RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RECK (Homo sapiens)

Ensembl gene IDs: ENSG00000122707

Ensembl transcript IDs: ENST00000377966.4, ENST00000475774.5, ENST00000479053.1

Found 229 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCCTaGATGTCTTTTTCAAGGCAGGAGAGTGAGGTGGAGGAGCATTCT +
Preference number: 1 (lower is better)
Translates to: HVPFLGQYSTTNQQS*MSFSRQESEVEEHS
Trigger: AGAATGCTCCTCCACCTCACTCTCCTGCCTTGAAAAAGACATTCAGGACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377966.4
3UTR TCA 90 bp GCAATGTCACTTCTCCCTTTCACAAAAGTCACAGACACAAATCCGTaGCCAGTGAGCCTGTTGCTTACAACATATAATTATATGAGTGTC +
Preference number: 1 (lower is better)
Translates to: AMSLLPFTKVTDTNP*PVSLLLTTYNYMSV
Trigger: GACACTCATATAATTATATGTTGTAAGCAACAGGCTCACTGGTCACGGATTTGTGTCTGTGACTTTTGTGAAAGGGAGAAGTGACATTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
3UTR-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGGCAGGAGAGTGAGGTaGAGGAGCATTCTGCACTTT +
Preference number: 2 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSGRRVR*RSILHF
Trigger: AAAGTGCAGAATGCTCCTCCACCTCACTCTCCTGCC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
3UTR TCA 72 bp CTTCTCCCTTTCACAAAAGTCACAGACACAAATCCGTaGCCAGTGAGCCTGTTGCTTACAACATATAATTAT +
Preference number: 3 (lower is better)
Translates to: LLPFTKVTDTNP*PVSLLLTTYNY
Trigger: ATAATTATATGTTGTAAGCAACAGGCTCACTGGTCACGGATTTGTGTCTGTGACTTTTGTGAAAGGGAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
3UTR TCA 72 bp AAAAAGGCAATTGCAACAAGCATGCTACATCAGCACTaGCATATTCTGAAAGCTTTAAGTGCCCATTTTTCA +
Preference number: 3 (lower is better)
Translates to: KKAIATSMLHQH*HILKALSAHFS
Trigger: TGAAAAATGGGCACTTAAAGCTTTCAGAATATGTCAGTGCTGATGTAGCATGCTTGTTGCAATTGCCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTGCTCGGACCCAGCTTaGCCGCAGCCGCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSCSDPA*PQPLPP
Trigger: CGGCGGCAGCGGCTGCGGCCAAGCTGGGTCCGAGCA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTCCAGAGCCGCGGGATaGTCGGACCCAGCTTGGCCG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSSRAAG*SDPAWP
Trigger: CGGCCAAGCTGGGTCCGAGCATCCCGCGGCTCTGGA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGACGGAGCTGTGCTCTaGGAGGACTCCGACGGCCTG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSDGAVL*EDSDGL
Trigger: CAGGCCGTCGGAGTCCTCTCAGAGCACAGCTCCGTC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAAGAAGGCCTGGCCCTaGCACCGGCCGATGGCACAC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSKKAWP*HRPMAH
Trigger: GTGTGCCATCGGCCGGTGTCAGGGCCAGGCCTTCTT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCGGGCTCGGTTGCTCTaGAAAAGGGCTGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSRARLL*KRAGRD
Trigger: GTCCCTGCCAGCCCTTTTGCAGAGCAACCGAGCCCG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTCGGCGACGGAGCTGTaGTCTGAGAGGACTCCGACG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSSATEL*SERTPT
Trigger: CGTCGGAGTCCTCTCAGAGCACAGCTCCGTCGCCGA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCGGCCGATGGCACACTaGTGGAGACCTGTACCTGGG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSRPMAH*WRPVPG
Trigger: CCCAGGTACAGGTCTCCAGCAGTGTGCCATCGGCCG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCCTGACACCGGCCGATaGCACACTGCTGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSPDTGR*HTAGDL
Trigger: CAGGTCTCCAGCAGTGTGCCATCGGCCGGTGTCAGG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGCAGAGAGAGGGACATaGGACGCCAAAGTCGGGCTG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSAERGT*DAKVGL
Trigger: CAGCCCGACTTTGGCGTCCCATGTCCCTCTCTCTGC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAAGCACCCGGTGGGATaGTGGGTTTGCATCCAGCTG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSKHPVG*WVCIQL
Trigger: CAGCTGGATGCAAACCCATCATCCCACCGGGTGCTT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCCACACAGCGAGCAATaGAGGCACTGGGGTAAGTGC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSPHSEQ*RHWGKC
Trigger: GCACTTACCCCAGTGCCTGCATTGCTCGCTGTGTGG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAGAGCGAAGGACACTTaGCAGAAGCACACTCGGCGA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSRAKDT*QKHTRR
Trigger: TCGCCGAGTGTGCTTCTGTCAAGTGTCCTTCGCTCT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAGATGCCTGCTTGCATaGCTGTCGACACTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSRCLLA*LSTLQG
Trigger: GCCTTGGAGTGTCGACAGGCATGCAAGCAGGCATCT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAGGCACTGGGGTAAGTaGGCCCATTCTGCCCACATA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSRHWGK*AHSAHI
Trigger: TATGTGGGCAGAATGGGCGCACTTACCCCAGTGCCT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTACATACGGGCTCGGTTaGTCTGCAAAAGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSTYGLG*SAKGLA
Trigger: TGCCAGCCCTTTTGCAGAGCAACCGAGCCCGTATGT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCCCATAGTAATCGACTaGCACGCGATCCGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSPIVID*HAIRVG
Trigger: GCCTACTCGGATCGCGTGGCAGTCGATTACTATGGG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGGTGGAGGAGCATTCTaGACTTTCCGTGGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSGGGAF*TFRGQS
Trigger: TGACTGCCCACGGAAAGTGCAGAATGCTCCTCCACC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGAGCAATGCAGGCACTaGGGTAAGTGCGCCCATTCT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSEQCRH*GKCAHS
Trigger: AGAATGGGCGCACTTACCCCAGTGCCTGCATTGCTC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGCAACAAGCACCCGGTaGGATGATGGGTTTGCATCC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSATSTR*DDGFAS
Trigger: GGATGCAAACCCATCATCCCACCGGGTGCTTGTTGC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCCGATGGCACACTGCTaGAGACCTGTACCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSPMAHC*RPVPGK
Trigger: TTTCCCAGGTACAGGTCTCCAGCAGTGTGCCATCGG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTGCCAAAGAGGATCTTaGGGCAAGGGCTGGGTCTTA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSCQRGS*GKGWVL
Trigger: TAAGACCCAGCCCTTGCCTCAAGATCCTCTTTGGCA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTACGACGGTCATCTTCTaGACTGTGCTCACTGAGGCA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSTTVIF*TVLTEA
Trigger: TGCCTCAGTGAGCACAGTTCAGAAGATGACCGTCGT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTACAGGGCAGACCTGTaGAGGTACGACGGTCATCTT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSYRADL*RYDGHL
Trigger: AAGATGACCGTCGTACCTTCACAGGTCTGCCCTGTA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGGGTTTGCATCCAGCTaGCAAGAGCGAAGGACACTT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSGFASS*QERRTL
Trigger: AAGTGTCCTTCGCTCTTGGCAGCTGGATGCAAACCC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTATGTCCAGAGCAAGTaGAAGGCAAGGCCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSYVQSK*KARPKL
Trigger: CAGCTTGGGCCTTGCCTTGCACTTGCTCTGGACATA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCTCTGGGCAATAATCTaGGGCTCGCTGCAACAGATG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSLWAII*GSLQQM
Trigger: CATCTGTTGCAGCGAGCCCCAGATTATTGCCCAGAG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTTTCTACAGCCCAACTaGCAAGGTTCCCGGACATCC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSFLQPN*QGSRTS
Trigger: GGATGTCCGGGAACCTTGCCAGTTGGGCTGTAGAAA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGGCAGGGCAAGGATTTaGGTTACAGGGATGAGTCAC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSGRARI*VTGMSH
Trigger: GTGACTCATCCCTGTAACCCAAATCCTTGCCCTGCC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCGTCAGGCAGACCTGTaGTTTGGGTATGCACCTTTG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSRQADL*FGYAPL
Trigger: CAAAGGTGCATACCCAAACCACAGGTCTGCCTGACG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTACAGGATCTTGGACCTaGTCACACGCGAGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSTGSWT*SHASCL
Trigger: AAGACAGCTCGCGTGTGACCAGGTCCAAGATCCTGT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTCACAAACAGGATCTTaGACCTGGTCACACGCGAGC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSSQTGS*TWSHAS
Trigger: GCTCGCGTGTGACCAGGTCCAAGATCCTGTTTGTGA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCATACAGGGACAAACTaGTCTGCACAGTTACAGGGC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSHTGTN*SAQLQG
Trigger: GCCCTGTAACTGTGCAGATCAGTTTGTCCCTGTATG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGATCCAAACTCAAACTaGTGGTCTTGGAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSDPNSN*WSWRPT
Trigger: TGTGGGCCTCCAAGACCATCAGTTTGAGTTTGGATC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTACAGACACAAATCCGTaGCCAGTGAGCCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSTDTNP*PVSLLL
Trigger: AAGCAACAGGCTCACTGGTCACGGATTTGTGTCTGT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTTGAAGATGCCTGCTTaGATGCCTGTCGACACTCCA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSLKMPA*MPVDTP
Trigger: TGGAGTGTCGACAGGCATGCAAGCAGGCATCTTCAA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTCATCTTCTGAACTGTaGTCACTGAGGCAAAGGCGG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSSSSEL*SLRQRR
Trigger: CCGCCTTTGCCTCAGTGAGCACAGTTCAGAAGATGA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAGGGACAAACTGATCTaGACAGTTACAGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSRDKLI*TVTGQT
Trigger: GGTCTGCCCTGTAACTGTGCAGATCAGTTTGTCCCT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCTTCACAGAGCTCATTaGCAGGGCAAGGATTTGGGT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSLHRAH*QGKDLG
Trigger: ACCCAAATCCTTGCCCTGCCAATGAGCTCTGTGAAG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTACACGCGAGCTGTCTTaGTACACACTCATACTGGCT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSTRELS*YTLILA
Trigger: AGCCAGTATGAGTGTGTACCAAGACAGCTCGCGTGT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAAACACATCACACTGTaGGACAGACACGTGCATGCG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSKHITL*DRHVHA
Trigger: CGCATGCACGTGTCTGTCCCACAGTGTGATGTGTTT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCATGGCTCCTTGATCTaGCTGTGCATTACAACTCCT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSHGSLI*LCITTP
Trigger: AGGAGTTGTAATGCACAGTCAGATCAAGGAGCCATG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTCCCTTGACGGACAATaGAATCAGAAGCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSSLDGQ*NQKLLP
Trigger: TGGGAGAAGCTTCTGATTTCATTGTCCGTCAAGGGA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCAAATCCGTGACCAGTaGGCCTGTTGCTTACAACAT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSQIRDQ*ACCLQH
Trigger: ATGTTGTAAGCAACAGGCTCACTGGTCACGGATTTG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTTCTTTGAAGATGCCTaGTTGCATGCCTGTCGACAC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSFFEDA*LHACRH
Trigger: GTGTCGACAGGCATGCAAGCAGGCATCTTCAAAGAA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGCCAACTCTGTGTATTaGCCCAGCTCATGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSANSVY*PSSCCK
Trigger: TTTACAGCATGAGCTGGGGCAATACACAGAGTTGGC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGTGCAGAGATTGTTGTaGTCCATGTGGTCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSVQRLL*SMWSVS
Trigger: TGACACAGACCACATGGAGCACAACAATCTCTGCAC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTTCAACCATTGTCTCTaGGCAATAATCTGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSFNHCL*AIIWGS
Trigger: CGAGCCCCAGATTATTGCCCAGAGACAATGGTTGAA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGCATTTTGGCAAGCATaGTCTTCAGCTCTGTCACAG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSAFWQA*SSALSQ
Trigger: CTGTGACAGAGCTGAAGACCATGCTTGCCAAAATGC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGGCAGACCTGTGGTTTaGGTATGCACCTTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSGRPVV*VCTFGF
Trigger: AAAACCAAAGGTGCATACCCAAACCACAGGTCTGCC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTCTTACAACCCTCGATaGGACCATCAACAATCTCCA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSSYNPR*DHQQSP
Trigger: TGGAGATTGTTGATGGTCTCATCGAGGGTTGTAAGA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGTGCATTACAACTCCTaGAAAGTTCTGTTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSVHYNS*KVLLAC
Trigger: ACAGGCCAACAGAACTTTTCAGGAGTTGTAATGCAC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAGTGATCGACGGGAATaGTCAGGATCACAATTTCTG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSSDRRE*SGSQFL
Trigger: CAGAAATTGTGATCCTGATCATTCCCGTCGATCACT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGGGGGACCCTTATGGTaGGGAAATGTAAATCATATG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSGGPLW*GNVNHM
Trigger: CATATGATTTACATTTCCTCACCATAAGGGTCCCCC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGATGACCTGCATAACTaGAACAAACCGAGCCCATTT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSDDLHN*NKPSPF
Trigger: AAATGGGCTCGGTTTGTTGCAGTTATGCAGGTCATC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAAGCGATCAAACTCTTaGCAACTCTGTGTATTGCCC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSKRSNS*QLCVLP
Trigger: GGGCAATACACAGAGTTGGCAAGAGTTTGATCGCTT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTTGTTGTGCTCCATGTaGTCTGTGTCACAAACAGGA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSLLCSM*SVSQTG
Trigger: TCCTGTTTGTGACACAGACCACATGGAGCACAACAA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTATTCTGCACTTTCCGTaGGCAGTCAGTTATATGTCC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSILHFP*AVSYMS
Trigger: GGACATATAACTGACTGCCCACGGAAAGTGCAGAAT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGGAAATATCATTCTTTaGAGATGCCTGCTTGCATGC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSGNIIL*RCLLAC
Trigger: GCATGCAAGCAGGCATCTTCAAAGAATGATATTTCC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTCATTCATGGCTCCTTaGTCTGACTGTGCATTACAA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSSFMAP*SDCALQ
Trigger: TTGTAATGCACAGTCAGATCAAGGAGCCATGAATGA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCCCCGAGATTTACTATaGCAAGGTTTAATCTGCAGT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSPRDLL*QGLICS
Trigger: ACTGCAGATTAAACCTTGTCATAGTAAATCTCGGGG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCAGATCATCTGTAGGTaGCAGAAGCTCACAAATACT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSQIICR*QKLTNT
Trigger: AGTATTTGTGAGCTTCTGTCACCTACAGATGATCTG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCTAAAGTACTTGGCCTaGGGTATGTATCCAAAGGTA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSLKYLA*GMYPKV
Trigger: TACCTTTGGATACATACCTCAGGCCAAGTACTTTAG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTTTGGGTTACAGGGATaGGTCACTTCTTCTACAATG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSFGLQG*VTSSTM
Trigger: CATTGTAGAAGAAGTGACTCATCCCTGTAACCCAAA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCCCAGTTTGCAACCTTaGACACAAAAGTATGGAAGA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSPSLQP*TQKYGR
Trigger: TCTTCCATACTTTTGTGTTCAAGGTTGCAAACTGGG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGTTTGTGTGATGACCTaGATAACTGCAACAAACCGA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSVCVMT*ITATNR
Trigger: TCGGTTTGTTGCAGTTATGCAGGTCATCACACAAAC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGGACAGACACGTGCATaGGGATTTTCTGAAGTATTT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSGQTRA*GFSEVF
Trigger: AAATACTTCAGAAAATCCGCATGCACGTGTCTGTCC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAGTCTGTTCGAAAAATaGCTTGACAGTATTCTCGGC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSSLFEK*LDSILG
Trigger: GCCGAGAATACTGTCAAGCCATTTTTCGAACAGACT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTGCTTTTATCTGAGATaGACCAGGAGAAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSCFYLR*TRRRVC
Trigger: ACAGACTCTTCTCCTGGTCCATCTCAGATAAAAGCA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCCATTTCCGTTTTCTTaGACATCAGGATTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSPFPFS*TSGFSC
Trigger: GCAAGAGAATCCTGATGTCCAAGAAAACGGAAATGG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTACTTCATGTCATTCATaGCTCCTTGATCTGACTGTG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSTSCHS*LLDLTV
Trigger: CACAGTCAGATCAAGGAGCCATGAATGACATGAAGT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAATCTGCAGAGCTTTTaGATAGTGATCGACGGGAAT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSNLQSF*IVIDGN
Trigger: ATTCCCGTCGATCACTATCCAAAAGCTCTGCAGATT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTGGTTATCCTTTGAATaGTTACAACACAATGCACCC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSWLSFE*LQHNAP
Trigger: GGGTGCATTGTGTTGTAATCATTCAAAGGATAACCA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTCGGGATTCACTTTTTaGGGAGAAAATCTGTTCACA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSSGFTF*GENLFT
Trigger: TGTGAACAGATTTTCTCCTCAAAAAGTGAATCCCGA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAGGGTGAACAGATTGTaGGCTTTCAAGAAAACATTG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSRVNRL*AFKKTL
Trigger: CAATGTTTTCTTGAAAGCTCACAATCTGTTCACCCT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGAGTTCCCTACATGTTaGAGTGTTTGCTTTAGAACA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSEFPTC*SVCFRT
Trigger: TGTTCTAAAGCAAACACTTCAACATGTAGGGAACTC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAGGTTTAATCTGCAGTaGACAAGCTATTGCTTTCCA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSRFNLQ*TSYCFP
Trigger: TGGAAAGCAATAGCTTGTTCACTGCAGATTAAACCT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTGCATGCGGATTTTCTaGAGTATTTCCAGAACTGTT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSCMRIF*SISRTV
Trigger: AACAGTTCTGGAAATACTTCAGAAAATCCGCATGCA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCAGGATCACAATTTCTaGTTCAATGCTGAAGTATCC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSQDHNF*FNAEVS
Trigger: GGATACTTCAGCATTGAATCAGAAATTGTGATCCTG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAAGCTTCTCCCAGTTTaGAACCTTGAACACAAAAGT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSKLLPV*NLEHKS
Trigger: ACTTTTGTGTTCAAGGTTGCAAACTGGGAGAAGCTT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAATAGAGGTGACATGTaGCTTTCCTTGGCCAATATT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSNRGDM*LSLANI
Trigger: AATATTGGCCAAGGAAAGGCACATGTCACCTCTATT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCAATTGCAACAAGCATaGTACATCAGCACTGACATA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSQLQQA*YISTDI
Trigger: TATGTCAGTGCTGATGTAGCATGCTTGTTGCAATTG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCTAAACAGGTCAACATaGACACTTCCACTGGATTAT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSLNRST*TLPLDY
Trigger: ATAATCCAGTGGAAGTGTCCATGTTGACCTGTTTAG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTGCTTTCCACATCTCTaGCTGGCACTTTTTAATATC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSCFPHL*LALFNI
Trigger: GATATTAAAAAGTGCCAGCCAGAGATGTGGAAAGCA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTACGAATGGAAAGCACTaGGTTAACACACATGATTGT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSTNGKH*VNTHDC
Trigger: ACAATCATGTGTGTTAACCCAGTGCTTTCCATTCGT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTCCACTTTGTCCACATaGACAGATTTTATAACAACC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSSTLST*TDFITT
Trigger: GGTTGTTATAAAATCTGTTCATGTGGACAAAGTGGA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTTTCTGATTCAATGCTaGAGTATCCAAACACATCAC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSFLIQC*SIQTHH
Trigger: GTGATGTGTTTGGATACTTCAGCATTGAATCAGAAA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR TCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTATGCTACATCAGCACTaGCATATTCTGAAAGCTTTA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSMLHQH*HILKAL
Trigger: TAAAGCTTTCAGAATATGTCAGTGCTGATGTAGCAT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGCAATAATTTTCCACTaGTTTTATCTGAGATGGACC +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSAIIFH*FYLRWT
Trigger: GGTCCATCTCAGATAAAAGCAGTGGAAAATTATTGC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTGGAGGTCTATACAGTaGATTTCCATACAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSWRSIQ*ISIQFS
Trigger: AGAAAACTGTATGGAAATGCACTGTATAGACCTCCA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTATGGATCCTTTGACATaGATGATCCAAACTCAAACT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSMDPLT*MIQTQT
Trigger: AGTTTGAGTTTGGATCATGCATGTCAAAGGATCCAT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTTCCACATCTCTGGCTaGCACTTTTTAATATCAAGA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSFHISG*HFLISR
Trigger: TCTTGATATTAAAAAGTGCCAGCCAGAGATGTGGAA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTACAATACAAGACTTCTaGAGGTCTATACAGTGCATT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSTIQDF*RSIQCI
Trigger: AATGCACTGTATAGACCTCCAGAAGTCTTGTATTGT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGGTACACACTCATACTaGCTACATCCAAATTTATCA +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSGTHSY*LHPNLS
Trigger: TGATAAATTTGGATGTAGCCAGTATGAGTGTGTACC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAGGCTTTTTCCTCTTTaGTATAAAGTGCAGAGATTG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSRLFPL*YKVQRL
Trigger: CAATCTCTGCACTTTATACCAAAGAGGAAAAAGCCT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTATCTTTCTAAAAAGTaGTCATCTCATTTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSYLSKK*SSHFPA
Trigger: CGCTGGGAAATGAGATGACCACTTTTTAGAAAGATA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR GCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTTGCATAATGCAAGATaGTTTGATGCAATGTCACTT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSLHNAR*FDAMSL
Trigger: AAGTGACATTGCATCAAAGCATCTTGCATTATGCAA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCGTTGGGTTCCTCATTaGATAAGATTGAGTATAATT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSRWVPH*IRLSII
Trigger: AATTATACTCAATCTTATCCAATGAGGAACCCAACG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CCA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCCTGAAAAGTTCTGTTaGCCTGTTGTTAAAATTAGT +
Preference number: 4 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSPEKFC*PVVKIS
Trigger: ACTAATTTTAACAACAGGCCAACAGAACTTTTCAGG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 90 bp ATGATTACAACACAATGCACCCGCACTGCCCGGAGCCAGGCCCCCTaGCACCTCCGCGACCCCCGCCACGGCCAGCAGAAGGAGCAGCGC +
Preference number: 5 (lower is better)
Translates to: MITTQCTRTARSQAP*HLRDPRHGQQKEQR
Trigger: GCGCTGCTCCTTCTGCTGGCCGTGGCGGGGGTCGCGGAGGTGGCAGGGGGCCTGGCTCCGGGCAGTGCGGGTGCATTGTGTTGTAATCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377966.4
ENST00000475774.5
ENST00000479053.1
CDS CCA 90 bp AAGGAGGAGGGAGTGGCAAGAAGGCCTGGCCCTGACACCGGCCGATaGCACACTGCTGGAGACCTGTACCTGGGAAATGATGAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: KEEGVARRPGPDTGR*HTAGDLYLGNDEGR
Trigger: TCTGCCCTCATCATTTCCCAGGTACAGGTCTCCAGCAGTGTGCCATCGGCCGGTGTCAGGGCCAGGCCTTCTTGCCACTCCCTCCTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 90 bp CGAAGGACACTTGACAGAAGCACACTCGGCGACGGAGCTGTGCTCTaGGAGGACTCCGACGGCCTGGCAGTCCCCATAGTAATCGACTGC +
Preference number: 5 (lower is better)
Translates to: RRTLDRSTLGDGAVL*EDSDGLAVPIVIDC
Trigger: GCAGTCGATTACTATGGGGACTGCCAGGCCGTCGGAGTCCTCTCAGAGCACAGCTCCGTCGCCGAGTGTGCTTCTGTCAAGTGTCCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 90 bp GGTCTTGGAGGCCCACACAGCGAGCAATGCAGGCACTGGGGTAAGTaGGCCCATTCTGCCCACATACAGGGACAAACTGATCTGCACAGT +
Preference number: 5 (lower is better)
Translates to: GLGGPHSEQCRHWGK*AHSAHIQGQTDLHS
Trigger: ACTGTGCAGATCAGTTTGTCCCTGTATGTGGGCAGAATGGGCGCACTTACCCCAGTGCCTGCATTGCTCGCTGTGTGGGCCTCCAAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 90 bp CATAGTAATCGACTGCCACGCGATCCGAGTAGGCAGCACACACACTaGTGTAGGTCTCACCATTGTGCCCACATACGGGCTCGGTTGCTC +
Preference number: 5 (lower is better)
Translates to: HSNRLPRDPSRQHTH*CRSHHCAHIRARLL
Trigger: GAGCAACCGAGCCCGTATGTGGGCACAATGGTGAGACCTACAGCAGTGTGTGTGCTGCCTACTCGGATCGCGTGGCAGTCGATTACTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 90 bp ATCCAAACTCAAACTGATGGTCTTGGAGGCCCACACAGCGAGCAATaGAGGCACTGGGGTAAGTGCGCCCATTCTGCCCACATACAGGGA +
Preference number: 5 (lower is better)
Translates to: IQTQTDGLGGPHSEQ*RHWGKCAHSAHIQG
Trigger: TCCCTGTATGTGGGCAGAATGGGCGCACTTACCCCAGTGCCTGCATTGCTCGCTGTGTGGGCCTCCAAGACCATCAGTTTGAGTTTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 90 bp CAAACTGATGGTCTTGGAGGCCCACACAGCGAGCAATGCAGGCACTaGGGTAAGTGCGCCCATTCTGCCCACATACAGGGACAAACTGAT +
Preference number: 5 (lower is better)
Translates to: QTDGLGGPHSEQCRH*GKCAHSAHIQGQTD
Trigger: ATCAGTTTGTCCCTGTATGTGGGCAGAATGGGCGCACTTACCCCAGTGCCTGCATTGCTCGCTGTGTGGGCCTCCAAGACCATCAGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 90 bp CTGGAGACCTGTACCTGGGAAATGATGAGGGCAGAGAGAGGGACATaGGACGCCAAAGTCGGGCTGTCAGAGTTGATAAGGGACTCAATC +
Preference number: 5 (lower is better)
Translates to: LETCTWEMMRAERGT*DAKVGLSELIRDSI
Trigger: GATTGAGTCCCTTATCAACTCTGACAGCCCGACTTTGGCGTCCCATGTCCCTCTCTCTGCCCTCATCATTTCCCAGGTACAGGTCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 90 bp TTACAGGGCAGACCTGTGAAGGTACGACGGTCATCTTCTGAACTGTaGTCACTGAGGCAAAGGCGGGTAGAGCACACCAAATTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: LQGRPVKVRRSSSEL*SLRQRRVEHTKLPA
Trigger: TGCTGGCAATTTGGTGTGCTCTACCCGCCTTTGCCTCAGTGAGCACAGTTCAGAAGATGACCGTCGTACCTTCACAGGTCTGCCCTGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 90 bp TTTCAAGGCAGGAGAGTGAGGTGGAGGAGCATTCTGCACTTTCCGTaGGCAGTCAGTTATATGTCCAGAGCAAGTGCAAGGCAAGGCCCA +
Preference number: 5 (lower is better)
Translates to: FQGRRVRWRSILHFP*AVSYMSRASARQGP
Trigger: TGGGCCTTGCCTTGCACTTGCTCTGGACATATAACTGACTGCCCACGGAAAGTGCAGAATGCTCCTCCACCTCACTCTCCTGCCTTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 90 bp TGCACAGTTACAGGGCAGACCTGTGAAGGTACGACGGTCATCTTCTaGACTGTGCTCACTGAGGCAAAGGCGGGTAGAGCACACCAAATT +
Preference number: 5 (lower is better)
Translates to: CTVTGQTCEGTTVIF*TVLTEAKAGRAHQI
Trigger: AATTTGGTGTGCTCTACCCGCCTTTGCCTCAGTGAGCACAGTTCAGAAGATGACCGTCGTACCTTCACAGGTCTGCCCTGTAACTGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 90 bp CAGAGATTGTTGTGCTCCATGTGGTCTGTGTCACAAACAGGATCTTaGACCTGGTCACACGCGAGCTGTCTTGGTACACACTCATACTGG +
Preference number: 5 (lower is better)
Translates to: QRLLCSMWSVSQTGS*TWSHASCLGTHSYW
Trigger: CCAGTATGAGTGTGTACCAAGACAGCTCGCGTGTGACCAGGTCCAAGATCCTGTTTGTGACACAGACCACATGGAGCACAACAATCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 90 bp TTAGGATTACATGGATCCTTTGACATGCATGATCCAAACTCAAACTaGTGGTCTTGGAGGCCCACACAGCGAGCAATGCAGGCACTGGGG +
Preference number: 5 (lower is better)
Translates to: LGLHGSFDMHDPNSN*WSWRPTQRAMQALG
Trigger: CCCCAGTGCCTGCATTGCTCGCTGTGTGGGCCTCCAAGACCATCAGTTTGAGTTTGGATCATGCATGTCAAAGGATCCATGTAATCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 90 bp TTGTTGTGCTCCATGTGGTCTGTGTCACAAACAGGATCTTGGACCTaGTCACACGCGAGCTGTCTTGGTACACACTCATACTGGCTACAT +
Preference number: 5 (lower is better)
Translates to: LLCSMWSVSQTGSWT*SHASCLGTHSYWLH
Trigger: ATGTAGCCAGTATGAGTGTGTACCAAGACAGCTCGCGTGTGACCAGGTCCAAGATCCTGTTTGTGACACAGACCACATGGAGCACAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 90 bp CAAACCAGCAGTCCTGAATGTCTTTTTCAAGGCAGGAGAGTGAGGTaGAGGAGCATTCTGCACTTTCCGTGGGCAGTCAGTTATATGTCC +
Preference number: 5 (lower is better)
Translates to: QTSSPECLFQGRRVR*RSILHFPWAVSYMS
Trigger: GGACATATAACTGACTGCCCACGGAAAGTGCAGAATGCTCCTCCACCTCACTCTCCTGCCTTGAAAAAGACATTCAGGACTGCTGGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 90 bp GCCAAAGAGGATCTTGAGGCAAGGGCTGGGTCTTACAACCCTCGATaGGACCATCAACAATCTCCATTTCCGTTTTCTTGGACATCAGGA +
Preference number: 5 (lower is better)
Translates to: AKEDLEARAGSYNPR*DHQQSPFPFSWTSG
Trigger: TCCTGATGTCCAAGAAAACGGAAATGGAGATTGTTGATGGTCTCATCGAGGGTTGTAAGACCCAGCCCTTGCCTCAAGATCCTCTTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCTCAAACTGATGGTCTaGGAGGCCCACACAGCGAGC +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSLKLMV*EAHTAS
Trigger: GCTCGCTGTGTGGGCCTCCAAGACCATCAGTTTGAG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGGTGGGATGATGGGTTaGCATCCAGCTGCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSGGMMG*HPAAKS
Trigger: GCTCTTGGCAGCTGGATGCAAACCCATCATCCCACC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 90 bp GTGCAGAGTTCCCTACATGTTGAAGTGTTTGCTTTAGAACAACAATaGAATTTAGCCCCATCGAGGCCTGTAGAGGGAGGAGGGTGTACA +
Preference number: 5 (lower is better)
Translates to: VQSSLHVEVFALEQQ*NLAPSRPVEGGGCT
Trigger: TGTACACCCTCCTCCCTCTACAGGCCTCGATGGGGCTAAATTGCATTGTTGTTCTAAAGCAAACACTTCAACATGTAGGGAACTCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCACACGCGAGCTGTCTaGGTACACACTCATACTGGC +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSHTRAV*VHTHTG
Trigger: GCCAGTATGAGTGTGTACCAAGACAGCTCGCGTGTG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGTCACAAACAGGATCTaGGACCTGGTCACACGCGAG +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSVTNRI*DLVTRE
Trigger: CTCGCGTGTGACCAGGTCCAAGATCCTGTTTGTGAC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAAGAGCGAAGGACACTaGACAGAAGCACACTCGGCG +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSKSEGH*TEAHSA
Trigger: CGCCGAGTGTGCTTCTGTCAAGTGTCCTTCGCTCTT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 90 bp CGCCAAAGTCGGGCTGTCAGAGTTGATAAGGGACTCAATCTTCTCTaGTTCTTTATTGCAGGCTTCAATCTGCAGAGCTTTTGGATAGTG +
Preference number: 5 (lower is better)
Translates to: RQSRAVRVDKGLNLL*FFIAGFNLQSFWIV
Trigger: CACTATCCAAAAGCTCTGCAGATTGAAGCCTGCAATAAAGAAGCAGAGAAGATTGAGTCCCTTATCAACTCTGACAGCCCGACTTTGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 90 bp AGCCCAACTGGCAAGGTTCCCGGACATCCGCTAAACAGGTCAACATaGACACTTCCACTGGATTATATTCACAAAAGCGATCAAACTCTT +
Preference number: 5 (lower is better)
Translates to: SPTGKVPGHPLNRST*TLPLDYIHKSDQTL
Trigger: AAGAGTTTGATCGCTTTTGTGAATATAATCCAGTGGAAGTGTCCATGTTGACCTGTTTAGCGGATGTCCGGGAACCTTGCCAGTTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTTTGAAGATGCCTGCTaGCATGCCTGTCGACACTCC +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSFEDAC*HACRHS
Trigger: GGAGTGTCGACAGGCATGCAAGCAGGCATCTTCAAA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTTGCCAAAGAGGATCTaGAGGCAAGGGCTGGGTCTT +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSLPKRI*RQGLGL
Trigger: AAGACCCAGCCCTTGCCTCAAGATCCTCTTTGGCAA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTGGCAGGGCAAGGATTaGGGTTACAGGGATGAGTCA +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSWQGKD*GYRDES
Trigger: TGACTCATCCCTGTAACCCAAATCCTTGCCCTGCCA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTACTTCACAGAGCTCATaGGCAGGGCAAGGATTTGGG +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSTSQSS*AGQGFG
Trigger: CCCAAATCCTTGCCCTGCCAATGAGCTCTGTGAAGT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 90 bp GGCAGGGACCTTTGTAAGAGAGGCTTTTTCCTCTTTGGTATAAAGTaGAGAGATTGTTGTGCTCCATGTGGTCTGTGTCACAAACAGGAT +
Preference number: 5 (lower is better)
Translates to: GRDLCKRGFFLFGIK*RDCCAPCGLCHKQD
Trigger: ATCCTGTTTGTGACACAGACCACATGGAGCACAACAATCTCTGCACTTTATACCAAAGAGGAAAAAGCCTCTCTTACAAAGGTCCCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTCTCTTGCAGGCATTTaGGCAAGCATGGTCTTCAGC +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSSLAGI*ASMVFS
Trigger: GCTGAAGACCATGCTTGCCAAAATGCCTGCAAGAGA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAGGCAGACCTGTGGTTaGGGTATGCACCTTTGGTTT +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSRQTCG*GMHLWF
Trigger: AAACCAAAGGTGCATACCCAAACCACAGGTCTGCCT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGTCGGGCTGTCAGAGTaGATAAGGGACTCAATCTTC +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSVGLSE*IRDSIF
Trigger: GAAGATTGAGTCCCTTATCAACTCTGACAGCCCGAC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 90 bp CATCAACAATCTCCATTTCCGTTTTCTTGGACATCAGGATTCTCTTaGAGGCATTTTGGCAAGCATGGTCTTCAGCTCTGTCACAGCAAT +
Preference number: 5 (lower is better)
Translates to: HQQSPFPFSWTSGFS*RHFGKHGLQLCHSN
Trigger: ATTGCTGTGACAGAGCTGAAGACCATGCTTGCCAAAATGCCTGCAAGAGAATCCTGATGTCCAAGAAAACGGAAATGGAGATTGTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 90 bp CTGCTTTTATCTGAGATGGACCAGGAGAAGAGTCTGTTCGAAAAATaGCTTGACAGTATTCTCGGCAGTTTGTGTGATGACCTGCATAAC +
Preference number: 5 (lower is better)
Translates to: LLLSEMDQEKSLFEK*LDSILGSLCDDLHN
Trigger: GTTATGCAGGTCATCACACAAACTGCCGAGAATACTGTCAAGCCATTTTTCGAACAGACTCTTCTCCTGGTCCATCTCAGATAAAAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377966.4
ENST00000475774.5
ENST00000479053.1
CDS CCA 90 bp GTTTTCTTGGACATCAGGATTCTCTTGCAGGCATTTTGGCAAGCATaGTCTTCAGCTCTGTCACAGCAATATAAACTATCCGTTGGGTTC +
Preference number: 5 (lower is better)
Translates to: VFLDIRILLQAFWQA*SSALSQQYKLSVGF
Trigger: GAACCCAACGGATAGTTTATATTGCTGTGACAGAGCTGAAGACCATGCTTGCCAAAATGCCTGCAAGAGAATCCTGATGTCCAAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGCAGTGAACAAGCTATaGCTTTCCACATCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSAVNKL*LSTSLA
Trigger: AGCCAGAGATGTGGAAAGCAATAGCTTGTTCACTGC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAAAGTGCAGAGATTGTaGTGCTCCATGTGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSKVQRL*CSMWSV
Trigger: CACAGACCACATGGAGCACAACAATCTCTGCACTTT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCAATCTGCAGAGCTTTaGGATAGTGATCGACGGGAA +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSQSAEL*DSDRRE
Trigger: TTCCCGTCGATCACTATCCAAAAGCTCTGCAGATTG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 90 bp TTTATGCTTCCTTTCTCCCACAACTTCATGTCATTCATGGCTCCTTaGTCTGACTGTGCATTACAACTCCTGAAAAGTTCTGTTGGCCTG +
Preference number: 5 (lower is better)
Translates to: FMLPFSHNFMSFMAP*SDCALQLLKSSVGL
Trigger: CAGGCCAACAGAACTTTTCAGGAGTTGTAATGCACAGTCAGATCAAGGAGCCATGAATGACATGAAGTTGTGGGAGAAAGGAAGCATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 90 bp TCCATTTCCGTTTTCTTGGACATCAGGATTCTCTTGCAGGCATTTTaGCAAGCATGGTCTTCAGCTCTGTCACAGCAATATAAACTATCC +
Preference number: 5 (lower is better)
Translates to: SISVFLDIRILLQAF*QAWSSALSQQYKLS
Trigger: GGATAGTTTATATTGCTGTGACAGAGCTGAAGACCATGCTTGCCAAAATGCCTGCAAGAGAATCCTGATGTCCAAGAAAACGGAAATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAGTATTCTCGGCAGTTaGTGTGATGACCTGCATAAC +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSSILGS*CDDLHN
Trigger: GTTATGCAGGTCATCACACAAACTGCCGAGAATACT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAAAGCGATCAAACTCTaGCCAACTCTGTGTATTGCC +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSKAIKL*PTLCIA
Trigger: GGCAATACACAGAGTTGGCAAGAGTTTGATCGCTTT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGTAGAGCACACCAAATaGCCAGCAAAACAAGAACAG +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSVEHTK*PAKQEQ
Trigger: CTGTTCTTGTTTTGCTGGCAATTTGGTGTGCTCTAC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 90 bp AGCTTTTGGATAGTGATCGACGGGAATGATCAGGATCACAATTTCTaGTTCAATGCTGAAGTATCCAAACACATCACACTGTGGGACAGA +
Preference number: 5 (lower is better)
Translates to: SFWIVIDGNDQDHNF*FNAEVSKHITLWDR
Trigger: TCTGTCCCACAGTGTGATGTGTTTGGATACTTCAGCATTGAATCAGAAATTGTGATCCTGATCATTCCCGTCGATCACTATCCAAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 90 bp AATGTCAGAGAGCACAGATCTGCCTTTAAAACAAATGAAGGTTATTaGGGCAATGCTTCATCCTCTGATTTTGACCACACAGCTACACCA +
Preference number: 5 (lower is better)
Translates to: NVREHRSAFKTNEGY*GNASSSDFDHTATP
Trigger: TGGTGTAGCTGTGTGGTCAAAATCAGAGGATGAAGCATTGCCCCAATAACCTTCATTTGTTTTAAAGGCAGATCTGTGCTCTCTGACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479053.1
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGTCGGGATTCACTTTTaGAGGAGAAAATCTGTTCAC +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSVGIHF*RRKSVH
Trigger: GTGAACAGATTTTCTCCTCAAAAAGTGAATCCCGAC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTGTTCGAAAAATGGCTaGACAGTATTCTCGGCAGTT +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSCSKNG*TVFSAV
Trigger: AACTGCCGAGAATACTGTCAAGCCATTTTTCGAACA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTCCATTTCCGTTTTCTaGGACATCAGGATTCTCTTG +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSSISVF*DIRILL
Trigger: CAAGAGAATCCTGATGTCCAAGAAAACGGAAATGGA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGCTTTCAAGAAAACATaGCCAAAGAGGATCTTGAGG +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSAFKKT*PKRILR
Trigger: CCTCAAGATCCTCTTTGGCAATGTTTTCTTGAAAGC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTGGTCTTCAGGGAATTaGTTCTGGTCTCCACATTTT +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSWSSGN*FWSPHF
Trigger: AAAATGTGGAGACCAGAACAAATTCCCTGAAGACCA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTCCCAGTTTGCAACCTaGAACACAAAAGTATGGAAG +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSSQFAT*NTKVWK
Trigger: CTTCCATACTTTTGTGTTCAAGGTTGCAAACTGGGA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTATAAAGTGCAGAGATaGTTGTGCTCCATGTGGTCT +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSYKVQR*LCSMWS
Trigger: AGACCACATGGAGCACAACAATCTCTGCACTTTATA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTTCTCTGCTTCTTTATaGCAGGCTTCAATCTGCAGA +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSFSASL*QASICR
Trigger: TCTGCAGATTGAAGCCTGCAATAAAGAAGCAGAGAA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTGACATGTGCCTTTCCTaGGCCAATATTCAACTACAA +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSDMCLS*ANIQLQ
Trigger: TTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTC...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 90 bp GAGGTATGTATCCAAAGGTATACAATTCTTCAGATCATCTGTAGGTaGCAGAAGCTCACAAATACTTTCAGCTGTGTGGTCTTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: EVCIQRYTILQIICR*QKLTNTFSCVVFRE
Trigger: TTCCCTGAAGACCACACAGCTGAAAGTATTTGTGAGCTTCTGTCACCTACAGATGATCTGAAGAATTGTATACCTTTGGATACATACCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 90 bp GAAGTAGTTTTCTCTGACTTTGGAAGAAATCTGTGCATATCTGTTTaGCGCCTTCTTTTCCAGATTCCTCTGTATTGGCAAAGATGGAGA +
Preference number: 5 (lower is better)
Translates to: EVVFSDFGRNLCISV*RLLFQIPLYWQRWR
Trigger: TCTCCATCTTTGCCAATACAGAGGAATCTGGAAAAGAAGGCGCCAAACAGATATGCACAGATTTCTTCCAAAGTCAGAGAAAACTACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475774.5
ENST00000479053.1
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTCCAAATTTCAACCATaGTCTCTGGGCAATAATCTG +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSSKFQP*SLGNNL
Trigger: CAGATTATTGCCCAGAGACAATGGTTGAAATTTGGA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTCCGTTGGGTTCCTCATaGGATAAGATTGAGTATAAT +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSPLGSS*DKIEYN
Trigger: ATTATACTCAATCTTATCCAATGAGGAACCCAACGG...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTCCACACAATCTGATTaGCAAATAATACTTCCCCGA +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSSTQSD*QIILPR
Trigger: TCGGGGAAGTATTATTTGCAAATCAGATTGTGTGGA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTTTAATCAGCTTGCTTTaGCATAACACAGTAGTTGGG +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSLISLL*HNTVVG
Trigger: CCCAACTACTGTGTTATGCAAAAGCAAGCTGATTAA...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTATAATGCAAGATGCTTaGATGCAATGTCACTTCTCC +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSIMQDA*MQCHFS
Trigger: GGAGAAGTGACATTGCATCAAAGCATCTTGCATTAT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS-3UTR CAA 90 bp AATAGAGGTGACATGTGCCTTTCCTTGGCCAATATTCAACTACAAACCAGCAGTAATATAAACTATCCGTaGGGTTCCTCATTGGATAAG +
Preference number: 5 (lower is better)
Translates to: NRGDMCLSLANIQLQTSSNINYP*GSSLDK
Trigger: CTTATCCAATGAGGAACCCAACGGATAGTTTATATT...ACTGCTGGTTTGTAGTTGAATATTGGCCAAGGAAAGGCACATGTCACCTCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 90 bp AATAATACTTCCCCGAGATTTACTATGACAAGGTTTAATCTGCAGTaGACAAGCTATTGCTTTCCACATCTCTGGCTGGCACTTTTTAAT +
Preference number: 5 (lower is better)
Translates to: NNTSPRFTMTRFNLQ*TSYCFPHLWLALFN
Trigger: ATTAAAAAGTGCCAGCCAGAGATGTGGAAAGCAATAGCTTGTTCACTGCAGATTAAACCTTGTCATAGTAAATCTCGGGGAAGTATTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 90 bp TCCACACAATCTGATTTGCAAATAATACTTCCCCGAGATTTACTATaGCAAGGTTTAATCTGCAGTGAACAAGCTATTGCTTTCCACATC +
Preference number: 5 (lower is better)
Translates to: STQSDLQIILPRDLL*QGLICSEQAIAFHI
Trigger: GATGTGGAAAGCAATAGCTTGTTCACTGCAGATTAAACCTTGTCATAGTAAATCTCGGGGAAGTATTATTTGCAAATCAGATTGTGTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 90 bp TTTCTTTTTCCTCCAACAATACAAGACTTCTGGAGGTCTATACAGTaGATTTCCATACAGTTTTCTAAGAGTCCACTTTGTCCACATGAA +
Preference number: 5 (lower is better)
Translates to: FLFPPTIQDFWRSIQ*ISIQFSKSPLCPHE
Trigger: TTCATGTGGACAAAGTGGACTCTTAGAAAACTGTATGGAAATGCACTGTATAGACCTCCAGAAGTCTTGTATTGTTGGAGGAAAAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 72 bp GGACACTTGACAGAAGCACACTCGGCGACGGAGCTGTaGTCTGAGAGGACTCCGACGGCCTGGCAGTCCCCA +
Preference number: 6 (lower is better)
Translates to: GHLTEAHSATEL*SERTPTAWQSP
Trigger: TGGGGACTGCCAGGCCGTCGGAGTCCTCTCAGAGCACAGCTCCGTCGCCGAGTGTGCTTCTGTCAAGTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 72 bp CTTGACAGAAGCACACTCGGCGACGGAGCTGTGCTCTaGGAGGACTCCGACGGCCTGGCAGTCCCCATAGTA +
Preference number: 6 (lower is better)
Translates to: LDRSTLGDGAVL*EDSDGLAVPIV
Trigger: TACTATGGGGACTGCCAGGCCGTCGGAGTCCTCTCAGAGCACAGCTCCGTCGCCGAGTGTGCTTCTGTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 72 bp GACTCCGACGGCCTGGCAGTCCCCATAGTAATCGACTaGCACGCGATCCGAGTAGGCAGCACACACACTGCT +
Preference number: 6 (lower is better)
Translates to: DSDGLAVPIVID*HAIRVGSTHTA
Trigger: AGCAGTGTGTGTGCTGCCTACTCGGATCGCGTGGCAGTCGATTACTATGGGGACTGCCAGGCCGTCGGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 72 bp GGTCTTGGAGGCCCACACAGCGAGCAATGCAGGCACTaGGGTAAGTGCGCCCATTCTGCCCACATACAGGGA +
Preference number: 6 (lower is better)
Translates to: GLGGPHSEQCRH*GKCAHSAHIQG
Trigger: TCCCTGTATGTGGGCAGAATGGGCGCACTTACCCCAGTGCCTGCATTGCTCGCTGTGTGGGCCTCCAAGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 72 bp GGAGTGGCAAGAAGGCCTGGCCCTGACACCGGCCGATaGCACACTGCTGGAGACCTGTACCTGGGAAATGAT +
Preference number: 6 (lower is better)
Translates to: GVARRPGPDTGR*HTAGDLYLGND
Trigger: ATCATTTCCCAGGTACAGGTCTCCAGCAGTGTGCCATCGGCCGGTGTCAGGGCCAGGCCTTCTTGCCACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 72 bp CAAACTGATGGTCTTGGAGGCCCACACAGCGAGCAATaGAGGCACTGGGGTAAGTGCGCCCATTCTGCCCAC +
Preference number: 6 (lower is better)
Translates to: QTDGLGGPHSEQ*RHWGKCAHSAH
Trigger: GTGGGCAGAATGGGCGCACTTACCCCAGTGCCTGCATTGCTCGCTGTGTGGGCCTCCAAGACCATCAGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 72 bp CGACTGCCACGCGATCCGAGTAGGCAGCACACACACTaGTGTAGGTCTCACCATTGTGCCCACATACGGGCT +
Preference number: 6 (lower is better)
Translates to: RLPRDPSRQHTH*CRSHHCAHIRA
Trigger: AGCCCGTATGTGGGCACAATGGTGAGACCTACAGCAGTGTGTGTGCTGCCTACTCGGATCGCGTGGCAGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 90 bp GGTGGGATGATGGGTTTGCATCCAGCTGCCAAGAGCGAAGGACACTaGACAGAAGCACACTCGGCGACGGAGCTGTGCTCTGAGAGGACT +
Preference number: 6 (lower is better)
Translates to: GGMMGLHPAAKSEGH*TEAHSATELCSERT
Trigger: AGTCCTCTCAGAGCACAGCTCCGTCGCCGAGTGTGCTTCTGTCAAGTGTCCTTCGCTCTTGGCAGCTGGATGCAAACCCATCATCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 72 bp GGCCCACACAGCGAGCAATGCAGGCACTGGGGTAAGTaGGCCCATTCTGCCCACATACAGGGACAAACTGAT +
Preference number: 6 (lower is better)
Translates to: GPHSEQCRHWGK*AHSAHIQGQTD
Trigger: ATCAGTTTGTCCCTGTATGTGGGCAGAATGGGCGCACTTACCCCAGTGCCTGCATTGCTCGCTGTGTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 72 bp ATGGGTTTGCATCCAGCTGCCAAGAGCGAAGGACACTaGACAGAAGCACACTCGGCGACGGAGCTGTGCTCT +
Preference number: 6 (lower is better)
Translates to: MGLHPAAKSEGH*TEAHSATELCS
Trigger: AGAGCACAGCTCCGTCGCCGAGTGTGCTTCTGTCAAGTGTCCTTCGCTCTTGGCAGCTGGATGCAAACCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 72 bp ACAGGGCAGACCTGTGAAGGTACGACGGTCATCTTCTaGACTGTGCTCACTGAGGCAAAGGCGGGTAGAGCA +
Preference number: 6 (lower is better)
Translates to: TGQTCEGTTVIF*TVLTEAKAGRA
Trigger: TGCTCTACCCGCCTTTGCCTCAGTGAGCACAGTTCAGAAGATGACCGTCGTACCTTCACAGGTCTGCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 72 bp GCGCCCATTCTGCCCACATACAGGGACAAACTGATCTaGACAGTTACAGGGCAGACCTGTGAAGGTACGACG +
Preference number: 6 (lower is better)
Translates to: APILPTYRDKLI*TVTGQTCEGTT
Trigger: CGTCGTACCTTCACAGGTCTGCCCTGTAACTGTGCAGATCAGTTTGTCCCTGTATGTGGGCAGAATGGGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 72 bp GTAGGTCTCACCATTGTGCCCACATACGGGCTCGGTTaGTCTGCAAAAGGGCTGGCAGGGACCTTTGTAAGA +
Preference number: 6 (lower is better)
Translates to: VGLTIVPTYGLG*SAKGLAGTFVR
Trigger: TCTTACAAAGGTCCCTGCCAGCCCTTTTGCAGAGCAACCGAGCCCGTATGTGGGCACAATGGTGAGACCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 72 bp ACAAGCACCCGGTGGGATGATGGGTTTGCATCCAGCTaGCAAGAGCGAAGGACACTTGACAGAAGCACACTC +
Preference number: 6 (lower is better)
Translates to: TSTRWDDGFASS*QERRTLDRSTL
Trigger: GAGTGTGCTTCTGTCAAGTGTCCTTCGCTCTTGGCAGCTGGATGCAAACCCATCATCCCACCGGGTGCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 72 bp TGTAGGTCTCACCATTGTGCCCACATACGGGCTCGGTaGCTCTGCAAAAGGGCTGGCAGGGACCTTTGTAAG +
Preference number: 6 (lower is better)
Translates to: CRSHHCAHIRAR*LCKRAGRDLCK
Trigger: CTTACAAAGGTCCCTGCCAGCCCTTTTGCAGAGCAACCGAGCCCGTATGTGGGCACAATGGTGAGACCTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 72 bp CATAATGGGCAACAAGCACCCGGTGGGATGATGGGTTaGCATCCAGCTGCCAAGAGCGAAGGACACTTGACA +
Preference number: 6 (lower is better)
Translates to: HNGQQAPGGMMG*HPAAKSEGHLT
Trigger: TGTCAAGTGTCCTTCGCTCTTGGCAGCTGGATGCAAACCCATCATCCCACCGGGTGCTTGTTGCCCATTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 72 bp AGACCTGTGAAGGTACGACGGTCATCTTCTGAACTGTaGTCACTGAGGCAAAGGCGGGTAGAGCACACCAAA +
Preference number: 6 (lower is better)
Translates to: RPVKVRRSSSEL*SLRQRRVEHTK
Trigger: TTTGGTGTGCTCTACCCGCCTTTGCCTCAGTGAGCACAGTTCAGAAGATGACCGTCGTACCTTCACAGGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 72 bp TTGTGCTCCATGTGGTCTGTGTCACAAACAGGATCTTaGACCTGGTCACACGCGAGCTGTCTTGGTACACAC +
Preference number: 6 (lower is better)
Translates to: LCSMWSVSQTGS*TWSHASCLGTH
Trigger: GTGTGTACCAAGACAGCTCGCGTGTGACCAGGTCCAAGATCCTGTTTGTGACACAGACCACATGGAGCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 72 bp AGGAGAGTGAGGTGGAGGAGCATTCTGCACTTTCCGTaGGCAGTCAGTTATATGTCCAGAGCAAGTGCAAGG +
Preference number: 6 (lower is better)
Translates to: RRVRWRSILHFP*AVSYMSRASAR
Trigger: CCTTGCACTTGCTCTGGACATATAACTGACTGCCCACGGAAAGTGCAGAATGCTCCTCCACCTCACTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 72 bp GTTGTGCTCCATGTGGTCTGTGTCACAAACAGGATCTaGGACCTGGTCACACGCGAGCTGTCTTGGTACACA +
Preference number: 6 (lower is better)
Translates to: VVLHVVCVTNRI*DLVTRELSWYT
Trigger: TGTGTACCAAGACAGCTCGCGTGTGACCAGGTCCAAGATCCTGTTTGTGACACAGACCACATGGAGCACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 90 bp GCAGAGATTGTTGTGCTCCATGTGGTCTGTGTCACAAACAGGATCTaGGACCTGGTCACACGCGAGCTGTCTTGGTACACACTCATACTG +
Preference number: 6 (lower is better)
Translates to: AEIVVLHVVCVTNRI*DLVTRELSWYTLIL
Trigger: CAGTATGAGTGTGTACCAAGACAGCTCGCGTGTGACCAGGTCCAAGATCCTGTTTGTGACACAGACCACATGGAGCACAACAATCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 90 bp AGGGCAGAGAGAGGGACATGGGACGCCAAAGTCGGGCTGTCAGAGTaGATAAGGGACTCAATCTTCTCTGCTTCTTTATTGCAGGCTTCA +
Preference number: 6 (lower is better)
Translates to: RAERGTWDAKVGLSE*IRDSIFSASLLQAS
Trigger: TGAAGCCTGCAATAAAGAAGCAGAGAAGATTGAGTCCCTTATCAACTCTGACAGCCCGACTTTGGCGTCCCATGTCCCTCTCTCTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 72 bp TCCATGTGGTCTGTGTCACAAACAGGATCTTGGACCTaGTCACACGCGAGCTGTCTTGGTACACACTCATAC +
Preference number: 6 (lower is better)
Translates to: SMWSVSQTGSWT*SHASCLGTHSY
Trigger: GTATGAGTGTGTACCAAGACAGCTCGCGTGTGACCAGGTCCAAGATCCTGTTTGTGACACAGACCACATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 72 bp TCCCCTGCAGATGATGGCACCTGGATTAGTGTCCCTTaGCGGACAATGAAATCAGAAGCTTCTCCCAGTTTG +
Preference number: 6 (lower is better)
Translates to: SPADDGTWISVP*RTMKSEASPSL
Trigger: CAAACTGGGAGAAGCTTCTGATTTCATTGTCCGTCAAGGGACACTAATCCAGGTGCCATCATCTGCAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 72 bp CATGGATCCTTTGACATGCATGATCCAAACTCAAACTaGTGGTCTTGGAGGCCCACACAGCGAGCAATGCAG +
Preference number: 6 (lower is better)
Translates to: HGSFDMHDPNSN*WSWRPTQRAMQ
Trigger: CTGCATTGCTCGCTGTGTGGGCCTCCAAGACCATCAGTTTGAGTTTGGATCATGCATGTCAAAGGATCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 72 bp GATCTTGAGGCAAGGGCTGGGTCTTACAACCCTCGATaGGACCATCAACAATCTCCATTTCCGTTTTCTTGG +
Preference number: 6 (lower is better)
Translates to: DLEARAGSYNPR*DHQQSPFPFSW
Trigger: CCAAGAAAACGGAAATGGAGATTGTTGATGGTCTCATCGAGGGTTGTAAGACCCAGCCCTTGCCTCAAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 72 bp AGAAAATGGATTCCAGGATGTACAAAGCGGAGACTCTaGAGAGCCATTTCAGGTGCAGCTTCATCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: RKWIPGCTKRRL*RAISGAASSGG
Trigger: GCCTCCTGATGAAGCTGCACCTGAAATGGCTCTTCAGAGTCTCCGCTTTGTACATCCTGGAATCCATTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479053.1
CDS CAA 72 bp AGAGGGACATGGGACGCCAAAGTCGGGCTGTCAGAGTaGATAAGGGACTCAATCTTCTCTGCTTCTTTATTG +
Preference number: 6 (lower is better)
Translates to: RGTWDAKVGLSE*IRDSIFSASLL
Trigger: CAATAAAGAAGCAGAGAAGATTGAGTCCCTTATCAACTCTGACAGCCCGACTTTGGCGTCCCATGTCCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 72 bp CTGTTCACATACATCACGGCACATTTGGTTATCCTTTaGATGATTACAACACAATGCACCCGCACTGCCCGG +
Preference number: 6 (lower is better)
Translates to: LFTYITAHLVIL*MITTQCTRTAR
Trigger: CCGGGCAGTGCGGGTGCATTGTGTTGTAATCATTCAAAGGATAACCAAATGTGCCGTGATGTATGTGAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377966.4
ENST00000475774.5
ENST00000479053.1
CDS CCA 72 bp GGCAAGGTTCCCGGACATCCGCTAAACAGGTCAACATaGACACTTCCACTGGATTATATTCACAAAAGCGAT +
Preference number: 6 (lower is better)
Translates to: GKVPGHPLNRST*TLPLDYIHKSD
Trigger: ATCGCTTTTGTGAATATAATCCAGTGGAAGTGTCCATGTTGACCTGTTTAGCGGATGTCCGGGAACCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 72 bp AACAGGATCTTGGACCTGGTCACACGCGAGCTGTCTTaGTACACACTCATACTGGCTACATCCAAATTTATC +
Preference number: 6 (lower is better)
Translates to: NRILDLVTRELS*YTLILATSKFI
Trigger: GATAAATTTGGATGTAGCCAGTATGAGTGTGTACCAAGACAGCTCGCGTGTGACCAGGTCCAAGATCCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 72 bp AGATGGACCAGGAGAAGAGTCTGTTCGAAAAATGGCTaGACAGTATTCTCGGCAGTTTGTGTGATGACCTGC +
Preference number: 6 (lower is better)
Translates to: RWTRRRVCSKNG*TVFSAVCVMTC
Trigger: GCAGGTCATCACACAAACTGCCGAGAATACTGTCAAGCCATTTTTCGAACAGACTCTTCTCCTGGTCCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377966.4
ENST00000475774.5
ENST00000479053.1
CDS CAA 72 bp TGCTCACTGAGGCAAAGGCGGGTAGAGCACACCAAATaGCCAGCAAAACAAGAACAGACATTGCAGTCAATA +
Preference number: 6 (lower is better)
Translates to: CSLRQRRVEHTK*PAKQEQTLQSI
Trigger: TATTGACTGCAATGTCTGTTCTTGTTTTGCTGGCAATTTGGTGTGCTCTACCCGCCTTTGCCTCAGTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 90 bp CCATCAACAATCTCCATTTCCGTTTTCTTGGACATCAGGATTCTCTaGCAGGCATTTTGGCAAGCATGGTCTTCAGCTCTGTCACAGCAA +
Preference number: 6 (lower is better)
Translates to: PSTISISVFLDIRIL*QAFWQAWSSALSQQ
Trigger: TTGCTGTGACAGAGCTGAAGACCATGCTTGCCAAAATGCCTGCAAGAGAATCCTGATGTCCAAGAAAACGGAAATGGAGATTGTTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 90 bp TCTGAACTGTGCTCACTGAGGCAAAGGCGGGTAGAGCACACCAAATaGCCAGCAAAACAAGAACAGACATTGCAGTCAATACTAAAGGAT +
Preference number: 6 (lower is better)
Translates to: SELCSLRQRRVEHTK*PAKQEQTLQSILKD
Trigger: ATCCTTTAGTATTGACTGCAATGTCTGTTCTTGTTTTGCTGGCAATTTGGTGTGCTCTACCCGCCTTTGCCTCAGTGAGCACAGTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 72 bp ATGATGGCACCTGGATTAGTGTCCCTTGACGGACAATaGAATCAGAAGCTTCTCCCAGTTTGCAACCTTGAA +
Preference number: 6 (lower is better)
Translates to: MMAPGLVSLDGQ*NQKLLPVCNLE
Trigger: TTCAAGGTTGCAAACTGGGAGAAGCTTCTGATTTCATTGTCCGTCAAGGGACACTAATCCAGGTGCCATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS GCA 72 bp GGCTTGACAGTATTCTCGGCAGTTTGTGTGATGACCTaGATAACTGCAACAAACCGAGCCCATTTCATTTCT +
Preference number: 6 (lower is better)
Translates to: GLTVFSAVCVMT*ITATNRAHFIS
Trigger: AGAAATGAAATGGGCTCGGTTTGTTGCAGTTATGCAGGTCATCACACAAACTGCCGAGAATACTGTCAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377966.4
ENST00000475774.5
ENST00000479053.1
CDS GCA 72 bp TCTCCATTTCCGTTTTCTTGGACATCAGGATTCTCTTaGAGGCATTTTGGCAAGCATGGTCTTCAGCTCTGT +
Preference number: 6 (lower is better)
Translates to: SPFPFSWTSGFS*RHFGKHGLQLC
Trigger: ACAGAGCTGAAGACCATGCTTGCCAAAATGCCTGCAAGAGAATCCTGATGTCCAAGAAAACGGAAATGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 72 bp CGTTTTCTTGGACATCAGGATTCTCTTGCAGGCATTTaGGCAAGCATGGTCTTCAGCTCTGTCACAGCAATA +
Preference number: 6 (lower is better)
Translates to: RFLGHQDSLAGI*ASMVFSSVTAI
Trigger: TATTGCTGTGACAGAGCTGAAGACCATGCTTGCCAAAATGCCTGCAAGAGAATCCTGATGTCCAAGAAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 72 bp ATCTCCATTTCCGTTTTCTTGGACATCAGGATTCTCTaGCAGGCATTTTGGCAAGCATGGTCTTCAGCTCTG +
Preference number: 6 (lower is better)
Translates to: ISISVFLDIRIL*QAFWQAWSSAL
Trigger: CAGAGCTGAAGACCATGCTTGCCAAAATGCCTGCAAGAGAATCCTGATGTCCAAGAAAACGGAAATGGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 72 bp GGTTTACTTCACAGAGCTCATTGGCAGGGCAAGGATTaGGGTTACAGGGATGAGTCACTTCTTCTACAATGT +
Preference number: 6 (lower is better)
Translates to: GLLHRAHWQGKD*GYRDESLLLQC
Trigger: ACATTGTAGAAGAAGTGACTCATCCCTGTAACCCAAATCCTTGCCCTGCCAATGAGCTCTGTGAAGTAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 72 bp AAACAGGATCTTGGACCTGGTCACACGCGAGCTGTCTaGGTACACACTCATACTGGCTACATCCAAATTTAT +
Preference number: 6 (lower is better)
Translates to: KQDLGPGHTRAV*VHTHTGYIQIY
Trigger: ATAAATTTGGATGTAGCCAGTATGAGTGTGTACCAAGACAGCTCGCGTGTGACCAGGTCCAAGATCCTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 90 bp GAGAAGAGTCTGTTCGAAAAATGGCTTGACAGTATTCTCGGCAGTTaGTGTGATGACCTGCATAACTGCAACAAACCGAGCCCATTTCAT +
Preference number: 6 (lower is better)
Translates to: EKSLFEKWLDSILGS*CDDLHNCNKPSPFH
Trigger: ATGAAATGGGCTCGGTTTGTTGCAGTTATGCAGGTCATCACACAAACTGCCGAGAATACTGTCAAGCCATTTTTCGAACAGACTCTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377966.4
ENST00000475774.5
ENST00000479053.1
CDS TCA 72 bp TCCCCGAGATTTACTATGACAAGGTTTAATCTGCAGTaGACAAGCTATTGCTTTCCACATCTCTGGCTGGCA +
Preference number: 6 (lower is better)
Translates to: SPRFTMTRFNLQ*TSYCFPHLWLA
Trigger: TGCCAGCCAGAGATGTGGAAAGCAATAGCTTGTTCACTGCAGATTAAACCTTGTCATAGTAAATCTCGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 72 bp GTTTTCTTGGACATCAGGATTCTCTTGCAGGCATTTTaGCAAGCATGGTCTTCAGCTCTGTCACAGCAATAT +
Preference number: 6 (lower is better)
Translates to: VFLDIRILLQAF*QAWSSALSQQY
Trigger: ATATTGCTGTGACAGAGCTGAAGACCATGCTTGCCAAAATGCCTGCAAGAGAATCCTGATGTCCAAGAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 72 bp GTTTACTTCACAGAGCTCATTGGCAGGGCAAGGATTTaGGTTACAGGGATGAGTCACTTCTTCTACAATGTT +
Preference number: 6 (lower is better)
Translates to: VYFTELIGRARI*VTGMSHFFYNV
Trigger: AACATTGTAGAAGAAGTGACTCATCCCTGTAACCCAAATCCTTGCCCTGCCAATGAGCTCTGTGAAGTAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 72 bp GAGAGGCTTTTTCCTCTTTGGTATAAAGTGCAGAGATaGTTGTGCTCCATGTGGTCTGTGTCACAAACAGGA +
Preference number: 6 (lower is better)
Translates to: ERLFPLWYKVQR*LCSMWSVSQTG
Trigger: TCCTGTTTGTGACACAGACCACATGGAGCACAACAATCTCTGCACTTTATACCAAAGAGGAAAAAGCCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 72 bp ATGAAGGTTATTGGGGCAATGCTTCATCCTCTGATTTaGACCACACAGCTACACCAAAGGATGTCAAAAGCC +
Preference number: 6 (lower is better)
Translates to: MKVIGAMLHPLI*TTQLHQRMSKA
Trigger: GGCTTTTGACATCCTTTGGTGTAGCTGTGTGGTCAAAATCAGAGGATGAAGCATTGCCCCAATAACCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479053.1
CDS CAA 90 bp TTTTATCTGAGATGGACCAGGAGAAGAGTCTGTTCGAAAAATGGCTaGACAGTATTCTCGGCAGTTTGTGTGATGACCTGCATAACTGCA +
Preference number: 6 (lower is better)
Translates to: FYLRWTRRRVCSKNG*TVFSAVCVMTCITA
Trigger: TGCAGTTATGCAGGTCATCACACAAACTGCCGAGAATACTGTCAAGCCATTTTTCGAACAGACTCTTCTCCTGGTCCATCTCAGATAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377966.4
ENST00000475774.5
ENST00000479053.1
CDS TCA 72 bp CCTTTCTCCCACAACTTCATGTCATTCATGGCTCCTTaGTCTGACTGTGCATTACAACTCCTGAAAAGTTCT +
Preference number: 6 (lower is better)
Translates to: PFSHNFMSFMAP*SDCALQLLKSS
Trigger: AGAACTTTTCAGGAGTTGTAATGCACAGTCAGATCAAGGAGCCATGAATGACATGAAGTTGTGGGAGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 72 bp AGCTACACCAAAGGATGTCAAAAGCCATTAGAGTTCTaGTTTAGATGGTGGCCAAACAAGGCACACAGTACT +
Preference number: 6 (lower is better)
Translates to: SYTKGCQKPLEF*FRWWPNKAHST
Trigger: AGTACTGTGTGCCTTGTTTGGCCACCATCTAAATCAGAACTCTAATGGCTTTTGACATCCTTTGGTGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479053.1
CDS GCA 72 bp CTTTTTCCTCTTTGGTATAAAGTGCAGAGATTGTTGTaGTCCATGTGGTCTGTGTCACAAACAGGATCTTGG +
Preference number: 6 (lower is better)
Translates to: LFPLWYKVQRLL*SMWSVSQTGSW
Trigger: CCAAGATCCTGTTTGTGACACAGACCACATGGAGCACAACAATCTCTGCACTTTATACCAAAGAGGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 72 bp GTAGGTGACAGAAGCTCACAAATACTTTCAGCTGTGTaGTCTTCAGGGAATTTGTTCTGGTCTCCACATTTT +
Preference number: 6 (lower is better)
Translates to: VGDRSSQILSAV*SSGNLFWSPHF
Trigger: AAAATGTGGAGACCAGAACAAATTCCCTGAAGACCACACAGCTGAAAGTATTTGTGAGCTTCTGTCACCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 72 bp TTCCACTGGATTATATTCACAAAAGCGATCAAACTCTaGCCAACTCTGTGTATTGCCCCAGCTCATGCTGTA +
Preference number: 6 (lower is better)
Translates to: FHWIIFTKAIKL*PTLCIAPAHAV
Trigger: TACAGCATGAGCTGGGGCAATACACAGAGTTGGCAAGAGTTTGATCGCTTTTGTGAATATAATCCAGTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 72 bp AGGCTTTTTCCTCTTTGGTATAAAGTGCAGAGATTGTaGTGCTCCATGTGGTCTGTGTCACAAACAGGATCT +
Preference number: 6 (lower is better)
Translates to: RLFPLWYKVQRL*CSMWSVSQTGS
Trigger: AGATCCTGTTTGTGACACAGACCACATGGAGCACAACAATCTCTGCACTTTATACCAAAGAGGAAAAAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CAA 90 bp CATGGACACTTCCACTGGATTATATTCACAAAAGCGATCAAACTCTaGCCAACTCTGTGTATTGCCCCAGCTCATGCTGTAAAGTTTAGT +
Preference number: 6 (lower is better)
Translates to: HGHFHWIIFTKAIKL*PTLCIAPAHAVKFS
Trigger: ACTAAACTTTACAGCATGAGCTGGGGCAATACACAGAGTTGGCAAGAGTTTGATCGCTTTTGTGAATATAATCCAGTGGAAGTGTCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS CCA 72 bp GAGCACAGATCTGCCTTTAAAACAAATGAAGGTTATTaGGGCAATGCTTCATCCTCTGATTTTGACCACACA +
Preference number: 6 (lower is better)
Translates to: EHRSAFKTNEGY*GNASSSDFDHT
Trigger: TGTGTGGTCAAAATCAGAGGATGAAGCATTGCCCCAATAACCTTCATTTGTTTTAAAGGCAGATCTGTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479053.1
CDS CCA 72 bp TTCTCTGACTTTGGAAGAAATCTGTGCATATCTGTTTaGCGCCTTCTTTTCCAGATTCCTCTGTATTGGCAA +
Preference number: 6 (lower is better)
Translates to: FSDFGRNLCISV*RLLFQIPLYWQ
Trigger: TTGCCAATACAGAGGAATCTGGAAAAGAAGGCGCCAAACAGATATGCACAGATTTCTTCCAAAGTCAGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475774.5
ENST00000479053.1
CDS GCA 72 bp CCTCCAACAATACAAGACTTCTGGAGGTCTATACAGTaGATTTCCATACAGTTTTCTAAGAGTCCACTTTGT +
Preference number: 6 (lower is better)
Translates to: PPTIQDFWRSIQ*ISIQFSKSPLC
Trigger: ACAAAGTGGACTCTTAGAAAACTGTATGGAAATGCACTGTATAGACCTCCAGAAGTCTTGTATTGTTGGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4
CDS TCA 72 bp AATCAGTCAGTTTTTATAAATCTGGTCACCTCTAGGTaGAGAAAATGGATTCCAGGATGTACAAAGCGGAGA +
Preference number: 6 (lower is better)
Translates to: NQSVFINLVTSR*RKWIPGCTKRR
Trigger: TCTCCGCTTTGTACATCCTGGAATCCATTTTCTTCACCTAGAGGTGACCAGATTTATAAAAACTGACTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479053.1
CDS TCA 72 bp TCTGATTTGCAAATAATACTTCCCCGAGATTTACTATaGCAAGGTTTAATCTGCAGTGAACAAGCTATTGCT +
Preference number: 6 (lower is better)
Translates to: SDLQIILPRDLL*QGLICSEQAIA
Trigger: AGCAATAGCTTGTTCACTGCAGATTAAACCTTGTCATAGTAAATCTCGGGGAAGTATTATTTGCAAATCAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377966.4