCTCAGAAATAACGCCGCAT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTATGTGCTCCCCTGGAATaGTGCCTGCTGATCGCCCTT +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILCAPLE*CLLIAL
Trigger: AAGGGCGATCAGCAGGCAGCATTCCAGGGGAGCACA...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATGTGCTCCCCTGGAATaGTGCCTGCTGATCGCCCTT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKCAPLE*CLLIAL
Trigger: AAGGGCGATCAGCAGGCAGCATTCCAGGGGAGCACA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGTGATCTCAGCTCACTaGAACCTCTGCTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYVISAH*NLCFLG
Trigger: ACCCAGGAAGCAGAGGTTGCAGTGAGCTGAGATCAC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TCAAACTTCACATGGCACTTGCAACCGGAGGCTACTTTGTCTGCCTGTCTCCATCTGTCTCCATACTCATaGTGTCTTATGCTCATGTTC +
Preference number: 4 (lower is better)
Translates to: SNFTWHLQPEATLSACLHLSPYS*CLMLMF
Trigger: GAACATGAGCATAAGACAGCATGAGTATGGAGACAG...ATGGAGACAGGCAGACAAAGTAGCCTCCGGTTGCAAGTGCCATGTGAAGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR CCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAACAATCCACTTGAGATaGGCCCAGGTGAGGGATAGT +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNITIHLR*AQVRDS
Trigger: ACTATCCCTCACCTGGGCCCATCTCAAGTGGATTGT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTACAGGCTGGAGTGCGGTaGTGTGATCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILQAGVR*CDLSSL
Trigger: CAGTGAGCTGAGATCACACCACCGCACTCCAGCCTG...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAGCCTCCCTAATAGCTaGGACCACAGGCACATGTCA +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYSLPNS*DHRHMS
Trigger: TGACATGTGCCTGTGGTCCCAGCTATTAGGGAGGCT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAAGCCTCCCAAGTAGCTaGCAGTACAGGCACGTACCA +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILSLPSS*QYRHVP
Trigger: TGGTACGTGCCTGTACTGTCAGCTACTTGGGAGGCT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATTCAGGGTTTTTGGCCTaGGCAACCAGAAGTATGGCA +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYSGFLA*ATRSMA
Trigger: TGCCATACTTCTGGTTGCTCAGGCCAAAAACCCTGA...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGGAAATAGCACCAACTaGGGGGAGGGGTCAAGACTC +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKGNSTN*GEGSRL
Trigger: GAGTCTTGACCCCTCCCCTCAGTTGGTGCTATTTCC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTACTGGGATTACAGGCGTaGTCCATCCACCATGCCAGT +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILLGLQA*SIHHAS
Trigger: ACTGGCATGGTGGATGGATCACGCCTGTAATCCCAG...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATCAGTGGGTTTGTATTaGCTGAGCGTGGGGTGGGGT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKSVGLY*LSVGWG
Trigger: ACCCCACCCCACGCTCAGGCAATACAAACCCACTGA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTACAAGGTGCCTGGAGCTaGATGAGGAGGTGGGATATG +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILQGAWS*MRRWDM
Trigger: CATATCCCACCTCCTCATGCAGCTCCAGGCACCTTG...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAACATCCACCATGCCAGTaGCCTGCTCCATGTCTCTCT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKHPPCQ*PAPCLS
Trigger: AGAGAGACATGGAGCAGGGCACTGGCATGGTGGATG...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGTGATCCATCCACCATaGCAGTGCCCTGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYVIHPP*QCPAPC
Trigger: ACATGGAGCAGGGCACTGGCATGGTGGATGGATCAC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGTGATCCATCCACCATaGCAGTGCCCTGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKVIHPP*QCPAPC
Trigger: ACATGGAGCAGGGCACTGGCATGGTGGATGGATCAC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTATGCTGCTTGCCTAGCTCCACAGAGATTTGCTTTTTGAGCCCTGAATTCACTACTTCACATGGCACTTaGAACCGGAGGCTACTTTGT +
Preference number: 4 (lower is better)
Translates to: LCCLPSSTEICFLSPEFTTSHGT*NRRLLC
Trigger: ACAAAGTAGCCTCCGGTTGCAAGTGCCATGTGAAGT...AGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGAGCTAGGCAAGCAGCATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATCGCCTGCTGACATACTaGAAGAGGACATCTGATGGA +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYRLLTY*KRTSDG
Trigger: TCCATCAGATGTCCTCTTCCAGTATGTCAGCAGGCG...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAGTCTCAAAGGGCTGTaGTATGTGTGCGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYSLKGL*YVCVCV
Trigger: CACACACACGCACACATACCACAGCCCTTTGAGACT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGGATTCTGCTTGACTTaGAACCCCTGTAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYGFCLT*NPCRHF
Trigger: GAAATGCCTACAGGGGTTTCAAGTCAAGCAGAATCC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATACTGGAGTGTTGTGTaGGGGTTAGGTGCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKYWSVV*GLGAEA
Trigger: AGCCTCAGCACCTAACCCTCACACAACACTCCAGTA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTTGTTGTCTGTGCTGTaGTCCCCTGGAATGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYLLSVL*SPGMLP
Trigger: AGGCAGCATTCCAGGGGAGCACAGCACAGACAACAA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTATTCGGTTGTTGTCTGTaGTGTGCTCCCCTGGAATGC +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILFGCCL*CAPLEC
Trigger: GCATTCCAGGGGAGCACAGCACAGACAACAACCGAA...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTTCGGTTGTTGTCTGTaGTGTGCTCCCCTGGAATGC +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYFGCCL*CAPLEC
Trigger: GCATTCCAGGGGAGCACAGCACAGACAACAACCGAA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATTATCAGTCTCTCCCATaGTGTCACTGCTGGTTGTCA +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYYQSLP*CHCWLS
Trigger: TGACAACCAGCAGTGACAGCATGGGAGAGACTGATA...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGCTCACTGCAACCTCTaGTTCCTGGGTTCAAACAAT +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYAHCNL*FLGSNN
Trigger: ATTGTTTGAACCCAGGAAGCAGAGGTTGCAGTGAGC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGTGATCTCAGCTCACTaGAACCTCTGCTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYVISAH*NLCFLG
Trigger: ACCCAGGAAGCAGAGGTTGCAGTGAGCTGAGATCAC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAGCATTCCCCTCTGCCTaGGTTGTTCAATTATCTCTA +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIAFPSA*VVQLSL
Trigger: TAGAGATAATTGAACAACCCAGGCAGAGGGGAATGC...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGGAGAAAATGGAGGCTaGAGGCATTTCAGAAGTCAG +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYGENGG*RHFRSQ
Trigger: CTGACTTCTGAAATGCCTCCAGCCTCCATTTTCTCC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATATACCCAGTAATGGGATaGCTGGGTCAAACGGTATTT +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIYPVMG*LGQTVF
Trigger: AAATACCGTTTGACCCAGCCATCCCATTACTGGGTA...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAACAGACTCAACCTCCTaGGTTCAAGGGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKTDSTS*VQGILP
Trigger: TGGGAGGATCCCTTGAACCCAGGAGGTTGAGTCTGT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTGGAATGCTGCCTGCTaGTCGCCCTTCACATTTGTA +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYWNAAC*SPFTFV
Trigger: TACAAATGTGAAGGGCGATCAGCAGGCAGCATTCCA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATCTTCCTTCTCCAATTaGACCGAGGAGACCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKSSFSN*TEETRS
Trigger: AGACCTGGTCTCCTCGGTTCAATTGGAGAAGGAAGA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAGGTGCCATTGAGGCATaGTGTGACAATCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILGAIEA*CDNPLE
Trigger: CTCAAGTGGATTGTCACATCATGCCTCAATGGCACC...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGGTGCCATTGAGGCATaGTGTGACAATCCACTTGAG +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYGAIEA*CDNPLE
Trigger: CTCAAGTGGATTGTCACATCATGCCTCAATGGCACC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAGCCAATGAATGGTTTTaGGCAGATGAATGGTATGAG +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIANEWF*ADEWYE
Trigger: CTCATACCATTCATCTGCTCAAAACCATTCATTGGC...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGGGGAAAGGGAATGCTaGTGTATATATTCAAGGACG +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYGEREC*CIYSRT
Trigger: CGTCCTTGAATATATACATCAGCATTCCCTTTCCCC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCTCAGGGAGGAATCTTaGCTACCACAGAAAACCCAG +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYLREES*LPQKTQ
Trigger: CTGGGTTTTCTGTGGTAGTCAAGATTCCTCCCTGAG...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACATGCGGCGTTATTTCTaGGGGCTCTGTTCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYMRRYF*GLCSVP
Trigger: TGGAACAGAACAGAGCCCTCAGAAATAACGCCGCAT...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAAACGCATTCCCCTCTaGCTGGGTTGTTCAATTATC +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYKRIPL*LGCSII
Trigger: GATAATTGAACAACCCAGGCAGAGGGGAATGCGTTT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATCTCCCATGCTGTCACTaGTGGTTGTCATCATATTCA +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYLPCCH*WLSSYS
Trigger: TGAATATGATGACAACCAGCAGTGACAGCATGGGAG...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAACCATGCCAGTGCCCTaGTCCATGTCTCTCTTAACA +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILTMPVP*SMSLLT
Trigger: TGTTAAGAGAGACATGGAGCAGGGCACTGGCATGGT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAAGGCACATGTCACCATaGCTGGCTTTCTTTTTCTTA +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIRHMSP*LAFFFL
Trigger: TAAGAAAAAGAAAGCCAGGCATGGTGACATGTGCCT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp GCTACAGTGCCTGTTAGTCCTCCTACACTTGATCCACACCACTCATTTATGCTGACTCATGCTGTCTTATaGTCATGTTCTTCACATCTA +
Preference number: 4 (lower is better)
Translates to: ATVPVSPPTLDPHHSFMLTHAVL*SCSSHL
Trigger: TAGATGTGAAGAACATGAGCATAAGACAGCATGAGT...CAGCATAAATGAGTGGTGTGGATCAAGTGTAGGAGGACTAACAGGCACTGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGAGGAGACCAGGTCTTaGTCTCTCAGGAAAATTAAC +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYEETRS*SLRKIN
Trigger: GTTAATTTTCCTGAGAGACCAAGACCTGGTCTCCTC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAACAATCCACTTGAGATaGGCCCAGGTGAGGGATAGT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKTIHLR*AQVRDS
Trigger: ACTATCCCTCACCTGGGCCCATCTCAAGTGGATTGT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAAGGTATTCTCAGGAATaGTGGGATACCTTGCGAATT +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIRYSQE*WDTLRI
Trigger: AATTCGCAAGGTATCCCACCATTCCTGAGAATACCT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATCCATGCTGTCACTGCTaGTTGTCATCATATTCACAG +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYPCCHC*LSSYSQ
Trigger: CTGTGAATATGATGACAACCAGCAGTGACAGCATGG...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAGCAACCTCTGCTTCCTaGGTTCAAACAATTATTGTG +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIATSAS*VQTIIV
Trigger: CACAATAATTGTTTGAACCCAGGAAGCAGAGGTTGC...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAAGTCTCAAAGGGCTGTaGTATGTGTGCGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKSLKGL*YVCVCV
Trigger: CACACACACGCACACATACCACAGCCCTTTGAGACT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp AAAGCAAAAGCTGTAAAGAGATGTTCACAGGTTGAAGCCCACAGGTATGTTTTGTGTTCAAACTTCACATaGCACTTGCAACCGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KAKAVKRCSQVEAHRYVLCSNFT*HLQPEA
Trigger: AGCCTCCGGTTGCAAGTGCCATGTGAAGTTTGAACA...CAAAACATACCTGTGGGCTTCAACCTGTGAACATCTCTTTACAGCTTTTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATTCAGGGAGAAAAACTTaGAAACACAGTCTCACCACA +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYSGRKT*KHSLTT
Trigger: TGTGGTGAGACTGTGTTTTCAAGTTTTTCTCCCTGA...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGTGTACATCAGCTTGTaGAAAGATGCCTTTTGCTTC +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYVYISL*KDAFCF
Trigger: GAAGCAAAAGGCATCTTTTCACAAGCTGATGTACAC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAGGATTCTGCTTGACTTaGAACCCCTGTAGGCATTTC +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILGFCLT*NPCRHF
Trigger: GAAATGCCTACAGGGGTTTCAAGTCAAGCAGAATCC...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAGGAAGTGTCCTTGTTaGAAAACTACTCAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYRKCPC*KTTQWV
Trigger: AACCCACTGAGTAGTTTTTCAACAAGGACACTTCCT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATTGTTATCTGCACAACTaGAGTCAGATCCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYCYLHN*SQIPQM
Trigger: CATTTGAGGGATCTGACTTCAGTTGTGCAGATAACA...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATACATACTGCCAATACCTaGATACTGACTATCTTGAAC +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIHTANT*ILTILN
Trigger: GTTCAAGATAGTCAGTATTCAGGTATTGGCAGTATG...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAAGAAGAATCAAGGATaGCTTCAGGGTTTTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYKKNQG*LQGFWP
Trigger: AGGCCAAAAACCCTGAAGTCATCCTTGATTCTTCTT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGCACCTGTTGTCTCCTaGCTTTTTAATGATTGCCAT +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYAPVVS*LFNDCH
Trigger: ATGGCAATCATTAAAAAGTCAGGAGACAACAGGTGC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAGGCTGGGTATTACCTaGGTAAAAAGTCCCTATTCT +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYRLGIT*VKSPYS
Trigger: AGAATAGGGACTTTTTACTCAGGTAATACCCAGCCT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATACATAGTAGCCGTCTCTaGAGTCTTTTCCAACTAAAT +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIHSSRL*SLFQLN
Trigger: ATTTAGTTGGAAAAGACTGCAGAGACGGCTACTATG...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATCAGCTTGTGAAAAGATaGCTTTTGCTTCCCAATCGT +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYQLVKR*LLLPNR
Trigger: ACGATTGGGAAGCAAAAGGCATCTTTTCACAAGCTG...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAATGGTGGGATACCTTaGGAATTAGAAGGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYNGGIP*ELEGSV
Trigger: GACACTTCCTTCTAATTCGCAAGGTATCCCACCATT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAAGTCAGGATGCAAATaGATCCAAGTGGTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYKSGCK*IQVVGK
Trigger: CTTTCCTACCACTTGGATGCATTTGCATCCTGACTT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAAACCCAGAGGAGTATaGAAAGAGGGAAGTATAGGA +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYKPRGV*KEGSIG
Trigger: TCCTATACTTCCCTCTTTGCATACTCCTCTGGGTTT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp GCTACAGTGCCTGTTAGTCCTCCTACACTTGATCCACACCACTCATTTATGCTGCCTTTCTTGAAATCTTaGAACTATAATCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ATVPVSPPTLDPHHSFMLPFLKS*NYNPLP
Trigger: AGGAAGAGGATTATAGTTGCAAGATTTCAAGAAAGG...CAGCATAAATGAGTGGTGTGGATCAAGTGTAGGAGGACTAACAGGCACTGTAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR GCA 90 bp TTATGCTGCTTGCCTAGCTCCACAGAGATTTGCTTTTTGAGCCCTGAATTCACTGAACGTGCTTCCAATTaGTCTGATAAAGATGAGAGA +
Preference number: 4 (lower is better)
Translates to: LCCLPSSTEICFLSPEFTERASN*SDKDER
Trigger: TCTCTCATCTTTATCAGAGCAATTGGAAGCACGTTC...AGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGAGCTAGGCAAGCAGCATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGATTCACTAACTTCCTaGTCAGAAGGTCTCCGCAAC +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKDSLTS*SEGLRN
Trigger: GTTGCGGAGACCTTCTGACCAGGAAGTTAGTGAATC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAGATTCACTAACTTCCTaGTCAGAAGGTCTCCGCAAC +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILDSLTS*SEGLRN
Trigger: GTTGCGGAGACCTTCTGACCAGGAAGTTAGTGAATC...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATTCCTGGCACAGTTTCTaGAAAAGCAGAGTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYSWHSF*KSRVVF
Trigger: AAAGACAACTCTGCTTTTCCAGAAACTGTGCCAGGA...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAAGTTCAAGACCATCCTaGTCAACATGGCGAAACCCT +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILSSRPS*STWRNP
Trigger: AGGGTTTCGCCATGTTGACCAGGATGGTCTTGAACT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000295025.12
CDS-3UTR CCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAAATCTGCTGATGGCATaGATGACGCTTCCATTCCGA +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILNLLMA*MTLPFR
Trigger: TCGGAATGGAAGCGTCATCCATGCCATCAGCAGATT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAAATCTGCTGATGGCATaGATGACGCTTCCATTCCGA +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKNLLMA*MTLPFR
Trigger: TCGGAATGGAAGCGTCATCCATGCCATCAGCAGATT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGAGATGATGGTGGCTTaGAATAGGGCGTTAATAGTA +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYEMMVA*NRALIV
Trigger: TACTATTAACGCCCTATTCCAAGCCACCATCATCTC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATACATCTAGAGACATCCTaGGTTCACATTTTGAACAGA +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIHLETS*VHILNR
Trigger: TCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATG...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGGGCTAAGGAATAACTaGGAAGGGAGAAAATGGAGG +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYGLRNN*EGRKWR
Trigger: CCTCCATTTTCTCCCTTCCCAGTTATTCCTTAGCCC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAGGGCTAAGGAATAACTaGGAAGGGAGAAAATGGAGG +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILGLRNN*EGRKWR
Trigger: CCTCCATTTTCTCCCTTCCCAGTTATTCCTTAGCCC...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAAATATGGTGGAGTTTTaGAAACAATGGCTACTTGAC +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNINMVEF*KQWLLD
Trigger: GTCAAGTAGCCATTGTTTTCAAAACTCCACCATATT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATCTCACAACTGCATCATaGGAAAACAAGTTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYLTTAS*ENKFGS
Trigger: AGAACCAAACTTGTTTTCTCATGATGCAGTTGTGAG...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGCAAGGTCAGGGCTATaGAATAATCCCAAAAACTTT +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYARSGL*NNPKNF
Trigger: AAAGTTTTTGGGATTATTTCATAGCCCTGACCTTGC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATTCTGTTCTGTTCCAGTaGTCTATATCTCTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYSVLFQ*SISLFW
Trigger: CCAAAACAGAGATATAGATCACTGGAACAGAACAGA...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATCAGGAAAATTAACGTaGTCCTGGCACAGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKSGKLT*SWHSFW
Trigger: CCAGAAACTGTGCCAGGATCACGTTAATTTTCCTGA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAAAACGCATTCCCCTCTaGCTGGGTTGTTCAATTATC +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILKRIPL*LGCSII
Trigger: GATAATTGAACAACCCAGGCAGAGGGGAATGCGTTT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATTTCTTGTCCAAATTCTaGTTCATAGTAGCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYFLSKF*FIVAVS
Trigger: AGAGACGGCTACTATGAAGCAGAATTTGGACAAGAA...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGAAGGTCTCCGCAACTaGATTTTTACTGTTACGGGT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKEGLRN*IFTVTG
Trigger: ACCCGTAACAGTAAAAATGCAGTTGCGGAGACCTTC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGAAGGTCTCCGCAACTaGATTTTTACTGTTACGGGT +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYEGLRN*IFTVTG
Trigger: ACCCGTAACAGTAAAAATGCAGTTGCGGAGACCTTC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCTCCCATGCTGTCACTaGTGGTTGTCATCATATTCA +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYLPCCH*WLSSYS
Trigger: TGAATATGATGACAACCAGCAGTGACAGCATGGGAG...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAACTGTCCAAGGCAAGTaGATACTTGATGCTTTGAGG +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKTVQGK*ILDALR
Trigger: CCTCAAAGCATCAAGTATGCACTTGCCTTGGACAGT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATATCCAACATCGTGCTTTaGACATTGGACATTCAAAAA +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNISNIVL*TLDIQK
Trigger: TTTTTGAATGTCCAATGTGCAAAGCACGATGTTGGA...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGCATTCCCCTCTGCCTaGGTTGTTCAATTATCTCTA +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKAFPSA*VVQLSL
Trigger: TAGAGATAATTGAACAACCCAGGCAGAGGGGAATGC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAACGGTTGTCATAAATTaGGTTCGAGACAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILTVVIN*VRDNRR
Trigger: CCTCCTGTTGTCTCGAACCCAATTTATGACAACCGT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAACGGTTGTCATAAATTaGGTTCGAGACAACAGGAGG +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKTVVIN*VRDNRR
Trigger: CCTCCTGTTGTCTCGAACCCAATTTATGACAACCGT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATTATTCTCAGGAATGGTaGGATACCTTGCGAATTAGA +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYYSQEW*DTLRIR
Trigger: TCTAATTCGCAAGGTATCCCACCATTCCTGAGAATA...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAACCATGCTGTCACTGCTaGTTGTCATCATATTCACAG +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKPCCHC*LSSYSQ
Trigger: CTGTGAATATGATGACAACCAGCAGTGACAGCATGG...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATCAGGGAGAAAAACTTaGAAACACAGTCTCACCACA +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKSGRKT*KHSLTT
Trigger: TGTGGTGAGACTGTGTTTTCAAGTTTTTCTCCCTGA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAATATGGTGGAGTTTTaGAAACAATGGCTACTTGAC +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYNMVEF*KQWLLD
Trigger: GTCAAGTAGCCATTGTTTTCAAAACTCCACCATATT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAAGGAAGTGTCCTTGTTaGAAAACTACTCAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILRKCPC*KTTQWV
Trigger: AACCCACTGAGTAGTTTTTCAACAAGGACACTTCCT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATGTTATCTGCACAACTaGAGTCAGATCCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKCYLHN*SQIPQM
Trigger: CATTTGAGGGATCTGACTTCAGTTGTGCAGATAACA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGCCAATGAATGGTTTTaGGCAGATGAATGGTATGAG +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYANEWF*ADEWYE
Trigger: CTCATACCATTCATCTGCTCAAAACCATTCATTGGC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGAGCAGGTGAAAGCATaGATATATGTAGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKEQVKA*IYVETE
Trigger: CTCTGTCTCTACATATATTCATGCTTTCACCTGCTC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGAGCAGGTGAAAGCATaGATATATGTAGAGACAGAG +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYEQVKA*IYVETE
Trigger: CTCTGTCTCTACATATATTCATGCTTTCACCTGCTC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGCACCTGTTGTCTCCTaGCTTTTTAATGATTGCCAT +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYAPVVS*LFNDCH
Trigger: ATGGCAATCATTAAAAAGTCAGGAGACAACAGGTGC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp AAAGCAAAAGCTGTAAAGAGATGTTCACAGGTTGAAGCCCACAGGTATGTTTTGCAGAGATTTGCTTTTTaGGCCCTGAATTCACTGTTA +
Preference number: 4 (lower is better)
Translates to: KAKAVKRCSQVEAHRYVLQRFAF*ALNSLL
Trigger: TAACAGTGAATTCAGGGCTCAAAAAGCAAATCTCTG...CAAAACATACCTGTGGGCTTCAACCTGTGAACATCTCTTTACAGCTTTTGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR TCA 90 bp TCCACAGAGATTTGCTTTTTGAGCCCTGAATTCACTGTTATTAGCAGTAGAATAGAGATGTTCACAGGTTaGAGCCCACAGGTATGTTTT +
Preference number: 4 (lower is better)
Translates to: STEICFLSPEFTVISSRIEMFTG*SPQVCF
Trigger: AAAACATACCTGTGGGCTTCAACCTGTGAACATCTC...TATTCTACTGCTAATAACAGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTACAGCTTGTGAAAAGATaGCTTTTGCTTCCCAATCGT +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILQLVKR*LLLPNR
Trigger: ACGATTGGGAAGCAAAAGGCATCTTTTCACAAGCTG...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAAATGGTGGGATACCTTaGGAATTAGAAGGAAGTGTC +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILNGGIP*ELEGSV
Trigger: GACACTTCCTTCTAATTCGCAAGGTATCCCACCATT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTTCAAACAATTATTGTaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYFKQLL*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCACAATAATTGTTTGAA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTACCAGAAGTATGGCATTaGCATTTACTGAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILPEVWH*HLLSWR
Trigger: TCTCCAACTCAGTAAATGGCAATGCCATACTTCTGG...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAAAGTCAGGATGCAAATaGATCCAAGTGGTAGGAAAG +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKKSGCK*IQVVGK
Trigger: CTTTCCTACCACTTGGATGCATTTGCATCCTGACTT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAAAACCCAGAGGAGTATaGAAAGAGGGAAGTATAGGA +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKKPRGV*KEGSIG
Trigger: TCCTATACTTCCCTCTTTGCATACTCCTCTGGGTTT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATATTATACAAGATTGACTaGATCAATACTGGAGTGTTG +
Preference number: 4 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNILYKID*INTGVL
Trigger: CAACACTCCAGTATTGATGCAGTCAATCTTGTATAA...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGCTTTAGGGTACATGTaGACATTGTGCAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKALGYM*TLCRLL
Trigger: AAGTAACCTGCACAATGTGCACATGTACCCTAAAGC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGCTTTAGGGTACATGTaGACATTGTGCAGGTTACTT +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYALGYM*TLCRLL
Trigger: AAGTAACCTGCACAATGTGCACATGTACCCTAAAGC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAAGGCACATGTCACCATaGCTGGCTTTCTTTTTCTTA +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKRHMSP*LAFFFL
Trigger: TAAGAAAAAGAAAGCCAGGCATGGTGACATGTGCCT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATTTCAGGGACATTGAATaGATTGATTCCTGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYFRDIE*IDSCLY
Trigger: ATAAAGGCAGGAATCAATCCATTCAATGTCCCTGAA...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTCCTGGCACAGTTTCTaGAAAAGCAGAGTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYSWHSF*KSRVVF
Trigger: AAAGACAACTCTGCTTTTCCAGAAACTGTGCCAGGA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAAGGTATTCTCAGGAATaGTGGGATACCTTGCGAATT +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILRYSQE*WDTLRI
Trigger: AATTCGCAAGGTATCCCACCATTCCTGAGAATACCT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGCAACCTCTGCTTCCTaGGTTCAAACAATTATTGTG +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKATSAS*VQTIIV
Trigger: CACAATAATTGTTTGAACCCAGGAAGCAGAGGTTGC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATCTAAGAAAGGCGAATaGTCCAAGGAAACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKSKKGE*SKETSS
Trigger: GGAAGAAGTTTCCTTGGACCATTCGCCTTTCTTAGA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAAAGGAGAAGCAAGTTTaGGAGGGAAGACCAAGAATT +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILKEKQV*EGRPRI
Trigger: AATTCTTGGTCTTCCCTCCCAAACTTGCTTCTCCTT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAAGAAAACTGAACCTGTaGGCTCTGATAAGATCATCG +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKRKLNL*ALIRSS
Trigger: CGATGATCTTATCAGAGCCCACAGGTTCAGTTTTCT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGTTCATTGTAGATTCTaGATATTAGCCCTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYVHCRF*ILALCQ
Trigger: CTGACAAAGGGCTAATATCCAGAATCTACAATGAAC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATATTTTGGTATTCTGCTaGGATCTACATTCATCACAG +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYILVFC*DLHSSQ
Trigger: CTGTGATGAATGTAGATCCCAGCAGAATACCAAAAT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TCCACAGAGATTTGCTTTTTGAGCCCTGAATTCACTGTTATTAGCAGTAGAATACTGGCAATACTAGGTTaGCACAGAAACAACAGGCTA +
Preference number: 4 (lower is better)
Translates to: STEICFLSPEFTVISSRILAILG*HRNNRL
Trigger: TAGCCTGTTGTTTCTGTGCCAACCTAGTATTGCCAG...TATTCTACTGCTAATAACAGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR CAA 72 bp ATTGTGAAGGTAGGGTCTACCAGATTTGCTAATGGATaGGATATGGGTGCTAAAAGAAGAATCAAGGATGAC +
Preference number: 4 (lower is better)
Translates to: IVKVGSTRFANG*DMGAKRRIKDD
Trigger: GTCATCCTTGATTCTTCTTTTAGCACCCATATCCAATCCATTAGCAAATCTGGTAGACCCTACCTTCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
3UTR CAA 72 bp TTATGCTGCTTGCCTAGCTCCACAGAGATTTGCTTTTaGAGCCCTGAATTCACTGTTATTAGCAGTAGAATA +
Preference number: 4 (lower is better)
Translates to: LCCLPSSTEICF*SPEFTVISSRI
Trigger: TATTCTACTGCTAATAACAGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGAGCTAGGCAAGCAGCATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR TCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAACAGTCTCACCACATTaGGGTCACAATCTTCAATAT +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILTVSPH*GHNLQY
Trigger: ATATTGAAGATTGTGACCTCAATGTGGTGAGACTGT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTACTCACAACTGCATCATaGGAAAACAAGTTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILLTTAS*ENKFGS
Trigger: AGAACCAAACTTGTTTTCTCATGATGCAGTTGTGAG...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATGGATTAGTACTGTTTaGTGGTCCCGACTCATTTAT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKWISTV*WSRLIY
Trigger: ATAAATGAGTCGGGACCATCAAACAGTACTAATCCA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTATGGATTAGTACTGTTTaGTGGTCCCGACTCATTTAT +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILWISTV*WSRLIY
Trigger: ATAAATGAGTCGGGACCATCAAACAGTACTAATCCA...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTACCTGGGTTCACATTTTaGACAGAAAAGAAATTGTGC +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILPGFTF*TEKKLC
Trigger: GCACAATTTCTTTTCTGTTCAAAATGTGAACCCAGG...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCTGGGTTCACATTTTaGACAGAAAAGAAATTGTGC +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYPGFTF*TEKKLC
Trigger: GCACAATTTCTTTTCTGTTCAAAATGTGAACCCAGG...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGCAAGGTCAGGGCTATaGAATAATCCCAAAAACTTT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKARSGL*NNPKNF
Trigger: AAAGTTTTTGGGATTATTTCATAGCCCTGACCTTGC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTCTGTTCTGTTCCAGTaGTCTATATCTCTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYSVLFQ*SISLFW
Trigger: CCAAAACAGAGATATAGATCACTGGAACAGAACAGA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACAAGCTACTTGAACTGTaGGACAGTGACCAACATTAT +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYKLLEL*DSDQHY
Trigger: ATAATGTTGGTCACTGTCTCACAGTTCAAGTAGCTT...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp ATACCCAAATTTTGGAAACAAAGCATGAACGTGCTTCCAATTGCTCTGATAAAGAAAATTGGGTGGGCGTaGATAAGGAAGCAAAACTCA +
Preference number: 4 (lower is better)
Translates to: IPKFWKQSMNVLPIALIKKIGWA*IRKQNS
Trigger: TGAGTTTTGCTTCCTTATTCACGCCCACCCAATTTT...CTTTATCAGAGCAATTGGAAGCACGTTCATGCTTTGTTTCCAAAATTTGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR TCA 90 bp TCCACAGAGATTTGCTTTTTGAGCCCTGAATTCACTGTTATTAGCAGTAGAATATCAGGTAATTGCATATaGACATCTGGATTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: STEICFLSPEFTVISSRISGNCI*TSGFPA
Trigger: AGCCGGAAATCCAGATGTTCATATGCAATTACCTGA...TATTCTACTGCTAATAACAGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR TCA 90 bp ATACCCAAATTTTGGAAACAAAGCATGAACGTGCTTCCAATTGCTCTGATAAAGTTTGGAAACAAAGCATaGACGTGCTTCCAATTGCTC +
Preference number: 4 (lower is better)
Translates to: IPKFWKQSMNVLPIALIKFGNKA*TCFQLL
Trigger: GAGCAATTGGAAGCACGTTCATGCTTTGTTTCCAAA...CTTTATCAGAGCAATTGGAAGCACGTTCATGCTTTGTTTCCAAAATTTGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAACATAGTAGCCGTCTCTaGAGTCTTTTCCAACTAAAT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKHSSRL*SLFQLN
Trigger: ATTTAGTTGGAAAAGACTGCAGAGACGGCTACTATG...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATTCTTGTCCAAATTCTaGTTCATAGTAGCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKFLSKF*FIVAVS
Trigger: AGAGACGGCTACTATGAAGCAGAATTTGGACAAGAA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATATCATGCTGTTATCTaGACAACTGAAGTCAGATCC +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKYHAVI*TTEVRS
Trigger: GGATCTGACTTCAGTTGTGCAGATAACAGCATGATA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAAAGGAGTCACTCAATTaGTCATTTTGCATACTGCCA +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKKESLN*SFCILP
Trigger: TGGCAGTATGCAAAATGAGCAATTGAGTGACTCCTT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAACTCAATCTGGAAGTTaGAATGAGCTTGACAATGTC +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILTQSGS*NELDNV
Trigger: GACATTGTCAAGCTCATTGCAACTTCCAGATTGAGT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTATTTCAGAAGTCAGGATaGAAATGCATCCAAGTGGTA +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILFQKSG*KCIQVV
Trigger: TACCACTTGGATGCATTTGCATCCTGACTTCTGAAA...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATTTATACAAGATTGACTaGATCAATACTGGAGTGTTG +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYLYKID*INTGVL
Trigger: CAACACTCCAGTATTGATGCAGTCAATCTTGTATAA...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAAGGAAATTTCAGGGGTaGTGGAAATGTCCTAAACAT +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILRKFQG*WKCPKH
Trigger: ATGTTTAGGACATTTCCAGCACCCCTGAAATTTCCT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAAGGAAATTTCAGGGGTaGTGGAAATGTCCTAAACAT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKRKFQG*WKCPKH
Trigger: ATGTTTAGGACATTTCCAGCACCCCTGAAATTTCCT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTATATTCTCAGGAATGGTaGGATACCTTGCGAATTAGA +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILYSQEW*DTLRIR
Trigger: TCTAATTCGCAAGGTATCCCACCATTCCTGAGAATA...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATCTAATGGATTGGATATaGGTGCTAAAAGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYLMDWI*VLKEES
Trigger: TGATTCTTCTTTTAGCACCCATATCCAATCCATTAG...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp AAAGCAAAAGCTGTAAAGAGATGTTCACAGGTTGAAGCCCACAGGTATGTTTTGCGAATACCCAAATTTTaGAAACAAAGCATGAACGTG +
Preference number: 4 (lower is better)
Translates to: KAKAVKRCSQVEAHRYVLRIPKF*KQSMNV
Trigger: CACGTTCATGCTTTGTTTCCAAAATTTGGGTATTCG...CAAAACATACCTGTGGGCTTCAACCTGTGAACATCTCTTTACAGCTTTTGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642725.1
3UTR CAA 72 bp GTTCAATTCCCACCTATGAGTGAGAATATGTGGTGTTaGGTTTCTTGTTCTTGCGATAGTTTACTGAGAATG +
Preference number: 4 (lower is better)
Translates to: VQFPPMSENMWC*VSCSCDSLLRM
Trigger: CATTCTCAGTAAACTATCGCAAGAACAAGAAACCAAACACCACATATTCTCACTCATAGGTGGGAATTGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTTGAAACCAGCCAAATaGATATGTGACAAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYLKPAK*ICDKSL
Trigger: AAGAGACTTGTCACATATTCATTTGGCTGGTTTCAA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATTGAAACCAGCCAAATaGATATGTGACAAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKLKPAK*ICDKSL
Trigger: AAGAGACTTGTCACATATTCATTTGGCTGGTTTCAA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTATGTTCACTATGGTTGTaGGAAGCCCAGTTATTTAAA +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILCSLWL*EAQLFK
Trigger: TTTAAATAACTGGGCTTCTCACAACCATAGTGAACA...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAACATCATGAGTTTTCCTaGAGTATTAGGTTAGACGTT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKHHEFS*SIRLDV
Trigger: AACGTCTAACCTAATACTTCAGGAAAACTCATGATG...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCATCATGAGTTTTCCTaGAGTATTAGGTTAGACGTT +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYHHEFS*SIRLDV
Trigger: AACGTCTAACCTAATACTTCAGGAAAACTCATGATG...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGAAAACTCAATTTGTTaGAGAAGCAACATGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYENSIC*RSNMLY
Trigger: GTACAGCATGTTGCTTCTTCAACAAATTGAGTTTTC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR TCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGAAAACTCAATTTGTTaGAGAAGCAACATGCTGTAC +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKENSIC*RSNMLY
Trigger: GTACAGCATGTTGCTTCTTCAACAAATTGAGTTTTC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TCCACAGAGATTTGCTTTTTGAGCCCTGAATTCACTGTTATTAGCAGTAGAATACATAGTAGCCGTCTCTaGAGTCTTTTCCAACTAAAT +
Preference number: 4 (lower is better)
Translates to: STEICFLSPEFTVISSRIHSSRL*SLFQLN
Trigger: ATTTAGTTGGAAAAGACTGCAGAGACGGCTACTATG...TATTCTACTGCTAATAACAGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCATTGCTGCTTTTCCTaGCAGAAAATCATTACCTTT +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYHCCFS*QKIITF
Trigger: AAAGGTAATGATTTTCTGGCAGGAAAAGCAGCAATG...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGCTTTGTGTTTTCCTTaGCACATCATCTTAAAGCTA +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKALCFP*HIILKL
Trigger: TAGCTTTAAGATGATGTGGCAAGGAAAACACAAAGC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAGCTTTGTGTTTTCCTTaGCACATCATCTTAAAGCTA +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILALCFP*HIILKL
Trigger: TAGCTTTAAGATGATGTGGCAAGGAAAACACAAAGC...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAAGGATTTTGGTATTCTaGTGGGATCTACATTCATCA +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKRILVF*WDLHSS
Trigger: TGATGAATGTAGATCCCAGCAGAATACCAAAATCCT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACAGGATTTTGGTATTCTaGTGGGATCTACATTCATCA +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYRILVF*WDLHSS
Trigger: TGATGAATGTAGATCCCAGCAGAATACCAAAATCCT...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTCCCAATAGCTACAAATACTACTAATTTGCATATGTGTAGCATAGACGATGGTAGCTCCACAGAGATTTaGTTTTTGAGCCCTGAATTC +
Preference number: 4 (lower is better)
Translates to: FPIATNTTNLHMCSIDDGSSTEI*FLSPEF
Trigger: GAATTCAGGGCTCAAAAAGCAAATCTCTGTGGAGCT...ACCATCGTCTATGCTACACATATGCAAATTAGTAGTATTTGTAGCTATTGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR CCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTTCAGGGACATTGAATaGATTGATTCCTGCCTTTAT +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYFRDIE*IDSCLY
Trigger: ATAAAGGCAGGAATCAATCCATTCAATGTCCCTGAA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACAGAGGTCAAAAGAGGTaGTCAGCTTTAGATATATTG +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYRGQKR*SALDIL
Trigger: CAATATATCTAAAGCTGACCACCTCTTTTGACCTCT...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGTTCATTGTAGATTCTaGATATTAGCCCTTTGTCAG +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYVHCRF*ILALCQ
Trigger: CTGACAAAGGGCTAATATCCAGAATCTACAATGAAC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACATTTTGGTATTCTGCTaGGATCTACATTCATCACAG +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYILVFC*DLHSSQ
Trigger: CTGTGATGAATGTAGATCCCAGCAGAATACCAAAAT...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp ATACCCAAATTTTGGAAACAAAGCATGAACGTGCTTCCAATTGCTCTGATAAAGTTGCATATGAACATCTaGATTTCCGGCTTCTCTTGT +
Preference number: 4 (lower is better)
Translates to: IPKFWKQSMNVLPIALIKLHMNI*ISGFSC
Trigger: ACAAGAGAAGCCGGAAATCCAGATGTTCATATGCAA...CTTTATCAGAGCAATTGGAAGCACGTTCATGCTTTGTTTCCAAAATTTGGGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR GCA 90 bp TTCCCAATAGCTACAAATACTACTAATTTGCATATGTGTAGCATAGACGATGGTTTCTTGTCCAAATTCTaGTTCATAGTAGCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: FPIATNTTNLHMCSIDDGFLSKF*FIVAVS
Trigger: AGAGACGGCTACTATGAAGCAGAATTTGGACAAGAA...ACCATCGTCTATGCTACACATATGCAAATTAGTAGTATTTGTAGCTATTGGGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR GCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCATTTCTCTCACAACTaGATCATGAGAAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYHFSHN*IMRKQV
Trigger: AACTTGTTTTCTCATGATGCAGTTGTGAGAGAAATG...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAACATTTCTCTCACAACTaGATCATGAGAAAACAAGTT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKHFSHN*IMRKQV
Trigger: AACTTGTTTTCTCATGATGCAGTTGTGAGAGAAATG...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGGTTTTCAAGATTCATaGTCAGAAGTCTTGGATTAT +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKGFQDS*SEVLDY
Trigger: ATAATCCAAGACTTCTGAGCATGAATCTTGAAAACC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTATGTAAGAGTGAACTATaGATTTTTCTGGGAGAACAA +
Preference number: 4 (lower is better)
Translates to: FKNAGYPKALCFPCHIILCKSEL*IFLGEQ
Trigger: TTGTTCTCCCAGAAAAATGCATAGTTCACTCTTACA...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATTGGTTTCTTGTTCTTaGGATAGTTTACTGAGAATG +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKLVSCS*DSLLRM
Trigger: CATTCTCAGTAAACTATCGCAAGAACAAGAAACCAA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATACATGTGCACATTGTaGAGGTTACTTACATATGTA +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKYMCTL*RLLTYV
Trigger: TACATATGTAAGTAACCTGCACAATGTGCACATGTA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACAGAATATGTGGTGTTTaGTTTCTTGTTCTTGCGATA +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYRICGV*FLVLAI
Trigger: TATCGCAAGAACAAGAAACCAAACACCACATATTCT...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAACATGTCACCATGCCTaGCTTTCTTTTTCTTATTTA +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKTCHHA*LSFSYL
Trigger: TAAATAAGAAAAAGAAAGCCAGGCATGGTGACATGT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACACATGTCACCATGCCTaGCTTTCTTTTTCTTATTTA +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYTCHHA*LSFSYL
Trigger: TAAATAAGAAAAAGAAAGCCAGGCATGGTGACATGT...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTCTAAAGGGTTCACCTaGTCAAAAACCATACATTTA +
Preference number: 4 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYSKGFT*SKTIHL
Trigger: TAAATGTATGGTTTTTGACCAGGTGAACCCTTTAGA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CCA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATCTAAAGGGTTCACCTaGTCAAAAACCATACATTTA +
Preference number: 4 (lower is better)
Translates to: PIIHHHLETSWVHILNRKSKGFT*SKTIHL
Trigger: TAAATGTATGGTTTTTGACCAGGTGAACCCTTTAGA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR GCA 90 bp TCCACAGAGATTTGCTTTTTGAGCCCTGAATTCACTGTTATTAGCAGTAGAATAAAATTAACAAAGGTCTaGGTTCTTGTCCAAATTCTG +
Preference number: 4 (lower is better)
Translates to: STEICFLSPEFTVISSRIKLTKV*VLVQIL
Trigger: CAGAATTTGGACAAGAACGCAGACCTTTGTTAATTT...TATTCTACTGCTAATAACAGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS TCA 90 bp CTTCCCGCCCTCCGCTGGGTTTGCGGCTCACACCTTCCCAACCCCTaGATTCTTGCACCCCGGGTCACCCAGCGTCGCCGTCCACCGTAC +
Preference number: 5 (lower is better)
Translates to: LPALRWVCGSHLPNP*ILAPRVTQRRRPPY
Trigger: GTACGGTGGACGGCGACGCTGGGTGACCCGGGGTGCAAGAATTCAGGGGTTGGGAAGGTGTGAGCCGCAAACCCAGCGGAGGGCGGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS CCA 90 bp TTGTTGAAAAACTACTCAGTGGGTTTGTATTGCCTGAGCGTGGGGTaGGGTGGGCCACTGATGACCAGCTTGAAGAAGGCAGAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: LLKNYSVGLYCLSVG*GGPLMTSLKKAEVP
Trigger: TGGCACCTCTGCCTTCTTCAAGCTGGTCATCAGTGGCCCACCCCACCCCACGCTCAGGCAATACAAACCCACTGAGTAGTTTTTCAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATCGCCCTCCGCTGGGTTaGCGGCTCACACCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYRPPLG*RLTPSQ
Trigger: TTGGGAAGGTGTGAGCCGCAAACCCAGCGGAGGGCG...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS CCA 90 bp AAGGCAGAGGTGCCATTGAGGCATGATGTGACAATCCACTTGAGATaGGCCCAGGTGAGGGATAGTAGGATTCTGCTTGACTTGAAACCC +
Preference number: 5 (lower is better)
Translates to: KAEVPLRHDVTIHLR*AQVRDSRILLDLKP
Trigger: GGGTTTCAAGTCAAGCAGAATCCTACTATCCCTCACCTGGGCCCATCTCAAGTGGATTGTCACATCATGCCTCAATGGCACCTCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TCAAACTTCACATGGCACTTGCAACCGGAGGCTACTTTGTCTGCCTGTCTCCATCAACCGGAGGCTACTTaGTCTGCCTGTCTCCATACT +
Preference number: 5 (lower is better)
Translates to: SNFTWHLQPEATLSACLHQPEAT*SACLHT
Trigger: AGTATGGAGACAGGCAGACAAAGTAGCCTCCGGTTG...ATGGAGACAGGCAGACAAAGTAGCCTCCGGTTGCAAGTGCCATGTGAAGTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTACGCCCTCCGCTGGGTTaGCGGCTCACACCTTCCCAA +
Preference number: 5 (lower is better)
Translates to: FKNAGYPKALCFPCHIILRPPLG*RLTPSQ
Trigger: TTGGGAAGGTGTGAGCCGCAAACCCAGCGGAGGGCG...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TCAAACTTCACATGGCACTTGCAACCGGAGGCTACTTTGTCTGCCTGTCTCCATAACTTCACATGGCACTaGCAACCGGAGGCTACTTTG +
Preference number: 5 (lower is better)
Translates to: SNFTWHLQPEATLSACLHNFTWH*QPEATL
Trigger: CAAAGTAGCCTCCGGTTGCAAGTGCCATGTGAAGTT...ATGGAGACAGGCAGACAAAGTAGCCTCCGGTTGCAAGTGCCATGTGAAGTTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR CAA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCAACCCCTGAATTCTaGCACCCCGGGTCACCCAGC +
Preference number: 5 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYPTPEF*HPGSPS
Trigger: GCTGGGTGACCCGGGGTGCAAGAATTCAGGGGTTGG...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAACCAACCCCTGAATTCTaGCACCCCGGGTCACCCAGC +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKPTPEF*HPGSPS
Trigger: GCTGGGTGACCCGGGGTGCAAGAATTCAGGGGTTGG...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAGGGTATGTTCGGTTGTaGTCTGTGCTGTGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIGYVRL*SVLCSP
Trigger: AGGGGAGCACAGCACAGACAACAACCGAACATACCC...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS GCA 90 bp TTCATAATCTGGATAGAAGGGTATGTTCGGTTGTTGTCTGTGCTGTaGTCCCCTGGAATGCTGCCTGCTGATCGCCCTTCACATTTGTAT +
Preference number: 5 (lower is better)
Translates to: FIIWIEGYVRLLSVL*SPGMLPADRPSHLY
Trigger: ATACAAATGTGAAGGGCGATCAGCAGGCAGCATTCCAGGGGAGCACAGCACAGACAACAACCGAACATACCCTTCTATCCAGATTATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAGAAGGGTATGTTCGGTaGTTGTCTGTGCTGTGCTCC +
Preference number: 5 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIEGYVR*LSVLCS
Trigger: GGAGCACAGCACAGACAACAACCGAACATACCCTTC...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAACTCAGTGGGTTTGTATaGCCTGAGCGTGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKLSGFV*PERGVG
Trigger: CCCCACCCCACGCTCAGGCAATACAAACCCACTGAG...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTACTCAGTGGGTTTGTATaGCCTGAGCGTGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: FKNAGYPKALCFPCHIILLSGFV*PERGVG
Trigger: CCCCACCCCACGCTCAGGCAATACAAACCCACTGAG...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS GCA 90 bp CCTGCTGATCGCCCTTCACATTTGTATCTAAAACGCATTCCCCTCTaGCTGGGTTGTTCAATTATCTCTATATACGGGTTATACGCACCG +
Preference number: 5 (lower is better)
Translates to: PADRPSHLYLKRIPL*LGCSIISIYGLYAP
Trigger: CGGTGCGTATAACCCGTATATAGAGATAATTGAACAACCCAGGCAGAGGGGAATGCGTTTTAGATACAAATGTGAAGGGCGATCAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGAAGGGTATGTTCGGTaGTTGTCTGTGCTGTGCTCC +
Preference number: 5 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYEGYVR*LSVLCS
Trigger: GGAGCACAGCACAGACAACAACCGAACATACCCTTC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAACTACTCAGTGGGTTaGTATTGCCTGAGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYNYSVG*YCLSVG
Trigger: CCCCACGCTCAGGCAATACAAACCCACTGAGTAGTT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATACGCCTGGCCTCTGAGTaGTCTTTTTATGACAGCTTC +
Preference number: 5 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIRLASE*SFYDSF
Trigger: GAAGCTGTCATAAAAAGACAACTCAGAGGCCAGGCG...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS TCA 90 bp GTAGTATTGGAATTGGCGCCTGCTGACATACTGGAAGAGGACATCTaGTGGAGCTGTCTCAAGTCTCTTGGGTCTAACACTGAATTACAT +
Preference number: 5 (lower is better)
Translates to: VVLELAPADILEEDI*WSCLKSLGSNTELH
Trigger: ATGTAATTCAGTGTTAGACCCAAGAGACTTGAGACAGCTCCATCAGATGTCCTCTTCCAGTATGTCAGCAGGCGCCAATTCCAATACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGGGTATGTTCGGTTGTaGTCTGTGCTGTGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKGYVRL*SVLCSP
Trigger: AGGGGAGCACAGCACAGACAACAACCGAACATACCC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCCACTGATGACCAGCTaGAAGAAGGCAGAGGTGCCA +
Preference number: 5 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYPLMTS*KKAEVP
Trigger: TGGCACCTCTGCCTTCTTCAAGCTGGTCATCAGTGG...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAACAGTAGTATTGGAATaGGCGCCTGCTGACATACTG +
Preference number: 5 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNITVVLE*APADIL
Trigger: CAGTATGTCAGCAGGCGCCAATTCCAATACTACTGT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAGCCCAAGTCTCACTTaGCTGTCTTCCCTATTTCCC +
Preference number: 5 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYSPSLT*LSSLFP
Trigger: GGGAAATAGGGAAGACAGCAAAGTGAGACTTGGGCT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATATCTTTTGGCTTAGGATaGACTTGGCGATATGGGCTC +
Preference number: 5 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNISFGLG*TWRYGL
Trigger: GAGCCCATATCGCCAAGTCAATCCTAAGCCAAAAGA...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAGATCGCCCTTCACATTaGTATCTAAAACGCATTCCC +
Preference number: 5 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIDRPSH*YLKRIP
Trigger: GGGAATGCGTTTTAGATACAAATGTGAAGGGCGATC...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATCACGGTTGTCATAAATaGGGTTCGAGACAACAGGAG +
Preference number: 5 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYHGCHK*GSRQQE
Trigger: CTCCTGTTGTCTCGAACCCAATTTATGACAACCGTG...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAAACTACTCAGTGGGTTaGTATTGCCTGAGCGTGGGG +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKNYSVG*YCLSVG
Trigger: CCCCACGCTCAGGCAATACAAACCCACTGAGTAGTT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAGAATGGTGGGATACCTaGCGAATTAGAAGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIEWWDT*RIRRKC
Trigger: ACACTTCCTTCTAATTCGCAAGGTATCCCACCATTC...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATATCATGCTCAGAAGTCTaGGATTATCAGTCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNISCSEV*DYQSLP
Trigger: TGGGAGAGACTGATAATCCAAGACTTCTGAGCATGA...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATACAGTAGTATTGGAATaGGCGCCTGCTGACATACTG +
Preference number: 5 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYTVVLE*APADIL
Trigger: CAGTATGTCAGCAGGCGCCAATTCCAATACTACTGT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGAAGGAGAAGCAAGTTaGGGAGGGAAGACCAAGAAT +
Preference number: 5 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYEGEAS*GGKTKN
Trigger: ATTCTTGGTCTTCCCTCCCAAACTTGCTTCTCCTTC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAAAGGCATTGGTAGCTaGATGGGGATGGCACTGAAT +
Preference number: 5 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYKGIGS*MGMALN
Trigger: ATTCAGTGCCATCCCCATCAAGCTACCAATGCCTTT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATATCCCCTCTGCCTGGGTaGTTCAATTATCTCTATATA +
Preference number: 5 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNISPLPG*FNYLYI
Trigger: TATATAGAGATAATTGAACAACCCAGGCAGAGGGGA...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATACACAGTCTCACCACATaGAGGTCACAATCTTCAATA +
Preference number: 5 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIHSLTT*RSQSSI
Trigger: TATTGAAGATTGTGACCTCAATGTGGTGAGACTGTG...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAGGTTCTGTGATAGCTTaGCAATATGGTGGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIGSVIA*QYGGVL
Trigger: CAAAACTCCACCATATTGCAAAGCTATCACAGAACC...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACATCTTCCTTCTCCAATaGAACCGAGGAGACCAGGTC +
Preference number: 5 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYIFLLQ*NRGDQV
Trigger: GACCTGGTCTCCTCGGTTCAATTGGAGAAGGAAGAT...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAATCTTCCTTCTCCAATaGAACCGAGGAGACCAGGTC +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKIFLLQ*NRGDQV
Trigger: GACCTGGTCTCCTCGGTTCAATTGGAGAAGGAAGAT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAAAGGCAGAGGTGCCATaGAGGCATGATGTGACAATC +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKKAEVP*RHDVTI
Trigger: GATTGTCACATCATGCCTCAATGGCACCTCTGCCTT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAAAGGCAGAGGTGCCATaGAGGCATGATGTGACAATC +
Preference number: 5 (lower is better)
Translates to: FKNAGYPKALCFPCHIILKAEVP*RHDVTI
Trigger: GATTGTCACATCATGCCTCAATGGCACCTCTGCCTT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGCTGTCTCAAGTCTCTaGGGTCTAACACTGAATTAC +
Preference number: 5 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYAVSSL*GLTLNY
Trigger: GTAATTCAGTGTTAGACCCAAGAGACTTGAGACAGC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATATTGCCATTTACTGAGTaGGAGAAGACTGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNILPFTE*EKTEGE
Trigger: TTCTCCTTCAGTCTTCTCCAACTCAGTAAATGGCAA...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTATGCATACTTGATGCTTaGAGGAGCACTGAGGCCAAG +
Preference number: 5 (lower is better)
Translates to: FKNAGYPKALCFPCHIILCILDA*RSTEAK
Trigger: CTTGGCCTCAGTGCTCCTCAAAGCATCAAGTATGCA...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp AAAGCAAAAGCTGTAAAGAGATGTTCACAGGTTGAAGCCCACAGGTATGTTTTGTCAGGGCTCTTTAGTTaGCTACAGTGCCTGTTAGTC +
Preference number: 5 (lower is better)
Translates to: KAKAVKRCSQVEAHRYVLSGLFS*LQCLLV
Trigger: GACTAACAGGCACTGTAGCAAACTAAAGAGCCCTGA...CAAAACATACCTGTGGGCTTCAACCTGTGAACATCTCTTTACAGCTTTTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR CAA 90 bp TTATGCTGCTTGCCTAGCTCCACAGAGATTTGCTTTTTGAGCCCTGAATTCACTGATTTCCGGCTTCTCTaGTACATTTTAAAGACCTGG +
Preference number: 5 (lower is better)
Translates to: LCCLPSSTEICFLSPEFTDFRLL*YILKTW
Trigger: CCAGGTCTTTAAAATGTACAAGAGAAGCCGGAAATC...AGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGAGCTAGGCAAGCAGCATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS GCA 90 bp AAGGTCTGCGTTCTTGTCCAAATTCTGCTTCATAGTAGCCGTCTCTaGAGTCTTTTCCAACTAAATCATGAGGATGAGGTTTATATGGGT +
Preference number: 5 (lower is better)
Translates to: KVCVLVQILLHSSRL*SLFQLNHEDEVYMG
Trigger: ACCCATATAAACCTCATCCTCATGATTTAGTTGGAAAAGACTGCAGAGACGGCTACTATGAAGCAGAATTTGGACAAGAACGCAGACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295025.12
ENST00000394479.4
ENST00000642725.1
CDS CCA 90 bp ACAGCATGTTGGGATCAGAAATACCATATAAATCTGCTGATGGCATaGATGACGCTTCCATTCCGACTATGTCATCGGCATTGTTGTAAA +
Preference number: 5 (lower is better)
Translates to: TACWDQKYHINLLMA*MTLPFRLCHRHCCK
Trigger: TTTACAACAATGCCGATGACATAGTCGGAATGGAAGCGTCATCCATGCCATCAGCAGATTTATATGGTATTTCTGATCCCAACATGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATATCGAATACCCAAATTTaGGAAAAACAAAGGTCTGCG +
Preference number: 5 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNISNTQI*EKQRSA
Trigger: CGCAGACCTTTGTTTTTCCAAAATTTGGGTATTCGA...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTACACGGTTGTCATAAATaGGGTTCGAGACAACAGGAG +
Preference number: 5 (lower is better)
Translates to: FKNAGYPKALCFPCHIILHGCHK*GSRQQE
Trigger: CTCCTGTTGTCTCGAACCCAATTTATGACAACCGTG...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGTGAAAAGATGCCTTTaGCTTCCCAATCGTTCAACA +
Preference number: 5 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYVKRCL*LPNRST
Trigger: TGTTGAACGATTGGGAAGCAAAAGGCATCTTTTCAC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGGTTCTGTGATAGCTTaGCAATATGGTGGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYGSVIA*QYGGVL
Trigger: CAAAACTCCACCATATTGCAAAGCTATCACAGAACC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATAAAGGAGTCACTCAATaGCTCATTTTGCATACTGCC +
Preference number: 5 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYKGVTQ*LILHTA
Trigger: GGCAGTATGCAAAATGAGCAATTGAGTGACTCCTTT...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATCAACTTTTAAGGACTTaGACTGCTCTGAGTGAGATG +
Preference number: 5 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYQLLRT*TALSEM
Trigger: CATCTCACTCAGAGCAGTCAAAGTCCTTAAAAGTTG...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTATCTCAGGGAGGAATCTaGACTACCACAGAAAACCCA +
Preference number: 5 (lower is better)
Translates to: FKNAGYPKALCFPCHIILSQGGI*TTTENP
Trigger: TGGGTTTTCTGTGGTAGTCAAGATTCCTCCCTGAGA...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTCTCAGGGAGGAATCTaGACTACCACAGAAAACCCA +
Preference number: 5 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYSQGGI*TTTENP
Trigger: TGGGTTTTCTGTGGTAGTCAAGATTCCTCCCTGAGA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAAAAGGCATTGGTAGCTaGATGGGGATGGCACTGAAT +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKKGIGS*MGMALN
Trigger: ATTCAGTGCCATCCCCATCAAGCTACCAATGCCTTT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTCTTTTGGCTTAGGATaGACTTGGCGATATGGGCTC +
Preference number: 5 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYSFGLG*TWRYGL
Trigger: GAGCCCATATCGCCAAGTCAATCCTAAGCCAAAAGA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAACCTCTCCAGCACCTGTaGTCTCCTGACTTTTTAATG +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKPLQHL*SPDFLM
Trigger: CATTAAAAAGTCAGGAGACAACAGGTGCTGGAGAGG...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAGAGAATATGTGGTGTTaGGTTTCTTGTTCTTGCGAT +
Preference number: 5 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIENMWC*VSCSCD
Trigger: ATCGCAAGAACAAGAAACCAAACACCACATATTCTC...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAAGCTTTGTGTTTTCCTaGCCACATCATCTTAAAGCT +
Preference number: 5 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNISFVFS*PHHLKA
Trigger: AGCTTTAAGATGATGTGGCAAGGAAAACACAAAGCT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGATCGCCCTTCACATTaGTATCTAAAACGCATTCCC +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKDRPSH*YLKRIP
Trigger: GGGAATGCGTTTTAGATACAAATGTGAAGGGCGATC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATTCGAATACCCAAATTTaGGAAAAACAAAGGTCTGCG +
Preference number: 5 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYSNTQI*EKQRSA
Trigger: CGCAGACCTTTGTTTTTCCAAAATTTGGGTATTCGA...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAGAATGGTGGGATACCTaGCGAATTAGAAGGAAGTGT +
Preference number: 5 (lower is better)
Translates to: FKNAGYPKALCFPCHIILEWWDT*RIRRKC
Trigger: ACACTTCCTTCTAATTCGCAAGGTATCCCACCATTC...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATCATGCTCAGAAGTCTaGGATTATCAGTCTCTCCCA +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKSCSEV*DYQSLP
Trigger: TGGGAGAGACTGATAATCCAAGACTTCTGAGCATGA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGCTGTCTCAAGTCTCTaGGGTCTAACACTGAATTAC +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKAVSSL*GLTLNY
Trigger: GTAATTCAGTGTTAGACCCAAGAGACTTGAGACAGC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACACAAAAACAGTAGTATaGGAATTGGCGCCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYTKTVV*ELAPAD
Trigger: GTCAGCAGGCGCCAATTCCAATACTACTGTTTTTGT...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAACAAAAACAGTAGTATaGGAATTGGCGCCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: FKNAGYPKALCFPCHIILTKTVV*ELAPAD
Trigger: GTCAGCAGGCGCCAATTCCAATACTACTGTTTTTGT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTTCCTAGTAAGTATCTaGGGTGGCGTGGTAAATGGT +
Preference number: 5 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYFLVSI*GGVVNG
Trigger: ACCATTTACCACGCCACCCAAGATACTTACTAGGAA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATTCCTAGTAAGTATCTaGGGTGGCGTGGTAAATGGT +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKFLVSI*GGVVNG
Trigger: ACCATTTACCACGCCACCCAAGATACTTACTAGGAA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTCAGGGGTGCTGGAAATGTCCTAAACATGGTGGTGACATGGGTGTTAACATAAAAAGACTGACATCTTaGAGAGCAAGAGTTTTTGTC +
Preference number: 5 (lower is better)
Translates to: FQGCWKCPKHGGDMGVNIKRLTS*RARVFV
Trigger: GACAAAAACTCTTGCTCTCAAAGATGTCAGTCTTTT...TATGTTAACACCCATGTCACCACCATGTTTAGGACATTTCCAGCACCCCTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp GTTGACACTACTATTCTCAATAGAGCTGCTTTCAGTCTCAAAGGGCTGTGGTATGAGAATATGTGGTGTTaGGTTTCTTGTTCTTGCGAT +
Preference number: 5 (lower is better)
Translates to: VDTTILNRAAFSLKGLWYENMWC*VSCSCD
Trigger: ATCGCAAGAACAAGAAACCAAACACCACATATTCTC...ATACCACAGCCCTTTGAGACTGAAAGCAGCTCTATTGAGAATAGTAGTGTCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAGGTTACCCAAAAGCTTaGTGTTTTCCTTGCCACATC +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKGYPKA*CFPCHI
Trigger: GATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACC...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAGGTTACCCAAAAGCTTaGTGTTTTCCTTGCCACATC +
Preference number: 5 (lower is better)
Translates to: FKNAGYPKALCFPCHIILGYPKA*CFPCHI
Trigger: GATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACC...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS TCA 90 bp GGAAGAGCAGTCGTCAAATTACCATGTTCATCAGGGAGAAAAACTTaGAAACACAGTCTCACCACATTGAGGTCACAATCTTCAATATCA +
Preference number: 5 (lower is better)
Translates to: GRAVVKLPCSSGRKT*KHSLTTLRSQSSIS
Trigger: TGATATTGAAGATTGTGACCTCAATGTGGTGAGACTGTGTTTTCAAGTTTTTCTCCCTGATGAACATGGTAATTTGACGACTGCTCTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS TCA 90 bp TGTTTGATGGTCCCGACTCATTTATCATGCTGTTATCTGCACAACTaGAGTCAGATCCCTCAAATGCATCTGATTGTGAAACAAAAACAG +
Preference number: 5 (lower is better)
Translates to: CLMVPTHLSCCYLHN*SQIPQMHLIVKQKQ
Trigger: CTGTTTTTGTTTCACAATCAGATGCATTTGAGGGATCTGACTTCAGTTGTGCAGATAACAGCATGATAAATGAGTCGGGACCATCAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAACAAAGGTCTGCGTTCTaGTCCAAATTCTGCTTCATA +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKQRSAF*SKFCFI
Trigger: TATGAAGCAGAATTTGGACAAGAACGCAGACCTTTG...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACCAAAGGTCTGCGTTCTaGTCCAAATTCTGCTTCATA +
Preference number: 5 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYQRSAF*SKFCFI
Trigger: TATGAAGCAGAATTTGGACAAGAACGCAGACCTTTG...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTATGTTTTTCAGGGACATaGAATGGATTGATTCCTGCC +
Preference number: 5 (lower is better)
Translates to: FKNAGYPKALCFPCHIILCFSGT*NGLIPA
Trigger: GGCAGGAATCAATCCATTCAATGTCCCTGAAAAACA...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAACACAGTCTCACCACATaGAGGTCACAATCTTCAATA +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKHSLTT*RSQSSI
Trigger: TATTGAAGATTGTGACCTCAATGTGGTGAGACTGTG...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAAATCAGGGAGAAAAACTaGAAAACACAGTCTCACCAC +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKIREKN*KTQSHH
Trigger: GTGGTGAGACTGTGTTTTCAAGTTTTTCTCCCTGAT...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACATCAGGGAGAAAAACTaGAAAACACAGTCTCACCAC +
Preference number: 5 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYIREKN*KTQSHH
Trigger: GTGGTGAGACTGTGTTTTCAAGTTTTTCTCCCTGAT...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGTGAAAAGATGCCTTTaGCTTCCCAATCGTTCAACA +
Preference number: 5 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYVKRCL*LPNRST
Trigger: TGTTGAACGATTGGGAAGCAAAAGGCATCTTTTCAC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATCGCTATGTCCAAAGTaGTATGCTTCTTCCCTGAAA +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKSLCPK*YASSLK
Trigger: TTTCAGGGAAGAAGCATACAACTTTGGACATAGCGA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATTGCCATTTACTGAGTaGGAGAAGACTGAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKLPFTE*EKTEGE
Trigger: TTCTCCTTCAGTCTTCTCCAACTCAGTAAATGGCAA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAACAACTTTTAAGGACTTaGACTGCTCTGAGTGAGATG +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKQLLRT*TALSEM
Trigger: CATCTCACTCAGAGCAGTCAAAGTCCTTAAAAGTTG...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTCCCAATAGCTACAAATACTACTAATTTGCATATGTGTAGCATAGACGATGGTCACCACCAGTCATACTaGTTCCCACATGGAAAAACC +
Preference number: 5 (lower is better)
Translates to: FPIATNTTNLHMCSIDDGHHQSY*FPHGKT
Trigger: GGTTTTTCCATGTGGGAACAAGTATGACTGGTGGTG...ACCATCGTCTATGCTACACATATGCAAATTAGTAGTATTTGTAGCTATTGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR CAA 90 bp ATACCCAAATTTTGGAAACAAAGCATGAACGTGCTTCCAATTGCTCTGATAAAGCAAAGGTCTGCGTTCTaGTCCAAATTCTGCTTCATA +
Preference number: 5 (lower is better)
Translates to: IPKFWKQSMNVLPIALIKQRSAF*SKFCFI
Trigger: TATGAAGCAGAATTTGGACAAGAACGCAGACCTTTG...CTTTATCAGAGCAATTGGAAGCACGTTCATGCTTTGTTTCCAAAATTTGGGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR CAA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACGATATAACAAATTATTaGATGCCATTAGGCGGCCTG +
Preference number: 5 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYDITNY*MPLGGL
Trigger: CAGGCCGCCTAATGGCATCAAATAATTTGTTATATC...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAGATATAACAAATTATTaGATGCCATTAGGCGGCCTG +
Preference number: 5 (lower is better)
Translates to: FKNAGYPKALCFPCHIILDITNY*MPLGGL
Trigger: CAGGCCGCCTAATGGCATCAAATAATTTGTTATATC...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTACCCACTGTTAACTTaGTGCTTAACTAAACTCTGC +
Preference number: 5 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYYPLLT*CLTKLC
Trigger: GCAGAGTTTAGTTAAGCACAAAGTTAACAGTGGGTA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAAGCTTTGTGTTTTCCTaGCCACATCATCTTAAAGCT +
Preference number: 5 (lower is better)
Translates to: FKNAGYPKALCFPCHIILSFVFS*PHHLKA
Trigger: AGCTTTAAGATGATGTGGCAAGGAAAACACAAAGCT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS TCA 90 bp TGGAAAGGAGTCACTCAATTGCTCATTTTGCATACTGCCAATACCTaGATACTGACTATCTTGAACAAAACCATGACTGTTTGGATTAGT +
Preference number: 5 (lower is better)
Translates to: WKGVTQLLILHTANT*ILTILNKTMTVWIS
Trigger: ACTAATCCAAACAGTCATGGTTTTGTTCAAGATAGTCAGTATTCAGGTATTGGCAGTATGCAAAATGAGCAATTGAGTGACTCCTTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp CCTATCATCCATCATCATCTAGAGACATCCTGGGTTCACATTTTGAACAGAAAATTAATTCTGCAGTATTaGGAGCACGGTTGTCATAAA +
Preference number: 5 (lower is better)
Translates to: PIIHHHLETSWVHILNRKLILQY*EHGCHK
Trigger: TTTATGACAACCGTGCTCCAAATACTGCAGAATTAA...TTTTCTGTTCAAAATGTGAACCCAGGATGTCTCTAGATGATGATGGATGATAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAAATTCTACCATCATTTaGCCACTGGGATTATTTTCC +
Preference number: 5 (lower is better)
Translates to: FKNAGYPKALCFPCHIILNSTII*PLGLFS
Trigger: GGAAAATAATCCCAGTGGCAAAATGATGGTAGAATT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTAATGACAGACTGTTTCTaGCTAGGAAGATATTCAACA +
Preference number: 5 (lower is better)
Translates to: FKNAGYPKALCFPCHIILMTDCF*LGRYST
Trigger: TGTTGAATATCTTCCTAGCAAGAAACAGTCTGTCAT...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTACTACATGTGTTATCCTaGCAAAGAAAAAGACTGACA +
Preference number: 5 (lower is better)
Translates to: FKNAGYPKALCFPCHIILLHVLS*QRKRLT
Trigger: TGTCAGTCTTTTTCTTTGCAAGGATAACACATGTAG...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TCTGTAAATTACCTTGGGCAGTATGGCCATTTTCACGATATTGATTCTTCCTACTGTCAGATAAGTAGGTaGCGAAAATTTTCTCCCATT +
Preference number: 5 (lower is better)
Translates to: SVNYLGQYGHFHDIDSSYCQISR*RKFSPI
Trigger: AATGGGAGAAAATTTTCGCAACCTACTTATCTGACA...GTAGGAAGAATCAATATCGTGAAAATGGCCATACTGCCCAAGGTAATTTACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TTTAAGAACGCTGGTTACCCAAAAGCTTTGTGTTTTCCTTGCCACATCATCTTATGTCAGATAAGTAGGTaGCGAAAATTTTCTCCCATT +
Preference number: 5 (lower is better)
Translates to: FKNAGYPKALCFPCHIILCQISR*RKFSPI
Trigger: AATGGGAGAAAATTTTCGCAACCTACTTATCTGACA...TAAGATGATGTGGCAAGGAAAACACAAAGCTTTTGGGTAACCAGCGTTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS-3UTR CAA 90 bp TCCACAGAGATTTGCTTTTTGAGCCCTGAATTCACTGTTATTAGCAGTAGAATAACAGAGATTTGCTTTTaGAGCCCTGAATTCACTGTT +
Preference number: 5 (lower is better)
Translates to: STEICFLSPEFTVISSRITEICF*SPEFTV
Trigger: AACAGTGAATTCAGGGCTCAAAAAGCAAATCTCTGT...TATTCTACTGCTAATAACAGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS-3UTR CAA 90 bp TCCACAGAGATTTGCTTTTTGAGCCCTGAATTCACTGTTATTAGCAGTAGAATATCGAATACCCAAATTTaGGAAACAAAGCATGAACGT +
Preference number: 5 (lower is better)
Translates to: STEICFLSPEFTVISSRISNTQI*ETKHER
Trigger: ACGTTCATGCTTTGTTTCCAAAATTTGGGTATTCGA...TATTCTACTGCTAATAACAGTGAATTCAGGGCTCAAAAAGCAAATCTCTGTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642725.1
CDS CAA 90 bp CCCTCCGCTGGGTTTGCGGCTCACACCTTCCCAACCCCTGAATTCTaGCACCCCGGGTCACCCAGCGTCGCCGTCCACCGTACGGGAGCC +
Preference number: 6 (lower is better)
Translates to: PSAGFAAHTFPTPEF*HPGSPSVAVHRTGA
Trigger: GGCTCCCGTACGGTGGACGGCGACGCTGGGTGACCCGGGGTGCAAGAATTCAGGGGTTGGGAAGGTGTGAGCCGCAAACCCAGCGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS TCA 72 bp CTCCGCTGGGTTTGCGGCTCACACCTTCCCAACCCCTaGATTCTTGCACCCCGGGTCACCCAGCGTCGCCGT +
Preference number: 6 (lower is better)
Translates to: LRWVCGSHLPNP*ILAPRVTQRRR
Trigger: ACGGCGACGCTGGGTGACCCGGGGTGCAAGAATTCAGGGGTTGGGAAGGTGTGAGCCGCAAACCCAGCGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS CAA 90 bp TGGGGTGGGCCACTGATGACCAGCTTGAAGAAGGCAGAGGTGCCATaGAGGCATGATGTGACAATCCACTTGAGATGGGCCCAGGTGAGG +
Preference number: 6 (lower is better)
Translates to: WGGPLMTSLKKAEVP*RHDVTIHLRWAQVR
Trigger: CCTCACCTGGGCCCATCTCAAGTGGATTGTCACATCATGCCTCAATGGCACCTCTGCCTTCTTCAAGCTGGTCATCAGTGGCCCACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS GCA 72 bp TGGATAGAAGGGTATGTTCGGTTGTTGTCTGTGCTGTaGTCCCCTGGAATGCTGCCTGCTGATCGCCCTTCA +
Preference number: 6 (lower is better)
Translates to: WIEGYVRLLSVL*SPGMLPADRPS
Trigger: TGAAGGGCGATCAGCAGGCAGCATTCCAGGGGAGCACAGCACAGACAACAACCGAACATACCCTTCTATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS TCA 72 bp GTTGTCTGTGCTGTGCTCCCCTGGAATGCTGCCTGCTaGTCGCCCTTCACATTTGTATCTAAAACGCATTCC +
Preference number: 6 (lower is better)
Translates to: VVCAVLPWNAAC*SPFTFVSKTHS
Trigger: GGAATGCGTTTTAGATACAAATGTGAAGGGCGATCAGCAGGCAGCATTCCAGGGGAGCACAGCACAGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS CCA 72 bp GTGCCATTGAGGCATGATGTGACAATCCACTTGAGATaGGCCCAGGTGAGGGATAGTAGGATTCTGCTTGAC +
Preference number: 6 (lower is better)
Translates to: VPLRHDVTIHLR*AQVRDSRILLD
Trigger: GTCAAGCAGAATCCTACTATCCCTCACCTGGGCCCATCTCAAGTGGATTGTCACATCATGCCTCAATGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS CAA 72 bp TACATGAGGGGTTTTCAAGATTCATGCTCAGAAGTCTaGGATTATCAGTCTCTCCCATGCTGTCACTGCTGG +
Preference number: 6 (lower is better)
Translates to: YMRGFQDSCSEV*DYQSLPCCHCW
Trigger: CCAGCAGTGACAGCATGGGAGAGACTGATAATCCAAGACTTCTGAGCATGAATCTTGAAAACCCCTCATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS GCA 72 bp GATTCACTAACTTCCTGGTCAGAAGGTCTCCGCAACTaGATTTTTACTGTTACGGGTTCTGTGATAGCTTTG +
Preference number: 6 (lower is better)
Translates to: DSLTSWSEGLRN*IFTVTGSVIAL
Trigger: CAAAGCTATCACAGAACCCGTAACAGTAAAAATGCAGTTGCGGAGACCTTCTGACCAGGAAGTTAGTGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS CAA 72 bp TTAATTCTGCAGTATTTGGAGCACGGTTGTCATAAATaGGGTTCGAGACAACAGGAGGAAGAGCAGTCGTCA +
Preference number: 6 (lower is better)
Translates to: LILQYLEHGCHK*GSRQQEEEQSS
Trigger: TGACGACTGCTCTTCCTCCTGTTGTCTCGAACCCAATTTATGACAACCGTGCTCCAAATACTGCAGAATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS CAA 90 bp ACACTGAATTACATGAGGGGTTTTCAAGATTCATGCTCAGAAGTCTaGGATTATCAGTCTCTCCCATGCTGTCACTGCTGGTTGTCATCA +
Preference number: 6 (lower is better)
Translates to: TLNYMRGFQDSCSEV*DYQSLPCCHCWLSS
Trigger: TGATGACAACCAGCAGTGACAGCATGGGAGAGACTGATAATCCAAGACTTCTGAGCATGAATCTTGAAAACCCCTCATGTAATTCAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS GCA 72 bp CGCCCTTCACATTTGTATCTAAAACGCATTCCCCTCTaGCTGGGTTGTTCAATTATCTCTATATACGGGTTA +
Preference number: 6 (lower is better)
Translates to: RPSHLYLKRIPL*LGCSIISIYGL
Trigger: TAACCCGTATATAGAGATAATTGAACAACCCAGGCAGAGGGGAATGCGTTTTAGATACAAATGTGAAGGGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS GCA 72 bp TTGGAAAAACAAAGGTCTGCGTTCTTGTCCAAATTCTaGTTCATAGTAGCCGTCTCTGCAGTCTTTTCCAAC +
Preference number: 6 (lower is better)
Translates to: LEKQRSAFLSKF*FIVAVSAVFSN
Trigger: GTTGGAAAAGACTGCAGAGACGGCTACTATGAAGCAGAATTTGGACAAGAACGCAGACCTTTGTTTTTCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS TCA 72 bp GTCCCGACTCATTTATCATGCTGTTATCTGCACAACTaGAGTCAGATCCCTCAAATGCATCTGATTGTGAAA +
Preference number: 6 (lower is better)
Translates to: VPTHLSCCYLHN*SQIPQMHLIVK
Trigger: TTTCACAATCAGATGCATTTGAGGGATCTGACTTCAGTTGTGCAGATAACAGCATGATAAATGAGTCGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS GCA 72 bp GTTCTTGTCCAAATTCTGCTTCATAGTAGCCGTCTCTaGAGTCTTTTCCAACTAAATCATGAGGATGAGGTT +
Preference number: 6 (lower is better)
Translates to: VLVQILLHSSRL*SLFQLNHEDEV
Trigger: AACCTCATCCTCATGATTTAGTTGGAAAAGACTGCAGAGACGGCTACTATGAAGCAGAATTTGGACAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295025.12
ENST00000394479.4
ENST00000642725.1
CDS CAA 72 bp TCAAATGCATCTGATTGTGAAACAAAAACAGTAGTATaGGAATTGGCGCCTGCTGACATACTGGAAGAGGAC +
Preference number: 6 (lower is better)
Translates to: SNASDCETKTVV*ELAPADILEED
Trigger: GTCCTCTTCCAGTATGTCAGCAGGCGCCAATTCCAATACTACTGTTTTTGTTTCACAATCAGATGCATTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS CAA 90 bp AGGAAGAGCAGTCGTCAAATTACCATGTTCATCAGGGAGAAAAACTaGAAAACACAGTCTCACCACATTGAGGTCACAATCTTCAATATC +
Preference number: 6 (lower is better)
Translates to: RKSSRQITMFIREKN*KTQSHHIEVTIFNI
Trigger: GATATTGAAGATTGTGACCTCAATGTGGTGAGACTGTGTTTTCAAGTTTTTCTCCCTGATGAACATGGTAATTTGACGACTGCTCTTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS CCA 72 bp GGCAGATATCTAAAATCCATAGATTCACTAACTTCCTaGTCAGAAGGTCTCCGCAACTGCATTTTTACTGTT +
Preference number: 6 (lower is better)
Translates to: GRYLKSIDSLTS*SEGLRNCIFTV
Trigger: AACAGTAAAAATGCAGTTGCGGAGACCTTCTGACCAGGAAGTTAGTGAATCTATGGATTTTAGATATCTGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4
CDS CAA 72 bp AATACCCAAATTTTGGAAAAACAAAGGTCTGCGTTCTaGTCCAAATTCTGCTTCATAGTAGCCGTCTCTGCA +
Preference number: 6 (lower is better)
Translates to: NTQILEKQRSAF*SKFCFIVAVSA
Trigger: TGCAGAGACGGCTACTATGAAGCAGAATTTGGACAAGAACGCAGACCTTTGTTTTTCCAAAATTTGGGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000295025.12
ENST00000394479.4