RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for REEP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000132563

Ensembl transcript IDs: ENST00000254901.9, ENST00000378339.7, ENST00000503379.5, ENST00000504163.1, ENST00000506158.5, ENST00000507511.5, ENST00000507635.5, ENST00000510467.5, ENST00000613650.1

Found 418 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCAGGGCTGGGTCGGAGGCGGCCGTCAGGCCTCTGCAGGGGCAGTaGGTCCTCGTCCCGGATCAGGGTCAGGTCCTGCATGCTGAAGCT +
Preference number: 1 (lower is better)
Translates to: ARAGSEAAVRPLQGQ*VLVPDQGQVLHAEA
Trigger: AGCTTCAGCATGCAGGACCTGACCCTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCGCCTCCGACCCAGCCCTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
3UTR GCA 90 bp CTCTGCAGGGGCAGTGCGTCCTCGTCCCGGATCAGGGTCAGGTCCTaGATGCTGAAGCTGCGGAGCTTCTCTGACAGCACCCCCTGGCCC +
Preference number: 1 (lower is better)
Translates to: LCRGSASSSRIRVRS*MLKLRSFSDSTPWP
Trigger: GGGCCAGGGGGTGCTGTCAGAGAAGCTCCGCAGCTTCAGCATGCAGGACCTGACCCTGATCCGGGACGAGGACGCACTGCCCCTGCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507511.5
3UTR CCA 90 bp CTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGAGCAGAGGCTaGGTTCTGCCAGGGGTCTTAGGGCCCAGTCTGCTTGGTACAGGA +
Preference number: 1 (lower is better)
Translates to: LTEAVAEAGAGVSRG*VLPGVLGPSLLGTG
Trigger: TCCTGTACCAAGCAGACTGGGCCCTAAGACCCCTGGCAGAACCCAGCCTCTGCTCACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR TCA 90 bp GTGGGGCTCAGGGTGGGAGGAGGCGACTGCTGGAGGGACAGTCCTTaGCCCAAACTACCCCGAGCCCTAGACCCAGAAAGACACACTCAC +
Preference number: 1 (lower is better)
Translates to: VGLRVGGGDCWRDSP*PKLPRALDPERHTH
Trigger: GTGAGTGTGTCTTTCTGGGTCTAGGGCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCAGCAGTCGCCTCCTCCCACCCTGAGCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR CCA 90 bp GTGGAGGGGCTCAAGCTGAGTCGCCCCCGCCAGAGGTCTTCTTCTTaGGCCGGGTCTTCAGTGTCTTGGAAGCCAGTGGCTCAGCTTTGG +
Preference number: 1 (lower is better)
Translates to: VEGLKLSRPRQRSSS*AGSSVSWKPVAQLW
Trigger: CCAAAGCTGAGCCACTGGCTTCCAAGACACTGAAGACCCGGCCCAAGAAGAAGACCTCTGGCGGGGGCGACTCAGCTTGAGCCCCTCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613650.1
3UTR GCA 90 bp TTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTaGTCCCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCTG +
Preference number: 1 (lower is better)
Translates to: FRPVLGPSGLGLPPP*SQTKASSGNTTGPL
Trigger: CAGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR TCA 90 bp TCCTGCATTTCTCTTTCTCCTTCACGTGTTCCTCCTGGCCCTGACTaGAGCCGTGGCAGAAGCTGGGGCGGGTGTGAGCAGAGGCTGGGT +
Preference number: 1 (lower is better)
Translates to: SCISLSPSRVPPGPD*SRGRSWGGCEQRLG
Trigger: ACCCAGCCTCTGCTCACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAACACGTGAAGGAGAAAGAGAAATGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR CCA 90 bp GTGCCAGAGTTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATaGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTGCA +
Preference number: 1 (lower is better)
Translates to: VPEFGLLAHPVPKVQ*APSSQGTGSPAAPA
Trigger: TGCAGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTGGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp GTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTGGGGCAGGGCGGGGCTaGAGCGGAACAGCGGTGGAG +
Preference number: 2 (lower is better)
Translates to: VPKVQWAPSSQGTGSPAAGAGRG*SGTAVE
Trigger: CTCCACCGCTGTTCCGCTGCAGCCCCGCCCTGCCCC...AGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR TCA 90 bp GGGTGGGCCCTGAGGAGCACGGGAGTCCAGCCCAGGGGCACGGTGGCAATGGGGTGGAGGGACAGTCCTTaGCCCAAACTACCCCGAGCC +
Preference number: 2 (lower is better)
Translates to: GWALRSTGVQPRGTVAMGWRDSP*PKLPRA
Trigger: GGCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCA...CCCCATTGCCACCGTGCCCCTGGGCTGGACTCCCGTGCTCCTCAGGGCCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp GGAGGCGGCCGTCAGGCCTCTGCAGGGGCAGTGCGTCCTCGTCCCGGATCAGGGGGCGGCAGCTGTGACTaGAGCATTGGCGGCAAGGTT +
Preference number: 2 (lower is better)
Translates to: GGGRQASAGAVRPRPGSGGGSCD*SIGGKV
Trigger: AACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCC...CCCTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507511.5
3UTR-3UTR GCA 90 bp CAGGGCGGGGCTGCAGCGGAACAGCGGTGGAGGCCGAGCAGTCCCCACCTCCTTCTGAGGCTTCATCCTTaGTCTGCAGCCTGCGGGGGT +
Preference number: 2 (lower is better)
Translates to: QGGAAAEQRWRPSSPHLLLRLHP*SAACGG
Trigger: ACCCCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAG...AAGGAGGTGGGGACTGCTCGGCCTCCACCGCTGTTCCGCTGCAGCCCCGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp CCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTCCGGAAATGGCCATCTaGGGGGCCCAGGGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: PKVQWAPSSQGTGSPAAPPEMAI*GAQGPE
Trigger: CTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGG...AGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR TCA 90 bp CCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGCCTCCTGGCCCTGACTaGAGCCGTGGCAGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: PVPKVQWAPSSQGTGSPAPPGPD*SRGRSW
Trigger: CCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGG...CGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp CGGCCGTCAGGCCTCTGCAGGGGCAGTGCGTCCTCGTCCCGGATCAGGGTCAGGTTGGGTGCACGAACTTaGGGTAGAGCACGCTGGAGC +
Preference number: 2 (lower is better)
Translates to: RPSGLCRGSASSSRIRVRLGART*GRARWS
Trigger: GCTCCAGCGTGCTCTACCGCAAGTTCGTGCACCCAA...CCTGACCCTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
3UTR-3UTR CCA 90 bp TTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGAGCAGAGGCAGGCACCGGAAATaGCCATCTGCGGGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: FLLALTEAVAEAGAGVSRGRHRK*PSAGPR
Trigger: CCTGGGCCCCGCAGATGGCCATTTCCGGTGCCTGCC...TCTGCTCACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp TCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGCAGCGGAACAGCGGTaGAGGCCGAGCAGTCCCCAC +
Preference number: 2 (lower is better)
Translates to: SSAKGPMGTLFPRNREPRAAEQR*RPSSPH
Trigger: GTGGGGACTGCTCGGCCTCCACCGCTGTTCCGCTGC...GCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp CCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTTCATCCTTGCTCTaGAGCCTGCGGGGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: PVPKVQWAPSSQGTGSPAASSLL*SLRGWR
Trigger: CCTCCACCCCCGCAGGCTGCAGAGCAAGGATGAAGC...CGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp CACGTGTTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGGGACTTCCCCCTCCCTaGTCCCAAACCAAGGCGAGC +
Preference number: 2 (lower is better)
Translates to: HVFLLALTEAVAEAGAGVGLPPP*SQTKAS
Trigger: GCTCGCCTTGGTTTGGGAGCAGGGAGGGGGAAGTCC...CACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAACACGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp CGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAAGGCGCAGCGGAACAGCGGTaGAGGCCGAGCAGTCCCCAC +
Preference number: 2 (lower is better)
Translates to: RPWSIWARTSPSLLPNQGAAEQR*RPSSPH
Trigger: GTGGGGACTGCTCGGCCTCCACCGCTGTTCCGCTGC...GCCTTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp CCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAAGGCAGCGGAACAGCGGTaGAGGCCGAGCAGTCCCCAC +
Preference number: 2 (lower is better)
Translates to: PVLGPSGLGLPPPCSQTKAAEQR*RPSSPH
Trigger: GTGGGGACTGCTCGGCCTCCACCGCTGTTCCGCTGC...CTTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp GGGTGGGCCCTGAGGAGCACGGGAGTCCAGCCCAGGGGCACGGTGGCAATGGGGAACCAAGGCGAGCAGTaGAAACACGACAGGACCTCT +
Preference number: 2 (lower is better)
Translates to: GWALRSTGVQPRGTVAMGNQGEQ*KHDRTS
Trigger: AGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTT...CCCCATTGCCACCGTGCCCCTGGGCTGGACTCCCGTGCTCCTCAGGGCCCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp GGAGGCGGCCGTCAGGCCTCTGCAGGGGCAGTGCGTCCTCGTCCCGGATCAGGGTCTCCTTCTCCTTGTTaGACAGCGTTGGGTGCACGA +
Preference number: 2 (lower is better)
Translates to: GGGRQASAGAVRPRPGSGSPSPC*TALGAR
Trigger: TCGTGCACCCAACGCTGTCCAACAAGGAGAAGGAGA...CCCTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
3UTR CAA 90 bp TCTGACAGCACCCCCTGGCCCTTGGCGGCAGCTGTGACTGCAGCATaGGCGGCAAGGTTCAGGCCCCTCTTGCCCACCCTCATCATGGTC +
Preference number: 2 (lower is better)
Translates to: SDSTPWPLAAAVTAA*AARFRPLLPTLIMV
Trigger: GACCATGATGAGGGTGGGCAAGAGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCCAAGGGCCAGGGGGTGCTGTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507511.5
3UTR-3UTR TCA 90 bp GGGAGGAGGCGACTGCTGGAGGGACAGTCCTTGACCCAAACTACCCCGAGCCCTGGCCATCCTGGTCGCTaGAGCACAGGCCAATCCCTG +
Preference number: 2 (lower is better)
Translates to: GRRRLLEGQSLTQTTPSPGHPGR*STGQSL
Trigger: CAGGGATTGGCCTGTGCTTCAGCGACCAGGATGGCC...AGGGCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCAGCAGTCGCCTCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp CTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAGCTTCATCCTTGCTCTaGAGCCTGCGGGGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: LQARPWSIWARTSPSLLPASSLL*SLRGWR
Trigger: CCTCCACCCCCGCAGGCTGCAGAGCAAGGATGAAGC...TGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp CCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTTCCCTTTCCCCCATGTaGCTTCAGGCCCGTCCTTGG +
Preference number: 2 (lower is better)
Translates to: PKVQWAPSSQGTGSPAAPSLSPM*LQARPW
Trigger: CCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGA...AGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp CCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTAACGTCCTCCCCGTGTaGTCCCTTTCCCCCATGTGC +
Preference number: 2 (lower is better)
Translates to: PKVQWAPSSQGTGSPAAPNVLPV*SLSPMC
Trigger: GCACATGGGGGAAAGGGAGCACACGGGGAGGACGTT...AGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp CCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTTCTTCCATCCACAGCTaGACCTGGAGGCCCCACCCA +
Preference number: 2 (lower is better)
Translates to: PKVQWAPSSQGTGSPAAPSSIHS*TWRPHP
Trigger: TGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGA...AGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp GTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCAGAAGAGTGGCCACTaGGCAGGCACCGGAAATGGC +
Preference number: 2 (lower is better)
Translates to: VPKVQWAPSSQGTGSPAAQKSGH*AGTGNG
Trigger: GCCATTTCCGGTGCCTGCCCAGTGGCCACTCTTCTG...AGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp CACGTGTTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGGGGGCACGGTGGCAATaGGGTGACCTAAAAGGGAGC +
Preference number: 2 (lower is better)
Translates to: HVFLLALTEAVAEAGAGVGARWQ*GDLKGS
Trigger: GCTCCCTTTTAGGTCACCCCATTGCCACCGTGCCCC...CACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAACACGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp TCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCACAGGATGGGGACCCTaGGCAAGAGGGGATGGACCC +
Preference number: 2 (lower is better)
Translates to: SSAKGPMGTLFPRNREPRTGWGP*ARGDGP
Trigger: GGGTCCATCCCCTCTTGCCCAGGGTCCCCATCCTGT...GCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp CCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGAGGGCCCAGTCTGCTTaGTACAGGATGGGGACCCTG +
Preference number: 2 (lower is better)
Translates to: PVPKVQWAPSSQGTGSPARAQSA*YRMGTL
Trigger: CAGGGTCCCCATCCTGTACCAAGCAGACTGGGCCCT...CGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR TCA 90 bp CTGGCCCTTGGCGGCAGCTGTGACTGCAGCATTGGCGGCAAGGTTCAGGCCCCTTGTCTCGGGCCTGCGTaGTGTACTCGTCGATCTCCT +
Preference number: 2 (lower is better)
Translates to: LALGGSCDCSIGGKVQAPCLGPA*CTRRSP
Trigger: AGGAGATCGACGAGTACATCACGCAGGCCCGAGACA...AGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCCAAGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
3UTR-3UTR GCA 90 bp CGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAAGGCGGACTTCCCCCTCCCTaGTCCCAAACCAAGGCGAGC +
Preference number: 2 (lower is better)
Translates to: RPWSIWARTSPSLLPNQGGLPPP*SQTKAS
Trigger: GCTCGCCTTGGTTTGGGAGCAGGGAGGGGGAAGTCC...GCCTTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp TTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGAGCAGATCCCTTTCCCCCATGTaGCTTCAGGCCCGTCCTTGG +
Preference number: 2 (lower is better)
Translates to: FLLALTEAVAEAGAGVSRSLSPM*LQARPW
Trigger: CCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGA...TCTGCTCACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp TTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGAGCAGATCTTCCATCCACAGCTaGACCTGGAGGCCCCACCCA +
Preference number: 2 (lower is better)
Translates to: FLLALTEAVAEAGAGVSRSSIHS*TWRPHP
Trigger: TGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGA...TCTGCTCACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp GGGCAGGCACCGGAAATGGCCATCTGCGGGGCCCAGGGGCCTGAGACACCTAGGAATCTGCCGGGTTTGTaGTGGACCTTAGACTCAGGG +
Preference number: 2 (lower is better)
Translates to: GQAPEMAICGAQGPETPRNLPGL*WTLDSG
Trigger: CCCTGAGTCTAAGGTCCAGCACAAACCCGGCAGATT...CCTAGGTGTCTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGGTGCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613650.1
3UTR-3UTR CCA 90 bp GCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAAGCTGCAGCTCTGGCCTaGCCATCCTGGTCGCTGAAG +
Preference number: 2 (lower is better)
Translates to: ARPWSIWARTSPSLLPNQAAALA*PSWSLK
Trigger: CTTCAGCGACCAGGATGGCCAGGCCAGAGCTGCAGC...TTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR CAA 90 bp GGTGGAGGGGCTCAAGCTGAGTCGCCCCCGCCAGAGGTCTTCTTCTaGGGCCGGGTCTTCAGTGTCTTGGAAGCCAGTGGCTCAGCTTTG +
Preference number: 2 (lower is better)
Translates to: GGGAQAESPPPEVFF*GRVFSVLEASGSAL
Trigger: CAAAGCTGAGCCACTGGCTTCCAAGACACTGAAGACCCGGCCCAAGAAGAAGACCTCTGGCGGGGGCGACTCAGCTTGAGCCCCTCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613650.1
3UTR-3UTR TCA 90 bp CACGTGTTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGACGGTGGCAATGGGGTaGCCTAAAAGGGAGCAAGGT +
Preference number: 2 (lower is better)
Translates to: HVFLLALTEAVAEAGAGVTVAMG*PKREQG
Trigger: ACCTTGCTCCCTTTTAGGTCACCCCATTGCCACCGT...CACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAACACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp TTCCCCCTCCCTGCTCCCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCGCTTCATCCTTGCTCTaGAGCCTGCGGGGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: FPLPAPKPRRAVETRQDLASSLL*SLRGWR
Trigger: CCTCCACCCCCGCAGGCTGCAGAGCAAGGATGAAGC...GAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGGGAGCAGGGAGGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp TCCCCGTGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTTCCCTTTCCCCCATGTaGCTTCAGGCCCGTCCTTGG +
Preference number: 2 (lower is better)
Translates to: SPCAPFPPCAFRPVLGPSSLSPM*LQARPW
Trigger: CCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGA...AGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACACGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp GCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAATCTTCCATCCACAGCTaGACCTGGAGGCCCCACCCA +
Preference number: 2 (lower is better)
Translates to: ARPWSIWARTSPSLLPNQSSIHS*TWRPHP
Trigger: TGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGA...TTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp GGGAGGAGGCGACTGCTGGAGGGACAGTCCTTGACCCAAACTACCCCGAGCCCTAGACACCTAGGCTACTaGCACAGTGTGGAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: GRRRLLEGQSLTQTTPSPRHLGY*HSVEQG
Trigger: CCCCTGCTCCACACTGTGCCAGTAGCCTAGGTGTCT...AGGGCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCAGCAGTCGCCTCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp CCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCAGACACCTAGGCTACTaGCACAGTGTGGAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: PMCLQARPWSIWARTSPSRHLGY*HSVEQG
Trigger: CCCCTGCTCCACACTGTGCCAGTAGCCTAGGTGTCT...GGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp CGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAAGGCCGTCCTTGGTCCATCTaGGCTAGGACTTCCCCCTCC +
Preference number: 2 (lower is better)
Translates to: RPWSIWARTSPSLLPNQGRPWSI*ARTSPS
Trigger: GGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACG...GCCTTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp CCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTGCATTTCTCTTTCTCCTTCCTGGCCTGGCCATCCTaGTCGCTGAAGCACAGGCCA +
Preference number: 2 (lower is better)
Translates to: PLPKEPGAPRLLHFSFSFLAWPS*SLKHRP
Trigger: TGGCCTGTGCTTCAGCGACCAGGATGGCCAGGCCAG...GAAGGAGAAAGAGAAATGCAGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp CCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCCGGGTTTGTGCTaGACCTTAGACTCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: PMCLQARPWSIWARTSPSLPGLC*TLDSGQ
Trigger: CTGCCCTGAGTCTAAGGTCCAGCACAAACCCGGCAG...GGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613650.1
3UTR CAA 90 bp TGTGGGGCTCAGGGTGGGAGGAGGCGACTGCTGGAGGGACAGTCCTaGACCCAAACTACCCCGAGCCCTAGACCCAGAAAGACACACTCA +
Preference number: 2 (lower is better)
Translates to: CGAQGGRRRLLEGQS*TQTTPSPRPRKTHS
Trigger: TGAGTGTGTCTTTCTGGGTCTAGGGCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCAGCAGTCGCCTCCTCCCACCCTGAGCCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR TCA 90 bp ATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGCCTCCTGGCCCTGACTaGAGCCGTGGCAGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: IGSSSAKGPMGTLFPRNRPPGPD*SRGRSW
Trigger: CCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGG...CCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp GCAGCTGTGACTGCAGCATTGGCGGCAAGGTTCAGGCCCCTCTTGCCCACCCTCCTCTTGTCTCGGGCCTaGGTGATGTACTCGTCGATC +
Preference number: 2 (lower is better)
Translates to: AAVTAALAARFRPLLPTLLLSRA*VMYSSI
Trigger: GATCGACGAGTACATCACGCAGGCCCGAGACAAGAG...GAGGGTGGGCAAGAGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
3UTR-3UTR CCA 90 bp GCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAAAGACACCTAGGCTACTaGCACAGTGTGGAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: ARPWSIWARTSPSLLPNQRHLGY*HSVEQG
Trigger: CCCCTGCTCCACACTGTGCCAGTAGCCTAGGTGTCT...TTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp GTCTTCCATCCACAGCTGCACCTGGAGGCCCCACCCAGGGTCCCCAACGTCCTCAACCAAGGCGAGCAGTaGAAACACGACAGGACCTCT +
Preference number: 2 (lower is better)
Translates to: VFHPQLHLEAPPRVPNVLNQGEQ*KHDRTS
Trigger: AGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTT...GAGGACGTTGGGGACCCTGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp GTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTAACCAAGGCGAGCAGTaGAAACACGACAGGACCTCT +
Preference number: 2 (lower is better)
Translates to: VPKVQWAPSSQGTGSPAANQGEQ*KHDRTS
Trigger: AGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTT...AGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp TCCCCGTGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTCTTCAGGCCCGTCCTTaGTCCATCTGGGCTAGGACT +
Preference number: 2 (lower is better)
Translates to: SPCAPFPPCAFRPVLGPSLQARP*SIWART
Trigger: AGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAG...AGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACACGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp GGGAGGAGGCGACTGCTGGAGGGACAGTCCTTGACCCAAACTACCCCGAGCCCTGCTCAGAGCCTAGGATaGAGGGTTGAGCAGGGAAAG +
Preference number: 2 (lower is better)
Translates to: GRRRLLEGQSLTQTTPSPAQSLG*RVEQGK
Trigger: CTTTCCCTGCTCAACCCTCCATCCTAGGCTCTGAGC...AGGGCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCAGCAGTCGCCTCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp CCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTGCATTTCTCTTTCTCCTTCAGGGCCCAGTCTGCTTaGTACAGGATGGGGACCCTG +
Preference number: 2 (lower is better)
Translates to: PLPKEPGAPRLLHFSFSFRAQSA*YRMGTL
Trigger: CAGGGTCCCCATCCTGTACCAAGCAGACTGGGCCCT...GAAGGAGAAAGAGAAATGCAGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp TGTGACTGCAGCATTGGCGGCAAGGTTCAGGCCCCTCTTGCCCACCCTCATCATGCACGCTGGAGCCCTTaGTGTAAGGGGACAGCAGCC +
Preference number: 2 (lower is better)
Translates to: CDCSIGGKVQAPLAHPHHARWSP*CKGTAA
Trigger: GGCTGCTGTCCCCTTACACCAAGGGCTCCAGCGTGC...ATGATGAGGGTGGGCAAGAGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507511.5
3UTR-3UTR CCA 90 bp GTCTTCCATCCACAGCTGCACCTGGAGGCCCCACCCAGGGTCCCCAACGTCCTCGGGTCTTCAGTGTCTTaGAAGCCAGTGGCTCAGCTT +
Preference number: 2 (lower is better)
Translates to: VFHPQLHLEAPPRVPNVLGSSVS*KPVAQL
Trigger: AAGCTGAGCCACTGGCTTCCAAGACACTGAAGACCC...GAGGACGTTGGGGACCCTGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613650.1
3UTR-3UTR TCA 90 bp CCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAAGACACGACAGGACCTCTaGGAAGCGGATTGCTATGGG +
Preference number: 2 (lower is better)
Translates to: PVLGPSGLGLPPPCSQTKTRQDL*EADCYG
Trigger: CCCATAGCAATCCGCTTCTCAGAGGTCCTGTCGTGT...CTTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp GGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGACCGGAAATGGCCATCTaGGGGGCCCAGGGGCCTGAG +
Preference number: 2 (lower is better)
Translates to: GLLAHPVPKVQWAPSSQGPEMAI*GAQGPE
Trigger: CTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGG...TCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp TGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTACTCTGTCCGGGAATCTaGCGGGTTTGTGCTGGACCT +
Preference number: 2 (lower is better)
Translates to: CAPFPPCAFRPVLGPSGLLCPGI*RVCAGP
Trigger: AGGTCCAGCACAAACCCGGCAGATTCCCGGACAGAG...TAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613650.1
3UTR-3UTR CCA 90 bp TGCAGCTCTGGCCTGGCCATCCTGGTCGCTGAAGCACAGGCCAATCCCTGTCTTCTTCAGGCCCGTCCTTaGTCCATCTGGGCTAGGACT +
Preference number: 2 (lower is better)
Translates to: CSSGLAILVAEAQANPCLLQARP*SIWART
Trigger: AGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAG...AAGACAGGGATTGGCCTGTGCTTCAGCGACCAGGATGGCCAGGCCAGAGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp GCACGGTGGCAATGGGGTGACCTAAAAGGGAGCAAGGTCATAGGAGCAGGTGAGCTGGCCTGGCCATCCTaGTCGCTGAAGCACAGGCCA +
Preference number: 2 (lower is better)
Translates to: ARWQWGDLKGSKVIGAGELAWPS*SLKHRP
Trigger: TGGCCTGTGCTTCAGCGACCAGGATGGCCAGGCCAG...CTCACCTGCTCCTATGACCTTGCTCCCTTTTAGGTCACCCCATTGCCACCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp ATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGACAGGATGGGGACCCTaGGCAAGAGGGGATGGACCC +
Preference number: 2 (lower is better)
Translates to: IGSSSAKGPMGTLFPRNRTGWGP*ARGDGP
Trigger: GGGTCCATCCCCTCTTGCCCAGGGTCCCCATCCTGT...CCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp GGGAGGAGGCGACTGCTGGAGGGACAGTCCTTGACCCAAACTACCCCGAGCCCTCAGAGGTCTTCTTCTTaGGCCGGGTCTTCAGTGTCT +
Preference number: 2 (lower is better)
Translates to: GRRRLLEGQSLTQTTPSPQRSSS*AGSSVS
Trigger: AGACACTGAAGACCCGGCCCAAGAAGAAGACCTCTG...AGGGCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCAGCAGTCGCCTCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613650.1
3UTR-3UTR TCA 90 bp CCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTGCATTTCTCTTTCTCCTTCACACGACAGGACCTCTaGGAAGCGGATTGCTATGGG +
Preference number: 2 (lower is better)
Translates to: PLPKEPGAPRLLHFSFSFTRQDL*EADCYG
Trigger: CCCATAGCAATCCGCTTCTCAGAGGTCCTGTCGTGT...GAAGGAGAAAGAGAAATGCAGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR GCA 90 bp ATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGCTGAGGCTTCATCCTTaGTCTGCAGCCTGCGGGGGT +
Preference number: 2 (lower is better)
Translates to: IGSSSAKGPMGTLFPRNRLRLHP*SAACGG
Trigger: ACCCCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAG...CCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp TGCAGCTCTGGCCTGGCCATCCTGGTCGCTGAAGCACAGGCCAATCCCTGTCTTTCAGTCCTCAGCCTCTaGTCCACCCTCTACCCTCAA +
Preference number: 2 (lower is better)
Translates to: CSSGLAILVAEAQANPCLSVLSL*STLYPQ
Trigger: TTGAGGGTAGAGGGTGGACCAGAGGCTGAGGACTGA...AAGACAGGGATTGGCCTGTGCTTCAGCGACCAGGATGGCCAGGCCAGAGCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp GCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAAAGAAGCGGATTGCTATaGGCTTCAGCAAGGCACTGG +
Preference number: 2 (lower is better)
Translates to: ARPWSIWARTSPSLLPNQRSGLL*ASARHW
Trigger: CCAGTGCCTTGCTGAAGCCCATAGCAATCCGCTTCT...TTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp ATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGGGGCACGGTGGCAATaGGGTGACCTAAAAGGGAGC +
Preference number: 2 (lower is better)
Translates to: IGSSSAKGPMGTLFPRNRGARWQ*GDLKGS
Trigger: GCTCCCTTTTAGGTCACCCCATTGCCACCGTGCCCC...CCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAAT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp ATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGCTGCTTGGTACAGGATaGGGACCCTGGGCAAGAGGG +
Preference number: 2 (lower is better)
Translates to: IGSSSAKGPMGTLFPRNRLLGTG*GPWARG
Trigger: CCCTCTTGCCCAGGGTCCCCATCCTGTACCAAGCAG...CCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp GCACGGTGGCAATGGGGTGACCTAAAAGGGAGCAAGGTCATAGGAGCAGGTGAGCTTCAGGCCCGTCCTTaGTCCATCTGGGCTAGGACT +
Preference number: 2 (lower is better)
Translates to: ARWQWGDLKGSKVIGAGELQARP*SIWART
Trigger: AGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAG...CTCACCTGCTCCTATGACCTTGCTCCCTTTTAGGTCACCCCATTGCCACCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR TCA 90 bp ACAGGACCTCTGAGAAGCGGATTGCTATGGGCTTCAGCAAGGCACTGGGTGGGTACACGACAGGACCTCTaGGAAGCGGATTGCTATGGG +
Preference number: 2 (lower is better)
Translates to: TGPLRSGLLWASARHWVGTRQDL*EADCYG
Trigger: CCCATAGCAATCCGCTTCTCAGAGGTCCTGTCGTGT...ACCCACCCAGTGCCTTGCTGAAGCCCATAGCAATCCGCTTCTCAGAGGTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp ACAGGACCTCTGAGAAGCGGATTGCTATGGGCTTCAGCAAGGCACTGGGTGGGTTCAGTCCTCAGCCTCTaGTCCACCCTCTACCCTCAA +
Preference number: 2 (lower is better)
Translates to: TGPLRSGLLWASARHWVGSVLSL*STLYPQ
Trigger: TTGAGGGTAGAGGGTGGACCAGAGGCTGAGGACTGA...ACCCACCCAGTGCCTTGCTGAAGCCCATAGCAATCCGCTTCTCAGAGGTCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp GGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGACGTCCTTGGTCCATCTaGGCTAGGACTTCCCCCTCC +
Preference number: 2 (lower is better)
Translates to: GLLAHPVPKVQWAPSSQGRPWSI*ARTSPS
Trigger: GGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACG...TCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp ACAGGACCTCTGAGAAGCGGATTGCTATGGGCTTCAGCAAGGCACTGGGTGGGTAGAAGCGGATTGCTATaGGCTTCAGCAAGGCACTGG +
Preference number: 2 (lower is better)
Translates to: TGPLRSGLLWASARHWVGRSGLL*ASARHW
Trigger: CCAGTGCCTTGCTGAAGCCCATAGCAATCCGCTTCT...ACCCACCCAGTGCCTTGCTGAAGCCCATAGCAATCCGCTTCTCAGAGGTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp GCACGGTGGCAATGGGGTGACCTAAAAGGGAGCAAGGTCATAGGAGCAGGTGAGTGGGTTTGGCCCTCTTaGGAGCTTTGTCTCCCATGT +
Preference number: 2 (lower is better)
Translates to: ARWQWGDLKGSKVIGAGEWVWPS*ELCLPC
Trigger: ACATGGGAGACAAAGCTCCCAAGAGGGCCAAACCCA...CTCACCTGCTCCTATGACCTTGCTCCCTTTTAGGTCACCCCATTGCCACCGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613650.1
3UTR-3UTR TCA 90 bp AATGAGGTGCCAGAGTTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGGCCATCCTGGTCGCTaGAGCACAGGCCAATCCCTG +
Preference number: 2 (lower is better)
Translates to: NEVPEFGLLAHPVPKVQWGHPGR*STGQSL
Trigger: CAGGGATTGGCCTGTGCTTCAGCGACCAGGATGGCC...CCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTGGCACCTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254901.9
3UTR-3UTR GCA 90 bp GGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAGAGCCCCGCGGCTCCTaGATTTCTCTTTCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: GLLAHPVPKVQWAPSSQGEPRGS*ISLSPS
Trigger: TGAAGGAGAAAGAGAAATGCAGGAGCCGCGGGGCTC...TCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp CAGAGTTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCGTCCTTGGTCCATCTaGGCTAGGACTTCCCCCTCC +
Preference number: 2 (lower is better)
Translates to: QSLVYWLIQCQRSNGHPLRPWSI*ARTSPS
Trigger: GGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACG...AAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp CCTCATCATGGTCTCATAGCTCTTGTCTCGGGCCTGCGTGATGTACTCGTCGATCTTGTTGGACAGCGTTaGGTGCACGAACTTGCGGTA +
Preference number: 2 (lower is better)
Translates to: PHHGLIALVSGLRDVLVDLVGQR*VHELAV
Trigger: TACCGCAAGTTCGTGCACCCAACGCTGTCCAACAAG...ATCGACGAGTACATCACGCAGGCCCGAGACAAGAGCTATGAGACCATGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507511.5
3UTR-3UTR CCA 90 bp CAGAGTTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTTCAGTCCTCAGCCTCTaGTCCACCCTCTACCCTCAA +
Preference number: 2 (lower is better)
Translates to: QSLVYWLIQCQRSNGHPLSVLSL*STLYPQ
Trigger: TTGAGGGTAGAGGGTGGACCAGAGGCTGAGGACTGA...AAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CCA 90 bp AATGAGGTGCCAGAGTTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGAGCCCAGGGGCACGGTaGCAATGGGGTGACCTAAAA +
Preference number: 2 (lower is better)
Translates to: NEVPEFGLLAHPVPKVQWSPGAR*QWGDLK
Trigger: TTTTAGGTCACCCCATTGCCACCGTGCCCCTGGGCT...CCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTGGCACCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254901.9
3UTR GCA 72 bp CTGCCAGGGCTGGGTCGGAGGCGGCCGTCAGGCCTCTaGAGGGGCAGTGCGTCCTCGTCCCGGATCAGGGTC +
Preference number: 3 (lower is better)
Translates to: LPGLGRRRPSGL*RGSASSSRIRV
Trigger: GACCCTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCGCCTCCGACCCAGCCCTGGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
3UTR-3UTR CAA 90 bp CGGCCGTCAGGCCTCTGCAGGGGCAGTGCGTCCTCGTCCCGGATCAGGGTCAGGAGGTTCAGGCCCCTCTaGCCCACCCTCATCATGGTC +
Preference number: 3 (lower is better)
Translates to: RPSGLCRGSASSSRIRVRRFRPL*PTLIMV
Trigger: GACCATGATGAGGGTGGGCAAGAGGGGCCTGAACCT...CCTGACCCTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507511.5
3UTR GCA 72 bp GGCAGTGCGTCCTCGTCCCGGATCAGGGTCAGGTCCTaGATGCTGAAGCTGCGGAGCTTCTCTGACAGCACC +
Preference number: 3 (lower is better)
Translates to: GSASSSRIRVRS*MLKLRSFSDST
Trigger: GGTGCTGTCAGAGAAGCTCCGCAGCTTCAGCATGCAGGACCTGACCCTGATCCGGGACGAGGACGCACTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507511.5
3UTR-3UTR CAA 90 bp TCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCCTGGAGGGACAGTCCTaGACCCAAACTACCCCGAGC +
Preference number: 3 (lower is better)
Translates to: SSAKGPMGTLFPRNREPRLEGQS*TQTTPS
Trigger: GCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCAG...GCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CAA 90 bp GTCAGGCCTCTGCAGGGGCAGTGCGTCCTCGTCCCGGATCAGGGTCAGGTCCTGATCTCCTTCTCCTTGTaGGACAGCGTTGGGTGCACG +
Preference number: 3 (lower is better)
Translates to: VRPLQGQCVLVPDQGQVLISFSL*DSVGCT
Trigger: CGTGCACCCAACGCTGTCCAACAAGGAGAAGGAGAT...CAGGACCTGACCCTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGGCCTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
3UTR-3UTR CAA 90 bp CACGTGTTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGCCAGAGGTCTTCTTCTaGGGCCGGGTCTTCAGTGTC +
Preference number: 3 (lower is better)
Translates to: HVFLLALTEAVAEAGAGVPEVFF*GRVFSV
Trigger: GACACTGAAGACCCGGCCCAAGAAGAAGACCTCTGG...CACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAACACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613650.1
3UTR-3UTR CAA 90 bp GTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTCTGAGAAGCGGATaGCTATGGGCTTCAGCAAGG +
Preference number: 3 (lower is better)
Translates to: VPKVQWAPSSQGTGSPAAPLRSG*LWASAR
Trigger: CCTTGCTGAAGCCCATAGCAATCCGCTTCTCAGAGG...AGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR CCA 72 bp TCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTaGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAA +
Preference number: 3 (lower is better)
Translates to: SPMCLQARPWSI*ARTSPSLLPNQ
Trigger: TTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR CCA 72 bp GGAGCACGGGAGTCCAGCCCAGGGGCACGGTGGCAATaGGGTGACCTAAAAGGGAGCAAGGTCATAGGAGCA +
Preference number: 3 (lower is better)
Translates to: GARESSPGARWQ*GDLKGSKVIGA
Trigger: TGCTCCTATGACCTTGCTCCCTTTTAGGTCACCCCATTGCCACCGTGCCCCTGGGCTGGACTCCCGTGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CAA 90 bp GGGAGGAGGCGACTGCTGGAGGGACAGTCCTTGACCCAAACTACCCCGAGCCCTCCTCTGAGAAGCGGATaGCTATGGGCTTCAGCAAGG +
Preference number: 3 (lower is better)
Translates to: GRRRLLEGQSLTQTTPSPPLRSG*LWASAR
Trigger: CCTTGCTGAAGCCCATAGCAATCCGCTTCTCAGAGG...AGGGCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCAGCAGTCGCCTCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CAA 90 bp GCCCTTGGCGGCAGCTGTGACTGCAGCATTGGCGGCAAGGTTCAGGCCCCTCTTTCGATCTCCTTCTCCTaGTTGGACAGCGTTGGGTGC +
Preference number: 3 (lower is better)
Translates to: ALGGSCDCSIGGKVQAPLSISFS*LDSVGC
Trigger: GCACCCAACGCTGTCCAACAAGGAGAAGGAGATCGA...AAGAGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCCAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
3UTR CCA 72 bp CTCAAGCTGAGTCGCCCCCGCCAGAGGTCTTCTTCTTaGGCCGGGTCTTCAGTGTCTTGGAAGCCAGTGGCT +
Preference number: 3 (lower is better)
Translates to: LKLSRPRQRSSS*AGSSVSWKPVA
Trigger: AGCCACTGGCTTCCAAGACACTGAAGACCCGGCCCAAGAAGAAGACCTCTGGCGGGGGCGACTCAGCTTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613650.1
3UTR-3UTR CAA 90 bp GCCCCTCTTGCCCACCCTCATCATGGTCTCATAGCTCTTGTCTCGGGCCTGCGTCCTTGTTGGACAGCGTaGGGTGCACGAACTTGCGGT +
Preference number: 3 (lower is better)
Translates to: APLAHPHHGLIALVSGLRPCWTA*GARTCG
Trigger: ACCGCAAGTTCGTGCACCCAACGCTGTCCAACAAGG...ACGCAGGCCCGAGACAAGAGCTATGAGACCATGATGAGGGTGGGCAAGAGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
3UTR-3UTR CAA 90 bp TCCCCGTGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGAATCTGCCGGGTTaGTGCTGGACCTTAGACTCA +
Preference number: 3 (lower is better)
Translates to: SPCAPFPPCAFRPVLGPSGNLPG*CWTLDS
Trigger: TGAGTCTAAGGTCCAGCACAAACCCGGCAGATTCCC...AGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACACGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613650.1
3UTR-3UTR CAA 90 bp TCCCCGTGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGCCCTCTTGGGAGCTTaGTCTCCCATGTCATCCTCA +
Preference number: 3 (lower is better)
Translates to: SPCAPFPPCAFRPVLGPSALLGA*SPMSSS
Trigger: TGAGGATGACATGGGAGACAAAGCTCCCAAGAGGGC...AGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACACGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613650.1
3UTR GCA 72 bp GTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTaGTCCCAAACCAAGGCGAGCAGTGGAAACACGACA +
Preference number: 3 (lower is better)
Translates to: VLGPSGLGLPPP*SQTKASSGNTT
Trigger: TGTCGTGTTTCCACTGCTCGCCTTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CAA 90 bp CCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTGCATTTCTCTTTCTCCTTCCCTCTGAGAAGCGGATaGCTATGGGCTTCAGCAAGG +
Preference number: 3 (lower is better)
Translates to: PLPKEPGAPRLLHFSFSFPLRSG*LWASAR
Trigger: CCTTGCTGAAGCCCATAGCAATCCGCTTCTCAGAGG...GAAGGAGAAAGAGAAATGCAGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CAA 90 bp TTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGAGCAGACCAGAGTTTGGTTTATaGGCTCATCCAGTGCCAAAG +
Preference number: 3 (lower is better)
Translates to: FLLALTEAVAEAGAGVSRPEFGL*AHPVPK
Trigger: CTTTGGCACTGGATGAGCCAATAAACCAAACTCTGG...TCTGCTCACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR CCA 72 bp ACTTCCCCCTCCCTGCTCCCAAACCAAGGCGAGCAGTaGAAACACGACAGGACCTCTGAGAAGCGGATTGCT +
Preference number: 3 (lower is better)
Translates to: TSPSLLPNQGEQ*KHDRTSEKRIA
Trigger: AGCAATCCGCTTCTCAGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGGGAGCAGGGAGGGGGAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR CCA 72 bp TTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATaGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCG +
Preference number: 3 (lower is better)
Translates to: FGLLAHPVPKVQ*APSSQGTGSPA
Trigger: CGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CAA 90 bp GGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGACTGGAGGGACAGTCCTaGACCCAAACTACCCCGAGC +
Preference number: 3 (lower is better)
Translates to: GLLAHPVPKVQWAPSSQGLEGQS*TQTTPS
Trigger: GCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCAG...TCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR-3UTR CAA 90 bp CCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCTGAGAAGCGGATTGCTATGGGTTTGGCCCTCTaGGGAGCTTTGTCTCCCATG +
Preference number: 3 (lower is better)
Translates to: PNQGEQWKHDRTSEKRIAMGLAL*GALSPM
Trigger: CATGGGAGACAAAGCTCCCAAGAGGGCCAAACCCAT...AGCAATCCGCTTCTCAGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613650.1
3UTR-3UTR CAA 90 bp GCCAGAGTTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCCGGGTCTTCAGTGTCTaGGAAGCCAGTGGCTCAGCT +
Preference number: 3 (lower is better)
Translates to: ARVWFIGSSSAKGPMGTLRVFSV*EASGSA
Trigger: AGCTGAGCCACTGGCTTCCAAGACACTGAAGACCCG...GAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613650.1
3UTR-3UTR CAA 90 bp GCCAGAGTTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCGCTTTGGGCGCTTTTTaGATGGGTTTGGCCCTCTTG +
Preference number: 3 (lower is better)
Translates to: ARVWFIGSSSAKGPMGTLALGAF*MGLALL
Trigger: CAAGAGGGCCAAACCCATCAAAAAAGCGCCCAAAGC...GAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613650.1
3UTR GCA 72 bp ATGAGGTGCCAGAGTTTGGTTTATTGGCTCATCCAGTaGCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAA +
Preference number: 3 (lower is better)
Translates to: MRCQSLVYWLIQ*QRSNGHPLPKE
Trigger: TTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTGGCACCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254901.9
CDS-3UTR TCA 90 bp CGGAGGCGGCCGTCAGGCCTCTGCAGGGGCAGTGCGTCCTCGTCCCGGATCAGGGAGGATGCAGCTGCCTaGGGCCGAGCGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: RRRPSGLCRGSASSSRIREDAAA*GRAAAA
Trigger: CGCCGCCGCCGCTCGGCCTCAGGCAGCTGCATCCTC...CCTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCGCCTCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR GCA 90 bp GGTCGGAGGCGGCCGTCAGGCCTCTGCAGGGGCAGTGCGTCCTCGTCCCGGATCGGCCGAGGATGCAGCTaGCTGAGGCCGAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: GRRRPSGLCRGSASSSRIGRGCS*LRPSGG
Trigger: GCCGCCGCTCGGCCTCAGGCAGCTGCATCCTCGGCC...GATCCGGGACGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCGCCTCCGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR TCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGGAGGATGCAGCTGCCTaGGGCCGAGCGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGEDAAA*GRAAAA
Trigger: CGCCGCCGCCGCTCGGCCTCAGGCAGCTGCATCCTC...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
CDS-3UTR TCA 90 bp CAGGGCGGGGCTGCAGCGGAACAGCGGTGGAGGCCGAGCAGTCCCCACCTCCTTTGGAGGGGCTCAAGCTaGGTCGCCCCCGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: QGGAAAEQRWRPSSPHLLWRGSS*VAPARG
Trigger: ACCTCTGGCGGGGGCGACTCAGCTTGAGCCCCTCCA...AAGGAGGTGGGGACTGCTCGGCCTCCACCGCTGTTCCGCTGCAGCCCCGCCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GGGCCCAGGGGCCTGAGACACCTAGGCTACTGGCACAGTGTGGAGCAGGGGCTGGGCCGAGGATGCAGCTaGCTGAGGCCGAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: GPRGLRHLGYWHSVEQGLGRGCS*LRPSGG
Trigger: GCCGCCGCTCGGCCTCAGGCAGCTGCATCCTCGGCC...CAGCCCCTGCTCCACACTGTGCCAGTAGCCTAGGTGTCTCAGGCCCCTGGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254901.9
ENST00000378339.7
CDS-3UTR GCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGGGCCGAGGATGCAGCTaGCTGAGGCCGAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGGRGCS*LRPSGG
Trigger: GCCGCCGCTCGGCCTCAGGCAGCTGCATCCTCGGCC...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
CDS-3UTR CCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGGGAGGCTGCCAGGGCTaGGTCGGAGGCGGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGGGCQG*VGGGRQ
Trigger: CTGACGGCCGCCTCCGACCCAGCCCTGGCAGCCTCC...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
CDS-3UTR GCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGCGGCCGTCAGGCCTCTaGAGGGGCAGTGCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGRPSGL*RGSASS
Trigger: CGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCG...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
CDS-3UTR GCA 90 bp GTCAGGCCTCTGCAGGGGCAGTGCGTCCTCGTCCCGGATCAGGGTCAGGTCCTGCGGCCGTCAGGCCTCTaGAGGGGCAGTGCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: VRPLQGQCVLVPDQGQVLRPSGL*RGSASS
Trigger: CGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCG...CAGGACCTGACCCTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGGCCTGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR GCA 90 bp GTCTTCCATCCACAGCTGCACCTGGAGGCCCCACCCAGGGTCCCCAACGTCCTCGGGGCAGGGCGGGGCTaGAGCGGAACAGCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: VFHPQLHLEAPPRVPNVLGAGRG*SGTAVE
Trigger: CTCCACCGCTGTTCCGCTGCAGCCCCGCCCTGCCCC...GAGGACGTTGGGGACCCTGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GGGTGGGCCCTGAGGAGCACGGGAGTCCAGCCCAGGGGCACGGTGGCAATGGGGGGACTTCCCCCTCCCTaGTCCCAAACCAAGGCGAGC +
Preference number: 4 (lower is better)
Translates to: GWALRSTGVQPRGTVAMGGLPPP*SQTKAS
Trigger: GCTCGCCTTGGTTTGGGAGCAGGGAGGGGGAAGTCC...CCCCATTGCCACCGTGCCCCTGGGCTGGACTCCCGTGCTCCTCAGGGCCCACCC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGGCTGCGGAGCTTCTCTaGCAGCACCCCCTTGGCGGC +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGAAELL*QHPLGG
Trigger: GCCGCCAAGGGGGTGCTGTCAGAGAAGCTCCGCAGC...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254901.9
ENST00000506158.5
CDS-3UTR TCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGTGGAGGGGCTCAAGCTaGGTCGCCCCCGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGWRGSS*VAPARG
Trigger: ACCTCTGGCGGGGGCGACTCAGCTTGAGCCCCTCCA...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR TCA 90 bp CCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGAGCAGGGGTGGGCCCTaGGGAGCACGGGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PVPKVQWAPSSQGTGSPASRGGP*GARESS
Trigger: GCTGGACTCCCGTGCTCCTCAGGGCCCACCCCTGCT...CGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCGGCCGTCAGGCCTCTaGAGGGGCAGTGCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: VPKVQWAPSSQGTGSPAARPSGL*RGSASS
Trigger: CGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCG...AGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254901.9
ENST00000378339.7
CDS-3UTR GCA 90 bp CAGGGCGGGGCTGCAGCGGAACAGCGGTGGAGGCCGAGCAGTCCCCACCTCCTTGGACTTCCCCCTCCCTaGTCCCAAACCAAGGCGAGC +
Preference number: 4 (lower is better)
Translates to: QGGAAAEQRWRPSSPHLLGLPPP*SQTKAS
Trigger: GCTCGCCTTGGTTTGGGAGCAGGGAGGGGGAAGTCC...AAGGAGGTGGGGACTGCTCGGCCTCCACCGCTGTTCCGCTGCAGCCCCGCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CAGGGCGGGGCTGCAGCGGAACAGCGGTGGAGGCCGAGCAGTCCCCACCTCCTTGCACGCTGGAGCCCTTaGTGTAAGGGGACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QGGAAAEQRWRPSSPHLLARWSP*CKGTAA
Trigger: GGCTGCTGTCCCCTTACACCAAGGGCTCCAGCGTGC...AAGGAGGTGGGGACTGCTCGGCCTCCACCGCTGTTCCGCTGCAGCCCCGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAGGAGGCTGCCAGGGCTaGGTCGGAGGCGGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: LQARPWSIWARTSPSLLPGGCQG*VGGGRQ
Trigger: CTGACGGCCGCCTCCGACCCAGCCCTGGCAGCCTCC...TGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254901.9
ENST00000378339.7
CDS-3UTR CCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGGCAGCGGAACAGCGGTaGAGGCCGAGCAGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGAAEQR*RPSSPH
Trigger: GTGGGGACTGCTCGGCCTCCACCGCTGTTCCGCTGC...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CAGGGCGGGGCTGCAGCGGAACAGCGGTGGAGGCCGAGCAGTCCCCACCTCCTTGCTGCAGCTCTGGCCTaGCCATCCTGGTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: QGGAAAEQRWRPSSPHLLAAALA*PSWSLK
Trigger: CTTCAGCGACCAGGATGGCCAGGCCAGAGCTGCAGC...AAGGAGGTGGGGACTGCTCGGCCTCCACCGCTGTTCCGCTGCAGCCCCGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GGCCGTCAGGCCTCTGCAGGGGCAGTGCGTCCTCGTCCCGGATCAGGGTCAGGTTCTGACAGCACCCCCTaGCCCTTGGCGGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: GRQASAGAVRPRPGSGSGSDSTP*PLAAAV
Trigger: CACAGCTGCCGCCAAGGGCCAGGGGGTGCTGTCAGA...ACCTGACCCTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR TCA 90 bp TGCAGCTCTGGCCTGGCCATCCTGGTCGCTGAAGCACAGGCCAATCCCTGTCTTGAGGATGCAGCTGCCTaGGGCCGAGCGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: CSSGLAILVAEAQANPCLEDAAA*GRAAAA
Trigger: CGCCGCCGCCGCTCGGCCTCAGGCAGCTGCATCCTC...AAGACAGGGATTGGCCTGTGCTTCAGCGACCAGGATGGCCAGGCCAGAGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254901.9
ENST00000378339.7
CDS-3UTR TCA 90 bp GTCTTCCATCCACAGCTGCACCTGGAGGCCCCACCCAGGGTCCCCAACGTCCTCTGGAGGGGCTCAAGCTaGGTCGCCCCCGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: VFHPQLHLEAPPRVPNVLWRGSS*VAPARG
Trigger: ACCTCTGGCGGGGGCGACTCAGCTTGAGCCCCTCCA...GAGGACGTTGGGGACCCTGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp CAGGGCGGGGCTGCAGCGGAACAGCGGTGGAGGCCGAGCAGTCCCCACCTCCTTTGGAGGGACAGTCCTTaGCCCAAACTACCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: QGGAAAEQRWRPSSPHLLWRDSP*PKLPRA
Trigger: GGCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCA...AAGGAGGTGGGGACTGCTCGGCCTCCACCGCTGTTCCGCTGCAGCCCCGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp TCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCAGCAGGGGTGGGCCCTaGGGAGCACGGGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SSAKGPMGTLFPRNREPRSRGGP*GARESS
Trigger: GCTGGACTCCCGTGCTCCTCAGGGCCCACCCCTGCT...GCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GGGTGGGCCCTGAGGAGCACGGGAGTCCAGCCCAGGGGCACGGTGGCAATGGGGATCAGGGTCAGGTCCTaGATGCTGAAGCTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: GWALRSTGVQPRGTVAMGIRVRS*MLKLRS
Trigger: GCTCCGCAGCTTCAGCATGCAGGACCTGACCCTGAT...CCCCATTGCCACCGTGCCCCTGGGCTGGACTCCCGTGCTCCTCAGGGCCCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGCCTCTGCAGGGGCAGTaGGTCCTCGTCCCGGATCAG +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGPLQGQ*VLVPDQ
Trigger: CTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGG...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CCA 90 bp GGGCAGGCACCGGAAATGGCCATCTGCGGGGCCCAGGGGCCTGAGACACCTAGGCTGGCCTGGCCATCCTaGTCGCTGAAGCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: GQAPEMAICGAQGPETPRLAWPS*SLKHRP
Trigger: TGGCCTGTGCTTCAGCGACCAGGATGGCCAGGCCAG...CCTAGGTGTCTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGGTGCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp TCCCCGTGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGAGGCTGCCAGGGCTaGGTCGGAGGGCCGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SPCAPFPPCAFRPVLGPSGGCQG*VGGPSG
Trigger: GCCTGACGGCCCTCCGACCCAGCCCTGGCAGCCTCC...AGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACACGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613650.1
3UTR CAA 72 bp ACCCCCTGGCCCTTGGCGGCAGCTGTGACTGCAGCATaGGCGGCAAGGTTCAGGCCCCTCTTGCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: TPWPLAAAVTAA*AARFRPLLPTL
Trigger: GAGGGTGGGCAAGAGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCCAAGGGCCAGGGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR TCA 90 bp GGGCAGGCACCGGAAATGGCCATCTGCGGGGCCCAGGGGCCTGAGACACCTAGGTGGAGGGACAGTCCTTaGCCCAAACTACCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: GQAPEMAICGAQGPETPRWRDSP*PKLPRA
Trigger: GGCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCA...CCTAGGTGTCTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGGTGCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GGGCCCAGGGGCCTGAGACACCTAGGCTACTGGCACAGTGTGGAGCAGGGGCTGGCTTCATCCTTGCTCTaGAGCCTGCGGGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GPRGLRHLGYWHSVEQGLASSLL*SLRGWR
Trigger: CCTCCACCCCCGCAGGCTGCAGAGCAAGGATGAAGC...CAGCCCCTGCTCCACACTGTGCCAGTAGCCTAGGTGTCTCAGGCCCCTGGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGGCTTCATCCTTGCTCTaGAGCCTGCGGGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGASSLL*SLRGWR
Trigger: CCTCCACCCCCGCAGGCTGCAGAGCAAGGATGAAGC...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR GCA 90 bp TTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGAGCAGACCGGAAATGGCCATCTaGGGGGCCCAGGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: FLLALTEAVAEAGAGVSRPEMAI*GAQGPE
Trigger: CTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGG...TCTGCTCACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GGGCAGGCACCGGAAATGGCCATCTGCGGGGCCCAGGGGCCTGAGACACCTAGGAACGTCCTCCCCGTGTaGTCCCTTTCCCCCATGTGC +
Preference number: 4 (lower is better)
Translates to: GQAPEMAICGAQGPETPRNVLPV*SLSPMC
Trigger: GCACATGGGGGAAAGGGAGCACACGGGGAGGACGTT...CCTAGGTGTCTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGGTGCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAAGGGCCGTCAGGCCTCTaGAGGGGCAGTGCGTCCTCG +
Preference number: 4 (lower is better)
Translates to: ARPWSIWARTSPSLLPNQGPSGL*RGSASS
Trigger: CGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCC...TTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613650.1
CDS-3UTR CCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGGCACGCTGGAGCCCTTaGTGTAAGGGGACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGARWSP*CKGTAA
Trigger: GGCTGCTGTCCCCTTACACCAAGGGCTCCAGCGTGC...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CCA 90 bp TGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGAGGCTGCCAGGGCTaGGTCGGAGGCGGCCGTCAG +
Preference number: 4 (lower is better)
Translates to: CAPFPPCAFRPVLGPSGLGGCQG*VGGGRQ
Trigger: CTGACGGCCGCCTCCGACCCAGCCCTGGCAGCCTCC...TAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254901.9
ENST00000378339.7
CDS-3UTR CCA 90 bp CCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCGCAGCGGAACAGCGGTaGAGGCCGAGCAGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PMCLQARPWSIWARTSPSAAEQR*RPSSPH
Trigger: GTGGGGACTGCTCGGCCTCCACCGCTGTTCCGCTGC...GGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GGGCCCAGGGGCCTGAGACACCTAGGCTACTGGCACAGTGTGGAGCAGGGGCTGACAGGATGGGGACCCTaGGCAAGAGGGGATGGACCC +
Preference number: 4 (lower is better)
Translates to: GPRGLRHLGYWHSVEQGLTGWGP*ARGDGP
Trigger: GGGTCCATCCCCTCTTGCCCAGGGTCCCCATCCTGT...CAGCCCCTGCTCCACACTGTGCCAGTAGCCTAGGTGTCTCAGGCCCCTGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GGGCAGGCACCGGAAATGGCCATCTGCGGGGCCCAGGGGCCTGAGACACCTAGGAGGGCCCAGTCTGCTTaGTACAGGATGGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: GQAPEMAICGAQGPETPRRAQSA*YRMGTL
Trigger: CAGGGTCCCCATCCTGTACCAAGCAGACTGGGCCCT...CCTAGGTGTCTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGGTGCCTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGGCGTCTCGGCCGTGGTaGAGAAGGCAAAGACGATCC +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGASRPW*RRQRRS
Trigger: GGATCGTCTTTGCCTTCTTCACCACGGCCGAGACGC...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR TCA 90 bp CCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTGGCCATCCTGGTCGCTaGAGCACAGGCCAATCCCTG +
Preference number: 4 (lower is better)
Translates to: PKVQWAPSSQGTGSPAAPGHPGR*STGQSL
Trigger: CAGGGATTGGCCTGTGCTTCAGCGACCAGGATGGCC...AGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp AGGCACCGGAAATGGCCATCTGCGGGGCCCAGGGGCCTGAGACACCTAGGCTACGGCCATCCTGGTCGCTaGAGCACAGGCCAATCCCTG +
Preference number: 4 (lower is better)
Translates to: RHRKWPSAGPRGLRHLGYGHPGR*STGQSL
Trigger: CAGGGATTGGCCTGTGCTTCAGCGACCAGGATGGCC...GTAGCCTAGGTGTCTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGGTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp CAGGGCGGGGCTGCAGCGGAACAGCGGTGGAGGCCGAGCAGTCCCCACCTCCTTCTCTTGTCTCGGGCCTaGGTGATGTACTCGTCGATC +
Preference number: 4 (lower is better)
Translates to: QGGAAAEQRWRPSSPHLLLLSRA*VMYSSI
Trigger: GATCGACGAGTACATCACGCAGGCCCGAGACAAGAG...AAGGAGGTGGGGACTGCTCGGCCTCCACCGCTGTTCCGCTGCAGCCCCGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GGGCCCAGGGGCCTGAGACACCTAGGCTACTGGCACAGTGTGGAGCAGGGGCTGGGCGGCAGCTGTGACTaGAGCATTGGCGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: GPRGLRHLGYWHSVEQGLGGSCD*SIGGKV
Trigger: AACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCC...CAGCCCCTGCTCCACACTGTGCCAGTAGCCTAGGTGTCTCAGGCCCCTGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGGGCGGCAGCTGTGACTaGAGCATTGGCGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGGGSCD*SIGGKV
Trigger: AACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCC...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR GCA 90 bp TTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGAGCAGACCTCTGCAGGGGCAGTaGGTCCTCGTCCCGGATCAG +
Preference number: 4 (lower is better)
Translates to: FLLALTEAVAEAGAGVSRPLQGQ*VLVPDQ
Trigger: CTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGG...TCTGCTCACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGCTGAGGCTTCATCCTTaGTCTGCAGCCTGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGLRLHP*SAACGG
Trigger: ACCCCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAG...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR GCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGTCCCTTTCCCCCATGTaGCTTCAGGCCCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGSLSPM*LQARPW
Trigger: CCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGA...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CGGAGGCGGCCGTCAGGCCTCTGCAGGGGCAGTGCGTCCTCGTCCCGGATCAGGCTTGTTGGACAGCGTTaGGTGCACGAACTTGCGGTA +
Preference number: 4 (lower is better)
Translates to: RRRPSGLCRGSASSSRIRLVGQR*VHELAV
Trigger: TACCGCAAGTTCGTGCACCCAACGCTGTCCAACAAG...CCTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCGCCTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR CCA 90 bp CGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAAGGCGGCAGGCACCGGAAATaGCCATCTGCGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: RPWSIWARTSPSLLPNQGGRHRK*PSAGPR
Trigger: CCTGGGCCCCGCAGATGGCCATTTCCGGTGCCTGCC...GCCTTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GGGCCCAGGGGCCTGAGACACCTAGGCTACTGGCACAGTGTGGAGCAGGGGCTGCGTCCTTGGTCCATCTaGGCTAGGACTTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GPRGLRHLGYWHSVEQGLRPWSI*ARTSPS
Trigger: GGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACG...CAGCCCCTGCTCCACACTGTGCCAGTAGCCTAGGTGTCTCAGGCCCCTGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGCTGGCCTGGCCATCCTaGTCGCTGAAGCACAGGCCA +
Preference number: 4 (lower is better)
Translates to: PVPKVQWAPSSQGTGSPALAWPS*SLKHRP
Trigger: TGGCCTGTGCTTCAGCGACCAGGATGGCCAGGCCAG...CGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GGGCCCAGGGGCCTGAGACACCTAGGCTACTGGCACAGTGTGGAGCAGGGGCTGGGGGCACGGTGGCAATaGGGTGACCTAAAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: GPRGLRHLGYWHSVEQGLGARWQ*GDLKGS
Trigger: GCTCCCTTTTAGGTCACCCCATTGCCACCGTGCCCC...CAGCCCCTGCTCCACACTGTGCCAGTAGCCTAGGTGTCTCAGGCCCCTGGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTACAGGATGGGGACCCTaGGCAAGAGGGGATGGACCC +
Preference number: 4 (lower is better)
Translates to: VPKVQWAPSSQGTGSPAATGWGP*ARGDGP
Trigger: GGGTCCATCCCCTCTTGCCCAGGGTCCCCATCCTGT...AGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp TCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCTCTGACAGCACCCCCTaGCCCTTGGCGGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SSAKGPMGTLFPRNREPRSDSTP*PLAAAV
Trigger: CACAGCTGCCGCCAAGGGCCAGGGGGTGCTGTCAGA...GCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGGGCAGGCATGGTTACTaGGCCTCTCAGCCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGGRHGY*ASQPRA
Trigger: TGCCCTTGGCTGAGAGGCCCAGTAACCATGCCTGCC...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506158.5
CDS-3UTR TCA 90 bp CACGTGTTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGGCGTCTCGGCCGTGGTaGAGAAGGCAAAGACGATCC +
Preference number: 4 (lower is better)
Translates to: HVFLLALTEAVAEAGAGVASRPW*RRQRRS
Trigger: GGATCGTCTTTGCCTTCTTCACCACGGCCGAGACGC...CACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAACACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp AGGCACCGGAAATGGCCATCTGCGGGGCCCAGGGGCCTGAGACACCTAGGCTACGCGTCTCGGCCGTGGTaGAGAAGGCAAAGACGATCC +
Preference number: 4 (lower is better)
Translates to: RHRKWPSAGPRGLRHLGYASRPW*RRQRRS
Trigger: GGATCGTCTTTGCCTTCTTCACCACGGCCGAGACGC...GTAGCCTAGGTGTCTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGTGTCTCGGGCCTGCGTaGTGTACTCGTCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGCLGPA*CTRRSP
Trigger: AGGAGATCGACGAGTACATCACGCAGGCCCGAGACA...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR TCA 90 bp CCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTGCATTTCTCTTTCTCCTTCGCTGCGGAGCTTCTCTaGCAGCACCCCCTTGGCGGC +
Preference number: 4 (lower is better)
Translates to: PLPKEPGAPRLLHFSFSFAAELL*QHPLGG
Trigger: GCCGCCAAGGGGGTGCTGTCAGAGAAGCTCCGCAGC...GAAGGAGAAAGAGAAATGCAGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254901.9
CDS-3UTR TCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGTCAGGTCCTGCATGCTaGAGCTGCGGAGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGSGPAC*SCGASL
Trigger: CAGAGAAGCTCCGCAGCTTCAGCATGCAGGACCTGA...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR TCA 90 bp TCCCCGTGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTCCTCCTGGCCCTGACTaGAGCCGTGGCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SPCAPFPPCAFRPVLGPSPPGPD*SRGRSW
Trigger: CCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGG...AGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACACGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGGGTTCAGGCCCCTCTTaGCCACCCTCATCATGGTCT +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGGSGPS*PPSSWS
Trigger: AGACCATGATGAGGGTGGGCAAGAGGGGCCTGAACC...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR GCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGATCAGGGTCAGGTCCTaGATGCTGAAGCTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGIRVRS*MLKLRS
Trigger: GCTCCGCAGCTTCAGCATGCAGGACCTGACCCTGAT...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR GCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGCTCTGTCCGGGAATCTaGCGGGTTTGTGCTGGACCT +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGLCPGI*RVCAGP
Trigger: AGGTCCAGCACAAACCCGGCAGATTCCCGGACAGAG...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR GCA 90 bp CCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGCTGAGGCTTCATCCTTaGTCTGCAGCCTGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: PVPKVQWAPSSQGTGSPALRLHP*SAACGG
Trigger: ACCCCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAG...CGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCTGAGGCTTCATCCTTaGTCTGCAGCCTGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: VPKVQWAPSSQGTGSPAALRLHP*SAACGG
Trigger: ACCCCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAG...AGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp ACAGGACCTCTGAGAAGCGGATTGCTATGGGCTTCAGCAAGGCACTGGGTGGGTGGGGCAGGGCGGGGCTaGAGCGGAACAGCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: TGPLRSGLLWASARHWVGGAGRG*SGTAVE
Trigger: CTCCACCGCTGTTCCGCTGCAGCCCCGCCCTGCCCC...ACCCACCCAGTGCCTTGCTGAAGCCCATAGCAATCCGCTTCTCAGAGGTCCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp TCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGACTTCCCCCTCCCTaGTCCCAAACCAAGGCGAGC +
Preference number: 4 (lower is better)
Translates to: SSAKGPMGTLFPRNREPRGLPPP*SQTKAS
Trigger: GCTCGCCTTGGTTTGGGAGCAGGGAGGGGGAAGTCC...GCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp AGGCACCGGAAATGGCCATCTGCGGGGCCCAGGGGCCTGAGACACCTAGGCTACTCTTCCATCCACAGCTaGACCTGGAGGCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: RHRKWPSAGPRGLRHLGYSSIHS*TWRPHP
Trigger: TGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGA...GTAGCCTAGGTGTCTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGGTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GTCTTCCATCCACAGCTGCACCTGGAGGCCCCACCCAGGGTCCCCAACGTCCTCTCTTCCATCCACAGCTaGACCTGGAGGCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: VFHPQLHLEAPPRVPNVLSSIHS*TWRPHP
Trigger: TGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGA...GAGGACGTTGGGGACCCTGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp AGGCACCGGAAATGGCCATCTGCGGGGCCCAGGGGCCTGAGACACCTAGGCTACAAAAGAGCCCCCAGCTaGAGCTCTGGCCTGGCCATC +
Preference number: 4 (lower is better)
Translates to: RHRKWPSAGPRGLRHLGYKRAPS*SSGLAI
Trigger: GATGGCCAGGCCAGAGCTGCAGCTGGGGGCTCTTTT...GTAGCCTAGGTGTCTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGGTGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GCAGCTGTGACTGCAGCATTGGCGGCAAGGTTCAGGCCCCTCTTGCCCACCCTCGCACGCTGGAGCCCTTaGTGTAAGGGGACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: AAVTAALAARFRPLLPTLARWSP*CKGTAA
Trigger: GGCTGCTGTCCCCTTACACCAAGGGCTCCAGCGTGC...GAGGGTGGGCAAGAGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR CCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGCTCCTAAGTCCTCGATaGTGTCCAGGAGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGLLSPR*CPGGCQ
Trigger: CTGGCAGCCTCCTGGACACCATCGAGGACTTAGGAG...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGCTGCCGGGTTTGTGCTaGACCTTAGACTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGLPGLC*TLDSGQ
Trigger: CTGCCCTGAGTCTAAGGTCCAGCACAAACCCGGCAG...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CCA 90 bp CACGTGTTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGCAGAAGAGTGGCCACTaGGCAGGCACCGGAAATGGC +
Preference number: 4 (lower is better)
Translates to: HVFLLALTEAVAEAGAGVQKSGH*AGTGNG
Trigger: GCCATTTCCGGTGCCTGCCCAGTGGCCACTCTTCTG...CACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAACACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CACGTGTTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGCGTCCTTGGTCCATCTaGGCTAGGACTTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: HVFLLALTEAVAEAGAGVRPWSI*ARTSPS
Trigger: GGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACG...CACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAACACGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp TTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGAGCAGAGCTGCAGCTCTGGCCTaGCCATCCTGGTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: FLLALTEAVAEAGAGVSRAAALA*PSWSLK
Trigger: CTTCAGCGACCAGGATGGCCAGGCCAGAGCTGCAGC...TCTGCTCACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGGGGCACGGTGGCAATaGGGTGACCTAAAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PVPKVQWAPSSQGTGSPAGARWQ*GDLKGS
Trigger: GCTCCCTTTTAGGTCACCCCATTGCCACCGTGCCCC...CGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCACAGGATGGGGACCCTaGGCAAGAGGGGATGGACCC +
Preference number: 4 (lower is better)
Translates to: PMCLQARPWSIWARTSPSTGWGP*ARGDGP
Trigger: GGGTCCATCCCCTCTTGCCCAGGGTCCCCATCCTGT...GGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GTCTTCCATCCACAGCTGCACCTGGAGGCCCCACCCAGGGTCCCCAACGTCCTCCTGCTTGGTACAGGATaGGGACCCTGGGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: VFHPQLHLEAPPRVPNVLLLGTG*GPWARG
Trigger: CCCTCTTGCCCAGGGTCCCCATCCTGTACCAAGCAG...GAGGACGTTGGGGACCCTGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp GTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTACAGGGTGCCAAAGATaGGCACCACCAGGCGAGAGA +
Preference number: 4 (lower is better)
Translates to: VPKVQWAPSSQGTGSPAATGCQR*APPGER
Trigger: TCTCTCGCCTGGTGGTGCTCATCTTTGGCACCCTGT...AGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254901.9
ENST00000378339.7
CDS-3UTR TCA 90 bp GTCTTCCATCCACAGCTGCACCTGGAGGCCCCACCCAGGGTCCCCAACGTCCTCTGTCTCGGGCCTGCGTaGTGTACTCGTCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: VFHPQLHLEAPPRVPNVLCLGPA*CTRRSP
Trigger: AGGAGATCGACGAGTACATCACGCAGGCCCGAGACA...GAGGACGTTGGGGACCCTGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp GTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTTGTCTCGGGCCTGCGTaGTGTACTCGTCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: VPKVQWAPSSQGTGSPAACLGPA*CTRRSP
Trigger: AGGAGATCGACGAGTACATCACGCAGGCCCGAGACA...AGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp GGCGGCAGCTGTGACTGCAGCATTGGCGGCAAGGTTCAGGCCCCTCTTGCCCACTGTCTCGGGCCTGCGTaGTGTACTCGTCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: GGSCDCSIGGKVQAPLAHCLGPA*CTRRSP
Trigger: AGGAGATCGACGAGTACATCACGCAGGCCCGAGACA...GTGGGCAAGAGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR TCA 90 bp CCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTTCAGGTCCTGCATGCTaGAGCTGCGGAGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PKVQWAPSSQGTGSPAAPSGPAC*SCGASL
Trigger: CAGAGAAGCTCCGCAGCTTCAGCATGCAGGACCTGA...AGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp GGGAGGAGGCGACTGCTGGAGGGACAGTCCTTGACCCAAACTACCCCGAGCCCTTGGAGGGACAGTCCTTaGCCCAAACTACCCCGAGCC +
Preference number: 4 (lower is better)
Translates to: GRRRLLEGQSLTQTTPSPWRDSP*PKLPRA
Trigger: GGCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCA...AGGGCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCAGCAGTCGCCTCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp GTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTAGGATGGAGGGTTaGGCAGGGAAAGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: VPKVQWAPSSQGTGSPAAPRMEG*AGKGPD
Trigger: ATCTGGCCCTTTCCCTGCTCAACCCTCCATCCTAGG...AGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp CCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTGCATTTCTCTTTCTCCTTCCCTCCTGGCCCTGACTaGAGCCGTGGCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PLPKEPGAPRLLHFSFSFPPGPD*SRGRSW
Trigger: CCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGG...GAAGGAGAAAGAGAAATGCAGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp TGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTACCTCCTGGCCCTGACTaGAGCCGTGGCAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: CAPFPPCAFRPVLGPSGLPPGPD*SRGRSW
Trigger: CCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGG...TAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp TTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGAGCAGATGTTCCTCCTGGCCCTaGCTGAAGCCGTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FLLALTEAVAEAGAGVSRCSSWP*LKPWQK
Trigger: CTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAACA...TCTGCTCACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp CCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCTGAGAAGCGGATTGCTGGCCGAGGATGCAGCTaGCTGAGGCCGAGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: PNQGEQWKHDRTSEKRIAGRGCS*LRPSGG
Trigger: GCCGCCGCTCGGCCTCAGGCAGCTGCATCCTCGGCC...AGCAATCCGCTTCTCAGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254901.9
ENST00000378339.7
CDS-3UTR GCA 90 bp AGGCACCGGAAATGGCCATCTGCGGGGCCCAGGGGCCTGAGACACCTAGGCTACTTGGGTGCACGAACTTaGGGTAGAGCACGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RHRKWPSAGPRGLRHLGYLGART*GRARWS
Trigger: GCTCCAGCGTGCTCTACCGCAAGTTCGTGCACCCAA...GTAGCCTAGGTGTCTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGCTCTTGTCTCGGGCCTaGGTGATGTACTCGTCGATC +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGLLSRA*VMYSSI
Trigger: GATCGACGAGTACATCACGCAGGCCCGAGACAAGAG...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR GCA 90 bp GCAGCTGTGACTGCAGCATTGGCGGCAAGGTTCAGGCCCCTCTTGCCCACCCTCGGCGGCAGCTGTGACTaGAGCATTGGCGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: AAVTAALAARFRPLLPTLGGSCD*SIGGKV
Trigger: AACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCC...GAGGGTGGGCAAGAGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR GCA 90 bp AGGCACCGGAAATGGCCATCTGCGGGGCCCAGGGGCCTGAGACACCTAGGCTACATCAGGGTCAGGTCCTaGATGCTGAAGCTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: RHRKWPSAGPRGLRHLGYIRVRS*MLKLRS
Trigger: GCTCCGCAGCTTCAGCATGCAGGACCTGACCCTGAT...GTAGCCTAGGTGTCTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTATCAGGGTCAGGTCCTaGATGCTGAAGCTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: VPKVQWAPSSQGTGSPAAIRVRS*MLKLRS
Trigger: GCTCCGCAGCTTCAGCATGCAGGACCTGACCCTGAT...AGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp CCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTGCATTTCTCTTTCTCCTTCCCTCTGCAGGGGCAGTaGGTCCTCGTCCCGGATCAG +
Preference number: 4 (lower is better)
Translates to: PLPKEPGAPRLLHFSFSFPLQGQ*VLVPDQ
Trigger: CTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGG...GAAGGAGAAAGAGAAATGCAGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp CCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTCTCTGTCCGGGAATCTaGCGGGTTTGTGCTGGACCT +
Preference number: 4 (lower is better)
Translates to: PKVQWAPSSQGTGSPAAPLCPGI*RVCAGP
Trigger: AGGTCCAGCACAAACCCGGCAGATTCCCGGACAGAG...AGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp CGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAAGGCGCTTCATCCTTGCTCTaGAGCCTGCGGGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RPWSIWARTSPSLLPNQGASSLL*SLRGWR
Trigger: CCTCCACCCCCGCAGGCTGCAGAGCAAGGATGAAGC...GCCTTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp CCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCTCCCTTTCCCCCATGTaGCTTCAGGCCCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PMCLQARPWSIWARTSPSSLSPM*LQARPW
Trigger: CCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGA...GGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp TCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCAACGTCCTCCCCGTGTaGTCCCTTTCCCCCATGTGC +
Preference number: 4 (lower is better)
Translates to: SSAKGPMGTLFPRNREPRNVLPV*SLSPMC
Trigger: GCACATGGGGGAAAGGGAGCACACGGGGAGGACGTT...GCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp CAGGGCGGGGCTGCAGCGGAACAGCGGTGGAGGCCGAGCAGTCCCCACCTCCTTTATTGGCTCATCCAGTaGCAAAGGTCCAATGGGCAC +
Preference number: 4 (lower is better)
Translates to: QGGAAAEQRWRPSSPHLLYWLIQ*QRSNGH
Trigger: GTGCCCATTGGACCTTTGGCACTGGATGAGCCAATA...AAGGAGGTGGGGACTGCTCGGCCTCCACCGCTGTTCCGCTGCAGCCCCGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GTCTTCCATCCACAGCTGCACCTGGAGGCCCCACCCAGGGTCCCCAACGTCCTCCTCCTAAGTCCTCGATaGTGTCCAGGAGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: VFHPQLHLEAPPRVPNVLLLSPR*CPGGCQ
Trigger: CTGGCAGCCTCCTGGACACCATCGAGGACTTAGGAG...GAGGACGTTGGGGACCCTGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CACGTGTTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGCTCCTAAGTCCTCGATaGTGTCCAGGAGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: HVFLLALTEAVAEAGAGVLLSPR*CPGGCQ
Trigger: CTGGCAGCCTCCTGGACACCATCGAGGACTTAGGAG...CACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAACACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCTGCCGGGTTTGTGCTaGACCTTAGACTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VPKVQWAPSSQGTGSPAALPGLC*TLDSGQ
Trigger: CTGCCCTGAGTCTAAGGTCCAGCACAAACCCGGCAG...AGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CACGTGTTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGAGACACCTAGGCTACTaGCACAGTGTGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: HVFLLALTEAVAEAGAGVRHLGY*HSVEQG
Trigger: CCCCTGCTCCACACTGTGCCAGTAGCCTAGGTGTCT...CACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAACACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GGGCAGGCACCGGAAATGGCCATCTGCGGGGCCCAGGGGCCTGAGACACCTAGGAACCAAGGCGAGCAGTaGAAACACGACAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: GQAPEMAICGAQGPETPRNQGEQ*KHDRTS
Trigger: AGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTT...CCTAGGTGTCTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGGTGCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GGGAGGAGGCGACTGCTGGAGGGACAGTCCTTGACCCAAACTACCCCGAGCCCTCTGCTTGGTACAGGATaGGGACCCTGGGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: GRRRLLEGQSLTQTTPSPLLGTG*GPWARG
Trigger: CCCTCTTGCCCAGGGTCCCCATCCTGTACCAAGCAG...AGGGCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCAGCAGTCGCCTCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCAGGGCCCAGTCTGCTTaGTACAGGATGGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: PMCLQARPWSIWARTSPSRAQSA*YRMGTL
Trigger: CAGGGTCCCCATCCTGTACCAAGCAGACTGGGCCCT...GGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp TTGGCGGCAGCTGTGACTGCAGCATTGGCGGCAAGGTTCAGGCCCCTCTTGCCCTCAGGTCCTGCATGCTaGAGCTGCGGAGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LAAAVTAALAARFRPLLPSGPAC*SCGASL
Trigger: CAGAGAAGCTCCGCAGCTTCAGCATGCAGGACCTGA...GGGCAAGAGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR GCA 90 bp CCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGCTCTTGTCTCGGGCCTaGGTGATGTACTCGTCGATC +
Preference number: 4 (lower is better)
Translates to: PVPKVQWAPSSQGTGSPALLSRA*VMYSSI
Trigger: GATCGACGAGTACATCACGCAGGCCCGAGACAAGAG...CGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp TCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGTTCAGGCCCCTCTTaGCCACCCTCATCATGGTCT +
Preference number: 4 (lower is better)
Translates to: SSAKGPMGTLFPRNREPRGSGPS*PPSSWS
Trigger: AGACCATGATGAGGGTGGGCAAGAGGGGCCTGAACC...GCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GCCCTTGGCGGCAGCTGTGACTGCAGCATTGGCGGCAAGGTTCAGGCCCCTCTTGGTTCAGGCCCCTCTTaGCCACCCTCATCATGGTCT +
Preference number: 4 (lower is better)
Translates to: ALGGSCDCSIGGKVQAPLGSGPS*PPSSWS
Trigger: AGACCATGATGAGGGTGGGCAAGAGGGGCCTGAACC...AAGAGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCCAAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR GCA 90 bp CTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAGGTTCAGGCCCCTCTTaGCCACCCTCATCATGGTCT +
Preference number: 4 (lower is better)
Translates to: LQARPWSIWARTSPSLLPGSGPS*PPSSWS
Trigger: AGACCATGATGAGGGTGGGCAAGAGGGGCCTGAACC...TGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GCAGCTGTGACTGCAGCATTGGCGGCAAGGTTCAGGCCCCTCTTGCCCACCCTCATCAGGGTCAGGTCCTaGATGCTGAAGCTGCGGAGC +
Preference number: 4 (lower is better)
Translates to: AAVTAALAARFRPLLPTLIRVRS*MLKLRS
Trigger: GCTCCGCAGCTTCAGCATGCAGGACCTGACCCTGAT...GAGGGTGGGCAAGAGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR GCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGAATCTGCCGGGTTTGTaGTGGACCTTAGACTCAGGG +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGNLPGL*WTLDSG
Trigger: CCCTGAGTCTAAGGTCCAGCACAAACCCGGCAGATT...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR GCA 90 bp ATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGCCGGAAATGGCCATCTaGGGGGCCCAGGGGCCTGAG +
Preference number: 4 (lower is better)
Translates to: IGSSSAKGPMGTLFPRNRPEMAI*GAQGPE
Trigger: CTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGG...CCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAAAACGTCCTCCCCGTGTaGTCCCTTTCCCCCATGTGC +
Preference number: 4 (lower is better)
Translates to: ARPWSIWARTSPSLLPNQNVLPV*SLSPMC
Trigger: GCACATGGGGGAAAGGGAGCACACGGGGAGGACGTT...TTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp CCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGAGCCCCGCGGCTCCTaGATTTCTCTTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PVPKVQWAPSSQGTGSPAEPRGS*ISLSPS
Trigger: TGAAGGAGAAAGAGAAATGCAGGAGCCGCGGGGCTC...CGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp TTCCCCCTCCCTGCTCCCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCGCACGCTGGAGCCCTTaGTGTAAGGGGACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FPLPAPKPRRAVETRQDLARWSP*CKGTAA
Trigger: GGCTGCTGTCCCCTTACACCAAGGGCTCCAGCGTGC...GAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGGGAGCAGGGAGGGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGCTTGTTGGACAGCGTTaGGTGCACGAACTTGCGGTA +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGLVGQR*VHELAV
Trigger: TACCGCAAGTTCGTGCACCCAACGCTGTCCAACAAG...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGTCTCCTTCTCCTTGTTaGACAGCGTTGGGTGCACGA +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGSPSPC*TALGAR
Trigger: TCGTGCACCCAACGCTGTCCAACAAGGAGAAGGAGA...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CCA 90 bp TCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCCTCCTAAGTCCTCGATaGTGTCCAGGAGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SSAKGPMGTLFPRNREPRLLSPR*CPGGCQ
Trigger: CTGGCAGCCTCCTGGACACCATCGAGGACTTAGGAG...GCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGTGGGTTTGGCCCTCTTaGGAGCTTTGTCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGWVWPS*ELCLPC
Trigger: ACATGGGAGACAAAGCTCCCAAGAGGGCCAAACCCA...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGGGGTCTTCAGTGTCTTaGAAGCCAGTGGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGGSSVS*KPVAQL
Trigger: AAGCTGAGCCACTGGCTTCCAAGACACTGAAGACCC...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGCAGAGGTCTTCTTCTTaGGCCGGGTCTTCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGQRSSS*AGSSVS
Trigger: AGACACTGAAGACCCGGCCCAAGAAGAAGACCTCTG...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CCA 90 bp GCACGGTGGCAATGGGGTGACCTAAAAGGGAGCAAGGTCATAGGAGCAGGTGAGGGCAGGCACCGGAAATaGCCATCTGCGGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ARWQWGDLKGSKVIGAGEGRHRK*PSAGPR
Trigger: CCTGGGCCCCGCAGATGGCCATTTCCGGTGCCTGCC...CTCACCTGCTCCTATGACCTTGCTCCCTTTTAGGTCACCCCATTGCCACCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGAGAAGCGGATTGCTATaGGCTTCAGCAAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGRSGLL*ASARHW
Trigger: CCAGTGCCTTGCTGAAGCCCATAGCAATCCGCTTCT...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGAACCAAGGCGAGCAGTaGAAACACGACAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGNQGEQ*KHDRTS
Trigger: AGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTT...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAAGGGGGCACGGTGGCAATaGGGTGACCTAAAAGGGAGC +
Preference number: 4 (lower is better)
Translates to: PVLGPSGLGLPPPCSQTKGARWQ*GDLKGS
Trigger: GCTCCCTTTTAGGTCACCCCATTGCCACCGTGCCCC...CTTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp TTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGAGCAGAAGCCCAGGGGCACGGTaGCAATGGGGTGACCTAAAA +
Preference number: 4 (lower is better)
Translates to: FLLALTEAVAEAGAGVSRSPGAR*QWGDLK
Trigger: TTTTAGGTCACCCCATTGCCACCGTGCCCCTGGGCT...TCTGCTCACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GCCAGAGGTCTTCTTCTTGGGCCGGGTCTTCAGTGTCTTGGAAGCCAGTGGCTCTCTGACAGCACCCCCTaGCCCTTGGCGGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: ARGLLLGPGLQCLGSQWLSDSTP*PLAAAV
Trigger: CACAGCTGCCGCCAAGGGCCAGGGGGTGCTGTCAGA...GAGCCACTGGCTTCCAAGACACTGAAGACCCGGCCCAAGAAGAAGACCTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613650.1
CDS-3UTR TCA 90 bp CAGAGTTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTGAGGATGCAGCTGCCTaGGGCCGAGCGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: QSLVYWLIQCQRSNGHPLEDAAA*GRAAAA
Trigger: CGCCGCCGCCGCTCGGCCTCAGGCAGCTGCATCCTC...AAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254901.9
ENST00000378339.7
CDS-3UTR TCA 90 bp TGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGCGTCTCGGCCGTGGTaGAGAAGGCAAAGACGATCC +
Preference number: 4 (lower is better)
Translates to: CAPFPPCAFRPVLGPSGLASRPW*RRQRRS
Trigger: GGATCGTCTTTGCCTTCTTCACCACGGCCGAGACGC...TAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp TCCCCGTGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTTCAGGTCCTGCATGCTaGAGCTGCGGAGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SPCAPFPPCAFRPVLGPSSGPAC*SCGASL
Trigger: CAGAGAAGCTCCGCAGCTTCAGCATGCAGGACCTGA...AGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACACGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp CCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCACGGTGGCAATGGGGTaGCCTAAAAGGGAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: PMCLQARPWSIWARTSPSTVAMG*PKREQG
Trigger: ACCTTGCTCCCTTTTAGGTCACCCCATTGCCACCGT...GGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp GGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAAGCAGGGGTGGGCCCTaGGGAGCACGGGAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: GLLAHPVPKVQWAPSSQGSRGGP*GARESS
Trigger: GCTGGACTCCCGTGCTCCTCAGGGCCCACCCCTGCT...TCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp CCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTCTTGTCTCGGGCCTaGGTGATGTACTCGTCGATC +
Preference number: 4 (lower is better)
Translates to: PMCLQARPWSIWARTSPSLLSRA*VMYSSI
Trigger: GATCGACGAGTACATCACGCAGGCCCGAGACAAGAG...GGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp CCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGAATCTGCCGGGTTTGTaGTGGACCTTAGACTCAGGG +
Preference number: 4 (lower is better)
Translates to: PVPKVQWAPSSQGTGSPANLPGL*WTLDSG
Trigger: CCCTGAGTCTAAGGTCCAGCACAAACCCGGCAGATT...CGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp AGGCACCGGAAATGGCCATCTGCGGGGCCCAGGGGCCTGAGACACCTAGGCTACCTTGTTGGACAGCGTTaGGTGCACGAACTTGCGGTA +
Preference number: 4 (lower is better)
Translates to: RHRKWPSAGPRGLRHLGYLVGQR*VHELAV
Trigger: TACCGCAAGTTCGTGCACCCAACGCTGTCCAACAAG...GTAGCCTAGGTGTCTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGGTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CTCTGCAGGGGCAGTGCGTCCTCGTCCCGGATCAGGGTCAGGTCCTGCATGCTGTCTCCTTCTCCTTGTTaGACAGCGTTGGGTGCACGA +
Preference number: 4 (lower is better)
Translates to: LCRGSASSSRIRVRSCMLSPSPC*TALGAR
Trigger: TCGTGCACCCAACGCTGTCCAACAAGGAGAAGGAGA...CAGCATGCAGGACCTGACCCTGATCCGGGACGAGGACGCACTGCCCCTGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR CCA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGTGCCCACCCTCATCATaGTCTCATAGCTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGCPPSS*SHSSCL
Trigger: GAGACAAGAGCTATGAGACCATGATGAGGGTGGGCA...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CCA 90 bp CCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAAGCTGCCGGGTTTGTGCTaGACCTTAGACTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PVLGPSGLGLPPPCSQTKLPGLC*TLDSGQ
Trigger: CTGCCCTGAGTCTAAGGTCCAGCACAAACCCGGCAG...CTTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTGGGTCTTCAGTGTCTTaGAAGCCAGTGGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: VPKVQWAPSSQGTGSPAAGSSVS*KPVAQL
Trigger: AAGCTGAGCCACTGGCTTCCAAGACACTGAAGACCC...AGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTCAGAGGTCTTCTTCTTaGGCCGGGTCTTCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: PKVQWAPSSQGTGSPAAPQRSSS*AGSSVS
Trigger: AGACACTGAAGACCCGGCCCAAGAAGAAGACCTCTG...AGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTGCATTTCTCTTTCTCCTTCCAGAAGAGTGGCCACTaGGCAGGCACCGGAAATGGC +
Preference number: 4 (lower is better)
Translates to: PLPKEPGAPRLLHFSFSFQKSGH*AGTGNG
Trigger: GCCATTTCCGGTGCCTGCCCAGTGGCCACTCTTCTG...GAAGGAGAAAGAGAAATGCAGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCATCAGTCCTCAGCCTCTaGTCCACCCTCTACCCTCAA +
Preference number: 4 (lower is better)
Translates to: LQARPWSIWARTSPSLLPSVLSL*STLYPQ
Trigger: TTGAGGGTAGAGGGTGGACCAGAGGCTGAGGACTGA...TGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCTGAGAAGCGGATTGCTGCAGCGGAACAGCGGTaGAGGCCGAGCAGTCCCCAC +
Preference number: 4 (lower is better)
Translates to: PNQGEQWKHDRTSEKRIAAAEQR*RPSSPH
Trigger: GTGGGGACTGCTCGGCCTCCACCGCTGTTCCGCTGC...AGCAATCCGCTTCTCAGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp TCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGCTCAGAGCCTAGGATaGAGGGTTGAGCAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SSAKGPMGTLFPRNREPRAQSLG*RVEQGK
Trigger: CTTTCCCTGCTCAACCCTCCATCCTAGGCTCTGAGC...GCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAGCTCAGAGCCTAGGATaGAGGGTTGAGCAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: LQARPWSIWARTSPSLLPAQSLG*RVEQGK
Trigger: CTTTCCCTGCTCAACCCTCCATCCTAGGCTCTGAGC...TGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp TGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTACTGCTTGGTACAGGATaGGGACCCTGGGCAAGAGGG +
Preference number: 4 (lower is better)
Translates to: CAPFPPCAFRPVLGPSGLLLGTG*GPWARG
Trigger: CCCTCTTGCCCAGGGTCCCCATCCTGTACCAAGCAG...TAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp TTCCCCCTCCCTGCTCCCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCTGTCTCGGGCCTGCGTaGTGTACTCGTCGATCTCCT +
Preference number: 4 (lower is better)
Translates to: FPLPAPKPRRAVETRQDLCLGPA*CTRRSP
Trigger: AGGAGATCGACGAGTACATCACGCAGGCCCGAGACA...GAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGGGAGCAGGGAGGGGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp GGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGATGGAGGGGCTCAAGCTaGGTCGCCCCCGCCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GLLAHPVPKVQWAPSSQGWRGSS*VAPARG
Trigger: ACCTCTGGCGGGGGCGACTCAGCTTGAGCCCCTCCA...TCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp CCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTGCATTTCTCTTTCTCCTTCCCTAGGATGGAGGGTTaGGCAGGGAAAGGGCCAGAT +
Preference number: 4 (lower is better)
Translates to: PLPKEPGAPRLLHFSFSFPRMEG*AGKGPD
Trigger: ATCTGGCCCTTTCCCTGCTCAACCCTCCATCCTAGG...GAAGGAGAAAGAGAAATGCAGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp CCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCTGAGAAGCGGATTGCTCCTCTGCAGGGGCAGTaGGTCCTCGTCCCGGATCAG +
Preference number: 4 (lower is better)
Translates to: PNQGEQWKHDRTSEKRIAPLQGQ*VLVPDQ
Trigger: CTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGG...AGCAATCCGCTTCTCAGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp ACTCGTCGATCTCCTTCTCCTTGTTGGACAGCGTTGGGTGCACGAACTTGCGGTCCTCTGCAGGGGCAGTaGGTCCTCGTCCCGGATCAG +
Preference number: 4 (lower is better)
Translates to: TRRSPSPCWTALGARTCGPLQGQ*VLVPDQ
Trigger: CTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGG...ACCGCAAGTTCGTGCACCCAACGCTGTCCAACAAGGAGAAGGAGATCGACGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR GCA 90 bp GGGAGGAGGCGACTGCTGGAGGGACAGTCCTTGACCCAAACTACCCCGAGCCCTAATCTGCCGGGTTTGTaGTGGACCTTAGACTCAGGG +
Preference number: 4 (lower is better)
Translates to: GRRRLLEGQSLTQTTPSPNLPGL*WTLDSG
Trigger: CCCTGAGTCTAAGGTCCAGCACAAACCCGGCAGATT...AGGGCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCAGCAGTCGCCTCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp TGCAGCTCTGGCCTGGCCATCCTGGTCGCTGAAGCACAGGCCAATCCCTGTCTTCTCTGTCCGGGAATCTaGCGGGTTTGTGCTGGACCT +
Preference number: 4 (lower is better)
Translates to: CSSGLAILVAEAQANPCLLCPGI*RVCAGP
Trigger: AGGTCCAGCACAAACCCGGCAGATTCCCGGACAGAG...AAGACAGGGATTGGCCTGTGCTTCAGCGACCAGGATGGCCAGGCCAGAGCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp ATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGCTTCATCCTTGCTCTaGAGCCTGCGGGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: IGSSSAKGPMGTLFPRNRASSLL*SLRGWR
Trigger: CCTCCACCCCCGCAGGCTGCAGAGCAAGGATGAAGC...CCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp CGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAAGGCGAGCCCCGCGGCTCCTaGATTTCTCTTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RPWSIWARTSPSLLPNQGEPRGS*ISLSPS
Trigger: TGAAGGAGAAAGAGAAATGCAGGAGCCGCGGGGCTC...GCCTTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCTCTCCTTCTCCTTGTTaGACAGCGTTGGGTGCACGA +
Preference number: 4 (lower is better)
Translates to: PMCLQARPWSIWARTSPSSPSPC*TALGAR
Trigger: TCGTGCACCCAACGCTGTCCAACAAGGAGAAGGAGA...GGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCGGGTCTTCAGTGTCTTaGAAGCCAGTGGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: PMCLQARPWSIWARTSPSGSSVS*KPVAQL
Trigger: AAGCTGAGCCACTGGCTTCCAAGACACTGAAGACCC...GGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCACAGAGGTCTTCTTCTTaGGCCGGGTCTTCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: LQARPWSIWARTSPSLLPQRSSS*AGSSVS
Trigger: AGACACTGAAGACCCGGCCCAAGAAGAAGACCTCTG...TGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTGCATTTCTCTTTCTCCTTCCTTCAGGCCCGTCCTTaGTCCATCTGGGCTAGGACT +
Preference number: 4 (lower is better)
Translates to: PLPKEPGAPRLLHFSFSFLQARP*SIWART
Trigger: AGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAG...GAAGGAGAAAGAGAAATGCAGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp TCCCCGTGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGCTCAGAGCCTAGGATaGAGGGTTGAGCAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SPCAPFPPCAFRPVLGPSAQSLG*RVEQGK
Trigger: CTTTCCCTGCTCAACCCTCCATCCTAGGCTCTGAGC...AGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACACGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GGGCAGGCACCGGAAATGGCCATCTGCGGGGCCCAGGGGCCTGAGACACCTAGGCAGAGTTTGGTTTATTaGCTCATCCAGTGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: GQAPEMAICGAQGPETPRQSLVY*LIQCQR
Trigger: CCTTTGGCACTGGATGAGCCAATAAACCAAACTCTG...CCTAGGTGTCTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGGTGCCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GCCCCTCTTGCCCACCCTCATCATGGTCTCATAGCTCTTGTCTCGGGCCTGCGTCTCTTGTCTCGGGCCTaGGTGATGTACTCGTCGATC +
Preference number: 4 (lower is better)
Translates to: APLAHPHHGLIALVSGLRLLSRA*VMYSSI
Trigger: GATCGACGAGTACATCACGCAGGCCCGAGACAAGAG...ACGCAGGCCCGAGACAAGAGCTATGAGACCATGATGAGGGTGGGCAAGAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR GCA 90 bp GCACGGTGGCAATGGGGTGACCTAAAAGGGAGCAAGGTCATAGGAGCAGGTGAGGGCGGCAGCTGTGACTaGAGCATTGGCGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: ARWQWGDLKGSKVIGAGEGGSCD*SIGGKV
Trigger: AACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCC...CTCACCTGCTCCTATGACCTTGCTCCCTTTTAGGTCACCCCATTGCCACCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GCACGGTGGCAATGGGGTGACCTAAAAGGGAGCAAGGTCATAGGAGCAGGTGAGCTGAGGCTTCATCCTTaGTCTGCAGCCTGCGGGGGT +
Preference number: 4 (lower is better)
Translates to: ARWQWGDLKGSKVIGAGELRLHP*SAACGG
Trigger: ACCCCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAG...CTCACCTGCTCCTATGACCTTGCTCCCTTTTAGGTCACCCCATTGCCACCGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp AATGAGGTGCCAGAGTTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGGGGCAGGGCGGGGCTaGAGCGGAACAGCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: NEVPEFGLLAHPVPKVQWGAGRG*SGTAVE
Trigger: CTCCACCGCTGTTCCGCTGCAGCCCCGCCCTGCCCC...CCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTGGCACCTCATT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000254901.9
CDS-3UTR GCA 90 bp ATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGTCCCTTTCCCCCATGTaGCTTCAGGCCCGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: IGSSSAKGPMGTLFPRNRSLSPM*LQARPW
Trigger: CCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGA...CCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp GCACGGTGGCAATGGGGTGACCTAAAAGGGAGCAAGGTCATAGGAGCAGGTGAGTCTTCCATCCACAGCTaGACCTGGAGGCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: ARWQWGDLKGSKVIGAGESSIHS*TWRPHP
Trigger: TGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGA...CTCACCTGCTCCTATGACCTTGCTCCCTTTTAGGTCACCCCATTGCCACCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GTCGCCCCCGCCAGAGGTCTTCTTCTTGGGCCGGGTCTTCAGTGTCTTGGAAGCCTTGTTGGACAGCGTTaGGTGCACGAACTTGCGGTA +
Preference number: 4 (lower is better)
Translates to: VAPARGLLLGPGLQCLGSLVGQR*VHELAV
Trigger: TACCGCAAGTTCGTGCACCCAACGCTGTCCAACAAG...GCTTCCAAGACACTGAAGACCCGGCCCAAGAAGAAGACCTCTGGCGGGGGCGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613650.1
CDS-3UTR CCA 90 bp TCCCCGTGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTTGGGTTTGGCCCTCTTaGGAGCTTTGTCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: SPCAPFPPCAFRPVLGPSWVWPS*ELCLPC
Trigger: ACATGGGAGACAAAGCTCCCAAGAGGGCCAAACCCA...AGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACACGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp TCCCCGTGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGTCTTCAGTGTCTTaGAAGCCAGTGGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SPCAPFPPCAFRPVLGPSGSSVS*KPVAQL
Trigger: AAGCTGAGCCACTGGCTTCCAAGACACTGAAGACCC...AGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACACGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAAGGCAGAAGCGGATTGCTATaGGCTTCAGCAAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: RPWSIWARTSPSLLPNQGRSGLL*ASARHW
Trigger: CCAGTGCCTTGCTGAAGCCCATAGCAATCCGCTTCT...GCCTTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp GCACGGTGGCAATGGGGTGACCTAAAAGGGAGCAAGGTCATAGGAGCAGGTGAGTCAGGTCCTGCATGCTaGAGCTGCGGAGCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: ARWQWGDLKGSKVIGAGESGPAC*SCGASL
Trigger: CAGAGAAGCTCCGCAGCTTCAGCATGCAGGACCTGA...CTCACCTGCTCCTATGACCTTGCTCCCTTTTAGGTCACCCCATTGCCACCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp CTCCCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCTGAGAAGCGGATTTGTTCCTCCTGGCCCTaGCTGAAGCCGTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LPNQGEQWKHDRTSEKRICSSWP*LKPWQK
Trigger: CTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAACA...AATCCGCTTCTCAGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp CCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCTGAGAAGCGGATTGCTTGTTCCTCCTGGCCCTaGCTGAAGCCGTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PNQGEQWKHDRTSEKRIACSSWP*LKPWQK
Trigger: CTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAACA...AGCAATCCGCTTCTCAGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp ACAGGACCTCTGAGAAGCGGATTGCTATGGGCTTCAGCAAGGCACTGGGTGGGTCTCTGTCCGGGAATCTaGCGGGTTTGTGCTGGACCT +
Preference number: 4 (lower is better)
Translates to: TGPLRSGLLWASARHWVGLCPGI*RVCAGP
Trigger: AGGTCCAGCACAAACCCGGCAGATTCCCGGACAGAG...ACCCACCCAGTGCCTTGCTGAAGCCCATAGCAATCCGCTTCTCAGAGGTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp CGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAAGGCTATTGGCTCATCCAGTaGCAAAGGTCCAATGGGCAC +
Preference number: 4 (lower is better)
Translates to: RPWSIWARTSPSLLPNQGYWLIQ*QRSNGH
Trigger: GTGCCCATTGGACCTTTGGCACTGGATGAGCCAATA...GCCTTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GCCAGAGTTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCGCACGCTGGAGCCCTTaGTGTAAGGGGACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: ARVWFIGSSSAKGPMGTLARWSP*CKGTAA
Trigger: GGCTGCTGTCCCCTTACACCAAGGGCTCCAGCGTGC...GAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp TTCCCCCTCCCTGCTCCCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCCTTGTTGGACAGCGTTaGGTGCACGAACTTGCGGTA +
Preference number: 4 (lower is better)
Translates to: FPLPAPKPRRAVETRQDLLVGQR*VHELAV
Trigger: TACCGCAAGTTCGTGCACCCAACGCTGTCCAACAAG...GAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGGGAGCAGGGAGGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp TGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTATCTCCTTCTCCTTGTTaGACAGCGTTGGGTGCACGA +
Preference number: 4 (lower is better)
Translates to: CAPFPPCAFRPVLGPSGLSPSPC*TALGAR
Trigger: TCGTGCACCCAACGCTGTCCAACAAGGAGAAGGAGA...TAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp ACAGGACCTCTGAGAAGCGGATTGCTATGGGCTTCAGCAAGGCACTGGGTGGGTCTGCCGGGTTTGTGCTaGACCTTAGACTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TGPLRSGLLWASARHWVGLPGLC*TLDSGQ
Trigger: CTGCCCTGAGTCTAAGGTCCAGCACAAACCCGGCAG...ACCCACCCAGTGCCTTGCTGAAGCCCATAGCAATCCGCTTCTCAGAGGTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GCACGGTGGCAATGGGGTGACCTAAAAGGGAGCAAGGTCATAGGAGCAGGTGAGAGACACCTAGGCTACTaGCACAGTGTGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ARWQWGDLKGSKVIGAGERHLGY*HSVEQG
Trigger: CCCCTGCTCCACACTGTGCCAGTAGCCTAGGTGTCT...CTCACCTGCTCCTATGACCTTGCTCCCTTTTAGGTCACCCCATTGCCACCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCTGAGAAGCGGATTGCTCAGAAGAGTGGCCACTaGGCAGGCACCGGAAATGGC +
Preference number: 4 (lower is better)
Translates to: PNQGEQWKHDRTSEKRIAQKSGH*AGTGNG
Trigger: GCCATTTCCGGTGCCTGCCCAGTGGCCACTCTTCTG...AGCAATCCGCTTCTCAGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTGCATTTCTCTTTCTCCTTCAGAAGCGGATTGCTATaGGCTTCAGCAAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: PLPKEPGAPRLLHFSFSFRSGLL*ASARHW
Trigger: CCAGTGCCTTGCTGAAGCCCATAGCAATCCGCTTCT...GAAGGAGAAAGAGAAATGCAGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp ACAGGACCTCTGAGAAGCGGATTGCTATGGGCTTCAGCAAGGCACTGGGTGGGTACGGTGGCAATGGGGTaGCCTAAAAGGGAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: TGPLRSGLLWASARHWVGTVAMG*PKREQG
Trigger: ACCTTGCTCCCTTTTAGGTCACCCCATTGCCACCGT...ACCCACCCAGTGCCTTGCTGAAGCCCATAGCAATCCGCTTCTCAGAGGTCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp ATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTaGATTTCTCTTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: IGSSSAKGPMGTLFPRNREPRGS*ISLSPS
Trigger: TGAAGGAGAAAGAGAAATGCAGGAGCCGCGGGGCTC...CCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp TGCAGCTCTGGCCTGGCCATCCTGGTCGCTGAAGCACAGGCCAATCCCTGTCTTTATTGGCTCATCCAGTaGCAAAGGTCCAATGGGCAC +
Preference number: 4 (lower is better)
Translates to: CSSGLAILVAEAQANPCLYWLIQ*QRSNGH
Trigger: GTGCCCATTGGACCTTTGGCACTGGATGAGCCAATA...AAGACAGGGATTGGCCTGTGCTTCAGCGACCAGGATGGCCAGGCCAGAGCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GCCAGAGGTCTTCTTCTTGGGCCGGGTCTTCAGTGTCTTGGAAGCCAGTGGCTCTCTCCTTCTCCTTGTTaGACAGCGTTGGGTGCACGA +
Preference number: 4 (lower is better)
Translates to: ARGLLLGPGLQCLGSQWLSPSPC*TALGAR
Trigger: TCGTGCACCCAACGCTGTCCAACAAGGAGAAGGAGA...GAGCCACTGGCTTCCAAGACACTGAAGACCCGGCCCAAGAAGAAGACCTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613650.1
CDS-3UTR CCA 90 bp CCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTGCATTTCTCTTTCTCCTTCTGCCCACCCTCATCATaGTCTCATAGCTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: PLPKEPGAPRLLHFSFSFCPPSS*SHSSCL
Trigger: GAGACAAGAGCTATGAGACCATGATGAGGGTGGGCA...GAAGGAGAAAGAGAAATGCAGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp TGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTATGCCCACCCTCATCATaGTCTCATAGCTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: CAPFPPCAFRPVLGPSGLCPPSS*SHSSCL
Trigger: GAGACAAGAGCTATGAGACCATGATGAGGGTGGGCA...TAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GCCAGAGTTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCCGTCCTTGGTCCATCTaGGCTAGGACTTCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: ARVWFIGSSSAKGPMGTLRPWSI*ARTSPS
Trigger: GGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACG...GAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCTGAGAAGCGGATTGCTCTTCAGGCCCGTCCTTaGTCCATCTGGGCTAGGACT +
Preference number: 4 (lower is better)
Translates to: PNQGEQWKHDRTSEKRIALQARP*SIWART
Trigger: AGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAG...AGCAATCCGCTTCTCAGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GCCAGAGTTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCAGGGCCCAGTCTGCTTaGTACAGGATGGGGACCCTG +
Preference number: 4 (lower is better)
Translates to: ARVWFIGSSSAKGPMGTLRAQSA*YRMGTL
Trigger: CAGGGTCCCCATCCTGTACCAAGCAGACTGGGCCCT...GAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp TTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGAGCAGACAGAGTTTGGTTTATTaGCTCATCCAGTGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: FLLALTEAVAEAGAGVSRQSLVY*LIQCQR
Trigger: CCTTTGGCACTGGATGAGCCAATAAACCAAACTCTG...TCTGCTCACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp CCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCTGAGAAGCGGATTGCTACACGACAGGACCTCTaGGAAGCGGATTGCTATGGG +
Preference number: 4 (lower is better)
Translates to: PNQGEQWKHDRTSEKRIATRQDL*EADCYG
Trigger: CCCATAGCAATCCGCTTCTCAGAGGTCCTGTCGTGT...AGCAATCCGCTTCTCAGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR TCA 90 bp CAGAGTTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTGGCCATCCTGGTCGCTaGAGCACAGGCCAATCCCTG +
Preference number: 4 (lower is better)
Translates to: QSLVYWLIQCQRSNGHPLGHPGR*STGQSL
Trigger: CAGGGATTGGCCTGTGCTTCAGCGACCAGGATGGCC...AAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp ATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGAATCTGCCGGGTTTGTaGTGGACCTTAGACTCAGGG +
Preference number: 4 (lower is better)
Translates to: IGSSSAKGPMGTLFPRNRNLPGL*WTLDSG
Trigger: CCCTGAGTCTAAGGTCCAGCACAAACCCGGCAGATT...CCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp ATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGTGGGTTTGGCCCTCTTaGGAGCTTTGTCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: IGSSSAKGPMGTLFPRNRWVWPS*ELCLPC
Trigger: ACATGGGAGACAAAGCTCCCAAGAGGGCCAAACCCA...CCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp ACAGGACCTCTGAGAAGCGGATTGCTATGGGCTTCAGCAAGGCACTGGGTGGGTAACCAAGGCGAGCAGTaGAAACACGACAGGACCTCT +
Preference number: 4 (lower is better)
Translates to: TGPLRSGLLWASARHWVGNQGEQ*KHDRTS
Trigger: AGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTT...ACCCACCCAGTGCCTTGCTGAAGCCCATAGCAATCCGCTTCTCAGAGGTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
3UTR CAA 72 bp GTCTTGGAAGCCAGTGGCTCAGCTTTGGGCGCTTTTTaGATGGGTTTGGCCCTCTTGGGAGCTTTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: VLEASGSALGAF*MGLALLGALSP
Trigger: GGGAGACAAAGCTCCCAAGAGGGCCAAACCCATCAAAAAAGCGCCCAAAGCTGAGCCACTGGCTTCCAAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613650.1
CDS-3UTR TCA 90 bp GGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACACGACAGGACCTCTaGGAAGCGGATTGCTATGGG +
Preference number: 4 (lower is better)
Translates to: GLLAHPVPKVQWAPSSQGTRQDL*EADCYG
Trigger: CCCATAGCAATCCGCTTCTCAGAGGTCCTGTCGTGT...TCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp CAGAGTTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTGGCGGCAGCTGTGACTaGAGCATTGGCGGCAAGGTT +
Preference number: 4 (lower is better)
Translates to: QSLVYWLIQCQRSNGHPLGGSCD*SIGGKV
Trigger: AACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCC...AAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR GCA 90 bp CAGAGTTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTAAAAGAGCCCCCAGCTaGAGCTCTGGCCTGGCCATC +
Preference number: 4 (lower is better)
Translates to: QSLVYWLIQCQRSNGHPLKRAPS*SSGLAI
Trigger: GATGGCCAGGCCAGAGCTGCAGCTGGGGGCTCTTTT...AAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCTGAGAAGCGGATTGCTTGGGTTTGGCCCTCTTaGGAGCTTTGTCTCCCATGT +
Preference number: 4 (lower is better)
Translates to: PNQGEQWKHDRTSEKRIAWVWPS*ELCLPC
Trigger: ACATGGGAGACAAAGCTCCCAAGAGGGCCAAACCCA...AGCAATCCGCTTCTCAGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp CCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCTGAGAAGCGGATTGCTTGCCCACCCTCATCATaGTCTCATAGCTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: PNQGEQWKHDRTSEKRIACPPSS*SHSSCL
Trigger: GAGACAAGAGCTATGAGACCATGATGAGGGTGGGCA...AGCAATCCGCTTCTCAGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GTACTCGTCGATCTCCTTCTCCTTGTTGGACAGCGTTGGGTGCACGAACTTGCGTGCCCACCCTCATCATaGTCTCATAGCTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: VLVDLLLLVGQRWVHELACPPSS*SHSSCL
Trigger: GAGACAAGAGCTATGAGACCATGATGAGGGTGGGCA...CGCAAGTTCGTGCACCCAACGCTGTCCAACAAGGAGAAGGAGATCGACGAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR CCA 90 bp CAGAGTTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTAGACACCTAGGCTACTaGCACAGTGTGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QSLVYWLIQCQRSNGHPLRHLGY*HSVEQG
Trigger: CCCCTGCTCCACACTGTGCCAGTAGCCTAGGTGTCT...AAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CCA 90 bp GCACGGTGGCAATGGGGTGACCTAAAAGGGAGCAAGGTCATAGGAGCAGGTGAGCAGAGTTTGGTTTATTaGCTCATCCAGTGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: ARWQWGDLKGSKVIGAGEQSLVY*LIQCQR
Trigger: CCTTTGGCACTGGATGAGCCAATAAACCAAACTCTG...CTCACCTGCTCCTATGACCTTGCTCCCTTTTAGGTCACCCCATTGCCACCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS GCA 90 bp TCCAGGAGGCTGCCAGGGCTGGGTCGGAGGCGGCCGTCAGGCCTCTaGAGGGGCAGTGCGTCCTCGTCCCGGATCAGGGTCAGGTCCTGC +
Preference number: 5 (lower is better)
Translates to: SRRLPGLGRRRPSGL*RGSASSSRIRVRSC
Trigger: GCAGGACCTGACCCTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCGCCTCCGACCCAGCCCTGGCAGCCTCCTGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000504163.1
ENST00000506158.5
ENST00000507635.5
CDS GCA 90 bp CTGCCAGGGCTGGGTCGGAGGGCCGTCAGGCCTCTGCAGGGGCAGTaGGTCCTCGTCCCGGATCAGGGTCAGGTCCTGCATGCTGAAGCT +
Preference number: 5 (lower is better)
Translates to: LPGLGRRAVRPLQGQ*VLVPDQGQVLHAEA
Trigger: AGCTTCAGCATGCAGGACCTGACCCTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCCTCCGACCCAGCCCTGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613650.1
CDS GCA 90 bp TCAGGGCAGGGTCATCTCCTAAGTCCTCGATGGTGTCCAGGAGGCTaGCAGGGCTGGGTCGGAGGCGGCCGTCAGGCCTCTGCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: SGQGHLLSPRWCPGG*QGWVGGGRQASAGA
Trigger: TGCCCCTGCAGAGGCCTGACGGCCGCCTCCGACCCAGCCCTGGCAGCCTCCTGGACACCATCGAGGACTTAGGAGATGACCCTGCCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000504163.1
ENST00000506158.5
ENST00000507635.5
CDS CCA 90 bp GGTCATCTCCTAAGTCCTCGATGGTGTCCAGGAGGCTGCCAGGGCTaGGTCGGAGGCGGCCGTCAGGCCTCTGCAGGGGCAGTGCGTCCT +
Preference number: 5 (lower is better)
Translates to: GHLLSPRWCPGGCQG*VGGGRQASAGAVRP
Trigger: AGGACGCACTGCCCCTGCAGAGGCCTGACGGCCGCCTCCGACCCAGCCCTGGCAGCCTCCTGGACACCATCGAGGACTTAGGAGATGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000504163.1
ENST00000506158.5
ENST00000507635.5
CDS CCA 90 bp CTGCTCCGGGAGGCCACGGCAGCCCTGCCAAGTCACTTTGGGCTCTaGGCCCCACAGGGAGGGCCAGTCTGTATGAGGCTGCAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: LLREATAALPSHFGL*APQGGPVCMRLQAL
Trigger: CAGAGCCTGCAGCCTCATACAGACTGGCCCTCCCTGTGGGGCCCAGAGCCCAAAGTGACTTGGCAGGGCTGCCGTGGCCTCCCGGAGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503379.5
CDS CCA 90 bp GGTCATCTCCTAAGTCCTCGATGGTGTCCAGGAGGCTGCCAGGGCTaGGTCGGAGGGCCGTCAGGCCTCTGCAGGGGCAGTGCGTCCTCG +
Preference number: 5 (lower is better)
Translates to: GHLLSPRWCPGGCQG*VGGPSGLCRGSASS
Trigger: CGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCCTCCGACCCAGCCCTGGCAGCCTCCTGGACACCATCGAGGACTTAGGAGATGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613650.1
CDS-3UTR CAA 90 bp CCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGAGCACCCCCTGGCCCTaGGCGGCAGCTGTGACTGCA +
Preference number: 5 (lower is better)
Translates to: PVPKVQWAPSSQGTGSPASTPWP*AAAVTA
Trigger: TGCAGTCACAGCTGCCGCCAAGGGCCAGGGGGTGCT...CGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378339.7
ENST00000613650.1
CDS TCA 90 bp GGGGCAGTGCGTCCTCGTCCCGGATCAGGGTCAGGTCCTGCATGCTaGAGCTGCGGAGCTTCTCTGACAGCACCCCCTTGGCGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: GAVRPRPGSGSGPAC*SCGASLTAPPWRQL
Trigger: CAGCTGCCGCCAAGGGGGTGCTGTCAGAGAAGCTCCGCAGCTTCAGCATGCAGGACCTGACCCTGATCCGGGACGAGGACGCACTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254901.9
ENST00000506158.5
CDS TCA 90 bp CCCTGGGAGTCTGAGCCTGCCCCCATCTCACCTTGGCGGCAGCTGTaGCTGCAGCATTGGCGGCAAGGTTCAGGCCCCTCTTGCCCACCC +
Preference number: 5 (lower is better)
Translates to: PWESEPAPISPWRQL*LQHWRQGSGPSCPP
Trigger: GGGTGGGCAAGAGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCCAAGGTGAGATGGGGGCAGGCTCAGACTCCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510467.5
CDS GCA 90 bp TCAGGGCAGGGTCATCTCCTAAGTCCTCGATGGTGTCCAGGAGGCTaGCAGGGCTGGGTCGGAGGGCCGTCAGGCCTCTGCAGGGGCAGT +
Preference number: 5 (lower is better)
Translates to: SGQGHLLSPRWCPGG*QGWVGGPSGLCRGS
Trigger: ACTGCCCCTGCAGAGGCCTGACGGCCCTCCGACCCAGCCCTGGCAGCCTCCTGGACACCATCGAGGACTTAGGAGATGACCCTGCCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613650.1
CDS-3UTR CAA 90 bp GGTCGGAGGCGGCCGTCAGGCCTCTGCAGGGGCAGTGCGTCCTCGTCCCGGATCATCTCCTTCTCCTTGTaGGACAGCGTTGGGTGCACG +
Preference number: 5 (lower is better)
Translates to: GRRRPSGLCRGSASSSRIISFSL*DSVGCT
Trigger: CGTGCACCCAACGCTGTCCAACAAGGAGAAGGAGAT...GATCCGGGACGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCGCCTCCGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR CAA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGGCTGTGACTGCAGCATaGGCGGCAAGGTTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGAVTAA*AARFRP
Trigger: GGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGC...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CAA 90 bp GGGCCCAGGGGCCTGAGACACCTAGGCTACTGGCACAGTGTGGAGCAGGGGCTGTCTGACAGCACCCCCTaGGCGGCAGCTGTGACTGCA +
Preference number: 5 (lower is better)
Translates to: GPRGLRHLGYWHSVEQGLSDSTP*AAAVTA
Trigger: TGCAGTCACAGCTGCCGCCAAGGGGGTGCTGTCAGA...CAGCCCCTGCTCCACACTGTGCCAGTAGCCTAGGTGTCTCAGGCCCCTGGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254901.9
CDS-3UTR CAA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGTCTGACAGCACCCCCTaGGCGGCAGCTGTGACTGCA +
Preference number: 5 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGSDSTP*AAAVTA
Trigger: TGCAGTCACAGCTGCCGCCAAGGGGGTGCTGTCAGA...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254901.9
ENST00000506158.5
CDS-3UTR CAA 90 bp GGGTGGGCCCTGAGGAGCACGGGAGTCCAGCCCAGGGGCACGGTGGCAATGGGGGGGAATCTGCCGGGTTaGTGCTGGACCTTAGACTCA +
Preference number: 5 (lower is better)
Translates to: GWALRSTGVQPRGTVAMGGNLPG*CWTLDS
Trigger: TGAGTCTAAGGTCCAGCACAAACCCGGCAGATTCCC...CCCCATTGCCACCGTGCCCCTGGGCTGGACTCCCGTGCTCCTCAGGGCCCACCC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp GGGTGGGCCCTGAGGAGCACGGGAGTCCAGCCCAGGGGCACGGTGGCAATGGGGCCTCTGAGAAGCGGATaGCTATGGGCTTCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: GWALRSTGVQPRGTVAMGPLRSG*LWASAR
Trigger: CCTTGCTGAAGCCCATAGCAATCCGCTTCTCAGAGG...CCCCATTGCCACCGTGCCCCTGGGCTGGACTCCCGTGCTCCTCAGGGCCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp TTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGAGCAGAAGCACCCCCTGGCCCTaGGCGGCAGCTGTGACTGCA +
Preference number: 5 (lower is better)
Translates to: FLLALTEAVAEAGAGVSRSTPWP*AAAVTA
Trigger: TGCAGTCACAGCTGCCGCCAAGGGCCAGGGGGTGCT...TCTGCTCACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378339.7
ENST00000613650.1
CDS GCA 90 bp CTCTGCAGGGGCAGTGCGTCCTCGTCCCGGATCAGGGTCAGGTCCTaGATGCTGAAGCTGCGGAGCTTCTCTGACAGCACCCCCTTGGCG +
Preference number: 5 (lower is better)
Translates to: LCRGSASSSRIRVRS*MLKLRSFSDSTPLA
Trigger: CGCCAAGGGGGTGCTGTCAGAGAAGCTCCGCAGCTTCAGCATGCAGGACCTGACCCTGATCCGGGACGAGGACGCACTGCCCCTGCAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254901.9
ENST00000506158.5
CDS-3UTR CAA 90 bp GGGCCCAGGGGCCTGAGACACCTAGGCTACTGGCACAGTGTGGAGCAGGGGCTGAGGTTCAGGCCCCTCTaGCCCACCCTCATCATGGTC +
Preference number: 5 (lower is better)
Translates to: GPRGLRHLGYWHSVEQGLRFRPL*PTLIMV
Trigger: GACCATGATGAGGGTGGGCAAGAGGGGCCTGAACCT...CAGCCCCTGCTCCACACTGTGCCAGTAGCCTAGGTGTCTCAGGCCCCTGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGAGGTTCAGGCCCCTCTaGCCCACCCTCATCATGGTC +
Preference number: 5 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGRFRPL*PTLIMV
Trigger: GACCATGATGAGGGTGGGCAAGAGGGGCCTGAACCT...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CAA 90 bp CTGGCCCTTGGCGGCAGCTGTGACTGCAGCATTGGCGGCAAGGTTCAGGCCCCTGCTGTGACTGCAGCATaGGCGGCAAGGTTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: LALGGSCDCSIGGKVQAPAVTAA*AARFRP
Trigger: GGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGC...AGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCCAAGGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR CAA 90 bp GTCTTCCATCCACAGCTGCACCTGGAGGCCCCACCCAGGGTCCCCAACGTCCTCGCTGTGACTGCAGCATaGGCGGCAAGGTTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: VFHPQLHLEAPPRVPNVLAVTAA*AARFRP
Trigger: GGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGC...GAGGACGTTGGGGACCCTGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS GCA 90 bp GGGAGTCTGAGCCTGCCCCCATCTCACCTTGGCGGCAGCTGTGACTaGAGCATTGGCGGCAAGGTTCAGGCCCCTCTTGCCCACCCTCAT +
Preference number: 5 (lower is better)
Translates to: GSLSLPPSHLGGSCD*SIGGKVQAPLAHPH
Trigger: ATGAGGGTGGGCAAGAGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCCAAGGTGAGATGGGGGCAGGCTCAGACTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510467.5
CDS-3UTR CAA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGCCTTGTTGGACAGCGTaGGGTGCACGAACTTGCGGT +
Preference number: 5 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGPCWTA*GARTCG
Trigger: ACCGCAAGTTCGTGCACCCAACGCTGTCCAACAAGG...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CAA 90 bp CACGTGTTCCTCCTGGCCCTGACTGAAGCCGTGGCAGAAGCTGGGGCGGGTGTGAGGTTCAGGCCCCTCTaGCCCACCCTCATCATGGTC +
Preference number: 5 (lower is better)
Translates to: HVFLLALTEAVAEAGAGVRFRPL*PTLIMV
Trigger: GACCATGATGAGGGTGGGCAAGAGGGGCCTGAACCT...CACACCCGCCCCAGCTTCTGCCACGGCTTCAGTCAGGGCCAGGAGGAACACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp GGGCAGGCACCGGAAATGGCCATCTGCGGGGCCCAGGGGCCTGAGACACCTAGGATGGGTTTGGCCCTCTaGGGAGCTTTGTCTCCCATG +
Preference number: 5 (lower is better)
Translates to: GQAPEMAICGAQGPETPRMGLAL*GALSPM
Trigger: CATGGGAGACAAAGCTCCCAAGAGGGCCAAACCCAT...CCTAGGTGTCTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGGTGCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGCGGGTCTTCAGTGTCTaGGAAGCCAGTGGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGRVFSV*EASGSA
Trigger: AGCTGAGCCACTGGCTTCCAAGACACTGAAGACCCG...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CAA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGCCAGAGGTCTTCTTCTaGGGCCGGGTCTTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGPEVFF*GRVFSV
Trigger: GACACTGAAGACCCGGCCCAAGAAGAAGACCTCTGG...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CAA 90 bp GGGCAGGCACCGGAAATGGCCATCTGCGGGGCCCAGGGGCCTGAGACACCTAGGCCTCTGAGAAGCGGATaGCTATGGGCTTCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: GQAPEMAICGAQGPETPRPLRSG*LWASAR
Trigger: CCTTGCTGAAGCCCATAGCAATCCGCTTCTCAGAGG...CCTAGGTGTCTCAGGCCCCTGGGCCCCGCAGATGGCCATTTCCGGTGCCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp CCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGCTGGAGGGACAGTCCTaGACCCAAACTACCCCGAGC +
Preference number: 5 (lower is better)
Translates to: PVPKVQWAPSSQGTGSPALEGQS*TQTTPS
Trigger: GCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCAG...CGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp GTCTTCCATCCACAGCTGCACCTGGAGGCCCCACCCAGGGTCCCCAACGTCCTCCTGGAGGGACAGTCCTaGACCCAAACTACCCCGAGC +
Preference number: 5 (lower is better)
Translates to: VFHPQLHLEAPPRVPNVLLEGQS*TQTTPS
Trigger: GCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCAG...GAGGACGTTGGGGACCCTGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp CCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGCCTTGTTGGACAGCGTaGGGTGCACGAACTTGCGGT +
Preference number: 5 (lower is better)
Translates to: PVPKVQWAPSSQGTGSPAPCWTA*GARTCG
Trigger: ACCGCAAGTTCGTGCACCCAACGCTGTCCAACAAGG...CGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp GTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTTGTTGGACAGCGTaGGGTGCACGAACTTGCGGT +
Preference number: 5 (lower is better)
Translates to: VPKVQWAPSSQGTGSPAAPCWTA*GARTCG
Trigger: ACCGCAAGTTCGTGCACCCAACGCTGTCCAACAAGG...AGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGATCTCCTTCTCCTTGTaGGACAGCGTTGGGTGCACG +
Preference number: 5 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGISFSL*DSVGCT
Trigger: CGTGCACCCAACGCTGTCCAACAAGGAGAAGGAGAT...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CAA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGTCGATCTCCTTCTCCTaGTTGGACAGCGTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGSISFS*LDSVGC
Trigger: GCACCCAACGCTGTCCAACAAGGAGAAGGAGATCGA...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CAA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGGGGAATCTGCCGGGTTaGTGCTGGACCTTAGACTCA +
Preference number: 5 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGGNLPG*CWTLDS
Trigger: TGAGTCTAAGGTCCAGCACAAACCCGGCAGATTCCC...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CAA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGGCCCTCTTGGGAGCTTaGTCTCCCATGTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGALLGA*SPMSSS
Trigger: TGAGGATGACATGGGAGACAAAGCTCCCAAGAGGGC...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CAA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGATGGGTTTGGCCCTCTaGGGAGCTTTGTCTCCCATG +
Preference number: 5 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGMGLAL*GALSPM
Trigger: CATGGGAGACAAAGCTCCCAAGAGGGCCAAACCCAT...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CAA 90 bp GTCTTCCATCCACAGCTGCACCTGGAGGCCCCACCCAGGGTCCCCAACGTCCTCCGGGTCTTCAGTGTCTaGGAAGCCAGTGGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: VFHPQLHLEAPPRVPNVLRVFSV*EASGSA
Trigger: AGCTGAGCCACTGGCTTCCAAGACACTGAAGACCCG...GAGGACGTTGGGGACCCTGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp CCAAAGGTCCAATGGGCACCCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTCCAGAGGTCTTCTTCTaGGGCCGGGTCTTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: PKVQWAPSSQGTGSPAAPPEVFF*GRVFSV
Trigger: GACACTGAAGACCCGGCCCAAGAAGAAGACCTCTGG...AGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGGGTGCCCATTGGACCTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp GTCTTCCATCCACAGCTGCACCTGGAGGCCCCACCCAGGGTCCCCAACGTCCTCGGGAATCTGCCGGGTTaGTGCTGGACCTTAGACTCA +
Preference number: 5 (lower is better)
Translates to: VFHPQLHLEAPPRVPNVLGNLPG*CWTLDS
Trigger: TGAGTCTAAGGTCCAGCACAAACCCGGCAGATTCCC...GAGGACGTTGGGGACCCTGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp GTCTTCCATCCACAGCTGCACCTGGAGGCCCCACCCAGGGTCCCCAACGTCCTCATGGGTTTGGCCCTCTaGGGAGCTTTGTCTCCCATG +
Preference number: 5 (lower is better)
Translates to: VFHPQLHLEAPPRVPNVLMGLAL*GALSPM
Trigger: CATGGGAGACAAAGCTCCCAAGAGGGCCAAACCCAT...GAGGACGTTGGGGACCCTGGGTGGGGCCTCCAGGTGCAGCTGTGGATGGAAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp GGGCTGGGTCTGAGGCCCCTCCTGAGGCTTCATCCTTGCTCTGCAGCCTGCGGGGCTTTGGGCGCTTTTTaGATGGGTTTGGCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: GLGLRPLLRLHPCSAACGALGAF*MGLALL
Trigger: CAAGAGGGCCAAACCCATCAAAAAAGCGCCCAAAGC...CCCGCAGGCTGCAGAGCAAGGATGAAGCCTCAGGAGGGGCCTCAGACCCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000506158.5
ENST00000613650.1
CDS-3UTR CAA 90 bp TCCCCGTGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTCTGGAGGGACAGTCCTaGACCCAAACTACCCCGAGC +
Preference number: 5 (lower is better)
Translates to: SPCAPFPPCAFRPVLGPSLEGQS*TQTTPS
Trigger: GCTCGGGGTAGTTTGGGTCAAGGACTGTCCCTCCAG...AGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACACGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS GCA 90 bp GTGACTCGGCCAGATAGCAGTAGAGCCTGGACTGGAGCCTCCAGCTaGATGAGCCCAGAGTCTCTACAGCCCCGAGTACAGGGTGGATGC +
Preference number: 5 (lower is better)
Translates to: VTRPDSSRAWTGASS*MSPESLQPRVQGGC
Trigger: GCATCCACCCTGTACTCGGGGCTGTAGAGACTCTGGGCTCATGCAGCTGGAGGCTCCAGTCCAGGCTCTACTGCTATCTGGCCGAGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510467.5
CDS-3UTR CAA 90 bp CTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCATCGATCTCCTTCTCCTaGTTGGACAGCGTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: LQARPWSIWARTSPSLLPSISFS*LDSVGC
Trigger: GCACCCAACGCTGTCCAACAAGGAGAAGGAGATCGA...TGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp CCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCTCGATCTCCTTCTCCTaGTTGGACAGCGTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: PMCLQARPWSIWARTSPSSISFS*LDSVGC
Trigger: GCACCCAACGCTGTCCAACAAGGAGAAGGAGATCGA...GGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS TCA 90 bp CTCGGCCAGATAGCAGTAGAGCCTGGACTGGAGCCTCCAGCTGCATaGGCCCAGAGTCTCTACAGCCCCGAGTACAGGGTGGATGCAAAG +
Preference number: 5 (lower is better)
Translates to: LGQIAVEPGLEPPAA*AQSLYSPEYRVDAK
Trigger: CTTTGCATCCACCCTGTACTCGGGGCTGTAGAGACTCTGGGCTCATGCAGCTGGAGGCTCCAGTCCAGGCTCTACTGCTATCTGGCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510467.5
CDS-3UTR CAA 90 bp GTCGCCCCCGCCAGAGGTCTTCTTCTTGGGCCGGGTCTTCAGTGTCTTGGAAGCATCTCCTTCTCCTTGTaGGACAGCGTTGGGTGCACG +
Preference number: 5 (lower is better)
Translates to: VAPARGLLLGPGLQCLGSISFSL*DSVGCT
Trigger: CGTGCACCCAACGCTGTCCAACAAGGAGAAGGAGAT...GCTTCCAAGACACTGAAGACCCGGCCCAAGAAGAAGACCTCTGGCGGGGGCGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613650.1
CDS-3UTR CAA 90 bp TCCCCGTGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTTCGATCTCCTTCTCCTaGTTGGACAGCGTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: SPCAPFPPCAFRPVLGPSSISFS*LDSVGC
Trigger: GCACCCAACGCTGTCCAACAAGGAGAAGGAGATCGA...AGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACACGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp CCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTGCATTTCTCTTTCTCCTTCCGGGTCTTCAGTGTCTaGGAAGCCAGTGGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: PLPKEPGAPRLLHFSFSFRVFSV*EASGSA
Trigger: AGCTGAGCCACTGGCTTCCAAGACACTGAAGACCCG...GAAGGAGAAAGAGAAATGCAGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp TGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTACCAGAGGTCTTCTTCTaGGGCCGGGTCTTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: CAPFPPCAFRPVLGPSGLPEVFF*GRVFSV
Trigger: GACACTGAAGACCCGGCCCAAGAAGAAGACCTCTGG...TAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp CCTCATCATGGTCTCATAGCTCTTGTCTCGGGCCTGCGTGATGTACTCGTCGATAGCACCCCCTGGCCCTaGGCGGCAGCTGTGACTGCA +
Preference number: 5 (lower is better)
Translates to: PHHGLIALVSGLRDVLVDSTPWP*AAAVTA
Trigger: TGCAGTCACAGCTGCCGCCAAGGGCCAGGGGGTGCT...ATCGACGAGTACATCACGCAGGCCCGAGACAAGAGCTATGAGACCATGATGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR CAA 90 bp GCCAGAGGTCTTCTTCTTGGGCCGGGTCTTCAGTGTCTTGGAAGCCAGTGGCTCCCTTGTTGGACAGCGTaGGGTGCACGAACTTGCGGT +
Preference number: 5 (lower is better)
Translates to: ARGLLLGPGLQCLGSQWLPCWTA*GARTCG
Trigger: ACCGCAAGTTCGTGCACCCAACGCTGTCCAACAAGG...GAGCCACTGGCTTCCAAGACACTGAAGACCCGGCCCAAGAAGAAGACCTCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613650.1
CDS-3UTR CAA 90 bp TGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTAATCTCCTTCTCCTTGTaGGACAGCGTTGGGTGCACG +
Preference number: 5 (lower is better)
Translates to: CAPFPPCAFRPVLGPSGLISFSL*DSVGCT
Trigger: CGTGCACCCAACGCTGTCCAACAAGGAGAAGGAGAT...TAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp CTCCCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCTGAGAAGCGGATTGCTGTGACTGCAGCATaGGCGGCAAGGTTCAGGCCC +
Preference number: 5 (lower is better)
Translates to: LPNQGEQWKHDRTSEKRIAVTAA*AARFRP
Trigger: GGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGC...AATCCGCTTCTCAGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp TGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGCCCTCTTGGGAGCTTaGTCTCCCATGTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: CAPFPPCAFRPVLGPSGLALLGA*SPMSSS
Trigger: TGAGGATGACATGGGAGACAAAGCTCCCAAGAGGGC...TAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp GCCCGTCCTTGGTCCATCTGGGCTAGGACTTCCCCCTCCCTGCTCCCAAACCAAGCTTTGGGCGCTTTTTaGATGGGTTTGGCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: ARPWSIWARTSPSLLPNQALGAF*MGLALL
Trigger: CAAGAGGGCCAAACCCATCAAAAAAGCGCCCAAAGC...TTGGTTTGGGAGCAGGGAGGGGGAAGTCCTAGCCCAGATGGACCAAGGACGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS CCA 90 bp AATGGCCGGACAATCAAAGTGACTCGGCCAGATAGCAGTAGAGCCTaGACTGGAGCCTCCAGCTGCATGAGCCCAGAGTCTCTACAGCCC +
Preference number: 5 (lower is better)
Translates to: NGRTIKVTRPDSSRA*TGASSCMSPESLQP
Trigger: GGGCTGTAGAGACTCTGGGCTCATGCAGCTGGAGGCTCCAGTCCAGGCTCTACTGCTATCTGGCCGAGTCACTTTGATTGTCCGGCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510467.5
CDS-3UTR CAA 90 bp TGTGACTGCAGCATTGGCGGCAAGGTTCAGGCCCCTCTTGCCCACCCTCATCATTCGATCTCCTTCTCCTaGTTGGACAGCGTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: CDCSIGGKVQAPLAHPHHSISFS*LDSVGC
Trigger: GCACCCAACGCTGTCCAACAAGGAGAAGGAGATCGA...ATGATGAGGGTGGGCAAGAGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR CAA 90 bp CCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCTGAGAAGCGGATTGCTAGGTTCAGGCCCCTCTaGCCCACCCTCATCATGGTC +
Preference number: 5 (lower is better)
Translates to: PNQGEQWKHDRTSEKRIARFRPL*PTLIMV
Trigger: GACCATGATGAGGGTGGGCAAGAGGGGCCTGAACCT...AGCAATCCGCTTCTCAGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp ACTCGTCGATCTCCTTCTCCTTGTTGGACAGCGTTGGGTGCACGAACTTGCGGTAGGTTCAGGCCCCTCTaGCCCACCCTCATCATGGTC +
Preference number: 5 (lower is better)
Translates to: TRRSPSPCWTALGARTCGRFRPL*PTLIMV
Trigger: GACCATGATGAGGGTGGGCAAGAGGGGCCTGAACCT...ACCGCAAGTTCGTGCACCCAACGCTGTCCAACAAGGAGAAGGAGATCGACGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507511.5
CDS-3UTR CAA 90 bp TGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTGGGCTAGCTTTGGGCGCTTTTTaGATGGGTTTGGCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: CAPFPPCAFRPVLGPSGLALGAF*MGLALL
Trigger: CAAGAGGGCCAAACCCATCAAAAAAGCGCCCAAAGC...TAGCCCAGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp ACAGGACCTCTGAGAAGCGGATTGCTATGGGCTTCAGCAAGGCACTGGGTGGGTCCAGAGGTCTTCTTCTaGGGCCGGGTCTTCAGTGTC +
Preference number: 5 (lower is better)
Translates to: TGPLRSGLLWASARHWVGPEVFF*GRVFSV
Trigger: GACACTGAAGACCCGGCCCAAGAAGAAGACCTCTGG...ACCCACCCAGTGCCTTGCTGAAGCCCATAGCAATCCGCTTCTCAGAGGTCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp GCACGGTGGCAATGGGGTGACCTAAAAGGGAGCAAGGTCATAGGAGCAGGTGAGGCCCTCTTGGGAGCTTaGTCTCCCATGTCATCCTCA +
Preference number: 5 (lower is better)
Translates to: ARWQWGDLKGSKVIGAGEALLGA*SPMSSS
Trigger: TGAGGATGACATGGGAGACAAAGCTCCCAAGAGGGC...CTCACCTGCTCCTATGACCTTGCTCCCTTTTAGGTCACCCCATTGCCACCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp GTCGCCCCCGCCAGAGGTCTTCTTCTTGGGCCGGGTCTTCAGTGTCTTGGAAGCCCAGAGTTTGGTTTATaGGCTCATCCAGTGCCAAAG +
Preference number: 5 (lower is better)
Translates to: VAPARGLLLGPGLQCLGSPEFGL*AHPVPK
Trigger: CTTTGGCACTGGATGAGCCAATAAACCAAACTCTGG...GCTTCCAAGACACTGAAGACCCGGCCCAAGAAGAAGACCTCTGGCGGGGGCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613650.1
CDS-3UTR CAA 90 bp TCCCCGTGTGCTCCCTTTCCCCCATGTGCCTTCAGGCCCGTCCTTGGTCCATCTATGAGGTGCCAGAGTTaGGTTTATTGGCTCATCCAG +
Preference number: 5 (lower is better)
Translates to: SPCAPFPPCAFRPVLGPSMRCQS*VYWLIQ
Trigger: CTGGATGAGCCAATAAACCAAACTCTGGCACCTCAT...AGATGGACCAAGGACGGGCCTGAAGGCACATGGGGGAAAGGGAGCACACGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254901.9
CDS-3UTR CAA 90 bp CTCCCAAACCAAGGCGAGCAGTGGAAACACGACAGGACCTCTGAGAAGCGGATTATCTCCTTCTCCTTGTaGGACAGCGTTGGGTGCACG +
Preference number: 5 (lower is better)
Translates to: LPNQGEQWKHDRTSEKRIISFSL*DSVGCT
Trigger: CGTGCACCCAACGCTGTCCAACAAGGAGAAGGAGAT...AATCCGCTTCTCAGAGGTCCTGTCGTGTTTCCACTGCTCGCCTTGGTTTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp GCACGGTGGCAATGGGGTGACCTAAAAGGGAGCAAGGTCATAGGAGCAGGTGAGGCTTTGGGCGCTTTTTaGATGGGTTTGGCCCTCTTG +
Preference number: 5 (lower is better)
Translates to: ARWQWGDLKGSKVIGAGEALGAF*MGLALL
Trigger: CAAGAGGGCCAAACCCATCAAAAAAGCGCCCAAAGC...CTCACCTGCTCCTATGACCTTGCTCCCTTTTAGGTCACCCCATTGCCACCGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp CCTCTTCCCAAGGAACCGGGAGCCCCGCGGCTCCTGCATTTCTCTTTCTCCTTCCCAGAGTTTGGTTTATaGGCTCATCCAGTGCCAAAG +
Preference number: 5 (lower is better)
Translates to: PLPKEPGAPRLLHFSFSFPEFGL*AHPVPK
Trigger: CTTTGGCACTGGATGAGCCAATAAACCAAACTCTGG...GAAGGAGAAAGAGAAATGCAGGAGCCGCGGGGCTCCCGGTTCCTTGGGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS CCA 90 bp ATATCACGAAGGCGATCTTCAGTTCAAAGTAGAAGGGGAACCTGTTaGGACAGGGGCAAGCGCAGAGTACAGGGCAGGGAGTTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: ISRRRSSVQSRRGTC*DRGKRRVQGRELGG
Trigger: ACCTCCCAACTCCCTGCCCTGTACTCTGCGCTTGCCCCTGTCCCAACAGGTTCCCCTTCTACTTTGAACTGAAGATCGCCTTCGTGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507635.5
CDS-3UTR CAA 90 bp GCCAGAGTTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCGGGAATCTGCCGGGTTaGTGCTGGACCTTAGACTCA +
Preference number: 5 (lower is better)
Translates to: ARVWFIGSSSAKGPMGTLGNLPG*CWTLDS
Trigger: TGAGTCTAAGGTCCAGCACAAACCCGGCAGATTCCC...GAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp GCCAGAGTTTGGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCATGGGTTTGGCCCTCTaGGGAGCTTTGTCTCCCATG +
Preference number: 5 (lower is better)
Translates to: ARVWFIGSSSAKGPMGTLMGLAL*GALSPM
Trigger: CATGGGAGACAAAGCTCCCAAGAGGGCCAAACCCAT...GAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACCAAACTCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS-3UTR CAA 90 bp GGTTTATTGGCTCATCCAGTGCCAAAGGTCCAATGGGCACCCTCTTCCCAAGGACCTCTGAGAAGCGGATaGCTATGGGCTTCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: GLLAHPVPKVQWAPSSQGPLRSG*LWASAR
Trigger: CCTTGCTGAAGCCCATAGCAATCCGCTTCTCAGAGG...TCCTTGGGAAGAGGGTGCCCATTGGACCTTTGGCACTGGATGAGCCAATAAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000613650.1
CDS GCA 72 bp GGCTGCCAGGGCTGGGTCGGAGGGCCGTCAGGCCTCTaGAGGGGCAGTGCGTCCTCGTCCCGGATCAGGGTC +
Preference number: 6 (lower is better)
Translates to: GCQGWVGGPSGL*RGSASSSRIRV
Trigger: GACCCTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCCTCCGACCCAGCCCTGGCAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613650.1
CDS GCA 72 bp CTGGGTCGGAGGGCCGTCAGGCCTCTGCAGGGGCAGTaGGTCCTCGTCCCGGATCAGGGTCAGGTCCTGCAT +
Preference number: 6 (lower is better)
Translates to: LGRRAVRPLQGQ*VLVPDQGQVLH
Trigger: ATGCAGGACCTGACCCTGATCCGGGACGAGGACGCACTGCCCCTGCAGAGGCCTGACGGCCCTCCGACCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613650.1
CDS CCA 72 bp GGGACAGGGGCAAGCGCAGAGTACAGGGCAGGGAGTTaGGAGGTGCCCTGTGTCCAGCAGCACCGGCCCCAT +
Preference number: 6 (lower is better)
Translates to: GTGASAEYRAGS*EVPCVQQHRPH
Trigger: ATGGGGCCGGTGCTGCTGGACACAGGGCACCTCCCAACTCCCTGCCCTGTACTCTGCGCTTGCCCCTGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507635.5
CDS CCA 72 bp GCTCCGGGAGGCCACGGCAGCCCTGCCAAGTCACTTTaGGCTCTGGGCCCCACAGGGAGGGCCAGTCTGTAT +
Preference number: 6 (lower is better)
Translates to: APGGHGSPAKSL*ALGPTGRASLY
Trigger: ATACAGACTGGCCCTCCCTGTGGGGCCCAGAGCCCAAAGTGACTTGGCAGGGCTGCCGTGGCCTCCCGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503379.5
CDS CCA 72 bp CTAAGTCCTCGATGGTGTCCAGGAGGCTGCCAGGGCTaGGTCGGAGGGCCGTCAGGCCTCTGCAGGGGCAGT +
Preference number: 6 (lower is better)
Translates to: LSPRWCPGGCQG*VGGPSGLCRGS
Trigger: ACTGCCCCTGCAGAGGCCTGACGGCCCTCCGACCCAGCCCTGGCAGCCTCCTGGACACCATCGAGGACTTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613650.1
CDS GCA 72 bp GGGCAAGCGCAGAGTACAGGGCAGGGAGTTGGGAGGTaGCCTGTGTCCAGCAGCACCGGCCCCATGTGTGAC +
Preference number: 6 (lower is better)
Translates to: GQAQSTGQGVGR*PVSSSTGPMCD
Trigger: GTCACACATGGGGCCGGTGCTGCTGGACACAGGGCACCTCCCAACTCCCTGCCCTGTACTCTGCGCTTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507635.5
CDS GCA 72 bp GGTCATCTCCTAAGTCCTCGATGGTGTCCAGGAGGCTaGCAGGGCTGGGTCGGAGGGCCGTCAGGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: GHLLSPRWCPGG*QGWVGGPSGLC
Trigger: GCAGAGGCCTGACGGCCCTCCGACCCAGCCCTGGCAGCCTCCTGGACACCATCGAGGACTTAGGAGATGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613650.1
CDS CCA 72 bp GAGGCCACGGCAGCCCTGCCAAGTCACTTTGGGCTCTaGGCCCCACAGGGAGGGCCAGTCTGTATGAGGCTG +
Preference number: 6 (lower is better)
Translates to: EATAALPSHFGL*APQGGPVCMRL
Trigger: CAGCCTCATACAGACTGGCCCTCCCTGTGGGGCCCAGAGCCCAAAGTGACTTGGCAGGGCTGCCGTGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503379.5
CDS GCA 72 bp AGCCTGCCCCCATCTCACCTTGGCGGCAGCTGTGACTaGAGCATTGGCGGCAAGGTTCAGGCCCCTCTTGCC +
Preference number: 6 (lower is better)
Translates to: SLPPSHLGGSCD*SIGGKVQAPLA
Trigger: GGCAAGAGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCCAAGGTGAGATGGGGGCAGGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510467.5
CDS CAA 72 bp CCCCATCTCACCTTGGCGGCAGCTGTGACTGCAGCATaGGCGGCAAGGTTCAGGCCCCTCTTGCCCACCCTC +
Preference number: 6 (lower is better)
Translates to: PHLTLAAAVTAA*AARFRPLLPTL
Trigger: GAGGGTGGGCAAGAGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCCAAGGTGAGATGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510467.5
CDS TCA 72 bp TCTGAGCCTGCCCCCATCTCACCTTGGCGGCAGCTGTaGCTGCAGCATTGGCGGCAAGGTTCAGGCCCCTCT +
Preference number: 6 (lower is better)
Translates to: SEPAPISPWRQL*LQHWRQGSGPS
Trigger: AGAGGGGCCTGAACCTTGCCGCCAATGCTGCAGTCACAGCTGCCGCCAAGGTGAGATGGGGGCAGGCTCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510467.5
CDS CCA 72 bp GTCCTCACCCAGTCCCACACAGACAGAGCTGAGGGCTaGGGCAGGGCCACACTTTGCCTCTGGGGACAGATG +
Preference number: 6 (lower is better)
Translates to: VLTQSHTDRAEG*GRATLCLWGQM
Trigger: CATCTGTCCCCAGAGGCAAAGTGTGGCCCTGCCCCAGCCCTCAGCTCTGTCTGTGTGGGACTGGGTGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504163.1
CDS CCA 72 bp CATGAGCCCAGAGTCTCTACAGCCCCGAGTACAGGGTaGATGCAAAGGGGCCTGGCCAGGGCCCTTTGTACA +
Preference number: 6 (lower is better)
Translates to: HEPRVSTAPSTG*MQRGLARALCT
Trigger: TGTACAAAGGGCCCTGGCCAGGCCCCTTTGCATCCACCCTGTACTCGGGGCTGTAGAGACTCTGGGCTCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510467.5
CDS GCA 72 bp CCAGATAGCAGTAGAGCCTGGACTGGAGCCTCCAGCTaGATGAGCCCAGAGTCTCTACAGCCCCGAGTACAG +
Preference number: 6 (lower is better)
Translates to: PDSSRAWTGASS*MSPESLQPRVQ
Trigger: CTGTACTCGGGGCTGTAGAGACTCTGGGCTCATGCAGCTGGAGGCTCCAGTCCAGGCTCTACTGCTATCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510467.5
CDS GCA 72 bp CCTCAGAAGCCTCTGTCCGGGAATCTGCCGGGTTTGTaGTGGACCTTAGACTCAGGGCAGGGTCATCTCCTA +
Preference number: 6 (lower is better)
Translates to: PQKPLSGNLPGL*WTLDSGQGHLL
Trigger: TAGGAGATGACCCTGCCCTGAGTCTAAGGTCCAGCACAAACCCGGCAGATTCCCGGACAGAGGCTTCTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000504163.1
ENST00000506158.5
ENST00000507635.5
ENST00000613650.1
CDS CAA 72 bp CATCCTCAGAAGCCTCTGTCCGGGAATCTGCCGGGTTaGTGCTGGACCTTAGACTCAGGGCAGGGTCATCTC +
Preference number: 6 (lower is better)
Translates to: HPQKPLSGNLPG*CWTLDSGQGHL
Trigger: GAGATGACCCTGCCCTGAGTCTAAGGTCCAGCACAAACCCGGCAGATTCCCGGACAGAGGCTTCTGAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254901.9
ENST00000378339.7
ENST00000504163.1
ENST00000506158.5
ENST00000507635.5
ENST00000613650.1
CDS TCA 72 bp CTGGGGACAGATGGGGAAATGGCCGGACAATCAAAGTaGCTCGGCCAGATAGCAGTAGAGCCTGGACTGGAG +
Preference number: 6 (lower is better)
Translates to: LGTDGEMAGQSK*LGQIAVEPGLE
Trigger: CTCCAGTCCAGGCTCTACTGCTATCTGGCCGAGTCACTTTGATTGTCCGGCCATTTCCCCATCTGTCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510467.5
CDS CCA 72 bp AGGCGATCTTCAGTTCAAAGTAGAAGGGGAACCTGTTaGGACAGGGGCAAGCGCAGAGTACAGGGCAGGGAG +
Preference number: 6 (lower is better)
Translates to: RRSSVQSRRGTC*DRGKRRVQGRE
Trigger: CTCCCTGCCCTGTACTCTGCGCTTGCCCCTGTCCCAACAGGTTCCCCTTCTACTTTGAACTGAAGATCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507635.5
CDS CCA 72 bp ACAATCAAAGTGACTCGGCCAGATAGCAGTAGAGCCTaGACTGGAGCCTCCAGCTGCATGAGCCCAGAGTCT +
Preference number: 6 (lower is better)
Translates to: TIKVTRPDSSRA*TGASSCMSPES
Trigger: AGACTCTGGGCTCATGCAGCTGGAGGCTCCAGTCCAGGCTCTACTGCTATCTGGCCGAGTCACTTTGATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510467.5