Pregenerated sensors for RECQL (Homo sapiens)
Ensembl gene IDs: ENSG00000004700Ensembl transcript IDs: ENST00000314748.10, ENST00000396093.7, ENST00000421138.6, ENST00000444129.7, ENST00000536240.5, ENST00000536964.5, ENST00000539672.1, ENST00000542432.5
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAAGTGGGCGAAAGGAAGTaGTCCGCTACAGACCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SIFYVRPKTILLPMWLREVGERK*SATDRP Trigger: AGGCCGGTCTGTAGCGGATCACTTCCTTTCGCCCAC...TTCCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR GCA 90 bp | TTCTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATAAGACCGGCCTCGCCCTaGAGCAGGAAAGGGAAGGAT | + |
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Preference number: 4 (lower is better) Translates to: FFQCGSGKPKDWTSLIYIRPASP*SRKGKD Trigger: ATCCTTCCCTTTCCTGCTGCAGGGCGAGGCCGGTCT...TATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CCA 90 bp | AGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAATCCTCCGCCAATGTGTaGGCGAAAGGAAGTGATCCG | + |
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Preference number: 4 (lower is better) Translates to: SIFYVRPKTILLPMWLRESSANV*AKGSDP Trigger: CGGATCACTTCCTTTCGCCCACACATTGGCGGAGGA...TTCCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR TCA 90 bp | AGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAACTCAGAGCAGGGCAGTaGTTAACTTTCCGGTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SIFYVRPKTILLPMWLRELRAGQ*LTFRFL Trigger: GAGAAACCGGAAAGTTAATCACTGCCCTGCTCTGAG...TTCCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR TCA 90 bp | TTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGCAGGAAAGGGAAGGATaGAACAAAAAGCGCACACCC | + |
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Preference number: 4 (lower is better) Translates to: LAYFMCGPRQFFFQCGSGQEREG*NKKRTP Trigger: GGGTGTGCGCTTTTTGTTTCATCCTTCCCTTTCCTG...CCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR GCA 90 bp | AGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAACATGTCATCTCGACCTaGACGTCCACTCTCTTGGTA | + |
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Preference number: 4 (lower is better) Translates to: SIFYVRPKTILLPMWLREHVIST*TSTLLV Trigger: TACCAAGAGAGTGGACGTGCAGGTCGAGATGACATG...TTCCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR TCA 90 bp | TTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAAAATCTTCAGTGTTTaGGGGCTTCTGCCGAACCTC | + |
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Preference number: 4 (lower is better) Translates to: LAYFMCGPRQFFFQCGSGKIFSV*GLLPNL Trigger: GAGGTTCGGCAGAAGCCCTCAAACACTGAAGATTTT...CCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR TCA 90 bp | TTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAGCCCAGAACAGCTTTaGATGCAGCCCAACACAAAT | + |
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Preference number: 4 (lower is better) Translates to: LAYFMCGPRQFFFQCGSGSPEQL*MQPNTN Trigger: ATTTGTGTTGGGCTGCATTCAAAGCTGTTCTGGGCT...CCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR GCA 90 bp | AGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAAGGCATGGTAAGCACCTaGATGAATTCCCAGATTCTG | + |
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Preference number: 4 (lower is better) Translates to: SIFYVRPKTILLPMWLREGMVST*MNSQIL Trigger: CAGAATCTGGGAATTCATGCAGGTGCTTACCATGCC...TTCCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CCA 90 bp | AGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAACTTCTGGCTCCAAATTaGCATGGTAAGCACCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: SIFYVRPKTILLPMWLRELLAPN*HGKHLH Trigger: ATGCAGGTGCTTACCATGCCAATTTGGAGCCAGAAG...TTCCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR TCA 90 bp | TTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGCCTTATAATCAGGTCTaGAATCATGTCCCCACTGAC | + |
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Preference number: 4 (lower is better) Translates to: LAYFMCGPRQFFFQCGSGPYNQV*NHVPTD Trigger: GTCAGTGGGGACATGATTTCAGACCTGATTATAAGG...CCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR TCA 90 bp | TGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTTAACTTAGAGACGATTCAGCCCTaGAAGAGTTCTGCGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: CGSGKPKDWTSLIYIFNLETIQP*KSSAWT Trigger: AGTCCACGCAGAACTCTTTCAGGGCTGAATCGTCTC...TAAGTTAAATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR GCA 90 bp | TGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTTAACTTAGGGAGCCACAACACCTaGTACTCTCAGTTTTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: CGSGKPKDWTSLIYIFNLGSHNT*YSQFCC Trigger: GCAGCAAAACTGAGAGTAGCAGGTGTTGTGGCTCCC...TAAGTTAAATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CCA 90 bp | TTCTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATACTGCATGGAAAAGAATaGGGAGATCAGAAGACCGGT | + |
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Preference number: 4 (lower is better) Translates to: FFQCGSGKPKDWTSLIYILHGKE*GDQKTG Trigger: ACCGGTCTTCTGATCTCCCCATTCTTTTCCATGCAG...TATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CCA 90 bp | TTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGCTAATAAACAGGCTTTaGTGGCCAATCCTCCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: LAYFMCGPRQFFFQCGSGLINRL*WPILLH Trigger: ATGCAGGAGGATTGGCCACCAAAGCCTGTTTATTAG...CCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CCA 90 bp | TGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTTAACTTACTTCACGAGGAAGTGTaGGAGCCACAACACCTGCTA | + |
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Preference number: 4 (lower is better) Translates to: CGSGKPKDWTSLIYIFNLLHEEV*EPQHLL Trigger: TAGCAGGTGTTGTGGCTCCCACACTTCCTCGTGAAG...TAAGTTAAATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR TCA 90 bp | TTCTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATAGTTGCCACTACTACCTaGATTTCATTGGCTGACCAT | + |
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Preference number: 4 (lower is better) Translates to: FFQCGSGKPKDWTSLIYIVATTT*ISLADH Trigger: ATGGTCAGCCAATGAAATTCAGGTAGTAGTGGCAAC...TATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR TCA 90 bp | TTCTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATACCTGCTTCAGGATCTTaGTTAGATCTCTGCAGTACT | + |
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Preference number: 4 (lower is better) Translates to: FFQCGSGKPKDWTSLIYIPASGS*LDLCST Trigger: AGTACTGCAGAGATCTAATCAAGATCCTGAAGCAGG...TATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR GCA 90 bp | TTCTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATAATCATATTCATTGCTTaGCCCGGCATCAGAATCCTC | + |
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Preference number: 4 (lower is better) Translates to: FFQCGSGKPKDWTSLIYIIIFIA*PGIRIL Trigger: GAGGATTCTGATGCCGGGGCAAGCAATGAATATGAT...TATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR GCA 90 bp | CTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTGATGCGTTAGGGAACTaGCGCTTTAAGATACCAAGT | + |
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Preference number: 4 (lower is better) Translates to: LPMWLREAKRLDILDLHIDALGN*RFKIPS Trigger: ACTTGGTATCTTAAAGCGGCAGTTCCCTAACGCATC...AATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR GCA 90 bp | TTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGCAAAACGTGATTTGTTaGAGTTGCAGTCAGCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: LAYFMCGPRQFFFQCGSGQNVIC*SCSQPN Trigger: ATTGGGCTGACTGCAACTGCAACAAATCACGTTTTG...CCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR GCA 90 bp | CTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTTACTCTCAGTTTTGCTaGACCCTTTCCCATCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: LPMWLREAKRLDILDLHIYSQFC*TLSHPR Trigger: TCTTGGATGGGAAAGGGTGCAGCAAAACTGAGAGTA...AATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CCA 90 bp | TTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGGGGAAGCCAAAAGATTaGACATCCCTGATCTACATA | + |
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Preference number: 4 (lower is better) Translates to: LAYFMCGPRQFFFQCGSGGKPKD*TSLIYI Trigger: TATGTAGATCAGGGATGTCCAATCTTTTGGCTTCCC...CCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR TCA 90 bp | TGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTTAACTTAGCATCCGTCAAAACGTaGTTTGTTGCAGTTGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: CGSGKPKDWTSLIYIFNLASVKT*FVAVAV Trigger: GACTGCAACTGCAACAAATCACGTTTTGACGGATGC...TAAGTTAAATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR TCA 90 bp | TTCTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATAACTTCATCAAAATGTTaGGCCATCAACACACGACGA | + |
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Preference number: 4 (lower is better) Translates to: FFQCGSGKPKDWTSLIYITSSKC*AINTRR Trigger: TCGTCGTGTGTTGATGGCTCAACATTTTGATGAAGT...TATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR TCA 90 bp | TGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTTAACTTAAAAAGCGCACACCCTTaGCCCTTCAAAGCTGTAACA | + |
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Preference number: 4 (lower is better) Translates to: CGSGKPKDWTSLIYIFNLKSAHP*PFKAVT Trigger: TGTTACAGCTTTGAAGGGTCAAGGGTGTGCGCTTTT...TAAGTTAAATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR GCA 90 bp | AGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAAAAGAATCATATTCATTaGTTGCCCCGGCATCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: SIFYVRPKTILLPMWLREKNHIH*LPRHQN Trigger: ATTCTGATGCCGGGGCAAGCAATGAATATGATTCTT...TTCCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR GCA 90 bp | AGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAAGTACAAAATACAGTCTaGTTTCATGTCATCTCGACC | + |
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Preference number: 4 (lower is better) Translates to: SIFYVRPKTILLPMWLREVQNTV*FHVIST Trigger: GGTCGAGATGACATGAAAGCAGACTGTATTTTGTAC...TTCCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR GCA 90 bp | CTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTCAGAACAGCTTTGAATaGAGCCCAACACAAATCTGT | + |
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Preference number: 4 (lower is better) Translates to: LPMWLREAKRLDILDLHIQNSFE*SPTQIC Trigger: ACAGATTTGTGTTGGGCTGCATTCAAAGCTGTTCTG...AATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CCA 90 bp | TGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTTAACTTAGCCAATCCTCCTGCATaGAAAAGAATGGGGAGATCA | + |
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Preference number: 4 (lower is better) Translates to: CGSGKPKDWTSLIYIFNLANPPA*KRMGRS Trigger: TGATCTCCCCATTCTTTTCCATGCAGGAGGATTGGC...TAAGTTAAATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CCA 90 bp | TTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAACAAACCTCACATCTaGCTTATCAATTCCCATACC | + |
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Preference number: 4 (lower is better) Translates to: LAYFMCGPRQFFFQCGSGNKPHI*LINSHT Trigger: GGTATGGGAATTGATAAGCCAGATGTGAGGTTTGTT...CCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR TCA 90 bp | TTCTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTTACCATTTCAGCATaGACCCATTTAACATGCTCC | + |
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Preference number: 4 (lower is better) Translates to: FFQCGSGKPKDWTSLIYIFTISA*THLTCS Trigger: GGAGCATGTTAAATGGGTTCATGCTGAAATGGTAAA...TATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR TCA 90 bp | AGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAATCAGTTTCAATGGAGTaGGTTTTTCATTCAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: SIFYVRPKTILLPMWLRESVSME*VFHSVP Trigger: AGGAACTGAATGAAAAACTCACTCCATTGAAACTGA...TTCCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR GCA 90 bp | TTCTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATAAATTCCCATACCAAATaGAACAGTTGCCACTACTAC | + |
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Preference number: 4 (lower is better) Translates to: FFQCGSGKPKDWTSLIYINSHTK*NSCHYY Trigger: GTAGTAGTGGCAACTGTTGCATTTGGTATGGGAATT...TATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR GCA 90 bp | AGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAAACACACGACGACATTTaGTTATGTTTTGACAGTATG | + |
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Preference number: 4 (lower is better) Translates to: SIFYVRPKTILLPMWLRETHDDI*LCFDSM Trigger: CATACTGTCAAAACATAAGCAAATGTCGTCGTGTGT...TTCCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR GCA 90 bp | AGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAATTAGCATATTTTATGTaGGGCCCAAGACAATTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SIFYVRPKTILLPMWLRELAYFM*GPRQFF Trigger: GAAGAATTGTCTTGGGCCGCACATAAAATATGCTAA...TTCCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CCA 90 bp | TTCTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATAGGGAAGCCAAAAGATTaGACATCCTTGATCTACATA | + |
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Preference number: 4 (lower is better) Translates to: FFQCGSGKPKDWTSLIYIGKPKD*TSLIYI Trigger: TATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCC...TATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR TCA 90 bp | TGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTTAACTTAATTCCAAGCGGCAGGTaGAGAATCATATTCATTGCT | + |
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Preference number: 4 (lower is better) Translates to: CGSGKPKDWTSLIYIFNLIPSGR*RIIFIA Trigger: AGCAATGAATATGATTCTTCACCTGCCGCTTGGAAT...TAAGTTAAATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR TCA 90 bp | TTCTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTAATAGTTTCAAGCTaGAGTGGTCTGAACTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: FFQCGSGKPKDWTSLIYILIVSS*SGLNFS Trigger: GGAAAAGTTCAGACCACTTCAGCTTGAAACTATTAA...TATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR TCA 90 bp | CTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTCTGAATTTCATTGGCTaGCCATTTTCTATGAACTGT | + |
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Preference number: 4 (lower is better) Translates to: LPMWLREAKRLDILDLHILNFIG*PFSMNC Trigger: ACAGTTCATAGAAAATGGTCAGCCAATGAAATTCAG...AATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR GCA 90 bp | TTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGGAATCCTCTAAACACTaGTTTATTTTCTTTGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: LAYFMCGPRQFFFQCGSGESSKH*FIFFVR Trigger: CCTGACAAAGAAAATAAAGCAGTGTTTAGAGGATTC...CCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR GCA 90 bp | TGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTTAACTTATTCAGTTCCTCTGCCTaGTTCAGGATCTTGATTAGA | + |
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Preference number: 4 (lower is better) Translates to: CGSGKPKDWTSLIYIFNLFSSSA*FRILIR Trigger: TCTAATCAAGATCCTGAAGCAGGCAGAGGAACTGAA...TAAGTTAAATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CCA 90 bp | CTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTCATAAGAGAGATCAATaGGCAAATGACGAGTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: LPMWLREAKRLDILDLHIHKRDQ*ANDECK Trigger: TTTACACTCGTCATTTGCCCATTGATCTCTCTTATG...AATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CCA 90 bp | TGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTTAACTTATGTGGTCTTATCTTCTaGCTCCAAATTGGCATGGTA | + |
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Preference number: 4 (lower is better) Translates to: CGSGKPKDWTSLIYIFNLCGLIF*LQIGMV Trigger: TACCATGCCAATTTGGAGCCAGAAGATAAGACCACA...TAAGTTAAATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CCA 90 bp | CTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTATTTTCTATGAACTGTaGTCTTATCTTCTGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LPMWLREAKRLDILDLHIIFYEL*SYLLAP Trigger: TGGAGCCAGAAGATAAGACCACAGTTCATAGAAAAT...AATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR GCA 90 bp | CTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTGTTCTTTCTTTCAAATaGACTGTCTTTACAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LPMWLREAKRLDILDLHIVLSFK*TVFTAV Trigger: AACTGCTGTAAAGACAGTGCATTTGAAAGAAAGAAC...AATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CCA 90 bp | CTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTATTTCTTTCAACAAATaGCAGCTGCTAATAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPMWLREAKRLDILDLHIISFNK*QLLINR Trigger: CCTGTTTATTAGCAGCTGCCATTTGTTGAAAGAAAT...AATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS TCA 90 bp | CAGATCTTTCCGCTACTCGGGAGTAAAATCTTCCCGCCAGCCAGCTaGGAGCATCCACCCTTCCGGGTCGGTCCGTTCAGCCAATCACAG | + |
|
Preference number: 5 (lower is better) Translates to: QIFPLLGSKIFPPAS*EHPPFRVGPFSQSQ Trigger: CTGTGATTGGCTGAACGGACCGACCCGGAAGGGTGGATGCTCTCAGCTGGCTGGCGGGAAGATTTTACTCCCGAGTAGCGGAAAGATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000314748.10 ENST00000396093.7 |
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| CDS TCA 90 bp | CAGGCGAACGTGCCCCTAAAGGCCCGAGTTCTCAGAGCAGGGCAGTaGTTAACTTTCCGGTTTCTCCTCCGCCAATGTGTGGGCGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QANVPLKARVLRAGQ*LTFRFLLRQCVGER Trigger: CCTTTCGCCCACACATTGGCGGAGGAGAAACCGGAAAGTTAATCACTGCCCTGCTCTGAGAACTCGGGCCTTTAGGGGCACGTTCGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000314748.10 ENST00000444129.7 ENST00000539672.1 |
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| CDS TCA 90 bp | TTAACTTTCCGGTTTCTCCTCCGCCAATGTGTGGGCGAAAGGAAGTaGTCCGCTACAGACCGGCCTCGCCCTGCAGCAGGAAAGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTFRFLLRQCVGERK*SATDRPRPAAGKGR Trigger: CCTTCCCTTTCCTGCTGCAGGGCGAGGCCGGTCTGTAGCGGATCACTTCCTTTCGCCCACACATTGGCGGAGGAGAAACCGGAAAGTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS TCA 90 bp | GCTGCTAATAAACAGGCTTTGGTGGCCAATCCTCTCTCCGGTGTTTaGCTGTCCGGTGTCCGACTGTCCTGTGTCCGACTCTCCGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: AANKQALVANPLSGV*LSGVRLSCVRLSDL Trigger: GAGATCGGAGAGTCGGACACAGGACAGTCGGACACCGGACAGTCAAACACCGGAGAGAGGATTGGCCACCAAAGCCTGTTTATTAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542432.5 |
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| CDS CCA 90 bp | CTAATAAACAGGCTTTGGTGGCCAATCCTCCTGCATGGAAAAGAATaGGGAGATCAGAAGACCGGTCAGCAGGCGAACGTGCCCCTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LINRLWWPILLHGKE*GDQKTGQQANVPLK Trigger: CTTTAGGGGCACGTTCGCCTGCTGACCGGTCTTCTGATCTCCCCATTCTTTTCCATGCAGGAGGATTGGCCACCAAAGCCTGTTTATTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000314748.10 ENST00000444129.7 ENST00000539672.1 |
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| CDS CCA 90 bp | ATGGCAGCTGCTAATAAACAGGCTTTGGTGGCCAATCCTCCTGCATaGAAAAGAATGGGGAGATCAGAAGACCGGTCAGCAGGCGAACGT | + |
|
Preference number: 5 (lower is better) Translates to: MAAANKQALVANPPA*KRMGRSEDRSAGER Trigger: ACGTTCGCCTGCTGACCGGTCTTCTGATCTCCCCATTCTTTTCCATGCAGGAGGATTGGCCACCAAAGCCTGTTTATTAGCAGCTGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000314748.10 ENST00000444129.7 ENST00000539672.1 |
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| CDS GCA 90 bp | ACGAGGAAGTGTGGGAGCCACAACACCTGCTACTCTCAGTTTTGCTaGACCCTTTCCCATCCAAGAATCAATCAGTTTCAATGGAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TRKCGSHNTCYSQFC*TLSHPRINQFQWSE Trigger: CTCACTCCATTGAAACTGATTGATTCTTGGATGGGAAAGGGTGCAGCAAAACTGAGAGTAGCAGGTGTTGTGGCTCCCACACTTCCTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421138.6 ENST00000444129.7 |
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| CDS GCA 90 bp | AATCTTCTCCAGATCTTCACGAGGAAGTGTGGGAGCCACAACACCTaGTACTCTCAGTTTTGCTGCACCCTTTCCCATCCAAGAATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: NLLQIFTRKCGSHNT*YSQFCCTLSHPRIN Trigger: ATTGATTCTTGGATGGGAAAGGGTGCAGCAAAACTGAGAGTAGCAGGTGTTGTGGCTCCCACACTTCCTCGTGAAGATCTGGAGAAGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421138.6 ENST00000444129.7 |
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| CDS CCA 90 bp | CAAATTTCTTTCAACAAATGGCAGCTGCTAATAAACAGGCTTTGGTaGCCAATCCTCCGAGAAGCCCGGTCTAACTCTCCGGTGTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: QISFNKWQLLINRLW*PILREARSNSPVFD Trigger: GTCAAACACCGGAGAGTTAGACCGGGCTTCTCGGAGGATTGGCCACCAAAGCCTGTTTATTAGCAGCTGCCATTTGTTGAAAGAAATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396093.7 |
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| CDS CCA 90 bp | CAAATTTCTTTCAACAAATGGCAGCTGCTAATAAACAGGCTTTGGTaGCCAATCCTCTCTCCGGTGTTTGACTGTCCGGTGTCCGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: QISFNKWQLLINRLW*PILSPVFDCPVSDC Trigger: ACAGTCGGACACCGGACAGTCAAACACCGGAGAGAGGATTGGCCACCAAAGCCTGTTTATTAGCAGCTGCCATTTGTTGAAAGAAATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542432.5 |
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| CDS CCA 90 bp | ATCCAAATTTCTTTCAACAAATGGCAGCTGCTAATAAACAGGCTTTaGTGGCCAATCCTCTCTCCGGTGTTTGACTGTCCGGTGTCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: IQISFNKWQLLINRL*WPILSPVFDCPVSD Trigger: GTCGGACACCGGACAGTCAAACACCGGAGAGAGGATTGGCCACCAAAGCCTGTTTATTAGCAGCTGCCATTTGTTGAAAGAAATTTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542432.5 |
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| CDS CCA 90 bp | ATCCAAATTTCTTTCAACAAATGGCAGCTGCTAATAAACAGGCTTTaGTGGCCAATCCTCCGAGAAGCCCGGTCTAACTCTCCGGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: IQISFNKWQLLINRL*WPILREARSNSPVF Trigger: AAACACCGGAGAGTTAGACCGGGCTTCTCGGAGGATTGGCCACCAAAGCCTGTTTATTAGCAGCTGCCATTTGTTGAAAGAAATTTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396093.7 |
||
| CDS-3UTR CAA 90 bp | TTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGCCGTCAAAACGTGATTaGTTGCAGTTGCAGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LAYFMCGPRQFFFQCGSGPSKRD*LQLQSA Trigger: GGCTGACTGCAACTGCAACAAATCACGTTTTGACGG...CCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CAA 90 bp | AGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAACAGCCCAGAACAGCTTaGAATGCAGCCCAACACAAA | + |
|
Preference number: 5 (lower is better) Translates to: SIFYVRPKTILLPMWLREQPRTA*NAAQHK Trigger: TTTGTGTTGGGCTGCATTCAAAGCTGTTCTGGGCTG...TTCCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CAA 90 bp | TTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGCGTGATTTGTTGCAGTaGCAGTCAGCCCAATTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LAYFMCGPRQFFFQCGSGRDLLQ*QSAQLV Trigger: CACTAATTGGGCTGACTGCAACTGCAACAAATCACG...CCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
||
| CDS CCA 90 bp | CAAATTTCTTTCAACAAATGGCAGCTGCTAATAAACAGGCTTTGGTaGCCAATCCTCCTGCATGGAAAAGAATGGGGAGATCAGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: QISFNKWQLLINRLW*PILLHGKEWGDQKT Trigger: GGTCTTCTGATCTCCCCATTCTTTTCCATGCAGGAGGATTGGCCACCAAAGCCTGTTTATTAGCAGCTGCCATTTGTTGAAAGAAATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000314748.10 ENST00000444129.7 ENST00000539672.1 |
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| CDS-3UTR CAA 90 bp | TTCTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATAGCCTGCTTCAGGATCTaGATTAGATCTCTGCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: FFQCGSGKPKDWTSLIYIACFRI*IRSLQY Trigger: GTACTGCAGAGATCTAATCAAGATCCTGAAGCAGGC...TATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
||
| CDS-3UTR CAA 90 bp | CTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTAAAAAGCGCACACCCTaGACCCTTCAAAGCTGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: LPMWLREAKRLDILDLHIKKRTP*TLQSCN Trigger: GTTACAGCTTTGAAGGGTCAAGGGTGTGCGCTTTTT...AATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CAA 90 bp | TTCTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATAAAATCATCTACAAGCTaGTCCAACTCTAGCCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: FFQCGSGKPKDWTSLIYIKSSTS*SNSSPR Trigger: CCGTGGGCTAGAGTTGGACAAGCTTGTAGATGATTT...TATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS CCA 90 bp | CCACTACTACCTGAATTTCATTGGCTGACCATTTTCTATGAACTGTaGTCTTATCTTCTGGCTCCAAATTGGCATGGTAAGCACCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PLLPEFHWLTIFYEL*SYLLAPNWHGKHLH Trigger: ATGCAGGTGCTTACCATGCCAATTTGGAGCCAGAAGATAAGACCACAGTTCATAGAAAATGGTCAGCCAATGAAATTCAGGTAGTAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421138.6 ENST00000444129.7 |
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| CDS-3UTR CAA 90 bp | CTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTGAAGAATCATATTCATaGCTTGCCCCGGCATCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LPMWLREAKRLDILDLHIEESYS*LAPASE Trigger: TTCTGATGCCGGGGCAAGCAATGAATATGATTCTTC...AATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CAA 90 bp | TTCTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATCAAAACGTGATTTGTaGCAGTTGCAGTCAGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: FFQCGSGKPKDWTSLIYISKRDL*QLQSAQ Trigger: TTGGGCTGACTGCAACTGCAACAAATCACGTTTTGA...TATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CAA 90 bp | AGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGAATGCACGTCCACTCTCTaGGTAATAATTTTCCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: SIFYVRPKTILLPMWLRECTSTL*VIIFHG Trigger: TCCATGGAAAATTATTACCAAGAGAGTGGACGTGCA...TTCCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CAA 90 bp | CTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTCTGAATAAGCTCTTGTaGCCTTTCCGTAAGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPMWLREAKRLDILDLHILNKLL*PFRKFL Trigger: CAAGAACTTACGGAAAGGCAACAAGAGCTTATTCAG...AATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CAA 90 bp | TTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGTTTCTGAATAAGCTCTaGTTGCCTTTCCGTAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LAYFMCGPRQFFFQCGSGFLNKL*LPFRKF Trigger: GAACTTACGGAAAGGCAACAAGAGCTTATTCAGAAA...CCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS TCA 90 bp | TGCACTGTCTTTACAGCAGTTATCGCACATTTTGTTACATGCTTCTaGGTTCCATACTTCATCAAAATGTTGAGCCATCAACACACGACG | + |
|
Preference number: 5 (lower is better) Translates to: CTVFTAVIAHFVTCF*VPYFIKMLSHQHTT Trigger: CGTCGTGTGTTGATGGCTCAACATTTTGATGAAGTATGGAACTCAGAAGCATGTAACAAAATGTGCGATAACTGCTGTAAAGACAGTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000421138.6 ENST00000444129.7 |
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| CDS-3UTR CAA 90 bp | TTAGCATATTTTATGTGCGGCCCAAGACAATTCTTCTTCCAATGTGGCTCAGGGCCTTTCCGTAAGTTCTaGAATTTGAATTTCTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LAYFMCGPRQFFFQCGSGPFRKF*NLNFYC Trigger: GCAGTAGAAATTCAAATTCAAGAACTTACGGAAAGG...CCCTGAGCCACATTGGAAGAAGAATTGTCTTGGGCCGCACATAAAATATGCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CAA 90 bp | TGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTTAACTTAAATCATATTCATTGCTaGCCCCGGCATCAGAATCCT | + |
|
Preference number: 5 (lower is better) Translates to: CGSGKPKDWTSLIYIFNLNHIHC*PRHQNP Trigger: AGGATTCTGATGCCGGGGCAAGCAATGAATATGATT...TAAGTTAAATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CAA 90 bp | CTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTTACCAAATGCAACAGTaGCCACTACTACCTGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: LPMWLREAKRLDILDLHIYQMQQ*PLLPEF Trigger: AAATTCAGGTAGTAGTGGCAACTGTTGCATTTGGTA...AATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CAA 90 bp | CTTCCAATGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTCAGTTATCGCACATTTaGTTACATGCTTCTGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPMWLREAKRLDILDLHIQLSHI*LHASEF Trigger: GAACTCAGAAGCATGTAACAAAATGTGCGATAACTG...AATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACATTGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS GCA 90 bp | TCAATCAGTTTCAATGGAGTGAGTTTTTCATTCAGTTCCTCTGCCTaGTTCAGGATCTTGATTAGATCTCTGCAGTACTCTGTTATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SISFNGVSFSFSSSA*FRILIRSLQYSVMF Trigger: GAACATAACAGAGTACTGCAGAGATCTAATCAAGATCCTGAAGCAGGCAGAGGAACTGAATGAAAAACTCACTCCATTGAAACTGATTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000421138.6 ENST00000444129.7 |
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| CDS-3UTR CAA 90 bp | TGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTTAACTTAATTCCTGATTGCCCTTaGTATCTCCCATTAATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CGSGKPKDWTSLIYIFNLIPDCP*YLPLMS Trigger: GCTCATTAATGGGAGATACAAAGGGCAATCAGGAAT...TAAGTTAAATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CAA 90 bp | TGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTTAACTTATACTTCATCAAAATGTaGAGCCATCAACACACGACG | + |
|
Preference number: 5 (lower is better) Translates to: CGSGKPKDWTSLIYIFNLYFIKM*SHQHTT Trigger: CGTCGTGTGTTGATGGCTCAACATTTTGATGAAGTA...TAAGTTAAATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS-3UTR CAA 90 bp | TGTGGCTCAGGGAAGCCAAAAGATTGGACATCCTTGATCTACATATTTAACTTACAAACTAACCGTAACTaGTTCAGAGTCTTTCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: CGSGKPKDWTSLIYIFNLQTNRN*FRVFLR Trigger: TCTCAGAAAGACTCTGAACAAGTTACGGTTAGTTTG...TAAGTTAAATATGTAGATCAAGGATGTCCAATCTTTTGGCTTCCCTGAGCCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444129.7 |
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| CDS TCA 72 bp | CGGTTTCTCCTCCGCCAATGTGTGGGCGAAAGGAAGTaGTCCGCTACAGACCGGCCTCGCCCGAGAAGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RFLLRQCVGERK*SATDRPRPRSP Trigger: CGGGCTTCTCGGGCGAGGCCGGTCTGTAGCGGATCACTTCCTTTCGCCCACACATTGGCGGAGGAGAAACCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000314748.10 |
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| CDS TCA 72 bp | CCGCTACTCGGGAGTAAAATCTTCCCGCCAGCCAGCTaGGAGCATCCACCCTTCCGGGTCGGTCCGTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLLGSKIFPPAS*EHPPFRVGPFS Trigger: GCTGAACGGACCGACCCGGAAGGGTGGATGCTCTCAGCTGGCTGGCGGGAAGATTTTACTCCCGAGTAGCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000314748.10 ENST00000396093.7 ENST00000536240.5 |
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| CDS TCA 72 bp | CGGTTTCTCCTCCGCCAATGTGTGGGCGAAAGGAAGTaGTCCGCTACAGACCGGCCTCGCCCTGCAGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RFLLRQCVGERK*SATDRPRPAAG Trigger: TCCTGCTGCAGGGCGAGGCCGGTCTGTAGCGGATCACTTCCTTTCGCCCACACATTGGCGGAGGAGAAACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444129.7 |
||
| CDS CAA 72 bp | GTGATCCGCTACAGACCGGCCTCGCCTCTCCGGTGTTaGACTGTCCGGTGTCCGACTGTCCTGTGTCCGACT | + |
|
Preference number: 6 (lower is better) Translates to: VIRYRPASPLRC*TVRCPTVLCPT Trigger: AGTCGGACACAGGACAGTCGGACACCGGACAGTCAAACACCGGAGAGGCGAGGCCGGTCTGTAGCGGATCAC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539672.1 |
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| CDS CAA 90 bp | CCAGAGCCTCTCCCCACCGAGAAGCCCGGTCTAACTCTCCGGTGTTaGACTGTCCGGTGTCCGACTGTCCTGTGTCCGACTCTCCGATCT | + |
|
Preference number: 6 (lower is better) Translates to: PEPLPTEKPGLTLRC*TVRCPTVLCPTLRS Trigger: AGATCGGAGAGTCGGACACAGGACAGTCGGACACCGGACAGTCAAACACCGGAGAGTTAGACCGGGCTTCTCGGTGGGGAGAGGCTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421138.6 ENST00000444129.7 ENST00000536964.5 |
||
| CDS TCA 72 bp | CGGTTTCTCCTCCGCCAATGTGTGGGCGAAAGGAAGTaGTCCGCTACAGACCGGCCTCGCCTCTCCGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RFLLRQCVGERK*SATDRPRLSGV Trigger: AACACCGGAGAGGCGAGGCCGGTCTGTAGCGGATCACTTCCTTTCGCCCACACATTGGCGGAGGAGAAACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539672.1 |
||
| CDS CAA 72 bp | CTCCCCACCGAGAAGCCCGGTCTAACTCTCCGGTGTTaGACTGTCCGGTGTCCGACTGTCCTGTGTCCGACT | + |
|
Preference number: 6 (lower is better) Translates to: LPTEKPGLTLRC*TVRCPTVLCPT Trigger: AGTCGGACACAGGACAGTCGGACACCGGACAGTCAAACACCGGAGAGTTAGACCGGGCTTCTCGGTGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000421138.6 ENST00000444129.7 ENST00000536964.5 |
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| CDS CAA 90 bp | CGAAAGGAAGTGATCCGCTACAGACCGGCCTCGCCTCTCCGGTGTTaGACTGTCCGGTGTCCGACTGTCCTGTGTCCGACTCTCCGATCT | + |
|
Preference number: 6 (lower is better) Translates to: RKEVIRYRPASPLRC*TVRCPTVLCPTLRS Trigger: AGATCGGAGAGTCGGACACAGGACAGTCGGACACCGGACAGTCAAACACCGGAGAGGCGAGGCCGGTCTGTAGCGGATCACTTCCTTTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000539672.1 |
||
| CDS TCA 72 bp | AAACAGGCTTTGGTGGCCAATCCTCTCTCCGGTGTTTaGCTGTCCGGTGTCCGACTGTCCTGTGTCCGACTC | + |
|
Preference number: 6 (lower is better) Translates to: KQALVANPLSGV*LSGVRLSCVRL Trigger: GAGTCGGACACAGGACAGTCGGACACCGGACAGTCAAACACCGGAGAGAGGATTGGCCACCAAAGCCTGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542432.5 |
||
| CDS TCA 72 bp | GTGCCCCTAAAGGCCCGAGTTCTCAGAGCAGGGCAGTaGTTAACTTTCCGGTTTCTCCTCCGCCAATGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VPLKARVLRAGQ*LTFRFLLRQCV Trigger: CACACATTGGCGGAGGAGAAACCGGAAAGTTAATCACTGCCCTGCTCTGAGAACTCGGGCCTTTAGGGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000314748.10 ENST00000444129.7 ENST00000539672.1 |
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| CDS CCA 72 bp | AGGCTTTGGTGGCCAATCCTCCTGCATGGAAAAGAATaGGGAGATCAGAAGACCGGTCAGCAGGCGAACGTG | + |
|
Preference number: 6 (lower is better) Translates to: RLWWPILLHGKE*GDQKTGQQANV Trigger: CACGTTCGCCTGCTGACCGGTCTTCTGATCTCCCCATTCTTTTCCATGCAGGAGGATTGGCCACCAAAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000314748.10 ENST00000444129.7 ENST00000539672.1 |
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| CDS CAA 90 bp | ATAATCCAAATTTCTTTCGAGAAGCCCGGTCTAACTCTCCGGTGTTaGACTGTCCGGTGTCCGACTGTCCTGTGTCCGACTCTCCGATCT | + |
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Preference number: 6 (lower is better) Translates to: IIQISFEKPGLTLRC*TVRCPTVLCPTLRS Trigger: AGATCGGAGAGTCGGACACAGGACAGTCGGACACCGGACAGTCAAACACCGGAGAGTTAGACCGGGCTTCTCGAAAGAAATTTGGATTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000536240.5 |
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| CDS CCA 72 bp | TTCAACAAATGGCAGCTGCTAATAAACAGGCTTTGGTaGCCAATCCTCCGAGAAGCCCGGTCTAACTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: FNKWQLLINRLW*PILREARSNSP Trigger: CGGAGAGTTAGACCGGGCTTCTCGGAGGATTGGCCACCAAAGCCTGTTTATTAGCAGCTGCCATTTGTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396093.7 |
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| CDS CCA 72 bp | GCTAATAAACAGGCTTTGGTGGCCAATCCTCCTGCATaGAAAAGAATGGGGAGATCAGAAGACCGGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: ANKQALVANPPA*KRMGRSEDRSA Trigger: TGCTGACCGGTCTTCTGATCTCCCCATTCTTTTCCATGCAGGAGGATTGGCCACCAAAGCCTGTTTATTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000314748.10 ENST00000444129.7 ENST00000539672.1 |
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| CDS CCA 72 bp | TTCAACAAATGGCAGCTGCTAATAAACAGGCTTTGGTaGCCAATCCTCTCTCCGGTGTTTGACTGTCCGGTG | + |
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Preference number: 6 (lower is better) Translates to: FNKWQLLINRLW*PILSPVFDCPV Trigger: CACCGGACAGTCAAACACCGGAGAGAGGATTGGCCACCAAAGCCTGTTTATTAGCAGCTGCCATTTGTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542432.5 |
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| CDS CAA 90 bp | CTTCACGAGGAAGTGTGGGAGCCACAACACCTGCTACTCTCAGTTTaGCTGCACCCTTTCCCATCCAAGAATCAATCAGTTTCAATGGAG | + |
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Preference number: 6 (lower is better) Translates to: LHEEVWEPQHLLLSV*LHPFPSKNQSVSME Trigger: CTCCATTGAAACTGATTGATTCTTGGATGGGAAAGGGTGCAGCAAAACTGAGAGTAGCAGGTGTTGTGGCTCCCACACTTCCTCGTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421138.6 ENST00000444129.7 |
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| CDS CCA 72 bp | TCTTTCAACAAATGGCAGCTGCTAATAAACAGGCTTTaGTGGCCAATCCTCCGAGAAGCCCGGTCTAACTCT | + |
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Preference number: 6 (lower is better) Translates to: SFNKWQLLINRL*WPILREARSNS Trigger: AGAGTTAGACCGGGCTTCTCGGAGGATTGGCCACCAAAGCCTGTTTATTAGCAGCTGCCATTTGTTGAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396093.7 |
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| CDS CCA 72 bp | TCTTTCAACAAATGGCAGCTGCTAATAAACAGGCTTTaGTGGCCAATCCTCTCTCCGGTGTTTGACTGTCCG | + |
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Preference number: 6 (lower is better) Translates to: SFNKWQLLINRL*WPILSPVFDCP Trigger: CGGACAGTCAAACACCGGAGAGAGGATTGGCCACCAAAGCCTGTTTATTAGCAGCTGCCATTTGTTGAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000542432.5 |
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| CDS CAA 72 bp | GAAGTGTGGGAGCCACAACACCTGCTACTCTCAGTTTaGCTGCACCCTTTCCCATCCAAGAATCAATCAGTT | + |
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Preference number: 6 (lower is better) Translates to: EVWEPQHLLLSV*LHPFPSKNQSV Trigger: AACTGATTGATTCTTGGATGGGAAAGGGTGCAGCAAAACTGAGAGTAGCAGGTGTTGTGGCTCCCACACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421138.6 ENST00000444129.7 |
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| CDS GCA 72 bp | TGTGGGAGCCACAACACCTGCTACTCTCAGTTTTGCTaGACCCTTTCCCATCCAAGAATCAATCAGTTTCAA | + |
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Preference number: 6 (lower is better) Translates to: CGSHNTCYSQFC*TLSHPRINQFQ Trigger: TTGAAACTGATTGATTCTTGGATGGGAAAGGGTGCAGCAAAACTGAGAGTAGCAGGTGTTGTGGCTCCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421138.6 ENST00000444129.7 |
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| CDS GCA 72 bp | CTTTATTCCAAGCGGCAGGTGAAGAATCATATTCATTaGTTGCCCCGGCATCAGAATCCTCTAAACACTGCT | + |
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Preference number: 6 (lower is better) Translates to: LYSKRQVKNHIH*LPRHQNPLNTA Trigger: AGCAGTGTTTAGAGGATTCTGATGCCGGGGCAAGCAATGAATATGATTCTTCACCTGCCGCTTGGAATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000314748.10 ENST00000396093.7 ENST00000421138.6 ENST00000444129.7 ENST00000536240.5 ENST00000536964.5 ENST00000539672.1 ENST00000542432.5 |
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| CDS CAA 72 bp | TTCTTTCAACAAATGGCAGCTGCTAATAAACAGGCTTaGGTGGCCAATCCTCCTGCATGGAAAAGAATGGGG | + |
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Preference number: 6 (lower is better) Translates to: FFQQMAAANKQA*VANPPAWKRMG Trigger: CCCCATTCTTTTCCATGCAGGAGGATTGGCCACCAAAGCCTGTTTATTAGCAGCTGCCATTTGTTGAAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000314748.10 ENST00000444129.7 ENST00000539672.1 |
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| CDS CAA 72 bp | TCTTTATTCCAAGCGGCAGGTGAAGAATCATATTCATaGCTTGCCCCGGCATCAGAATCCTCTAAACACTGC | + |
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Preference number: 6 (lower is better) Translates to: SLFQAAGEESYS*LAPASESSKHC Trigger: GCAGTGTTTAGAGGATTCTGATGCCGGGGCAAGCAATGAATATGATTCTTCACCTGCCGCTTGGAATAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000314748.10 ENST00000396093.7 ENST00000421138.6 ENST00000444129.7 ENST00000536240.5 ENST00000536964.5 ENST00000539672.1 ENST00000542432.5 |
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| CDS CAA 72 bp | TTCTTTCAACAAATGGCAGCTGCTAATAAACAGGCTTaGGTGGCCAATCCTCCCTTGACCCTTCAAAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: FFQQMAAANKQA*VANPPLTLQSC Trigger: ACAGCTTTGAAGGGTCAAGGGAGGATTGGCCACCAAAGCCTGTTTATTAGCAGCTGCCATTTGTTGAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000421138.6 |
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| CDS TCA 72 bp | AGACCATGGAAAATCTTCTTTATTCCAAGCGGCAGGTaGAGAATCATATTCATTGCTTGCCCCGGCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: RPWKIFFIPSGR*RIIFIACPGIR Trigger: TCTGATGCCGGGGCAAGCAATGAATATGATTCTTCACCTGCCGCTTGGAATAAAGAAGATTTTCCATGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000314748.10 ENST00000396093.7 ENST00000421138.6 ENST00000444129.7 ENST00000536240.5 ENST00000536964.5 ENST00000542432.5 |
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| CDS CAA 72 bp | TATTCCAAGCGGCAGGTGAAGAATCATATTCATTGCTaGCCCCGGCATCAGAATCCTCTAAACACTGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: YSKRQVKNHIHC*PRHQNPLNTAL Trigger: TAAAGCAGTGTTTAGAGGATTCTGATGCCGGGGCAAGCAATGAATATGATTCTTCACCTGCCGCTTGGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000314748.10 ENST00000396093.7 ENST00000421138.6 ENST00000444129.7 ENST00000536240.5 ENST00000536964.5 ENST00000539672.1 ENST00000542432.5 |
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| CDS CCA 72 bp | TTCTATGAACTGTGGTCTTATCTTCTGGCTCCAAATTaGCATGGTAAGCACCTGCATGAATTCCCAGATTCT | + |
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Preference number: 6 (lower is better) Translates to: FYELWSYLLAPN*HGKHLHEFPDS Trigger: AGAATCTGGGAATTCATGCAGGTGCTTACCATGCCAATTTGGAGCCAGAAGATAAGACCACAGTTCATAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421138.6 ENST00000444129.7 |
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| CDS CAA 90 bp | AATCCAAATTTCTTTCAACAAATGGCAGCTGCTAATAAACAGGCTTaGGTGGCCAATCCTCCTGCATGGAAAAGAATGGGGAGATCAGAA | + |
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Preference number: 6 (lower is better) Translates to: NPNFFQQMAAANKQA*VANPPAWKRMGRSE Trigger: TTCTGATCTCCCCATTCTTTTCCATGCAGGAGGATTGGCCACCAAAGCCTGTTTATTAGCAGCTGCCATTTGTTGAAAGAAATTTGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000314748.10 ENST00000444129.7 ENST00000539672.1 |
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| CDS GCA 72 bp | TTCAATGGAGTGAGTTTTTCATTCAGTTCCTCTGCCTaGTTCAGGATCTTGATTAGATCTCTGCAGTACTCT | + |
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Preference number: 6 (lower is better) Translates to: FNGVSFSFSSSA*FRILIRSLQYS Trigger: AGAGTACTGCAGAGATCTAATCAAGATCCTGAAGCAGGCAGAGGAACTGAATGAAAAACTCACTCCATTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000421138.6 ENST00000444129.7 |
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| CDS TCA 72 bp | GTTTTTCATTCAGTTCCTCTGCCTGCTTCAGGATCTTaGTTAGATCTCTGCAGTACTCTGTTATGTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: VFHSVPLPASGS*LDLCSTLLCSF Trigger: GAAAGAACATAACAGAGTACTGCAGAGATCTAATCAAGATCCTGAAGCAGGCAGAGGAACTGAATGAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000421138.6 ENST00000444129.7 |
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| CDS CAA 72 bp | AGTTTTTCATTCAGTTCCTCTGCCTGCTTCAGGATCTaGATTAGATCTCTGCAGTACTCTGTTATGTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SFSFSSSACFRI*IRSLQYSVMFF Trigger: AAAGAACATAACAGAGTACTGCAGAGATCTAATCAAGATCCTGAAGCAGGCAGAGGAACTGAATGAAAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000421138.6 ENST00000444129.7 |
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| CDS TCA 72 bp | TTACATGCTTCTGAGTTCCATACTTCATCAAAATGTTaGGCCATCAACACACGACGACATTTGCTTATGTTT | + |
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Preference number: 6 (lower is better) Translates to: LHASEFHTSSKC*AINTRRHLLMF Trigger: AAACATAAGCAAATGTCGTCGTGTGTTGATGGCTCAACATTTTGATGAAGTATGGAACTCAGAAGCATGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000421138.6 ENST00000444129.7 |
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| CDS TCA 72 bp | AGCTTTAACTCGGAGTTTTTATTTACCATTTCAGCATaGACCCATTTAACATGCTCCTTAGAACTAGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: SFNSEFLFTISA*THLTCSLELEA Trigger: TGCTTCTAGTTCTAAGGAGCATGTTAAATGGGTTCATGCTGAAATGGTAAATAAAAACTCCGAGTTAAAGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000314748.10 ENST00000396093.7 ENST00000421138.6 ENST00000444129.7 |
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| CDS TCA 72 bp | TTTACAGCAGTTATCGCACATTTTGTTACATGCTTCTaGGTTCCATACTTCATCAAAATGTTGAGCCATCAA | + |
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Preference number: 6 (lower is better) Translates to: FTAVIAHFVTCF*VPYFIKMLSHQ Trigger: TTGATGGCTCAACATTTTGATGAAGTATGGAACTCAGAAGCATGTAACAAAATGTGCGATAACTGCTGTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000421138.6 ENST00000444129.7 |
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| CDS CAA 72 bp | TCAAATGCACTGTCTTTACAGCAGTTATCGCACATTTaGTTACATGCTTCTGAGTTCCATACTTCATCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SNALSLQQLSHI*LHASEFHTSSK Trigger: TTTTGATGAAGTATGGAACTCAGAAGCATGTAACAAAATGTGCGATAACTGCTGTAAAGACAGTGCATTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000421138.6 ENST00000444129.7 |
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