Pregenerated sensors for REG1B (Homo sapiens)
Ensembl gene IDs: ENSG00000172023Ensembl transcript IDs: ENST00000305089.8, ENST00000454188.5, ENST00000476554.1, ENST00000479258.5
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | AGGGCTCTAGAGACTGAGACAGGTGAAGGTACTGAAGATCAGCGATGCAAACTCTTAGGCAGCTCTGTCTaGGACTCCTGGCCTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: RALETETGEGTEDQRCKLLGSSV*DSWPWL Trigger: GAGCCAAGGCCAGGAGTCCCAGACAGAGCTGCCTAA...GAGTTTGCATCGCTGATCTTCAGTACCTTCACCTGTCTCAGTCTCTAGAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305089.8 |
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| CDS-3UTR CCA 90 bp | AGACAGGTGAAGGTACTGAAGATCAGCGATGCAAACTCATTAGGGAGGAGATGGTCTGTCTGGGACTCCTaGCCTTGGCTCAGAGACAGG | + |
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Preference number: 4 (lower is better) Translates to: RQVKVLKISDANSLGRRWSVWDS*PWLRDR Trigger: CCTGTCTCTGAGCCAAGGCCAGGAGTCCCAGACAGA...CCATCTCCTCCCTAATGAGTTTGCATCGCTGATCTTCAGTACCTTCACCTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305089.8 |
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| CDS-3UTR CCA 90 bp | TTCAGGGCTCTAGAGACTGAGACAGGTGAAGGTACTGAAGATCAGCGATGCAAATGGGACTCCTGGCCTTaGCTCAGAGACAGGAACATC | + |
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Preference number: 4 (lower is better) Translates to: FRALETETGEGTEDQRCKWDSWP*LRDRNI Trigger: GATGTTCCTGTCTCTGAGCCAAGGCCAGGAGTCCCA...TTTGCATCGCTGATCTTCAGTACCTTCACCTGTCTCAGTCTCTAGAGCCCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305089.8 |
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| CDS-3UTR TCA 90 bp | GCAAACTCATTAGGGAGGAGATGGTCTGAACTGAGTTGGAGACATAGTCTAGTTAAGAACGAGTTGGTCTaGGCCATGCTTAGCGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: ANSLGRRWSELSWRHSLVKNELV*AMLSGS Trigger: ACTGCCGCTAAGCATGGCTCAGACCAACTCGTTCTT...AACTAGACTATGTCTCCAACTCAGTTCAGACCATCTCCTCCCTAATGAGTTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305089.8 |
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| CDS-3UTR CCA 90 bp | ACTGAGACAGGTGAAGGTACTGAAGATCAGCGATGCAAACTCATTAGGGAGGAGGGAAATGGCAACAGGTaGATAGATTGTCTGCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: TETGEGTEDQRCKLIREEGNGNR*IDCLPL Trigger: GAGAGGCAGACAATCTATCCACCTGTTGCCATTTCC...CTCCTCCCTAATGAGTTTGCATCGCTGATCTTCAGTACCTTCACCTGTCTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454188.5 |
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| CDS-3UTR GCA 90 bp | GATGCAAACTCATTAGGGAGGAGATGGTCTGAACTGAGTTGGAGACATAGTCTACTGGCAATAGAGATCTaGATCAACCCAGGTCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: DANSLGRRWSELSWRHSLLAIEI*INPGLR Trigger: CCTGAGACCTGGGTTGATGCAGATCTCTATTGCCAG...TAGACTATGTCTCCAACTCAGTTCAGACCATCTCCTCCCTAATGAGTTTGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305089.8 ENST00000454188.5 |
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| CDS-3UTR GCA 90 bp | GAGACAGGTGAAGGTACTGAAGATCAGCGATGCAAACTCATTAGGGAGGAGATGACTGAAGATCAGCGATaGAAACTCATTAGGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: ETGEGTEDQRCKLIREEMTEDQR*KLIREE Trigger: CTCCTCCCTAATGAGTTTGCATCGCTGATCTTCAGT...CATCTCCTCCCTAATGAGTTTGCATCGCTGATCTTCAGTACCTTCACCTGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305089.8 ENST00000454188.5 |
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| CDS-3UTR GCA 90 bp | TTTTTCAGGGCTCTAGAGACTGAGACAGGTGAAGGTACTGAAGATCAGCGATGCACTGAAGATCAGCGATaGAAACTCATTAGGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FFRALETETGEGTEDQRCTEDQR*KLIREE Trigger: CTCCTCCCTAATGAGTTTGCATCGCTGATCTTCAGT...GCATCGCTGATCTTCAGTACCTTCACCTGTCTCAGTCTCTAGAGCCCTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000305089.8 ENST00000454188.5 |
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| CDS-3UTR CCA 90 bp | GTGAAGGTACTGAAGATCAGCGATGCAAACTCATTAGGGAGGAGATGGTCTGAAATCCCCAGAGATAAGTaGGAAGGAAATGGCAACAGG | + |
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Preference number: 4 (lower is better) Translates to: VKVLKISDANSLGRRWSEIPRDK*EGNGNR Trigger: CCTGTTGCCATTTCCTTCCCACTTATCTCTGGGGAT...TTCAGACCATCTCCTCCCTAATGAGTTTGCATCGCTGATCTTCAGTACCTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454188.5 |
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| CDS-3UTR TCA 90 bp | ACAGGTGAAGGTACTGAAGATCAGCGATGCAAACTCATTAGGGAGGAGATGGTCCATCCTTCCATTTCTTaGATCCTTTCCTCTATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGEGTEDQRCKLIREEMVHPSIS*ILSSIP Trigger: TGGGATAGAGGAAAGGATTCAAGAAATGGAAGGATG...GACCATCTCCTCCCTAATGAGTTTGCATCGCTGATCTTCAGTACCTTCACCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454188.5 |
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| CDS-3UTR GCA 90 bp | GCAAACTCATTAGGGAGGAGATGGTCTGAACTGAGTTGGAGACATAGTCTAGTTATCTCTGTTGGTAAGTaGCTTGTCCACTTGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ANSLGRRWSELSWRHSLVISVGK*LVHLRW Trigger: CCACCTCAAGTGGACAAGGCACTTACCAACAGAGAT...AACTAGACTATGTCTCCAACTCAGTTCAGACCATCTCCTCCCTAATGAGTTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305089.8 |
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| CDS-3UTR CCA 90 bp | AAGGTACTGAAGATCAGCGATGCAAACTCATTAGGGAGGAGATGGTCTGAACTGTCATTAGGGAGGAGATaGTCTGAACTGAGTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KVLKISDANSLGRRWSELSLGRR*SELSWR Trigger: TCTCCAACTCAGTTCAGACCATCTCCTCCCTAATGA...CAGTTCAGACCATCTCCTCCCTAATGAGTTTGCATCGCTGATCTTCAGTACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305089.8 ENST00000454188.5 |
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| CDS-3UTR CCA 90 bp | GCTCTAGAGACTGAGACAGGTGAAGGTACTGAAGATCAGCGATGCAAACTCATTTCATTAGGGAGGAGATaGTCTGAACTGAGTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: ALETETGEGTEDQRCKLISLGRR*SELSWR Trigger: TCTCCAACTCAGTTCAGACCATCTCCTCCCTAATGA...AATGAGTTTGCATCGCTGATCTTCAGTACCTTCACCTGTCTCAGTCTCTAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305089.8 ENST00000454188.5 |
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| CDS-3UTR TCA 90 bp | TTATTTTTCAGGGCTCTAGAGACTGAGACAGGTGAAGGTACTGAAGATCAGCGACATCCTTCCATTTCTTaGATCCTGAGCATGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: LFFRALETETGEGTEDQRHPSIS*ILSMKS Trigger: TGACTTCATGCTCAGGATTCAAGAAATGGAAGGATG...TCGCTGATCTTCAGTACCTTCACCTGTCTCAGTCTCTAGAGCCCTGAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305089.8 |
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| CDS-3UTR CAA 90 bp | GCAAACTCATTAGGGAGGAGATGGTCTGAACTGAGTTGGAGACATAGTCTAGTTCTGGGACTCCTGGCCTaGGCTCAGAGACAGGAACAT | + |
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Preference number: 5 (lower is better) Translates to: ANSLGRRWSELSWRHSLVLGLLA*AQRQEH Trigger: ATGTTCCTGTCTCTGAGCCAAGGCCAGGAGTCCCAG...AACTAGACTATGTCTCCAACTCAGTTCAGACCATCTCCTCCCTAATGAGTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305089.8 |
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| CDS GCA 90 bp | TTTGGGACCAGTGGTGGAATAGGGAAGGGATCAATCTTATCTCATTaGAGCCACAGAACACACTGCAAATTAGCAGCTGCCTCTACCTTC | + |
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Preference number: 5 (lower is better) Translates to: FGTSGGIGKGSILSH*SHRTHCKLAAASTF Trigger: GAAGGTAGAGGCAGCTGCTAATTTGCAGTGTGTTCTGTGGCTGCAATGAGATAAGATTGATCCCTTCCCTATTCCACCACTGGTCCCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476554.1 |
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| CDS-3UTR CAA 90 bp | GAGACTGAGACAGGTGAAGGTACTGAAGATCAGCGATGCAAACTCATTAGGGAGTCATCCTTCCATTTCTaGAATCCTGAGCATGAAGTC | + |
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Preference number: 5 (lower is better) Translates to: ETETGEGTEDQRCKLIRESSFHF*NPEHEV Trigger: GACTTCATGCTCAGGATTCAAGAAATGGAAGGATGA...CTCCCTAATGAGTTTGCATCGCTGATCTTCAGTACCTTCACCTGTCTCAGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305089.8 |
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| CDS-3UTR CAA 90 bp | CTGAGACAGGTGAAGGTACTGAAGATCAGCGATGCAAACTCATTAGGGAGGAGATCATCCTTCCATTTCTaGAATCCTTTCCTCTATCCC | + |
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Preference number: 5 (lower is better) Translates to: LRQVKVLKISDANSLGRRSSFHF*NPFLYP Trigger: GGGATAGAGGAAAGGATTCAAGAAATGGAAGGATGA...TCTCCTCCCTAATGAGTTTGCATCGCTGATCTTCAGTACCTTCACCTGTCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454188.5 |
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| CDS CAA 90 bp | GTTTGGGACCAGTGGTGGAATAGGGAAGGGATCAATCTTATCTCATaGCAGCCACAGAACACACTGCAAATTAGCAGCTGCCTCTACCTT | + |
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Preference number: 6 (lower is better) Translates to: VWDQWWNREGINLIS*QPQNTLQISSCLYL Trigger: AAGGTAGAGGCAGCTGCTAATTTGCAGTGTGTTCTGTGGCTGCAATGAGATAAGATTGATCCCTTCCCTATTCCACCACTGGTCCCAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476554.1 |
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| CDS GCA 72 bp | AAAGATGCATTTCTAGAAGTAGACACAATGAGTGGGTaGATGAATTCCCAGAGCCCAGAAAATTCAGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: KDAFLEVDTMSG*MNSQSPENSAF Trigger: GAAGGCTGAATTTTCTGGGCTCTGGGAATTCATGCACCCACTCATTGTGTCTACTTCTAGAAATGCATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000476554.1 ENST00000479258.5 |
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