RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for REELD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000250673

Ensembl transcript IDs: ENST00000636502.1, ENST00000636686.1

Found 241 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGGCCTGGGCTCCCTCTAGCCCAATGTCAGGCCGTGGGTTGGTCTaGCGAGGGTATCCCACTCCACCCTCTCCATTTCCCTTCCCTGCT +
Preference number: 1 (lower is better)
Translates to: GAWAPSSPMSGRGLV*RGYPTPPSPFPFPA
Trigger: AGCAGGGAAGGGAAATGGAGAGGGTGGAGTGGGATACCCTCGGCAGACCAACCCACGGCCTGACATTGGGCTAGAGGGAGCCCAGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CCA 90 bp CTCTCTGAGGAGACTCTCTTGAGGGCCACGAGCCTCTCCAGCCTGTaGACCTCCAGGGACGGCTCTAGGGTGGGATTGCTGTCCCCGCTG +
Preference number: 1 (lower is better)
Translates to: LSEETLLRATSLSSL*TSRDGSRVGLLSPL
Trigger: CAGCGGGGACAGCAATCCCACCCTAGAGCCGTCCCTGGAGGTCCACAGGCTGGAGAGGCTCGTGGCCCTCAAGAGAGTCTCCTCAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR TCA 90 bp AGGGCCATGCCCAGGGTGGCTGACAGGCAAAGCAGAATTCCCAGCTaGGGAGTTCTGAGCTGGATACCCAGAGGGGCCTGGGCTCCCTCT +
Preference number: 1 (lower is better)
Translates to: RAMPRVADRQSRIPS*GVLSWIPRGAWAPS
Trigger: AGAGGGAGCCCAGGCCCCTCTGGGTATCCAGCTCAGAACTCCTCAGCTGGGAATTCTGCTTTGCCTGTCAGCCACCCTGGGCATGGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CCA 90 bp TGGCACCATGGGAAAAGGCAGATGAGCAGGAAGCCAGGCAGAGGGTaGTACAAGCCCAGCCCACGAGGGCAGCCTGCATCCTCATCCTGC +
Preference number: 1 (lower is better)
Translates to: WHHGKRQMSRKPGRG*YKPSPRGQPASSSC
Trigger: GCAGGATGAGGATGCAGGCTGCCCTCGTGGGCTGGGCTTGTACCACCCTCTGCCTGGCTTCCTGCTCATCTGCCTTTTCCCATGGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CCA 90 bp GGGCTTGGATGTGCTTGGGCTGCATGTCATCACAGGCCACCGTGCTaGCACCATGGGAAAAGGCAGATGAGCAGGAAGCCAGGCAGAGGG +
Preference number: 1 (lower is better)
Translates to: GLGCAWAACHHRPPC*HHGKRQMSRKPGRG
Trigger: CCCTCTGCCTGGCTTCCTGCTCATCTGCCTTTTCCCATGGTGCCAGCACGGTGGCCTGTGATGACATGCAGCCCAAGCACATCCAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR TCA 90 bp GGGACGGCTCTAGGGTGGGATTGCTGTCCCCGCTGGGTTGCTGGTTaGTGCTGCCTTCAGTGGCTGTGTGTGAAGATGGTTGGGACAGAG +
Preference number: 1 (lower is better)
Translates to: GTALGWDCCPRWVAG*CCLQWLCVKMVGTE
Trigger: CTCTGTCCCAACCATCTTCACACACAGCCACTGAAGGCAGCATCAACCAGCAACCCAGCGGGGACAGCAATCCCACCCTAGAGCCGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR GCA 90 bp GCTGGGCTTGGATGTGCTTGGGCTGCATGTCATCACAGGCCACCGTaGTGGCACCATGGGAAAAGGCAGATGAGCAGGAAGCCAGGCAGA +
Preference number: 1 (lower is better)
Translates to: AGLGCAWAACHHRPP*WHHGKRQMSRKPGR
Trigger: TCTGCCTGGCTTCCTGCTCATCTGCCTTTTCCCATGGTGCCAGCACGGTGGCCTGTGATGACATGCAGCCCAAGCACATCCAAGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR GCA 90 bp ACCTCCAGGGACGGCTCTAGGGTGGGATTGCTGTCCCCGCTGGGTTaGTGGTTGATGCTGCCTTCAGTGGCTGTGTGTGAAGATGGTTGG +
Preference number: 1 (lower is better)
Translates to: TSRDGSRVGLLSPLG*WLMLPSVAVCEDGW
Trigger: CCAACCATCTTCACACACAGCCACTGAAGGCAGCATCAACCAGCAACCCAGCGGGGACAGCAATCCCACCCTAGAGCCGTCCCTGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CCA 90 bp TCTGACTGGTCACCAGCAGCAGGTAGCCCAGAAGTGCCAGAGGTCTaGAGGACAGGGATTGGGTTGCTTGCCCTGACCCCATTCCCTGTG +
Preference number: 1 (lower is better)
Translates to: SDWSPAAGSPEVPEV*RTGIGLLALTPFPV
Trigger: CACAGGGAATGGGGTCAGGGCAAGCAACCCAATCCCTGTCCTCCAGACCTCTGGCACTTCTGGGCTACCTGCTGCTGGTGACCAGTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR TCA 90 bp GTCCTGGGAGCTGGAGCAGCTCCTTCAACATCGCCCAGCCTCTGGTaGAGGTTTGGCATCAGCAATCTGGGCTCCATGCGGTCGTCAGAA +
Preference number: 1 (lower is better)
Translates to: VLGAGAAPSTSPSLW*RFGISNLGSMRSSE
Trigger: TTCTGACGACCGCATGGAGCCCAGATTGCTGATGCCAAACCTTCACCAGAGGCTGGGCGATGTTGAAGGAGCTGCTCCAGCTCCCAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR GCA 90 bp TCCTCCTCTGCAGCTCCAGGAAGGGCAACAGCAAAGACATGTGTGTaGTGCTGTGGAAGAGTGATGGGGGTCCTGGGAGCTGGAGCAGCT +
Preference number: 1 (lower is better)
Translates to: SSSAAPGRATAKTCV*CCGRVMGVLGAGAA
Trigger: AGCTGCTCCAGCTCCCAGGACCCCCATCACTCTTCCACAGCAGCACACACATGTCTTTGCTGTTGCCCTTCCTGGAGCTGCAGAGGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CCA 90 bp AGCTGGAGCAGCTCCTTCAACATCGCCCAGCCTCTGGTGAAGGTTTaGCATCAGCAATCTGGGCTCCATGCGGTCGTCAGAATGGGCGCT +
Preference number: 1 (lower is better)
Translates to: SWSSSFNIAQPLVKV*HQQSGLHAVVRMGA
Trigger: AGCGCCCATTCTGACGACCGCATGGAGCCCAGATTGCTGATGCCAAACCTTCACCAGAGGCTGGGCGATGTTGAAGGAGCTGCTCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR TCA 90 bp TCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTaGGAGGTCTGGGGTGACAGTCTTCTCAGAGGACTGTTTTCTTGC +
Preference number: 1 (lower is better)
Translates to: SLLCLGHSPGPKEGH*EVWGDSLLRGLFSC
Trigger: GCAAGAAAACAGTCCTCTGAGAAGACTGTCACCCCAGACCTCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CCA 90 bp TGCAGCTCCAGGAAGGGCAACAGCAAAGACATGTGTGTGCTGCTGTaGAAGAGTGATGGGGGTCCTGGGAGCTGGAGCAGCTCCTTCAAC +
Preference number: 1 (lower is better)
Translates to: CSSRKGNSKDMCVLL*KSDGGPGSWSSSFN
Trigger: GTTGAAGGAGCTGCTCCAGCTCCCAGGACCCCCATCACTCTTCCACAGCAGCACACACATGTCTTTGCTGTTGCCCTTCCTGGAGCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR TCA 90 bp ATCCTGAGTTCTGTGATGGGTGCTAAGGCTGGAAGCAAAGCTCTCTaGGGAGACTCTCTTGAGGGCCACGAGCCTCTCCAGCCTGTGGAC +
Preference number: 1 (lower is better)
Translates to: ILSSVMGAKAGSKAL*GDSLEGHEPLQPVD
Trigger: GTCCACAGGCTGGAGAGGCTCGTGGCCCTCAAGAGAGTCTCCTCAGAGAGCTTTGCTTCCAGCCTTAGCACCCATCACAGAACTCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR GCA 90 bp CGCCCAGCCTCTGGTGAAGGTTTGGCATCAGCAATCTGGGCTCCATaGGGTCGTCAGAATGGGCGCTGCTATGTGTCTGTTGAGACACAA +
Preference number: 1 (lower is better)
Translates to: RPASGEGLASAIWAP*GRQNGRCYVSVETQ
Trigger: TTGTGTCTCAACAGACACATAGCAGCGCCCATTCTGACGACCGCATGGAGCCCAGATTGCTGATGCCAAACCTTCACCAGAGGCTGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CCA 90 bp GGGACAGAGTCTCTGCATCCCCAGGAAACTTTGTCACCCAAATACTaGCAGGAACAGGATCTAGGTTGTCCTCCTCTGCAGCTCCAGGAA +
Preference number: 1 (lower is better)
Translates to: GTESLHPQETLSPKY*QEQDLGCPPLQLQE
Trigger: TTCCTGGAGCTGCAGAGGAGGACAACCTAGATCCTGTTCCTGCCAGTATTTGGGTGACAAAGTTTCCTGGGGATGCAGAGACTCTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR GCA 90 bp TTGGCATCAGCAATCTGGGCTCCATGCGGTCGTCAGAATGGGCGCTaGTATGTGTCTGTTGAGACACAACAGATGATTCAATCCTTGCCC +
Preference number: 1 (lower is better)
Translates to: LASAIWAPCGRQNGR*YVSVETQQMIQSLP
Trigger: GGGCAAGGATTGAATCATCTGTTGTGTCTCAACAGACACATAGCAGCGCCCATTCTGACGACCGCATGGAGCCCAGATTGCTGATGCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR TCA 90 bp CCTCTCCCGGGTTCCTCCACTAACTGCACATTGACAGAGGCACAATaGGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGCTCTGTC +
Preference number: 1 (lower is better)
Translates to: PLPGSSTNCTLTEAQ*VPVFISYSHYLCSV
Trigger: GACAGAGCAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCTGTCAATGTGCAGTTAGTGGAGGAACCCGGGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
3UTR TCA 90 bp CGATTTGATGATCGGACACTCTTCGAGCCTGAAGGAGAAATCCCATaGAATCACGACTGCTTCTCACTGTCACTGGAATCTTGTCACCTG +
Preference number: 1 (lower is better)
Translates to: RFDDRTLFEPEGEIP*NHDCFSLSLESCHL
Trigger: CAGGTGACAAGATTCCAGTGACAGTGAGAAGCAGTCGTGATTTCATGGGATTTCTCCTTCAGGCTCGAAGAGTGTCCGATCATCAAATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR TCA 90 bp TCCACACGAATGACAGGTTTCTCTTCAGGGACTTGTCAGAGTGGGTaGCTGCATCAGCCTCTTGAAAACAAGTCATCAGTTTGGAATGAG +
Preference number: 1 (lower is better)
Translates to: STRMTGFSSGTCQSG*LHQPLENKSSVWNE
Trigger: CTCATTCCAAACTGATGACTTGTTTTCAAGAGGCTGATGCAGTCACCCACTCTGACAAGTCCCTGAAGAGAAACCTGTCATTCGTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR TCA 90 bp CTGGTGGCAATACTGGGTGTGCAGGTAGCGAAGGCCAGCGGCCAGGGCCATGCCCTGAGGAGACTCTCTTaGGGGCCACGAGCCTCTCCA +
Preference number: 2 (lower is better)
Translates to: LVAILGVQVAKASGQGHALRRLS*GPRASP
Trigger: TGGAGAGGCTCGTGGCCCTCAAGAGAGTCTCCTCAG...GGCATGGCCCTGGCCGCTGGCCTTCGCTACCTGCACACCCAGTATTGCCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR TCA 90 bp AATACTGGGTGTGCAGGTAGCGAAGGCCAGCGGCCAGGGCCATGCCCAGGGTGGCCAGCTGAGGAGTTCTaGGCTGGATACCCAGAGGGG +
Preference number: 2 (lower is better)
Translates to: NTGCAGSEGQRPGPCPGWPAEEF*AGYPEG
Trigger: CCCCTCTGGGTATCCAGCTCAGAACTCCTCAGCTGG...CCACCCTGGGCATGGCCCTGGCCGCTGGCCTTCGCTACCTGCACACCCAGTATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR CCA 90 bp AATACTGGGTGTGCAGGTAGCGAAGGCCAGCGGCCAGGGCCATGCCCAGGGTGGCACAGGCCACCGTGCTaGCACCATGGGAAAAGGCAG +
Preference number: 2 (lower is better)
Translates to: NTGCAGSEGQRPGPCPGWHRPPC*HHGKRQ
Trigger: CTGCCTTTTCCCATGGTGCCAGCACGGTGGCCTGTG...CCACCCTGGGCATGGCCCTGGCCGCTGGCCTTCGCTACCTGCACACCCAGTATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CAA 90 bp AGCCTCTCCAGCCTGTGGACCTCCAGGGACGGCTCTAGGGTGGGATaGCTGTCCCCGCTGGGTTGCTGGTTGATGCTGCCTTCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: SLSSLWTSRDGSRVG*LSPLGCWLMLPSVA
Trigger: AGCCACTGAAGGCAGCATCAACCAGCAACCCAGCGGGGACAGCAATCCCACCCTAGAGCCGTCCCTGGAGGTCCACAGGCTGGAGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR TCA 90 bp CCCTCTAGCCCAATGTCAGGCCGTGGGTTGGTCTGCCGAGGGTATCCCACTCCACCCAAGGAGGGCCACTaGGAGGTCTGGGGTGACAGT +
Preference number: 2 (lower is better)
Translates to: PSSPMSGRGLVCRGYPTPPKEGH*EVWGDS
Trigger: ACTGTCACCCCAGACCTCTCAGTGGCCCTCCTTGGG...TGGAGTGGGATACCCTCGGCAGACCAACCCACGGCCTGACATTGGGCTAGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR GCA 90 bp AATACTGGGTGTGCAGGTAGCGAAGGCCAGCGGCCAGGGCCATGCCCAGGGTGGCTGTCCCCGCTGGGTTaGTGGTTGATGCTGCCTTCA +
Preference number: 2 (lower is better)
Translates to: NTGCAGSEGQRPGPCPGWLSPLG*WLMLPS
Trigger: TGAAGGCAGCATCAACCAGCAACCCAGCGGGGACAG...CCACCCTGGGCATGGCCCTGGCCGCTGGCCTTCGCTACCTGCACACCCAGTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR GCA 90 bp CCCACAGGCTGGGCTGGGGCCTTCCACACGAATGACAGGTTTCTCTTCAGGGACCCCACGAGGGCAGCCTaGATCCTCATCCTGCCCTCT +
Preference number: 2 (lower is better)
Translates to: PTGWAGAFHTNDRFLFRDPTRAA*ILILPS
Trigger: AGAGGGCAGGATGAGGATGCAGGCTGCCCTCGTGGG...GTCCCTGAAGAGAAACCTGTCATTCGTGTGGAAGGCCCCAGCCCAGCCTGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR GCA 90 bp AATACTGGGTGTGCAGGTAGCGAAGGCCAGCGGCCAGGGCCATGCCCAGGGTGGAGGGATTGGGTTGCTTaGCCTGACCCCATTCCCTGT +
Preference number: 2 (lower is better)
Translates to: NTGCAGSEGQRPGPCPGWRDWVA*PDPIPC
Trigger: ACAGGGAATGGGGTCAGGGCAAGCAACCCAATCCCT...CCACCCTGGGCATGGCCCTGGCCGCTGGCCTTCGCTACCTGCACACCCAGTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR CCA 90 bp AATACTGGGTGTGCAGGTAGCGAAGGCCAGCGGCCAGGGCCATGCCCAGGGTGGCCTCTGGTGAAGGTTTaGCATCAGCAATCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: NTGCAGSEGQRPGPCPGWPLVKV*HQQSGL
Trigger: GAGCCCAGATTGCTGATGCCAAACCTTCACCAGAGG...CCACCCTGGGCATGGCCCTGGCCGCTGGCCTTCGCTACCTGCACACCCAGTATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CAA 90 bp GAGCTGGAGCAGCTCCTTCAACATCGCCCAGCCTCTGGTGAAGGTTaGGCATCAGCAATCTGGGCTCCATGCGGTCGTCAGAATGGGCGC +
Preference number: 2 (lower is better)
Translates to: ELEQLLQHRPASGEG*ASAIWAPCGRQNGR
Trigger: GCGCCCATTCTGACGACCGCATGGAGCCCAGATTGCTGATGCCAAACCTTCACCAGAGGCTGGGCGATGTTGAAGGAGCTGCTCCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR TCA 90 bp GAGGCCCTGGATGCCTCTGACTGGTCACCAGCAGCAGGTAGCCCAGAAGTGCCAGGAAGCAAAGCTCTCTaGGGAGACTCTCTTGAGGGC +
Preference number: 2 (lower is better)
Translates to: EALDASDWSPAAGSPEVPGSKAL*GDSLEG
Trigger: GCCCTCAAGAGAGTCTCCTCAGAGAGCTTTGCTTCC...TGGCACTTCTGGGCTACCTGCTGCTGGTGACCAGTCAGAGGCATCCAGGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR CCA 90 bp AATACTGGGTGTGCAGGTAGCGAAGGCCAGCGGCCAGGGCCATGCCCAGGGTGGGTGTGTGAAGATGGTTaGGACAGAGTCTCTGCATCC +
Preference number: 2 (lower is better)
Translates to: NTGCAGSEGQRPGPCPGWVCEDG*DRVSAS
Trigger: GGATGCAGAGACTCTGTCCCAACCATCTTCACACAC...CCACCCTGGGCATGGCCCTGGCCGCTGGCCTTCGCTACCTGCACACCCAGTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR CCA 90 bp CCTGACCCCATTCCCTGTGAAAGTTTCAGAGGACCAGAGGCACTGGGGATAGGTGGGACGGCTCTAGGGTaGGATTGCTGTCCCCGCTGG +
Preference number: 2 (lower is better)
Translates to: PDPIPCESFRGPEALGIGGTALG*DCCPRW
Trigger: CCAGCGGGGACAGCAATCCCACCCTAGAGCCGTCCC...ACCTATCCCCAGTGCCTCTGGTCCTCTGAAACTTTCACAGGGAATGGGGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR GCA 90 bp GCAAAGCAGAATTCCCAGCTGAGGAGTTCTGAGCTGGATACCCAGAGGGGCCTGCATCACAGGCCACCGTaGTGGCACCATGGGAAAAGG +
Preference number: 2 (lower is better)
Translates to: AKQNSQLRSSELDTQRGLHHRPP*WHHGKR
Trigger: CCTTTTCCCATGGTGCCAGCACGGTGGCCTGTGATG...CAGGCCCCTCTGGGTATCCAGCTCAGAACTCCTCAGCTGGGAATTCTGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR GCA 90 bp CCCTCTAGCCCAATGTCAGGCCGTGGGTTGGTCTGCCGAGGGTATCCCACTCCATCCATTTCCCTTCCCTaGTCTGAGCTCCTTGTGCTT +
Preference number: 2 (lower is better)
Translates to: PSSPMSGRGLVCRGYPTPSISLP*SELLVL
Trigger: AAGCACAAGGAGCTCAGAGCAGGGAAGGGAAATGGA...TGGAGTGGGATACCCTCGGCAGACCAACCCACGGCCTGACATTGGGCTAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR TCA 90 bp CCCACAGGCTGGGCTGGGGCCTTCCACACGAATGACAGGTTTCTCTTCAGGGACGACACTCTTCGAGCCTaGAGGAGAAATCCCATGAAA +
Preference number: 2 (lower is better)
Translates to: PTGWAGAFHTNDRFLFRDDTLRA*RRNPMK
Trigger: TTTCATGGGATTTCTCCTTCAGGCTCGAAGAGTGTC...GTCCCTGAAGAGAAACCTGTCATTCGTGTGGAAGGCCCCAGCCCAGCCTGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR GCA 90 bp TATTCTCATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCGGCTGGGCTTGGATGTaGTTGGGCTGCATGTCATCA +
Preference number: 2 (lower is better)
Translates to: YSHYLCSVWDTLQGPRRAGWAWM*LGCMSS
Trigger: TGATGACATGCAGCCCAAGCACATCCAAGCCCAGCC...GGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATGAGAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR CCA 90 bp GCAAAGCAGAATTCCCAGCTGAGGAGTTCTGAGCTGGATACCCAGAGGGGCCTGAGGGACTTGTCAGAGTaGGTGACTGCATCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: AKQNSQLRSSELDTQRGLRDLSE*VTASAS
Trigger: AGAGGCTGATGCAGTCACCCACTCTGACAAGTCCCT...CAGGCCCCTCTGGGTATCCAGCTCAGAACTCCTCAGCTGGGAATTCTGCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR CCA 90 bp TATTCTCATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCATGCGGTCGTCAGAATaGGCGCTGCTATGTGTCTGT +
Preference number: 2 (lower is better)
Translates to: YSHYLCSVWDTLQGPRRAMRSSE*ALLCVC
Trigger: ACAGACACATAGCAGCGCCCATTCTGACGACCGCAT...GGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATGAGAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CAA 90 bp AAACTGTTCTCCCCAATCTTCCTGACGTGCACAGTCTCACCACTGTaGCTCCTGGCAACAGCATCCGAAGCGGGCTCACTGAAAGACACT +
Preference number: 2 (lower is better)
Translates to: KLFSPIFLTCTVSPL*LLATASEAGSLKDT
Trigger: AGTGTCTTTCAGTGAGCCCGCTTCGGATGCTGTTGCCAGGAGCAACAGTGGTGAGACTGTGCACGTCAGGAAGATTGGGGAGAACAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR TCA 90 bp TCTCTGCATCCCCAGGAAACTTTGTCACCCAAATACTGGCAGGAACAGGATCTAGGCAGGAGGATCACTTaGATCCAGGAGGTCGAGGCT +
Preference number: 2 (lower is better)
Translates to: SLHPQETLSPKYWQEQDLGRRIT*IQEVEA
Trigger: AGCCTCGACCTCCTGGATTCAAGTGATCCTCCTGCC...TAGATCCTGTTCCTGCCAGTATTTGGGTGACAAAGTTTCCTGGGGATGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR TCA 90 bp AATGAGAACGAAAGTGCCAGCGATTTGATGATCGGACACTCTTCGAGCCTGAAGTGTGGGTGTGGATGGTaGTGTGGTGGCTGTCCTGGT +
Preference number: 2 (lower is better)
Translates to: NENESASDLMIGHSSSLKCGCGW*CGGCPG
Trigger: ACCAGGACAGCCACCACATCACCATCCACACCCACA...CTTCAGGCTCGAAGAGTGTCCGATCATCAAATCGCTGGCACTTTCGTTCTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR GCA 90 bp TATTCTCATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCGGTTCCTCCACTAACTaGACATTGACAGAGGCACAA +
Preference number: 2 (lower is better)
Translates to: YSHYLCSVWDTLQGPRRAGSSTN*TLTEAQ
Trigger: TTGTGCCTCTGTCAATGTGCAGTTAGTGGAGGAACC...GGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATGAGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
3UTR-3UTR GCA 90 bp TATTCTCATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCGTCAGAGTGGGTGACTaGATCAGCCTCTTGAAAACA +
Preference number: 2 (lower is better)
Translates to: YSHYLCSVWDTLQGPRRAVRVGD*ISLLKT
Trigger: TGTTTTCAAGAGGCTGATGCAGTCACCCACTCTGAC...GGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATGAGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR CCA 90 bp TATTCTCATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCTGGAATCTTGTCACCTaGTGCATAGGAAGTCCTGTG +
Preference number: 2 (lower is better)
Translates to: YSHYLCSVWDTLQGPRRAWNLVT*CIGSPV
Trigger: CACAGGACTTCCTATGCACCAGGTGACAAGATTCCA...GGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATGAGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR TCA 90 bp GCAAAGCAGAATTCCCAGCTGAGGAGTTCTGAGCTGGATACCCAGAGGGGCCTGGTCATCAGTTTGGAATaGGGAGGAATGAGAACGAAA +
Preference number: 2 (lower is better)
Translates to: AKQNSQLRSSELDTQRGLVISLE*GGMRTK
Trigger: TTTCGTTCTCATTCCTCCTCATTCCAAACTGATGAC...CAGGCCCCTCTGGGTATCCAGCTCAGAACTCCTCAGCTGGGAATTCTGCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR GCA 90 bp ACAGCATCCGAAGCGGGCTCACTGAAAGACACTTCTGTCTGCTGGTGGCAATACAATCTTGTCACCTGGTaGATAGGAAGTCCTGTGGGT +
Preference number: 2 (lower is better)
Translates to: TASEAGSLKDTSVCWWQYNLVTW*IGSPVG
Trigger: ACCCACAGGACTTCCTATGCACCAGGTGACAAGATT...GTATTGCCACCAGCAGACAGAAGTGTCTTTCAGTGAGCCCGCTTCGGATGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR TCA 90 bp ACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGTGGCCCCCAAGGAGGGCCACTaGGAGGTCTGGGGTGACAGT +
Preference number: 2 (lower is better)
Translates to: TVFLFLWLPYHNRGSLVAPKEGH*EVWGDS
Trigger: ACTGTCACCCCAGACCTCTCAGTGGCCCTCCTTGGG...GGCCACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000636502.1
3UTR-3UTR CCA 90 bp TCTCTGCATCCCCAGGAAACTTTGTCACCCAAATACTGGCAGGAACAGGATCTAATGTGTGTGCTGCTGTaGAAGAGTGATGGGGGTCCT +
Preference number: 2 (lower is better)
Translates to: SLHPQETLSPKYWQEQDLMCVLL*KSDGGP
Trigger: AGGACCCCCATCACTCTTCCACAGCAGCACACACAT...TAGATCCTGTTCCTGCCAGTATTTGGGTGACAAAGTTTCCTGGGGATGCAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR GCA 90 bp AATGAGAACGAAAGTGCCAGCGATTTGATGATCGGACACTCTTCGAGCCTGAAGGGTTCCTCCACTAACTaGACATTGACAGAGGCACAA +
Preference number: 2 (lower is better)
Translates to: NENESASDLMIGHSSSLKGSSTN*TLTEAQ
Trigger: TTGTGCCTCTGTCAATGTGCAGTTAGTGGAGGAACC...CTTCAGGCTCGAAGAGTGTCCGATCATCAAATCGCTGGCACTTTCGTTCTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CAA 90 bp CATCAGTTTGGAATGAGGAGGAATGAGAACGAAAGTGCCAGCGATTaGATGATCGGACACTCTTCGAGCCTGAAGGAGAAATCCCATGAA +
Preference number: 2 (lower is better)
Translates to: HQFGMRRNENESASD*MIGHSSSLKEKSHE
Trigger: TTCATGGGATTTCTCCTTCAGGCTCGAAGAGTGTCCGATCATCAAATCGCTGGCACTTTCGTTCTCATTCCTCCTCATTCCAAACTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR CCA 90 bp ATCAGCCTCTTGAAAACAAGTCATCAGTTTGGAATGAGGAGGAATGAGAACGAAGAAGTCCTGTGGGTGTaGATGGTGATGTGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: ISLLKTSHQFGMRRNENEEVLWV*MVMWWL
Trigger: CAGCCACCACATCACCATCCACACCCACAGGACTTC...TTCGTTCTCATTCCTCCTCATTCCAAACTGATGACTTGTTTTCAAGAGGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CAA 90 bp GTTTCTCTTCAGGGACTTGTCAGAGTGGGTGACTGCATCAGCCTCTaGAAAACAAGTCATCAGTTTGGAATGAGGAGGAATGAGAACGAA +
Preference number: 2 (lower is better)
Translates to: VSLQGLVRVGDCISL*KTSHQFGMRRNENE
Trigger: TTCGTTCTCATTCCTCCTCATTCCAAACTGATGACTTGTTTTCAAGAGGCTGATGCAGTCACCCACTCTGACAAGTCCCTGAAGAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR TCA 90 bp ACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGTGGCCTTGACAGAGGCACAATaGGTCCCTGTCTTCATCAGT +
Preference number: 2 (lower is better)
Translates to: TVFLFLWLPYHNRGSLVALTEAQ*VPVFIS
Trigger: ACTGATGAAGACAGGGACTCATTGTGCCTCTGTCAA...GGCCACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636502.1
3UTR CAA 90 bp GGGCGCTGCTATGTGTCTGTTGAGACACAACAGATGATTCAATCCTaGCCCAGTAAACAAAATATGACTGGACTACTGATAAAAGGAACT +
Preference number: 2 (lower is better)
Translates to: GRCYVSVETQQMIQS*PSKQNMTGLLIKGT
Trigger: AGTTCCTTTTATCAGTAGTCCAGTCATATTTTGTTTACTGGGCAAGGATTGAATCATCTGTTGTGTCTCAACAGACACATAGCAGCGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CCA 72 bp GGCTGTCCTGGTGCTGAGGCTGGGCTTGGATGTGCTTaGGCTGCATGTCATCACAGGCCACCGTGCTGGCAC +
Preference number: 3 (lower is better)
Translates to: GCPGAEAGLGCA*AACHHRPPCWH
Trigger: GTGCCAGCACGGTGGCCTGTGATGACATGCAGCCCAAGCACATCCAAGCCCAGCCTCAGCACCAGGACAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CCA 72 bp GAGACTCTCTTGAGGGCCACGAGCCTCTCCAGCCTGTaGACCTCCAGGGACGGCTCTAGGGTGGGATTGCTG +
Preference number: 3 (lower is better)
Translates to: ETLLRATSLSSL*TSRDGSRVGLL
Trigger: CAGCAATCCCACCCTAGAGCCGTCCCTGGAGGTCCACAGGCTGGAGAGGCTCGTGGCCCTCAAGAGAGTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CCA 72 bp CCTGGGCTCCCTCTAGCCCAATGTCAGGCCGTGGGTTaGTCTGCCGAGGGTATCCCACTCCACCCTCTCCAT +
Preference number: 3 (lower is better)
Translates to: PGLPLAQCQAVG*SAEGIPLHPLH
Trigger: ATGGAGAGGGTGGAGTGGGATACCCTCGGCAGACCAACCCACGGCCTGACATTGGGCTAGAGGGAGCCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR CAA 90 bp AATACTGGGTGTGCAGGTAGCGAAGGCCAGCGGCCAGGGCCATGCCCAGGGTGGGCCTCTGGTGAAGGTTaGGCATCAGCAATCTGGGCT +
Preference number: 3 (lower is better)
Translates to: NTGCAGSEGQRPGPCPGWASGEG*ASAIWA
Trigger: AGCCCAGATTGCTGATGCCAAACCTTCACCAGAGGC...CCACCCTGGGCATGGCCCTGGCCGCTGGCCTTCGCTACCTGCACACCCAGTATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR CAA 90 bp CCCTCTAGCCCAATGTCAGGCCGTGGGTTGGTCTGCCGAGGGTATCCCACTCCACCGCTGGGTTGCTGGTaGATGCTGCCTTCAGTGGCT +
Preference number: 3 (lower is better)
Translates to: PSSPMSGRGLVCRGYPTPPLGCW*MLPSVA
Trigger: AGCCACTGAAGGCAGCATCAACCAGCAACCCAGCGG...TGGAGTGGGATACCCTCGGCAGACCAACCCACGGCCTGACATTGGGCTAGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR GCA 72 bp GCTCCCTCTAGCCCAATGTCAGGCCGTGGGTTGGTCTaGCGAGGGTATCCCACTCCACCCTCTCCATTTCCC +
Preference number: 3 (lower is better)
Translates to: APSSPMSGRGLV*RGYPTPPSPFP
Trigger: GGGAAATGGAGAGGGTGGAGTGGGATACCCTCGGCAGACCAACCCACGGCCTGACATTGGGCTAGAGGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR TCA 72 bp CCCAGGGTGGCTGACAGGCAAAGCAGAATTCCCAGCTaGGGAGTTCTGAGCTGGATACCCAGAGGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: PRVADRQSRIPS*GVLSWIPRGAW
Trigger: CCAGGCCCCTCTGGGTATCCAGCTCAGAACTCCTCAGCTGGGAATTCTGCTTTGCCTGTCAGCCACCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CCA 72 bp TCACCAGCAGCAGGTAGCCCAGAAGTGCCAGAGGTCTaGAGGACAGGGATTGGGTTGCTTGCCCTGACCCCA +
Preference number: 3 (lower is better)
Translates to: SPAAGSPEVPEV*RTGIGLLALTP
Trigger: TGGGGTCAGGGCAAGCAACCCAATCCCTGTCCTCCAGACCTCTGGCACTTCTGGGCTACCTGCTGCTGGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CCA 72 bp GGTAAGAAGCTGGCAGAGGCCCTGGATGCCTCTGACTaGTCACCAGCAGCAGGTAGCCCAGAAGTGCCAGAG +
Preference number: 3 (lower is better)
Translates to: GKKLAEALDASD*SPAAGSPEVPE
Trigger: CTCTGGCACTTCTGGGCTACCTGCTGCTGGTGACCAGTCAGAGGCATCCAGGGCCTCTGCCAGCTTCTTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR CAA 90 bp CCCACAGGCTGGGCTGGGGCCTTCCACACGAATGACAGGTTTCTCTTCAGGGACAGGCAGGAGGATCACTaGAATCCAGGAGGTCGAGGC +
Preference number: 3 (lower is better)
Translates to: PTGWAGAFHTNDRFLFRDRQEDH*NPGGRG
Trigger: GCCTCGACCTCCTGGATTCAAGTGATCCTCCTGCCT...GTCCCTGAAGAGAAACCTGTCATTCGTGTGGAAGGCCCCAGCCCAGCCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR TCA 72 bp TGGGTGTGGATGGTGATGTGGTGGCTGTCCTGGTGCTaGGGCTGGGCTTGGATGTGCTTGGGCTGCATGTCA +
Preference number: 3 (lower is better)
Translates to: WVWMVMWWLSWC*GWAWMCLGCMS
Trigger: TGACATGCAGCCCAAGCACATCCAAGCCCAGCCTCAGCACCAGGACAGCCACCACATCACCATCCACACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR GCA 72 bp GACGGCTCTAGGGTGGGATTGCTGTCCCCGCTGGGTTaGTGGTTGATGCTGCCTTCAGTGGCTGTGTGTGAA +
Preference number: 3 (lower is better)
Translates to: DGSRVGLLSPLG*WLMLPSVAVCE
Trigger: TTCACACACAGCCACTGAAGGCAGCATCAACCAGCAACCCAGCGGGGACAGCAATCCCACCCTAGAGCCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR GCA 72 bp GGATGTGCTTGGGCTGCATGTCATCACAGGCCACCGTaGTGGCACCATGGGAAAAGGCAGATGAGCAGGAAG +
Preference number: 3 (lower is better)
Translates to: GCAWAACHHRPP*WHHGKRQMSRK
Trigger: CTTCCTGCTCATCTGCCTTTTCCCATGGTGCCAGCACGGTGGCCTGTGATGACATGCAGCCCAAGCACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR TCA 72 bp CTAGGGTGGGATTGCTGTCCCCGCTGGGTTGCTGGTTaGTGCTGCCTTCAGTGGCTGTGTGTGAAGATGGTT +
Preference number: 3 (lower is better)
Translates to: LGWDCCPRWVAG*CCLQWLCVKMV
Trigger: AACCATCTTCACACACAGCCACTGAAGGCAGCATCAACCAGCAACCCAGCGGGGACAGCAATCCCACCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR TCA 72 bp TCTGTGATGGGTGCTAAGGCTGGAAGCAAAGCTCTCTaGGGAGACTCTCTTGAGGGCCACGAGCCTCTCCAG +
Preference number: 3 (lower is better)
Translates to: SVMGAKAGSKAL*GDSLEGHEPLQ
Trigger: CTGGAGAGGCTCGTGGCCCTCAAGAGAGTCTCCTCAGAGAGCTTTGCTTCCAGCCTTAGCACCCATCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CCA 72 bp AGCTCCTTCAACATCGCCCAGCCTCTGGTGAAGGTTTaGCATCAGCAATCTGGGCTCCATGCGGTCGTCAGA +
Preference number: 3 (lower is better)
Translates to: SSFNIAQPLVKV*HQQSGLHAVVR
Trigger: TCTGACGACCGCATGGAGCCCAGATTGCTGATGCCAAACCTTCACCAGAGGCTGGGCGATGTTGAAGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR TCA 72 bp TGTTGCTCCTGGCAACAGCATCCGAAGCGGGCTCACTaGAAGACACTTCTGTCTGCTGGTGGCAATACTGGG +
Preference number: 3 (lower is better)
Translates to: CCSWQQHPKRAH*KTLLSAGGNTG
Trigger: CCCAGTATTGCCACCAGCAGACAGAAGTGTCTTTCAGTGAGCCCGCTTCGGATGCTGTTGCCAGGAGCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR CAA 90 bp CCTGACCCCATTCCCTGTGAAAGTTTCAGAGGACCAGAGGCACTGGGGATAGGTTTAGAGGCCTTCGTCTaGTCCTGTTCACCCCCATCT +
Preference number: 3 (lower is better)
Translates to: PDPIPCESFRGPEALGIGLEAFV*SCSPPS
Trigger: AGATGGGGGTGAACAGGACAAGACGAAGGCCTCTAA...ACCTATCCCCAGTGCCTCTGGTCCTCTGAAACTTTCACAGGGAATGGGGTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR-3UTR CAA 90 bp GAGGCCCTGGATGCCTCTGACTGGTCACCAGCAGCAGGTAGCCCAGAAGTGCCACAGATGATTCAATCCTaGCCCAGTAAACAAAATATG +
Preference number: 3 (lower is better)
Translates to: EALDASDWSPAAGSPEVPQMIQS*PSKQNM
Trigger: CATATTTTGTTTACTGGGCAAGGATTGAATCATCTG...TGGCACTTCTGGGCTACCTGCTGCTGGTGACCAGTCAGAGGCATCCAGGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR GCA 72 bp ACTGCTTCTCACTGTCACTGGAATCTTGTCACCTGGTaGATAGGAAGTCCTGTGGGTGTGGATGGTGATGTG +
Preference number: 3 (lower is better)
Translates to: TASHCHWNLVTW*IGSPVGVDGDV
Trigger: CACATCACCATCCACACCCACAGGACTTCCTATGCACCAGGTGACAAGATTCCAGTGACAGTGAGAAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR GCA 72 bp GCAATCTGGGCTCCATGCGGTCGTCAGAATGGGCGCTaGTATGTGTCTGTTGAGACACAACAGATGATTCAA +
Preference number: 3 (lower is better)
Translates to: AIWAPCGRQNGR*YVSVETQQMIQ
Trigger: TTGAATCATCTGTTGTGTCTCAACAGACACATAGCAGCGCCCATTCTGACGACCGCATGGAGCCCAGATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CCA 72 bp TCTCTGCATCCCCAGGAAACTTTGTCACCCAAATACTaGCAGGAACAGGATCTAGGTTGTCCTCCTCTGCAG +
Preference number: 3 (lower is better)
Translates to: SLHPQETLSPKY*QEQDLGCPPLQ
Trigger: CTGCAGAGGAGGACAACCTAGATCCTGTTCCTGCCAGTATTTGGGTGACAAAGTTTCCTGGGGATGCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR TCA 72 bp GATCGGACACTCTTCGAGCCTGAAGGAGAAATCCCATaGAATCACGACTGCTTCTCACTGTCACTGGAATCT +
Preference number: 3 (lower is better)
Translates to: DRTLFEPEGEIP*NHDCFSLSLES
Trigger: AGATTCCAGTGACAGTGAGAAGCAGTCGTGATTTCATGGGATTTCTCCTTCAGGCTCGAAGAGTGTCCGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR GCA 72 bp CAGGTTTCTCTTCAGGGACTTGTCAGAGTGGGTGACTaGATCAGCCTCTTGAAAACAAGTCATCAGTTTGGA +
Preference number: 3 (lower is better)
Translates to: QVSLQGLVRVGD*ISLLKTSHQFG
Trigger: TCCAAACTGATGACTTGTTTTCAAGAGGCTGATGCAGTCACCCACTCTGACAAGTCCCTGAAGAGAAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR TCA 72 bp ATGACAGGTTTCTCTTCAGGGACTTGTCAGAGTGGGTaGCTGCATCAGCCTCTTGAAAACAAGTCATCAGTT +
Preference number: 3 (lower is better)
Translates to: MTGFSSGTCQSG*LHQPLENKSSV
Trigger: AACTGATGACTTGTTTTCAAGAGGCTGATGCAGTCACCCACTCTGACAAGTCCCTGAAGAGAAACCTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR TCA 72 bp GGTTCCTCCACTAACTGCACATTGACAGAGGCACAATaGGTCCCTGTCTTCATCAGTTATTCTCATTATCTC +
Preference number: 3 (lower is better)
Translates to: GSSTNCTLTEAQ*VPVFISYSHYL
Trigger: GAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCTGTCAATGTGCAGTTAGTGGAGGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
3UTR CAA 72 bp GCCTGGGCTCCCTCTAGCCCAATGTCAGGCCGTGGGTaGGTCTGCCGAGGGTATCCCACTCCACCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: AWAPSSPMSGRG*VCRGYPTPPSP
Trigger: TGGAGAGGGTGGAGTGGGATACCCTCGGCAGACCAACCCACGGCCTGACATTGGGCTAGAGGGAGCCCAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR GCA 90 bp GGGCTCCCTCTAGCCCAATGTCAGGCCGTGGGTTGGTCTGCCGAGGGTATCCCACCCACGAGGGCAGCCTaGATCCTCATCCTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GLPLAQCQAVGWSAEGIPPTRAA*ILILPS
Trigger: AGAGGGCAGGATGAGGATGCAGGCTGCCCTCGTGGG...TGGGATACCCTCGGCAGACCAACCCACGGCCTGACATTGGGCTAGAGGGAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CCA 90 bp CTGGTGGCAATACTGGGTGTGCAGGTAGCGAAGGCCAGCGGCCAGGGCCATGCCTGTCAGGCCGTGGGTTaGTCTGCCGAGGGTATCCCA +
Preference number: 4 (lower is better)
Translates to: LVAILGVQVAKASGQGHACQAVG*SAEGIP
Trigger: TGGGATACCCTCGGCAGACCAACCCACGGCCTGACA...GGCATGGCCCTGGCCGCTGGCCTTCGCTACCTGCACACCCAGTATTGCCACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR GCA 90 bp AATACTGGGTGTGCAGGTAGCGAAGGCCAGCGGCCAGGGCCATGCCCAGGGTGGCAGGTAGCCCAGAAGTaGCAGAGGTCTGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: NTGCAGSEGQRPGPCPGWQVAQK*QRSGGQ
Trigger: CTGTCCTCCAGACCTCTGGCACTTCTGGGCTACCTG...CCACCCTGGGCATGGCCCTGGCCGCTGGCCTTCGCTACCTGCACACCCAGTATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CCA 90 bp CCCACAGGCTGGGCTGGGGCCTTCCACACGAATGACAGGTTTCTCTTCAGGGACGGGACGGCTCTAGGGTaGGATTGCTGTCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: PTGWAGAFHTNDRFLFRDGTALG*DCCPRW
Trigger: CCAGCGGGGACAGCAATCCCACCCTAGAGCCGTCCC...GTCCCTGAAGAGAAACCTGTCATTCGTGTGGAAGGCCCCAGCCCAGCCTGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp CTGGTGGCAATACTGGGTGTGCAGGTAGCGAAGGCCAGCGGCCAGGGCCATGCCTCTCCCCAATCTTCCTaGCGTGCACAGTCTCACCAC +
Preference number: 4 (lower is better)
Translates to: LVAILGVQVAKASGQGHASPQSS*RAQSHH
Trigger: GTGGTGAGACTGTGCACGTCAGGAAGATTGGGGAGA...GGCATGGCCCTGGCCGCTGGCCTTCGCTACCTGCACACCCAGTATTGCCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CCA 90 bp TCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGAGGTCTGATACCCAGAGGGGCCTaGGCTCCCTCTAGCCCAATG +
Preference number: 4 (lower is better)
Translates to: SALSGTLSRAQGGPLRGLIPRGA*APSSPM
Trigger: CATTGGGCTAGAGGGAGCCCAGGCCCCTCTGGGTAT...CAGACCTCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp TCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGAGGTCTGGGGCCATGCCCAGGGTaGCTGACAGGCAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: SALSGTLSRAQGGPLRGLGPCPG*LTGKAE
Trigger: TTCTGCTTTGCCTGTCAGCCACCCTGGGCATGGCCC...CAGACCTCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR GCA 90 bp TCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGAGGTCTGCTGTCCCCGCTGGGTTaGTGGTTGATGCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SALSGTLSRAQGGPLRGLLSPLG*WLMLPS
Trigger: TGAAGGCAGCATCAACCAGCAACCCAGCGGGGACAG...CAGACCTCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp GGGCTCCCTCTAGCCCAATGTCAGGCCGTGGGTTGGTCTGCCGAGGGTATCCCAACTGAGGTAAGAAGCTaGCAGAGGCCCTGGATGCCT +
Preference number: 4 (lower is better)
Translates to: GLPLAQCQAVGWSAEGIPTEVRS*QRPWMP
Trigger: AGGCATCCAGGGCCTCTGCCAGCTTCTTACCTCAGT...TGGGATACCCTCGGCAGACCAACCCACGGCCTGACATTGGGCTAGAGGGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp GAGGCCCTGGATGCCTCTGACTGGTCACCAGCAGCAGGTAGCCCAGAAGTGCCATCGCCCAGCCTCTGGTaGAGGTTTGGCATCAGCAAT +
Preference number: 4 (lower is better)
Translates to: EALDASDWSPAAGSPEVPSPSLW*RFGISN
Trigger: ATTGCTGATGCCAAACCTTCACCAGAGGCTGGGCGA...TGGCACTTCTGGGCTACCTGCTGCTGGTGACCAGTCAGAGGCATCCAGGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp GAGGCCCTGGATGCCTCTGACTGGTCACCAGCAGCAGGTAGCCCAGAAGTGCCACTGTTCACCCCCATCTaGGGACAGGCAAGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: EALDASDWSPAAGSPEVPLFTPI*GQASFQ
Trigger: CTGGAAACTTGCCTGTCCTCAGATGGGGGTGAACAG...TGGCACTTCTGGGCTACCTGCTGCTGGTGACCAGTCAGAGGCATCCAGGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp CCCACAGGCTGGGCTGGGGCCTTCCACACGAATGACAGGTTTCTCTTCAGGGACCATGCCCAGGGTGGCTaGCAGGCAAAGCAGAATTCC +
Preference number: 4 (lower is better)
Translates to: PTGWAGAFHTNDRFLFRDHAQGG*QAKQNS
Trigger: GGAATTCTGCTTTGCCTGTCAGCCACCCTGGGCATG...GTCCCTGAAGAGAAACCTGTCATTCGTGTGGAAGGCCCCAGCCCAGCCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp GTCACCTGGTGCATAGGAAGTCCTGTGGGTGTGGATGGTGATGTGGTGGCTGTCCCCAAGGAGGGCCACTaGGAGGTCTGGGGTGACAGT +
Preference number: 4 (lower is better)
Translates to: VTWCIGSPVGVDGDVVAVPKEGH*EVWGDS
Trigger: ACTGTCACCCCAGACCTCTCAGTGGCCCTCCTTGGG...GACAGCCACCACATCACCATCCACACCCACAGGACTTCCTATGCACCAGGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR GCA 90 bp GAGGCCCTGGATGCCTCTGACTGGTCACCAGCAGCAGGTAGCCCAGAAGTGCCAGGCTGGGCTTGGATGTaGTTGGGCTGCATGTCATCA +
Preference number: 4 (lower is better)
Translates to: EALDASDWSPAAGSPEVPGWAWM*LGCMSS
Trigger: TGATGACATGCAGCCCAAGCACATCCAAGCCCAGCC...TGGCACTTCTGGGCTACCTGCTGCTGGTGACCAGTCAGAGGCATCCAGGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR GCA 90 bp TCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGAGGTCTGAGGGATTGGGTTGCTTaGCCTGACCCCATTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SALSGTLSRAQGGPLRGLRDWVA*PDPIPC
Trigger: ACAGGGAATGGGGTCAGGGCAAGCAACCCAATCCCT...CAGACCTCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR GCA 90 bp TCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGAGGTCTGCAGTCTCACCACTGTTaGTCCTGGCAACAGCATCCG +
Preference number: 4 (lower is better)
Translates to: SALSGTLSRAQGGPLRGLQSHHC*SWQQHP
Trigger: CGGATGCTGTTGCCAGGAGCAACAGTGGTGAGACTG...CAGACCTCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR GCA 90 bp GAGGCCCTGGATGCCTCTGACTGGTCACCAGCAGCAGGTAGCCCAGAAGTGCCACAGTCTCACCACTGTTaGTCCTGGCAACAGCATCCG +
Preference number: 4 (lower is better)
Translates to: EALDASDWSPAAGSPEVPQSHHC*SWQQHP
Trigger: CGGATGCTGTTGCCAGGAGCAACAGTGGTGAGACTG...TGGCACTTCTGGGCTACCTGCTGCTGGTGACCAGTCAGAGGCATCCAGGGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CCA 90 bp CATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGCACAGGCCACCGTGCTaGCACCATGGGAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: HYLCSVWDTLQGPRRATEHRPPC*HHGKRQ
Trigger: CTGCCTTTTCCCATGGTGCCAGCACGGTGGCCTGTG...CTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp ATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGACTGAGGAGACTCTCTTaGGGGCCACGAGCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: IISALSGTLSRAQGGPLRLRRLS*GPRASP
Trigger: TGGAGAGGCTCGTGGCCCTCAAGAGAGTCTCCTCAG...TCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp GCAAAGCAGAATTCCCAGCTGAGGAGTTCTGAGCTGGATACCCAGAGGGGCCTGCCAGCTGAGGAGTTCTaGGCTGGATACCCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: AKQNSQLRSSELDTQRGLPAEEF*AGYPEG
Trigger: CCCCTCTGGGTATCCAGCTCAGAACTCCTCAGCTGG...CAGGCCCCTCTGGGTATCCAGCTCAGAACTCCTCAGCTGGGAATTCTGCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR GCA 90 bp GCAAAGCAGAATTCCCAGCTGAGGAGTTCTGAGCTGGATACCCAGAGGGGCCTGGCTCTAGGGTGGGATTaGTGTCCCCGCTGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: AKQNSQLRSSELDTQRGLALGWD*CPRWVA
Trigger: AGCAACCCAGCGGGGACAGCAATCCCACCCTAGAGC...CAGGCCCCTCTGGGTATCCAGCTCAGAACTCCTCAGCTGGGAATTCTGCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR GCA 90 bp CATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGCAGGTAGCCCAGAAGTaGCAGAGGTCTGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: HYLCSVWDTLQGPRRATEQVAQK*QRSGGQ
Trigger: CTGTCCTCCAGACCTCTGGCACTTCTGGGCTACCTG...CTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp TCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGAGGTCTGAGGGACTTGTCAGAGTaGGTGACTGCATCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SALSGTLSRAQGGPLRGLRDLSE*VTASAS
Trigger: AGAGGCTGATGCAGTCACCCACTCTGACAAGTCCCT...CAGACCTCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp TCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGAGGTCTGCCTCTGGTGAAGGTTTaGCATCAGCAATCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SALSGTLSRAQGGPLRGLPLVKV*HQQSGL
Trigger: GAGCCCAGATTGCTGATGCCAAACCTTCACCAGAGG...CAGACCTCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp GCAAAGCAGAATTCCCAGCTGAGGAGTTCTGAGCTGGATACCCAGAGGGGCCTGGGCAGGAGGATCACTTaGATCCAGGAGGTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: AKQNSQLRSSELDTQRGLGRRIT*IQEVEA
Trigger: AGCCTCGACCTCCTGGATTCAAGTGATCCTCCTGCC...CAGGCCCCTCTGGGTATCCAGCTCAGAACTCCTCAGCTGGGAATTCTGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp CCCTCTAGCCCAATGTCAGGCCGTGGGTTGGTCTGCCGAGGGTATCCCACTCCAACTTGTCAGAGTGGGTaGCTGCATCAGCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: PSSPMSGRGLVCRGYPTPTCQSG*LHQPLE
Trigger: TTCAAGAGGCTGATGCAGTCACCCACTCTGACAAGT...TGGAGTGGGATACCCTCGGCAGACCAACCCACGGCCTGACATTGGGCTAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp GGGCTCCCTCTAGCCCAATGTCAGGCCGTGGGTTGGTCTGCCGAGGGTATCCCACAGGCAAGTTTCCAGTaGATCAAAGCTGGGATCATC +
Preference number: 4 (lower is better)
Translates to: GLPLAQCQAVGWSAEGIPQASFQ*IKAGII
Trigger: GATGATCCCAGCTTTGATTCACTGGAAACTTGCCTG...TGGGATACCCTCGGCAGACCAACCCACGGCCTGACATTGGGCTAGAGGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp GAGGCCCTGGATGCCTCTGACTGGTCACCAGCAGCAGGTAGCCCAGAAGTGCCAAGCAGAATTCCCAGCTaGGGAGTTCTGAGCTGGATA +
Preference number: 4 (lower is better)
Translates to: EALDASDWSPAAGSPEVPSRIPS*GVLSWI
Trigger: TATCCAGCTCAGAACTCCTCAGCTGGGAATTCTGCT...TGGCACTTCTGGGCTACCTGCTGCTGGTGACCAGTCAGAGGCATCCAGGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp ATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGACATGCCCAGGGTGGCTaGCAGGCAAAGCAGAATTCC +
Preference number: 4 (lower is better)
Translates to: IISALSGTLSRAQGGPLRHAQGG*QAKQNS
Trigger: GGAATTCTGCTTTGCCTGTCAGCCACCCTGGGCATG...TCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR GCA 90 bp ATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGACATCACAGGCCACCGTaGTGGCACCATGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: IISALSGTLSRAQGGPLRHHRPP*WHHGKR
Trigger: CCTTTTCCCATGGTGCCAGCACGGTGGCCTGTGATG...TCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR GCA 90 bp TCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGAGGTCTGCCAATCTTCCTGACGTaGACAGTCTCACCACTGTTG +
Preference number: 4 (lower is better)
Translates to: SALSGTLSRAQGGPLRGLPIFLT*TVSPLL
Trigger: CAACAGTGGTGAGACTGTGCACGTCAGGAAGATTGG...CAGACCTCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp GAGGCCCTGGATGCCTCTGACTGGTCACCAGCAGCAGGTAGCCCAGAAGTGCCAGTGTGTGAAGATGGTTaGGACAGAGTCTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: EALDASDWSPAAGSPEVPVCEDG*DRVSAS
Trigger: GGATGCAGAGACTCTGTCCCAACCATCTTCACACAC...TGGCACTTCTGGGCTACCTGCTGCTGGTGACCAGTCAGAGGCATCCAGGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CCA 90 bp GTCACCTGGTGCATAGGAAGTCCTGTGGGTGTGGATGGTGATGTGGTGGCTGTCCTGGATGCCTCTGACTaGTCACCAGCAGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: VTWCIGSPVGVDGDVVAVLDASD*SPAAGS
Trigger: GCTACCTGCTGCTGGTGACCAGTCAGAGGCATCCAG...GACAGCCACCACATCACCATCCACACCCACAGGACTTCCTATGCACCAGGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CCA 90 bp CCTGACCCCATTCCCTGTGAAAGTTTCAGAGGACCAGAGGCACTGGGGATAGGTCCCAATGTCAGGCCGTaGGTTGGTCTGCCGAGGGTA +
Preference number: 4 (lower is better)
Translates to: PDPIPCESFRGPEALGIGPNVRP*VGLPRV
Trigger: TACCCTCGGCAGACCAACCCACGGCCTGACATTGGG...ACCTATCCCCAGTGCCTCTGGTCCTCTGAAACTTTCACAGGGAATGGGGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CCA 90 bp ATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGACACCACTGTTGCTCCTaGCAACAGCATCCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: IISALSGTLSRAQGGPLRHHCCS*QQHPKR
Trigger: CCGCTTCGGATGCTGTTGCCAGGAGCAACAGTGGTG...TCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
3UTR CAA 72 bp CAGCTCCTTCAACATCGCCCAGCCTCTGGTGAAGGTTaGGCATCAGCAATCTGGGCTCCATGCGGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: QLLQHRPASGEG*ASAIWAPCGRQ
Trigger: CTGACGACCGCATGGAGCCCAGATTGCTGATGCCAAACCTTCACCAGAGGCTGGGCGATGTTGAAGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
3UTR CAA 72 bp TCCCCAATCTTCCTGACGTGCACAGTCTCACCACTGTaGCTCCTGGCAACAGCATCCGAAGCGGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: SPIFLTCTVSPL*LLATASEAGSL
Trigger: CAGTGAGCCCGCTTCGGATGCTGTTGCCAGGAGCAACAGTGGTGAGACTGTGCACGTCAGGAAGATTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp TATTCTCATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCTGTGGGTGTGGATGGTaGTGTGGTGGCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: YSHYLCSVWDTLQGPRRACGCGW*CGGCPG
Trigger: ACCAGGACAGCCACCACATCACCATCCACACCCACA...GGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATGAGAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp CATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGTTCCCTTCCCTGCTCTaGGCTCCTTGTGCTTTGACT +
Preference number: 4 (lower is better)
Translates to: HYLCSVWDTLQGPRRATEFPSLL*APCALT
Trigger: AGTCAAAGCACAAGGAGCTCAGAGCAGGGAAGGGAA...CTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp TCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGAGGTCTGTACCCACAGAAGGAGTaGTCCAGTTGTACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SALSGTLSRAQGGPLRGLYPQKE*SSCTLL
Trigger: AAGCAGAGTACAACTGGATCACTCCTTCTGTGGGTA...CAGACCTCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR GCA 90 bp CCCTCTAGCCCAATGTCAGGCCGTGGGTTGGTCTGCCGAGGGTATCCCACTCCAGTCAGAGTGGGTGACTaGATCAGCCTCTTGAAAACA +
Preference number: 4 (lower is better)
Translates to: PSSPMSGRGLVCRGYPTPVRVGD*ISLLKT
Trigger: TGTTTTCAAGAGGCTGATGCAGTCACCCACTCTGAC...TGGAGTGGGATACCCTCGGCAGACCAACCCACGGCCTGACATTGGGCTAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CCA 90 bp ATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGATTGGCATCAGCAATCTaGGCTCCATGCGGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: IISALSGTLSRAQGGPLRLASAI*APCGRQ
Trigger: CTGACGACCGCATGGAGCCCAGATTGCTGATGCCAA...TCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp ATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGAACTGAGGTAAGAAGCTaGCAGAGGCCCTGGATGCCT +
Preference number: 4 (lower is better)
Translates to: IISALSGTLSRAQGGPLRTEVRS*QRPWMP
Trigger: AGGCATCCAGGGCCTCTGCCAGCTTCTTACCTCAGT...TCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp CAACAAAGCTCAGGAATAACTCCCTCTGTTGATGAAAGTGTCCTCTCCCGGGTTGGCCCTGGATGCCTCTaGCTGGTCACCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QQSSGITPSVDESVLSRVGPGCL*LVTSSR
Trigger: CCTGCTGCTGGTGACCAGTCAGAGGCATCCAGGGCC...AACCCGGGAGAGGACACTTTCATCAACAGAGGGAGTTATTCCTGAGCTTTGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp TCTCTGCATCCCCAGGAAACTTTGTCACCCAAATACTGGCAGGAACAGGATCTAGGCCCTGGATGCCTCTaGCTGGTCACCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SLHPQETLSPKYWQEQDLGPGCL*LVTSSR
Trigger: CCTGCTGCTGGTGACCAGTCAGAGGCATCCAGGGCC...TAGATCCTGTTCCTGCCAGTATTTGGGTGACAAAGTTTCCTGGGGATGCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp CATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGTCCTTGTGCTTTGACTaGGGTAAGAAGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: HYLCSVWDTLQGPRRATESLCFD*GKKLAE
Trigger: CTCTGCCAGCTTCTTACCTCAGTCAAAGCACAAGGA...CTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp TATTCTCATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCCCGAAGCGGGCTCACTaGAAGACACTTCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: YSHYLCSVWDTLQGPRRAPKRAH*KTLLSA
Trigger: AGCAGACAGAAGTGTCTTTCAGTGAGCCCGCTTCGG...GGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATGAGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp CCTGACCCCATTCCCTGTGAAAGTTTCAGAGGACCAGAGGCACTGGGGATAGGTCCGAAGCGGGCTCACTaGAAGACACTTCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PDPIPCESFRGPEALGIGPKRAH*KTLLSA
Trigger: AGCAGACAGAAGTGTCTTTCAGTGAGCCCGCTTCGG...ACCTATCCCCAGTGCCTCTGGTCCTCTGAAACTTTCACAGGGAATGGGGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR GCA 90 bp CATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGCGTCAGAATGGGCGCTaGTATGTGTCTGTTGAGACA +
Preference number: 4 (lower is better)
Translates to: HYLCSVWDTLQGPRRATERQNGR*YVSVET
Trigger: TGTCTCAACAGACACATAGCAGCGCCCATTCTGACG...CTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp TCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGAGGTCTGTTGTCACCCAAATACTaGCAGGAACAGGATCTAGGT +
Preference number: 4 (lower is better)
Translates to: SALSGTLSRAQGGPLRGLLSPKY*QEQDLG
Trigger: ACCTAGATCCTGTTCCTGCCAGTATTTGGGTGACAA...CAGACCTCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp CATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGGCTTCTCACTGTCACTaGAATCTTGTCACCTGGTGC +
Preference number: 4 (lower is better)
Translates to: HYLCSVWDTLQGPRRATEASHCH*NLVTWC
Trigger: GCACCAGGTGACAAGATTCCAGTGACAGTGAGAAGC...CTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp GCAAAGCAGAATTCCCAGCTGAGGAGTTCTGAGCTGGATACCCAGAGGGGCCTGATGCGGTCGTCAGAATaGGCGCTGCTATGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: AKQNSQLRSSELDTQRGLMRSSE*ALLCVC
Trigger: ACAGACACATAGCAGCGCCCATTCTGACGACCGCAT...CAGGCCCCTCTGGGTATCCAGCTCAGAACTCCTCAGCTGGGAATTCTGCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp CATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGTTGACAGAGGCACAATaGGTCCCTGTCTTCATCAGT +
Preference number: 4 (lower is better)
Translates to: HYLCSVWDTLQGPRRATELTEAQ*VPVFIS
Trigger: ACTGATGAAGACAGGGACTCATTGTGCCTCTGTCAA...CTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR GCA 90 bp GCAAAGCAGAATTCCCAGCTGAGGAGTTCTGAGCTGGATACCCAGAGGGGCCTGTCCATTTCCCTTCCCTaGTCTGAGCTCCTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: AKQNSQLRSSELDTQRGLSISLP*SELLVL
Trigger: AAGCACAAGGAGCTCAGAGCAGGGAAGGGAAATGGA...CAGGCCCCTCTGGGTATCCAGCTCAGAACTCCTCAGCTGGGAATTCTGCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR GCA 90 bp CAACAAAGCTCAGGAATAACTCCCTCTGTTGATGAAAGTGTCCTCTCCCGGGTTGGCCGTGGGTTGGTCTaGCGAGGGTATCCCACTCCA +
Preference number: 4 (lower is better)
Translates to: QQSSGITPSVDESVLSRVGRGLV*RGYPTP
Trigger: TGGAGTGGGATACCCTCGGCAGACCAACCCACGGCC...AACCCGGGAGAGGACACTTTCATCAACAGAGGGAGTTATTCCTGAGCTTTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp TATTCTCATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCTGGAATGAGGAGGAATaGGAACGAAAGTGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: YSHYLCSVWDTLQGPRRAWNEEE*ERKCQR
Trigger: TCGCTGGCACTTTCGTTCTCATTCCTCCTCATTCCA...GGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATGAGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp TATTCTCATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTTGTCAGAGTGGGTaGCTGCATCAGCCTCTTGAA +
Preference number: 4 (lower is better)
Translates to: YSHYLCSVWDTLQGPRRATCQSG*LHQPLE
Trigger: TTCAAGAGGCTGATGCAGTCACCCACTCTGACAAGT...GGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATGAGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp CAACAAAGCTCAGGAATAACTCCCTCTGTTGATGAAAGTGTCCTCTCCCGGGTTCCAGCTGAGGAGTTCTaGGCTGGATACCCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: QQSSGITPSVDESVLSRVPAEEF*AGYPEG
Trigger: CCCCTCTGGGTATCCAGCTCAGAACTCCTCAGCTGG...AACCCGGGAGAGGACACTTTCATCAACAGAGGGAGTTATTCCTGAGCTTTGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp ATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGATACCCACAGAAGGAGTaGTCCAGTTGTACTCTGCTT +
Preference number: 4 (lower is better)
Translates to: IISALSGTLSRAQGGPLRYPQKE*SSCTLL
Trigger: AAGCAGAGTACAACTGGATCACTCCTTCTGTGGGTA...TCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR GCA 90 bp CCTGACCCCATTCCCTGTGAAAGTTTCAGAGGACCAGAGGCACTGGGGATAGGTCGTCAGAATGGGCGCTaGTATGTGTCTGTTGAGACA +
Preference number: 4 (lower is better)
Translates to: PDPIPCESFRGPEALGIGRQNGR*YVSVET
Trigger: TGTCTCAACAGACACATAGCAGCGCCCATTCTGACG...ACCTATCCCCAGTGCCTCTGGTCCTCTGAAACTTTCACAGGGAATGGGGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR GCA 90 bp GCAAAGCAGAATTCCCAGCTGAGGAGTTCTGAGCTGGATACCCAGAGGGGCCTGGGTTCCTCCACTAACTaGACATTGACAGAGGCACAA +
Preference number: 4 (lower is better)
Translates to: AKQNSQLRSSELDTQRGLGSSTN*TLTEAQ
Trigger: TTGTGCCTCTGTCAATGTGCAGTTAGTGGAGGAACC...CAGGCCCCTCTGGGTATCCAGCTCAGAACTCCTCAGCTGGGAATTCTGCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CCA 90 bp TATTCTCATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCGTGTGTGAAGATGGTTaGGACAGAGTCTCTGCATCC +
Preference number: 4 (lower is better)
Translates to: YSHYLCSVWDTLQGPRRAVCEDG*DRVSAS
Trigger: GGATGCAGAGACTCTGTCCCAACCATCTTCACACAC...GGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATGAGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp TATTCTCATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCTCAGGCTTGATAGAATaGCTTCCTCCCGCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: YSHYLCSVWDTLQGPRRASGLIE*LPPAEL
Trigger: CAACTCTGCGGGAGGAAGCCATTCTATCAAGCCTGA...GGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATGAGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp CAACAAAGCTCAGGAATAACTCCCTCTGTTGATGAAAGTGTCCTCTCCCGGGTTCCCAATGTCAGGCCGTaGGTTGGTCTGCCGAGGGTA +
Preference number: 4 (lower is better)
Translates to: QQSSGITPSVDESVLSRVPNVRP*VGLPRV
Trigger: TACCCTCGGCAGACCAACCCACGGCCTGACATTGGG...AACCCGGGAGAGGACACTTTCATCAACAGAGGGAGTTATTCCTGAGCTTTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp TATTCTCATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCGGCTGCAGTGAGTTATaGTCACATCACTACACTCCA +
Preference number: 4 (lower is better)
Translates to: YSHYLCSVWDTLQGPRRAGCSEL*SHHYTP
Trigger: TGGAGTGTAGTGATGTGATCATAACTCACTGCAGCC...GGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATGAGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp TCTCTGCATCCCCAGGAAACTTTGTCACCCAAATACTGGCAGGAACAGGATCTATGTGGGTGTGGATGGTaGTGTGGTGGCTGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SLHPQETLSPKYWQEQDLCGCGW*CGGCPG
Trigger: ACCAGGACAGCCACCACATCACCATCCACACCCACA...TAGATCCTGTTCCTGCCAGTATTTGGGTGACAAAGTTTCCTGGGGATGCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CCA 90 bp AGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGCTCTGTGGGACGGCTCTAGGGTaGGATTGCTGTCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RGTMSPCLHQLFSLSLLCGTALG*DCCPRW
Trigger: CCAGCGGGGACAGCAATCCCACCCTAGAGCCGTCCC...ACAGAGCAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp CCTGACCCCATTCCCTGTGAAAGTTTCAGAGGACCAGAGGCACTGGGGATAGGTGAAGGAGAAATCCCATaGAATCACGACTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PDPIPCESFRGPEALGIGEGEIP*NHDCFS
Trigger: TGAGAAGCAGTCGTGATTTCATGGGATTTCTCCTTC...ACCTATCCCCAGTGCCTCTGGTCCTCTGAAACTTTCACAGGGAATGGGGTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp ATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGATTGAGACACAACAGATaGTTCAATCCTTGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: IISALSGTLSRAQGGPLRLRHNR*FNPCPV
Trigger: TACTGGGCAAGGATTGAATCATCTGTTGTGTCTCAA...TCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp TCTCTGCATCCCCAGGAAACTTTGTCACCCAAATACTGGCAGGAACAGGATCTATTGGCATCAGCAATCTaGGCTCCATGCGGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: SLHPQETLSPKYWQEQDLLASAI*APCGRQ
Trigger: CTGACGACCGCATGGAGCCCAGATTGCTGATGCCAA...TAGATCCTGTTCCTGCCAGTATTTGGGTGACAAAGTTTCCTGGGGATGCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp CAACAAAGCTCAGGAATAACTCCCTCTGTTGATGAAAGTGTCCTCTCCCGGGTTTTCCCTTCCCTGCTCTaGGCTCCTTGTGCTTTGACT +
Preference number: 4 (lower is better)
Translates to: QQSSGITPSVDESVLSRVFPSLL*APCALT
Trigger: AGTCAAAGCACAAGGAGCTCAGAGCAGGGAAGGGAA...AACCCGGGAGAGGACACTTTCATCAACAGAGGGAGTTATTCCTGAGCTTTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp GCAAAGCAGAATTCCCAGCTGAGGAGTTCTGAGCTGGATACCCAGAGGGGCCTGCAGTTGTACTCTGCTTaGACCAAAACAAAACTGTTC +
Preference number: 4 (lower is better)
Translates to: AKQNSQLRSSELDTQRGLQLYSA*TKTKLF
Trigger: GAACAGTTTTGTTTTGGTTCAAGCAGAGTACAACTG...CAGGCCCCTCTGGGTATCCAGCTCAGAACTCCTCAGCTGGGAATTCTGCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CCA 90 bp CAACAAAGCTCAGGAATAACTCCCTCTGTTGATGAAAGTGTCCTCTCCCGGGTTAGGGACTTGTCAGAGTaGGTGACTGCATCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: QQSSGITPSVDESVLSRVRDLSE*VTASAS
Trigger: AGAGGCTGATGCAGTCACCCACTCTGACAAGTCCCT...AACCCGGGAGAGGACACTTTCATCAACAGAGGGAGTTATTCCTGAGCTTTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp CTTAGTGGCCACAGGGGTCTAGTTAATGAGCGGGTTATACAATATTCATTGTGTTGTCAGGCCGTGGGTTaGTCTGCCGAGGGTATCCCA +
Preference number: 4 (lower is better)
Translates to: LSGHRGLVNERVIQYSLCCQAVG*SAEGIP
Trigger: TGGGATACCCTCGGCAGACCAACCCACGGCCTGACA...ACACAATGAATATTGTATAACCCGCTCATTAACTAGACCCCTGTGGCCACTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
3UTR CAA 72 bp ATGGTTGGGACAGAGTCTCTGCATCCCCAGGAAACTTaGTCACCCAAATACTGGCAGGAACAGGATCTAGGT +
Preference number: 4 (lower is better)
Translates to: MVGTESLHPQET*SPKYWQEQDLG
Trigger: ACCTAGATCCTGTTCCTGCCAGTATTTGGGTGACAAAGTTTCCTGGGGATGCAGAGACTCTGTCCCAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp ATTGACAGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGCTGAGGAGACTCTCTTaGGGGCCACGAGCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: IDRGTMSPCLHQLFSLSLLRRLS*GPRASP
Trigger: TGGAGAGGCTCGTGGCCCTCAAGAGAGTCTCCTCAG...CAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCTGTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp ACAGCATCCGAAGCGGGCTCACTGAAAGACACTTCTGTCTGCTGGTGGCAATACGTCATCAGTTTGGAATaGGGAGGAATGAGAACGAAA +
Preference number: 4 (lower is better)
Translates to: TASEAGSLKDTSVCWWQYVISLE*GGMRTK
Trigger: TTTCGTTCTCATTCCTCCTCATTCCAAACTGATGAC...GTATTGCCACCAGCAGACAGAAGTGTCTTTCAGTGAGCCCGCTTCGGATGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR GCA 90 bp ACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGTGGCCGCTCTAGGGTGGGATTaGTGTCCCCGCTGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: TVFLFLWLPYHNRGSLVAALGWD*CPRWVA
Trigger: AGCAACCCAGCGGGGACAGCAATCCCACCCTAGAGC...GGCCACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR CCA 90 bp ATTGACAGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGGGGGGTCCTGGGAGCTaGAGCAGCTCCTTCAACATC +
Preference number: 4 (lower is better)
Translates to: IDRGTMSPCLHQLFSLSLGGPGS*SSSFNI
Trigger: GATGTTGAAGGAGCTGCTCCAGCTCCCAGGACCCCC...CAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCTGTCAAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp ATTGACAGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGATACCCAGAGGGGCCTaGGCTCCCTCTAGCCCAATG +
Preference number: 4 (lower is better)
Translates to: IDRGTMSPCLHQLFSLSLIPRGA*APSSPM
Trigger: CATTGGGCTAGAGGGAGCCCAGGCCCCTCTGGGTAT...CAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCTGTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp GGGACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGTGGGGCCATGCCCAGGGTaGCTGACAGGCAAAGCAGAA +
Preference number: 4 (lower is better)
Translates to: GTVFLFLWLPYHNRGSLVGPCPG*LTGKAE
Trigger: TTCTGCTTTGCCTGTCAGCCACCCTGGGCATGGCCC...CACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636502.1
3UTR CAA 72 bp GGAATGAGGAGGAATGAGAACGAAAGTGCCAGCGATTaGATGATCGGACACTCTTCGAGCCTGAAGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GMRRNENESASD*MIGHSSSLKEK
Trigger: TTTCTCCTTCAGGCTCGAAGAGTGTCCGATCATCAAATCGCTGGCACTTTCGTTCTCATTCCTCCTCATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp CTTAGTGGCCACAGGGGTCTAGTTAATGAGCGGGTTATACAATATTCATTGTGTGGAAGCAAAGCTCTCTaGGGAGACTCTCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LSGHRGLVNERVIQYSLCGSKAL*GDSLEG
Trigger: GCCCTCAAGAGAGTCTCCTCAGAGAGCTTTGCTTCC...ACACAATGAATATTGTATAACCCGCTCATTAACTAGACCCCTGTGGCCACTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp CTTAGTGGCCACAGGGGTCTAGTTAATGAGCGGGTTATACAATATTCATTGTGTCTGTTCACCCCCATCTaGGGACAGGCAAGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LSGHRGLVNERVIQYSLCLFTPI*GQASFQ
Trigger: CTGGAAACTTGCCTGTCCTCAGATGGGGGTGAACAG...ACACAATGAATATTGTATAACCCGCTCATTAACTAGACCCCTGTGGCCACTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp AGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGCTCTGTTCTCCCCAATCTTCCTaGCGTGCACAGTCTCACCAC +
Preference number: 4 (lower is better)
Translates to: RGTMSPCLHQLFSLSLLCSPQSS*RAQSHH
Trigger: GTGGTGAGACTGTGCACGTCAGGAAGATTGGGGAGA...ACAGAGCAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR GCA 90 bp ACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGTGGCCCTGTCCCCGCTGGGTTaGTGGTTGATGCTGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TVFLFLWLPYHNRGSLVALSPLG*WLMLPS
Trigger: TGAAGGCAGCATCAACCAGCAACCCAGCGGGGACAG...GGCCACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR GCA 90 bp GGAGGGACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTACATCACAGGCCACCGTaGTGGCACCATGGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: GGTVFLFLWLPYHNRGSLHHRPP*WHHGKR
Trigger: CCTTTTCCCATGGTGCCAGCACGGTGGCCTGTGATG...TAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGTCCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR GCA 90 bp AGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGCTCTGTAGGGATTGGGTTGCTTaGCCTGACCCCATTCCCTGT +
Preference number: 4 (lower is better)
Translates to: RGTMSPCLHQLFSLSLLCRDWVA*PDPIPC
Trigger: ACAGGGAATGGGGTCAGGGCAAGCAACCCAATCCCT...ACAGAGCAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp CTTAGTGGCCACAGGGGTCTAGTTAATGAGCGGGTTATACAATATTCATTGTGTGAAGTCCTGTGGGTGTaGATGGTGATGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LSGHRGLVNERVIQYSLCEVLWV*MVMWWL
Trigger: CAGCCACCACATCACCATCCACACCCACAGGACTTC...ACACAATGAATATTGTATAACCCGCTCATTAACTAGACCCCTGTGGCCACTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp GGAGGGACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTACTGGATGCCTCTGACTaGTCACCAGCAGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: GGTVFLFLWLPYHNRGSLLDASD*SPAAGS
Trigger: GCTACCTGCTGCTGGTGACCAGTCAGAGGCATCCAG...TAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGTCCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR CCA 90 bp GGAGGGACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTACACCACTGTTGCTCCTaGCAACAGCATCCGAAGCGG +
Preference number: 4 (lower is better)
Translates to: GGTVFLFLWLPYHNRGSLHHCCS*QQHPKR
Trigger: CCGCTTCGGATGCTGTTGCCAGGAGCAACAGTGGTG...TAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGTCCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR TCA 90 bp ATCAGCCTCTTGAAAACAAGTCATCAGTTTGGAATGAGGAGGAATGAGAACGAAGGAAGCAAAGCTCTCTaGGGAGACTCTCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: ISLLKTSHQFGMRRNENEGSKAL*GDSLEG
Trigger: GCCCTCAAGAGAGTCTCCTCAGAGAGCTTTGCTTCC...TTCGTTCTCATTCCTCCTCATTCCAAACTGATGACTTGTTTTCAAGAGGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp GGGACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGTGTCGCCCAGCCTCTGGTaGAGGTTTGGCATCAGCAAT +
Preference number: 4 (lower is better)
Translates to: GTVFLFLWLPYHNRGSLVSPSLW*RFGISN
Trigger: ATTGCTGATGCCAAACCTTCACCAGAGGCTGGGCGA...CACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR GCA 90 bp GGAGGGACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGGCTGGGCTTGGATGTaGTTGGGCTGCATGTCATCA +
Preference number: 4 (lower is better)
Translates to: GGTVFLFLWLPYHNRGSLGWAWM*LGCMSS
Trigger: TGATGACATGCAGCCCAAGCACATCCAAGCCCAGCC...TAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGTCCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR CCA 90 bp AGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGCTCTGTATGTGTGTGCTGCTGTaGAAGAGTGATGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: RGTMSPCLHQLFSLSLLCMCVLL*KSDGGP
Trigger: AGGACCCCCATCACTCTTCCACAGCAGCACACACAT...ACAGAGCAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp CAACAAAGCTCAGGAATAACTCCCTCTGTTGATGAAAGTGTCCTCTCCCGGGTTCCAGTGAATCAAAGCTaGGATCATCCTGAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: QQSSGITPSVDESVLSRVPVNQS*DHPEFC
Trigger: ACAGAACTCAGGATGATCCCAGCTTTGATTCACTGG...AACCCGGGAGAGGACACTTTCATCAACAGAGGGAGTTATTCCTGAGCTTTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp ACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGTGGCCGAAGTCCTGTGGGTGTaGATGGTGATGTGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: TVFLFLWLPYHNRGSLVAEVLWV*MVMWWL
Trigger: CAGCCACCACATCACCATCCACACCCACAGGACTTC...GGCCACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636502.1
3UTR CAA 72 bp CAGGGACTTGTCAGAGTGGGTGACTGCATCAGCCTCTaGAAAACAAGTCATCAGTTTGGAATGAGGAGGAAT +
Preference number: 4 (lower is better)
Translates to: QGLVRVGDCISL*KTSHQFGMRRN
Trigger: ATTCCTCCTCATTCCAAACTGATGACTTGTTTTCAAGAGGCTGATGCAGTCACCCACTCTGACAAGTCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp AGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGCTCTGTTCCTTGTGCTTTGACTaGGGTAAGAAGCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RGTMSPCLHQLFSLSLLCSLCFD*GKKLAE
Trigger: CTCTGCCAGCTTCTTACCTCAGTCAAAGCACAAGGA...ACAGAGCAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp ACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGTGGCCATGTGTGTGCTGCTGTaGAAGAGTGATGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: TVFLFLWLPYHNRGSLVAMCVLL*KSDGGP
Trigger: AGGACCCCCATCACTCTTCCACAGCAGCACACACAT...GGCCACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR CCA 90 bp AGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGCTCTGTTCAGGCTTGATAGAATaGCTTCCTCCCGCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: RGTMSPCLHQLFSLSLLCSGLIE*LPPAEL
Trigger: CAACTCTGCGGGAGGAAGCCATTCTATCAAGCCTGA...ACAGAGCAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp ATTGACAGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGATGCGGTCGTCAGAATaGGCGCTGCTATGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: IDRGTMSPCLHQLFSLSLMRSSE*ALLCVC
Trigger: ACAGACACATAGCAGCGCCCATTCTGACGACCGCAT...CAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCTGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp ACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGTGGCCCCTCTGGTGAAGGTTTaGCATCAGCAATCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: TVFLFLWLPYHNRGSLVAPLVKV*HQQSGL
Trigger: GAGCCCAGATTGCTGATGCCAAACCTTCACCAGAGG...GGCCACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR TCA 90 bp ACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGTGGCCTGGAATGAGGAGGAATaGGAACGAAAGTGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: TVFLFLWLPYHNRGSLVAWNEEE*ERKCQR
Trigger: TCGCTGGCACTTTCGTTCTCATTCCTCCTCATTCCA...GGCCACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR TCA 90 bp ACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGTGGCCAGCAGAATTCCCAGCTaGGGAGTTCTGAGCTGGATA +
Preference number: 4 (lower is better)
Translates to: TVFLFLWLPYHNRGSLVASRIPS*GVLSWI
Trigger: TATCCAGCTCAGAACTCCTCAGCTGGGAATTCTGCT...GGCCACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR TCA 90 bp CAACAAAGCTCAGGAATAACTCCCTCTGTTGATGAAAGTGTCCTCTCCCGGGTTCAGTTGTACTCTGCTTaGACCAAAACAAAACTGTTC +
Preference number: 4 (lower is better)
Translates to: QQSSGITPSVDESVLSRVQLYSA*TKTKLF
Trigger: GAACAGTTTTGTTTTGGTTCAAGCAGAGTACAACTG...AACCCGGGAGAGGACACTTTCATCAACAGAGGGAGTTATTCCTGAGCTTTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR GCA 90 bp ACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGTGGCCTCCATTTCCCTTCCCTaGTCTGAGCTCCTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: TVFLFLWLPYHNRGSLVASISLP*SELLVL
Trigger: AAGCACAAGGAGCTCAGAGCAGGGAAGGGAAATGGA...GGCCACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR GCA 90 bp ATCAGCCTCTTGAAAACAAGTCATCAGTTTGGAATGAGGAGGAATGAGAACGAACCAATCTTCCTGACGTaGACAGTCTCACCACTGTTG +
Preference number: 4 (lower is better)
Translates to: ISLLKTSHQFGMRRNENEPIFLT*TVSPLL
Trigger: CAACAGTGGTGAGACTGTGCACGTCAGGAAGATTGG...TTCGTTCTCATTCCTCCTCATTCCAAACTGATGACTTGTTTTCAAGAGGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CCA 90 bp CTTAGTGGCCACAGGGGTCTAGTTAATGAGCGGGTTATACAATATTCATTGTGTTGGAATCTTGTCACCTaGTGCATAGGAAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: LSGHRGLVNERVIQYSLCWNLVT*CIGSPV
Trigger: CACAGGACTTCCTATGCACCAGGTGACAAGATTCCA...ACACAATGAATATTGTATAACCCGCTCATTAACTAGACCCCTGTGGCCACTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp ATCAGCCTCTTGAAAACAAGTCATCAGTTTGGAATGAGGAGGAATGAGAACGAAGCTTCTCACTGTCACTaGAATCTTGTCACCTGGTGC +
Preference number: 4 (lower is better)
Translates to: ISLLKTSHQFGMRRNENEASHCH*NLVTWC
Trigger: GCACCAGGTGACAAGATTCCAGTGACAGTGAGAAGC...TTCGTTCTCATTCCTCCTCATTCCAAACTGATGACTTGTTTTCAAGAGGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp ATTGACAGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGAGGTCGAGGCTGCAGTaGGTTATGATCACATCACTA +
Preference number: 4 (lower is better)
Translates to: IDRGTMSPCLHQLFSLSLRSRLQ*VMITSL
Trigger: TAGTGATGTGATCATAACTCACTGCAGCCTCGACCT...CAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCTGTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp GGAGGGACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGACACTCTTCGAGCCTaGAGGAGAAATCCCATGAAA +
Preference number: 4 (lower is better)
Translates to: GGTVFLFLWLPYHNRGSLDTLRA*RRNPMK
Trigger: TTTCATGGGATTTCTCCTTCAGGCTCGAAGAGTGTC...TAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGTCCCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR TCA 90 bp ATCAGCCTCTTGAAAACAAGTCATCAGTTTGGAATGAGGAGGAATGAGAACGAAGACACTCTTCGAGCCTaGAGGAGAAATCCCATGAAA +
Preference number: 4 (lower is better)
Translates to: ISLLKTSHQFGMRRNENEDTLRA*RRNPMK
Trigger: TTTCATGGGATTTCTCCTTCAGGCTCGAAGAGTGTC...TTCGTTCTCATTCCTCCTCATTCCAAACTGATGACTTGTTTTCAAGAGGCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp GGGACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGTGCAGGCAAGTTTCCAGTaGATCAAAGCTGGGATCATC +
Preference number: 4 (lower is better)
Translates to: GTVFLFLWLPYHNRGSLVQASFQ*IKAGII
Trigger: GATGATCCCAGCTTTGATTCACTGGAAACTTGCCTG...CACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR TCA 90 bp ATTGACAGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGTTGACAGAGGCACAATaGGTCCCTGTCTTCATCAGT +
Preference number: 4 (lower is better)
Translates to: IDRGTMSPCLHQLFSLSLLTEAQ*VPVFIS
Trigger: ACTGATGAAGACAGGGACTCATTGTGCCTCTGTCAA...CAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCTGTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR GCA 90 bp ACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGTGGCCAATCTTGTCACCTGGTaGATAGGAAGTCCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: TVFLFLWLPYHNRGSLVANLVTW*IGSPVG
Trigger: ACCCACAGGACTTCCTATGCACCAGGTGACAAGATT...GGCCACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR GCA 90 bp ATTGACAGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGAATCTTGTCACCTGGTaGATAGGAAGTCCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: IDRGTMSPCLHQLFSLSLNLVTW*IGSPVG
Trigger: ACCCACAGGACTTCCTATGCACCAGGTGACAAGATT...CAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCTGTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR GCA 90 bp ATTGACAGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGGTCAGAGTGGGTGACTaGATCAGCCTCTTGAAAACA +
Preference number: 4 (lower is better)
Translates to: IDRGTMSPCLHQLFSLSLVRVGD*ISLLKT
Trigger: TGTTTTCAAGAGGCTGATGCAGTCACCCACTCTGAC...CAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCTGTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR GCA 90 bp GGAGGGACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGGTTCCTCCACTAACTaGACATTGACAGAGGCACAA +
Preference number: 4 (lower is better)
Translates to: GGTVFLFLWLPYHNRGSLGSSTN*TLTEAQ
Trigger: TTGTGCCTCTGTCAATGTGCAGTTAGTGGAGGAACC...TAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGTCCCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR CCA 90 bp AGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGCTCTGTTTGTCACCCAAATACTaGCAGGAACAGGATCTAGGT +
Preference number: 4 (lower is better)
Translates to: RGTMSPCLHQLFSLSLLCLSPKY*QEQDLG
Trigger: ACCTAGATCCTGTTCCTGCCAGTATTTGGGTGACAA...ACAGAGCAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CCA 90 bp ATCAGCCTCTTGAAAACAAGTCATCAGTTTGGAATGAGGAGGAATGAGAACGAATGGAATCTTGTCACCTaGTGCATAGGAAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: ISLLKTSHQFGMRRNENEWNLVT*CIGSPV
Trigger: CACAGGACTTCCTATGCACCAGGTGACAAGATTCCA...TTCGTTCTCATTCCTCCTCATTCCAAACTGATGACTTGTTTTCAAGAGGCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR TCA 90 bp GGAGGGACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGAAGGAGAAATCCCATaGAATCACGACTGCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GGTVFLFLWLPYHNRGSLEGEIP*NHDCFS
Trigger: TGAGAAGCAGTCGTGATTTCATGGGATTTCTCCTTC...TAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGTCCCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR CCA 90 bp ATTGACAGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGCCAGTGAATCAAAGCTaGGATCATCCTGAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: IDRGTMSPCLHQLFSLSLPVNQS*DHPEFC
Trigger: ACAGAACTCAGGATGATCCCAGCTTTGATTCACTGG...CAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCTGTCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR TCA 90 bp ACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGTGGCCGTCATCAGTTTGGAATaGGGAGGAATGAGAACGAAA +
Preference number: 4 (lower is better)
Translates to: TVFLFLWLPYHNRGSLVAVISLE*GGMRTK
Trigger: TTTCGTTCTCATTCCTCCTCATTCCAAACTGATGAC...GGCCACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636502.1
3UTR CAA 72 bp TATGTGTCTGTTGAGACACAACAGATGATTCAATCCTaGCCCAGTAAACAAAATATGACTGGACTACTGATA +
Preference number: 4 (lower is better)
Translates to: YVSVETQQMIQS*PSKQNMTGLLI
Trigger: TATCAGTAGTCCAGTCATATTTTGTTTACTGGGCAAGGATTGAATCATCTGTTGTGTCTCAACAGACACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CAA 90 bp TCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGAGGTCTGCCGCTGGGTTGCTGGTaGATGCTGCCTTCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: SALSGTLSRAQGGPLRGLPLGCW*MLPSVA
Trigger: AGCCACTGAAGGCAGCATCAACCAGCAACCCAGCGG...CAGACCTCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CAA 90 bp CCCTCTAGCCCAATGTCAGGCCGTGGGTTGGTCTGCCGAGGGTATCCCACTCCAAGGCAGGAGGATCACTaGAATCCAGGAGGTCGAGGC +
Preference number: 5 (lower is better)
Translates to: PSSPMSGRGLVCRGYPTPRQEDH*NPGGRG
Trigger: GCCTCGACCTCCTGGATTCAAGTGATCCTCCTGCCT...TGGAGTGGGATACCCTCGGCAGACCAACCCACGGCCTGACATTGGGCTAGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CAA 90 bp TATTCTCATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCATGTCAGGCCGTGGGTaGGTCTGCCGAGGGTATCCC +
Preference number: 5 (lower is better)
Translates to: YSHYLCSVWDTLQGPRRAMSGRG*VCRGYP
Trigger: GGGATACCCTCGGCAGACCAACCCACGGCCTGACAT...GGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATGAGAATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CAA 90 bp GGGCTCCCTCTAGCCCAATGTCAGGCCGTGGGTTGGTCTGCCGAGGGTATCCCACAGAGGACTGTTTTCTaGCTACCCACAGAAGGAGTG +
Preference number: 5 (lower is better)
Translates to: GLPLAQCQAVGWSAEGIPQRTVF*LPTEGV
Trigger: CACTCCTTCTGTGGGTAGCAAGAAAACAGTCCTCTG...TGGGATACCCTCGGCAGACCAACCCACGGCCTGACATTGGGCTAGAGGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CAA 90 bp CATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGGGAACAGGATCTAGGTaGTCCTCCTCTGCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: HYLCSVWDTLQGPRRATEGTGSR*SSSAAP
Trigger: TGGAGCTGCAGAGGAGGACAACCTAGATCCTGTTCC...CTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CAA 90 bp CCCTCTAGCCCAATGTCAGGCCGTGGGTTGGTCTGCCGAGGGTATCCCACTCCACATCCCCAGGAAACTTaGTCACCCAAATACTGGCAG +
Preference number: 5 (lower is better)
Translates to: PSSPMSGRGLVCRGYPTPHPQET*SPKYWQ
Trigger: CTGCCAGTATTTGGGTGACAAAGTTTCCTGGGGATG...TGGAGTGGGATACCCTCGGCAGACCAACCCACGGCCTGACATTGGGCTAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CAA 90 bp TCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGAGGTCTGTTTCTCTTCAGGGACTaGTCAGAGTGGGTGACTGCA +
Preference number: 5 (lower is better)
Translates to: SALSGTLSRAQGGPLRGLFLFRD*SEWVTA
Trigger: TGCAGTCACCCACTCTGACAAGTCCCTGAAGAGAAA...CAGACCTCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CAA 90 bp CATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGACAGTCTCACCACTGTaGCTCCTGGCAACAGCATCC +
Preference number: 5 (lower is better)
Translates to: HYLCSVWDTLQGPRRATETVSPL*LLATAS
Trigger: GGATGCTGTTGCCAGGAGCAACAGTGGTGAGACTGT...CTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CAA 90 bp ATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGAGGAACAGGATCTAGGTaGTCCTCCTCTGCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: IISALSGTLSRAQGGPLRGTGSR*SSSAAP
Trigger: TGGAGCTGCAGAGGAGGACAACCTAGATCCTGTTCC...TCTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CAA 90 bp TATTCTCATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCAGGACAGGGATTGGGTaGCTTGCCCTGACCCCATTC +
Preference number: 5 (lower is better)
Translates to: YSHYLCSVWDTLQGPRRARTGIG*LALTPF
Trigger: GAATGGGGTCAGGGCAAGCAACCCAATCCCTGTCCT...GGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATGAGAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CAA 90 bp CCTGACCCCATTCCCTGTGAAAGTTTCAGAGGACCAGAGGCACTGGGGATAGGTAGGACAGGGATTGGGTaGCTTGCCCTGACCCCATTC +
Preference number: 5 (lower is better)
Translates to: PDPIPCESFRGPEALGIGRTGIG*LALTPF
Trigger: GAATGGGGTCAGGGCAAGCAACCCAATCCCTGTCCT...ACCTATCCCCAGTGCCTCTGGTCCTCTGAAACTTTCACAGGGAATGGGGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CAA 90 bp TATTCTCATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCGCCTCTGGTGAAGGTTaGGCATCAGCAATCTGGGCT +
Preference number: 5 (lower is better)
Translates to: YSHYLCSVWDTLQGPRRAASGEG*ASAIWA
Trigger: AGCCCAGATTGCTGATGCCAAACCTTCACCAGAGGC...GGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATGAGAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CAA 90 bp CATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCACTGAGCAGAGGACTGTTTTCTaGCTACCCACAGAAGGAGTG +
Preference number: 5 (lower is better)
Translates to: HYLCSVWDTLQGPRRATEQRTVF*LPTEGV
Trigger: CACTCCTTCTGTGGGTAGCAAGAAAACAGTCCTCTG...CTCAGTGGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CAA 90 bp TATTCTCATTATCTCTGCTCTGTCTGGGACACTCTCCAGGGCCCAAGGAGGGCCCATCCCCAGGAAACTTaGTCACCCAAATACTGGCAG +
Preference number: 5 (lower is better)
Translates to: YSHYLCSVWDTLQGPRRAHPQET*SPKYWQ
Trigger: CTGCCAGTATTTGGGTGACAAAGTTTCCTGGGGATG...GGCCCTCCTTGGGCCCTGGAGAGTGTCCCAGACAGAGCAGAGATAATGAGAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CAA 90 bp GGGCTCCCTCTAGCCCAATGTCAGGCCGTGGGTTGGTCTGCCGAGGGTATCCCACAGATGATTCAATCCTaGCCCAGTAAACAAAATATG +
Preference number: 5 (lower is better)
Translates to: GLPLAQCQAVGWSAEGIPQMIQS*PSKQNM
Trigger: CATATTTTGTTTACTGGGCAAGGATTGAATCATCTG...TGGGATACCCTCGGCAGACCAACCCACGGCCTGACATTGGGCTAGAGGGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CAA 90 bp GGGACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGTGGCTGTCCCCGCTGGGTaGCTGGTTGATGCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: GTVFLFLWLPYHNRGSLVAVPAG*LVDAAF
Trigger: GAAGGCAGCATCAACCAGCAACCCAGCGGGGACAGC...CACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR CAA 90 bp ATTGACAGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGGCTGTCCCCGCTGGGTaGCTGGTTGATGCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: IDRGTMSPCLHQLFSLSLAVPAG*LVDAAF
Trigger: GAAGGCAGCATCAACCAGCAACCCAGCGGGGACAGC...CAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCTGTCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CAA 90 bp AATGAGAACGAAAGTGCCAGCGATTTGATGATCGGACACTCTTCGAGCCTGAAGTTAGAGGCCTTCGTCTaGTCCTGTTCACCCCCATCT +
Preference number: 5 (lower is better)
Translates to: NENESASDLMIGHSSSLKLEAFV*SCSPPS
Trigger: AGATGGGGGTGAACAGGACAAGACGAAGGCCTCTAA...CTTCAGGCTCGAAGAGTGTCCGATCATCAAATCGCTGGCACTTTCGTTCTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CAA 90 bp GGGACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGTGATGTCAGGCCGTGGGTaGGTCTGCCGAGGGTATCCC +
Preference number: 5 (lower is better)
Translates to: GTVFLFLWLPYHNRGSLVMSGRG*VCRGYP
Trigger: GGGATACCCTCGGCAGACCAACCCACGGCCTGACAT...CACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR CAA 90 bp CAACAAAGCTCAGGAATAACTCCCTCTGTTGATGAAAGTGTCCTCTCCCGGGTTGAAAGTGCCAGCGATTaGATGATCGGACACTCTTCG +
Preference number: 5 (lower is better)
Translates to: QQSSGITPSVDESVLSRVESASD*MIGHSS
Trigger: CGAAGAGTGTCCGATCATCAAATCGCTGGCACTTTC...AACCCGGGAGAGGACACTTTCATCAACAGAGGGAGTTATTCCTGAGCTTTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CAA 90 bp AGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGCTCTGTTTAGAGGCCTTCGTCTaGTCCTGTTCACCCCCATCT +
Preference number: 5 (lower is better)
Translates to: RGTMSPCLHQLFSLSLLCLEAFV*SCSPPS
Trigger: AGATGGGGGTGAACAGGACAAGACGAAGGCCTCTAA...ACAGAGCAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CAA 90 bp ATCAGCCTCTTGAAAACAAGTCATCAGTTTGGAATGAGGAGGAATGAGAACGAAACAGTCTCACCACTGTaGCTCCTGGCAACAGCATCC +
Preference number: 5 (lower is better)
Translates to: ISLLKTSHQFGMRRNENETVSPL*LLATAS
Trigger: GGATGCTGTTGCCAGGAGCAACAGTGGTGAGACTGT...TTCGTTCTCATTCCTCCTCATTCCAAACTGATGACTTGTTTTCAAGAGGCTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CAA 90 bp CTTAGTGGCCACAGGGGTCTAGTTAATGAGCGGGTTATACAATATTCATTGTGTGAAAGTGCCAGCGATTaGATGATCGGACACTCTTCG +
Preference number: 5 (lower is better)
Translates to: LSGHRGLVNERVIQYSLCESASD*MIGHSS
Trigger: CGAAGAGTGTCCGATCATCAAATCGCTGGCACTTTC...ACACAATGAATATTGTATAACCCGCTCATTAACTAGACCCCTGTGGCCACTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CAA 90 bp CAACAAAGCTCAGGAATAACTCCCTCTGTTGATGAAAGTGTCCTCTCCCGGGTTGACTGCATCAGCCTCTaGAAAACAAGTCATCAGTTT +
Preference number: 5 (lower is better)
Translates to: QQSSGITPSVDESVLSRVDCISL*KTSHQF
Trigger: AAACTGATGACTTGTTTTCAAGAGGCTGATGCAGTC...AACCCGGGAGAGGACACTTTCATCAACAGAGGGAGTTATTCCTGAGCTTTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS CCA 90 bp AAGACCCTGTCTCTAGGAACACAGTTTTCTTCAGGCTTGATAGAATaGCTTCCTCCCGCAGAGTTGCAAACACATCCCTTAAACATAAGT +
Preference number: 5 (lower is better)
Translates to: KTLSLGTQFSSGLIE*LPPAELQTHPLNIS
Trigger: ACTTATGTTTAAGGGATGTGTTTGCAACTCTGCGGGAGGAAGCCATTCTATCAAGCCTGAAGAAAACTGTGTTCCTAGAGACAGGGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS CCA 90 bp TGCATCCTCATCCTAGGAACACAGTTTTCTTCAGGCTTGATAGAATaGCTTCCTCCCGCAGAGTTGCAAACACATCCCTTAAACATAAGT +
Preference number: 5 (lower is better)
Translates to: CILILGTQFSSGLIE*LPPAELQTHPLNIS
Trigger: ACTTATGTTTAAGGGATGTGTTTGCAACTCTGCGGGAGGAAGCCATTCTATCAAGCCTGAAGAAAACTGTGTTCCTAGGATGAGGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR CAA 90 bp GGAGGGACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTACTTCCTCCCGCAGAGTaGCAAACACATCCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: GGTVFLFLWLPYHNRGSLLPPAE*QTHPLN
Trigger: GTTTAAGGGATGTGTTTGCAACTCTGCGGGAGGAAG...TAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGTCCCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR CAA 90 bp ATCAGCCTCTTGAAAACAAGTCATCAGTTTGGAATGAGGAGGAATGAGAACGAACTTCCTCCCGCAGAGTaGCAAACACATCCCTTAAAC +
Preference number: 5 (lower is better)
Translates to: ISLLKTSHQFGMRRNENELPPAE*QTHPLN
Trigger: GTTTAAGGGATGTGTTTGCAACTCTGCGGGAGGAAG...TTCGTTCTCATTCCTCCTCATTCCAAACTGATGACTTGTTTTCAAGAGGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS-3UTR CAA 90 bp ATTGACAGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGTTTCTCTTCAGGGACTaGTCAGAGTGGGTGACTGCA +
Preference number: 5 (lower is better)
Translates to: IDRGTMSPCLHQLFSLSLFLFRD*SEWVTA
Trigger: TGCAGTCACCCACTCTGACAAGTCCCTGAAGAGAAA...CAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCTGTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS-3UTR CAA 90 bp ACAGTATTTTTATTTCTATGGCTTCCTTACCACAACAGAGGAAGCTTAGTGGCCGACTGCATCAGCCTCTaGAAAACAAGTCATCAGTTT +
Preference number: 5 (lower is better)
Translates to: TVFLFLWLPYHNRGSLVADCISL*KTSHQF
Trigger: AAACTGATGACTTGTTTTCAAGAGGCTGATGCAGTC...GGCCACTAAGCTTCCTCTGTTGTGGTAAGGAAGCCATAGAAATAAAAATACTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636502.1
CDS-3UTR CAA 90 bp ATTGACAGAGGCACAATGAGTCCCTGTCTTCATCAGTTATTCTCATTATCTCTGCAGATGATTCAATCCTaGCCCAGTAAACAAAATATG +
Preference number: 5 (lower is better)
Translates to: IDRGTMSPCLHQLFSLSLQMIQS*PSKQNM
Trigger: CATATTTTGTTTACTGGGCAAGGATTGAATCATCTG...CAGAGATAATGAGAATAACTGATGAAGACAGGGACTCATTGTGCCTCTGTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636502.1
ENST00000636686.1
CDS CCA 72 bp TCTCTAGGAACACAGTTTTCTTCAGGCTTGATAGAATaGCTTCCTCCCGCAGAGTTGCAAACACATCCCTTA +
Preference number: 6 (lower is better)
Translates to: SLGTQFSSGLIE*LPPAELQTHPL
Trigger: TAAGGGATGTGTTTGCAACTCTGCGGGAGGAAGCCATTCTATCAAGCCTGAAGAAAACTGTGTTCCTAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636686.1
CDS CCA 72 bp ATCCTAGGAACACAGTTTTCTTCAGGCTTGATAGAATaGCTTCCTCCCGCAGAGTTGCAAACACATCCCTTA +
Preference number: 6 (lower is better)
Translates to: ILGTQFSSGLIE*LPPAELQTHPL
Trigger: TAAGGGATGTGTTTGCAACTCTGCGGGAGGAAGCCATTCTATCAAGCCTGAAGAAAACTGTGTTCCTAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636502.1