RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RECQL4 (Homo sapiens)

Ensembl gene IDs: ENSG00000160957

Ensembl transcript IDs: ENST00000301323.7, ENST00000524998.1, ENST00000529424.2, ENST00000531875.2, ENST00000532846.2, ENST00000534270.1, ENST00000534538.1, ENST00000534626.6, ENST00000617875.6, ENST00000621189.4

Found 587 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGGCTCTGGCGCCTCTTCGGCCGCCGCGGGGAGCGACTCGGAGCTaGGGAGCCCGCCGCCGGCCTGGCCCGTGGTACGCTTCAGAGTGC +
Preference number: 1 (lower is better)
Translates to: GALAPLRPPRGATRS*GARRRPGPWYASEC
Trigger: GCACTCTGAAGCGTACCACGGGCCAGGCCGGCGGCGGGCTCCGCAGCTCCGAGTCGCTCCCCGCGGCGGCCGAAGAGGCGCCAGAGCCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR GCA 90 bp AGCTGCGGAGCCCGCCGCCGGCCTGGCCCGTGGTACGCTTCAGAGTaGGGTATTCCCGGTAGAGCGCTGCGTGGGCGAGCGGGAGGCGGG +
Preference number: 1 (lower is better)
Translates to: SCGARRRPGPWYASE*GIPGRALRGRAGGG
Trigger: CCCGCCTCCCGCTCGCCCACGCAGCGCTCTACCGGGAATACCGCACTCTGAAGCGTACCACGGGCCAGGCCGGCGGCGGGCTCCGCAGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR CCA 90 bp CGGGGAGCGACTCGGAGCTGCGGAGCCCGCCGCCGGCCTGGCCCGTaGTACGCTTCAGAGTGCGGTATTCCCGGTAGAGCGCTGCGTGGG +
Preference number: 1 (lower is better)
Translates to: RGATRSCGARRRPGP*YASECGIPGRALRG
Trigger: CCCACGCAGCGCTCTACCGGGAATACCGCACTCTGAAGCGTACCACGGGCCAGGCCGGCGGCGGGCTCCGCAGCTCCGAGTCGCTCCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR CCA 90 bp CGCCCTGGCGTAGACTGTGGACTCTTGGTCGCAGCCCGATTCAGATaGGGCCCCCAGCAGCGGGGCTCTGGCGCCTCTTCGGCCGCCGCG +
Preference number: 1 (lower is better)
Translates to: RPGVDCGLLVAARFR*GPQQRGSGASSAAA
Trigger: CGCGGCGGCCGAAGAGGCGCCAGAGCCCCGCTGCTGGGGGCCCCATCTGAATCGGGCTGCGACCAAGAGTCCACAGTCTACGCCAGGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR CCA 90 bp GTAGTCCGGCACCGAGCCCTGGCGGCTCCGCCCTGGCGTAGACTGTaGACTCTTGGTCGCAGCCCGATTCAGATGGGGCCCCCAGCAGCG +
Preference number: 1 (lower is better)
Translates to: VVRHRALAAPPWRRL*TLGRSPIQMGPPAA
Trigger: CGCTGCTGGGGGCCCCATCTGAATCGGGCTGCGACCAAGAGTCCACAGTCTACGCCAGGGCGGAGCCGCCAGGGCTCGGTGCCGGACTAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR CCA 90 bp GAGCCGCTGCCCGTAGTCCGGCACCGAGCCCTGGCGGCTCCGCCCTaGCGTAGACTGTGGACTCTTGGTCGCAGCCCGATTCAGATGGGG +
Preference number: 1 (lower is better)
Translates to: EPLPVVRHRALAAPP*RRLWTLGRSPIQMG
Trigger: CCCCATCTGAATCGGGCTGCGACCAAGAGTCCACAGTCTACGCCAGGGCGGAGCCGCCAGGGCTCGGTGCCGGACTACGGGCAGCGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR GCA 90 bp CCTGGAGTCTGGCCTGCCCTGGCTCGGGGCCCTGTGCGTCCTCCATaGCTCCCGGCTCCTGCCCTTCCTCTTCCTCAAAGTAGCGGCCGA +
Preference number: 1 (lower is better)
Translates to: PGVWPALARGPVRPP*LPAPALPLPQSSGR
Trigger: TCGGCCGCTACTTTGAGGAAGAGGAAGGGCAGGAGCCGGGAGGCATGGAGGACGCACAGGGCCCCGAGCCAGGGCAGGCCAGACTCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR GCA 90 bp AACCAGCCAGGATCTAGGGAGCCCAGCCGCTGGCTCAGGGATGCCTaGAGATGCTGGAGCCGGCCTGGCCTTGGCTGGGGCTCAGGGAGC +
Preference number: 1 (lower is better)
Translates to: NQPGSREPSRWLRDA*RCWSRPGLGWGSGS
Trigger: GCTCCCTGAGCCCCAGCCAAGGCCAGGCCGGCTCCAGCATCTGCAGGCATCCCTGAGCCAGCGGCTGGGCTCCCTAGATCCTGGCTGGTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR TCA 90 bp TCTCGCCTCCACTGCTGCTGGGCTGGGGGCTCCCCACACGGATGCTaGCTTCTTGGAAGGCTGAAGCCTCTGGGCCCTGGGAGCCAGCAC +
Preference number: 1 (lower is better)
Translates to: SRLHCCWAGGSPHGC*LLGRLKPLGPGSQH
Trigger: GTGCTGGCTCCCAGGGCCCAGAGGCTTCAGCCTTCCAAGAAGTCAGCATCCGTGTGGGGAGCCCCCAGCCCAGCAGCAGTGGAGGCGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR GCA 90 bp AGCTCTACCCGACATCCCCCAATGCAGTGCAGTCAGCGGGCCACCTaGAGGAGCTCTTCCGTGGCCAGGCCCACCAGGGCATGGAAGCTC +
Preference number: 1 (lower is better)
Translates to: SSTRHPPMQCSQRAT*RSSSVARPTRAWKL
Trigger: GAGCTTCCATGCCCTGGTGGGCCTGGCCACGGAAGAGCTCCTGCAGGTGGCCCGCTGACTGCACTGCATTGGGGGATGTCGGGTAGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR GCA 90 bp CTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTaGAGTCAGCGGGCCACCTGCAGGAGCTCTTCCGTGGCCAGGCCC +
Preference number: 1 (lower is better)
Translates to: LASDNPSSTRHPPMQ*SQRATCRSSSVARP
Trigger: GGGCCTGGCCACGGAAGAGCTCCTGCAGGTGGCCCGCTGACTGCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR TCA 90 bp GGCTCATCACTGACTTTTTCTGCAGGGTGCCTTTCAGATTGGCCTTaGGCCGCTGCCCGTAGTCCGGCACCGAGCCCTGGCGGCTCCGCC +
Preference number: 1 (lower is better)
Translates to: GSSLTFSAGCLSDWP*AAARSPAPSPGGSA
Trigger: GGCGGAGCCGCCAGGGCTCGGTGCCGGACTACGGGCAGCGGCTCAAGGCCAATCTGAAAGGCACCCTGCAGAAAAAGTCAGTGATGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR CCA 90 bp CGGGCCACCTGCAGGAGCTCTTCCGTGGCCAGGCCCACCAGGGCATaGAAGCTCAGGTGCAGGTATTTTCTCCAGAAGCGTCGGTCCTGC +
Preference number: 1 (lower is better)
Translates to: RATCRSSSVARPTRA*KLRCRYFLQKRRSC
Trigger: GCAGGACCGACGCTTCTGGAGAAAATACCTGCACCTGAGCTTCCATGCCCTGGTGGGCCTGGCCACGGAAGAGCTCCTGCAGGTGGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR CCA 90 bp AGCAGGGGCTTCCGATGCCGTGGAAGATGCGGGCCACAGCCCTGCTaGAGAACTTCTCCTCTGGCCTCAGGGACAGGAACTGGCGGATGT +
Preference number: 1 (lower is better)
Translates to: SRGFRCRGRCGPQPC*RTSPLASGTGTGGC
Trigger: ACATCCGCCAGTTCCTGTCCCTGAGGCCAGAGGAGAAGTTCTCCAGCAGGGCTGTGGCCCGCATCTTCCACGGCATCGGAAGCCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR CCA 90 bp CCCCAATGCAGTGCAGTCAGCGGGCCACCTGCAGGAGCTCTTCCGTaGCCAGGCCCACCAGGGCATGGAAGCTCAGGTGCAGGTATTTTC +
Preference number: 1 (lower is better)
Translates to: PQCSAVSGPPAGALP*PGPPGHGSSGAGIF
Trigger: GAAAATACCTGCACCTGAGCTTCCATGCCCTGGTGGGCCTGGCCACGGAAGAGCTCCTGCAGGTGGCCCGCTGACTGCACTGCATTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR GCA 90 bp AGGAGCTCTTCCGTGGCCAGGCCCACCAGGGCATGGAAGCTCAGGTaGAGGTATTTTCTCCAGAAGCGTCGGTCCTGCCCGTACACCTGG +
Preference number: 1 (lower is better)
Translates to: RSSSVARPTRAWKLR*RYFLQKRRSCPYTW
Trigger: CCAGGTGTACGGGCAGGACCGACGCTTCTGGAGAAAATACCTGCACCTGAGCTTCCATGCCCTGGTGGGCCTGGCCACGGAAGAGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR CCA 90 bp CAGATGCTGGAGCCGGCCTGGCCTTGGCTGGGGCTCAGGGAGCTGTaGAGGCTCATCACTGACTTTTTCTGCAGGGTGCCTTTCAGATTG +
Preference number: 1 (lower is better)
Translates to: QMLEPAWPWLGLREL*RLITDFFCRVPFRL
Trigger: CAATCTGAAAGGCACCCTGCAGAAAAAGTCAGTGATGAGCCTCCACAGCTCCCTGAGCCCCAGCCAAGGCCAGGCCGGCTCCAGCATCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR-3UTR CCA 90 bp GTGCAGTCAGCGGGCCACCTGCAGGAGCTCTTCCGTGGCCAGGCCCACCAGGGCGGCAGGGCCCGCAGCTaGGGAAGGCTACGCTGTGAA +
Preference number: 2 (lower is better)
Translates to: VQSAGHLQELFRGQAHQGGRARS*GRLRCE
Trigger: TTCACAGCGTAGCCTTCCCCAGCTGCGGGCCCTGCC...GCCCTGGTGGGCCTGGCCACGGAAGAGCTCCTGCAGGTGGCCCGCTGACTGCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR-3UTR CCA 90 bp GTCCTGCCCGTACACCTGGGCCGGGTAGCAGGGGCTTCCGATGCCGTGGAAGATGAGTCTGGCCTGCCCTaGCTCGGGGCCCTGTGCGTC +
Preference number: 2 (lower is better)
Translates to: VLPVHLGRVAGASDAVEDESGLP*LGALCV
Trigger: GACGCACAGGGCCCCGAGCCAGGGCAGGCCAGACTC...ATCTTCCACGGCATCGGAAGCCCCTGCTACCCGGCCCAGGTGTACGGGCAGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR-3UTR GCA 90 bp CAATGCAGTGCAGTCAGCGGGCCACCTGCAGGAGCTCTTCCGTGGCCAGGCCCACTGCGCTCCTCATCCTaGTGCTCCAGGCAGGGCCCG +
Preference number: 2 (lower is better)
Translates to: QCSAVSGPPAGALPWPGPLRSSS*CSRQGP
Trigger: CGGGCCCTGCCTGGAGCAGCAGGATGAGGAGCGCAG...TGGGCCTGGCCACGGAAGAGCTCCTGCAGGTGGCCCGCTGACTGCACTGCATTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR-3UTR GCA 90 bp CAATGCAGTGCAGTCAGCGGGCCACCTGCAGGAGCTCTTCCGTGGCCAGGCCCACAGAAGCGTCGGTCCTaGCCGTACACCTGGGCCGGG +
Preference number: 2 (lower is better)
Translates to: QCSAVSGPPAGALPWPGPQKRRS*PYTWAG
Trigger: CCCGGCCCAGGTGTACGGGCAGGACCGACGCTTCTG...TGGGCCTGGCCACGGAAGAGCTCCTGCAGGTGGCCCGCTGACTGCACTGCATTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR-3UTR CCA 90 bp GCGGGCCACCTGCAGGAGCTCTTCCGTGGCCAGGCCCACCAGGGCATGGAAGCTGGGCCACAGCCCTGCTaGAGAACTTCTCCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: AGHLQELFRGQAHQGMEAGPQPC*RTSPLA
Trigger: GGCCAGAGGAGAAGTTCTCCAGCAGGGCTGTGGCCC...AGCTTCCATGCCCTGGTGGGCCTGGCCACGGAAGAGCTCCTGCAGGTGGCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR-3UTR GCA 90 bp CAATGCAGTGCAGTCAGCGGGCCACCTGCAGGAGCTCTTCCGTGGCCAGGCCCACCTGTGCGTCCTCCATaGCTCCCGGCTCCTGCCCTT +
Preference number: 2 (lower is better)
Translates to: QCSAVSGPPAGALPWPGPPVRPP*LPAPAL
Trigger: AAGGGCAGGAGCCGGGAGGCATGGAGGACGCACAGG...TGGGCCTGGCCACGGAAGAGCTCCTGCAGGTGGCCCGCTGACTGCACTGCATTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR-3UTR CCA 90 bp TGGGGGCTCCCCACACGGATGCTGACTTCTTGGAAGGCTGAAGCCTCTGGGCCCCGCCGGCCTGGCCCGTaGTACGCTTCAGAGTGCGGT +
Preference number: 2 (lower is better)
Translates to: WGLPTRMLTSWKAEASGPRRPGP*YASECG
Trigger: ACCGCACTCTGAAGCGTACCACGGGCCAGGCCGGCG...GGGCCCAGAGGCTTCAGCCTTCCAAGAAGTCAGCATCCGTGTGGGGAGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR-3UTR GCA 90 bp GGACAGGAACTGGCGGATGTCGCAGCGGACCTGGTCCTCCCAATCCTGGAGTCTCGCTCCTCATCCTGCTaGTCCAGGCAGGGCCCGCAG +
Preference number: 2 (lower is better)
Translates to: GQELADVAADLVLPILESRSSSC*SRQGPQ
Trigger: CTGCGGGCCCTGCCTGGAGCAGCAGGATGAGGAGCG...AGACTCCAGGATTGGGAGGACCAGGTCCGCTGCGACATCCGCCAGTTCCTGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR-3UTR GCA 90 bp GCTCTTCCGTGGCCAGGCCCACCAGGGCATGGAAGCTCAGGTGCAGGTATTTTCTGGCTCGGGGCCCTGTaGGTCCTCCATGCCTCCCGG +
Preference number: 2 (lower is better)
Translates to: ALPWPGPPGHGSSGAGIFWLGAL*VLHASR
Trigger: CCGGGAGGCATGGAGGACGCACAGGGCCCCGAGCCA...GAAAATACCTGCACCTGAGCTTCCATGCCCTGGTGGGCCTGGCCACGGAAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR-3UTR CCA 90 bp GGACCTCACTGTGACATCGCTGTAACCAGCCAGGATCTAGGGAGCCCAGCCGCTAGCCCGCCGCCGGCCTaGCCCGTGGTACGCTTCAGA +
Preference number: 2 (lower is better)
Translates to: GPHCDIAVTSQDLGSPAASPPPA*PVVRFR
Trigger: TCTGAAGCGTACCACGGGCCAGGCCGGCGGCGGGCT...AGCGGCTGGGCTCCCTAGATCCTGGCTGGTTACAGCGATGTCACAGTGAGGTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR-3UTR TCA 90 bp GTGCAGGTATTTTCTCCAGAAGCGTCGGTCCTGCCCGTACACCTGGGCCGGGTAGGCCGAGCAGGTCCTTaGGCCTGGTGCTGCGCTCCT +
Preference number: 2 (lower is better)
Translates to: VQVFSPEASVLPVHLGRVGRAGP*AWCCAP
Trigger: AGGAGCGCAGCACCAGGCTCAAGGACCTGCTCGGCC...TACCCGGCCCAGGTGTACGGGCAGGACCGACGCTTCTGGAGAAAATACCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR-3UTR GCA 90 bp GTGCAGGTATTTTCTCCAGAAGCGTCGGTCCTGCCCGTACACCTGGGCCGGGTATCCTGGAGTCTGGCCTaGCCTGGCTCGGGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: VQVFSPEASVLPVHLGRVSWSLA*PGSGPC
Trigger: ACAGGGCCCCGAGCCAGGGCAGGCCAGACTCCAGGA...TACCCGGCCCAGGTGTACGGGCAGGACCGACGCTTCTGGAGAAAATACCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR-3UTR GCA 90 bp TGGGAGCCAGCACCAGGACCAAGGACAGCCGACTCACCAGGGATCAGAAGTTGTTTCCCGGTAGAGCGCTaGGTGGGCGAGCGGGAGGCG +
Preference number: 2 (lower is better)
Translates to: WEPAPGPRTADSPGIRSCFPVER*VGEREA
Trigger: CGCCTCCCGCTCGCCCACGCAGCGCTCTACCGGGAA...ACAACTTCTGATCCCTGGTGAGTCGGCTGTCCTTGGTCCTGGTGCTGGCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR-3UTR TCA 90 bp AGCTCTACCCGACATCCCCCAATGCAGTGCAGTCAGCGGGCCACCTGCAGGAGCGGGAAGGCTACGCTGTaGAAGGCCTGGAAGGTTCTG +
Preference number: 2 (lower is better)
Translates to: SSTRHPPMQCSQRATCRSGKATL*KAWKVL
Trigger: CAGAACCTTCCAGGCCTTTCACAGCGTAGCCTTCCC...GCTCCTGCAGGTGGCCCGCTGACTGCACTGCATTGGGGGATGTCGGGTAGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR-3UTR CCA 90 bp CTGGGAGCCAGCACCAGGACCAAGGACAGCCGACTCACCAGGGATCAGAAGTTGCTGGCGGCTCCGCCCTaGCGTAGACTGTGGACTCTT +
Preference number: 2 (lower is better)
Translates to: LGASTRTKDSRLTRDQKLLAAPP*RRLWTL
Trigger: AAGAGTCCACAGTCTACGCCAGGGCGGAGCCGCCAG...CAACTTCTGATCCCTGGTGAGTCGGCTGTCCTTGGTCCTGGTGCTGGCTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR-3UTR CCA 90 bp AGGGCATGGAAGCTCAGGTGCAGGTATTTTCTCCAGAAGCGTCGGTCCTGCCCGCTCAGGGACAGGAACTaGCGGATGTCGCAGCGGACC +
Preference number: 2 (lower is better)
Translates to: RAWKLRCRYFLQKRRSCPLRDRN*RMSQRT
Trigger: GGTCCGCTGCGACATCCGCCAGTTCCTGTCCCTGAG...CGGGCAGGACCGACGCTTCTGGAGAAAATACCTGCACCTGAGCTTCCATGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR-3UTR CCA 90 bp GGCCCTGGGAGCCAGCACCAGGACCAAGGACAGCCGACTCACCAGGGATCAGAAGGGCTCAGGGAGCTGTaGAGGCTCATCACTGACTTT +
Preference number: 2 (lower is better)
Translates to: GPGSQHQDQGQPTHQGSEGLREL*RLITDF
Trigger: AAAGTCAGTGATGAGCCTCCACAGCTCCCTGAGCCC...TTCTGATCCCTGGTGAGTCGGCTGTCCTTGGTCCTGGTGCTGGCTCCCAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR-3UTR GCA 90 bp TGGGAGCCAGCACCAGGACCAAGGACAGCCGACTCACCAGGGATCAGAAGTTGTTGGTACGCTTCAGAGTaGGGTATTCCCGGTAGAGCG +
Preference number: 2 (lower is better)
Translates to: WEPAPGPRTADSPGIRSCWYASE*GIPGRA
Trigger: CGCTCTACCGGGAATACCGCACTCTGAAGCGTACCA...ACAACTTCTGATCCCTGGTGAGTCGGCTGTCCTTGGTCCTGGTGCTGGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR-3UTR GCA 90 bp CAAGGACAGCCGACTCACCAGGGATCAGAAGTTGTGATTCCTCTGAGCCTAGATCCGCTGGCTCAGGGATaGCTGCAGATGCTGGAGCCG +
Preference number: 2 (lower is better)
Translates to: QGQPTHQGSEVVIPLSLDPLAQG*LQMLEP
Trigger: CGGCTCCAGCATCTGCAGGCATCCCTGAGCCAGCGG...ATCTAGGCTCAGAGGAATCACAACTTCTGATCCCTGGTGAGTCGGCTGTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR-3UTR CCA 90 bp CAAGGACAGCCGACTCACCAGGGATCAGAAGTTGTGATTCCTCTGAGCCTAGATGGCCCCCAGAAAATCTaGGACCTCACTGTGACATCG +
Preference number: 2 (lower is better)
Translates to: QGQPTHQGSEVVIPLSLDGPQKI*DLTVTS
Trigger: CGATGTCACAGTGAGGTCCCAGATTTTCTGGGGGCC...ATCTAGGCTCAGAGGAATCACAACTTCTGATCCCTGGTGAGTCGGCTGTCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR GCA 72 bp GCCCGCCGCCGGCCTGGCCCGTGGTACGCTTCAGAGTaGGGTATTCCCGGTAGAGCGCTGCGTGGGCGAGCG +
Preference number: 3 (lower is better)
Translates to: ARRRPGPWYASE*GIPGRALRGRA
Trigger: CGCTCGCCCACGCAGCGCTCTACCGGGAATACCGCACTCTGAAGCGTACCACGGGCCAGGCCGGCGGCGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR CCA 72 bp GGGAGCGACTCGGAGCTGCGGAGCCCGCCGCCGGCCTaGCCCGTGGTACGCTTCAGAGTGCGGTATTCCCGG +
Preference number: 3 (lower is better)
Translates to: GSDSELRSPPPA*PVVRFRVRYSR
Trigger: CCGGGAATACCGCACTCTGAAGCGTACCACGGGCCAGGCCGGCGGCGGGCTCCGCAGCTCCGAGTCGCTCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR CCA 72 bp ACTCGGAGCTGCGGAGCCCGCCGCCGGCCTGGCCCGTaGTACGCTTCAGAGTGCGGTATTCCCGGTAGAGCG +
Preference number: 3 (lower is better)
Translates to: TRSCGARRRPGP*YASECGIPGRA
Trigger: CGCTCTACCGGGAATACCGCACTCTGAAGCGTACCACGGGCCAGGCCGGCGGCGGGCTCCGCAGCTCCGAGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR CCA 72 bp CACCGAGCCCTGGCGGCTCCGCCCTGGCGTAGACTGTaGACTCTTGGTCGCAGCCCGATTCAGATGGGGCCC +
Preference number: 3 (lower is better)
Translates to: HRALAAPPWRRL*TLGRSPIQMGP
Trigger: GGGCCCCATCTGAATCGGGCTGCGACCAAGAGTCCACAGTCTACGCCAGGGCGGAGCCGCCAGGGCTCGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR CCA 72 bp CCCGTAGTCCGGCACCGAGCCCTGGCGGCTCCGCCCTaGCGTAGACTGTGGACTCTTGGTCGCAGCCCGATT +
Preference number: 3 (lower is better)
Translates to: PVVRHRALAAPP*RRLWTLGRSPI
Trigger: AATCGGGCTGCGACCAAGAGTCCACAGTCTACGCCAGGGCGGAGCCGCCAGGGCTCGGTGCCGGACTACGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR CCA 72 bp CCCTCCGATGGGGGTCCAGCTTGGCTGCTCTCCTGCTaGACCTGTGCGGGGCTCTCCCAGGGCTCCTCGTTC +
Preference number: 3 (lower is better)
Translates to: PSDGGPAWLLSC*TCAGLSQGSSF
Trigger: GAACGAGGAGCCCTGGGAGAGCCCCGCACAGGTCCAGCAGGAGAGCAGCCAAGCTGGACCCCCATCGGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR GCA 72 bp TGGCCTGCCCTGGCTCGGGGCCCTGTGCGTCCTCCATaGCTCCCGGCTCCTGCCCTTCCTCTTCCTCAAAGT +
Preference number: 3 (lower is better)
Translates to: WPALARGPVRPP*LPAPALPLPQS
Trigger: ACTTTGAGGAAGAGGAAGGGCAGGAGCCGGGAGGCATGGAGGACGCACAGGGCCCCGAGCCAGGGCAGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR GCA 72 bp CGACATCCCCCAATGCAGTGCAGTCAGCGGGCCACCTaGAGGAGCTCTTCCGTGGCCAGGCCCACCAGGGCA +
Preference number: 3 (lower is better)
Translates to: RHPPMQCSQRAT*RSSSVARPTRA
Trigger: TGCCCTGGTGGGCCTGGCCACGGAAGAGCTCCTGCAGGTGGCCCGCTGACTGCACTGCATTGGGGGATGTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR GCA 72 bp GGGCCGGGTAGCAGGGGCTTCCGATGCCGTGGAAGATaGGGGCCACAGCCCTGCTGGAGAACTTCTCCTCTG +
Preference number: 3 (lower is better)
Translates to: GPGSRGFRCRGR*GPQPCWRTSPL
Trigger: CAGAGGAGAAGTTCTCCAGCAGGGCTGTGGCCCGCATCTTCCACGGCATCGGAAGCCCCTGCTACCCGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR CCA 72 bp AGTGCAGTCAGCGGGCCACCTGCAGGAGCTCTTCCGTaGCCAGGCCCACCAGGGCATGGAAGCTCAGGTGCA +
Preference number: 3 (lower is better)
Translates to: SAVSGPPAGALP*PGPPGHGSSGA
Trigger: TGCACCTGAGCTTCCATGCCCTGGTGGGCCTGGCCACGGAAGAGCTCCTGCAGGTGGCCCGCTGACTGCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR CCA 72 bp GTAGACTGTGGACTCTTGGTCGCAGCCCGATTCAGATaGGGCCCCCAGCAGCGGGGCTCTGGCGCCTCTTCG +
Preference number: 3 (lower is better)
Translates to: VDCGLLVAARFR*GPQQRGSGASS
Trigger: CGAAGAGGCGCCAGAGCCCCGCTGCTGGGGGCCCCATCTGAATCGGGCTGCGACCAAGAGTCCACAGTCTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR CCA 72 bp CGCTGTAACCAGCCAGGATCTAGGGAGCCCAGCCGCTaGCTCAGGGATGCCTGCAGATGCTGGAGCCGGCCT +
Preference number: 3 (lower is better)
Translates to: RCNQPGSREPSR*LRDACRCWSRP
Trigger: AGGCCGGCTCCAGCATCTGCAGGCATCCCTGAGCCAGCGGCTGGGCTCCCTAGATCCTGGCTGGTTACAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR GCA 72 bp TCCGTGGCCAGGCCCACCAGGGCATGGAAGCTCAGGTaGAGGTATTTTCTCCAGAAGCGTCGGTCCTGCCCG +
Preference number: 3 (lower is better)
Translates to: SVARPTRAWKLR*RYFLQKRRSCP
Trigger: CGGGCAGGACCGACGCTTCTGGAGAAAATACCTGCACCTGAGCTTCCATGCCCTGGTGGGCCTGGCCACGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR GCA 72 bp GACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTaGAGTCAGCGGGCCACCTGCAGGAGCTCTTCCGTG +
Preference number: 3 (lower is better)
Translates to: DNPSSTRHPPMQ*SQRATCRSSSV
Trigger: CACGGAAGAGCTCCTGCAGGTGGCCCGCTGACTGCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR TCA 72 bp CTGACTTTTTCTGCAGGGTGCCTTTCAGATTGGCCTTaGGCCGCTGCCCGTAGTCCGGCACCGAGCCCTGGC +
Preference number: 3 (lower is better)
Translates to: LTFSAGCLSDWP*AAARSPAPSPG
Trigger: GCCAGGGCTCGGTGCCGGACTACGGGCAGCGGCTCAAGGCCAATCTGAAAGGCACCCTGCAGAAAAAGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR GCA 72 bp CCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATaGAGTGCAGTCAGCGGGCCACCTGCAGGAGCTCTT +
Preference number: 3 (lower is better)
Translates to: PLTTPALPDIPQ*SAVSGPPAGAL
Trigger: AAGAGCTCCTGCAGGTGGCCCGCTGACTGCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR TCA 72 bp CTTCCTCTTCCTCAAAGTAGCGGCCGAGCAGGTCCTTaGGCCTGGTGCTGCGCTCCTCATCCTGCTGCTCCA +
Preference number: 3 (lower is better)
Translates to: LPLPQSSGRAGP*AWCCAPHPAAP
Trigger: TGGAGCAGCAGGATGAGGAGCGCAGCACCAGGCTCAAGGACCTGCTCGGCCGCTACTTTGAGGAAGAGGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301323.7
3UTR CCA 72 bp TGCAGGAGCTCTTCCGTGGCCAGGCCCACCAGGGCATaGAAGCTCAGGTGCAGGTATTTTCTCCAGAAGCGT +
Preference number: 3 (lower is better)
Translates to: CRSSSVARPTRA*KLRCRYFLQKR
Trigger: ACGCTTCTGGAGAAAATACCTGCACCTGAGCTTCCATGCCCTGGTGGGCCTGGCCACGGAAGAGCTCCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS-3UTR GCA 90 bp CGGGGAGCGACTCGGAGCTGCGGAGCCCGCCGCCGGCCTGGCCCGTGGTACGCTTTCCCGGTAGAGCGCTaGGTGGGCGAGCGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: RGATRSCGARRRPGPWYAFPVER*VGEREA
Trigger: CGCCTCCCGCTCGCCCACGCAGCGCTCTACCGGGAA...AGCGTACCACGGGCCAGGCCGGCGGCGGGCTCCGCAGCTCCGAGTCGCTCCCCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR GCA 90 bp GGCCTGCCCTGGCTCGGGGCCCTGTGCGTCCTCCATGCCTCCCGGCTCCTGCCCTCCTGGAGTCTGGCCTaGCCTGGCTCGGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GLPWLGALCVLHASRLLPSWSLA*PGSGPC
Trigger: ACAGGGCCCCGAGCCAGGGCAGGCCAGACTCCAGGA...GGGCAGGAGCCGGGAGGCATGGAGGACGCACAGGGCCCCGAGCCAGGGCAGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS-3UTR CCA 90 bp ATTGGCCTTGAGCCGCTGCCCGTAGTCCGGCACCGAGCCCTGGCGGCTCCGCCCTCCGGCACCGAGCCCTaGCGGCTCCGCCCTGGCGTA +
Preference number: 4 (lower is better)
Translates to: IGLEPLPVVRHRALAAPPSGTEP*RLRPGV
Trigger: TACGCCAGGGCGGAGCCGCCAGGGCTCGGTGCCGGA...GGGCGGAGCCGCCAGGGCTCGGTGCCGGACTACGGGCAGCGGCTCAAGGCCAAT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR TCA 90 bp CTGGCCTGCCCTGGCTCGGGGCCCTGTGCGTCCTCCATGCCTCCCGGCTCCTGCGGCCGAGCAGGTCCTTaGGCCTGGTGCTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: LACPGSGPCASSMPPGSCGRAGP*AWCCAP
Trigger: AGGAGCGCAGCACCAGGCTCAAGGACCTGCTCGGCC...GCAGGAGCCGGGAGGCATGGAGGACGCACAGGGCCCCGAGCCAGGGCAGGCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS-3UTR GCA 90 bp CGGGGAGCGACTCGGAGCTGCGGAGCCCGCCGCCGGCCTGGCCCGTGGTACGCTAGCCTAGATCAGGCCTaGAGGCTTTGGGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RGATRSCGARRRPGPWYASLDQA*RLWGPP
Trigger: TGGGGGCCCCCAAAGCCTGCAGGCCTGATCTAGGCT...AGCGTACCACGGGCCAGGCCGGCGGCGGGCTCCGCAGCTCCGAGTCGCTCCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR GCA 90 bp GCGGGCCACCTGCAGGAGCTCTTCCGTGGCCAGGCCCACCAGGGCATGGAAGCTTGGCTCGGGGCCCTGTaGGTCCTCCATGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: AGHLQELFRGQAHQGMEAWLGAL*VLHASR
Trigger: CCGGGAGGCATGGAGGACGCACAGGGCCCCGAGCCA...AGCTTCCATGCCCTGGTGGGCCTGGCCACGGAAGAGCTCCTGCAGGTGGCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS-3UTR GCA 90 bp CCTGGAGTCTGGCCTGCCCTGGCTCGGGGCCCTGTGCGTCCTCCATGCCTCCCGAGTCAGCGGGCCACCTaGAGGAGCTCTTCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: PGVWPALARGPVRPPCLPSQRAT*RSSSVA
Trigger: GGCCACGGAAGAGCTCCTGCAGGTGGCCCGCTGACT...CGGGAGGCATGGAGGACGCACAGGGCCCCGAGCCAGGGCAGGCCAGACTCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS-3UTR GCA 90 bp ATTGGCCTTGAGCCGCTGCCCGTAGTCCGGCACCGAGCCCTGGCGGCTCCGCCCGCTTGGCTGCTCTCCTaGTGGACCTGTGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: IGLEPLPVVRHRALAAPPAWLLS*WTCAGL
Trigger: GAGCCCCGCACAGGTCCAGCAGGAGAGCAGCCAAGC...GGGCGGAGCCGCCAGGGCTCGGTGCCGGACTACGGGCAGCGGCTCAAGGCCAAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR CCA 90 bp CGGAGCTGCGGAGCCCGCCGCCGGCCTGGCCCGTGGTACGCTTCAGAGTGCGGTCCCTGGCGTAGACTGTaGACTCTTGGTCGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: RSCGARRRPGPWYASECGPWRRL*TLGRSP
Trigger: CGGGCTGCGACCAAGAGTCCACAGTCTACGCCAGGG...ACCGCACTCTGAAGCGTACCACGGGCCAGGCCGGCGGCGGGCTCCGCAGCTCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR TCA 90 bp CGGGGAGCGACTCGGAGCTGCGGAGCCCGCCGCCGGCCTGGCCCGTGGTACGCTTCCCCACACGGATGCTaGCTTCTTGGAAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RGATRSCGARRRPGPWYASPHGC*LLGRLK
Trigger: CTTCAGCCTTCCAAGAAGTCAGCATCCGTGTGGGGA...AGCGTACCACGGGCCAGGCCGGCGGCGGGCTCCGCAGCTCCGAGTCGCTCCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR CCA 90 bp ATTGGCCTTGAGCCGCTGCCCGTAGTCCGGCACCGAGCCCTGGCGGCTCCGCCCGATGGGGGTCCAGCTTaGCTGCTCTCCTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: IGLEPLPVVRHRALAAPPDGGPA*LLSCWT
Trigger: GGTCCAGCAGGAGAGCAGCCAAGCTGGACCCCCATC...GGGCGGAGCCGCCAGGGCTCGGTGCCGGACTACGGGCAGCGGCTCAAGGCCAAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR CCA 90 bp GCTTCAGAGTGCGGTATTCCCGGTAGAGCGCTGCGTGGGCGAGCGGGAGGCGGGCGGCCTGGCCTTGGCTaGGGCTCAGGGAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: ASECGIPGRALRGRAGGGRPGLG*GSGSCG
Trigger: TCCACAGCTCCCTGAGCCCCAGCCAAGGCCAGGCCG...CCCGCCTCCCGCTCGCCCACGCAGCGCTCTACCGGGAATACCGCACTCTGAAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR CCA 90 bp CGAGCCCTGGCGGCTCCGCCCTGGCGTAGACTGTGGACTCTTGGTCGCAGCCCGGAAGCCTCTGGGCCCTaGGAGCCAGCACCAGGACCA +
Preference number: 4 (lower is better)
Translates to: RALAAPPWRRLWTLGRSPEASGP*EPAPGP
Trigger: TGGTCCTGGTGCTGGCTCCCAGGGCCCAGAGGCTTC...CGGGCTGCGACCAAGAGTCCACAGTCTACGCCAGGGCGGAGCCGCCAGGGCTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR CCA 90 bp AGCGGGCCACCTGCAGGAGCTCTTCCGTGGCCAGGCCCACCAGGGCATGGAAGCGGCAGGGCCCGCAGCTaGGGAAGGCTACGCTGTGAA +
Preference number: 4 (lower is better)
Translates to: SGPPAGALPWPGPPGHGSGRARS*GRLRCE
Trigger: TTCACAGCGTAGCCTTCCCCAGCTGCGGGCCCTGCC...GCTTCCATGCCCTGGTGGGCCTGGCCACGGAAGAGCTCCTGCAGGTGGCCCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS-3UTR CCA 90 bp GGCCCGTGGTACGCTTCAGAGTGCGGTATTCCCGGTAGAGCGCTGCGTGGGCGAAGCCCGCCGCCGGCCTaGCCCGTGGTACGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: GPWYASECGIPGRALRGRSPPPA*PVVRFR
Trigger: TCTGAAGCGTACCACGGGCCAGGCCGGCGGCGGGCT...TCGCCCACGCAGCGCTCTACCGGGAATACCGCACTCTGAAGCGTACCACGGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
3UTR CAA 72 bp CCCTGGCGGCTCCGCCCTGGCGTAGACTGTGGACTCTaGGTCGCAGCCCGATTCAGATGGGGCCCCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PWRLRPGVDCGL*VAARFRWGPQQ
Trigger: CTGCTGGGGGCCCCATCTGAATCGGGCTGCGACCAAGAGTCCACAGTCTACGCCAGGGCGGAGCCGCCAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR GCA 90 bp TGGGCCCTGGGAGCCAGCACCAGGACCAAGGACAGCCGACTCACCAGGGATCAGCTCCTGCTGGACCTGTaGGGGGCTCTCCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: WALGASTRTKDSRLTRDQLLLDL*GALPGL
Trigger: GAGCCCTGGGAGAGCCCCGCACAGGTCCAGCAGGAG...CTGATCCCTGGTGAGTCGGCTGTCCTTGGTCCTGGTGCTGGCTCCCAGGGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR CCA 90 bp ACCCGACATCCCCCAATGCAGTGCAGTCAGCGGGCCACCTGCAGGAGCTCTTCCGAGTCTGGCCTGCCCTaGCTCGGGGCCCTGTGCGTC +
Preference number: 4 (lower is better)
Translates to: TRHPPMQCSQRATCRSSSESGLP*LGALCV
Trigger: GACGCACAGGGCCCCGAGCCAGGGCAGGCCAGACTC...GGAAGAGCTCCTGCAGGTGGCCCGCTGACTGCACTGCATTGGGGGATGTCGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS-3UTR CCA 90 bp GGTGCCTTTCAGATTGGCCTTGAGCCGCTGCCCGTAGTCCGGCACCGAGCCCTGCCCAGCCCCCTCCGATaGGGGTCCAGCTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GAFQIGLEPLPVVRHRALPSPLR*GSSLAA
Trigger: AGCAGCCAAGCTGGACCCCCATCGGAGGGGGCTGGG...CAGGGCTCGGTGCCGGACTACGGGCAGCGGCTCAAGGCCAATCTGAAAGGCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR CCA 90 bp CCCTGGCGTAGACTGTGGACTCTTGGTCGCAGCCCGATTCAGATGGGGCCCCCAGAGCCGGCCTGGCCTTaGCTGGGGCTCAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PWRRLWTLGRSPIQMGPPEPAWP*LGLREL
Trigger: CAGCTCCCTGAGCCCCAGCCAAGGCCAGGCCGGCTC...TGGGGGCCCCATCTGAATCGGGCTGCGACCAAGAGTCCACAGTCTACGCCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR CCA 90 bp CGGAGCTGCGGAGCCCGCCGCCGGCCTGGCCCGTGGTACGCTTCAGAGTGCGGTGGCCCCCAGAAAATCTaGGACCTCACTGTGACATCG +
Preference number: 4 (lower is better)
Translates to: RSCGARRRPGPWYASECGGPQKI*DLTVTS
Trigger: CGATGTCACAGTGAGGTCCCAGATTTTCTGGGGGCC...ACCGCACTCTGAAGCGTACCACGGGCCAGGCCGGCGGCGGGCTCCGCAGCTCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR TCA 90 bp GCTTCAGAGTGCGGTATTCCCGGTAGAGCGCTGCGTGGGCGAGCGGGAGGCGGGCTTTCAGATTGGCCTTaGGCCGCTGCCCGTAGTCCG +
Preference number: 4 (lower is better)
Translates to: ASECGIPGRALRGRAGGGLSDWP*AAARSP
Trigger: CGGACTACGGGCAGCGGCTCAAGGCCAATCTGAAAG...CCCGCCTCCCGCTCGCCCACGCAGCGCTCTACCGGGAATACCGCACTCTGAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR TCA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCGAGAGACGACCAACGTaGGGCAGGGGCTGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTAERRPT*GRGCAG
Trigger: GCCGGCGCAGCCCCTGCCTCACGTTGGTCGTCTCTC...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp GCTTCAGAGTGCGGTATTCCCGGTAGAGCGCTGCGTGGGCGAGCGGGAGGCGGGGACTTCTTGGAAGGCTaGAGCCTCTGGGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: ASECGIPGRALRGRAGGGDFLEG*SLWALG
Trigger: TCCCAGGGCCCAGAGGCTTCAGCCTTCCAAGAAGTC...CCCGCCTCCCGCTCGCCCACGCAGCGCTCTACCGGGAATACCGCACTCTGAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR GCA 90 bp CCTGCCCGTACACCTGGGCCGGGTAGCAGGGGCTTCCGATGCCGTGGAAGATGCTCAAGTCCCCCGGGCTaGGAAGGTGGAAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PARTPGPGSRGFRCRGRCSSPPG*EGGRPA
Trigger: AGCTGGCCTTCCACCTTCGCAGCCCGGGGGACTTGA...GCATCTTCCACGGCATCGGAAGCCCCTGCTACCCGGCCCAGGTGTACGGGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS-3UTR GCA 90 bp GCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCTGGCTCGGGGCCCTGTaGGTCCTCCATGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: ASSFPHPVAGFAQVLSHCWLGAL*VLHASR
Trigger: CCGGGAGGCATGGAGGACGCACAGGGCCCCGAGCCA...GCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCGCCGCCGTTCCCGGCTaGACATGCCCGCGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: ASSFPHPVAGFAQVLSHCAAVPG*TCPRGR
Trigger: CCTACCACGCGGGCATGTGCAGCCGGGAACGGCGGC...GCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp AGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCCACGGCCCCTTCCTaGTCCGAGGGCGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SLLVPTPCGRFCPGPQSLPTAPS*SEGGLV
Trigger: CACCAGGCCGCCCTCGGAGCAGGAAGGGGCCGTGGG...CAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp AGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGTCCGGCACCGAGCCCTaGCGGCTCCGCCCTGGCGTA +
Preference number: 4 (lower is better)
Translates to: SLLVPTPCGRFCPGPQSLSGTEP*RLRPGV
Trigger: TACGCCAGGGCGGAGCCGCCAGGGCTCGGTGCCGGA...CAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp CGGGCCACCTGCAGGAGCTCTTCCGTGGCCAGGCCCACCAGGGCATGGAAGCTCGGGAAGGCTACGCTGTaGAAGGCCTGGAAGGTTCTG +
Preference number: 4 (lower is better)
Translates to: RATCRSSSVARPTRAWKLGKATL*KAWKVL
Trigger: CAGAACCTTCCAGGCCTTTCACAGCGTAGCCTTCCC...GAGCTTCCATGCCCTGGTGGGCCTGGCCACGGAAGAGCTCCTGCAGGTGGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS-3UTR GCA 90 bp GGTATTTTCTCCAGAAGCGTCGGTCCTGCCCGTACACCTGGGCCGGGTAGCAGGCTGCGCTCCTCATCCTaGTGCTCCAGGCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GIFSRSVGPARTPGPGSRLRSSS*CSRQGP
Trigger: CGGGCCCTGCCTGGAGCAGCAGGATGAGGAGCGCAG...CCTGCTACCCGGCCCAGGTGTACGGGCAGGACCGACGCTTCTGGAGAAAATACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS-3UTR GCA 90 bp GCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCTGCGCTCCTCATCCTaGTGCTCCAGGCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: ASSFPHPVAGFAQVLSHCLRSSS*CSRQGP
Trigger: CGGGCCCTGCCTGGAGCAGCAGGATGAGGAGCGCAG...GCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACCTGCGCTCCTCATCCTaGTGCTCCAGGCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHLRSSS*CSRQGP
Trigger: CGGGCCCTGCCTGGAGCAGCAGGATGAGGAGCGCAG...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATTGGCTCGGGGCCCTGTaGGTCCTCCATGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHWLGAL*VLHASR
Trigger: CCGGGAGGCATGGAGGACGCACAGGGCCCCGAGCCA...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCTCCTGGAGTCTGGCCTaGCCTGGCTCGGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTASWSLA*PGSGPC
Trigger: ACAGGGCCCCGAGCCAGGGCAGGCCAGACTCCAGGA...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCGAGCCTGCTACGGAGTaGCCGGCCCCGCACGTAGTG +
Preference number: 4 (lower is better)
Translates to: ASSFPHPVAGFAQVLSHCEPATE*PAPHVV
Trigger: CACTACGTGCGGGGCCGGGCACTCCGTAGCAGGCTC...GCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATGCTTGCGGAGGAGCCTaGTACGGAGTGCCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHACGGA*YGVPGP
Trigger: GGGGCCGGGCACTCCGTAGCAGGCTCCTCCGCAAGC...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCGGGCGAAAGGCTTGGTaGCCCAGCTGCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ASSFPHPVAGFAQVLSHCGRKAW*PSCSRA
Trigger: GGCCCTGGAGCAGCTGGGGCACCAAGCCTTTCGCCC...GCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACGGGACCCAGGCTGCGTaGAGGCAGGTTCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHGTQAA*RQVRRS
Trigger: GCTCCTCCGAACCTGCCTGCACGCAGCCTGGGTCCC...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCCCACGGCCCCTTCCTaGTCCGAGGGCGGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMPTAPS*SEGGLV
Trigger: CACCAGGCCGCCCTCGGAGCAGGAAGGGGCCGTGGG...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCGAGTCTGGCCTGCCCTaGCTCGGGGCCCTGTGCGTC +
Preference number: 4 (lower is better)
Translates to: RSSVTALASDNPSSTRHPESGLP*LGALCV
Trigger: GACGCACAGGGCCCCGAGCCAGGGCAGGCCAGACTC...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAAGCCCGCCGCCGGCCTaGCCCGTGGTACGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SSVTALASDNPSSTRHPPSPPPA*PVVRFR
Trigger: TCTGAAGCGTACCACGGGCCAGGCCGGCGGCGGGCT...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGGCAGCCCGATTCAGATaGGGCCCCCAGCAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQAARFR*GPQQRG
Trigger: GCCCCGCTGCTGGGGGCCCCATCTGAATCGGGCTGC...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTTCCGGCACCGAGCCCTaGCGGCTCCGCCCTGGCGTA +
Preference number: 4 (lower is better)
Translates to: AFWSLLVPTPCGRFCPGPSGTEP*RLRPGV
Trigger: TACGCCAGGGCGGAGCCGCCAGGGCTCGGTGCCGGA...AGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCAGGCAGCTGTGCGGCTaGAGGGAGGCCTCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSRQLCG*REASRP
Trigger: GGGGCGGGAGGCCTCCCTCCAGCCGCACAGCTGCCT...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GTTTTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCAGGCAGCTGTGCGGCTaGAGGGAGGCCTCCCGCCCC +
Preference number: 4 (lower is better)
Translates to: VLPRSSVTALASDNPSSTRQLCG*REASRP
Trigger: GGGGCGGGAGGCCTCCCTCCAGCCGCACAGCTGCCT...GGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCCACTCTGGCCTGCCCTaGCTCGGGGCCCTGTGCGTC +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCHSGLP*LGALCV
Trigger: GACGCACAGGGCCCCGAGCCAGGGCAGGCCAGAGTG...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531875.2
CDS-3UTR CCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATGAGCCGGCCTGGCCTTaGCTGGGGCTCAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHEPAWP*LGLREL
Trigger: CAGCTCCCTGAGCCCCAGCCAAGGCCAGGCCGGCTC...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACGGCTGCAGGAAGAGGTaGCAGTGGGCAGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHGCRKR*QWAGCP
Trigger: CGGGCAGCCTGCCCACTGCCACCTCTTCCTGCAGCC...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGGGCCGAGCAGGTCCTTaGGCCTGGTGCTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQGRAGP*AWCCAP
Trigger: AGGAGCGCAGCACCAGGCTCAAGGACCTGCTCGGCC...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp TTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTGAGAGACGACCAACGTaGGGCAGGGGCTGCGCCGGC +
Preference number: 4 (lower is better)
Translates to: FGASSFPHPVAGFAQVLSERRPT*GRGCAG
Trigger: GCCGGCGCAGCCCCTGCCTCACGTTGGTCGTCTCTC...ACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCCCTGTGCGTCCTCCATaGCTCCCGGCTCCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTAPVRPP*LPAPAL
Trigger: AAGGGCAGGAGCCGGGAGGCATGGAGGACGCACAGG...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp AGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCAGAAGCGTCGGTCCTaGCCGTACACCTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: SLLVPTPCGRFCPGPQSLQKRRS*PYTWAG
Trigger: CCCGGCCCAGGTGTACGGGCAGGACCGACGCTTCTG...CAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCAGTCAGCGGGCCACCTaGAGGAGCTCTTCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTASQRAT*RSSSVA
Trigger: GGCCACGGAAGAGCTCCTGCAGGTGGCCCGCTGACT...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACTCCTGCTGGACCTGTaGGGGGCTCTCCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTRLLLDL*GALPGL
Trigger: GAGCCCTGGGAGAGCCCCGCACAGGTCCAGCAGGAG...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCGCTTGCGGAGGAGCCTaGTACGGAGTGCCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLACGGA*YGVPGP
Trigger: GGGGCCGGGCACTCCGTAGCAGGCTCCTCCGCAAGC...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCGCTTGGTGCCCCAGCTaGTCCAGGGCCTGGAACACC +
Preference number: 4 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTAAWCPS*SRAWNT
Trigger: GGTGTTCCAGGCCCTGGAGCAGCTGGGGCACCAAGC...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGAGGGCGAAAGGCTTGGTaGCCCAGCTGCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTRGRKAW*PSCSRA
Trigger: GGCCCTGGAGCAGCTGGGGCACCAAGCCTTTCGCCC...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACCAGGATCCGCATGACTaGACGCTCCTGCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHQDPHD*TLLPRA
Trigger: CGCCCTGGGCAGGAGCGTGCAGTCATGCGGATCCTG...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAGGGACCCAGGCTGCGTaGAGGCAGGTTCGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SSVTALASDNPSSTRHPPGTQAA*RQVRRS
Trigger: GCTCCTCCGAACCTGCCTGCACGCAGCCTGGGTCCC...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCGGCTCGTGGTCCCACTaGAGCTGGCAGAGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: RSSVTALASDNPSSTRHPGSWSH*SWQRAR
Trigger: GCGGGCTCTCTGCCAGCTGCAGTGGGACCACGAGCC...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGAGGCTCGTGGTCCCACTaGAGCTGGCAGAGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTRGSWSH*SWQRAR
Trigger: GCGGGCTCTCTGCCAGCTGCAGTGGGACCACGAGCC...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCGCACTCACTCTGGCCTaGCCTGGCTCGGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCALTLA*PGSGPC
Trigger: ACAGGGCCCCGAGCCAGGGCAGGCCAGAGTGAGTGC...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531875.2
CDS-3UTR GCA 90 bp TGGGGGCTCCCCACACGGATGCTGACTTCTTGGAAGGCTGAAGCCTCTGGGCCCAGGGATGCCTGCAGATaGTGGAGCCGGCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: WGLPTRMLTSWKAEASGPRDACR*WSRPGL
Trigger: AAGGCCAGGCCGGCTCCAGCATCTGCAGGCATCCCT...GGGCCCAGAGGCTTCAGCCTTCCAAGAAGTCAGCATCCGTGTGGGGAGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR GCA 90 bp TGGGGGCTCCCCACACGGATGCTGACTTCTTGGAAGGCTGAAGCCTCTGGGCCCTGGCTCAGGGATGCCTaGAGATGCTGGAGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: WGLPTRMLTSWKAEASGPWLRDA*RCWSRP
Trigger: AGGCCGGCTCCAGCATCTGCAGGCATCCCTGAGCCA...GGGCCCAGAGGCTTCAGCCTTCCAAGAAGTCAGCATCCGTGTGGGGAGCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR GCA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCGTTCCCGGCTGCACATaGCCGCGTGGTAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: RSSVTALASDNPSSTRHPVPGCT*PRGRPR
Trigger: CCGAGGCCTACCACGCGGGCATGTGCAGCCGGGAAC...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGTTCCCGGCTGCACATaGCCGCGTGGTAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: EPPRSHTLWQVLPRSSVTVPGCT*PRGRPR
Trigger: CCGAGGCCTACCACGCGGGCATGTGCAGCCGGGAAC...AGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGGCCGCCGTTCCCGGCTaGACATGCCCGCGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMAAVPG*TCPRGR
Trigger: CCTACCACGCGGGCATGTGCAGCCGGGAACGGCGGC...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGGAGTCTGGCCTGCCCTaGCTCGGGGCCCTGTGCGTC +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMESGLP*LGALCV
Trigger: GACGCACAGGGCCCCGAGCCAGGGCAGGCCAGACTC...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTCCCAATCCTGGAGTCTaGCCTGCCCTGGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: EPPRSHTLWQVLPRSSVTPNPGV*PALARG
Trigger: GCCCCGAGCCAGGGCAGGCCAGACTCCAGGATTGGG...AGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCCCCAATCCTGGAGTCTaGCCTGCCCTGGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCPNPGV*PALARG
Trigger: GCCCCGAGCCAGGGCAGGCCAGACTCCAGGATTGGG...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp AGCTCTACCCGACATCCCCCAATGCAGTGCAGTCAGCGGGCCACCTGCAGGAGCTGGTCCTCCCAATCCTaGAGTCTGGCCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SSTRHPPMQCSQRATCRSWSSQS*SLACPG
Trigger: GCCAGGGCAGGCCAGACTCCAGGATTGGGAGGACCA...GCTCCTGCAGGTGGCCCGCTGACTGCACTGCATTGGGGGATGTCGGGTAGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS-3UTR CCA 90 bp AGAAGCGTCGGTCCTGCCCGTACACCTGGGCCGGGTAGCAGGGGCTTCCGATGCATGTCGCAGCGGACCTaGTCCTCCCAATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: RSVGPARTPGPGSRGFRCMSQRT*SSQSWS
Trigger: ACTCCAGGATTGGGAGGACCAGGTCCGCTGCGACAT...GCATCGGAAGCCCCTGCTACCCGGCCCAGGTGTACGGGCAGGACCGACGCTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS-3UTR CCA 90 bp CAGGGCCTGGCGCTCCCGGGCCTGCACACGGCCATAGAGGAAGTCACATATCTGGGGCCACAGCCCTGCTaGAGAACTTCTCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: QGLALPGLHTAIEEVTYLGPQPC*RTSPLA
Trigger: GGCCAGAGGAGAAGTTCTCCAGCAGGGCTGTGGCCC...CAGATATGTGACTTCCTCTATGGCCGTGTGCAGGCCCGGGAGCGCCAGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS-3UTR CCA 90 bp GCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCGCAGGAGCTCTTCCGTaGCCAGGCCCACCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: ASSFPHPVAGFAQVLSHCAGALP*PGPPGH
Trigger: ATGCCCTGGTGGGCCTGGCCACGGAAGAGCTCCTGC...GCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCCGCCGGCCTGGCCCGTaGTACGCTTCAGAGTGCGGT +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCRRPGP*YASECG
Trigger: ACCGCACTCTGAAGCGTACCACGGGCCAGGCCGGCG...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCAGCCCGCCGCCGGCCTaGCCCGTGGTACGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVSPPPA*PVVRFR
Trigger: TCTGAAGCGTACCACGGGCCAGGCCGGCGGCGGGCT...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGGCAGCCCGATTCAGATaGGGCCCCCAGCAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMAARFR*GPQQRG
Trigger: GCCCCGCTGCTGGGGGCCCCATCTGAATCGGGCTGC...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CCCTGGCGTAGACTGTGGACTCTTGGTCGCAGCCCGATTCAGATGGGGCCCCCACTGGCGGCTCCGCCCTaGCGTAGACTGTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: PWRRLWTLGRSPIQMGPPLAAPP*RRLWTL
Trigger: AAGAGTCCACAGTCTACGCCAGGGCGGAGCCGCCAG...TGGGGGCCCCATCTGAATCGGGCTGCGACCAAGAGTCCACAGTCTACGCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR CCA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCACCCAGCCCCCTCCGATaGGGGTCCAGCTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSVTALASDNPSSTRHPPPSPLR*GSSLAA
Trigger: AGCAGCCAAGCTGGACCCCCATCGGAGGGGGCTGGG...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACCCCCAGGGAGTAGAGTaGCAGCACGGTGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHPQGVE*QHGGVQ
Trigger: CTGGACCCCACCGTGCTGCCACTCTACTCCCTGGGG...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCAGGTTGGTGGGAACTaGGGCTGGCCCGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: ASSFPHPVAGFAQVLSHCQVGGN*GWPVEV
Trigger: GACCTCCACGGGCCAGCCCCAGTTCCCACCAACCTG...GCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCGCCGCACACCTGTCCTaGGCTCGTGGTCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTAAAHLS*ARGPTA
Trigger: TGCAGTGGGACCACGAGCCCAGGACAGGTGTGCGGC...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACAGGAAGAGGTGGCAGTaGGCAGGCTGCCCGTCACGC +
Preference number: 4 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHRKRWQ*AGCPSR
Trigger: GCGTGACGGGCAGCCTGCCCACTGCCACCTCTTCCT...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGGGCCGAGCAGGTCCTTaGGCCTGGTGCTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMGRAGP*AWCCAP
Trigger: AGGAGCGCAGCACCAGGCTCAAGGACCTGCTCGGCC...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCGGCCGAGCAGGTCCTTaGGCCTGGTGCTGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVGRAGP*AWCCAP
Trigger: AGGAGCGCAGCACCAGGCTCAAGGACCTGCTCGGCC...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCACTCTGCCAACTGCCCTaGGGGCCCCAGGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: SSVTALASDNPSSTRHPPLCQLP*GPQGVE
Trigger: CTCTACTCCCTGGGGCCCTCAGGGCAGTTGGCAGAG...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACCAGACAGGATCCGCATaGCTGCACGCTCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHQTGSA*LHAPAQ
Trigger: CTGGGCAGGAGCGTGCAGTCATGCGGATCCTGTCTG...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCGTATGCAGGCCGCCTTaGGACACGGTGGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCVCRPP*DTVAGQ
Trigger: CTGGCCTGCCACCGTGTCTCAAGGCGGCCTGCATAC...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCGCAACTGGCCCTGCATaGAGGCTCGCTGTACCCGCC +
Preference number: 4 (lower is better)
Translates to: RSSVTALASDNPSSTRHPATGPA*RLAVPA
Trigger: GGCGGGTACAGCGAGCCTTCATGCAGGGCCAGTTGC...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCCGCTCCTCATCCTGCTaGTCCAGGCAGGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSRSSSC*SRQGPQ
Trigger: CTGCGGGCCCTGCCTGGAGCAGCAGGATGAGGAGCG...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGCTGCGCTCCTCATCCTaGTGCTCCAGGCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: FWSLLVPTPCGRFCPGPQLRSSS*CSRQGP
Trigger: CGGGCCCTGCCTGGAGCAGCAGGATGAGGAGCGCAG...CTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGCCTGTGCGTCCTCCATaGCTCCCGGCTCCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQPVRPP*LPAPAL
Trigger: AAGGGCAGGAGCCGGGAGGCATGGAGGACGCACAGG...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCTGTGCGTCCTCCATaGCTCCCGGCTCCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: RSSVTALASDNPSSTRHPPVRPP*LPAPAL
Trigger: AAGGGCAGGAGCCGGGAGGCATGGAGGACGCACAGG...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTTGGCTCGGGGCCCTGTaGGTCCTCCATGCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SAFWSLLVPTPCGRFCPGWLGAL*VLHASR
Trigger: CCGGGAGGCATGGAGGACGCACAGGGCCCCGAGCCA...ACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTTCCTGGAGTCTGGCCTaGCCTGGCTCGGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: FGASSFPHPVAGFAQVLSSWSLA*PGSGPC
Trigger: ACAGGGCCCCGAGCCAGGGCAGGCCAGACTCCAGGA...ACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGCGATGCCGTGGAAGATaGGGGCCACAGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQRCRGR*GPQPCW
Trigger: CCAGCAGGGCTGTGGCCCGCATCTTCCACGGCATCG...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCAGAAGCGTCGGTCCTaGCCGTACACCTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: FGASSFPHPVAGFAQVLSQKRRS*PYTWAG
Trigger: CCCGGCCCAGGTGTACGGGCAGGACCGACGCTTCTG...ACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCCAGAAGCGTCGGTCCTaGCCGTACACCTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLQKRRS*PYTWAG
Trigger: CCCGGCCCAGGTGTACGGGCAGGACCGACGCTTCTG...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATAGTCAGCGGGCCACCTaGAGGAGCTCTTCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHSQRAT*RSSSVA
Trigger: GGCCACGGAAGAGCTCCTGCAGGTGGCCCGCTGACT...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACCATCCCCCAATGCAGTaGAGTCAGCGGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHHPPMQ*SQRATC
Trigger: GCAGGTGGCCCGCTGACTGCACTGCATTGGGGGATG...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACCCCGACATCCCCCAATaGAGTGCAGTCAGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHPDIPQ*SAVSGP
Trigger: TGGCCCGCTGACTGCACTGCATTGGGGGATGTCGGG...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCCTCCTGCTGGACCTGTaGGGGGCTCTCCCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSLLLDL*GALPGL
Trigger: GAGCCCTGGGAGAGCCCCGCACAGGTCCAGCAGGAG...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCGGGGTCCAGCTTGGCTaGTCTCCTGCTGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTAGVQLG*SPAGPV
Trigger: CACAGGTCCAGCAGGAGAGCAGCCAAGCTGGACCCC...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCGAGCCTGCTACGGAGTaGCCGGCCCCGCACGTAGTG +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSEPATE*PAPHVV
Trigger: CACTACGTGCGGGGCCGGGCACTCCGTAGCAGGCTC...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCCCCTGGGACCCAGGCTaGGTGCAGGCAGGTTCGGAG +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSPWDPG*VQAGSE
Trigger: CTCCGAACCTGCCTGCACGCAGCCTGGGTCCCAGGG...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGAGGGTCCTCAGGCAGCTaGTGGGCCAAGCACACAGCC +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTRGSSGS*WAKHTA
Trigger: GGCTGTGTGCTTGGCCCAGCAGCTGCCTGAGGACCC...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCGGCTCGTGGTCCCACTaGAGCTGGCAGAGAGCCCGC +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSGSWSH*SWQRAR
Trigger: GCGGGCTCTCTGCCAGCTGCAGTGGGACCACGAGCC...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCCCGCTGGCTCAGGGATaGCTGCAGATGCTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCPLAQG*LQMLEP
Trigger: CGGCTCCAGCATCTGCAGGCATCCCTGAGCCAGCGG...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCACCCGGCCTCCGCGCTTaGGATCGTCCAGCGAATCTC +
Preference number: 4 (lower is better)
Translates to: SSVTALASDNPSSTRHPPPGLRA*DRPANL
Trigger: GAGATTCGCTGGACGATCGCAAGCGCGGAGGCCGGG...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000621189.4
CDS-3UTR CCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCCCCAATCCTGGAGTCTaGCCTGCCCTGGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLPNPGV*PALARG
Trigger: GCCCCGAGCCAGGGCAGGCCAGACTCCAGGATTGGG...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCTCAGGGACAGGAACTaGCGGATGTCGCAGCGGACC +
Preference number: 4 (lower is better)
Translates to: ASSFPHPVAGFAQVLSHCLRDRN*RMSQRT
Trigger: GGTCCGCTGCGACATCCGCCAGTTCCTGTCCCTGAG...GCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCGGGCCACAGCCCTGCTaGAGAACTTCTCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTAGPQPC*RTSPLA
Trigger: GGCCAGAGGAGAAGTTCTCCAGCAGGGCTGTGGCCC...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATGGGCTTCCGATGCCGTaGAAGATGCGGGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHGLPMP*KMRATA
Trigger: GGCTGTGGCCCGCATCTTCCACGGCATCGGAAGCCC...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp AGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGGGGCTTCCGATGCCGTaGAAGATGCGGGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: SLLVPTPCGRFCPGPQSLGLPMP*KMRATA
Trigger: GGCTGTGGCCCGCATCTTCCACGGCATCGGAAGCCC...CAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAGCAGGAGCTCTTCCGTaGCCAGGCCCACCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SSVTALASDNPSSTRHPPAGALP*PGPPGH
Trigger: ATGCCCTGGTGGGCCTGGCCACGGAAGAGCTCCTGC...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCATGGCTGCTCTCCTGCTaGACCTGTGCGGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SSVTALASDNPSSTRHPPWLLSC*TCAGLS
Trigger: GGAGAGCCCCGCACAGGTCCAGCAGGAGAGCAGCCA...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACGTCTTCCTCACTTGCTaGCCGGGGACACTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHVFLTC*PGTLGC
Trigger: GCAGCCCAGTGTCCCCGGCCAGCAAGTGAGGAAGAC...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTCCCCAGGGAGTAGAGTaGCAGCACGGTGGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: EPPRSHTLWQVLPRSSVTPQGVE*QHGGVQ
Trigger: CTGGACCCCACCGTGCTGCCACTCTACTCCCTGGGG...AGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp AGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGAGCTGCTCCAGGGCCTaGAACACCTCAGCCGGCGTC +
Preference number: 4 (lower is better)
Translates to: SLLVPTPCGRFCPGPQSLSCSRA*NTSAGV
Trigger: GACGCCGGCTGAGGTGTTCCAGGCCCTGGAGCAGCT...CAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGCCAGGGCGAAAGGCTTaGTGCCCCAGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQPGRKA*CPSCSR
Trigger: CCTGGAGCAGCTGGGGCACCAAGCCTTTCGCCCTGG...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGACTGGGGCTGGCCCGTaGAGGTCAGGCTCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQTGAGP*RSGSSA
Trigger: GGCTGAAGAGCCTGACCTCCACGGGCCAGCCCCAGT...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTGGTGGGAACTGGGGCTaGCCCGTGGAGGTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: FGASSFPHPVAGFAQVLSGGNWG*PVEVRL
Trigger: GAGCCTGACCTCCACGGGCCAGCCCCAGTTCCCACC...ACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGGGTGGGAACTGGGGCTaGCCCGTGGAGGTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMGGNWG*PVEVRL
Trigger: GAGCCTGACCTCCACGGGCCAGCCCCAGTTCCCACC...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCCGGAAAGGTGCAGGTTaGTGGGAACTGGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTARKGAG*WELGLA
Trigger: GGCCAGCCCCAGTTCCCACCAACCTGCACCTTTCCG...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCCCTGTCCTGGGCTCGTaGTCCCACTGCAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCPVLGS*SHCSWQ
Trigger: CTGCCAGCTGCAGTGGGACCACGAGCCCAGGACAGG...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTCCTGTCCTGGGCTCGTaGTCCCACTGCAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: EPPRSHTLWQVLPRSSVTPVLGS*SHCSWQ
Trigger: CTGCCAGCTGCAGTGGGACCACGAGCCCAGGACAGG...AGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGAGCCGCACACCTGTCCTaGGCTCGTGGTCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTRAAHLS*ARGPTA
Trigger: TGCAGTGGGACCACGAGCCCAGGACAGGTGTGCGGC...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCGGCCTGGCCTTGGCTaGGGCTCAGGGAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: FGASSFPHPVAGFAQVLSRPGLG*GSGSCG
Trigger: TCCACAGCTCCCTGAGCCCCAGCCAAGGCCAGGCCG...ACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCCGGCCTGGCCTTGGCTaGGGCTCAGGGAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLRPGLG*GSGSCG
Trigger: TCCACAGCTCCCTGAGCCCCAGCCAAGGCCAGGCCG...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp ATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGAGCCGGCCTGGCCTTaGCTGGGGCTCAGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ILEPPRSHTLWQVLPRSSEPAWP*LGLREL
Trigger: CAGCTCCCTGAGCCCCAGCCAAGGCCAGGCCGGCTC...TGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCAGGGAGCCCAGCCGCTaGCTCAGGGATGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCREPSR*LRDACR
Trigger: TCTGCAGGCATCCCTGAGCCAGCGGCTGGGCTCCCT...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGAAGCCTCTGGGCCCTaGGAGCCAGCACCAGGACCA +
Preference number: 4 (lower is better)
Translates to: EPPRSHTLWQVLPRSSVTEASGP*EPAPGP
Trigger: TGGTCCTGGTGCTGGCTCCCAGGGCCCAGAGGCTTC...AGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGAGAAGCCTCTGGGCCCTaGGAGCCAGCACCAGGACCA +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTREASGP*EPAPGP
Trigger: TGGTCCTGGTGCTGGCTCCCAGGGCCCAGAGGCTTC...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACGGTGCAGGTGCAGGCTaGGAACACGCGCTGTACCAG +
Preference number: 4 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHGAGAG*EHALYQ
Trigger: CTGGTACAGCGCGTGTTCCCAGCCTGCACCTGCACC...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACGGTCCTGGGGCTGCTTaGTGGCTAAGCTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHGPGAA*WLSCSA
Trigger: GGCTGAGCAGCTTAGCCACCAAGCAGCCCCAGGACC...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCGACAGGCCCTGTACCTaGGGGCTTTGGGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: ASSFPHPVAGFAQVLSHCDRPCT*GLWGGC
Trigger: GCATCCACCCCAAAGCCCCCAGGTACAGGGCCTGTC...GCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACACCACCACCCGCAACTaGCCCTGCATGAAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHTTTRN*PCMKAR
Trigger: GCGAGCCTTCATGCAGGGCCAGTTGCGGGTGGTGGT...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCTCCCAAAGGCCACCGTaGCCACCACCACCCGCAACT +
Preference number: 4 (lower is better)
Translates to: ASSFPHPVAGFAQVLSHCSQRPP*PPPPAT
Trigger: AGTTGCGGGTGGTGGTGGCCACGGTGGCCTTTGGGA...GCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GTTTTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCACAGCCCGCACATCTaGCCGGTCCAGCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: VLPRSSVTALASDNPSSTHSPHI*PVQPHP
Trigger: GGGATGGGGCTGGACCGGCCAGATGTGCGGGCTGTG...GGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCCACAGCCCGCACATCTaGCCGGTCCAGCCCCATCCC +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSHSPHI*PVQPHP
Trigger: GGGATGGGGCTGGACCGGCCAGATGTGCGGGCTGTG...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTAGGAAGAGGTGGCAGTaGGCAGGCTGCCCGTCACGC +
Preference number: 4 (lower is better)
Translates to: EPPRSHTLWQVLPRSSVTRKRWQ*AGCPSR
Trigger: GCGTGACGGGCAGCCTGCCCACTGCCACCTCTTCCT...AGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCGCAGGTCTTCGCCCTaGGGCTGCAGGAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RSSVTALASDNPSSTRHPRRSSP*GCRKRW
Trigger: CCACCTCTTCCTGCAGCCCCAGGGCGAAGACCTGCG...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCGCAGGTCTTCGCCCTaGGGCTGCAGGAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHRRSSP*GCRKRW
Trigger: CCACCTCTTCCTGCAGCCCCAGGGCGAAGACCTGCG...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACCTTTCAGATTGGCCTTaGGCCGCTGCCCGTAGTCCG +
Preference number: 4 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHLSDWP*AAARSP
Trigger: CGGACTACGGGCAGCGGCTCAAGGCCAATCTGAAAG...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCACTTGACTGGAGGGGCTaGGTCCGTGGTACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: SSVTALASDNPSSTRHPPLDWRG*VRGTWG
Trigger: ACCCCAGGTACCACGGACTCAGCCCCTCCAGTCAAG...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCCTTGACTGGAGGGGCTaGGTCCGTGGTACCTGGGGT +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCLDWRG*VRGTWG
Trigger: ACCCCAGGTACCACGGACTCAGCCCCTCCAGTCAAG...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCTGCCAACTGCCCTaGGGGCCCCAGGGAGTAGAG +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVLCQLP*GPQGVE
Trigger: CTCTACTCCCTGGGGCCCTCAGGGCAGTTGGCAGAG...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp TTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTGTATGCAGGCCGCCTTaGGACACGGTGGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: FGASSFPHPVAGFAQVLSVCRPP*DTVAGQ
Trigger: CTGGCCTGCCACCGTGTCTCAAGGCGGCCTGCATAC...ACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp GGCCCGTGGTACGCTTCAGAGTGCGGTATTCCCGGTAGAGCGCTGCGTGGGCGAGTGGAGGCTCATCACTaGCTTTTTCTGCAGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GPWYASECGIPGRALRGRVEAHH*LFLQGA
Trigger: GGCACCCTGCAGAAAAAGTCAGTGATGAGCCTCCAC...TCGCCCACGCAGCGCTCTACCGGGAATACCGCACTCTGAAGCGTACCACGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR TCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGGCAACTGGCCCTGCATaGAGGCTCGCTGTACCCGCC +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMATGPA*RLAVPA
Trigger: GGCGGGTACAGCGAGCCTTCATGCAGGGCCAGTTGC...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCTCAAGTCCCCCGGGCTaGGAAGGTGGAAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RSSVTALASDNPSSTRHPSSPPG*EGGRPA
Trigger: AGCTGGCCTTCCACCTTCGCAGCCCGGGGGACTTGA...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTTCAAGTCCCCCGGGCTaGGAAGGTGGAAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: EPPRSHTLWQVLPRSSVTSSPPG*EGGRPA
Trigger: AGCTGGCCTTCCACCTTCGCAGCCCGGGGGACTTGA...AGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCCCTGTGCGTCCTCCATaGCTCCCGGCTCCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSPVRPP*LPAPAL
Trigger: AAGGGCAGGAGCCGGGAGGCATGGAGGACGCACAGG...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GTTTTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGATGCCGTGGAAGATaGGGGCCACAGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: VLPRSSVTALASDNPSSTRCRGR*GPQPCW
Trigger: CCAGCAGGGCTGTGGCCCGCATCTTCCACGGCATCG...GGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCGATGCCGTGGAAGATaGGGGCCACAGCCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AFWSLLVPTPCGRFCPGPRCRGR*GPQPCW
Trigger: CCAGCAGGGCTGTGGCCCGCATCTTCCACGGCATCG...AGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGAGCAGGGGCTTCCGATaGCGTGGAAGATGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQSRGFR*RGRCGP
Trigger: TGGCCCGCATCTTCCACGGCATCGGAAGCCCCTGCT...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTAGCAGGGGCTTCCGATaGCGTGGAAGATGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: EPPRSHTLWQVLPRSSVTSRGFR*RGRCGP
Trigger: TGGCCCGCATCTTCCACGGCATCGGAAGCCCCTGCT...AGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CATAGAGGAAGTCACATATCTGGTCCTTCTCCTCAGCGGTCAAGTCCCCCGGGCCAGAAGCGTCGGTCCTaGCCGTACACCTGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: HRGSHISGPSPQRSSPPGQKRRS*PYTWAG
Trigger: CCCGGCCCAGGTGTACGGGCAGGACCGACGCTTCTG...GCCCGGGGGACTTGACCGCTGAGGAGAAGGACCAGATATGTGACTTCCTCTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS-3UTR GCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGAGTCAGCGGGCCACCTaGAGGAGCTCTTCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMSQRAT*RSSSVA
Trigger: GGCCACGGAAGAGCTCCTGCAGGTGGCCCGCTGACT...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTaGAGTCAGCGGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTRHPPMQ*SQRATC
Trigger: GCAGGTGGCCCGCTGACTGCACTGCATTGGGGGATG...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCACATCCCCCAATGCAGTaGAGTCAGCGGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: SSVTALASDNPSSTRHPPHPPMQ*SQRATC
Trigger: GCAGGTGGCCCGCTGACTGCACTGCATTGGGGGATG...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGGCTTGGCTGCTCTCCTaGTGGACCTGTGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMAWLLS*WTCAGL
Trigger: GAGCCCCGCACAGGTCCAGCAGGAGAGCAGCCAAGC...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GGACCTCACTGTGACATCGCTGTAACCAGCCAGGATCTAGGGAGCCCAGCCGCTGGGGTCCAGCTTGGCTaGTCTCCTGCTGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: GPHCDIAVTSQDLGSPAAGVQLG*SPAGPV
Trigger: CACAGGTCCAGCAGGAGAGCAGCCAAGCTGGACCCC...AGCGGCTGGGCTCCCTAGATCCTGGCTGGTTACAGCGATGTCACAGTGAGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR GCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGGGTTCGATGGGCTGCTaGAGGGCTGAGGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQGSMGC*RAEVAV
Trigger: CACAGCCACCTCAGCCCTGCAGCAGCCCATCGAACC...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCGCTTCCATGCCTGCTTaGGGAGGAGCCTGCTACGGA +
Preference number: 4 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTAASMPA*GGACYG
Trigger: TCCGTAGCAGGCTCCTCCGCAAGCAGGCATGGAAGC...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACCGGGGACACTGGGCTaGCCAGTGATCGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTRPGTLG*PVIELL
Trigger: GAGCAGTTCGATCACTGGGCAGCCCAGTGTCCCCGG...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGCCGGGGACACTGGGCTaGCCAGTGATCGAACTGCTC +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQPGTLG*PVIELL
Trigger: GAGCAGTTCGATCACTGGGCAGCCCAGTGTCCCCGG...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGGCTTGGTGCCCCAGCTaGTCCAGGGCCTGGAACACC +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMAWCPS*SRAWNT
Trigger: GGTGTTCCAGGCCCTGGAGCAGCTGGGGCACCAAGC...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCCAGGATCCGCATGACTaGACGCTCCTGCCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLQDPHD*TLLPRA
Trigger: CGCCCTGGGCAGGAGCGTGCAGTCATGCGGATCCTG...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTCCCGCCCCCACCAGTaGCTCAGGTGTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQSRPHQ*LRCQHQ
Trigger: CTGATGCTGACACCTGAGGCACTGGTGGGGGCGGGA...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCGCTCCCGAAGCACCTTaGAGACGCGCAGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCAPEAP*RRAGSR
Trigger: CCTGCTACCTGCGCGTCTGCAAGGTGCTTCGGGAGC...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAAGCAGTGCACGCCCATaGGCTCCCGAAGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: SSVTALASDNPSSTRHPPSSARP*APEAPC
Trigger: GCAAGGTGCTTCGGGAGCGCATGGGCGTGCACTGCT...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp AGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGAGCAGTGCACGCCCATaGGCTCCCGAAGCACCTTGC +
Preference number: 4 (lower is better)
Translates to: SLLVPTPCGRFCPGPQSLSSARP*APEAPC
Trigger: GCAAGGTGCTTCGGGAGCGCATGGGCGTGCACTGCT...CAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTAGGCCCAGGAAGCAGTaGACGCCCATGCGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: AFWSLLVPTPCGRFCPGPRPRKQ*TPMRSR
Trigger: TCGGGAGCGCATGGGCGTGCACTGCTTCCTGGGCCT...AGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCAGGCCCAGGAAGCAGTaGACGCCCATGCGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVRPRKQ*TPMRSR
Trigger: TCGGGAGCGCATGGGCGTGCACTGCTTCCTGGGCCT...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCCACGTCACTGGCAGTaGGGCGTGTGGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: FGASSFPHPVAGFAQVLSPRHWQ*GVWLWL
Trigger: CAGCCACAGCCACACGCCGCACTGCCAGTGACGTGG...ACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCCCACGTCACTGGCAGTaGGGCGTGTGGCTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLPRHWQ*GVWLWL
Trigger: CAGCCACAGCCACACGCCGCACTGCCAGTGACGTGG...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp ATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCACCCTGGGACCCAGGCTaGGTGCAGGCAGGTTCGGAG +
Preference number: 4 (lower is better)
Translates to: ILEPPRSHTLWQVLPRSSPWDPG*VQAGSE
Trigger: CTCCGAACCTGCCTGCACGCAGCCTGGGTCCCAGGG...TGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCGGGTCCTCAGGCAGCTaGTGGGCCAAGCACACAGCC +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLGSSGS*WAKHTA
Trigger: GGCTGTGTGCTTGGCCCAGCAGCTGCCTGAGGACCC...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAACTCCACGGAGCTGCTaGCTTGCCCTGGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SSVTALASDNPSSTRHPPTPRSC*LALGPQ
Trigger: CTGAGGACCCAGGGCAAGGCAGCAGCTCCGTGGAGT...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGACTCCACGGAGCTGCTaGCTTGCCCTGGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQTPRSC*LALGPQ
Trigger: CTGAGGACCCAGGGCAAGGCAGCAGCTCCGTGGAGT...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAAGGGATGCCTGCAGATaGTGGAGCCGGCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: SSVTALASDNPSSTRHPPRDACR*WSRPGL
Trigger: AAGGCCAGGCCGGCTCCAGCATCTGCAGGCATCCCT...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATTGGCTCAGGGATGCCTaGAGATGCTGGAGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHWLRDA*RCWSRP
Trigger: AGGCCGGCTCCAGCATCTGCAGGCATCCCTGAGCCA...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TGGGAGCCAGCACCAGGACCAAGGACAGCCGACTCACCAGGGATCAGAAGTTGTCCGCTGGCTCAGGGATaGCTGCAGATGCTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: WEPAPGPRTADSPGIRSCPLAQG*LQMLEP
Trigger: CGGCTCCAGCATCTGCAGGCATCCCTGAGCCAGCGG...ACAACTTCTGATCCCTGGTGAGTCGGCTGTCCTTGGTCCTGGTGCTGGCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR GCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCCCGCTGGCTCAGGGATaGCTGCAGATGCTGGAGCCG +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSPLAQG*LQMLEP
Trigger: CGGCTCCAGCATCTGCAGGCATCCCTGAGCCAGCGG...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAAGCCTAGATCAGGCCTaGAGGCTTTGGGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SSVTALASDNPSSTRHPPSLDQA*RLWGPP
Trigger: TGGGGGCCCCCAAAGCCTGCAGGCCTGATCTAGGCT...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCAGCCAGGAAGTCCGTaGTGTCGGCGTGCACATGTC +
Preference number: 4 (lower is better)
Translates to: ASSFPHPVAGFAQVLSHCQPGSP*CRRAHV
Trigger: GACATGTGCACGCCGACAGCACGGACTTCCTGGCTG...GCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCACCCGCAACTGGCCCTaGATGAAGGCTCGCTGTACC +
Preference number: 4 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTATRNWP*MKARCT
Trigger: GGTACAGCGAGCCTTCATGCAGGGCCAGTTGCGGGT...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCGGGGGCAGCCCCAGATaGAGCACAGCCCGCACATCT +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLGGSPR*STARTS
Trigger: AGATGTGCGGGCTGTGCTGCATCTGGGGCTGCCCCC...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GTGCAGGTATTTTCTCCAGAAGCGTCGGTCCTGCCCGTACACCTGGGCCGGGTACCCGGGCTGCGAAGGTaGAAGGCCAGCTCACTGAAC +
Preference number: 4 (lower is better)
Translates to: VQVFSPEASVLPVHLGRVPGLRR*KASSLN
Trigger: GTTCAGTGAGCTGGCCTTCCACCTTCGCAGCCCGGG...TACCCGGCCCAGGTGTACGGGCAGGACCGACGCTTCTGGAGAAAATACCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS-3UTR CCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACCCGGGCTGCGAAGGTaGAAGGCCAGCTCACTGAAC +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTRPGLRR*KASSLN
Trigger: GTTCAGTGAGCTGGCCTTCCACCTTCGCAGCCCGGG...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGATGGTCCTCCCAATCCTaGAGTCTGGCCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTRWSSQS*SLACPG
Trigger: GCCAGGGCAGGCCAGACTCCAGGATTGGGAGGACCA...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GTGCAGGTATTTTCTCCAGAAGCGTCGGTCCTGCCCGTACACCTGGGCCGGGTACTCAGGGACAGGAACTaGCGGATGTCGCAGCGGACC +
Preference number: 4 (lower is better)
Translates to: VQVFSPEASVLPVHLGRVLRDRN*RMSQRT
Trigger: GGTCCGCTGCGACATCCGCCAGTTCCTGTCCCTGAG...TACCCGGCCCAGGTGTACGGGCAGGACCGACGCTTCTGGAGAAAATACCTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS-3UTR CCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGCTCAGGGACAGGAACTaGCGGATGTCGCAGCGGACC +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQLRDRN*RMSQRT
Trigger: GGTCCGCTGCGACATCCGCCAGTTCCTGTCCCTGAG...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCGGGCCACAGCCCTGCTaGAGAACTTCTCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCGPQPC*RTSPLA
Trigger: GGCCAGAGGAGAAGTTCTCCAGCAGGGCTGTGGCCC...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GTTTTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCGGGCTTCCGATGCCGTaGAAGATGCGGGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: VLPRSSVTALASDNPSSTGLPMP*KMRATA
Trigger: GGCTGTGGCCCGCATCTTCCACGGCATCGGAAGCCC...GGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCGCCGGCCTGGCCCGTaGTACGCTTCAGAGTGCGGT +
Preference number: 4 (lower is better)
Translates to: SAFWSLLVPTPCGRFCPGRRPGP*YASECG
Trigger: ACCGCACTCTGAAGCGTACCACGGGCCAGGCCGGCG...ACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GCCGACTCACCAGGGATCAGAAGTTGTGATTCCTCTGAGCCTAGATCAGGCCTGGCAGCCCGATTCAGATaGGGCCCCCAGCAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: ADSPGIRSCDSSEPRSGLAARFR*GPQQRG
Trigger: GCCCCGCTGCTGGGGGCCCCATCTGAATCGGGCTGC...CAGGCCTGATCTAGGCTCAGAGGAATCACAACTTCTGATCCCTGGTGAGTCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR CCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGCCCTGGCGTAGACTGTaGACTCTTGGTCGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQPWRRL*TLGRSP
Trigger: CGGGCTGCGACCAAGAGTCCACAGTCTACGCCAGGG...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCCCCTGGCGTAGACTGTaGACTCTTGGTCGCAGCCCG +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCPWRRL*TLGRSP
Trigger: CGGGCTGCGACCAAGAGTCCACAGTCTACGCCAGGG...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TGGGAGCCAGCACCAGGACCAAGGACAGCCGACTCACCAGGGATCAGAAGTTGTTGGCTGCTCTCCTGCTaGACCTGTGCGGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: WEPAPGPRTADSPGIRSCWLLSC*TCAGLS
Trigger: GGAGAGCCCCGCACAGGTCCAGCAGGAGAGCAGCCA...ACAACTTCTGATCCCTGGTGAGTCGGCTGTCCTTGGTCCTGGTGCTGGCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR CCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTGGCTGCTCTCCTGCTaGACCTGTGCGGGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSWLLSC*TCAGLS
Trigger: GGAGAGCCCCGCACAGGTCCAGCAGGAGAGCAGCCA...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAGTACCTGGGGTTCGATaGGCTGCTGCAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SSVTALASDNPSSTRHPPVPGVR*AAAGLR
Trigger: CCTCAGCCCTGCAGCAGCCCATCGAACCCCAGGTAC...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGGTACCTGGGGTTCGATaGGCTGCTGCAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQVPGVR*AAAGLR
Trigger: CCTCAGCCCTGCAGCAGCCCATCGAACCCCAGGTAC...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCGAGGGGCTGAGTCCGTaGTACCTGGGGTTCGATGGG +
Preference number: 4 (lower is better)
Translates to: RSSVTALASDNPSSTRHPEGLSP*YLGFDG
Trigger: CCCATCGAACCCCAGGTACCACGGACTCAGCCCCTC...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGAGGGGCTGAGTCCGTaGTACCTGGGGTTCGATGGG +
Preference number: 4 (lower is better)
Translates to: EPPRSHTLWQVLPRSSVTEGLSP*YLGFDG
Trigger: CCCATCGAACCCCAGGTACCACGGACTCAGCCCCTC...AGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCGTCTTCCTCACTTGCTaGCCGGGGACACTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RSSVTALASDNPSSTRHPVFLTC*PGTLGC
Trigger: GCAGCCCAGTGTCCCCGGCCAGCAAGTGAGGAAGAC...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCGGTGGGGTCCAGGCTaGGCACCTCAGGTACAGGTT +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHRWGPG*APQVQV
Trigger: AACCTGTACCTGAGGTGCCCAGCCTGGACCCCACCG...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCCAGGGCGAAAGGCTTaGTGCCCCAGCTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVPGRKA*CPSCSR
Trigger: CCTGGAGCAGCTGGGGCACCAAGCCTTTCGCCCTGG...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCGCCTTGAGACACGGTaGCAGGCCAGACACCTGGTC +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHRLETR*QARHLV
Trigger: GACCAGGTGTCTGGCCTGCCACCGTGTCTCAAGGCG...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCACAGGGCCGGAAGTTGTaGGACCACTGGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSVTALASDNPSSTRHPPQGRKL*DHWERQ
Trigger: CTGCCTCTCCCAGTGGTCCCACAACTTCCGGCCCTG...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCCAGGGCCGGAAGTTGTaGGACCACTGGGAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCQGRKL*DHWERQ
Trigger: CTGCCTCTCCCAGTGGTCCCACAACTTCCGGCCCTG...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCGCTGTGCCACGTCACTaGCAGTGCGGCGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVAVPRH*QCGVWL
Trigger: CAGCCACACGCCGCACTGCCAGTGACGTGGCACAGC...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCGCTGTGCCACGTCACTaGCAGTGCGGCGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSAVPRH*QCGVWL
Trigger: CAGCCACACGCCGCACTGCCAGTGACGTGGCACAGC...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGACTGGGGCTGGCCCGTaGAGGTCAGGCTCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: FWSLLVPTPCGRFCPGPQTGAGP*RSGSSA
Trigger: GGCTGAAGAGCCTGACCTCCACGGGCCAGCCCCAGT...CTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCCAGGTTGGTGGGAACTaGGGCTGGCCCGTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLQVGGN*GWPVEV
Trigger: GACCTCCACGGGCCAGCCCCAGTTCCCACCAACCTG...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCCGGAAAGGTGCAGGTTaGTGGGAACTGGGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCRKGAG*WELGLA
Trigger: GGCCAGCCCCAGTTCCCACCAACCTGCACCTTTCCG...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCGGCAATGGGTATAGGTaGTCGCCAGCAGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: ASSFPHPVAGFAQVLSHCGNGYR*SPAAPA
Trigger: GGCTGGAGCTGCTGGCGACCACCTATACCCATTGCC...GCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCGCCGCACACCTGTCCTaGGCTCGTGGTCCCACTGCA +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLAAHLS*ARGPTA
Trigger: TGCAGTGGGACCACGAGCCCAGGACAGGTGTGCGGC...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GGCCCGTGGTACGCTTCAGAGTGCGGTATTCCCGGTAGAGCGCTGCGTGGGCGAGGGCTCAGGGAGCTGTaGAGGCTCATCACTGACTTT +
Preference number: 4 (lower is better)
Translates to: GPWYASECGIPGRALRGRGLREL*RLITDF
Trigger: AAAGTCAGTGATGAGCCTCCACAGCTCCCTGAGCCC...TCGCCCACGCAGCGCTCTACCGGGAATACCGCACTCTGAAGCGTACCACGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR CCA 90 bp TTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTAGGGAGCCCAGCCGCTaGCTCAGGGATGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: FGASSFPHPVAGFAQVLSREPSR*LRDACR
Trigger: TCTGCAGGCATCCCTGAGCCAGCGGCTGGGCTCCCT...ACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCACGACCTCCAGACCCTaGGACCCAGGCTGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLTTSRP*DPGCVQ
Trigger: CTGCACGCAGCCTGGGTCCCAGGGTCTGGAGGTCGT...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTACGACCTCCAGACCCTaGGACCCAGGCTGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: FGASSFPHPVAGFAQVLSTTSRP*DPGCVQ
Trigger: CTGCACGCAGCCTGGGTCCCAGGGTCTGGAGGTCGT...ACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCCCTCGGCTGTGGTTTTaGGGGCACGACCTCCAGACC +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCPRLWF*GHDLQT
Trigger: GGTCTGGAGGTCGTGCCCCCAAAACCACAGCCGAGG...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACCTCGGCTGTGGTTTTaGGGGCACGACCTCCAGACC +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTRPRLWF*GHDLQT
Trigger: GGTCTGGAGGTCGTGCCCCCAAAACCACAGCCGAGG...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGGTAGGCCTCGGCTGTaGTTTTGGGGGCACGACCTC +
Preference number: 4 (lower is better)
Translates to: EPPRSHTLWQVLPRSSVTGRPRL*FWGHDL
Trigger: GAGGTCGTGCCCCCAAAACCACAGCCGAGGCCTACC...AGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp AGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGGGTAGGCCTCGGCTGTaGTTTTGGGGGCACGACCTC +
Preference number: 4 (lower is better)
Translates to: SLLVPTPCGRFCPGPQSLGRPRL*FWGHDL
Trigger: GAGGTCGTGCCCCCAAAACCACAGCCGAGGCCTACC...CAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCGACCCTTCTGGGTCCTaGGGCTGCTTGGTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTADPSGS*GCLVAK
Trigger: CTTAGCCACCAAGCAGCCCCAGGACCCAGAAGGGTC...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCGACAGGCCCTGTACCTaGGGGCTTTGGGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCDRPCT*GLWGGC
Trigger: GCATCCACCCCAAAGCCCCCAGGTACAGGGCCTGTC...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCACCACCACCCGCAACTaGCCCTGCATGAAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: RSSVTALASDNPSSTRHPTTTRN*PCMKAR
Trigger: GCGAGCCTTCATGCAGGGCCAGTTGCGGGTGGTGGT...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCGTAGCTCTCGAAGCTTaGGGGCAGCCCCAGATGCAG +
Preference number: 4 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTAVALEA*GQPQMQ
Trigger: CTGCATCTGGGGCTGCCCCCAAGCTTCGAGAGCTAC...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTGGCTGCAGGAAGAGGTaGCAGTGGGCAGGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: SAFWSLLVPTPCGRFCPGGCRKR*QWAGCP
Trigger: CGGGCAGCCTGCCCACTGCCACCTCTTCCTGCAGCC...ACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGAGGAAGGCCAGCTCACTaGACTCCACAAGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTRGRPAH*TPQAPL
Trigger: CAGGGGTGCTTGTGGAGTTCAGTGAGCTGGCCTTCC...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCGGAAGGCCAGCTCACTaGACTCCACAAGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCGRPAH*TPQAPL
Trigger: CAGGGGTGCTTGTGGAGTTCAGTGAGCTGGCCTTCC...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCACTGGGCTGCCCAGTaGTCGAACTGCTCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RSSVTALASDNPSSTRHPHWAAQ*SNCSFR
Trigger: CCTGAACGAGCAGTTCGATCACTGGGCAGCCCAGTG...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCAGACAGGATCCGCATaGCTGCACGCTCCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVQTGSA*LHAPAQ
Trigger: CTGGGCAGGAGCGTGCAGTCATGCGGATCCTGTCTG...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCGACTTCTTGGAAGGCTaGAGCCTCTGGGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCDFLEG*SLWALG
Trigger: TCCCAGGGCCCAGAGGCTTCAGCCTTCCAAGAAGTC...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTTCAAGTCCCCCGGGCTaGGAAGGTGGAAGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: FGASSFPHPVAGFAQVLSSSPPG*EGGRPA
Trigger: AGCTGGCCTTCCACCTTCGCAGCCCGGGGGACTTGA...ACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGATGCGGGCCACAGCCCTaGTGGAGAACTTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTRCGPQP*WRTSPL
Trigger: CAGAGGAGAAGTTCTCCAGCAGGGCTGTGGCCCGCA...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GTTTTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCAGCAGGGGCTTCCGATaGCGTGGAAGATGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: VLPRSSVTALASDNPSSTSRGFR*RGRCGP
Trigger: TGGCCCGCATCTTCCACGGCATCGGAAGCCCCTGCT...GGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCCATCCCCCAATGCAGTaGAGTCAGCGGGCCACCTGC +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSHPPMQ*SQRATC
Trigger: GCAGGTGGCCCGCTGACTGCACTGCATTGGGGGATG...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCCCGACATCCCCCAATaGAGTGCAGTCAGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMPDIPQ*SAVSGP
Trigger: TGGCCCGCTGACTGCACTGCATTGGGGGATGTCGGG...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GTTTTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCCCGACATCCCCCAATaGAGTGCAGTCAGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: VLPRSSVTALASDNPSSTPDIPQ*SAVSGP
Trigger: TGGCCCGCTGACTGCACTGCATTGGGGGATGTCGGG...GGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCCCGACATCCCCCAATaGAGTGCAGTCAGCGGGCCA +
Preference number: 4 (lower is better)
Translates to: FGASSFPHPVAGFAQVLSPDIPQ*SAVSGP
Trigger: TGGCCCGCTGACTGCACTGCATTGGGGGATGTCGGG...ACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTGGGGTCCAGCTTGGCTaGTCTCCTGCTGGACCTGTG +
Preference number: 4 (lower is better)
Translates to: AFWSLLVPTPCGRFCPGPGVQLG*SPAGPV
Trigger: CACAGGTCCAGCAGGAGAGCAGCCAAGCTGGACCCC...AGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GTTTTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCGGGCTGAGGTGGCTGTaGCTGTACAGGTTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: VLPRSSVTALASDNPSSTGLRWL*LYRFPW
Trigger: CCAGGGGAACCTGTACAGGCACAGCCACCTCAGCCC...GGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCGGTTCGATGGGCTGCTaGAGGGCTGAGGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLGSMGC*RAEVAV
Trigger: CACAGCCACCTCAGCCCTGCAGCAGCCCATCGAACC...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp AGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGGCTTCCATGCCTGCTTaGGGAGGAGCCTGCTACGGA +
Preference number: 4 (lower is better)
Translates to: SLLVPTPCGRFCPGPQSLASMPA*GGACYG
Trigger: TCCGTAGCAGGCTCCTCCGCAAGCAGGCATGGAAGC...CAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCTGTGTCTTCCTCACTTaGTGGCCGGGGACACTGGGC +
Preference number: 4 (lower is better)
Translates to: RSSVTALASDNPSSTRHPCVFLT*WPGTLG
Trigger: GCCCAGTGTCCCCGGCCAGCAAGTGAGGAAGACACA...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCTGTGTCTTCCTCACTTaGTGGCCGGGGACACTGGGC +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCCVFLT*WPGTLG
Trigger: GCCCAGTGTCCCCGGCCAGCAAGTGAGGAAGACACA...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp AGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGATGACTGCACGCTCCTaGCCAGGGCGAAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SLLVPTPCGRFCPGPQSLMTARS*PGRKAW
Trigger: CCAAGCCTTTCGCCCTGGGCAGGAGCGTGCAGTCAT...CAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCCCGCCCCCACCAGTaGCTCAGGTGTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: FWSLLVPTPCGRFCPGPQSRPHQ*LRCQHQ
Trigger: CTGATGCTGACACCTGAGGCACTGGTGGGGGCGGGA...CTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GTTTTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCGCTCCCGAAGCACCTTaGAGACGCGCAGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: VLPRSSVTALASDNPSSTAPEAP*RRAGSR
Trigger: CCTGCTACCTGCGCGTCTGCAAGGTGCTTCGGGAGC...GGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATTCAGCCACAGCCAGGTaGTGTGCCACGTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHSATAR*CATSLA
Trigger: TGCCAGTGACGTGGCACAGCACCTGGCTGTGGCTGA...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTGGGTCCTCAGGCAGCTaGTGGGCCAAGCACACAGCC +
Preference number: 4 (lower is better)
Translates to: SAFWSLLVPTPCGRFCPGGSSGS*WAKHTA
Trigger: GGCTGTGTGCTTGGCCCAGCAGCTGCCTGAGGACCC...ACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCACTCCACGGAGCTGCTaGCTTGCCCTGGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLTPRSC*LALGPQ
Trigger: CTGAGGACCCAGGGCAAGGCAGCAGCTCCGTGGAGT...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TGGGGGCTCCCCACACGGATGCTGACTTCTTGGAAGGCTGAAGCCTCTGGGCCCTGGTACGCTTCAGAGTaGGGTATTCCCGGTAGAGCG +
Preference number: 4 (lower is better)
Translates to: WGLPTRMLTSWKAEASGPWYASE*GIPGRA
Trigger: CGCTCTACCGGGAATACCGCACTCTGAAGCGTACCA...GGGCCCAGAGGCTTCAGCCTTCCAAGAAGTCAGCATCCGTGTGGGGAGCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR GCA 90 bp TTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGAGGGATGCCTGCAGATaGTGGAGCCGGCCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: FWSLLVPTPCGRFCPGPQRDACR*WSRPGL
Trigger: AAGGCCAGGCCGGCTCCAGCATCTGCAGGCATCCCT...CTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGAGCCTAGATCAGGCCTaGAGGCTTTGGGGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMSLDQA*RLWGPP
Trigger: TGGGGGCCCCCAAAGCCTGCAGGCCTGATCTAGGCT...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACGGCGTGCACATGTCTaGGCAGCTCTCGCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTRRRAHV*AALAGL
Trigger: AAGACCTGCGAGAGCTGCGCAGACATGTGCACGCCG...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGATCCGTGCTGTCGGCGTaGACATGTCTGCGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTRSVLSA*TCLRSS
Trigger: AGAGCTGCGCAGACATGTGCACGCCGACAGCACGGA...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCTCCGTGCTGTCGGCGTaGACATGTCTGCGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCSVLSA*TCLRSS
Trigger: AGAGCTGCGCAGACATGTGCACGCCGACAGCACGGA...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCAGCCAGGAAGTCCGTaGTGTCGGCGTGCACATGTC +
Preference number: 4 (lower is better)
Translates to: RSSVTALASDNPSSTRHPQPGSP*CRRAHV
Trigger: GACATGTGCACGCCGACAGCACGGACTTCCTGGCTG...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGATCTGGGTCCTGGGGCTaGTTGGTGGCTAAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTRSGSWG*LVAKLL
Trigger: GAGCAGCTTAGCCACCAAGCAGCCCCAGGACCCAGA...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCCCCGCTCATGGCCCATaGAGACCCTTCTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLPAHGP*RPFWVL
Trigger: CAGGACCCAGAAGGGTCTGCATGGGCCATGAGCGGG...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCCCCGCTCATGGCCCATaGAGACCCTTCTGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSPAHGP*RPFWVL
Trigger: CAGGACCCAGAAGGGTCTGCATGGGCCATGAGCGGG...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTGGGGGCAGCCCCAGATaGAGCACAGCCCGCACATCT +
Preference number: 4 (lower is better)
Translates to: SAFWSLLVPTPCGRFCPGGGSPR*STARTS
Trigger: AGATGTGCGGGCTGTGCTGCATCTGGGGCTGCCCCC...ACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCCCGGGCTGCGAAGGTaGAAGGCCAGCTCACTGAAC +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVPGLRR*KASSLN
Trigger: GTTCAGTGAGCTGGCCTTCCACCTTCGCAGCCCGGG...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGCCCGGGCTGCGAAGGTaGAAGGCCAGCTCACTGAAC +
Preference number: 4 (lower is better)
Translates to: FWSLLVPTPCGRFCPGPQPGLRR*KASSLN
Trigger: GTTCAGTGAGCTGGCCTTCCACCTTCGCAGCCCGGG...CTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGGGACAGGAACTaGCGGATGTCGCAGCGGACC +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVLRDRN*RMSQRT
Trigger: GGTCCGCTGCGACATCCGCCAGTTCCTGTCCCTGAG...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCGGGCCACAGCCCTGCTaGAGAACTTCTCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSGPQPC*RTSPLA
Trigger: GGCCAGAGGAGAAGTTCTCCAGCAGGGCTGTGGCCC...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTGGGCTTCCGATGCCGTaGAAGATGCGGGCCACAGCC +
Preference number: 4 (lower is better)
Translates to: SAFWSLLVPTPCGRFCPGGLPMP*KMRATA
Trigger: GGCTGTGGCCCGCATCTTCCACGGCATCGGAAGCCC...ACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GAAGCTCAGGTGCAGGTATTTTCTCCAGAAGCGTCGGTCCTGCCCGTACACCTGGCAGGAGCTCTTCCGTaGCCAGGCCCACCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: EAQVQVFSPEASVLPVHLAGALP*PGPPGH
Trigger: ATGCCCTGGTGGGCCTGGCCACGGAAGAGCTCCTGC...CAGGTGTACGGGCAGGACCGACGCTTCTGGAGAAAATACCTGCACCTGAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS-3UTR CCA 90 bp ATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGCAGGAGCTCTTCCGTaGCCAGGCCCACCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: ILEPPRSHTLWQVLPRSSAGALP*PGPPGH
Trigger: ATGCCCTGGTGGGCCTGGCCACGGAAGAGCTCCTGC...TGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCGTTCCCACACCCTGTaGCAGGTTTTGCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHRSHTL*QVLPRS
Trigger: GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACG...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCCGTTCCCACACCCTGTaGCAGGTTTTGCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCRSHTL*QVLPRS
Trigger: GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACG...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp AGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCGTTCCCACACCCTGTaGCAGGTTTTGCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SLLVPTPCGRFCPGPQSLRSHTL*QVLPRS
Trigger: GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACG...CAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GCCGACTCACCAGGGATCAGAAGTTGTGATTCCTCTGAGCCTAGATCAGGCCTGCGCCGGCCTGGCCCGTaGTACGCTTCAGAGTGCGGT +
Preference number: 4 (lower is better)
Translates to: ADSPGIRSCDSSEPRSGLRRPGP*YASECG
Trigger: ACCGCACTCTGAAGCGTACCACGGGCCAGGCCGGCG...CAGGCCTGATCTAGGCTCAGAGGAATCACAACTTCTGATCCCTGGTGAGTCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR CCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTGGCGGCTCCGCCCTaGCGTAGACTGTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVLAAPP*RRLWTL
Trigger: AAGAGTCCACAGTCTACGCCAGGGCGGAGCCGCCAG...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCTGGCGGCTCCGCCCTaGCGTAGACTGTGGACTCTT +
Preference number: 4 (lower is better)
Translates to: FGASSFPHPVAGFAQVLSLAAPP*RRLWTL
Trigger: AAGAGTCCACAGTCTACGCCAGGGCGGAGCCGCCAG...ACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGGATGGGGGTCCAGCTTaGCTGCTCTCCTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMDGGPA*LLSCWT
Trigger: GGTCCAGCAGGAGAGCAGCCAAGCTGGACCCCCATC...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGGATGGGGGTCCAGCTTaGCTGCTCTCCTGCTGGACC +
Preference number: 4 (lower is better)
Translates to: FWSLLVPTPCGRFCPGPQDGGPA*LLSCWT
Trigger: GGTCCAGCAGGAGAGCAGCCAAGCTGGACCCCCATC...CTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCTGCAGGGCTGAGGTaGCTGTGCCTGTACAGGTTC +
Preference number: 4 (lower is better)
Translates to: EPPRSHTLWQVLPRSSVTAAGLR*LCLYRF
Trigger: GAACCTGTACAGGCACAGCCACCTCAGCCCTGCAGC...AGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGCGGTGGGGTCCAGGCTaGGCACCTCAGGTACAGGTT +
Preference number: 4 (lower is better)
Translates to: FWSLLVPTPCGRFCPGPQRWGPG*APQVQV
Trigger: AACCTGTACCTGAGGTGCCCAGCCTGGACCCCACCG...CTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCGCCTTGAGACACGGTaGCAGGCCAGACACCTGGTC +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVRLETR*QARHLV
Trigger: GACCAGGTGTCTGGCCTGCCACCGTGTCTCAAGGCG...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCAGGCAAAAGCAACTaGAGGCAGCTGTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: EPPRSHTLWQVLPRSSVTAGKSN*RQLCGW
Trigger: CCAGCCGCACAGCTGCCTCCAGTTGCTTTTGCCTGC...AGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCAAGTTGTGGGACCACTaGGAGAGGCAGTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTAKLWDH*ERQWAS
Trigger: TGAGGCCCACTGCCTCTCCCAGTGGTCCCACAACTT...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGAAAGGTGCAGGTTGGTaGGAACTGGGGCTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQKGAGW*ELGLAR
Trigger: ACGGGCCAGCCCCAGTTCCCACCAACCTGCACCTTT...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGCTCCAGCCAGTGGTGTaGGTGCAGCTCCAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQLQPVV*VQLQVA
Trigger: TGCTACCTGGAGCTGCACCCACACCACTGGCTGGAG...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCGGCAATGGGTATAGGTaGTCGCCAGCAGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RSSVTALASDNPSSTRHPGNGYR*SPAAPA
Trigger: GGCTGGAGCTGCTGGCGACCACCTATACCCATTGCC...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTGTCCTGGGCTCGTaGTCCCACTGCAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: SAFWSLLVPTPCGRFCPGPVLGS*SHCSWQ
Trigger: CTGCCAGCTGCAGTGGGACCACGAGCCCAGGACAGG...ACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGGGTCCTGGGGCTGCTTaGTGGCTAAGCTGCTCAGCC +
Preference number: 4 (lower is better)
Translates to: FWSLLVPTPCGRFCPGPQGPGAA*WLSCSA
Trigger: GGCTGAGCAGCTTAGCCACCAAGCAGCCCCAGGACC...CTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCGACCCTTCTGGGTCCTaGGGCTGCTTGGTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCDPSGS*GCLVAK
Trigger: CTTAGCCACCAAGCAGCCCCAGGACCCAGAAGGGTC...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCATGCAGACCCTTCTaGGTCCTGGGGCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHPCRPF*VLGLLG
Trigger: ACCAAGCAGCCCCAGGACCCAGAAGGGTCTGCATGG...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCGGGAGTGCCCGCTCATaGCCCATGCAGACCCTTCTG +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLGSARS*PMQTLL
Trigger: CAGAAGGGTCTGCATGGGCCATGAGCGGGCACTCCC...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCTCCCAAAGGCCACCGTaGCCACCACCACCCGCAACT +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVSQRPP*PPPPAT
Trigger: AGTTGCGGGTGGTGGTGGCCACGGTGGCCTTTGGGA...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
3UTR CAA 72 bp TTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTaGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: LEPPRSHTLWQV*PRSSVTALASD
Trigger: GTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp GGAAGTCACATATCTGGTCCTTCTCCTCAGCGGTCAAGTCCCCCGGGCTGCGAAGGAAGGCCAGCTCACTaGACTCCACAAGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: GSHISGPSPQRSSPPGCEGRPAH*TPQAPL
Trigger: CAGGGGTGCTTGTGGAGTTCAGTGAGCTGGCCTTCC...TTCGCAGCCCGGGGGACTTGACCGCTGAGGAGAAGGACCAGATATGTGACTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS-3UTR TCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGGGAAGGCCAGCTCACTaGACTCCACAAGCACCCCTG +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMGRPAH*TPQAPL
Trigger: CAGGGGTGCTTGTGGAGTTCAGTGAGCTGGCCTTCC...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCCTTTCAGATTGGCCTTaGGCCGCTGCCCGTAGTCCG +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSLSDWP*AAARSP
Trigger: CGGACTACGGGCAGCGGCTCAAGGCCAATCTGAAAG...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCAAGACTCCTTGGTTGTaGCTGTGGCACCACCACCCC +
Preference number: 4 (lower is better)
Translates to: RSSVTALASDNPSSTRHPKTPWL*LWHHHP
Trigger: GGGGTGGTGGTGCCACAGTCACAACCAAGGAGTCTT...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp TTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGCACTGGGCTGCCCAGTaGTCGAACTGCTCGTTCAGG +
Preference number: 4 (lower is better)
Translates to: FWSLLVPTPCGRFCPGPQHWAAQ*SNCSFR
Trigger: CCTGAACGAGCAGTTCGATCACTGGGCAGCCCAGTG...CTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCTGGAGTCCACCAGCTTaGCCATGTCAAACTCCACGG +
Preference number: 4 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTAWSPPA*PCQTPR
Trigger: CCGTGGAGTTTGACATGGTCAAGCTGGTGGACTCCA...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCGACTTCTTGGAAGGCTaGAGCCTCTGGGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLDFLEG*SLWALG
Trigger: TCCCAGGGCCCAGAGGCTTCAGCCTTCCAAGAAGTC...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTTGCGGGCCACAGCCCTaGTGGAGAACTTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FGASSFPHPVAGFAQVLSCGPQP*WRTSPL
Trigger: CAGAGGAGAAGTTCTCCAGCAGGGCTGTGGCCCGCA...ACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCTGCGGGCCACAGCCCTaGTGGAGAACTTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLCGPQP*WRTSPL
Trigger: CAGAGGAGAAGTTCTCCAGCAGGGCTGTGGCCCGCA...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGTGCGGGCCACAGCCCTaGTGGAGAACTTCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMCGPQP*WRTSPL
Trigger: CAGAGGAGAAGTTCTCCAGCAGGGCTGTGGCCCGCA...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCTGTGGCAGGTTTTaGCCAGGTCCTCAGTCACTG +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHPCGRF*PGPQSL
Trigger: CAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGG...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCACCCTGTGGCAGGTTTTaGCCAGGTCCTCAGTCACTG +
Preference number: 4 (lower is better)
Translates to: SSVTALASDNPSSTRHPPPCGRF*PGPQSL
Trigger: CAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGG...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCATGACTGCACGCTCCTaGCCAGGGCGAAAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLMTARS*PGRKAW
Trigger: CCAAGCCTTTCGCCCTGGGCAGGAGCGTGCAGTCAT...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATGTTGCTTCCTGGTCATaGCCGAGTGTATGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHVASWS*PSVCRP
Trigger: CGGCCTGCATACACTCGGGCATGACCAGGAAGCAAC...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGGTTGCTTCCTGGTCATaGCCGAGTGTATGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQVASWS*PSVCRP
Trigger: CGGCCTGCATACACTCGGGCATGACCAGGAAGCAAC...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp AGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCACGTGTACCTGGGCTaGCCGAATCTTCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SLLVPTPCGRFCPGPQSLHVYLG*PNLLQD
Trigger: GTCCTGCAGAAGATTCGGGCAGCCCAGGTACACGTG...CAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGCACGTGTACCTGGGCTaGCCGAATCTTCTGCAGGAC +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQHVYLG*PNLLQD
Trigger: GTCCTGCAGAAGATTCGGGCAGCCCAGGTACACGTG...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GTTTTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCTCAGCCACAGCCAGGTaGTGTGCCACGTCACTGGCA +
Preference number: 4 (lower is better)
Translates to: VLPRSSVTALASDNPSSTSATAR*CATSLA
Trigger: TGCCAGTGACGTGGCACAGCACCTGGCTGTGGCTGA...GGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGGTACGCTTCAGAGTaGGGTATTCCCGGTAGAGCG +
Preference number: 4 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHWYASE*GIPGRA
Trigger: CGCTCTACCGGGAATACCGCACTCTGAAGCGTACCA...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp ATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCATGGCTCAGGGATGCCTaGAGATGCTGGAGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: ILEPPRSHTLWQVLPRSSWLRDA*RCWSRP
Trigger: AGGCCGGCTCCAGCATCTGCAGGCATCCCTGAGCCA...TGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCTGGGTCCTGGGGCTaGTTGGTGGCTAAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSSGSWG*LVAKLL
Trigger: GAGCAGCTTAGCCACCAAGCAGCCCCAGGACCCAGA...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTTGGTCCTCCCAATCCTaGAGTCTGGCCTGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: SAFWSLLVPTPCGRFCPGWSSQS*SLACPG
Trigger: GCCAGGGCAGGCCAGACTCCAGGATTGGGAGGACCA...ACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATATGTCGCAGCGGACCTaGTCCTCCCAATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHMSQRT*SSQSWS
Trigger: ACTCCAGGATTGGGAGGACCAGGTCCGCTGCGACAT...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCATGTCGCAGCGGACCTaGTCCTCCCAATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: RSSVTALASDNPSSTRHPMSQRT*SSQSWS
Trigger: ACTCCAGGATTGGGAGGACCAGGTCCGCTGCGACAT...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAAGGCCCACCAGGGCATaGAAGCTCAGGTGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: SSVTALASDNPSSTRHPPRPTRA*KLRCRY
Trigger: ATACCTGCACCTGAGCTTCCATGCCCTGGTGGGCCT...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCGTTCCCACACCCTGTaGCAGGTTTTGCCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMRSHTL*QVLPRS
Trigger: GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACG...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GTTTTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCGCTGCAGGGCTGAGGTaGCTGTGCCTGTACAGGTTC +
Preference number: 4 (lower is better)
Translates to: VLPRSSVTALASDNPSSTAAGLR*LCLYRF
Trigger: GAACCTGTACAGGCACAGCCACCTCAGCCCTGCAGC...GGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GTTTTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCGCTGTAGAGCAGCGCTaGGAGCTGGTAGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: VLPRSSVTALASDNPSSTAVEQR*ELVAQG
Trigger: TCCCTGTGCTACCAGCTCCCAGCGCTGCTCTACAGC...GGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGGCTGTAGAGCAGCGCTaGGAGCTGGTAGCACAGGGA +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMAVEQR*ELVAQG
Trigger: TCCCTGTGCTACCAGCTCCCAGCGCTGCTCTACAGC...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp AGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGGGCAGGCCAGACACCTaGTCATCCATGAGTGACAGC +
Preference number: 4 (lower is better)
Translates to: SLLVPTPCGRFCPGPQSLGRPDT*SSMSDS
Trigger: GCTGTCACTCATGGATGACCAGGTGTCTGGCCTGCC...CAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGGCAGGCAAAAGCAACTaGAGGCAGCTGTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMAGKSN*RQLCGW
Trigger: CCAGCCGCACAGCTGCCTCCAGTTGCTTTTGCCTGC...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCAGCGTCAACAGTGCCTaGTCTGTGTCCCTGTCCATG +
Preference number: 4 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTASVNSA*SVSLSM
Trigger: CATGGACAGGGACACAGACCAGGCACTGTTGACGCT...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCTCCAGCCAGTGGTGTaGGTGCAGCTCCAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMLQPVV*VQLQVA
Trigger: TGCTACCTGGAGCTGCACCCACACCACTGGCTGGAG...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCCTCCAGCCAGTGGTGTaGGTGCAGCTCCAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLLQPVV*VQLQVA
Trigger: TGCTACCTGGAGCTGCACCCACACCACTGGCTGGAG...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GTTTTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCGGCAATGGGTATAGGTaGTCGCCAGCAGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VLPRSSVTALASDNPSSTGNGYR*SPAAPA
Trigger: GGCTGGAGCTGCTGGCGACCACCTATACCCATTGCC...GGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACGGGCTCAGGGAGCTGTaGAGGCTCATCACTGACTTT +
Preference number: 4 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHGLREL*RLITDF
Trigger: AAAGTCAGTGATGAGCCTCCACAGCTCCCTGAGCCC...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACGGCCCCCAGAAAATCTaGGACCTCACTGTGACATCG +
Preference number: 4 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHGPQKI*DLTVTS
Trigger: CGATGTCACAGTGAGGTCCCAGATTTTCTGGGGGCC...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTGGTGCAGGTGCAGGCTaGGAACACGCGCTGTACCAG +
Preference number: 4 (lower is better)
Translates to: SAFWSLLVPTPCGRFCPGGAGAG*EHALYQ
Trigger: CTGGTACAGCGCGTGTTCCCAGCCTGCACCTGCACC...ACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCCTGGGGCTGCTTGGTaGCTAAGCTGCTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: FGASSFPHPVAGFAQVLSPGAAW*LSCSAS
Trigger: AGAGGCTGAGCAGCTTAGCCACCAAGCAGCCCCAGG...ACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCCATGCAGACCCTTCTaGGTCCTGGGGCTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: FGASSFPHPVAGFAQVLSPCRPF*VLGLLG
Trigger: ACCAAGCAGCCCCAGGACCCAGAAGGGTCTGCATGG...ACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp ATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGGGAGTGCCCGCTCATaGCCCATGCAGACCCTTCTG +
Preference number: 4 (lower is better)
Translates to: ILEPPRSHTLWQVLPRSSGSARS*PMQTLL
Trigger: CAGAAGGGTCTGCATGGGCCATGAGCGGGCACTCCC...TGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCGCAGCACCAGCAGCGTaGAGATGCCAGACAGGATCC +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLAAPAA*RCQTGS
Trigger: GGATCCTGTCTGGCATCTCCACGCTGCTGGTGCTGC...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATTCCCCACACGGATGCTaGCTTCTTGGAAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHSPHGC*LLGRLK
Trigger: CTTCAGCCTTCCAAGAAGTCAGCATCCGTGTGGGGA...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAAGACTCCTTGGTTGTaGCTGTGGCACCACCACCCC +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLKTPWL*LWHHHP
Trigger: GGGGTGGTGGTGCCACAGTCACAACCAAGGAGTCTT...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTGGTCATCCATGAGTaGCAGCAGGGGAGAGACGAC +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVLVIHE*QQGRDD
Trigger: GTCGTCTCTCCCCTGCTGTCACTCATGGATGACCAG...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCTGGTCATCCATGAGTaGCAGCAGGGGAGAGACGAC +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMLVIHE*QQGRDD
Trigger: GTCGTCTCTCCCCTGCTGTCACTCATGGATGACCAG...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCTGGAGTCCACCAGCTTaGCCATGTCAAACTCCACGG +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCWSPPA*PCQTPR
Trigger: CCGTGGAGTTTGACATGGTCAAGCTGGTGGACTCCA...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCCCCTGTGGCAGGTTTTaGCCAGGTCCTCAGTCACTG +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSPCGRF*PGPQSL
Trigger: CAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGG...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCAGGACAGATTCCCGTTaGTTCCTGGTCATGCCCGAG +
Preference number: 4 (lower is better)
Translates to: RSSVTALASDNPSSTRHPRTDSR*FLVMPE
Trigger: CTCGGGCATGACCAGGAAGCAACGGGAATCTGTCCT...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATGCTGCCCGAATCTTCTaGAGGACAGATTCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHAARIF*RTDSRC
Trigger: GCAACGGGAATCTGTCCTGCAGAAGATTCGGGCAGC...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCATGGACACGGAAAGGTaGAGGTTGGTGGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCMDTER*RLVGTG
Trigger: CCCAGTTCCCACCAACCTGCACCTTTCCGTGTCCAT...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGGACACGGAAAGGTaGAGGTTGGTGGGAACTGGG +
Preference number: 4 (lower is better)
Translates to: SSVTALASDNPSSTRHPPMDTER*RLVGTG
Trigger: CCCAGTTCCCACCAACCTGCACCTTTCCGTGTCCAT...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTACCCGCAACTGGCCCTaGATGAAGGCTCGCTGTACC +
Preference number: 4 (lower is better)
Translates to: SAFWSLLVPTPCGRFCPGTRNWP*MKARCT
Trigger: GGTACAGCGAGCCTTCATGCAGGGCCAGTTGCGGGT...ACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCATGTCGCAGCGGACCTaGTCCTCCCAATCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSMSQRT*SSQSWS
Trigger: ACTCCAGGATTGGGAGGACCAGGTCCGCTGCGACAT...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTAGGCCCACCAGGGCATaGAAGCTCAGGTGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: FGASSFPHPVAGFAQVLSRPTRA*KLRCRY
Trigger: ATACCTGCACCTGAGCTTCCATGCCCTGGTGGGCCT...ACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACTGTACAGGTTCCCCTaGAGGGTCTTCCTCAACTGC +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTRLYRFP*RVFLNC
Trigger: GCAGTTGAGGAAGACCCTCCAGGGGAACCTGTACAG...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGGGCAGGCCAGACACCTaGTCATCCATGAGTGACAGC +
Preference number: 4 (lower is better)
Translates to: FWSLLVPTPCGRFCPGPQGRPDT*SSMSDS
Trigger: GCTGTCACTCATGGATGACCAGGTGTCTGGCCTGCC...CTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGAATCAGCACGTGTACCTaGGCTGCCCGAATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTRISTCT*AARIFC
Trigger: GCAGAAGATTCGGGCAGCCCAGGTACACGTGCTGAT...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCACTGGGAGAGGCAGTaGGCCTCATCAATGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMHWERQ*ASSMQA
Trigger: TGCCTGCATTGATGAGGCCCACTGCCTCTCCCAGTG...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCACTGGGAGAGGCAGTaGGCCTCATCAATGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AFWSLLVPTPCGRFCPGPHWERQ*ASSMQA
Trigger: TGCCTGCATTGATGAGGCCCACTGCCTCTCCCAGTG...AGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCAAGTTGTGGGACCACTaGGAGAGGCAGTGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSKLWDH*ERQWAS
Trigger: TGAGGCCCACTGCCTCTCCCAGTGGTCCCACAACTT...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp ATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAAAAGGTGCAGGTTGGTaGGAACTGGGGCTGGCCCGT +
Preference number: 4 (lower is better)
Translates to: ILEPPRSHTLWQVLPRSSKGAGW*ELGLAR
Trigger: ACGGGCCAGCCCCAGTTCCCACCAACCTGCACCTTT...TGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCCTGTGTCCCTGTCCATaGACACGGAAAGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TALASDNPSSTRHPPMQCLCPCP*TRKGAG
Trigger: ACCTGCACCTTTCCGTGTCCATGGACAGGGACACAG...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTGGGGCTGCTTGGTaGCTAAGCTGCTCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SAFWSLLVPTPCGRFCPGPGAAW*LSCSAS
Trigger: AGAGGCTGAGCAGCTTAGCCACCAAGCAGCCCCAGG...ACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGATACGGTAAGCTGTATTaGGAGTGCCCGCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: LPRSSVTALASDNPSSTRYGKLY*ECPLMA
Trigger: GGCCATGAGCGGGCACTCCCAATACAGCTTACCGTA...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTGTAGCTCTCGAAGCTTaGGGGCAGCCCCAGATGCAG +
Preference number: 4 (lower is better)
Translates to: SAFWSLLVPTPCGRFCPGVALEA*GQPQMQ
Trigger: CTGCATCTGGGGCTGCCCCCAAGCTTCGAGAGCTAC...ACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCTCCCCACACGGATGCTaGCTTCTTGGAAGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVSPHGC*LLGRLK
Trigger: CTTCAGCCTTCCAAGAAGTCAGCATCCGTGTGGGGA...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp GCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTTGGAGTCCACCAGCTTaGCCATGTCAAACTCCACGG +
Preference number: 4 (lower is better)
Translates to: AFWSLLVPTPCGRFCPGPWSPPA*PCQTPR
Trigger: CCGTGGAGTTTGACATGGTCAAGCTGGTGGACTCCA...AGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCCTGTGGCAGGTTTTaGCCAGGTCCTCAGTCACTG +
Preference number: 4 (lower is better)
Translates to: SAFWSLLVPTPCGRFCPGPCGRF*PGPQSL
Trigger: CAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGG...ACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCTTCTTCCGCCACTTCTaGTTCCATGCCTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLFFRHF*FHACLR
Trigger: CCGCAAGCAGGCATGGAAGCAGAAGTGGCGGAAGAA...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGTTCTTCCGCCACTTCTaGTTCCATGCCTGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMFFRHF*FHACLR
Trigger: CCGCAAGCAGGCATGGAAGCAGAAGTGGCGGAAGAA...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCAGGACAGATTCCCGTTaGTTCCTGGTCATGCCCGAG +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVRTDSR*FLVMPE
Trigger: CTCGGGCATGACCAGGAAGCAACGGGAATCTGTCCT...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCGCTGCCCGAATCTTCTaGAGGACAGATTCCCGTTGC +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVAARIF*RTDSRC
Trigger: GCAACGGGAATCTGTCCTGCAGAAGATTCGGGCAGC...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTGGTACGCTTCAGAGTaGGGTATTCCCGGTAGAGCG +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSWYASE*GIPGRA
Trigger: CGCTCTACCGGGAATACCGCACTCTGAAGCGTACCA...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTAGGCCCACCAGGGCATaGAAGCTCAGGTGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: SAFWSLLVPTPCGRFCPGRPTRA*KLRCRY
Trigger: ATACCTGCACCTGAGCTTCCATGCCCTGGTGGGCCT...ACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp ATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAAGGCCCACCAGGGCATaGAAGCTCAGGTGCAGGTAT +
Preference number: 4 (lower is better)
Translates to: ILEPPRSHTLWQVLPRSSRPTRA*KLRCRY
Trigger: ATACCTGCACCTGAGCTTCCATGCCCTGGTGGGCCT...TGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCCTGTACAGGTTCCCCTaGAGGGTCTTCCTCAACTGC +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLLYRFP*RVFLNC
Trigger: GCAGTTGAGGAAGACCCTCCAGGGGAACCTGTACAG...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTATTCCCGTTGCTTCCTaGTCATGCCCGAGTGTATGC +
Preference number: 4 (lower is better)
Translates to: EPPRSHTLWQVLPRSSVTIPVAS*SCPSVC
Trigger: GCATACACTCGGGCATGACCAGGAAGCAACGGGAAT...AGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCATCAGCACGTGTACCTaGGCTGCCCGAATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLISTCT*AARIFC
Trigger: GCAGAAGATTCGGGCAGCCCAGGTACACGTGCTGAT...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GTTTTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCTGTGTCCCTGTCCATaGACACGGAAAGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VLPRSSVTALASDNPSSTLCPCP*TRKGAG
Trigger: ACCTGCACCTTTCCGTGTCCATGGACAGGGACACAG...GGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGAGCGTCAACAGTGCCTaGTCTGTGTCCCTGTCCATG +
Preference number: 4 (lower is better)
Translates to: SVTALASDNPSSTRHPPMSVNSA*SVSLSM
Trigger: CATGGACAGGGACACAGACCAGGCACTGTTGACGCT...CATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCGGGCTCAGGGAGCTGTaGAGGCTCATCACTGACTTT +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVGLREL*RLITDF
Trigger: AAAGTCAGTGATGAGCCTCCACAGCTCCCTGAGCCC...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CAAGGACAGCCGACTCACCAGGGATCAGAAGTTGTGATTCCTCTGAGCCTAGATAGGGAGCCCAGCCGCTaGCTCAGGGATGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: QGQPTHQGSEVVIPLSLDREPSR*LRDACR
Trigger: TCTGCAGGCATCCCTGAGCCAGCGGCTGGGCTCCCT...ATCTAGGCTCAGAGGAATCACAACTTCTGATCCCTGGTGAGTCGGCTGTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR CCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCGGCCCCCAGAAAATCTaGGACCTCACTGTGACATCG +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSGPQKI*DLTVTS
Trigger: CGATGTCACAGTGAGGTCCCAGATTTTCTGGGGGCC...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCGTTTCTGCTTCATGTTaGGCCGTACGTAATTGCCCC +
Preference number: 4 (lower is better)
Translates to: RSSVTALASDNPSSTRHPVSASC*AVRNCP
Trigger: GGGGCAATTACGTACGGCTCAACATGAAGCAGAAAC...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATGTGGAGGCTCATCACTaGCTTTTTCTGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHVEAHH*LFLQRR
Trigger: CCTCCTTTGCAGAAAAAGTCAGTGATGAGCCTCCAC...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCGCATGGAAGCTCAGGTaGAGGTATTTTCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTAAWKLR*RYFLQK
Trigger: CTTCTGGAGAAAATACCTGCACCTGAGCTTCCATGC...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCGCATGGAAGCTCAGGTaGAGGTATTTTCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: ASSFPHPVAGFAQVLSHCAWKLR*RYFLQK
Trigger: CTTCTGGAGAAAATACCTGCACCTGAGCTTCCATGC...GCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATAGTGGGCCTCATCAATaGAGGCAAAAGCAACTGGAG +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHSGPHQ*RQKQLE
Trigger: CTCCAGTTGCTTTTGCCTGCATTGATGAGGCCCACT...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCATTCCCGTTGCTTCCTaGTCATGCCCGAGTGTATGC +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVIPVAS*SCPSVC
Trigger: GCATACACTCGGGCATGACCAGGAAGCAACGGGAAT...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp TCTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTTACGGTAAGCTGTATTaGGAGTGCCCGCTCATGGCC +
Preference number: 4 (lower is better)
Translates to: SAFWSLLVPTPCGRFCPGYGKLY*ECPLMA
Trigger: GGCCATGAGCGGGCACTCCCAATACAGCTTACCGTA...ACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp GTTTTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCGTTTCTGCTTCATGTTaGGCCGTACGTAATTGCCCC +
Preference number: 4 (lower is better)
Translates to: VLPRSSVTALASDNPSSTVSASC*AVRNCP
Trigger: GGGGCAATTACGTACGGCTCAACATGAAGCAGAAAC...GGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp GCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCATGGAATCGAGGTTTTaGAAACGTTTGCCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASSFPHPVAGFAQVLSHCMESRF*KRLPCS
Trigger: GCTGCAAGGCAAACGTTTTCAAAACCTCGATTCCAT...GCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCGTGGAGGCTCATCACTaGCTTTTTCTGCAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVVEAHH*LFLQRR
Trigger: CCTCCTTTGCAGAAAAAGTCAGTGATGAGCCTCCAC...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCAGTGGGCCTCATCAATaGAGGCAAAAGCAACTGGAG +
Preference number: 4 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSSGPHQ*RQKQLE
Trigger: CTCCAGTTGCTTTTGCCTGCATTGATGAGGCCCACT...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR TCA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATATGGAATCGAGGTTTTaGAAACGTTTGCCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PRSSVTALASDNPSSTRHMESRF*KRLPCS
Trigger: GCTGCAAGGCAAACGTTTTCAAAACCTCGATTCCAT...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTGCATGGAAGCTCAGGTaGAGGTATTTTCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: FGASSFPHPVAGFAQVLSAWKLR*RYFLQK
Trigger: CTTCTGGAGAAAATACCTGCACCTGAGCTTCCATGC...ACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp GCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTGCATGGAAGCTCAGGTaGAGGTATTTTCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: AFWSLLVPTPCGRFCPGPAWKLR*RYFLQK
Trigger: CTTCTGGAGAAAATACCTGCACCTGAGCTTCCATGC...AGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTTTTATTCTGCATTTTaGAGCCTCCTCGTTCCCACA +
Preference number: 4 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHFYSAF*SLLVPT
Trigger: TGTGGGAACGAGGAGGCTCCAAAATGCAGAATAAAA...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCGGTTTTGAAAACGTTTaGCTTGCAGCAGCGTCAACA +
Preference number: 4 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLGFENV*LAAAST
Trigger: TGTTGACGCTGCTGCAAGGCAAACGTTTTCAAAACC...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp TTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGGGTTTTGAAAACGTTTaGCTTGCAGCAGCGTCAACA +
Preference number: 4 (lower is better)
Translates to: FWSLLVPTPCGRFCPGPQGFENV*LAAAST
Trigger: TGTTGACGCTGCTGCAAGGCAAACGTTTTCAAAACC...CTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR GCA 90 bp CTGGGAGCCAGCACCAGGACCAAGGACAGCCGACTCACCAGGGATCAGAAGTTGATCACTGACTTTTTCTaGAGGGTGCCTTTCAGATTG +
Preference number: 4 (lower is better)
Translates to: LGASTRTKDSRLTRDQKLITDFF*RVPFRL
Trigger: CAATCTGAAAGGCACCCTGCAGAAAAAGTCAGTGAT...CAACTTCTGATCCCTGGTGAGTCGGCTGTCCTTGGTCCTGGTGCTGGCTCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR CCA 90 bp GTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTTTTATTCTGCATTTTaGAGCCTCCTCGTTCCCACA +
Preference number: 4 (lower is better)
Translates to: VTALASDNPSSTRHPPMQFYSAF*SLLVPT
Trigger: TGTGGGAACGAGGAGGCTCCAAAATGCAGAATAAAA...CTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CCA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCTTTTATTCTGCATTTTaGAGCCTCCTCGTTCCCACA +
Preference number: 4 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVFYSAF*SLLVPT
Trigger: TGTGGGAACGAGGAGGCTCCAAAATGCAGAATAAAA...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS GCA 90 bp TCCGGCGCCGCCTCCACGTCGTCCTGGCTCGGTCGCCGCCCGCGCTaGCGTCGGAACGCGCGCTCCCACGCCTGCAGCCGCTCCCGCACG +
Preference number: 5 (lower is better)
Translates to: SGAASTSSWLGRRPR*RRNARSHACSRSRT
Trigger: CGTGCGGGAGCGGCTGCAGGCGTGGGAGCGCGCGTTCCGACGGCAGCGCGGGCGGCGACCGAGCCAGGACGACGTGGAGGCGGCGCCGGA
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617875.6
CDS CCA 90 bp GCTCCCACGCCTGCAGCCGCTCCCGCACGTCCCGCAGCCGCTCCATaGCGCGCGCGCCCGCCCGGCCTCCGCGCTTGCGATCGTCCAGCG +
Preference number: 5 (lower is better)
Translates to: APTPAAAPARPAAAP*RARPPGLRACDRPA
Trigger: CGCTGGACGATCGCAAGCGCGGAGGCCGGGCGGGCGCGCGCGCCATGGAGCGGCTGCGGGACGTGCGGGAGCGGCTGCAGGCGTGGGAGC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS GCA 90 bp AGCTGCGGAGCCCGCCGCCGGCCTGGCCCGTGGTACGCTTCAGAGTaGGGTATTCCCGGTAGAGCGCGCGGGTCTCCTCCGGCGCCGCCT +
Preference number: 5 (lower is better)
Translates to: SCGARRRPGPWYASE*GIPGRARGSPPAPP
Trigger: AGGCGGCGCCGGAGGAGACCCGCGCGCTCTACCGGGAATACCGCACTCTGAAGCGTACCACGGGCCAGGCCGGCGGCGGGCTCCGCAGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS TCA 90 bp GGCCCAGGGCTGGTCCGGCCTGCAGGGTGCCTTTCAGATTGGCCTTaGGCCGCTGCCCGTAGTCCGGCACCGAGCCCTGGCGGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: GPGLVRPAGCLSDWP*AAARSPAPSPGGSA
Trigger: GGCGGAGCCGCCAGGGCTCGGTGCCGGACTACGGGCAGCGGCTCAAGGCCAATCTGAAAGGCACCCTGCAGGCCGGACCAGCCCTGGGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS CCA 90 bp CGGGGAGCGACTCGGAGCTGCGGAGCCCGCCGCCGGCCTGGCCCGTaGTACGCTTCAGAGTGCGGTATTCCCGGTAGAGCGCGCGGGTCT +
Preference number: 5 (lower is better)
Translates to: RGATRSCGARRRPGP*YASECGIPGRARGS
Trigger: AGACCCGCGCGCTCTACCGGGAATACCGCACTCTGAAGCGTACCACGGGCCAGGCCGGCGGCGGGCTCCGCAGCTCCGAGTCGCTCCCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS CCA 90 bp GTCACGCCCGGCCCGGCCCACGGCCTGCACGTAGCTCTCGAAGCTTaGGGGCAGCCCCAGATGCAGCACAGCCCGCACATCTGGCCGGTC +
Preference number: 5 (lower is better)
Translates to: VTPGPAHGLHVALEA*GQPQMQHSPHIWPV
Trigger: GACCGGCCAGATGTGCGGGCTGTGCTGCATCTGGGGCTGCCCCCAAGCTTCGAGAGCTACGTGCAGGCCGTGGGCCGGGCCGGGCGTGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS GCA 90 bp GCCTCTCCCCACCCACGGCCCCTTCCTGCTCCGAGGGCGGCCTGGTaGAGGTGCAGGTGCAGGCTGGGAACACGCGCTGTACCAGCCTCT +
Preference number: 5 (lower is better)
Translates to: ASPHPRPLPAPRAAW*RCRCRLGTRAVPAS
Trigger: AGAGGCTGGTACAGCGCGTGTTCCCAGCCTGCACCTGCACCTGCACCAGGCCGCCCTCGGAGCAGGAAGGGGCCGTGGGTGGGGAGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS TCA 90 bp AGGCTGAAGCCTCTGGGCCCTGCAGGGTGCCTTTCAGATTGGCCTTaGGCCGCTGCCCGTAGTCCGGCACCGAGCCCTGGCGGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: RLKPLGPAGCLSDWP*AAARSPAPSPGGSA
Trigger: GGCGGAGCCGCCAGGGCTCGGTGCCGGACTACGGGCAGCGGCTCAAGGCCAATCTGAAAGGCACCCTGCAGGGCCCAGAGGCTTCAGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524998.1
CDS TCA 90 bp CTGCCTGCCCACTCCTCACCTGCAGGGTGCCTTTCAGATTGGCCTTaGGCCGCTGCCCGTAGTCCGGCACCGAGCCCTGGCGGCTCCGCC +
Preference number: 5 (lower is better)
Translates to: LPAHSSPAGCLSDWP*AAARSPAPSPGGSA
Trigger: GGCGGAGCCGCCAGGGCTCGGTGCCGGACTACGGGCAGCGGCTCAAGGCCAATCTGAAAGGCACCCTGCAGGTGAGGAGTGGGCAGGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534270.1
CDS TCA 90 bp TCCCAAAGGCCACCGTGGCCACCACCACCCGCAACTGGCCCTGCATaGAGGCTCGCTGTACCCGCCGCCGTTCCCGGCTGCACATGCCCG +
Preference number: 5 (lower is better)
Translates to: SQRPPWPPPPATGPA*RLAVPAAVPGCTCP
Trigger: CGGGCATGTGCAGCCGGGAACGGCGGCGGGTACAGCGAGCCTTCATGCAGGGCCAGTTGCGGGTGGTGGTGGCCACGGTGGCCTTTGGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS GCA 90 bp CCCCACCCACGGCCCCTTCCTGCTCCGAGGGCGGCCTGGTGCAGGTaGAGGTGCAGGCTGGGAACACGCGCTGTACCAGCCTCTTCACAG +
Preference number: 5 (lower is better)
Translates to: PHPRPLPAPRAAWCR*RCRLGTRAVPASSQ
Trigger: CTGTGAAGAGGCTGGTACAGCGCGTGTTCCCAGCCTGCACCTGCACCTGCACCAGGCCGCCCTCGGAGCAGGAAGGGGCCGTGGGTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CCA 90 bp GACCTGGTCCTCCCAATCCTGGAGTGCACTCACTCTGGCCTGCCCTaGCTCGGGGCCCTGTGCGTCCTCCATGCCTCCCGGCTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: DLVLPILECTHSGLP*LGALCVLHASRLLP
Trigger: GGGCAGGAGCCGGGAGGCATGGAGGACGCACAGGGCCCCGAGCCAGGGCAGGCCAGAGTGAGTGCACTCCAGGATTGGGAGGACCAGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531875.2
CDS CCA 90 bp TCCAGCCCCATCCCAAAGGCCACCGTGGCCACCACCACCCGCAACTaGCCCTGCATGAAGGCTCGCTGTACCCGCCGCCGTTCCCGGCTG +
Preference number: 5 (lower is better)
Translates to: SSPIPKATVATTTRN*PCMKARCTRRRSRL
Trigger: CAGCCGGGAACGGCGGCGGGTACAGCGAGCCTTCATGCAGGGCCAGTTGCGGGTGGTGGTGGCCACGGTGGCCTTTGGGATGGGGCTGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp CGGGGAGCGACTCGGAGCTGCGGAGCCCGCCGCCGGCCTGGCCCGTGGTACGCTGTAGACTGTGGACTCTaGGTCGCAGCCCGATTCAGA +
Preference number: 5 (lower is better)
Translates to: RGATRSCGARRRPGPWYAVDCGL*VAARFR
Trigger: TCTGAATCGGGCTGCGACCAAGAGTCCACAGTCTAC...AGCGTACCACGGGCCAGGCCGGCGGCGGGCTCCGCAGCTCCGAGTCGCTCCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS GCA 90 bp GCCTCTTCACAGCCAGGAAGTCCGTGCTGTCGGCGTGCACATGTCTaGGCAGCTCTCGCAGGTCTTCGCCCCGCCGCCGTTCCCGGCTGC +
Preference number: 5 (lower is better)
Translates to: ASSQPGSPCCRRAHV*AALAGLRPAAVPGC
Trigger: GCAGCCGGGAACGGCGGCGGGGCGAAGACCTGCGAGAGCTGCGCAGACATGTGCACGCCGACAGCACGGACTTCCTGGCTGTGAAGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534626.6
CDS TCA 90 bp CAGCGGTCAAGTCCCCCGGGCTGCGAAGGTGGAAGGCCAGCTCACTaGACTCCACAAGCACCCCTGTCCCACGCCGCACACCTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: QRSSPPGCEGGRPAH*TPQAPLSHAAHLWA
Trigger: GGCCCACAGGTGTGCGGCGTGGGACAGGGGTGCTTGTGGAGTTCAGTGAGCTGGCCTTCCACCTTCGCAGCCCGGGGGACTTGACCGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301323.7
CDS GCA 90 bp AGGGACTTGCCGGCACCAGACAGGATCCGCATGACTGCACGCTCCTaGCCAGGGCGAAAGGCTTGGTGCCCCAGCTGCTCCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RDLPAPDRIRMTARS*PGRKAWCPSCSRAW
Trigger: CCAGGCCCTGGAGCAGCTGGGGCACCAAGCCTTTCGCCCTGGGCAGGAGCGTGCAGTCATGCGGATCCTGTCTGGTGCCGGCAAGTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532846.2
CDS GCA 90 bp ACTGGGGCTGGCCCGTGGAGGTCAGGCTCTTCAGCCACAGCCAGGTaGTGTGCCACGTCACTGGCAGTGCGGCGTGTGGCTGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: TGAGPWRSGSSATAR*CATSLAVRRVAVAV
Trigger: CACAGCCACAGCCACACGCCGCACTGCCAGTGACGTGGCACAGCACCTGGCTGTGGCTGAAGAGCCTGACCTCCACGGGCCAGCCCCAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS GCA 90 bp GTGGTTTTGGGGGCACGACCTCCAGACCCTGGGACCCAGGCTGCGTaGAGGCAGGTTCGGAGGAGCGCAGCGATCCGCTCTGTGTCCTCG +
Preference number: 5 (lower is better)
Translates to: VVLGARPPDPGTQAA*RQVRRSAAIRSVSS
Trigger: CGAGGACACAGAGCGGATCGCTGCGCTCCTCCGAACCTGCCTGCACGCAGCCTGGGTCCCAGGGTCTGGAGGTCGTGCCCCCAAAACCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CCA 90 bp GACGACCAACGTGAGGCAGGGGCTGCGCCGGCTGTAGAGCAGCGCTaGGAGCTGGTAGCACAGGGACTTGCCGGCACCAGACAGGATCCG +
Preference number: 5 (lower is better)
Translates to: DDQREAGAAPAVEQR*ELVAQGLAGTRQDP
Trigger: CGGATCCTGTCTGGTGCCGGCAAGTCCCTGTGCTACCAGCTCCCAGCGCTGCTCTACAGCCGGCGCAGCCCCTGCCTCACGTTGGTCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532846.2
CDS CCA 90 bp GACGACCAACGTGAGGCAGGGGCTGCGCCGGCTGTAGAGCAGCGCTaGGAGCTGGTAGCACAGGGACTTGCCGGCACCTGTAGGCAGCAC +
Preference number: 5 (lower is better)
Translates to: DDQREAGAAPAVEQR*ELVAQGLAGTCRQH
Trigger: GTGCTGCCTACAGGTGCCGGCAAGTCCCTGTGCTACCAGCTCCCAGCGCTGCTCTACAGCCGGCGCAGCCCCTGCCTCACGTTGGTCGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS TCA 90 bp CAGCGGTCAAGTCCCCCGGGCTGCGAAGGTGGAAGGCCAGCTCACTaGACTCCACAAGCACCCCTGTCCCACGCCGCACACCTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: QRSSPPGCEGGRPAH*TPQAPLSHAAHLSW
Trigger: CCAGGACAGGTGTGCGGCGTGGGACAGGGGTGCTTGTGGAGTTCAGTGAGCTGGCCTTCCACCTTCGCAGCCCGGGGGACTTGACCGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS GCA 90 bp CGCTGTACCAGCCTCTTCACAGCCAGGAAGTCCGTGCTGTCGGCGTaGACATGTCTGCGCAGCTCTCGCAGGTCTTCGCCCCGCCGCCGT +
Preference number: 5 (lower is better)
Translates to: RCTSLFTARKSVLSA*TCLRSSRRSSPRRR
Trigger: ACGGCGGCGGGGCGAAGACCTGCGAGAGCTGCGCAGACATGTGCACGCCGACAGCACGGACTTCCTGGCTGTGAAGAGGCTGGTACAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534626.6
CDS GCA 90 bp AGCAGCGTGGAGATGCCAGACAGGATCCGCATGACTGCACGCTCCTaGCCAGGGCGAAAGGCTTGGTGCCCCAGCTGCTCCAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SSVEMPDRIRMTARS*PGRKAWCPSCSRAW
Trigger: CCAGGCCCTGGAGCAGCTGGGGCACCAAGCCTTTCGCCCTGGGCAGGAGCGTGCAGTCATGCGGATCCTGTCTGGCATCTCCACGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS CCA 90 bp CCCTTCCTGCTCCGAGGGCGGCCTGGTGCAGGTGCAGGTGCAGGCTaGGAACACGCGCTGTACCAGCCTCTTCACAGCCAGGAAGTCCGT +
Preference number: 5 (lower is better)
Translates to: PFLLRGRPGAGAGAG*EHALYQPLHSQEVR
Trigger: ACGGACTTCCTGGCTGTGAAGAGGCTGGTACAGCGCGTGTTCCCAGCCTGCACCTGCACCTGCACCAGGCCGCCCTCGGAGCAGGAAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp GCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCGGCCGAGCAGGTCCTaGAGCCTGGTGCTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: ASSFPHPVAGFAQVLSHCRPSRS*SLVLRS
Trigger: GGAGCGCAGCACCAGGCTCAAGGACCTGCTCGGCCG...GCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS TCA 90 bp TCTCGCCTCCACTGCTGCTGGGCTGGGGGCTCCCCACACGGATGCTaGCTTCTTGGAAGGCTGAAGCCTCTGGGCCCTGCAGGGTGCCTT +
Preference number: 5 (lower is better)
Translates to: SRLHCCWAGGSPHGC*LLGRLKPLGPAGCL
Trigger: AAGGCACCCTGCAGGGCCCAGAGGCTTCAGCCTTCCAAGAAGTCAGCATCCGTGTGGGGAGCCCCCAGCCCAGCAGCAGTGGAGGCGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524998.1
CDS GCA 90 bp GCAGTGGGCCTCATCAATGCAGGCAAAAGCAACTGGAGGCAGCTGTaGGGCTGGAGGGAGGCCTCCCGCCCCCACCAGTGCCTCAGGTGT +
Preference number: 5 (lower is better)
Translates to: AVGLINAGKSNWRQL*GWREASRPHQCLRC
Trigger: ACACCTGAGGCACTGGTGGGGGCGGGAGGCCTCCCTCCAGCCGCACAGCTGCCTCCAGTTGCTTTTGCCTGCATTGATGAGGCCCACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS GCA 90 bp CGCTGTACCAGCCTCTTCACAGCCAGGAAGTCCGTGCTGTCGGCGTaGACATGTCTGCGCAGCTCTCGCAGGTCTTCGCCCTGGGGCTGC +
Preference number: 5 (lower is better)
Translates to: RCTSLFTARKSVLSA*TCLRSSRRSSPWGC
Trigger: GCAGCCCCAGGGCGAAGACCTGCGAGAGCTGCGCAGACATGTGCACGCCGACAGCACGGACTTCCTGGCTGTGAAGAGGCTGGTACAGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCCGGCCGAGCAGGTCCTaGAGCCTGGTGCTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: TALASDNPSSTRHPPMQCRPSRS*SLVLRS
Trigger: GGAGCGCAGCACCAGGCTCAAGGACCTGCTCGGCCG...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCGGCCGAGCAGGTCCTaGAGCCTGGTGCTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: RSSVTALASDNPSSTRHPRPSRS*SLVLRS
Trigger: GGAGCGCAGCACCAGGCTCAAGGACCTGCTCGGCCG...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp GCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCGCCCGGCCTCCGCGCTaGCGATCGTCCAGCGAATCT +
Preference number: 5 (lower is better)
Translates to: ASSFPHPVAGFAQVLSHCARPPR*RSSSES
Trigger: AGATTCGCTGGACGATCGCAAGCGCGGAGGCCGGGC...GCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS CCA 90 bp GGCCTCATCAATGCAGGCAAAAGCAACTGGAGGCAGCTGTGCGGCTaGAGGGAGGCCTCCCGCCCCCACCAGTGCCTCAGGTGTCAGCAT +
Preference number: 5 (lower is better)
Translates to: GLINAGKSNWRQLCG*REASRPHQCLRCQH
Trigger: ATGCTGACACCTGAGGCACTGGTGGGGGCGGGAGGCCTCCCTCCAGCCGCACAGCTGCCTCCAGTTGCTTTTGCCTGCATTGATGAGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CCA 90 bp CCTGTCCATGGACACGGAAAGGTGCAGGTTGGTGGGAACTGGGGCTaGCCCGTGGAGGTCAGGCTCTTCAGCCACAGCCAGGTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: PVHGHGKVQVGGNWG*PVEVRLFSHSQVLC
Trigger: GCACAGCACCTGGCTGTGGCTGAAGAGCCTGACCTCCACGGGCCAGCCCCAGTTCCCACCAACCTGCACCTTTCCGTGTCCATGGACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCAGGGCGAAAGGCTaGGTGCCCCAGCTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: PRSSVTALASDNPSSTRHPRAKG*VPQLLQ
Trigger: CTGGAGCAGCTGGGGCACCAAGCCTTTCGCCCTGGG...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCACACGGAGCTGCTGCCTaGCCCTGGGTCCTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: SSVTALASDNPSSTRHPPHGAAA*PWVLRQ
Trigger: CTGCCTGAGGACCCAGGGCAAGGCAGCAGCTCCGTG...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp ACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAATGCAGTGCCACGGAGCTGCTGCCTaGCCCTGGGTCCTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: TALASDNPSSTRHPPMQCHGAAA*PWVLRQ
Trigger: CTGCCTGAGGACCCAGGGCAAGGCAGCAGCTCCGTG...GCACTGCATTGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS GCA 90 bp CTGGGAACACGCGCTGTACCAGCCTCTTCACAGCCAGGAAGTCCGTaGTGTCGGCGTGCACATGTCTGCGCAGCTCTCGCAGGTCTTCGC +
Preference number: 5 (lower is better)
Translates to: LGTRAVPASSQPGSP*CRRAHVCAALAGLR
Trigger: GCGAAGACCTGCGAGAGCTGCGCAGACATGTGCACGCCGACAGCACGGACTTCCTGGCTGTGAAGAGGCTGGTACAGCGCGTGTTCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CCA 90 bp ATCTGGTCCTTCTCCTCAGCGGTCAAGTCCCCCGGGCTGCGAAGGTaGAAGGCCAGCTCACTGAACTCCACAAGCACCCCTGTCCCACGC +
Preference number: 5 (lower is better)
Translates to: IWSFSSAVKSPGLRR*KASSLNSTSTPVPR
Trigger: GCGTGGGACAGGGGTGCTTGTGGAGTTCAGTGAGCTGGCCTTCCACCTTCGCAGCCCGGGGGACTTGACCGCTGAGGAGAAGGACCAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS CCA 90 bp GAGTCCGTGGTACCTGGGGTTCGATGGGCTGCTGCAGGGCTGAGGTaGCTGTGCCTGTACAGGTTCCCCTGGAGGGTCTTCCTCAACTGC +
Preference number: 5 (lower is better)
Translates to: ESVVPGVRWAAAGLR*LCLYRFPWRVFLNC
Trigger: GCAGTTGAGGAAGACCCTCCAGGGGAACCTGTACAGGCACAGCCACCTCAGCCCTGCAGCAGCCCATCGAACCCCAGGTACCACGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524998.1
ENST00000617875.6
ENST00000621189.4
CDS CCA 90 bp ATGGACACGGAAAGGTGCAGGTTGGTGGGAACTGGGGCTGGCCCGTaGAGGTCAGGCTCTTCAGCCACAGCCAGGTGCTGTGCCACGTCA +
Preference number: 5 (lower is better)
Translates to: MDTERCRLVGTGAGP*RSGSSATARCCATS
Trigger: TGACGTGGCACAGCACCTGGCTGTGGCTGAAGAGCCTGACCTCCACGGGCCAGCCCCAGTTCCCACCAACCTGCACCTTTCCGTGTCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CCA 90 bp TGTGTCCCTGTCCATGGACACGGAAAGGTGCAGGTTGGTGGGAACTaGGGCTGGCCCGTGGAGGTCAGGCTCTTCAGCCACAGCCAGGTG +
Preference number: 5 (lower is better)
Translates to: CVPVHGHGKVQVGGN*GWPVEVRLFSHSQV
Trigger: CACCTGGCTGTGGCTGAAGAGCCTGACCTCCACGGGCCAGCCCCAGTTCCCACCAACCTGCACCTTTCCGTGTCCATGGACAGGGACACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp ATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCACGGCCGAGCAGGTCCTaGAGCCTGGTGCTGCGCTCC +
Preference number: 5 (lower is better)
Translates to: ILEPPRSHTLWQVLPRSSRPSRS*SLVLRS
Trigger: GGAGCGCAGCACCAGGCTCAAGGACCTGCTCGGCCG...TGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp CTGGGAGCCAGCACCAGGACCAAGGACAGCCGACTCACCAGGGATCAGAAGTTGCGATGGGGGTCCAGCTaGGCTGCTCTCCTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: LGASTRTKDSRLTRDQKLRWGSS*AALLLD
Trigger: GTCCAGCAGGAGAGCAGCCAAGCTGGACCCCCATCG...CAACTTCTGATCCCTGGTGAGTCGGCTGTCCTTGGTCCTGGTGCTGGCTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR CAA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCTTCCATGCCTGCTaGCGGAGGAGCCTGCTACGG +
Preference number: 5 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHCFHAC*RRSLLR
Trigger: CCGTAGCAGGCTCCTCCGCAAGCAGGCATGGAAGCA...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCTGTATGCAGGCCGCCTaGAGACACGGTGGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTACMQAA*RHGGRP
Trigger: TGGCCTGCCACCGTGTCTCAAGGCGGCCTGCATACA...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp GCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCACGGAAAGGTGCAGGTaGGTGGGAACTGGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: ASSFPHPVAGFAQVLSHCTERCR*VGTGAG
Trigger: GCCAGCCCCAGTTCCCACCAACCTGCACCTTTCCGT...GCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp CTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCACGGAGCTGCTGCCTaGCCCTGGGTCCTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LHFGASSFPHPVAGFAQVHGAAA*PWVLRQ
Trigger: CTGCCTGAGGACCCAGGGCAAGGCAGCAGCTCCGTG...GACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp TTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGAGGGTCCTGGGGCTGCTaGGTGGCTAAGCTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: LPRSSVTALASDNPSSTRGSWGC*VAKLLS
Trigger: GCTGAGCAGCTTAGCCACCAAGCAGCCCCAGGACCC...TCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp TTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGGCCCGGCCTCCGCGCTaGCGATCGTCCAGCGAATCT +
Preference number: 5 (lower is better)
Translates to: FWSLLVPTPCGRFCPGPQARPPR*RSSSES
Trigger: AGATTCGCTGGACGATCGCAAGCGCGGAGGCCGGGC...CTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS TCA 90 bp TGCTACGGAGTGCCCGGCCCCGCACGTAGTGTTTCTGCTTCATGTTaGGCCGTACGTAATTGCCCCTGTCATGGCGGGCCAGCCGAGGGA +
Preference number: 5 (lower is better)
Translates to: CYGVPGPARSVSASC*AVRNCPCHGGPAEG
Trigger: TCCCTCGGCTGGCCCGCCATGACAGGGGCAATTACGTACGGCTCAACATGAAGCAGAAACACTACGTGCGGGGCCGGGCACTCCGTAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524998.1
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp CCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATAGGGTGCCTTTCAGATaGGCCTTGAGCCGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: PRSSVTALASDNPSSTRHRVPFR*ALSRCP
Trigger: CGGGCAGCGGCTCAAGGCCAATCTGAAAGGCACCCT...ATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCCGATGGGGGTCCAGCTaGGCTGCTCTCCTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLRWGSS*AALLLD
Trigger: GTCCAGCAGGAGAGCAGCCAAGCTGGACCCCCATCG...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp GTTTTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGATGGGGGTCCAGCTaGGCTGCTCTCCTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: VLPRSSVTALASDNPSSTRWGSS*AALLLD
Trigger: GTCCAGCAGGAGAGCAGCCAAGCTGGACCCCCATCG...GGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp AGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCTGCTTCCATGCCTGCTaGCGGAGGAGCCTGCTACGG +
Preference number: 5 (lower is better)
Translates to: RSSVTALASDNPSSTRHPCFHAC*RRSLLR
Trigger: CCGTAGCAGGCTCCTCCGCAAGCAGGCATGGAAGCA...GGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp AGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCTGTGTCTTCCTCACTaGCTGGCCGGGGACACTGGG +
Preference number: 5 (lower is better)
Translates to: SLLVPTPCGRFCPGPQSLLCLPH*LAGDTG
Trigger: CCCAGTGTCCCCGGCCAGCAAGTGAGGAAGACACAG...CAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp ATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCACCCAGGGCGAAAGGCTaGGTGCCCCAGCTGCTCCAG +
Preference number: 5 (lower is better)
Translates to: ILEPPRSHTLWQVLPRSSPRAKG*VPQLLQ
Trigger: CTGGAGCAGCTGGGGCACCAAGCCTTTCGCCCTGGG...TGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp GAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTTGTATGCAGGCCGCCTaGAGACACGGTGGCAGGCCA +
Preference number: 5 (lower is better)
Translates to: EPPRSHTLWQVLPRSSVTCMQAA*RHGGRP
Trigger: TGGCCTGCCACCGTGTCTCAAGGCGGCCTGCATACA...AGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp CATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCGCCTCGGCTGTGGTTTaGGGGGCACGACCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: HFGASSFPHPVAGFAQVLASAVV*GARPPD
Trigger: GTCTGGAGGTCGTGCCCCCAAAACCACAGCCGAGGC...GAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS GCA 90 bp CCACTTCTGCTTCCATGCCTGCTTGCGGAGGAGCCTGCTACGGAGTaGCCGGCCCCGCACGTAGTGTTTCTGCTTCATGTTGAGCCGTAC +
Preference number: 5 (lower is better)
Translates to: PLLLPCLLAEEPATE*PAPHVVFLLHVEPY
Trigger: GTACGGCTCAACATGAAGCAGAAACACTACGTGCGGGGCCGGGCACTCCGTAGCAGGCTCCTCCGCAAGCAGGCATGGAAGCAGAAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524998.1
ENST00000617875.6
ENST00000621189.4
CDS CCA 90 bp ACGGCAATGGGTATAGGTGGTCGCCAGCAGCTCCAGCCAGTGGTGTaGGTGCAGCTCCAGGTAGCACAGCAAAGTCTCGATGGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: TAMGIGGRQQLQPVV*VQLQVAQQSLDGLL
Trigger: GAGGAGGCCATCGAGACTTTGCTGTGCTACCTGGAGCTGCACCCACACCACTGGCTGGAGCTGCTGGCGACCACCTATACCCATTGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp TGGGAGCCAGCACCAGGACCAAGGACAGCCGACTCACCAGGGATCAGAAGTTGTAGGGTGCCTTTCAGATaGGCCTTGAGCCGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: WEPAPGPRTADSPGIRSCRVPFR*ALSRCP
Trigger: CGGGCAGCGGCTCAAGGCCAATCTGAAAGGCACCCT...ACAACTTCTGATCCCTGGTGAGTCGGCTGTCCTTGGTCCTGGTGCTGGCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534538.1
CDS-3UTR CAA 90 bp TTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGAGGGTGCCTTTCAGATaGGCCTTGAGCCGCTGCCCG +
Preference number: 5 (lower is better)
Translates to: FWSLLVPTPCGRFCPGPQRVPFR*ALSRCP
Trigger: CGGGCAGCGGCTCAAGGCCAATCTGAAAGGCACCCT...CTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp GTTTTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCACGGAAAGGTGCAGGTaGGTGGGAACTGGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: VLPRSSVTALASDNPSSTTERCR*VGTGAG
Trigger: GCCAGCCCCAGTTCCCACCAACCTGCACCTTTCCGT...GGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp TCTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTGCCTCGGCTGTGGTTTaGGGGGCACGACCTCCAGAC +
Preference number: 5 (lower is better)
Translates to: SAFWSLLVPTPCGRFCPGASAVV*GARPPD
Trigger: GTCTGGAGGTCGTGCCCCCAAAACCACAGCCGAGGC...ACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp TCTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCTGTGTCTTCCTCACTaGCTGGCCGGGGACACTGGG +
Preference number: 5 (lower is better)
Translates to: SAFWSLLVPTPCGRFCPGLCLPH*LAGDTG
Trigger: CCCAGTGTCCCCGGCCAGCAAGTGAGGAAGACACAG...ACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS CCA 90 bp ATGTCCAAAGCCTGTACGGTAAGCTGTATTGGGAGTGCCCGCTCATaGCCCATGCAGACCCTTCTGGGTCCTGGGGCTGCTTGGTGGCTA +
Preference number: 5 (lower is better)
Translates to: MSKACTVSCIGSARS*PMQTLLGPGAAWWL
Trigger: TAGCCACCAAGCAGCCCCAGGACCCAGAAGGGTCTGCATGGGCCATGAGCGGGCACTCCCAATACAGCTTACCGTACAGGCTTTGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp GAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGTAGACTGTGGACTCTaGGTCGCAGCCCGATTCAGA +
Preference number: 5 (lower is better)
Translates to: EPPRSHTLWQVLPRSSVTVDCGL*VAARFR
Trigger: TCTGAATCGGGCTGCGACCAAGAGTCCACAGTCTAC...AGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp GCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCATGGAGTCCACCAGCTaGACCATGTCAAACTCCACG +
Preference number: 5 (lower is better)
Translates to: ASSFPHPVAGFAQVLSHCMESTS*TMSNST
Trigger: CGTGGAGTTTGACATGGTCAAGCTGGTGGACTCCAT...GCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp GTTTTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCGTAGACTGTGGACTCTaGGTCGCAGCCCGATTCAGA +
Preference number: 5 (lower is better)
Translates to: VLPRSSVTALASDNPSSTVDCGL*VAARFR
Trigger: TCTGAATCGGGCTGCGACCAAGAGTCCACAGTCTAC...GGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp GGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACAGGAAACAAGACTCCTaGGTTGTGACTGTGGCACCA +
Preference number: 5 (lower is better)
Translates to: GASSFPHPVAGFAQVLSHRKQDS*VVTVAP
Trigger: TGGTGCCACAGTCACAACCAAGGAGTCTTGTTTCCT...GTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp CCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTCACTGCCTTGAAAACGTTTGCCTaGCAGCAGCGTCAACAGTGC +
Preference number: 5 (lower is better)
Translates to: PPRSHTLWQVLPRSSVTALKTFA*QQRQQC
Trigger: GCACTGTTGACGCTGCTGCAAGGCAAACGTTTTCAA...GGCAGTGACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp TCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCCGACATCCCCCAAGGAAACAAGACTCCTaGGTTGTGACTGTGGCACCA +
Preference number: 5 (lower is better)
Translates to: SSVTALASDNPSSTRHPPRKQDS*VVTVAP
Trigger: TGGTGCCACAGTCACAACCAAGGAGTCTTGTTTCCT...TGGGGGATGTCGGGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp TTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTATGGAGTCCACCAGCTaGACCATGTCAAACTCCACG +
Preference number: 5 (lower is better)
Translates to: FGASSFPHPVAGFAQVLSMESTS*TMSNST
Trigger: CGTGGAGTTTGACATGGTCAAGCTGGTGGACTCCAT...ACTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp TTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAGTTGAAAACGTTTGCCTaGCAGCAGCGTCAACAGTGC +
Preference number: 5 (lower is better)
Translates to: FWSLLVPTPCGRFCPGPQLKTFA*QQRQQC
Trigger: GCACTGTTGACGCTGCTGCAAGGCAAACGTTTTCAA...CTGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp TCTGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTATGGAGTCCACCAGCTaGACCATGTCAAACTCCACG +
Preference number: 5 (lower is better)
Translates to: SAFWSLLVPTPCGRFCPGMESTS*TMSNST
Trigger: CGTGGAGTTTGACATGGTCAAGCTGGTGGACTCCAT...ACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp TGCATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTTTTTATTCTGCATTTaGGAGCCTCCTCGTTCCCAC +
Preference number: 5 (lower is better)
Translates to: CILEPPRSHTLWQVLPRSFLFCI*EPPRSH
Trigger: GTGGGAACGAGGAGGCTCCAAAATGCAGAATAAAAA...GGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000301323.7
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp GTTTTGCCCAGGTCCTCAGTCACTGCCCTAGCCTCTGACAACCCCAGCTCTACCAATGGAATCGAGGTTTaGAAAACGTTTGCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: VLPRSSVTALASDNPSSTNGIEV*KTFALQ
Trigger: CTGCAAGGCAAACGTTTTCAAAACCTCGATTCCATT...GGTAGAGCTGGGGTTGTCAGAGGCTAGGGCAGTGACTGAGGACCTGGGCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS-3UTR CAA 90 bp ATTTTGGAGCCTCCTCGTTCCCACACCCTGTGGCAGGTTTTGCCCAGGTCCTCAAATGGAATCGAGGTTTaGAAAACGTTTGCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: ILEPPRSHTLWQVLPRSSNGIEV*KTFALQ
Trigger: CTGCAAGGCAAACGTTTTCAAAACCTCGATTCCATT...TGAGGACCTGGGCAAAACCTGCCACAGGGTGTGGGAACGAGGAGGCTCCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS GCA 72 bp CGCCCGCGCTGCCGTCGGAACGCGCGCTCCCACGCCTaGAGCCGCTCCCGCACGTCCCGCAGCCGCTCCATG +
Preference number: 6 (lower is better)
Translates to: RPRCRRNARSHA*SRSRTSRSRSM
Trigger: CATGGAGCGGCTGCGGGACGTGCGGGAGCGGCTGCAGGCGTGGGAGCGCGCGTTCCGACGGCAGCGCGGGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS GCA 72 bp GCCTCCACGTCGTCCTGGCTCGGTCGCCGCCCGCGCTaGCGTCGGAACGCGCGCTCCCACGCCTGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: ASTSSWLGRRPR*RRNARSHACSR
Trigger: GCGGCTGCAGGCGTGGGAGCGCGCGTTCCGACGGCAGCGCGGGCGGCGACCGAGCCAGGACGACGTGGAGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000617875.6
CDS GCA 72 bp GCCCGCCGCCGGCCTGGCCCGTGGTACGCTTCAGAGTaGGGTATTCCCGGTAGAGCGCGCGGGTCTCCTCCG +
Preference number: 6 (lower is better)
Translates to: ARRRPGPWYASE*GIPGRARGSPP
Trigger: CGGAGGAGACCCGCGCGCTCTACCGGGAATACCGCACTCTGAAGCGTACCACGGGCCAGGCCGGCGGCGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS CAA 90 bp CGTCACGCCCGGCCCGGCCCACGGCCTGCACGTAGCTCTCGAAGCTaGGGGGCAGCCCCAGATGCAGCACAGCCCGCACATCTGGCCGGT +
Preference number: 6 (lower is better)
Translates to: RHARPGPRPARSSRS*GAAPDAAQPAHLAG
Trigger: ACCGGCCAGATGTGCGGGCTGTGCTGCATCTGGGGCTGCCCCCAAGCTTCGAGAGCTACGTGCAGGCCGTGGGCCGGGCCGGGCGTGACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS GCA 72 bp CCACGCCGCACACCTGTCCTGGGCTCGTGGTCCCACTaGAGCTGGCAGAGAGCCCGCCGCACAGAGGCCAGC +
Preference number: 6 (lower is better)
Translates to: PRRTPVLGSWSH*SWQRARRTEAS
Trigger: GCTGGCCTCTGTGCGGCGGGCTCTCTGCCAGCTGCAGTGGGACCACGAGCCCAGGACAGGTGTGCGGCGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS GCA 72 bp GCAGGTCTTCGCCCCGCCGCCGTTCCCGGCTGCACATaGCCGCGTGGTAGGCCTCGGCTGTGGTTTTGGGGG +
Preference number: 6 (lower is better)
Translates to: AGLRPAAVPGCT*PRGRPRLWFWG
Trigger: CCCCCAAAACCACAGCCGAGGCCTACCACGCGGGCATGTGCAGCCGGGAACGGCGGCGGGGCGAAGACCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534626.6
CDS GCA 72 bp GGTACGCTTCAGAGTGCGGTATTCCCGGTAGAGCGCTaGGTGGGCGAGCGGGAGGCGGGGTCAGGGTGGGGC +
Preference number: 6 (lower is better)
Translates to: GTLQSAVFPVER*VGEREAGSGWG
Trigger: GCCCCACCCTGACCCCGCCTCCCGCTCGCCCACGCAGCGCTCTACCGGGAATACCGCACTCTGAAGCGTACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534270.1
ENST00000534538.1
CDS GCA 72 bp GGGGCACGACCTCCAGACCCTGGGACCCAGGCTGCGTaGAGGCAGGTTCGGAGGAGCGCAGCGATCCGCTCT +
Preference number: 6 (lower is better)
Translates to: GARPPDPGTQAA*RQVRRSAAIRS
Trigger: AGAGCGGATCGCTGCGCTCCTCCGAACCTGCCTGCACGCAGCCTGGGTCCCAGGGTCTGGAGGTCGTGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS GCA 72 bp CACCCACGGCCCCTTCCTGCTCCGAGGGCGGCCTGGTaGAGGTGCAGGTGCAGGCTGGGAACACGCGCTGTA +
Preference number: 6 (lower is better)
Translates to: HPRPLPAPRAAW*RCRCRLGTRAV
Trigger: TACAGCGCGTGTTCCCAGCCTGCACCTGCACCTGCACCAGGCCGCCCTCGGAGCAGGAAGGGGCCGTGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS GCA 72 bp AGGCTCGCTGTACCCGCCGCCGTTCCCGGCTGCACATaGCCGCGTGGTAGGCCTCGGCTGTGGTTTTGGGGG +
Preference number: 6 (lower is better)
Translates to: RLAVPAAVPGCT*PRGRPRLWFWG
Trigger: CCCCCAAAACCACAGCCGAGGCCTACCACGCGGGCATGTGCAGCCGGGAACGGCGGCGGGTACAGCGAGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS CCA 72 bp CGCACACCTGTCCTGGGCTCGTGGTCCCACTGCAGCTaGCAGAGAGCCCGCCGCACAGAGGCCAGCTCCCAG +
Preference number: 6 (lower is better)
Translates to: RTPVLGSWSHCS*QRARRTEASSQ
Trigger: CTGGGAGCTGGCCTCTGTGCGGCGGGCTCTCTGCCAGCTGCAGTGGGACCACGAGCCCAGGACAGGTGTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS CCA 72 bp CCCGGCTGCACATGCCCGCGTGGTAGGCCTCGGCTGTaGTTTTGGGGGCACGACCTCCAGACCCTGGGACCC +
Preference number: 6 (lower is better)
Translates to: PGCTCPRGRPRL*FWGHDLQTLGP
Trigger: GGGTCCCAGGGTCTGGAGGTCGTGCCCCCAAAACCACAGCCGAGGCCTACCACGCGGGCATGTGCAGCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CCA 72 bp GGCCCGGCCCACGGCCTGCACGTAGCTCTCGAAGCTTaGGGGCAGCCCCAGATGCAGCACAGCCCGCACATC +
Preference number: 6 (lower is better)
Translates to: GPAHGLHVALEA*GQPQMQHSPHI
Trigger: GATGTGCGGGCTGTGCTGCATCTGGGGCTGCCCCCAAGCTTCGAGAGCTACGTGCAGGCCGTGGGCCGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS GCA 72 bp CTGTGCGGCTGGAGGGAGGCCTCCCGCCCCCACCAGTaGCTCAGGTGTCAGCATCAGCACGTGTACCTGGGC +
Preference number: 6 (lower is better)
Translates to: LCGWREASRPHQ*LRCQHQHVYLG
Trigger: GCCCAGGTACACGTGCTGATGCTGACACCTGAGGCACTGGTGGGGGCGGGAGGCCTCCCTCCAGCCGCACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS GCA 72 bp TTTGGGGGCACGACCTCCAGACCCTGGGACCCAGGCTaGGTGCAGGCAGGTTCGGAGGAGCGCAGCGATCCG +
Preference number: 6 (lower is better)
Translates to: FGGTTSRPWDPG*VQAGSEERSDP
Trigger: CGGATCGCTGCGCTCCTCCGAACCTGCCTGCACGCAGCCTGGGTCCCAGGGTCTGGAGGTCGTGCCCCCAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CCA 72 bp CTCCCAATCCTGGAGTGCACTCACTCTGGCCTGCCCTaGCTCGGGGCCCTGTGCGTCCTCCATGCCTCCCGG +
Preference number: 6 (lower is better)
Translates to: LPILECTHSGLP*LGALCVLHASR
Trigger: CCGGGAGGCATGGAGGACGCACAGGGCCCCGAGCCAGGGCAGGCCAGAGTGAGTGCACTCCAGGATTGGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531875.2
CDS GCA 72 bp CCGGCACCAGACAGGATCCGCATGACTGCACGCTCCTaGCCAGGGCGAAAGGCTTGGTGCCCCAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: PAPDRIRMTARS*PGRKAWCPSCS
Trigger: GGAGCAGCTGGGGCACCAAGCCTTTCGCCCTGGGCAGGAGCGTGCAGTCATGCGGATCCTGTCTGGTGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532846.2
CDS GCA 72 bp GGCCCGTGGAGGTCAGGCTCTTCAGCCACAGCCAGGTaGTGTGCCACGTCACTGGCAGTGCGGCGTGTGGCT +
Preference number: 6 (lower is better)
Translates to: GPWRSGSSATAR*CATSLAVRRVA
Trigger: AGCCACACGCCGCACTGCCAGTGACGTGGCACAGCACCTGGCTGTGGCTGAAGAGCCTGACCTCCACGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CCA 72 bp GGGCGAAAGGCTTGGTGCCCCAGCTGCTCCAGGGCCTaGAACACCTCAGCCGGCGTCTCTGCCAACTGCCCT +
Preference number: 6 (lower is better)
Translates to: GRKAWCPSCSRA*NTSAGVSANCP
Trigger: AGGGCAGTTGGCAGAGACGCCGGCTGAGGTGTTCCAGGCCCTGGAGCAGCTGGGGCACCAAGCCTTTCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532846.2
ENST00000617875.6
ENST00000621189.4
CDS CCA 72 bp CTCCGAGGGCGGCCTGGTGCAGGTGCAGGTGCAGGCTaGGAACACGCGCTGTACCAGCCTCTTCACAGCCAG +
Preference number: 6 (lower is better)
Translates to: LRGRPGAGAGAG*EHALYQPLHSQ
Trigger: CTGGCTGTGAAGAGGCTGGTACAGCGCGTGTTCCCAGCCTGCACCTGCACCTGCACCAGGCCGCCCTCGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CCA 72 bp ATCCCAAAGGCCACCGTGGCCACCACCACCCGCAACTaGCCCTGCATGAAGGCTCGCTGTACCCGCCGCCGT +
Preference number: 6 (lower is better)
Translates to: IPKATVATTTRN*PCMKARCTRRR
Trigger: ACGGCGGCGGGTACAGCGAGCCTTCATGCAGGGCCAGTTGCGGGTGGTGGTGGCCACGGTGGCCTTTGGGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS TCA 72 bp AGTCCCCCGGGCTGCGAAGGTGGAAGGCCAGCTCACTaGACTCCACAAGCACCCCTGTCCCACGCCGCACAC +
Preference number: 6 (lower is better)
Translates to: SPPGCEGGRPAH*TPQAPLSHAAH
Trigger: GTGTGCGGCGTGGGACAGGGGTGCTTGTGGAGTTCAGTGAGCTGGCCTTCCACCTTCGCAGCCCGGGGGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS TCA 72 bp CACTCCTCACCTGCAGGGTGCCTTTCAGATTGGCCTTaGGCCGCTGCCCGTAGTCCGGCACCGAGCCCTGGC +
Preference number: 6 (lower is better)
Translates to: HSSPAGCLSDWP*AAARSPAPSPG
Trigger: GCCAGGGCTCGGTGCCGGACTACGGGCAGCGGCTCAAGGCCAATCTGAAAGGCACCCTGCAGGTGAGGAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534270.1
CDS GCA 72 bp TGGTCCTCCCAATCCTGGAGTGCACTCACTCTGGCCTaGCCTGGCTCGGGGCCCTGTGCGTCCTCCATGCCT +
Preference number: 6 (lower is better)
Translates to: WSSQSWSALTLA*PGSGPCASSMP
Trigger: AGGCATGGAGGACGCACAGGGCCCCGAGCCAGGGCAGGCCAGAGTGAGTGCACTCCAGGATTGGGAGGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531875.2
CDS CCA 72 bp AATGCAGGCAAAAGCAACTGGAGGCAGCTGTGCGGCTaGAGGGAGGCCTCCCGCCCCCACCAGTGCCTCAGG +
Preference number: 6 (lower is better)
Translates to: NAGKSNWRQLCG*REASRPHQCLR
Trigger: CCTGAGGCACTGGTGGGGGCGGGAGGCCTCCCTCCAGCCGCACAGCTGCCTCCAGTTGCTTTTGCCTGCATT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS TCA 72 bp AAAGGGAGTCAAGGGCGAAGGCCCCGAGAAGCTCCCTaGAGACTCGTGCCCTGGTTGGCACAGGGGCCCGTG +
Preference number: 6 (lower is better)
Translates to: KGSQGRRPREAP*RLVPWLAQGPV
Trigger: CACGGGCCCCTGTGCCAACCAGGGCACGAGTCTTCAGGGAGCTTCTCGGGGCCTTCGCCCTTGACTCCCTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534270.1
CDS GCA 72 bp GAGATGCCAGACAGGATCCGCATGACTGCACGCTCCTaGCCAGGGCGAAAGGCTTGGTGCCCCAGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: EMPDRIRMTARS*PGRKAWCPSCS
Trigger: GGAGCAGCTGGGGCACCAAGCCTTTCGCCCTGGGCAGGAGCGTGCAGTCATGCGGATCCTGTCTGGCATCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000617875.6
ENST00000621189.4
CDS CCA 72 bp GGACACGGAAAGGTGCAGGTTGGTGGGAACTGGGGCTaGCCCGTGGAGGTCAGGCTCTTCAGCCACAGCCAG +
Preference number: 6 (lower is better)
Translates to: GHGKVQVGGNWG*PVEVRLFSHSQ
Trigger: CTGGCTGTGGCTGAAGAGCCTGACCTCCACGGGCCAGCCCCAGTTCCCACCAACCTGCACCTTTCCGTGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CCA 72 bp GGCCCCCAGGGCAGTTCAGACGGCAATGGGTATAGGTaGTCGCCAGCAGCTCCAGCCAGTGGTGTGGGTGCA +
Preference number: 6 (lower is better)
Translates to: GPQGSSDGNGYR*SPAAPASGVGA
Trigger: TGCACCCACACCACTGGCTGGAGCTGCTGGCGACCACCTATACCCATTGCCGTCTGAACTGCCCTGGGGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000531875.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS GCA 72 bp GCCACTTCTGCTTCCATGCCTGCTTGCGGAGGAGCCTaGTACGGAGTGCCCGGCCCCGCACGTAGTGTTTCT +
Preference number: 6 (lower is better)
Translates to: ATSASMPACGGA*YGVPGPARSVS
Trigger: AGAAACACTACGTGCGGGGCCGGGCACTCCGTAGCAGGCTCCTCCGCAAGCAGGCATGGAAGCAGAAGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524998.1
ENST00000617875.6
ENST00000621189.4
CDS GCA 72 bp CGCGCTGTACCAGCCTCTTCACAGCCAGGAAGTCCGTaGTGTCGGCGTGCACATGTCTGCGCAGCTCTCGCA +
Preference number: 6 (lower is better)
Translates to: RAVPASSQPGSP*CRRAHVCAALA
Trigger: TGCGAGAGCTGCGCAGACATGTGCACGCCGACAGCACGGACTTCCTGGCTGTGAAGAGGCTGGTACAGCGCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CCA 72 bp GAAAGGTGCAGGTTGGTGGGAACTGGGGCTGGCCCGTaGAGGTCAGGCTCTTCAGCCACAGCCAGGTGCTGT +
Preference number: 6 (lower is better)
Translates to: ERCRLVGTGAGP*RSGSSATARCC
Trigger: ACAGCACCTGGCTGTGGCTGAAGAGCCTGACCTCCACGGGCCAGCCCCAGTTCCCACCAACCTGCACCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CCA 72 bp GTCCATGGACACGGAAAGGTGCAGGTTGGTGGGAACTaGGGCTGGCCCGTGGAGGTCAGGCTCTTCAGCCAC +
Preference number: 6 (lower is better)
Translates to: VHGHGKVQVGGN*GWPVEVRLFSH
Trigger: GTGGCTGAAGAGCCTGACCTCCACGGGCCAGCCCCAGTTCCCACCAACCTGCACCTTTCCGTGTCCATGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CCA 72 bp CTGTGTCCCTGTCCATGGACACGGAAAGGTGCAGGTTaGTGGGAACTGGGGCTGGCCCGTGGAGGTCAGGCT +
Preference number: 6 (lower is better)
Translates to: LCPCPWTRKGAG*WELGLARGGQA
Trigger: AGCCTGACCTCCACGGGCCAGCCCCAGTTCCCACCAACCTGCACCTTTCCGTGTCCATGGACAGGGACACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CCA 72 bp CTCAGGGACAGGAACTGGCGGATGTCGCAGCGGACCTaGTCCTCCCAATCCTGGAGTGCACTCACTCTGGCC +
Preference number: 6 (lower is better)
Translates to: LRDRNWRMSQRT*SSQSWSALTLA
Trigger: GGCCAGAGTGAGTGCACTCCAGGATTGGGAGGACCAGGTCCGCTGCGACATCCGCCAGTTCCTGTCCCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531875.2
CDS TCA 72 bp ACACGGTGGCAGGCCAGACACCTGGTCATCCATGAGTaGCAGCAGGGGAGAGACGACCAACGTGAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: TRWQARHLVIHE*QQGRDDQREAG
Trigger: CCCTGCCTCACGTTGGTCGTCTCTCCCCTGCTGTCACTCATGGATGACCAGGTGTCTGGCCTGCCACCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532846.2
ENST00000617875.6
ENST00000621189.4
CDS TCA 72 bp GCTTCCTGGTCATGCCCGAGTGTATGCAGGCCGCCTTaGGACACGGTGGCAGGCCAGACACCTGGTCATCCA +
Preference number: 6 (lower is better)
Translates to: ASWSCPSVCRPP*DTVAGQTPGHP
Trigger: TGGATGACCAGGTGTCTGGCCTGCCACCGTGTCTCAAGGCGGCCTGCATACACTCGGGCATGACCAGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532846.2
ENST00000617875.6
ENST00000621189.4
CDS CCA 72 bp TTCTCCTCAGCGGTCAAGTCCCCCGGGCTGCGAAGGTaGAAGGCCAGCTCACTGAACTCCACAAGCACCCCT +
Preference number: 6 (lower is better)
Translates to: FSSAVKSPGLRR*KASSLNSTSTP
Trigger: AGGGGTGCTTGTGGAGTTCAGTGAGCTGGCCTTCCACCTTCGCAGCCCGGGGGACTTGACCGCTGAGGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000301323.7
ENST00000531875.2
ENST00000617875.6
ENST00000621189.4
CDS CCA 72 bp CTCAGGGACAGGAACTGGCGGATGTCGCAGCGGACCTaGTCCTCCCAATCCTGGAGCTGCCGGAAAGCATGT +
Preference number: 6 (lower is better)
Translates to: LRDRNWRMSQRT*SSQSWSCRKAC
Trigger: ACATGCTTTCCGGCAGCTCCAGGATTGGGAGGACCAGGTCCGCTGCGACATCCGCCAGTTCCTGTCCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529424.2
CDS CCA 72 bp TGTCCCTGTCCATGGACACGGAAAGGTGCAGGTTGGTaGGAACTGGGGCTGGCCCGTGGAGGTCAGGCTCTT +
Preference number: 6 (lower is better)
Translates to: CPCPWTRKGAGW*ELGLARGGQAL
Trigger: AAGAGCCTGACCTCCACGGGCCAGCCCCAGTTCCCACCAACCTGCACCTTTCCGTGTCCATGGACAGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CCA 72 bp GCCTGTACGGTAAGCTGTATTGGGAGTGCCCGCTCATaGCCCATGCAGACCCTTCTGGGTCCTGGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: ACTVSCIGSARS*PMQTLLGPGAA
Trigger: AGCAGCCCCAGGACCCAGAAGGGTCTGCATGGGCCATGAGCGGGCACTCCCAATACAGCTTACCGTACAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CAA 72 bp TGCTTCCTGGTCATGCCCGAGTGTATGCAGGCCGCCTaGAGACACGGTGGCAGGCCAGACACCTGGTCATCC +
Preference number: 6 (lower is better)
Translates to: CFLVMPECMQAA*RHGGRPDTWSS
Trigger: GGATGACCAGGTGTCTGGCCTGCCACCGTGTCTCAAGGCGGCCTGCATACACTCGGGCATGACCAGGAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532846.2
ENST00000617875.6
ENST00000621189.4
CDS TCA 72 bp GTGCCCGGCCCCGCACGTAGTGTTTCTGCTTCATGTTaGGCCGTACGTAATTGCCCCTGTCATGGCGGGCCA +
Preference number: 6 (lower is better)
Translates to: VPGPARSVSASC*AVRNCPCHGGP
Trigger: TGGCCCGCCATGACAGGGGCAATTACGTACGGCTCAACATGAAGCAGAAACACTACGTGCGGGGCCGGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000524998.1
ENST00000617875.6
ENST00000621189.4
CDS GCA 72 bp CTTCCATGCCTGCTTGCGGAGGAGCCTGCTACGGAGTaGCCGGCCCCGCACGTAGTGTTTCTGCTTCATGTT +
Preference number: 6 (lower is better)
Translates to: LPCLLAEEPATE*PAPHVVFLLHV
Trigger: AACATGAAGCAGAAACACTACGTGCGGGGCCGGGCACTCCGTAGCAGGCTCCTCCGCAAGCAGGCATGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524998.1
ENST00000617875.6
ENST00000621189.4
CDS GCA 72 bp TGGGCTGCCCGAATCTTCTGCAGGACAGATTCCCGTTaGTTCCTGGTCATGCCCGAGTGTATGCAGGCCGCC +
Preference number: 6 (lower is better)
Translates to: WAARIFCRTDSR*FLVMPECMQAA
Trigger: GGCGGCCTGCATACACTCGGGCATGACCAGGAAGCAACGGGAATCTGTCCTGCAGAAGATTCGGGCAGCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CCA 72 bp GCAGCGTCAACAGTGCCTGGTCTGTGTCCCTGTCCATaGACACGGAAAGGTGCAGGTTGGTGGGAACTGGGG +
Preference number: 6 (lower is better)
Translates to: AASTVPGLCPCP*TRKGAGWWELG
Trigger: CCCCAGTTCCCACCAACCTGCACCTTTCCGTGTCCATGGACAGGGACACAGACCAGGCACTGTTGACGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CAA 90 bp GATTCCCGTTGCTTCCTGGTCATGCCCGAGTGTATGCAGGCCGCCTaGAGACACGGTGGCAGGCCAGACACCTGGTCATCCATGAGTGAC +
Preference number: 6 (lower is better)
Translates to: DSRCFLVMPECMQAA*RHGGRPDTWSSMSD
Trigger: GTCACTCATGGATGACCAGGTGTCTGGCCTGCCACCGTGTCTCAAGGCGGCCTGCATACACTCGGGCATGACCAGGAAGCAACGGGAATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532846.2
ENST00000617875.6
ENST00000621189.4
CDS GCA 72 bp TGTGTCTTCCTCACTTGCTGGCCGGGGACACTGGGCTaGCCAGTGATCGAACTGCTCGTTCAGGAAACAAGA +
Preference number: 6 (lower is better)
Translates to: CVFLTCWPGTLG*PVIELLVQETR
Trigger: TCTTGTTTCCTGAACGAGCAGTTCGATCACTGGGCAGCCCAGTGTCCCCGGCCAGCAAGTGAGGAAGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532846.2
ENST00000617875.6
ENST00000621189.4
CDS CAA 90 bp TGTGTCCTCGCGCCGGTTGCAGTAAATGATAATGGAATCGAGGTTTaGAAAACGTTTGCCTTGCAGCAGCGTCAACAGTGCCTGGTCTGT +
Preference number: 6 (lower is better)
Translates to: CVLAPVAVNDNGIEV*KTFALQQRQQCLVC
Trigger: ACAGACCAGGCACTGTTGACGCTGCTGCAAGGCAAACGTTTTCAAAACCTCGATTCCATTATCATTTACTGCAACCGGCGCGAGGACACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CAA 72 bp GCGCCGGTTGCAGTAAATGATAATGGAATCGAGGTTTaGAAAACGTTTGCCTTGCAGCAGCGTCAACAGTGC +
Preference number: 6 (lower is better)
Translates to: APVAVNDNGIEV*KTFALQQRQQC
Trigger: GCACTGTTGACGCTGCTGCAAGGCAAACGTTTTCAAAACCTCGATTCCATTATCATTTACTGCAACCGGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4
CDS CAA 72 bp AATGATAATGGAATCGAGGTTTTGAAAACGTTTGCCTaGCAGCAGCGTCAACAGTGCCTGGTCTGTGTCCCT +
Preference number: 6 (lower is better)
Translates to: NDNGIEVLKTFA*QQRQQCLVCVP
Trigger: AGGGACACAGACCAGGCACTGTTGACGCTGCTGCAAGGCAAACGTTTTCAAAACCTCGATTCCATTATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000532846.2
ENST00000534626.6
ENST00000617875.6
ENST00000621189.4