RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RDX (Homo sapiens)

Ensembl gene IDs: ENSG00000137710

Ensembl transcript IDs: ENST00000528498.5, ENST00000528900.5, ENST00000530301.5, ENST00000530749.5, ENST00000642511.1, ENST00000645312.1, ENST00000645527.1, ENST00000646663.1, ENST00000647231.1

Found 389 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGATGGGCTTGGGTTGGGACTCAGGCCAGCTGACCAGGGTTCACTaGTTAAGGCCCCAGAAAAACCCAGGGCCCGCTGCGTCTGATAAG +
Preference number: 1 (lower is better)
Translates to: VMGLGWDSGQLTRVH*LRPQKNPGPAASDK
Trigger: CTTATCAGACGCAGCGGGCCCTGGGTTTTTCTGGGGCCTTAAGCAGTGAACCCTGGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
3UTR CCA 90 bp GCATGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTaGCTTGGGACTGCAGGGTGCTGTGCGAAGTCCCAAGTCCTGGCC +
Preference number: 1 (lower is better)
Translates to: ACLGDRVLKMGCSRC*LGTAGCCAKSQVLA
Trigger: GGCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR GCA 90 bp GTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTGGGACTGCAGGGTaGTGTGCGAAGTCCCAAGTCCTGGCCCATCTTGCTAAGGTCTGT +
Preference number: 1 (lower is better)
Translates to: VLKMGCSRCWLGTAG*CAKSQVLAHLAKVC
Trigger: ACAGACCTTAGCAAGATGGGCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCATCTACTGCACCCCATCTTCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR GCA 90 bp CCAGCATGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATaGTGGCTTGGGACTGCAGGGTGCTGTGCGAAGTCCCAAGTCCTG +
Preference number: 1 (lower is better)
Translates to: PACLGDRVLKMGCSR*WLGTAGCCAKSQVL
Trigger: CAGGACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACATGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR TCA 90 bp ATCCAGAGGAGACTGCGGGAAAAGACCCGTCATCACTGGGAGTCTTaGGCTTCTTTGAATGTTGGAAGCAGCCCCAGTGGCAGTATCAGG +
Preference number: 1 (lower is better)
Translates to: IQRRLREKTRHHWES*ASLNVGSSPSGSIR
Trigger: CCTGATACTGCCACTGGGGCTGCTTCCAACATTCAAAGAAGCTCAAGACTCCCAGTGATGACGGGTCTTTTCCCGCAGTCTCCTCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR TCA 90 bp GACTGCGGGAAAAGACCCGTCATCACTGGGAGTCTTGAGCTTCTTTaGATGTTGGAAGCAGCCCCAGTGGCAGTATCAGGGCTACAAGAA +
Preference number: 1 (lower is better)
Translates to: DCGKRPVITGSLELL*MLEAAPVAVSGLQE
Trigger: TTCTTGTAGCCCTGATACTGCCACTGGGGCTGCTTCCAACATTCAAAGAAGCTCAAGACTCCCAGTGATGACGGGTCTTTTCCCGCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR GCA 90 bp ATGTTGGAAGCAGCCCCAGTGGCAGTATCAGGGCTACAAGAACTTTaGCAATGGCCGAGGGCTCTGATAAACCCACCCTTGTCAAAGTCT +
Preference number: 1 (lower is better)
Translates to: MLEAAPVAVSGLQEL*QWPRALINPPLSKS
Trigger: AGACTTTGACAAGGGTGGGTTTATCAGAGCCCTCGGCCATTGGCAAAGTTCTTGTAGCCCTGATACTGCCACTGGGGCTGCTTCCAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR TCA 90 bp AAGATCACCCTCTCTTTTATTGGAGGGACAGGACTGATCTGCCAGTaGGAACAACTGCACGGCTCCAGAGCATCTCAGAGGGTCAGTCTT +
Preference number: 1 (lower is better)
Translates to: KITLSFIGGTGLICQ*EQLHGSRASQRVSL
Trigger: AAGACTGACCCTCTGAGATGCTCTGGAGCCGTGCAGTTGTTCTCACTGGCAGATCAGTCCTGTCCCTCCAATAAAAGAGAGGGTGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR TCA 90 bp CATCTCACACCAAGATCACCCTCTCTTTTATTGGAGGGACAGGACTaGTCTGCCAGTGAGAACAACTGCACGGCTCCAGAGCATCTCAGA +
Preference number: 1 (lower is better)
Translates to: HLTPRSPSLLLEGQD*SASENNCTAPEHLR
Trigger: TCTGAGATGCTCTGGAGCCGTGCAGTTGTTCTCACTGGCAGATCAGTCCTGTCCCTCCAATAAAAGAGAGGGTGATCTTGGTGTGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR GCA 90 bp GAGCGCATCTGGAACAATGCATACAGTTTGGGTCCCCACCTCCTCTaGAGACACGTTGGCATTGCCGGAATTAAAGAGGTCAATTTCAGC +
Preference number: 1 (lower is better)
Translates to: ERIWNNAYSLGPHLL*RHVGIAGIKEVNFS
Trigger: GCTGAAATTGACCTCTTTAATTCCGGCAATGCCAACGTGTCTGCAGAGGAGGTGGGGACCCAAACTGTATGCATTGTTCCAGATGCGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646663.1
3UTR GCA 90 bp CAGGGGCCTAGTGAGGGAGGGAGCCTTCTTCCTAAGGGTTACATTTaGTTTATGCTGCTTTGGCAAGAGCGCATCTGGAACAATGCATAC +
Preference number: 1 (lower is better)
Translates to: QGPSEGGSLLPKGYI*FMLLWQERIWNNAY
Trigger: GTATGCATTGTTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAAATGTAACCCTTAGGAAGAAGGCTCCCTCCCTCACTAGGCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646663.1
3UTR CCA 90 bp AGAAGAGGAGAGAACCATGAGCCAGGGCCCTGGGTAATGGAATACTaGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGGATATA +
Preference number: 1 (lower is better)
Translates to: RRGENHEPGPWVMEY*SIQFQLRLQTLGDI
Trigger: TATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCAGGGCCCTGGCTCATGGTTCTCTCCTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR CCA 90 bp TTATGCTGCTTTGGCAAGAGCGCATCTGGAACAATGCATACAGTTTaGGTCCCCACCTCCTCTGCAGACACGTTGGCATTGCCGGAATTA +
Preference number: 1 (lower is better)
Translates to: LCCFGKSASGTMHTV*VPTSSADTLALPEL
Trigger: TAATTCCGGCAATGCCAACGTGTCTGCAGAGGAGGTGGGGACCCAAACTGTATGCATTGTTCCAGATGCGCTCTTGCCAAAGCAGCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646663.1
3UTR TCA 90 bp TCACTTGGGAACTTGTCTGAAATGCAAATTCTTGGGCCCCACTGCTaGCATGCTGAATCAGAAACTCTGGTAGCGGAGCCCAGCATGTGT +
Preference number: 1 (lower is better)
Translates to: SLGNLSEMQILGPHC*HAESETLVAEPSMC
Trigger: ACACATGCTGGGCTCCGCTACCAGAGTTTCTGATTCAGCATGTCAGCAGTGGGGCCCAAGAATTTGCATTTCAGACAAGTTCCCAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
3UTR CCA 90 bp GCAACAGTGGTAGCTTCTGTGTCCAAAGGAGGTTATTTCAGAGTCTaGACTCTTGTCTCCACTCTAGCATTCTTTGTAGCCCAGGGCAGG +
Preference number: 1 (lower is better)
Translates to: ATVVASVSKGGYFRV*TLVSTLAFFVAQGR
Trigger: CCTGCCCTGGGCTACAAAGAATGCTAGAGTGGAGACAAGAGTCCAGACTCTGAAATAACCTCCTTTGGACACAGAAGCTACCACTGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530749.5
3UTR CCA 90 bp AACAGAATGCCTTCTCTTAGCCAAGTGTTCCTTGGGTCTTCAGTGTaGTCTCCAGTCCAGCAGCCTCAGTTTCACTTGGGAACTTGTCTG +
Preference number: 1 (lower is better)
Translates to: NRMPSLSQVFLGSSV*SPVQQPQFHLGTCL
Trigger: CAGACAAGTTCCCAAGTGAAACTGAGGCTGCTGGACTGGAGACCACACTGAAGACCCAAGGAACACTTGGCTAAGAGAAGGCATTCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645312.1
3UTR CCA 90 bp GGAGGGAGCCTTCTTCCTAAGGGTTACATTTGCTTTATGCTGCTTTaGCAAGAGCGCATCTGGAACAATGCATACAGTTTGGGTCCCCAC +
Preference number: 1 (lower is better)
Translates to: GGSLLPKGYICFMLL*QERIWNNAYSLGPH
Trigger: GTGGGGACCCAAACTGTATGCATTGTTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAAATGTAACCCTTAGGAAGAAGGCTCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646663.1
3UTR GCA 90 bp TCTCCAGTCCAGCAGCCTCAGTTTCACTTGGGAACTTGTCTGAAATaGAAATTCTTGGGCCCCACTGCTGACATGCTGAATCAGAAACTC +
Preference number: 1 (lower is better)
Translates to: SPVQQPQFHLGTCLK*KFLGPTADMLNQKL
Trigger: GAGTTTCTGATTCAGCATGTCAGCAGTGGGGCCCAAGAATTTGCATTTCAGACAAGTTCCCAAGTGAAACTGAGGCTGCTGGACTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
3UTR GCA 90 bp TTACATTTGCTTTATGCTGCTTTGGCAAGAGCGCATCTGGAACAATaGATACAGTTTGGGTCCCCACCTCCTCTGCAGACACGTTGGCAT +
Preference number: 1 (lower is better)
Translates to: LHLLYAALARAHLEQ*IQFGSPPPLQTRWH
Trigger: ATGCCAACGTGTCTGCAGAGGAGGTGGGGACCCAAACTGTATGCATTGTTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAAATGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646663.1
3UTR GCA 90 bp GTGAGGGAGGGAGCCTTCTTCCTAAGGGTTACATTTGCTTTATGCTaGTTTGGCAAGAGCGCATCTGGAACAATGCATACAGTTTGGGTC +
Preference number: 1 (lower is better)
Translates to: VREGAFFLRVTFALC*FGKSASGTMHTVWV
Trigger: GACCCAAACTGTATGCATTGTTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAAATGTAACCCTTAGGAAGAAGGCTCCCTCCCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646663.1
3UTR GCA 90 bp CTAGTGAGGGAGGGAGCCTTCTTCCTAAGGGTTACATTTGCTTTATaGTGCTTTGGCAAGAGCGCATCTGGAACAATGCATACAGTTTGG +
Preference number: 1 (lower is better)
Translates to: LVREGAFFLRVTFAL*CFGKSASGTMHTVW
Trigger: CCAAACTGTATGCATTGTTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAAATGTAACCCTTAGGAAGAAGGCTCCCTCCCTCACTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646663.1
3UTR CCA 90 bp GCAACAGTGGTAGCTTCTGTGTCCAAAGGAGGTTATTTCAGAGTCTaGACTCTTGTCTCCACTCTAGCATTCTTTGTAGCCCTAGTGAGG +
Preference number: 1 (lower is better)
Translates to: ATVVASVSKGGYFRV*TLVSTLAFFVALVR
Trigger: CCTCACTAGGGCTACAAAGAATGCTAGAGTGGAGACAAGAGTCCAGACTCTGAAATAACCTCCTTTGGACACAGAAGCTACCACTGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528498.5
3UTR TCA 90 bp CAGCTGACTCAGACAGCCTTGAGAACATTGGGTTCTTCTGGAGTTTaGGGGAACAATAACAGAATGCCTTCTCTTAGCCAAGTGTTCCTT +
Preference number: 1 (lower is better)
Translates to: QLTQTALRTLGSSGV*GNNNRMPSLSQVFL
Trigger: AAGGAACACTTGGCTAAGAGAAGGCATTCTGTTATTGTTCCCTCAAACTCCAGAAGAACCCAATGTTCTCAAGGCTGTCTGAGTCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
3UTR GCA 90 bp GTGGACCCACACACCTTCATCACTCTGCTTTCATGTACAAACACCTaGGACAATGATGTCACTTGGATTAGAGGAAAGGTTTCACTGAGA +
Preference number: 1 (lower is better)
Translates to: VDPHTFITLLSCTNT*DNDVTWIRGKVSLR
Trigger: TCTCAGTGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACATGAAAGCAGAGTGATGAAGGTGTGTGGGTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
3UTR TCA 90 bp AGAGCCTGGGGGCTTTTTCTGAGTCATATGGAAACTGCTGCAGGGTaGCAATCAGAACCTTACAGAATTATCAAGTGTGAAATGAAGGCA +
Preference number: 1 (lower is better)
Translates to: RAWGLFLSHMETAAG*QSEPYRIIKCEMKA
Trigger: TGCCTTCATTTCACACTTGATAATTCTGTAAGGTTCTGATTGTCACCCTGCAGCAGTTTCCATATGACTCAGAAAAAGCCCCCAGGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR TCA 90 bp ATAATCATTTGTTTCTCCCCAAGGCCGTGGGCTAGAAGAGGATATTaGTTTGTAAGAATTACTCATGCTGACCGAGGACTGTTTGCCAGC +
Preference number: 1 (lower is better)
Translates to: IIICFSPRPWARRGY*FVRITHADRGLFAS
Trigger: GCTGGCAAACAGTCCTCGGTCAGCATGAGTAATTCTTACAAATCAATATCCTCTTCTAGCCCACGGCCTTGGGGAGAAACAAATGATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
3UTR GCA 90 bp ATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTaGAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCAC +
Preference number: 1 (lower is better)
Translates to: IIQTAQTGKKCCIDF*RFHQHVHRNGAVHH
Trigger: GTGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR GCA 90 bp GCTGTATTTTTACTTCTTCCGTGGACCCACACACCTTCATCACTCTaGTTTCATGTACAAACACCTGCGACAATGATGTCACTTGGATTA +
Preference number: 1 (lower is better)
Translates to: AVFLLLPWTHTPSSL*FHVQTPATMMSLGL
Trigger: TAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACATGAAAGCAGAGTGATGAAGGTGTGTGGGTCCACGGAAGAAGTAAAAATACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
3UTR CCA 90 bp ATCACTCTGCTTTCATGTACAAACACCTGCGACAATGATGTCACTTaGATTAGAGGAAAGGTTTCACTGAGATCTTCCTGTCTTGAGGCT +
Preference number: 1 (lower is better)
Translates to: ITLLSCTNTCDNDVT*IRGKVSLRSSCLEA
Trigger: AGCCTCAAGACAGGAAGATCTCAGTGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACATGAAAGCAGAGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
3UTR TCA 90 bp AAACTCTCAAGAGAAAGAAAGAATTCCACCTTGCTAAGCAATCCCTaGGCTCAAAGCTTTGATCACACTTCAAAAGAGAACATCTCACAC +
Preference number: 1 (lower is better)
Translates to: KLSRERKNSTLLSNP*AQSFDHTSKENISH
Trigger: GTGTGAGATGTTCTCTTTTGAAGTGTGATCAAAGCTTTGAGCTCAGGGATTGCTTAGCAAGGTGGAATTCTTTCTTTCTCTTGAGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR TCA 90 bp CTGCAGGGTGACAATCAGAACCTTACAGAATTATCAAGTGTGAAATaGAGGCAACACCAAAGGAAAGAAATTCTCACTATTTTCCAAGGT +
Preference number: 1 (lower is better)
Translates to: LQGDNQNLTELSSVK*RQHQRKEILTIFQG
Trigger: ACCTTGGAAAATAGTGAGAATTTCTTTCCTTTGGTGTTGCCTTCATTTCACACTTGATAATTCTGTAAGGTTCTGATTGTCACCCTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR TCA 90 bp AACTGCTGCAGGGTGACAATCAGAACCTTACAGAATTATCAAGTGTaGAATGAAGGCAACACCAAAGGAAAGAAATTCTCACTATTTTCC +
Preference number: 1 (lower is better)
Translates to: NCCRVTIRTLQNYQV*NEGNTKGKKFSLFS
Trigger: GGAAAATAGTGAGAATTTCTTTCCTTTGGTGTTGCCTTCATTTCACACTTGATAATTCTGTAAGGTTCTGATTGTCACCCTGCAGCAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR GCA 90 bp CATTTATATACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTaGATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGA +
Preference number: 1 (lower is better)
Translates to: HLYTIIQTAQTGKKC*IDFCRFHQHVHRNG
Trigger: TCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTATATAAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
3UTR-3UTR GCA 90 bp TTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTGGGACTGCAGACTGCAGGGTGCTGTaGGAAGTCCCAAGTCCTGGC +
Preference number: 2 (lower is better)
Translates to: LGDRVLKMGCSRCWLGTADCRVL*EVPSPG
Trigger: GCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTC...TGCAGTCCCAAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR CAA 90 bp TCACTGAGATCTTCCTGTCTTGAGGCTTGTGGTGATGGGCTTGGGTaGGGACTCAGGCCAGCTGACCAGGGTTCACTGCTTAAGGCCCCA +
Preference number: 2 (lower is better)
Translates to: SLRSSCLEACGDGLG*GLRPADQGSLLKAP
Trigger: TGGGGCCTTAAGCAGTGAACCCTGGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAGACAGGAAGATCTCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
3UTR-3UTR GCA 90 bp TTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTGGGACTGCACTTGGGACTGCAGGGTaGTGTGCGAAGTCCCAAGTC +
Preference number: 2 (lower is better)
Translates to: LGDRVLKMGCSRCWLGTALGTAG*CAKSQV
Trigger: GACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAG...TGCAGTCCCAAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR GCA 90 bp CCTGTCTTGAGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTGACCCTGACCAGGGTTCACTaGTTAAGGCCCCAGAAAAAC +
Preference number: 2 (lower is better)
Translates to: PVLRLVVMGLGWDSGQLTLTRVH*LRPQKN
Trigger: GTTTTTCTGGGGCCTTAAGCAGTGAACCCTGGTCAG...GGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
3UTR-3UTR TCA 90 bp TTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTGGGACTGCAAAGAGGAGAGAACCATaGGCCAGGGCCCTGGGTAAT +
Preference number: 2 (lower is better)
Translates to: LGDRVLKMGCSRCWLGTAKRREP*ARALGN
Trigger: ATTACCCAGGGCCCTGGCTCATGGTTCTCTCCTCTT...TGCAGTCCCAAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR GCA 90 bp AGGGACAGGACTGATCTGCCAGTGAGAACAACTGCACGGCTCCAGAGCATCTCAGGGCTACAAGAACTTTaGCAATGGCCGAGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: RDRTDLPVRTTARLQSISGLQEL*QWPRAL
Trigger: CAGAGCCCTCGGCCATTGGCAAAGTTCTTGTAGCCC...TGAGATGCTCTGGAGCCGTGCAGTTGTTCTCACTGGCAGATCAGTCCTGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR-3UTR TCA 90 bp GATGCTGGCTTGGGACTGCAGGGTGCTGTGCGAAGTCCCAAGTCCTGGCCCATCAATCCAACAGTAAACTaGGAAGAGGAGAGAACCATG +
Preference number: 2 (lower is better)
Translates to: DAGLGLQGAVRSPKSWPINPTVN*EEERTM
Trigger: CATGGTTCTCTCCTCTTCTCAGTTTACTGTTGGATT...GATGGGCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR GCA 90 bp AGGGACAGGACTGATCTGCCAGTGAGAACAACTGCACGGCTCCAGAGCATCTCACTGACCAGGGTTCACTaGTTAAGGCCCCAGAAAAAC +
Preference number: 2 (lower is better)
Translates to: RDRTDLPVRTTARLQSISLTRVH*LRPQKN
Trigger: GTTTTTCTGGGGCCTTAAGCAGTGAACCCTGGTCAG...TGAGATGCTCTGGAGCCGTGCAGTTGTTCTCACTGGCAGATCAGTCCTGTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR-3UTR CCA 90 bp CCGCTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCCAAAGGAGGTTATTTACTGTCCTGCAGCAGTaGCCTAGTGAGGGAGGGAGC +
Preference number: 2 (lower is better)
Translates to: PLRLISNSGSFCVQRRLFTVLQQ*PSEGGS
Trigger: GCTCCCTCCCTCACTAGGCCACTGCTGCAGGACAGT...AAATAACCTCCTTTGGACACAGAAGCTACCACTGTTGCTTATCAGACGCAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530749.5
3UTR CAA 90 bp AATGTTGGAAGCAGCCCCAGTGGCAGTATCAGGGCTACAAGAACTTaGCCAATGGCCGAGGGCTCTGATAAACCCACCCTTGTCAAAGTC +
Preference number: 2 (lower is better)
Translates to: NVGSSPSGSIRATRT*PMAEGSDKPTLVKV
Trigger: GACTTTGACAAGGGTGGGTTTATCAGAGCCCTCGGCCATTGGCAAAGTTCTTGTAGCCCTGATACTGCCACTGGGGCTGCTTCCAACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR CAA 90 bp AATCCAGAGGAGACTGCGGGAAAAGACCCGTCATCACTGGGAGTCTaGAGCTTCTTTGAATGTTGGAAGCAGCCCCAGTGGCAGTATCAG +
Preference number: 2 (lower is better)
Translates to: NPEETAGKDPSSLGV*SFFECWKQPQWQYQ
Trigger: CTGATACTGCCACTGGGGCTGCTTCCAACATTCAAAGAAGCTCAAGACTCCCAGTGATGACGGGTCTTTTCCCGCAGTCTCCTCTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR-3UTR GCA 90 bp GAACAACTGCACGGCTCCAGAGCATCTCAGAGGGTCAGTCTTCCAGGCAGCTGGTCATGTACAAACACCTaGGACAATGATGTCACTTGG +
Preference number: 2 (lower is better)
Translates to: EQLHGSRASQRVSLPGSWSCTNT*DNDVTW
Trigger: CCAAGTGACATCATTGTCGCAGGTGTTTGTACATGA...CCAGCTGCCTGGAAGACTGACCCTCTGAGATGCTCTGGAGCCGTGCAGTTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR CAA 90 bp ATGCATACAGTTTGGGTCCCCACCTCCTCTGCAGACACGTTGGCATaGCCGGAATTAAAGAGGTCAATTTCAGCCCTACTCTCTCTGGTC +
Preference number: 2 (lower is better)
Translates to: MHTVWVPTSSADTLA*PELKRSISALLSLV
Trigger: GACCAGAGAGAGTAGGGCTGAAATTGACCTCTTTAATTCCGGCAATGCCAACGTGTCTGCAGAGGAGGTGGGGACCCAAACTGTATGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646663.1
3UTR CAA 90 bp TTTATGCTGCTTTGGCAAGAGCGCATCTGGAACAATGCATACAGTTaGGGTCCCCACCTCCTCTGCAGACACGTTGGCATTGCCGGAATT +
Preference number: 2 (lower is better)
Translates to: FMLLWQERIWNNAYS*GPHLLCRHVGIAGI
Trigger: AATTCCGGCAATGCCAACGTGTCTGCAGAGGAGGTGGGGACCCAAACTGTATGCATTGTTCCAGATGCGCTCTTGCCAAAGCAGCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646663.1
3UTR-3UTR TCA 90 bp TGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTGGGACTTGGGTTCTCATAAGCTaGTGCCTTCCAGCATGTTTG +
Preference number: 2 (lower is better)
Translates to: CLGDRVLKMGCSRCWLGTWVLIS*CLPACL
Trigger: CAAACATGCTGGAAGGCATCAGCTTATGAGAACCCA...AGTCCCAAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR GCA 90 bp CATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCAATGCTGGCTTGGGACTaGAGGGTGCTGTGCGAAGTC +
Preference number: 2 (lower is better)
Translates to: HRFLQIPPTCAQKWSCSPMLAWD*RVLCEV
Trigger: GACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCAT...TGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR CAA 90 bp GGGCCCTGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATaGCAGACTTTGGGGGATATACACATTCAGAACACCAGGTATGTC +
Preference number: 2 (lower is better)
Translates to: GPWVMEYWSIQFQLR*QTLGDIHIQNTRYV
Trigger: GACATACCTGGTGTTCTGAATGTGTATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCAGGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR TCA 90 bp TGCATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCCATCCAGTTCCAGCTaGGATTGCAGACTTTGGGGG +
Preference number: 2 (lower is better)
Translates to: CIDFCRFHQHVHRNGAVHPSSSS*DCRLWG
Trigger: CCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGG...GTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR TCA 90 bp GCATGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTGGGAATCCAACAGTAAACTaGGAAGAGGAGAGAACCATG +
Preference number: 2 (lower is better)
Translates to: ACLGDRVLKMGCSRCWLGNPTVN*EEERTM
Trigger: CATGGTTCTCTCCTCTTCTCAGTTTACTGTTGGATT...CCCAAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR TCA 90 bp CCAGCATGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTTTTAGGAAAGGCAATTaGGAGGGGTCTGGAGAGAAA +
Preference number: 2 (lower is better)
Translates to: PACLGDRVLKMGCSRCWLFRKGN*EGSGEK
Trigger: TTTCTCTCCAGACCCCTCTCAATTGCCTTTCCTAAA...AAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACATGCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR TCA 90 bp CTTCCGTGGACCCACACACCTTCATCACTCTGCTTTCATGTACAAACACCTGCGGAGGAAAGGTTTCACTaGGATCTTCCTGTCTTGAGG +
Preference number: 2 (lower is better)
Translates to: LPWTHTPSSLCFHVQTPAEERFH*DLPVLR
Trigger: CCTCAAGACAGGAAGATCTCAGTGAAACCTTTCCTC...CGCAGGTGTTTGTACATGAAAGCAGAGTGATGAAGGTGTGTGGGTCCACGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
3UTR-3UTR GCA 90 bp CAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGATTCCACCAACATGGTCCTGAAGATGGGGTaGAGTAGATGCTGGCTTGGG +
Preference number: 2 (lower is better)
Translates to: QPRQERNVASISADSTNMVLKMG*SRCWLG
Trigger: CCCAAGCCAGCATCTACTGCACCCCATCTTCAGGAC...CATGTTGGTGGAATCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR GCA 90 bp TTCCGTGGACCCACACACCTTCATCACTCTGCTTTCATGTACAAACACCTGCGACTGACCAGGGTTCACTaGTTAAGGCCCCAGAAAAAC +
Preference number: 2 (lower is better)
Translates to: FRGPTHLHHSAFMYKHLRLTRVH*LRPQKN
Trigger: GTTTTTCTGGGGCCTTAAGCAGTGAACCCTGGTCAG...TCGCAGGTGTTTGTACATGAAAGCAGAGTGATGAAGGTGTGTGGGTCCACGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
3UTR-3UTR CCA 90 bp CATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCACATGAGCCAGGGCCCTaGGTAATGGAATACTGGTCC +
Preference number: 2 (lower is better)
Translates to: HRFLQIPPTCAQKWSCSPHEPGP*VMEYWS
Trigger: GGACCAGTATTCCATTACCCAGGGCCCTGGCTCATG...TGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR GCA 90 bp ACAGAATGCCTTCTCTTAGCCAAGTGTTCCTTGGGTCTTCAGTGTGGTCTCCAGTGTTTTCACAACTCCTaGAGGCAGTTCTGCTGCACA +
Preference number: 2 (lower is better)
Translates to: TECLLLAKCSLGLQCGLQCFHNS*RQFCCT
Trigger: TGTGCAGCAGAACTGCCTGCAGGAGTTGTGAAAACA...CTGGAGACCACACTGAAGACCCAAGGAACACTTGGCTAAGAGAAGGCATTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
3UTR-3UTR CCA 90 bp TGCATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCGAAGTCCCAAGTCCTaGCCCATCTTGCTAAGGTCT +
Preference number: 2 (lower is better)
Translates to: CIDFCRFHQHVHRNGAVHRSPKS*PILLRS
Trigger: AGACCTTAGCAAGATGGGCCAGGACTTGGGACTTCG...GTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR GCA 90 bp TGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTTCACTGAGATCTTCCTGTTCAGCTTCACTGTCCTaGAGCAGTGGCCTAGTGAGG +
Preference number: 2 (lower is better)
Translates to: CDNDVTWIRGKVSLRSSCSASLS*SSGLVR
Trigger: CCTCACTAGGCCACTGCTGCAGGACAGTGAAGCTGA...ACAGGAAGATCTCAGTGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530749.5
3UTR-3UTR TCA 90 bp CAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGATTCCACCAACATGTGGGTTCTCATAAGCTaGTGCCTTCCAGCATGTTTG +
Preference number: 2 (lower is better)
Translates to: QPRQERNVASISADSTNMWVLIS*CLPACL
Trigger: CAAACATGCTGGAAGGCATCAGCTTATGAGAACCCA...CATGTTGGTGGAATCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR CCA 90 bp ATACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGGGTGCAGTAGATGCTaGCTTGGGACTGCAGGGTGC +
Preference number: 2 (lower is better)
Translates to: IQLYKQPRQERNVASISAGCSRC*LGTAGC
Trigger: GCACCCTGCAGTCCCAAGCCAGCATCTACTGCACCC...TGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR TCA 90 bp TCTCAGAGGGTCAGTCTTCCAGGCAGCTGGTTTCTTCTCCCTCTTTTCCTTCATTTCATGTACAGCTTCTaGTTTCTTCACTCTCACCTT +
Preference number: 2 (lower is better)
Translates to: SQRVSLPGSWFLLPLFLHFMYSF*FLHSHL
Trigger: AAGGTGAGAGTGAAGAAATCAGAAGCTGTACATGAA...ATGAAGGAAAAGAGGGAGAAGAAACCAGCTGCCTGGAAGACTGACCCTCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR-3UTR TCA 90 bp GGGAACAATAACAGAATGCCTTCTCTTAGCCAAGTGTTCCTTGGGTCTTCAGTGACTTGGGAACTTGTCTaGAATGCAAATTCTTGGGCC +
Preference number: 2 (lower is better)
Translates to: GNNNRMPSLSQVFLGSSVTWELV*NANSWA
Trigger: GGCCCAAGAATTTGCATTTCAGACAAGTTCCCAAGT...CACTGAAGACCCAAGGAACACTTGGCTAAGAGAAGGCATTCTGTTATTGTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645312.1
3UTR-3UTR GCA 90 bp ATACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAATGCTGGCTTGGGACTaGAGGGTGCTGTGCGAAGTC +
Preference number: 2 (lower is better)
Translates to: IQLYKQPRQERNVASISAMLAWD*RVLCEV
Trigger: GACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCAT...TGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR CCA 90 bp CAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGATTCCACCAACATGACATGTGCACAGAAATaGAGCTGTTCACCACTGAGT +
Preference number: 2 (lower is better)
Translates to: QPRQERNVASISADSTNMTCAQK*SCSPLS
Trigger: ACTCAGTGGTGAACAGCTCCATTTCTGTGCACATGT...CATGTTGGTGGAATCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR CAA 90 bp GTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTaGGGGGATATACACATTCAGAACACCAGGTATGTCCTTATCCTA +
Preference number: 2 (lower is better)
Translates to: VMEYWSIQFQLRLQT*GDIHIQNTRYVLIL
Trigger: TAGGATAAGGACATACCTGGTGTTCTGAATGTGTATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR TCA 90 bp ATACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCACCATCCAGTTCCAGCTaGGATTGCAGACTTTGGGGG +
Preference number: 2 (lower is better)
Translates to: IQLYKQPRQERNVASISAPSSSS*DCRLWG
Trigger: CCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGG...TGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR TCA 90 bp ATACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAAAGAGGAGAGAACCATaGGCCAGGGCCCTGGGTAAT +
Preference number: 2 (lower is better)
Translates to: IQLYKQPRQERNVASISAKRREP*ARALGN
Trigger: ATTACCCAGGGCCCTGGCTCATGGTTCTCTCCTCTT...TGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR TCA 90 bp TATACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAAGAGGAGAGAACCATaGGCCAGGGCCCTGGGTAAT +
Preference number: 2 (lower is better)
Translates to: YTIIQTAQTGKKCCIDFCKRREP*ARALGN
Trigger: ATTACCCAGGGCCCTGGCTCATGGTTCTCTCCTCTT...GCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR TCA 90 bp CAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGATTCCACCAACATGAATCCAACAGTAAACTaGGAAGAGGAGAGAACCATG +
Preference number: 2 (lower is better)
Translates to: QPRQERNVASISADSTNMNPTVN*EEERTM
Trigger: CATGGTTCTCTCCTCTTCTCAGTTTACTGTTGGATT...CATGTTGGTGGAATCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR TCA 90 bp AGAAATGTTGCATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGTGGGTTCTCATAAGCTaGTGCCTTCCAGCATGTTTG +
Preference number: 2 (lower is better)
Translates to: RNVASISADSTNMCTEMEWVLIS*CLPACL
Trigger: CAAACATGCTGGAAGGCATCAGCTTATGAGAACCCA...CTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATGCAACATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR TCA 90 bp TGTACAAACACCTGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTTCACTGGAGGAAAGGTTTCACTaGGATCTTCCTGTCTTGAGG +
Preference number: 2 (lower is better)
Translates to: CTNTCDNDVTWIRGKVSLEERFH*DLPVLR
Trigger: CCTCAAGACAGGAAGATCTCAGTGAAACCTTTCCTC...CAGTGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
3UTR-3UTR CCA 90 bp ACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGACGAAGTCCCAAGTCCTaGCCCATCTTGCTAAGGTCT +
Preference number: 2 (lower is better)
Translates to: TIIQTAQTGKKCCIDFCRRSPKS*PILLRS
Trigger: AGACCTTAGCAAGATGGGCCAGGACTTGGGACTTCG...TCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR TCA 90 bp AGAAATGTTGCATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGTTTAGGAAAGGCAATTaGGAGGGGTCTGGAGAGAAA +
Preference number: 2 (lower is better)
Translates to: RNVASISADSTNMCTEMEFRKGN*EGSGEK
Trigger: TTTCTCTCCAGACCCCTCTCAATTGCCTTTCCTAAA...CTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATGCAACATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR CCA 90 bp ATACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCACGAAGTCCCAAGTCCTaGCCCATCTTGCTAAGGTCT +
Preference number: 2 (lower is better)
Translates to: IQLYKQPRQERNVASISARSPKS*PILLRS
Trigger: AGACCTTAGCAAGATGGGCCAGGACTTGGGACTTCG...TGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR GCA 90 bp TATCTTCTCCACTTCAAAACTTCATTTTGTGACTACGATGCCTATCAATTACAGGAATCCAGAGGAGACTaGGGGAAAAGACCCGTCATC +
Preference number: 2 (lower is better)
Translates to: YLLHFKTSFCDYDAYQLQESRGD*GKRPVI
Trigger: GATGACGGGTCTTTTCCCGCAGTCTCCTCTGGATTC...CTGTAATTGATAGGCATCGTAGTCACAAAATGAAGTTTTGAAGTGGAGAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR-3UTR GCA 90 bp CATTTTGTGACTACGATGCCTATCAATTACAGAGGTCATTTAAACTCTCAAGAGTGGAACTTCCGCAGTTaGAGCTCTAGTTGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: HFVTTMPINYRGHLNSQEWNFRS*SSSWEE
Trigger: CTCTTCCCAACTAGAGCTGCAACTGCGGAAGTTCCA...CTCTTGAGAGTTTAAATGACCTCTGTAATTGATAGGCATCGTAGTCACAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR-3UTR CCA 90 bp CTGCTTTCATGTACAAACACCTGCGACAATGATGTCACTTGGATTAGAGGAAAGGGTTATTTCAGAGTCTaGACTCTTGTCTCCACTCTA +
Preference number: 2 (lower is better)
Translates to: LLSCTNTCDNDVTWIRGKGYFRV*TLVSTL
Trigger: TAGAGTGGAGACAAGAGTCCAGACTCTGAAATAACC...CTTTCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACATGAAAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
3UTR-3UTR TCA 90 bp TATACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCGGAGCTGTTCACCACTaGGTTTGCTCTTGGATTGAA +
Preference number: 2 (lower is better)
Translates to: YTIIQTAQTGKKCCIDFCGAVHH*VCSWIE
Trigger: TTCAATCCAAGAGCAAACTCAGTGGTGAACAGCTCC...GCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR TCA 90 bp TTTCTGCATAGAACAGAAATGAGGATAATCCATAATCATTTGTTTCTCCCCAAGCCACTGCTGACATGCTaGATCAGAAACTCTGGTAGC +
Preference number: 2 (lower is better)
Translates to: FLHRTEMRIIHNHLFLPKPLLTC*IRNSGS
Trigger: GCTACCAGAGTTTCTGATTCAGCATGTCAGCAGTGG...CTTGGGGAGAAACAAATGATTATGGATTATCCTCATTTCTGTTCTATGCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
3UTR-3UTR TCA 90 bp ATACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCATTTAGGAAAGGCAATTaGGAGGGGTCTGGAGAGAAA +
Preference number: 2 (lower is better)
Translates to: IQLYKQPRQERNVASISAFRKGN*EGSGEK
Trigger: TTTCTCTCCAGACCCCTCTCAATTGCCTTTCCTAAA...TGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR TCA 90 bp TATCTTCTCCACTTCAAAACTTCATTTTGTGACTACGATGCCTATCAATTACAGACAAATCCATCAAAGTaGTCCTCAAGTGGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: YLLHFKTSFCDYDAYQLQTNPSK*SSSGEA
Trigger: TGCCTCCCCACTTGAGGATCACTTTGATGGATTTGT...CTGTAATTGATAGGCATCGTAGTCACAAAATGAAGTTTTGAAGTGGAGAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR-3UTR CCA 90 bp ATACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAACATGTGCACAGAAATaGAGCTGTTCACCACTGAGT +
Preference number: 2 (lower is better)
Translates to: IQLYKQPRQERNVASISATCAQK*SCSPLS
Trigger: ACTCAGTGGTGAACAGCTCCATTTCTGTGCACATGT...TGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR CAA 90 bp ACATTTATATACAATTATACAAACAGCCCAGACAGGAAAGAAATGTaGCATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGG +
Preference number: 2 (lower is better)
Translates to: TFIYNYTNSPDRKEM*HRFLQIPPTCAQKW
Trigger: CCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTATATAAATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
3UTR GCA 72 bp TTGGGTTGGGACTCAGGCCAGCTGACCAGGGTTCACTaGTTAAGGCCCCAGAAAAACCCAGGGCCCGCTGCG +
Preference number: 3 (lower is better)
Translates to: LGWDSGQLTRVH*LRPQKNPGPAA
Trigger: CGCAGCGGGCCCTGGGTTTTTCTGGGGCCTTAAGCAGTGAACCCTGGTCAGCTGGCCTGAGTCCCAACCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
3UTR-3UTR CAA 90 bp CCTGTCTTGAGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTGACCCTTGTGGTGATGGGCTaGGGTTGGGACTCAGGCCAG +
Preference number: 3 (lower is better)
Translates to: PVLRLVVMGLGWDSGQLTLVVMG*GWDSGQ
Trigger: CTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAG...GGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAGACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
3UTR-3UTR CAA 90 bp CAAAGTGATCCTCAAGTGGGGAGGCAGAAGCTGCAGTGGAACTTCCGCAGTTGCGGTGATGGGCTTGGGTaGGGACTCAGGCCAGCTGAC +
Preference number: 3 (lower is better)
Translates to: QSDPQVGRQKLQWNFRSCGDGLG*GLRPAD
Trigger: GTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACC...GCAACTGCGGAAGTTCCACTGCAGCTTCTGCCTCCCCACTTGAGGATCACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR GCA 72 bp TTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATaGTGGCTTGGGACTGCAGGGTGCTGTGCGAAGTCC +
Preference number: 3 (lower is better)
Translates to: LGDRVLKMGCSR*WLGTAGCCAKS
Trigger: GGACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR TCA 72 bp CACAACTCCTGCAGGCAGTTCTGCTGCACATTCGAGTaGGAACCACGGGCTAGTGAGGGAGGGAGCCTTCTT +
Preference number: 3 (lower is better)
Translates to: HNSCRQFCCTFE*EPRASEGGSLL
Trigger: AAGAAGGCTCCCTCCCTCACTAGCCCGTGGTTCTCACTCGAATGTGCAGCAGAACTGCCTGCAGGAGTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645312.1
3UTR GCA 72 bp GCAGCCCCAGTGGCAGTATCAGGGCTACAAGAACTTTaGCAATGGCCGAGGGCTCTGATAAACCCACCCTTG +
Preference number: 3 (lower is better)
Translates to: AAPVAVSGLQEL*QWPRALINPPL
Trigger: CAAGGGTGGGTTTATCAGAGCCCTCGGCCATTGGCAAAGTTCTTGTAGCCCTGATACTGCCACTGGGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR CCA 72 bp CTTCCTGTCTTGAGGCTTGTGGTGATGGGCTTGGGTTaGGACTCAGGCCAGCTGACCAGGGTTCACTGCTTA +
Preference number: 3 (lower is better)
Translates to: LPVLRLVVMGLG*DSGQLTRVHCL
Trigger: TAAGCAGTGAACCCTGGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAGACAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
3UTR-3UTR CAA 90 bp CTTCCGTGGACCCACACACCTTCATCACTCTGCTTTCATGTACAAACACCTGCGCTTGTGGTGATGGGCTaGGGTTGGGACTCAGGCCAG +
Preference number: 3 (lower is better)
Translates to: LPWTHTPSSLCFHVQTPALVVMG*GWDSGQ
Trigger: CTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAG...CGCAGGTGTTTGTACATGAAAGCAGAGTGATGAAGGTGTGTGGGTCCACGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
3UTR CCA 72 bp TTGGGACTGCAGGGTGCTGTGCGAAGTCCCAAGTCCTaGCCCATCTTGCTAAGGTCTGTCTTTAGGAAAGGC +
Preference number: 3 (lower is better)
Translates to: LGLQGAVRSPKS*PILLRSVFRKG
Trigger: GCCTTTCCTAAAGACAGACCTTAGCAAGATGGGCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR CAA 90 bp GCATGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTGGGTGCCTTCCAGCATGTTaGGGGGATAGAGTCCTGAAG +
Preference number: 3 (lower is better)
Translates to: ACLGDRVLKMGCSRCWLGCLPAC*GDRVLK
Trigger: CTTCAGGACTCTATCCCCCAAACATGCTGGAAGGCA...CCCAAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR TCA 72 bp AGACTGCGGGAAAAGACCCGTCATCACTGGGAGTCTTaGGCTTCTTTGAATGTTGGAAGCAGCCCCAGTGGC +
Preference number: 3 (lower is better)
Translates to: RLREKTRHHWES*ASLNVGSSPSG
Trigger: GCCACTGGGGCTGCTTCCAACATTCAAAGAAGCTCAAGACTCCCAGTGATGACGGGTCTTTTCCCGCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR GCA 72 bp TCCATCAAAGTGATCCTCAAGTGGGGAGGCAGAAGCTaGAGTGGAACTTCCGCAGTTGCAGCTCTAGTTGGG +
Preference number: 3 (lower is better)
Translates to: SIKVILKWGGRS*SGTSAVAALVG
Trigger: CCCAACTAGAGCTGCAACTGCGGAAGTTCCACTGCAGCTTCTGCCTCCCCACTTGAGGATCACTTTGATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR TCA 72 bp CCAAGATCACCCTCTCTTTTATTGGAGGGACAGGACTaGTCTGCCAGTGAGAACAACTGCACGGCTCCAGAG +
Preference number: 3 (lower is better)
Translates to: PRSPSLLLEGQD*SASENNCTAPE
Trigger: CTCTGGAGCCGTGCAGTTGTTCTCACTGGCAGATCAGTCCTGTCCCTCCAATAAAAGAGAGGGTGATCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR CCA 72 bp CCAGTGGCAGTATCAGGGCTACAAGAACTTTGCCAATaGCCGAGGGCTCTGATAAACCCACCCTTGTCAAAG +
Preference number: 3 (lower is better)
Translates to: PVAVSGLQELCQ*PRALINPPLSK
Trigger: CTTTGACAAGGGTGGGTTTATCAGAGCCCTCGGCCATTGGCAAAGTTCTTGTAGCCCTGATACTGCCACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR CCA 72 bp CCTTCTCTTAGCCAAGTGTTCCTTGGGTCTTCAGTGTaGTCTCCAGTCCAGCAGCCTCAGTTTCACTTGGGA +
Preference number: 3 (lower is better)
Translates to: PSLSQVFLGSSV*SPVQQPQFHLG
Trigger: TCCCAAGTGAAACTGAGGCTGCTGGACTGGAGACCACACTGAAGACCCAAGGAACACTTGGCTAAGAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645312.1
3UTR CCA 72 bp TTTGGCAAGAGCGCATCTGGAACAATGCATACAGTTTaGGTCCCCACCTCCTCTGCAGACACGTTGGCATTG +
Preference number: 3 (lower is better)
Translates to: FGKSASGTMHTV*VPTSSADTLAL
Trigger: CAATGCCAACGTGTCTGCAGAGGAGGTGGGGACCCAAACTGTATGCATTGTTCCAGATGCGCTCTTGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646663.1
3UTR TCA 72 bp CAGTCCAGCAGCCTCAGTTTCACTTGGGAACTTGTCTaGAATGCAAATTCTTGGGCCCCACTGCTGACATGC +
Preference number: 3 (lower is better)
Translates to: QSSSLSFTWELV*NANSWAPLLTC
Trigger: GCATGTCAGCAGTGGGGCCCAAGAATTTGCATTTCAGACAAGTTCCCAAGTGAAACTGAGGCTGCTGGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
3UTR GCA 72 bp TGGAACAATGCATACAGTTTGGGTCCCCACCTCCTCTaGAGACACGTTGGCATTGCCGGAATTAAAGAGGTC +
Preference number: 3 (lower is better)
Translates to: WNNAYSLGPHLL*RHVGIAGIKEV
Trigger: GACCTCTTTAATTCCGGCAATGCCAACGTGTCTGCAGAGGAGGTGGGGACCCAAACTGTATGCATTGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646663.1
3UTR TCA 72 bp AACTTGTCTGAAATGCAAATTCTTGGGCCCCACTGCTaGCATGCTGAATCAGAAACTCTGGTAGCGGAGCCC +
Preference number: 3 (lower is better)
Translates to: NLSEMQILGPHC*HAESETLVAEP
Trigger: GGGCTCCGCTACCAGAGTTTCTGATTCAGCATGTCAGCAGTGGGGCCCAAGAATTTGCATTTCAGACAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
3UTR-3UTR CAA 90 bp CATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCATGCCTTCCAGCATGTTaGGGGGATAGAGTCCTGAAG +
Preference number: 3 (lower is better)
Translates to: HRFLQIPPTCAQKWSCSPCLPAC*GDRVLK
Trigger: CTTCAGGACTCTATCCCCCAAACATGCTGGAAGGCA...TGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR CAA 90 bp AGGGACAGGACTGATCTGCCAGTGAGAACAACTGCACGGCTCCAGAGCATCTCAAAGCATTCAGTTGCTTaGTCAGCAATCTCAGTATTC +
Preference number: 3 (lower is better)
Translates to: RDRTDLPVRTTARLQSISKHSVA*SAISVF
Trigger: GAATACTGAGATTGCTGACAAAGCAACTGAATGCTT...TGAGATGCTCTGGAGCCGTGCAGTTGTTCTCACTGGCAGATCAGTCCTGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR GCA 72 bp CAGCAGCCTCAGTTTCACTTGGGAACTTGTCTGAAATaGAAATTCTTGGGCCCCACTGCTGACATGCTGAAT +
Preference number: 3 (lower is better)
Translates to: QQPQFHLGTCLK*KFLGPTADMLN
Trigger: ATTCAGCATGTCAGCAGTGGGGCCCAAGAATTTGCATTTCAGACAAGTTCCCAAGTGAAACTGAGGCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
3UTR CCA 72 bp TACATTTGCTTTATGCTGCTTTGGCAAGAGCGCATCTaGAACAATGCATACAGTTTGGGTCCCCACCTCCTC +
Preference number: 3 (lower is better)
Translates to: YICFMLLWQERI*NNAYSLGPHLL
Trigger: GAGGAGGTGGGGACCCAAACTGTATGCATTGTTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAAATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646663.1
3UTR-3UTR CAA 90 bp CATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCACAGTTCCAGCTGAGATaGCAGACTTTGGGGGATATA +
Preference number: 3 (lower is better)
Translates to: HRFLQIPPTCAQKWSCSPQFQLR*QTLGDI
Trigger: TATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTG...TGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR CAA 90 bp GGTTACATTTGCTTTATGCTGCTTTGGCAAGAGCGCATCTGGAACAATGCATACTCCTCTGCAGACACGTaGGCATTGCCGGAATTAAAG +
Preference number: 3 (lower is better)
Translates to: GYICFMLLWQERIWNNAYSSADT*ALPELK
Trigger: CTTTAATTCCGGCAATGCCAACGTGTCTGCAGAGGA...GTATGCATTGTTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAAATGTAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646663.1
3UTR GCA 72 bp GAGGGAGCCTTCTTCCTAAGGGTTACATTTGCTTTATaGTGCTTTGGCAAGAGCGCATCTGGAACAATGCAT +
Preference number: 3 (lower is better)
Translates to: EGAFFLRVTFAL*CFGKSASGTMH
Trigger: ATGCATTGTTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAAATGTAACCCTTAGGAAGAAGGCTCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646663.1
3UTR-3UTR CAA 90 bp CAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGATTCCACCAACATGCTGAGATTGCAGACTTaGGGGGATATACACATTCAG +
Preference number: 3 (lower is better)
Translates to: QPRQERNVASISADSTNMLRLQT*GDIHIQ
Trigger: CTGAATGTGTATATCCCCCAAAGTCTGCAATCTCAG...CATGTTGGTGGAATCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR-3UTR CAA 90 bp CATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCACTGAGATTGCAGACTTaGGGGGATATACACATTCAG +
Preference number: 3 (lower is better)
Translates to: HRFLQIPPTCAQKWSCSPLRLQT*GDIHIQ
Trigger: CTGAATGTGTATATCCCCCAAAGTCTGCAATCTCAG...TGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR GCA 72 bp TTACTTCTTCCGTGGACCCACACACCTTCATCACTCTaGTTTCATGTACAAACACCTGCGACAATGATGTCA +
Preference number: 3 (lower is better)
Translates to: LLLPWTHTPSSL*FHVQTPATMMS
Trigger: TGACATCATTGTCGCAGGTGTTTGTACATGAAAGCAGAGTGATGAAGGTGTGTGGGTCCACGGAAGAAGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
3UTR GCA 72 bp GGAGCCTTCTTCCTAAGGGTTACATTTGCTTTATGCTaGTTTGGCAAGAGCGCATCTGGAACAATGCATACA +
Preference number: 3 (lower is better)
Translates to: GAFFLRVTFALC*FGKSASGTMHT
Trigger: TGTATGCATTGTTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAAATGTAACCCTTAGGAAGAAGGCTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646663.1
3UTR CCA 72 bp GTAGCTTCTGTGTCCAAAGGAGGTTATTTCAGAGTCTaGACTCTTGTCTCCACTCTAGCATTCTTTGTAGCC +
Preference number: 3 (lower is better)
Translates to: VASVSKGGYFRV*TLVSTLAFFVA
Trigger: GGCTACAAAGAATGCTAGAGTGGAGACAAGAGTCCAGACTCTGAAATAACCTCCTTTGGACACAGAAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
3UTR-3UTR CAA 90 bp TTTGTGCACAGTGCTGTACAAGGTTTTATCCAAGGAGAACTGAGCATGTCTCAACAGCCTCAGTTTCACTaGGGAACTTGTCTGAAATGC +
Preference number: 3 (lower is better)
Translates to: FVHSAVQGFIQGELSMSQQPQFH*GTCLKC
Trigger: GCATTTCAGACAAGTTCCCAAGTGAAACTGAGGCTG...TTGAGACATGCTCAGTTCTCCTTGGATAAAACCTTGTACAGCACTGTGCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
3UTR GCA 72 bp AGCCTGGGGGCTTTTTCTGAGTCATATGGAAACTGCTaGAGGGTGACAATCAGAACCTTACAGAATTATCAA +
Preference number: 3 (lower is better)
Translates to: SLGAFSESYGNC*RVTIRTLQNYQ
Trigger: TTGATAATTCTGTAAGGTTCTGATTGTCACCCTGCAGCAGTTTCCATATGACTCAGAAAAAGCCCCCAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR CCA 72 bp CTTCTTCCTAAGGGTTACATTTGCTTTATGCTGCTTTaGCAAGAGCGCATCTGGAACAATGCATACAGTTTG +
Preference number: 3 (lower is better)
Translates to: LLPKGYICFMLL*QERIWNNAYSL
Trigger: CAAACTGTATGCATTGTTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAAATGTAACCCTTAGGAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646663.1
3UTR CCA 72 bp CTTTCATGTACAAACACCTGCGACAATGATGTCACTTaGATTAGAGGAAAGGTTTCACTGAGATCTTCCTGT +
Preference number: 3 (lower is better)
Translates to: LSCTNTCDNDVT*IRGKVSLRSSC
Trigger: ACAGGAAGATCTCAGTGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACATGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
3UTR-3UTR CAA 90 bp CACAGTGCTGTACAAGGTTTTATCCAAGGAGAACTGAGCATGTCTCAAACTCTGGTTTCACTTGGGAACTaGTCTGAAATGCAAATTCTT +
Preference number: 3 (lower is better)
Translates to: HSAVQGFIQGELSMSQTLVSLGN*SEMQIL
Trigger: AAGAATTTGCATTTCAGACAAGTTCCCAAGTGAAAC...CAGAGTTTGAGACATGCTCAGTTCTCCTTGGATAAAACCTTGTACAGCACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
3UTR-3UTR CAA 90 bp GCATGTCTCAAACTCTGTTTTAAAATAGCAATTTCAGGGCTGATGTACAGCTGCATAATCCATAATCATTaGTTTCTCCCCAAGGCCGTG +
Preference number: 3 (lower is better)
Translates to: ACLKLCFKIAISGLMYSCIIHNH*FLPKAV
Trigger: CACGGCCTTGGGGAGAAACAAATGATTATGGATTAT...GCAGCTGTACATCAGCCCTGAAATTGCTATTTTAAAACAGAGTTTGAGACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645312.1
3UTR TCA 72 bp AGAGAAAGAAAGAATTCCACCTTGCTAAGCAATCCCTaGGCTCAAAGCTTTGATCACACTTCAAAAGAGAAC +
Preference number: 3 (lower is better)
Translates to: RERKNSTLLSNP*AQSFDHTSKEN
Trigger: GTTCTCTTTTGAAGTGTGATCAAAGCTTTGAGCTCAGGGATTGCTTAGCAAGGTGGAATTCTTTCTTTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR-3UTR CAA 90 bp CATTTTGTGACTACGATGCCTATCAATTACAGAGGTCATTTAAACTCTCAAGAGCCTGAGCTCAAAGCTTaGATCACACTTCAAAAGAGA +
Preference number: 3 (lower is better)
Translates to: HFVTTMPINYRGHLNSQEPELKA*ITLQKR
Trigger: TCTCTTTTGAAGTGTGATCAAAGCTTTGAGCTCAGG...CTCTTGAGAGTTTAAATGACCTCTGTAATTGATAGGCATCGTAGTCACAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR-3UTR CAA 90 bp TATACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCGACAGGAAAGAAATGTaGCATCGATTTCTGCAGATT +
Preference number: 3 (lower is better)
Translates to: YTIIQTAQTGKKCCIDFCDRKEM*HRFLQI
Trigger: AATCTGCAGAAATCGATGCAACATTTCTTTCCTGTC...GCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp CCTGTCTTGAGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTGACCAGAGCGGGCGGCTTCTaGCCGCCGGCGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PVLRLVVMGLGWDSGQLTRAGGF*PPACGW
Trigger: CCAGCCACACGCCGGCGGGCAGAAGCCGCCCGCTCT...GGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAGACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CCA 90 bp CCTGTCTTGAGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTGACCGGGAGGGAGAAGCGGTaGTGCGAGCGCTGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: PVLRLVVMGLGWDSGQLTGREKR*CERWPA
Trigger: CGCGGGCCAGCGCTCGCACCACCGCTTCTCCCTCCC...GGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAGACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR GCA 90 bp CTTGGGACTGCAGGGTGCTGTGCGAAGTCCCAAGTCCTGGCCCATCTTGCTAAGAGAGCGGGCGGCTTCTaGCCGCCGGCGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LGTAGCCAKSQVLAHLAKRAGGF*PPACGW
Trigger: CCAGCCACACGCCGGCGGGCAGAAGCCGCCCGCTCT...CTTAGCAAGATGGGCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
CDS-3UTR CCA 90 bp CTTGGGACTGCAGGGTGCTGTGCGAAGTCCCAAGTCCTGGCCCATCTTGCTAAGGGGAGGGAGAAGCGGTaGTGCGAGCGCTGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: LGTAGCCAKSQVLAHLAKGREKR*CERWPA
Trigger: CGCGGGCCAGCGCTCGCACCACCGCTTCTCCCTCCC...CTTAGCAAGATGGGCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
CDS-3UTR GCA 90 bp AAGTGGGGAGGCAGAAGCTGCAGTGGAACTTCCGCAGTTGCAGCTCTAGTTGGGAGAGCGGGCGGCTTCTaGCCGCCGGCGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KWGGRSCSGTSAVAALVGRAGGF*PPACGW
Trigger: CCAGCCACACGCCGGCGGGCAGAAGCCGCCCGCTCT...CCCAACTAGAGCTGCAACTGCGGAAGTTCCACTGCAGCTTCTGCCTCCCCACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR GCA 90 bp CCTAAAGCTTCCCATAAGTCAGTAGCCAGGGGCCTAGTGAGGGAGGGAGCCTTCAGGGAGAAGCGGTGGTaGGAGCGCTGGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: PKASHKSVARGLVREGAFREKRW*ERWPAG
Trigger: TCCCGCGGGCCAGCGCTCGCACCACCGCTTCTCCCT...GAAGGCTCCCTCCCTCACTAGGCCCCTGGCTACTGACTTATGGGAAGCTTTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
CDS-3UTR CCA 90 bp CCTAAAGCTTCCCATAAGTCAGTAGCCAGGGGCCTAGTGAGGGAGGGAGCCTTCGACAGCTCCGCAATATaGCCGCTCGGCGCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: PKASHKSVARGLVREGAFDSSAI*PLGASA
Trigger: CGCGGAGGCGCCGAGCGGCCATATTGCGGAGCTGTC...GAAGGCTCCCTCCCTCACTAGGCCCCTGGCTACTGACTTATGGGAAGCTTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528900.5
ENST00000530301.5
CDS-3UTR CCA 90 bp TCTTCCTGTCTTGAGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTGACAGCTCCGCAATATaGCCGCTCGGCGCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: SSCLEACGDGLGLGLRPADSSAI*PLGASA
Trigger: CGCGGAGGCGCCGAGCGGCCATATTGCGGAGCTGTC...AGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAGACAGGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR CCA 90 bp GATGCTGGCTTGGGACTGCAGGGTGCTGTGCGAAGTCCCAAGTCCTGGCCCATCCATGAGCCAGGGCCCTaGGTAATGGAATACTGGTCC +
Preference number: 4 (lower is better)
Translates to: DAGLGLQGAVRSPKSWPIHEPGP*VMEYWS
Trigger: GGACCAGTATTCCATTACCCAGGGCCCTGGCTCATG...GATGGGCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp CCCTGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGAGGGAGAAGCGGTGGTaGGAGCGCTGGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: PWVMEYWSIQFQLRLQTLREKRW*ERWPAG
Trigger: TCCCGCGGGCCAGCGCTCGCACCACCGCTTCTCCCT...CAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
CDS-3UTR GCA 90 bp ATGCTGGCTTGGGACTGCAGGGTGCTGTGCGAAGTCCCAAGTCCTGGCCCATCTGTCCTGAAGATGGGGTaGAGTAGATGCTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: MLAWDCRVLCEVPSPGPSVLKMG*SRCWLG
Trigger: CCCAAGCCAGCATCTACTGCACCCCATCTTCAGGAC...AGATGGGCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp CTTGAGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTGACCAGGGTTCAGCTTCACTGTCCTaGAGCAGTGGCCTAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LEACGDGLGLGLRPADQGSASLS*SSGLVR
Trigger: CCTCACTAGGCCACTGCTGCAGGACAGTGAAGCTGA...ACCCTGGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530749.5
CDS-3UTR CCA 90 bp GTGGACCCACACACCTTCATCACTCTGCTTTCATGTACAAACACCTGCGACAATCGGTGGTGCGAGCGCTaGCCCGCGGGAGACGAGAGG +
Preference number: 4 (lower is better)
Translates to: VDPHTFITLLSCTNTCDNRWCER*PAGDER
Trigger: CCTCTCGTCTCCCGCGGGCCAGCGCTCGCACCACCG...ATTGTCGCAGGTGTTTGTACATGAAAGCAGAGTGATGAAGGTGTGTGGGTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR CCA 90 bp CTTGAGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTGACCAGGGTTGTTGGAGGAATGACTaGTGGTGGTGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LEACGDGLGLGLRPADQGCWRND*WWWRWR
Trigger: CCTCCACCTCCACCACCACCAGTCATTCCTCCAACA...ACCCTGGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CCA 90 bp ATGCTGGCTTGGGACTGCAGGGTGCTGTGCGAAGTCCCAAGTCCTGGCCCATCTTGTTGGAGGAATGACTaGTGGTGGTGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: MLAWDCRVLCEVPSPGPSCWRND*WWWRWR
Trigger: CCTCCACCTCCACCACCACCAGTCATTCCTCCAACA...AGATGGGCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp CCGCTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCCAAAGGAGGTTATTTAGGGAGAAGCGGTGGTaGGAGCGCTGGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: PLRLISNSGSFCVQRRLFREKRW*ERWPAG
Trigger: TCCCGCGGGCCAGCGCTCGCACCACCGCTTCTCCCT...AAATAACCTCCTTTGGACACAGAAGCTACCACTGTTGCTTATCAGACGCAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR GCA 90 bp CTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCCAAAGGAGGTTATTTCAGAGAGCGGGCGGCTTCTaGCCGCCGGCGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LRLISNSGSFCVQRRLFQRAGGF*PPACGW
Trigger: CCAGCCACACGCCGGCGGGCAGAAGCCGCCCGCTCT...CTGAAATAACCTCCTTTGGACACAGAAGCTACCACTGTTGCTTATCAGACGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR GCA 90 bp CATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCAAGAGCGGGCGGCTTCTaGCCGCCGGCGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: HRFLQIPPTCAQKWSCSPRAGGF*PPACGW
Trigger: CCAGCCACACGCCGGCGGGCAGAAGCCGCCCGCTCT...TGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
CDS-3UTR GCA 90 bp TGCATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACAGAGCGGGCGGCTTCTaGCCGCCGGCGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CIDFCRFHQHVHRNGAVHRAGGF*PPACGW
Trigger: CCAGCCACACGCCGGCGGGCAGAAGCCGCCCGCTCT...GTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
CDS-3UTR GCA 90 bp TATCCTAAAGCTTCCCATAAGTCAGTAGCCAGGGGCCTAGTGAGGGAGGGAGCCGACTGCAGGGTGCTGTaGGAAGTCCCAAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: YPKASHKSVARGLVREGADCRVL*EVPSPG
Trigger: GCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTC...GGCTCCCTCCCTCACTAGGCCCCTGGCTACTGACTTATGGGAAGCTTTAGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp CCCTGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGACAGCTCCGCAATATaGCCGCTCGGCGCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: PWVMEYWSIQFQLRLQTLDSSAI*PLGASA
Trigger: CGCGGAGGCGCCGAGCGGCCATATTGCGGAGCTGTC...CAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528900.5
ENST00000530301.5
CDS-3UTR CCA 90 bp TTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCACTGAGTGGGAGGGAGAAGCGGTaGTGCGAGCGCTGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: FLQIPPTCAQKWSCSPLSGREKR*CERWPA
Trigger: CGCGGGCCAGCGCTCGCACCACCGCTTCTCCCTCCC...ACTCAGTGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
CDS-3UTR CCA 90 bp CAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGATTCCACCAACATGGGGAGGGAGAAGCGGTaGTGCGAGCGCTGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: QPRQERNVASISADSTNMGREKR*CERWPA
Trigger: CGCGGGCCAGCGCTCGCACCACCGCTTCTCCCTCCC...CATGTTGGTGGAATCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
CDS-3UTR TCA 90 bp ACTGATCTGCCAGTGAGAACAACTGCACGGCTCCAGAGCATCTCAGAGGGTCAGGGACTGATCTGCCAGTaGGAACAACTGCACGGCTCC +
Preference number: 4 (lower is better)
Translates to: TDLPVRTTARLQSISEGQGLICQ*EQLHGS
Trigger: GGAGCCGTGCAGTTGTTCTCACTGGCAGATCAGTCC...CTGACCCTCTGAGATGCTCTGGAGCCGTGCAGTTGTTCTCACTGGCAGATCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR GCA 90 bp GCATGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTGGGCTTGGGACTGCAGGGTaGTGTGCGAAGTCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: ACLGDRVLKMGCSRCWLGLGTAG*CAKSQV
Trigger: GACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAG...CCCAAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp TATCCTAAAGCTTCCCATAAGTCAGTAGCCAGGGGCCTAGTGAGGGAGGGAGCCATGCTGGCTTGGGACTaGAGGGTGCTGTGCGAAGTC +
Preference number: 4 (lower is better)
Translates to: YPKASHKSVARGLVREGAMLAWD*RVLCEV
Trigger: GACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCAT...GGCTCCCTCCCTCACTAGGCCCCTGGCTACTGACTTATGGGAAGCTTTAGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp CAGGGCCCGCTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCCAAAGGAGGGGGCTACAAGAACTTTaGCAATGGCCGAGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: QGPLRLISNSGSFCVQRRGLQEL*QWPRAL
Trigger: CAGAGCCCTCGGCCATTGGCAAAGTTCTTGTAGCCC...CCTCCTTTGGACACAGAAGCTACCACTGTTGCTTATCAGACGCAGCGGGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR CCA 90 bp AGAAAAACCCAGGGCCCGCTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCGTGATGGGCTTGGGTTaGGACTCAGGCCAGCTGACC +
Preference number: 4 (lower is better)
Translates to: RKTQGPLRLISNSGSFCVVMGLG*DSGQLT
Trigger: GGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCAC...GACACAGAAGCTACCACTGTTGCTTATCAGACGCAGCGGGCCCTGGGTTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CCA 90 bp TCTTCCTGTCTTGAGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTTGGAAGCAGCCCCAGTaGCAGTATCAGGGCTACAAG +
Preference number: 4 (lower is better)
Translates to: SSCLEACGDGLGLGLRPAWKQPQ*QYQGYK
Trigger: CTTGTAGCCCTGATACTGCCACTGGGGCTGCTTCCA...AGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAGACAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR CCA 90 bp CTTGAGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTGACCAGGGTAAAGTGATCCTCAAGTaGGGAGGCAGAAGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LEACGDGLGLGLRPADQGKVILK*GGRSCS
Trigger: ACTGCAGCTTCTGCCTCCCCACTTGAGGATCACTTT...ACCCTGGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645527.1
3UTR CAA 72 bp TCTTCCTGTCTTGAGGCTTGTGGTGATGGGCTTGGGTaGGGACTCAGGCCAGCTGACCAGGGTTCACTGCTT +
Preference number: 4 (lower is better)
Translates to: SSCLEACGDGLG*GLRPADQGSLL
Trigger: AAGCAGTGAACCCTGGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAGACAGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR TCA 90 bp CCTGTCTTGAGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTGACCGAGGAAAGGTTTCACTaGGATCTTCCTGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: PVLRLVVMGLGWDSGQLTEERFH*DLPVLR
Trigger: CCTCAAGACAGGAAGATCTCAGTGAAACCTTTCCTC...GGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR TCA 90 bp TATCCTAAAGCTTCCCATAAGTCAGTAGCCAGGGGCCTAGTGAGGGAGGGAGCCAAGAGGAGAGAACCATaGGCCAGGGCCCTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: YPKASHKSVARGLVREGAKRREP*ARALGN
Trigger: ATTACCCAGGGCCCTGGCTCATGGTTCTCTCCTCTT...GGCTCCCTCCCTCACTAGGCCCCTGGCTACTGACTTATGGGAAGCTTTAGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp GGACTCAGGCCAGCTGACCAGGGTTCACTGCTTAAGGCCCCAGAAAAACCCAGGGCGCATCTGGAACAATaGATACAGTTTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: GLRPADQGSLLKAPEKPRAHLEQ*IQFGSP
Trigger: TGGGGACCCAAACTGTATGCATTGTTCCAGATGCGC...CCTGGGTTTTTCTGGGGCCTTAAGCAGTGAACCCTGGTCAGCTGGCCTGAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR GCA 90 bp CTTGGGACTGCAGGGTGCTGTGCGAAGTCCCAAGTCCTGGCCCATCTTGCTAAGGCGCATCTGGAACAATaGATACAGTTTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LGTAGCCAKSQVLAHLAKAHLEQ*IQFGSP
Trigger: TGGGGACCCAAACTGTATGCATTGTTCCAGATGCGC...CTTAGCAAGATGGGCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp CCAGCATGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTCTTGGGACTGCAGGGTaGTGTGCGAAGTCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: PACLGDRVLKMGCSRCWLLGTAG*CAKSQV
Trigger: GACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAG...AAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACATGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp TTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTGGGACTGCAGTCCTGAAGATGGGGTaGAGTAGATGCTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: LGDRVLKMGCSRCWLGTAVLKMG*SRCWLG
Trigger: CCCAAGCCAGCATCTACTGCACCCCATCTTCAGGAC...TGCAGTCCCAAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp CAAAGTGATCCTCAAGTGGGGAGGCAGAAGCTGCAGTGGAACTTCCGCAGTTGCTGGGGAGGCAGAAGCTaGAGTGGAACTTCCGCAGTT +
Preference number: 4 (lower is better)
Translates to: QSDPQVGRQKLQWNFRSCWGGRS*SGTSAV
Trigger: AACTGCGGAAGTTCCACTGCAGCTTCTGCCTCCCCA...GCAACTGCGGAAGTTCCACTGCAGCTTCTGCCTCCCCACTTGAGGATCACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR GCA 90 bp TTGGAAGCAGCCCCAGTGGCAGTATCAGGGCTACAAGAACTTTGCCAATGGCCGGCCAGTGAGAACAACTaGACGGCTCCAGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: LEAAPVAVSGLQELCQWPASENN*TAPEHL
Trigger: GAGATGCTCTGGAGCCGTGCAGTTGTTCTCACTGGC...CGGCCATTGGCAAAGTTCTTGTAGCCCTGATACTGCCACTGGGGCTGCTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR CCA 90 bp TGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTTCACTGAGATCTTCCTGTGGGAGGGAGAAGCGGTaGTGCGAGCGCTGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: CDNDVTWIRGKVSLRSSCGREKR*CERWPA
Trigger: CGCGGGCCAGCGCTCGCACCACCGCTTCTCCCTCCC...ACAGGAAGATCTCAGTGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CCA 90 bp CTGCTTTCATGTACAAACACCTGCGACAATGATGTCACTTGGATTAGAGGAAAGGGGAGGGAGAAGCGGTaGTGCGAGCGCTGGCCCGCG +
Preference number: 4 (lower is better)
Translates to: LLSCTNTCDNDVTWIRGKGREKR*CERWPA
Trigger: CGCGGGCCAGCGCTCGCACCACCGCTTCTCCCTCCC...CTTTCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACATGAAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
3UTR CAA 72 bp AGCAGCCCCAGTGGCAGTATCAGGGCTACAAGAACTTaGCCAATGGCCGAGGGCTCTGATAAACCCACCCTT +
Preference number: 4 (lower is better)
Translates to: SSPSGSIRATRT*PMAEGSDKPTL
Trigger: AAGGGTGGGTTTATCAGAGCCCTCGGCCATTGGCAAAGTTCTTGTAGCCCTGATACTGCCACTGGGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR TCA 90 bp CCAGCATGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTCCATCCAGTTCCAGCTaGGATTGCAGACTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PACLGDRVLKMGCSRCWLPSSSS*DCRLWG
Trigger: CCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGG...AAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACATGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp TGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTGGGACTAAGAGGAGAGAACCATaGGCCAGGGCCCTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: CLGDRVLKMGCSRCWLGTKRREP*ARALGN
Trigger: ATTACCCAGGGCCCTGGCTCATGGTTCTCTCCTCTT...AGTCCCAAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp TGTACAAACACCTGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTTCACTGAGGGAGAAGCGGTGGTaGGAGCGCTGGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: CTNTCDNDVTWIRGKVSLREKRW*ERWPAG
Trigger: TCCCGCGGGCCAGCGCTCGCACCACCGCTTCTCCCT...CAGTGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR GCA 90 bp ACCCAGGGCCCGCTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCCAAAGGCTGACCAGGGTTCACTaGTTAAGGCCCCAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: TQGPLRLISNSGSFCVQRLTRVH*LRPQKN
Trigger: GTTTTTCTGGGGCCTTAAGCAGTGAACCCTGGTCAG...CCTTTGGACACAGAAGCTACCACTGTTGCTTATCAGACGCAGCGGGCCCTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR GCA 90 bp ACGGCTCCAGAGCATCTCAGAGGGTCAGTCTTCCAGGCAGCTGGTTTCTTCTCCCTGACCAGGGTTCACTaGTTAAGGCCCCAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: TAPEHLRGSVFQAAGFFSLTRVH*LRPQKN
Trigger: GTTTTTCTGGGGCCTTAAGCAGTGAACCCTGGTCAG...GGAGAAGAAACCAGCTGCCTGGAAGACTGACCCTCTGAGATGCTCTGGAGCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR GCA 90 bp CTGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGACTGCAGGGTGCTGTaGGAAGTCCCAAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: LGNGILVHPVPAEIADFGDCRVL*EVPSPG
Trigger: GCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTC...CCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp CTTGAGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTGACCAGGGTTCATATGGAAACTGCTaGAGGGTGACAATCAGAACC +
Preference number: 4 (lower is better)
Translates to: LEACGDGLGLGLRPADQGSYGNC*RVTIRT
Trigger: GGTTCTGATTGTCACCCTGCAGCAGTTTCCATATGA...ACCCTGGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR GCA 90 bp GGCAGTTCTGCTGCACATTCGAGTGAGAACCACGGGCTAGTGAGGGAGGGAGCCGGAACTTGTCTGAAATaGAAATTCTTGGGCCCCACT +
Preference number: 4 (lower is better)
Translates to: GSSAAHSSENHGLVREGAGTCLK*KFLGPT
Trigger: AGTGGGGCCCAAGAATTTGCATTTCAGACAAGTTCC...GGCTCCCTCCCTCACTAGCCCGTGGTTCTCACTCGAATGTGCAGCAGAACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR CCA 90 bp GGGCCCTGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTCATGAGCCAGGGCCCTaGGTAATGGAATACTGGTCC +
Preference number: 4 (lower is better)
Translates to: GPWVMEYWSIQFQLRLQTHEPGP*VMEYWS
Trigger: GGACCAGTATTCCATTACCCAGGGCCCTGGCTCATG...AGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCAGGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp TTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTGGGACTGCACGAAGTCCCAAGTCCTaGCCCATCTTGCTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LGDRVLKMGCSRCWLGTARSPKS*PILLRS
Trigger: AGACCTTAGCAAGATGGGCCAGGACTTGGGACTTCG...TGCAGTCCCAAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp CTGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGGGTGCAGTAGATGCTaGCTTGGGACTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LGNGILVHPVPAEIADFGGCSRC*LGTAGC
Trigger: GCACCCTGCAGTCCCAAGCCAGCATCTACTGCACCC...CCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp GGACTCAGGCCAGCTGACCAGGGTTCACTGCTTAAGGCCCCAGAAAAACCCAGGCCAAAATCCGCTTATTaGTTCTCAGACGAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: GLRPADQGSLLKAPEKPRPKSAY*FSDEVH
Trigger: ATGCACCTCGTCTGAGAATCAATAAGCGGATTTTGG...CCTGGGTTTTTCTGGGGCCTTAAGCAGTGAACCCTGGTCAGCTGGCCTGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR TCA 90 bp ATGCTGGCTTGGGACTGCAGGGTGCTGTGCGAAGTCCCAAGTCCTGGCCCATCTAATCCAACAGTAAACTaGGAAGAGGAGAGAACCATG +
Preference number: 4 (lower is better)
Translates to: MLAWDCRVLCEVPSPGPSNPTVN*EEERTM
Trigger: CATGGTTCTCTCCTCTTCTCAGTTTACTGTTGGATT...AGATGGGCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp CAGGGCCCGCTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCCAAAGGAGGAGTCTTGAGCTTCTTTaGATGTTGGAAGCAGCCCCA +
Preference number: 4 (lower is better)
Translates to: QGPLRLISNSGSFCVQRRSLELL*MLEAAP
Trigger: TGGGGCTGCTTCCAACATTCAAAGAAGCTCAAGACT...CCTCCTTTGGACACAGAAGCTACCACTGTTGCTTATCAGACGCAGCGGGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR TCA 90 bp ACGGCTCCAGAGCATCTCAGAGGGTCAGTCTTCCAGGCAGCTGGTTTCTTCTCCACAAATCCATCAAAGTaGTCCTCAAGTGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TAPEHLRGSVFQAAGFFSTNPSK*SSSGEA
Trigger: TGCCTCCCCACTTGAGGATCACTTTGATGGATTTGT...GGAGAAGAAACCAGCTGCCTGGAAGACTGACCCTCTGAGATGCTCTGGAGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR GCA 90 bp TGGAAACTGCTGCAGGGTGACAATCAGAACCTTACAGAATTATCAAGTGTGAAAAGGGAGAAGCGGTGGTaGGAGCGCTGGCCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: WKLLQGDNQNLTELSSVKREKRW*ERWPAG
Trigger: TCCCGCGGGCCAGCGCTCGCACCACCGCTTCTCCCT...TTTCACACTTGATAATTCTGTAAGGTTCTGATTGTCACCCTGCAGCAGTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR GCA 90 bp TCCTGTCTTGAGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTGACTTTGGGTCCCCACATTaGTTCAAACTCATCGATACG +
Preference number: 4 (lower is better)
Translates to: SCLEACGDGLGLGLRPADFGSPH*FKLIDT
Trigger: CGTATCGATGAGTTTGAAGCAATGTGGGGACCCAAA...GTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAGACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR GCA 90 bp AGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTGACCAGGGTTCACTCATGTACAAACACCTaGGACAATGATGTCACTTGG +
Preference number: 4 (lower is better)
Translates to: RLVVMGLGWDSGQLTRVHSCTNT*DNDVTW
Trigger: CCAAGTGACATCATTGTCGCAGGTGTTTGTACATGA...GTGAACCCTGGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR GCA 90 bp TGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGATGCTGGCTTGGGACTaGAGGGTGCTGTGCGAAGTC +
Preference number: 4 (lower is better)
Translates to: WVMEYWSIQFQLRLQTLGMLAWD*RVLCEV
Trigger: GACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCAT...CCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp CCCTGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGATGCTGGCTTGGGACTaGAGGGTGCTGTGCGAAGTC +
Preference number: 4 (lower is better)
Translates to: PWVMEYWSIQFQLRLQTLMLAWD*RVLCEV
Trigger: GACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCAT...CAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp CTTGAGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTGACCAGGGTTGTTCCAATACACGCTaGGGTAGGAGTCTATCATTA +
Preference number: 4 (lower is better)
Translates to: LEACGDGLGLGLRPADQGCSNTR*GRSLSL
Trigger: TAATGATAGACTCCTACCCCAGCGTGTATTGGAACA...ACCCTGGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CCA 90 bp GGGCCCTGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTCGAAGTCCCAAGTCCTaGCCCATCTTGCTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: GPWVMEYWSIQFQLRLQTRSPKS*PILLRS
Trigger: AGACCTTAGCAAGATGGGCCAGGACTTGGGACTTCG...AGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCAGGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR CAA 72 bp GTTTGGGTCCCCACCTCCTCTGCAGACACGTTGGCATaGCCGGAATTAAAGAGGTCAATTTCAGCCCTACTC +
Preference number: 4 (lower is better)
Translates to: VWVPTSSADTLA*PELKRSISALL
Trigger: GAGTAGGGCTGAAATTGACCTCTTTAATTCCGGCAATGCCAACGTGTCTGCAGAGGAGGTGGGGACCCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646663.1
3UTR CAA 72 bp CTTTGGCAAGAGCGCATCTGGAACAATGCATACAGTTaGGGTCCCCACCTCCTCTGCAGACACGTTGGCATT +
Preference number: 4 (lower is better)
Translates to: LWQERIWNNAYS*GPHLLCRHVGI
Trigger: AATGCCAACGTGTCTGCAGAGGAGGTGGGGACCCAAACTGTATGCATTGTTCCAGATGCGCTCTTGCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646663.1
CDS-3UTR TCA 90 bp AGGGACAGGACTGATCTGCCAGTGAGAACAACTGCACGGCTCCAGAGCATCTCAGAGGAAAGGTTTCACTaGGATCTTCCTGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: RDRTDLPVRTTARLQSISEERFH*DLPVLR
Trigger: CCTCAAGACAGGAAGATCTCAGTGAAACCTTTCCTC...TGAGATGCTCTGGAGCCGTGCAGTTGTTCTCACTGGCAGATCAGTCCTGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR TCA 90 bp CTTGGGACTGCAGGGTGCTGTGCGAAGTCCCAAGTCCTGGCCCATCTTGCTAAGAATCCAACAGTAAACTaGGAAGAGGAGAGAACCATG +
Preference number: 4 (lower is better)
Translates to: LGTAGCCAKSQVLAHLAKNPTVN*EEERTM
Trigger: CATGGTTCTCTCCTCTTCTCAGTTTACTGTTGGATT...CTTAGCAAGATGGGCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp GCATGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTGGGGGAGCTGTTCACCACTaGGTTTGCTCTTGGATTGAA +
Preference number: 4 (lower is better)
Translates to: ACLGDRVLKMGCSRCWLGGAVHH*VCSWIE
Trigger: TTCAATCCAAGAGCAAACTCAGTGGTGAACAGCTCC...CCCAAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp AGAAACTCTGGTAGCGGAGCCCAGCATGTGTGTTTTCACAACTCCTGCAGGCAGCCACTGCTGACATGCTaGATCAGAAACTCTGGTAGC +
Preference number: 4 (lower is better)
Translates to: RNSGSGAQHVCFHNSCRQPLLTC*IRNSGS
Trigger: GCTACCAGAGTTTCTGATTCAGCATGTCAGCAGTGG...CTGCCTGCAGGAGTTGTGAAAACACACATGCTGGGCTCCGCTACCAGAGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR TCA 90 bp TGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGTCTGTCTTCCTCAGCTaGCTCACCTGCCATTCTCCG +
Preference number: 4 (lower is better)
Translates to: WVMEYWSIQFQLRLQTLGSVFLS*LTCHSP
Trigger: CGGAGAATGGCAGGTGAGTCAGCTGAGGAAGACAGA...CCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646663.1
CDS-3UTR GCA 90 bp AGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTGACCAGGGTTCACCCTAAGGGTTACATTTaGTTTATGCTGCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: RLVVMGLGWDSGQLTRVHPKGYI*FMLLWQ
Trigger: TTGCCAAAGCAGCATAAAGCAAATGTAACCCTTAGG...GTGAACCCTGGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR GCA 90 bp CAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGATTCCACCAACATGGACTGCAGGGTGCTGTaGGAAGTCCCAAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: QPRQERNVASISADSTNMDCRVL*EVPSPG
Trigger: GCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTC...CATGTTGGTGGAATCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp GGCAGTTCTGCTGCACATTCGAGTGAGAACCACGGGCTAGTGAGGGAGGGAGCCGCTGTTGACTCATCTTaGTTTCTGCATAGAACAGAA +
Preference number: 4 (lower is better)
Translates to: GSSAAHSSENHGLVREGAAVDSS*FLHRTE
Trigger: TTCTGTTCTATGCAGAAAGCAAGATGAGTCAACAGC...GGCTCCCTCCCTCACTAGCCCGTGGTTCTCACTCGAATGTGCAGCAGAACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR GCA 90 bp TGCATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACGGTCCCCACCTCCTCTaGAGACACGTTGGCATTGCC +
Preference number: 4 (lower is better)
Translates to: CIDFCRFHQHVHRNGAVHGPHLL*RHVGIA
Trigger: GGCAATGCCAACGTGTCTGCAGAGGAGGTGGGGACC...GTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646663.1
CDS-3UTR CCA 90 bp GGACTCAGGCCAGCTGACCAGGGTTCACTGCTTAAGGCCCCAGAAAAACCCAGGTGTTCCAATACACGCTaGGGTAGGAGTCTATCATTA +
Preference number: 4 (lower is better)
Translates to: GLRPADQGSLLKAPEKPRCSNTR*GRSLSL
Trigger: TAATGATAGACTCCTACCCCAGCGTGTATTGGAACA...CCTGGGTTTTTCTGGGGCCTTAAGCAGTGAACCCTGGTCAGCTGGCCTGAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CCA 90 bp GTGTCCAAAGGAGGTTATTTCAGAGTCTGGACTCTTGTCTCCACTCTAGCATTCGTGATGGGCTTGGGTTaGGACTCAGGCCAGCTGACC +
Preference number: 4 (lower is better)
Translates to: VSKGGYFRVWTLVSTLAFVMGLG*DSGQLT
Trigger: GGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCAC...GAATGCTAGAGTGGAGACAAGAGTCCAGACTCTGAAATAACCTCCTTTGGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR CCA 90 bp ACCCAGGGCCCGCTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCCAAAGGTGCTATAACTTTACCTaGGAACAGGGAGAGACTAGG +
Preference number: 4 (lower is better)
Translates to: TQGPLRLISNSGSFCVQRCYNFT*EQGETR
Trigger: CCTAGTCTCTCCCTGTTCCCAGGTAAAGTTATAGCA...CCTTTGGACACAGAAGCTACCACTGTTGCTTATCAGACGCAGCGGGCCCTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR CCA 90 bp TGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGCATGAGCCAGGGCCCTaGGTAATGGAATACTGGTCC +
Preference number: 4 (lower is better)
Translates to: WVMEYWSIQFQLRLQTLGHEPGP*VMEYWS
Trigger: GGACCAGTATTCCATTACCCAGGGCCCTGGCTCATG...CCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp CATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCAGGGTGCAGTAGATGCTaGCTTGGGACTGCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: HRFLQIPPTCAQKWSCSPGCSRC*LGTAGC
Trigger: GCACCCTGCAGTCCCAAGCCAGCATCTACTGCACCC...TGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp GAACAATGCATACAGTTTGGGTCCCCACCTCCTCTGCAGACACGTTGGCATTGCACAATGCATACAGTTTaGGTCCCCACCTCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: EQCIQFGSPPPLQTRWHCTMHTV*VPTSSA
Trigger: TGCAGAGGAGGTGGGGACCCAAACTGTATGCATTGT...GCAATGCCAACGTGTCTGCAGAGGAGGTGGGGACCCAAACTGTATGCATTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646663.1
CDS-3UTR TCA 90 bp CCTGTCTTGAGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTGACCTCTTCTAGTTCTTTCTaGGCTTTAATTGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PVLRLVVMGLGWDSGQLTSSSSF*ALIVCS
Trigger: AGAGCAGACAATTAAAGCTCAGAAAGAACTAGAAGA...GGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR TCA 90 bp CCAGCATGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTTGGGTTCTCATAAGCTaGTGCCTTCCAGCATGTTTG +
Preference number: 4 (lower is better)
Translates to: PACLGDRVLKMGCSRCWLWVLIS*CLPACL
Trigger: CAAACATGCTGGAAGGCATCAGCTTATGAGAACCCA...AAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACATGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp CCAGCATGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTGGAGCTGTTCACCACTaGGTTTGCTCTTGGATTGAA +
Preference number: 4 (lower is better)
Translates to: PACLGDRVLKMGCSRCWLGAVHH*VCSWIE
Trigger: TTCAATCCAAGAGCAAACTCAGTGGTGAACAGCTCC...AAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACATGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp CCGTGGACCCACACACCTTCATCACTCTGCTTTCATGTACAAACACCTGCGACACTGACCAGGGTTCACTaGTTAAGGCCCCAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: PWTHTPSSLCFHVQTPATLTRVH*LRPQKN
Trigger: GTTTTTCTGGGGCCTTAAGCAGTGAACCCTGGTCAG...TGTCGCAGGTGTTTGTACATGAAAGCAGAGTGATGAAGGTGTGTGGGTCCACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR GCA 90 bp CATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCACTTGGGACTGCAGGGTaGTGTGCGAAGTCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: HRFLQIPPTCAQKWSCSPLGTAG*CAKSQV
Trigger: GACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAG...TGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp GAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGGATATACACGTCCTGAAGATGGGGTaGAGTAGATGCTGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: EYWSIQFQLRLQTLGDIHVLKMG*SRCWLG
Trigger: CCCAAGCCAGCATCTACTGCACCCCATCTTCAGGAC...GTGTATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp GAAAAATATGAACTAGTGCTGTATTTTTACTTCTTCCGTGGACCCACACACCTTGACAGCTCCGCAATATaGCCGCTCGGCGCCTCCGCG +
Preference number: 4 (lower is better)
Translates to: EKYELVLYFYFFRGPTHLDSSAI*PLGASA
Trigger: CGCGGAGGCGCCGAGCGGCCATATTGCGGAGCTGTC...AAGGTGTGTGGGTCCACGGAAGAAGTAAAAATACAGCACTAGTTCATATTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR CCA 90 bp TCTTCCTGTCTTGAGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTTGTTCCAATACACGCTaGGGTAGGAGTCTATCATTA +
Preference number: 4 (lower is better)
Translates to: SSCLEACGDGLGLGLRPACSNTR*GRSLSL
Trigger: TAATGATAGACTCCTACCCCAGCGTGTATTGGAACA...AGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAGACAGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CCA 90 bp CCTAAAGCTTCCCATAAGTCAGTAGCCAGGGGCCTAGTGAGGGAGGGAGCCTTCACAATGCATACAGTTTaGGTCCCCACATTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: PKASHKSVARGLVREGAFTMHTV*VPTLLQ
Trigger: TTGAAGCAATGTGGGGACCCAAACTGTATGCATTGT...GAAGGCTCCCTCCCTCACTAGGCCCCTGGCTACTGACTTATGGGAAGCTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
CDS-3UTR CCA 90 bp ACGGCTCCAGAGCATCTCAGAGGGTCAGTCTTCCAGGCAGCTGGTTTCTTCTCCGGTTATTTCAGAGTCTaGACTCTTGTCTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: TAPEHLRGSVFQAAGFFSGYFRV*TLVSTL
Trigger: TAGAGTGGAGACAAGAGTCCAGACTCTGAAATAACC...GGAGAAGAAACCAGCTGCCTGGAAGACTGACCCTCTGAGATGCTCTGGAGCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR CCA 90 bp GGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGGATATACACATGAGCCAGGGCCCTaGGTAATGGAATACTGGTCC +
Preference number: 4 (lower is better)
Translates to: GILVHPVPAEIADFGGYTHEPGP*VMEYWS
Trigger: GGACCAGTATTCCATTACCCAGGGCCCTGGCTCATG...TGTATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR CAA 72 bp CATACAGTTTGGGTCCCCACCTCCTCTGCAGACACGTaGGCATTGCCGGAATTAAAGAGGTCAATTTCAGCC +
Preference number: 4 (lower is better)
Translates to: HTVWVPTSSADT*ALPELKRSISA
Trigger: GGCTGAAATTGACCTCTTTAATTCCGGCAATGCCAACGTGTCTGCAGAGGAGGTGGGGACCCAAACTGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646663.1
CDS-3UTR TCA 90 bp TCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCACTCCATCCAGTTCCAGCTaGGATTGCAGACTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: SISADSTNMCTEMELFTTPSSSS*DCRLWG
Trigger: CCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGG...AGTGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp CAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGATTCCACCAACATGAAGAGGAGAGAACCATaGGCCAGGGCCCTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: QPRQERNVASISADSTNMKRREP*ARALGN
Trigger: ATTACCCAGGGCCCTGGCTCATGGTTCTCTCCTCTT...CATGTTGGTGGAATCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp AAGTGGGGAGGCAGAAGCTGCAGTGGAACTTCCGCAGTTGCAGCTCTAGTTGGGTTCATGTACAGCTTCTaGTTTCTTCACTCTCACCTT +
Preference number: 4 (lower is better)
Translates to: KWGGRSCSGTSAVAALVGFMYSF*FLHSHL
Trigger: AAGGTGAGAGTGAAGAAATCAGAAGCTGTACATGAA...CCCAACTAGAGCTGCAACTGCGGAAGTTCCACTGCAGCTTCTGCCTCCCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR TCA 90 bp ACTCTGGTAGCGGAGCCCAGCATGTGTGTTTTCACAACTCCTGCAGGCAGTTCTACTTGGGAACTTGTCTaGAATGCAAATTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: TLVAEPSMCVFTTPAGSSTWELV*NANSWA
Trigger: GGCCCAAGAATTTGCATTTCAGACAAGTTCCCAAGT...AGAACTGCCTGCAGGAGTTGTGAAAACACACATGCTGGGCTCCGCTACCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR GCA 90 bp TCAGAAACTCTGGTAGCGGAGCCCAGCATGTGTGTTTTCACAACTCCTGCAGGCTTTGGGTCCCCACATTaGTTCAAACTCATCGATACG +
Preference number: 4 (lower is better)
Translates to: SETLVAEPSMCVFTTPAGFGSPH*FKLIDT
Trigger: CGTATCGATGAGTTTGAAGCAATGTGGGGACCCAAA...GCCTGCAGGAGTTGTGAAAACACACATGCTGGGCTCCGCTACCAGAGTTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR GCA 90 bp CAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGATTCCACCAACATGTGCACATGCTGGCTTGGGACTaGAGGGTGCTGTGCGAAGTC +
Preference number: 4 (lower is better)
Translates to: QTGKKCCIDFCRFHQHVHMLAWD*RVLCEV
Trigger: GACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCAT...GTGCACATGTTGGTGGAATCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp CTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCCAAAGGAGGTTATTTCAGTGTTGGAGGAATGACTaGTGGTGGTGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LRLISNSGSFCVQRRLFQCWRND*WWWRWR
Trigger: CCTCCACCTCCACCACCACCAGTCATTCCTCCAACA...CTGAAATAACCTCCTTTGGACACAGAAGCTACCACTGTTGCTTATCAGACGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CCA 90 bp CATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCATGTTGGAGGAATGACTaGTGGTGGTGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HRFLQIPPTCAQKWSCSPCWRND*WWWRWR
Trigger: CCTCCACCTCCACCACCACCAGTCATTCCTCCAACA...TGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp TTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTGGGACTGCAACAATGCATACAGTTTaGGTCCCCACATTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: LGDRVLKMGCSRCWLGTATMHTV*VPTLLQ
Trigger: TTGAAGCAATGTGGGGACCCAAACTGTATGCATTGT...TGCAGTCCCAAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
CDS-3UTR CCA 90 bp GGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGGATATACACGAAGTCCCAAGTCCTaGCCCATCTTGCTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: GILVHPVPAEIADFGGYTRSPKS*PILLRS
Trigger: AGACCTTAGCAAGATGGGCCAGGACTTGGGACTTCG...TGTATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp TGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTGGGACTACATGTGCACAGAAATaGAGCTGTTCACCACTGAGT +
Preference number: 4 (lower is better)
Translates to: CLGDRVLKMGCSRCWLGTTCAQK*SCSPLS
Trigger: ACTCAGTGGTGAACAGCTCCATTTCTGTGCACATGT...AGTCCCAAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp CTTCCGTGGACCCACACACCTTCATCACTCTGCTTTCATGTACAAACACCTGCGCCAAAATCCGCTTATTaGTTCTCAGACGAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: LPWTHTPSSLCFHVQTPAPKSAY*FSDEVH
Trigger: ATGCACCTCGTCTGAGAATCAATAAGCGGATTTTGG...CGCAGGTGTTTGTACATGAAAGCAGAGTGATGAAGGTGTGTGGGTCCACGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR TCA 90 bp GGGCCCTGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTAATCCAACAGTAAACTaGGAAGAGGAGAGAACCATG +
Preference number: 4 (lower is better)
Translates to: GPWVMEYWSIQFQLRLQTNPTVN*EEERTM
Trigger: CATGGTTCTCTCCTCTTCTCAGTTTACTGTTGGATT...AGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCAGGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp AAGTGGGGAGGCAGAAGCTGCAGTGGAACTTCCGCAGTTGCAGCTCTAGTTGGGTTATCAAGTGTGAAATaGAGGCAACACCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: KWGGRSCSGTSAVAALVGLSSVK*RQHQRK
Trigger: TTTCCTTTGGTGTTGCCTTCATTTCACACTTGATAA...CCCAACTAGAGCTGCAACTGCGGAAGTTCCACTGCAGCTTCTGCCTCCCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR TCA 90 bp ACAGAATGCCTTCTCTTAGCCAAGTGTTCCTTGGGTCTTCAGTGTGGTCTCCAGAAGAATTACTCATGCTaGCCGAGGACTGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: TECLLLAKCSLGLQCGLQKNYSC*PRTVCQ
Trigger: CTGGCAAACAGTCCTCGGTCAGCATGAGTAATTCTT...CTGGAGACCACACTGAAGACCCAAGGAACACTTGGCTAAGAGAAGGCATTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR GCA 90 bp GTAGCGGAGCCCAGCATGTGTGTTTTCACAACTCCTGCAGGCAGTTCTGCTGCACCTAAGGGTTACATTTaGTTTATGCTGCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: VAEPSMCVFTTPAGSSAAPKGYI*FMLLWQ
Trigger: TTGCCAAAGCAGCATAAAGCAAATGTAACCCTTAGG...TGCAGCAGAACTGCCTGCAGGAGTTGTGAAAACACACATGCTGGGCTCCGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR GCA 90 bp TATCCTAAAGCTTCCCATAAGTCAGTAGCCAGGGGCCTAGTGAGGGAGGGAGCCCCTAAGGGTTACATTTaGTTTATGCTGCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: YPKASHKSVARGLVREGAPKGYI*FMLLWQ
Trigger: TTGCCAAAGCAGCATAAAGCAAATGTAACCCTTAGG...GGCTCCCTCCCTCACTAGGCCCCTGGCTACTGACTTATGGGAAGCTTTAGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp ACCCAGGGCCCGCTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCCAAAGGTCTTTTCCTTCATCTTaGAATCTCAGGTTGTCCTTA +
Preference number: 4 (lower is better)
Translates to: TQGPLRLISNSGSFCVQRSFPSS*NLRLSL
Trigger: TAAGGACAACCTGAGATTGCAAGATGAAGGAAAAGA...CCTTTGGACACAGAAGCTACCACTGTTGCTTATCAGACGCAGCGGGCCCTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR CCA 90 bp CCAGCATGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTTGTTCCAATACACGCTaGGGTAGGAGTCTATCATTA +
Preference number: 4 (lower is better)
Translates to: PACLGDRVLKMGCSRCWLCSNTR*GRSLSL
Trigger: TAATGATAGACTCCTACCCCAGCGTGTATTGGAACA...AAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACATGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp GGGCCCTGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTACAATGCATACAGTTTaGGTCCCCACATTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: GPWVMEYWSIQFQLRLQTTMHTV*VPTLLQ
Trigger: TTGAAGCAATGTGGGGACCCAAACTGTATGCATTGT...AGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCAGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
CDS-3UTR CCA 90 bp CTTTGTAGCCCAGGGCAGGGGCATTTTAAGTCAGCTTCACTGTCCTGCAGCAGTACAATGCATACAGTTTaGGTCCCCACATTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: LCSPGQGHFKSASLSCSSTMHTV*VPTLLQ
Trigger: TTGAAGCAATGTGGGGACCCAAACTGTATGCATTGT...ACTGCTGCAGGACAGTGAAGCTGACTTAAAATGCCCCTGCCCTGGGCTACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000530749.5
CDS-3UTR CCA 90 bp TTGGCATTGCCGGAATTAAAGAGGTCAATTTCAGCCCTACTCTCTCTGGTCTGTCGAAGTCCCAAGTCCTaGCCCATCTTGCTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LALPELKRSISALLSLVCRSPKS*PILLRS
Trigger: AGACCTTAGCAAGATGGGCCAGGACTTGGGACTTCG...ACAGACCAGAGAGAGTAGGGCTGAAATTGACCTCTTTAATTCCGGCAATGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646663.1
CDS-3UTR CCA 90 bp CTTTCATGTACAAACACCTGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTACTGTCCTGCAGCAGTaGCCTAGTGAGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: LSCTNTCDNDVTWIRGKVTVLQQ*PSEGGS
Trigger: GCTCCCTCCCTCACTAGGCCACTGCTGCAGGACAGT...AACCTTTCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACATGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530749.5
CDS-3UTR TCA 90 bp GCATGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTGGGTCTTCTAGTTCTTTCTaGGCTTTAATTGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ACLGDRVLKMGCSRCWLGSSSSF*ALIVCS
Trigger: AGAGCAGACAATTAAAGCTCAGAAAGAACTAGAAGA...CCCAAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp TGCATACAGTTTGGGTCCCCACCTCCTCTGCAGACACGTTGGCATTGCCGGAATTCTTCTAGTTCTTTCTaGGCTTTAATTGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CIQFGSPPPLQTRWHCRNSSSSF*ALIVCS
Trigger: AGAGCAGACAATTAAAGCTCAGAAAGAACTAGAAGA...ATTCCGGCAATGCCAACGTGTCTGCAGAGGAGGTGGGGACCCAAACTGTATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646663.1
CDS-3UTR TCA 90 bp AGAAATGTTGCATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCCATCCAGTTCCAGCTaGGATTGCAGACTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: RNVASISADSTNMCTEMEPSSSS*DCRLWG
Trigger: CCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGG...CTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATGCAACATTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp GGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGGATATACATGGGTTCTCATAAGCTaGTGCCTTCCAGCATGTTTG +
Preference number: 4 (lower is better)
Translates to: GILVHPVPAEIADFGGYTWVLIS*CLPACL
Trigger: CAAACATGCTGGAAGGCATCAGCTTATGAGAACCCA...TGTATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp CAAAGTGATCCTCAAGTGGGGAGGCAGAAGCTGCAGTGGAACTTCCGCAGTTGCCAGAATTATCAAGTGTaGAATGAAGGCAACACCAAA +
Preference number: 4 (lower is better)
Translates to: QSDPQVGRQKLQWNFRSCQNYQV*NEGNTK
Trigger: TTTGGTGTTGCCTTCATTTCACACTTGATAATTCTG...GCAACTGCGGAAGTTCCACTGCAGCTTCTGCCTCCCCACTTGAGGATCACTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR GCA 90 bp CTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCCAAAGGAGGTTATTTCAGGCGCATCTGGAACAATaGATACAGTTTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: LRLISNSGSFCVQRRLFQAHLEQ*IQFGSP
Trigger: TGGGGACCCAAACTGTATGCATTGTTCCAGATGCGC...CTGAAATAACCTCCTTTGGACACAGAAGCTACCACTGTTGCTTATCAGACGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR GCA 90 bp TCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCACTGCGCATCTGGAACAATaGATACAGTTTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SISADSTNMCTEMELFTTAHLEQ*IQFGSP
Trigger: TGGGGACCCAAACTGTATGCATTGTTCCAGATGCGC...AGTGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp TACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGGATATACACATTGCGCATCTGGAACAATaGATACAGTTTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: YWSIQFQLRLQTLGDIHIAHLEQ*IQFGSP
Trigger: TGGGGACCCAAACTGTATGCATTGTTCCAGATGCGC...AATGTGTATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp CTGGACTCTTGTCTCCACTCTAGCATTCTTTGTAGCCCTAGTGAGGGAGGGAGCACACCTTCATCACTCTaGTTTCATGTACAAACACCT +
Preference number: 4 (lower is better)
Translates to: LDSCLHSSILCSPSEGGSTPSSL*FHVQTP
Trigger: AGGTGTTTGTACATGAAAGCAGAGTGATGAAGGTGT...GCTCCCTCCCTCACTAGGGCTACAAAGAATGCTAGAGTGGAGACAAGAGTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528498.5
CDS-3UTR GCA 90 bp TCTCAGAGGGTCAGTCTTCCAGGCAGCTGGTTTCTTCTCCCTCTTTTCCTTCATGAGTCATATGGAAACTaGTGCAGGGTGACAATCAGA +
Preference number: 4 (lower is better)
Translates to: SQRVSLPGSWFLLPLFLHESYGN*CRVTIR
Trigger: TCTGATTGTCACCCTGCAGCAGTTTCCATATGACTC...ATGAAGGAAAAGAGGGAGAAGAAACCAGCTGCCTGGAAGACTGACCCTCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR GCA 90 bp AGGGCCCTGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACCTCCGATATATCCATTaGTTCAAACTCATCGATACG +
Preference number: 4 (lower is better)
Translates to: RALGNGILVHPVPAEIADLRYIH*FKLIDT
Trigger: CGTATCGATGAGTTTGAAGCAATGGATATATCGGAG...GTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCAGGGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646663.1
CDS-3UTR CCA 90 bp ACCCAGGGCCCGCTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCCAAAGGTACTCTTACGTTGATTaGTTTCGGCATTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: TQGPLRLISNSGSFCVQRYSYVD*FRHFLS
Trigger: AGAAAGAAAATGCCGAAACCAATCAACGTAAGAGTA...CCTTTGGACACAGAAGCTACCACTGTTGCTTATCAGACGCAGCGGGCCCTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CCA 90 bp CTTCCGTGGACCCACACACCTTCATCACTCTGCTTTCATGTACAAACACCTGCGGGTTATTTCAGAGTCTaGACTCTTGTCTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: LPWTHTPSSLCFHVQTPAGYFRV*TLVSTL
Trigger: TAGAGTGGAGACAAGAGTCCAGACTCTGAAATAACC...CGCAGGTGTTTGTACATGAAAGCAGAGTGATGAAGGTGTGTGGGTCCACGGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR CCA 90 bp AGGGACAGGACTGATCTGCCAGTGAGAACAACTGCACGGCTCCAGAGCATCTCAGACAATGATGTCACTTaGATTAGAGGAAAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: RDRTDLPVRTTARLQSISDNDVT*IRGKVS
Trigger: TGAAACCTTTCCTCTAATCCAAGTGACATCATTGTC...TGAGATGCTCTGGAGCCGTGCAGTTGTTCTCACTGGCAGATCAGTCCTGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR CCA 90 bp CTGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGACATGTGCACAGAAATaGAGCTGTTCACCACTGAGT +
Preference number: 4 (lower is better)
Translates to: LGNGILVHPVPAEIADFGTCAQK*SCSPLS
Trigger: ACTCAGTGGTGAACAGCTCCATTTCTGTGCACATGT...CCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp ATATGGAAACTGCTGCAGGGTGACAATCAGAACCTTACAGAATTATCAAGTGTGGGCAGGAAGATGGCTTaGGGCCGGGAGTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: IWKLLQGDNQNLTELSSVGRKMA*GREFKT
Trigger: GGTTTTGAACTCCCGGCCCCAAGCCATCTTCCTGCC...CACACTTGATAATTCTGTAAGGTTCTGATTGTCACCCTGCAGCAGTTTCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR TCA 90 bp CTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCCAAAGGAGGTTATTTCAGGAGGAAAGGTTTCACTaGGATCTTCCTGTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LRLISNSGSFCVQRRLFQEERFH*DLPVLR
Trigger: CCTCAAGACAGGAAGATCTCAGTGAAACCTTTCCTC...CTGAAATAACCTCCTTTGGACACAGAAGCTACCACTGTTGCTTATCAGACGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR TCA 90 bp TCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCACTTGGGTTCTCATAAGCTaGTGCCTTCCAGCATGTTTG +
Preference number: 4 (lower is better)
Translates to: SISADSTNMCTEMELFTTWVLIS*CLPACL
Trigger: CAAACATGCTGGAAGGCATCAGCTTATGAGAACCCA...AGTGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp TCAGAACACCAGGTATGTCCTTATCCTAAAGCTTCCCATAAGTCAGTAGCCAGGTGGGTTCTCATAAGCTaGTGCCTTCCAGCATGTTTG +
Preference number: 4 (lower is better)
Translates to: SEHQVCPYPKASHKSVARWVLIS*CLPACL
Trigger: CAAACATGCTGGAAGGCATCAGCTTATGAGAACCCA...CCTGGCTACTGACTTATGGGAAGCTTTAGGATAAGGACATACCTGGTGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp CATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCAGGAGCTGTTCACCACTaGGTTTGCTCTTGGATTGAA +
Preference number: 4 (lower is better)
Translates to: HRFLQIPPTCAQKWSCSPGAVHH*VCSWIE
Trigger: TTCAATCCAAGAGCAAACTCAGTGGTGAACAGCTCC...TGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp TGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTTCACTGAGATCTTCCTGTTTGGAGGGACAGGACTaGTCTGCCAGTGAGAACAAC +
Preference number: 4 (lower is better)
Translates to: CDNDVTWIRGKVSLRSSCLEGQD*SASENN
Trigger: GTTGTTCTCACTGGCAGATCAGTCCTGTCCCTCCAA...ACAGGAAGATCTCAGTGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR GCA 90 bp TATACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCGACTGCAGGGTGCTGTaGGAAGTCCCAAGTCCTGGC +
Preference number: 4 (lower is better)
Translates to: YTIIQTAQTGKKCCIDFCDCRVL*EVPSPG
Trigger: GCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTC...GCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp ACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGACTTGGGACTGCAGGGTaGTGTGCGAAGTCCCAAGTC +
Preference number: 4 (lower is better)
Translates to: TIIQTAQTGKKCCIDFCRLGTAG*CAKSQV
Trigger: GACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAG...TCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp AGGGACAGGACTGATCTGCCAGTGAGAACAACTGCACGGCTCCAGAGCATCTCAACTGTCGTACCCAGGTaGTATAAAATGATAAGATTT +
Preference number: 4 (lower is better)
Translates to: RDRTDLPVRTTARLQSISTVVPR*YKMIRF
Trigger: AAATCTTATCATTTTATAGCACCTGGGTACGACAGT...TGAGATGCTCTGGAGCCGTGCAGTTGTTCTCACTGGCAGATCAGTCCTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR GCA 90 bp AGCCCCAGGTTAGCAAAGGAGGCCCAGCTGACTCAGACAGCCTTGAGAACATTGAAAAGTCTTTATTTGTaGACAGTGCTGTACAAGGTT +
Preference number: 4 (lower is better)
Translates to: SPRLAKEAQLTQTALRTLKSLYL*TVLYKV
Trigger: AACCTTGTACAGCACTGTGCACAAATAAAGACTTTT...CAATGTTCTCAAGGCTGTCTGAGTCAGCTGGGCCTCCTTTGCTAACCTGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR CCA 90 bp CTGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGTGTTCCAATACACGCTaGGGTAGGAGTCTATCATTA +
Preference number: 4 (lower is better)
Translates to: LGNGILVHPVPAEIADFGCSNTR*GRSLSL
Trigger: TAATGATAGACTCCTACCCCAGCGTGTATTGGAACA...CCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp GCATGTCTCAAACTCTGTTTTAAAATAGCAATTTCAGGGCTGATGTACAGCTGCTGTTGGAGGAATGACTaGTGGTGGTGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ACLKLCFKIAISGLMYSCCWRND*WWWRWR
Trigger: CCTCCACCTCCACCACCACCAGTCATTCCTCCAACA...GCAGCTGTACATCAGCCCTGAAATTGCTATTTTAAAACAGAGTTTGAGACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR CCA 90 bp CTTTGTAGCCCAGGGCAGGGGCATTTTAAGTCAGCTTCACTGTCCTGCAGCAGTGACAATGATGTCACTTaGATTAGAGGAAAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LCSPGQGHFKSASLSCSSDNDVT*IRGKVS
Trigger: TGAAACCTTTCCTCTAATCCAAGTGACATCATTGTC...ACTGCTGCAGGACAGTGAAGCTGACTTAAAATGCCCCTGCCCTGGGCTACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530749.5
3UTR CAA 72 bp TACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTaGGGGGATATACACATTCAGAACACCAGGTATGTC +
Preference number: 4 (lower is better)
Translates to: YWSIQFQLRLQT*GDIHIQNTRYV
Trigger: GACATACCTGGTGTTCTGAATGTGTATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp TCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCACTCCAAAATCCGCTTATTaGTTCTCAGACGAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: SISADSTNMCTEMELFTTPKSAY*FSDEVH
Trigger: ATGCACCTCGTCTGAGAATCAATAAGCGGATTTTGG...AGTGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp TACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGGATATACACATTCCAAAATCCGCTTATTaGTTCTCAGACGAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: YWSIQFQLRLQTLGDIHIPKSAY*FSDEVH
Trigger: ATGCACCTCGTCTGAGAATCAATAAGCGGATTTTGG...AATGTGTATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp TACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGGATATACACATTTTTAGGAAAGGCAATTaGGAGGGGTCTGGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: YWSIQFQLRLQTLGDIHIFRKGN*EGSGEK
Trigger: TTTCTCTCCAGACCCCTCTCAATTGCCTTTCCTAAA...AATGTGTATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp TCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCACTTTTAGGAAAGGCAATTaGGAGGGGTCTGGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: SISADSTNMCTEMELFTTFRKGN*EGSGEK
Trigger: TTTCTCTCCAGACCCCTCTCAATTGCCTTTCCTAAA...AGTGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp TGCATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACTTTAGGAAAGGCAATTaGGAGGGGTCTGGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: CIDFCRFHQHVHRNGAVHFRKGN*EGSGEK
Trigger: TTTCTCTCCAGACCCCTCTCAATTGCCTTTCCTAAA...GTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp CTTTCATGTACAAACACCTGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTGAATCCAGAGGAGACTaGGGGAAAAGACCCGTCATC +
Preference number: 4 (lower is better)
Translates to: LSCTNTCDNDVTWIRGKVESRGD*GKRPVI
Trigger: GATGACGGGTCTTTTCCCGCAGTCTCCTCTGGATTC...AACCTTTCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACATGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR GCA 90 bp TGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTTCACTGAGATCTTCCTGTTGGAACTTCCGCAGTTaGAGCTCTAGTTGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: CDNDVTWIRGKVSLRSSCWNFRS*SSSWEE
Trigger: CTCTTCCCAACTAGAGCTGCAACTGCGGAAGTTCCA...ACAGGAAGATCTCAGTGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR GCA 90 bp ATTAAGCACCTGCCTGTGTTAGAATTTGTACCAAGCAGCAACAGTCACATCCTTACTGCCTCCATTTATTaGTTACCCGCTGGGGTAGGA +
Preference number: 4 (lower is better)
Translates to: IKHLPVLEFVPSSNSHILTASIY*LPAGVG
Trigger: TCCTACCCCAGCGGGTAAGCAATAAATGGAGGCAGT...AAGGATGTGACTGTTGCTGCTTGGTACAAATTCTAACACAGGCAGGTGCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642511.1
CDS-3UTR GCA 90 bp CACAGTGCTGTACAAGGTTTTATCCAAGGAGAACTGAGCATGTCTCAAACTCTGTGTTTTCACAACTCCTaGAGGCAGTTCTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: HSAVQGFIQGELSMSQTLCFHNS*RQFCCT
Trigger: TGTGCAGCAGAACTGCCTGCAGGAGTTGTGAAAACA...CAGAGTTTGAGACATGCTCAGTTCTCCTTGGATAAAACCTTGTACAGCACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR GCA 90 bp ACTCTGGTAGCGGAGCCCAGCATGTGTGTTTTCACAACTCCTGCAGGCAGTTCTTTTATTTGTGCACAGTaGTGTACAAGGTTTTATCCA +
Preference number: 4 (lower is better)
Translates to: TLVAEPSMCVFTTPAGSSFICAQ*CTRFYP
Trigger: TGGATAAAACCTTGTACAGCACTGTGCACAAATAAA...AGAACTGCCTGCAGGAGTTGTGAAAACACACATGCTGGGCTCCGCTACCAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR CCA 90 bp CCAGCATGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTTACTCTTACGTTGATTaGTTTCGGCATTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PACLGDRVLKMGCSRCWLYSYVD*FRHFLS
Trigger: AGAAAGAAAATGCCGAAACCAATCAACGTAAGAGTA...AAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACATGCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp GAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGGATATACACTGTTCCAATACACGCTaGGGTAGGAGTCTATCATTA +
Preference number: 4 (lower is better)
Translates to: EYWSIQFQLRLQTLGDIHCSNTR*GRSLSL
Trigger: TAATGATAGACTCCTACCCCAGCGTGTATTGGAACA...GTGTATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp TACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGTGTTGGAGGAATGACTaGTGGTGGTGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: YNYTNSPDRKEMLHRFLQCWRND*WWWRWR
Trigger: CCTCCACCTCCACCACCACCAGTCATTCCTCCAACA...CTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp GTCCAGCAGCCTCAGTTTCACTTGGGAACTTGTCTGAAATGCAAATTCTTGGGCACAATGCATACAGTTTaGGTCCCCACATTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: VQQPQFHLGTCLKCKFLGTMHTV*VPTLLQ
Trigger: TTGAAGCAATGTGGGGACCCAAACTGTATGCATTGT...GCCCAAGAATTTGCATTTCAGACAAGTTCCCAAGTGAAACTGAGGCTGCTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR CCA 90 bp TACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGGATATACACATTACATGTGCACAGAAATaGAGCTGTTCACCACTGAGT +
Preference number: 4 (lower is better)
Translates to: YWSIQFQLRLQTLGDIHITCAQK*SCSPLS
Trigger: ACTCAGTGGTGAACAGCTCCATTTCTGTGCACATGT...AATGTGTATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
3UTR CAA 72 bp GTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATaGCAGACTTTGGGGGATATACACATTCAGAACACC +
Preference number: 4 (lower is better)
Translates to: VMEYWSIQFQLR*QTLGDIHIQNT
Trigger: GGTGTTCTGAATGTGTATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp CAGAGTCTGGACTCTTGTCTCCACTCTAGCATTCTTTGTAGCCCTAGTGAGGGATCTTCTAGTTCTTTCTaGGCTTTAATTGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: QSLDSCLHSSILCSPSEGSSSSF*ALIVCS
Trigger: AGAGCAGACAATTAAAGCTCAGAAAGAACTAGAAGA...TCCCTCACTAGGGCTACAAAGAATGCTAGAGTGGAGACAAGAGTCCAGACTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528498.5
CDS-3UTR TCA 90 bp TTCCGTGGACCCACACACCTTCATCACTCTGCTTTCATGTACAAACACCTGCGATCTTCTAGTTCTTTCTaGGCTTTAATTGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: FRGPTHLHHSAFMYKHLRSSSSF*ALIVCS
Trigger: AGAGCAGACAATTAAAGCTCAGAAAGAACTAGAAGA...TCGCAGGTGTTTGTACATGAAAGCAGAGTGATGAAGGTGTGTGGGTCCACGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR TCA 90 bp CTCAGGTTGTCCTTAAATAAACAAATCCATCAAAGTGATCCTCAAGTGGGGAGGGAAACTGCTGCAGGGTaGCAATCAGAACCTTACAGA +
Preference number: 4 (lower is better)
Translates to: LRLSLNKQIHQSDPQVGRETAAG*QSEPYR
Trigger: TCTGTAAGGTTCTGATTGTCACCCTGCAGCAGTTTC...CCTCCCCACTTGAGGATCACTTTGATGGATTTGTTTATTTAAGGACAACCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR GCA 90 bp GCATGTCTCAAACTCTGTTTTAAAATAGCAATTTCAGGGCTGATGTACAGCTGCGCGCATCTGGAACAATaGATACAGTTTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ACLKLCFKIAISGLMYSCAHLEQ*IQFGSP
Trigger: TGGGGACCCAAACTGTATGCATTGTTCCAGATGCGC...GCAGCTGTACATCAGCCCTGAAATTGCTATTTTAAAACAGAGTTTGAGACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR GCA 90 bp CCGCTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCCAAAGGAGGTTATTTCCTAAGGGTTACATTTaGTTTATGCTGCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: PLRLISNSGSFCVQRRLFPKGYI*FMLLWQ
Trigger: TTGCCAAAGCAGCATAAAGCAAATGTAACCCTTAGG...AAATAACCTCCTTTGGACACAGAAGCTACCACTGTTGCTTATCAGACGCAGCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR GCA 90 bp GTGGACCCACACACCTTCATCACTCTGCTTTCATGTACAAACACCTGCGACAATACACCTTCATCACTCTaGTTTCATGTACAAACACCT +
Preference number: 4 (lower is better)
Translates to: VDPHTFITLLSCTNTCDNTPSSL*FHVQTP
Trigger: AGGTGTTTGTACATGAAAGCAGAGTGATGAAGGTGT...ATTGTCGCAGGTGTTTGTACATGAAAGCAGAGTGATGAAGGTGTGTGGGTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR GCA 90 bp CTGAAATGCAAATTCTTGGGCCCCACTGCTGACATGCTGAATCAGAAACTCTGGGGAACAATAACAGAATaGCTTCTCTTAGCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: LKCKFLGPTADMLNQKLWGTITE*LLLAKC
Trigger: ACACTTGGCTAAGAGAAGGCATTCTGTTATTGTTCC...CCAGAGTTTCTGATTCAGCATGTCAGCAGTGGGGCCCAAGAATTTGCATTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR CCA 90 bp CTGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGTTCTCTAATTGTGCCTaGTTTCGGCATTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LGNGILVHPVPAEIADFGFSNCA*FRHFLS
Trigger: AGAAAGAAAATGCCGAAACCAGGCACAATTAGAGAA...CCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528900.5
CDS-3UTR CCA 90 bp ACTCTGCTTTCATGTACAAACACCTGCGACAATGATGTCACTTGGATTAGAGGACACCCTCTCTTTTATTaGAGGGACAGGACTGATCTG +
Preference number: 4 (lower is better)
Translates to: TLLSCTNTCDNDVTWIRGHPLFY*RDRTDL
Trigger: CAGATCAGTCCTGTCCCTCCAATAAAAGAGAGGGTG...TCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACATGAAAGCAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR TCA 90 bp TGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTTCACTGAGATCTTCCTGTCCAAAATCCGCTTATTaGTTCTCAGACGAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: CDNDVTWIRGKVSLRSSCPKSAY*FSDEVH
Trigger: ATGCACCTCGTCTGAGAATCAATAAGCGGATTTTGG...ACAGGAAGATCTCAGTGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR GCA 90 bp ACTCTGCTTTCATGTACAAACACCTGCGACAATGATGTCACTTGGATTAGAGGATTTGGGTCCCCACATTaGTTCAAACTCATCGATACG +
Preference number: 4 (lower is better)
Translates to: TLLSCTNTCDNDVTWIRGFGSPH*FKLIDT
Trigger: CGTATCGATGAGTTTGAAGCAATGTGGGGACCCAAA...TCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACATGAAAGCAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR GCA 90 bp TGCATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCCTAAGGGTTACATTTaGTTTATGCTGCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: CIDFCRFHQHVHRNGAVHPKGYI*FMLLWQ
Trigger: TTGCCAAAGCAGCATAAAGCAAATGTAACCCTTAGG...GTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp ATCTTCTCCACTTCAAAACTTCATTTTGTGACTACGATGCCTATCAATTACAGATGTTGGAGGAATGACTaGTGGTGGTGGAGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: IFSTSKLHFVTTMPINYRCWRND*WWWRWR
Trigger: CCTCCACCTCCACCACCACCAGTCATTCCTCCAACA...TCTGTAATTGATAGGCATCGTAGTCACAAAATGAAGTTTTGAAGTGGAGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR CCA 90 bp CCGCTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCCAAAGGAGGTTATTTGACAATGATGTCACTTaGATTAGAGGAAAGGTTTCA +
Preference number: 4 (lower is better)
Translates to: PLRLISNSGSFCVQRRLFDNDVT*IRGKVS
Trigger: TGAAACCTTTCCTCTAATCCAAGTGACATCATTGTC...AAATAACCTCCTTTGGACACAGAAGCTACCACTGTTGCTTATCAGACGCAGCGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CCA 90 bp ATATGGAAACTGCTGCAGGGTGACAATCAGAACCTTACAGAATTATCAAGTGTGCAAGAACTTTGCCAATaGCCGAGGGCTCTGATAAAC +
Preference number: 4 (lower is better)
Translates to: IWKLLQGDNQNLTELSSVQELCQ*PRALIN
Trigger: GTTTATCAGAGCCCTCGGCCATTGGCAAAGTTCTTG...CACACTTGATAATTCTGTAAGGTTCTGATTGTCACCCTGCAGCAGTTTCCATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR TCA 90 bp TCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCACTTCTTCTAGTTCTTTCTaGGCTTTAATTGTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SISADSTNMCTEMELFTTSSSSF*ALIVCS
Trigger: AGAGCAGACAATTAAAGCTCAGAAAGAACTAGAAGA...AGTGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp ACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGAGGAGCTGTTCACCACTaGGTTTGCTCTTGGATTGAA +
Preference number: 4 (lower is better)
Translates to: TIIQTAQTGKKCCIDFCRGAVHH*VCSWIE
Trigger: TTCAATCCAAGAGCAAACTCAGTGGTGAACAGCTCC...TCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR TCA 90 bp CCTTGTCAAAGTCTTAAGTTTCTTAAGATGTCACTGTCGTACCCAGGTGCTATACATCACTGGGAGTCTTaGGCTTCTTTGAATGTTGGA +
Preference number: 4 (lower is better)
Translates to: PCQSLKFLKMSLSYPGAIHHWES*ASLNVG
Trigger: TCCAACATTCAAAGAAGCTCAAGACTCCCAGTGATG...TATAGCACCTGGGTACGACAGTGACATCTTAAGAAACTTAAGACTTTGACAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR GCA 90 bp TATACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCGCGCATCTGGAACAATaGATACAGTTTGGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: YTIIQTAQTGKKCCIDFCAHLEQ*IQFGSP
Trigger: TGGGGACCCAAACTGTATGCATTGTTCCAGATGCGC...GCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp ACTCTGCTTTCATGTACAAACACCTGCGACAATGATGTCACTTGGATTAGAGGAACAATGCATACAGTTTaGGTCCCCACATTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: TLLSCTNTCDNDVTWIRGTMHTV*VPTLLQ
Trigger: TTGAAGCAATGTGGGGACCCAAACTGTATGCATTGT...TCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACATGAAAGCAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR CCA 90 bp ACAAACACCTGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTTCACTGAGATTTTTACTTCTTCCGTaGACCCACACACCTTCATCA +
Preference number: 4 (lower is better)
Translates to: TNTCDNDVTWIRGKVSLRFLLLP*THTPSS
Trigger: TGATGAAGGTGTGTGGGTCCACGGAAGAAGTAAAAA...TCTCAGTGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR CCA 90 bp ATTAAGCACCTGCCTGTGTTAGAATTTGTACCAAGCAGCAACAGTCACATCCTTTTATTGCTTACCCGCTaGGGTAGGAGTCTATCATTA +
Preference number: 4 (lower is better)
Translates to: IKHLPVLEFVPSSNSHILLLLTR*GRSLSL
Trigger: TAATGATAGACTCCTACCCCAGCGGGTAAGCAATAA...AAGGATGTGACTGTTGCTGCTTGGTACAAATTCTAACACAGGCAGGTGCTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642511.1
CDS-3UTR TCA 90 bp GCATGTCTCAAACTCTGTTTTAAAATAGCAATTTCAGGGCTGATGTACAGCTGCTTATCCAAGGAGAACTaGGCATGTCTCAAACTCTGT +
Preference number: 4 (lower is better)
Translates to: ACLKLCFKIAISGLMYSCLSKEN*ACLKLC
Trigger: ACAGAGTTTGAGACATGCTCAGTTCTCCTTGGATAA...GCAGCTGTACATCAGCCCTGAAATTGCTATTTTAAAACAGAGTTTGAGACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR GCA 90 bp CTTTCATGTACAAACACCTGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTTCATGTACAAACACCTaGGACAATGATGTCACTTGG +
Preference number: 4 (lower is better)
Translates to: LSCTNTCDNDVTWIRGKVSCTNT*DNDVTW
Trigger: CCAAGTGACATCATTGTCGCAGGTGTTTGTACATGA...AACCTTTCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACATGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CCA 90 bp TGCATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACTACTCTTACGTTGATTaGTTTCGGCATTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: CIDFCRFHQHVHRNGAVHYSYVD*FRHFLS
Trigger: AGAAAGAAAATGCCGAAACCAATCAACGTAAGAGTA...GTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp TACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGGATATACACATTTACTCTTACGTTGATTaGTTTCGGCATTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: YWSIQFQLRLQTLGDIHIYSYVD*FRHFLS
Trigger: AGAAAGAAAATGCCGAAACCAATCAACGTAAGAGTA...AATGTGTATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp TCATGTACAAACACCTGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTTCATTTTTACTTCTTCCGTaGACCCACACACCTTCATCA +
Preference number: 4 (lower is better)
Translates to: SCTNTCDNDVTWIRGKVSFLLLP*THTPSS
Trigger: TGATGAAGGTGTGTGGGTCCACGGAAGAAGTAAAAA...TGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR GCA 90 bp TATACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCTTTGGGTCCCCACATTaGTTCAAACTCATCGATACG +
Preference number: 4 (lower is better)
Translates to: YTIIQTAQTGKKCCIDFCFGSPH*FKLIDT
Trigger: CGTATCGATGAGTTTGAAGCAATGTGGGGACCCAAA...GCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
CDS-3UTR GCA 90 bp ATACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCATTTGGGTCCCCACATTaGTTCAAACTCATCGATACG +
Preference number: 4 (lower is better)
Translates to: IQLYKQPRQERNVASISAFGSPH*FKLIDT
Trigger: CGTATCGATGAGTTTGAAGCAATGTGGGGACCCAAA...TGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
CDS-3UTR GCA 90 bp ACACATTCAGAACACCAGGTATGTCCTTATCCTAAAGCTTCCCATAAGTCAGTACCTAAGGGTTACATTTaGTTTATGCTGCTTTGGCAA +
Preference number: 4 (lower is better)
Translates to: THSEHQVCPYPKASHKSVPKGYI*FMLLWQ
Trigger: TTGCCAAAGCAGCATAAAGCAAATGTAACCCTTAGG...TACTGACTTATGGGAAGCTTTAGGATAAGGACATACCTGGTGTTCTGAATGTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR GCA 90 bp GAAAAATATGAACTAGTGCTGTATTTTTACTTCTTCCGTGGACCCACACACCTTTCATGTACAAACACCTaGGACAATGATGTCACTTGG +
Preference number: 4 (lower is better)
Translates to: EKYELVLYFYFFRGPTHLSCTNT*DNDVTW
Trigger: CCAAGTGACATCATTGTCGCAGGTGTTTGTACATGA...AAGGTGTGTGGGTCCACGGAAGAAGTAAAAATACAGCACTAGTTCATATTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR GCA 90 bp ATTAAGCACCTGCCTGTGTTAGAATTTGTACCAAGCAGCAACAGTCACATCCTTAGTCCAAATTATCACTaGCTCCATTTATTGCTTACC +
Preference number: 4 (lower is better)
Translates to: IKHLPVLEFVPSSNSHILSPNYH*LHLLLT
Trigger: GGTAAGCAATAAATGGAGGCAGTGATAATTTGGACT...AAGGATGTGACTGTTGCTGCTTGGTACAAATTCTAACACAGGCAGGTGCTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642511.1
CDS-3UTR CCA 90 bp GAAAAATATGAACTAGTGCTGTATTTTTACTTCTTCCGTGGACCCACACACCTTGGTTATTTCAGAGTCTaGACTCTTGTCTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: EKYELVLYFYFFRGPTHLGYFRV*TLVSTL
Trigger: TAGAGTGGAGACAAGAGTCCAGACTCTGAAATAACC...AAGGTGTGTGGGTCCACGGAAGAAGTAAAAATACAGCACTAGTTCATATTTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR CCA 90 bp ACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGATCCTGCTGTGTTACCTaGTCAAAAAGTTGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: TIIQTAQTGKKCCIDFCRSCCVT*SKSCLP
Trigger: TGGCAAACAACTTTTTGACCAGGTAACACAGCAGGA...TCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530301.5
3UTR CAA 72 bp TACAATTATACAAACAGCCCAGACAGGAAAGAAATGTaGCATCGATTTCTGCAGATTCCACCAACATGTGCA +
Preference number: 4 (lower is better)
Translates to: YNYTNSPDRKEM*HRFLQIPPTCA
Trigger: TGCACATGTTGGTGGAATCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CCA 90 bp ACAAACACCTGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTTCACTGAGAGTTTCAGACATTAGATaGAAGATGTCATTCCAAGAA +
Preference number: 4 (lower is better)
Translates to: TNTCDNDVTWIRGKVSLRVSDIR*KMSFQE
Trigger: TTCTTGGAATGACATCTTCCATCTAATGTCTGAAAC...TCTCAGTGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR TCA 90 bp TTTCTGCATAGAACAGAAATGAGGATAATCCATAATCATTTGTTTCTCCCCAAGGGTTCTTCTGGAGTTTaGGGGAACAATAACAGAATG +
Preference number: 4 (lower is better)
Translates to: FLHRTEMRIIHNHLFLPKGSSGV*GNNNRM
Trigger: CATTCTGTTATTGTTCCCTCAAACTCCAGAAGAACC...CTTGGGGAGAAACAAATGATTATGGATTATCCTCATTTCTGTTCTATGCAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR CCA 90 bp TCATGTACAAACACCTGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTTCATACTCTTACGTTGATTaGTTTCGGCATTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SCTNTCDNDVTWIRGKVSYSYVD*FRHFLS
Trigger: AGAAAGAAAATGCCGAAACCAATCAACGTAAGAGTA...TGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CAA 90 bp ACCCAGGGCCCGCTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCCAAAGGCTTGTGGTGATGGGCTaGGGTTGGGACTCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: TQGPLRLISNSGSFCVQRLVVMG*GWDSGQ
Trigger: CTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAG...CCTTTGGACACAGAAGCTACCACTGTTGCTTATCAGACGCAGCGGGCCCTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CAA 90 bp GATGCTGGCTTGGGACTGCAGGGTGCTGTGCGAAGTCCCAAGTCCTGGCCCATCTGCCTTCCAGCATGTTaGGGGGATAGAGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: DAGLGLQGAVRSPKSWPICLPAC*GDRVLK
Trigger: CTTCAGGACTCTATCCCCCAAACATGCTGGAAGGCA...GATGGGCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp CCTGTCTTGAGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTGACCAGGGCTACAAGAACTTaGCCAATGGCCGAGGGCTCT +
Preference number: 5 (lower is better)
Translates to: PVLRLVVMGLGWDSGQLTRATRT*PMAEGS
Trigger: AGAGCCCTCGGCCATTGGCAAAGTTCTTGTAGCCCT...GGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAGACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR CAA 90 bp CCGTGGACCCACACACCTTCATCACTCTGCTTTCATGTACAAACACCTGCGACAGGTGATGGGCTTGGGTaGGGACTCAGGCCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: PWTHTPSSLCFHVQTPATGDGLG*GLRPAD
Trigger: GTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACC...TGTCGCAGGTGTTTGTACATGAAAGCAGAGTGATGAAGGTGTGTGGGTCCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR CAA 90 bp ATGCTGGCTTGGGACTGCAGGGTGCTGTGCGAAGTCCCAAGTCCTGGCCCATCTGTTTGGGTCCCCACATaGCTTCAAACTCATCGATAC +
Preference number: 5 (lower is better)
Translates to: MLAWDCRVLCEVPSPGPSVWVPT*LQTHRY
Trigger: GTATCGATGAGTTTGAAGCAATGTGGGGACCCAAAC...AGATGGGCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
CDS-3UTR CAA 90 bp GATGCTGGCTTGGGACTGCAGGGTGCTGTGCGAAGTCCCAAGTCCTGGCCCATCCTGAGATTGCAGACTTaGGGGGATATACACATTCAG +
Preference number: 5 (lower is better)
Translates to: DAGLGLQGAVRSPKSWPILRLQT*GDIHIQ
Trigger: CTGAATGTGTATATCCCCCAAAGTCTGCAATCTCAG...GATGGGCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp GGCAGTTCTGCTGCACATTCGAGTGAGAACCACGGGCTAGTGAGGGAGGGAGCCCAGCCTCAGTTTCACTaGGGAACTTGTCTGAAATGC +
Preference number: 5 (lower is better)
Translates to: GSSAAHSSENHGLVREGAQPQFH*GTCLKC
Trigger: GCATTTCAGACAAGTTCCCAAGTGAAACTGAGGCTG...GGCTCCCTCCCTCACTAGCCCGTGGTTCTCACTCGAATGTGCAGCAGAACTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR CAA 90 bp TGCATACAGTTTGGGTCCCCACCTCCTCTGCAGACACGTTGGCATTGCCGGAATTCCTCTGCAGACACGTaGGCATTGCCGGAATTAAAG +
Preference number: 5 (lower is better)
Translates to: CIQFGSPPPLQTRWHCRNSSADT*ALPELK
Trigger: CTTTAATTCCGGCAATGCCAACGTGTCTGCAGAGGA...ATTCCGGCAATGCCAACGTGTCTGCAGAGGAGGTGGGGACCCAAACTGTATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646663.1
CDS-3UTR CAA 90 bp CTTGAGGCTTGTGGTGATGGGCTTGGGTTGGGACTCAGGCCAGCTGACCAGGGTGTAGTTACTCTTACGTaGATTGGTTTCGGCATTTTC +
Preference number: 5 (lower is better)
Translates to: LEACGDGLGLGLRPADQGVVTLT*IGFGIF
Trigger: GAAAATGCCGAAACCAATCAACGTAAGAGTAACTAC...ACCCTGGTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAGCCTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CAA 90 bp CCCAGGTTAGCAAAGGAGGCCCAGCTGACTCAGACAGCCTTGAGAACATTGGGTGTTTGGGTCCCCACATaGCTTCAAACTCATCGATAC +
Preference number: 5 (lower is better)
Translates to: PRLAKEAQLTQTALRTLGVWVPT*LQTHRY
Trigger: GTATCGATGAGTTTGAAGCAATGTGGGGACCCAAAC...ACCCAATGTTCTCAAGGCTGTCTGAGTCAGCTGGGCCTCCTTTGCTAACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR CAA 90 bp CTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCCAAAGGAGGTTATTTCAGCTTGTGGTGATGGGCTaGGGTTGGGACTCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: LRLISNSGSFCVQRRLFQLVVMG*GWDSGQ
Trigger: CTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAG...CTGAAATAACCTCCTTTGGACACAGAAGCTACCACTGTTGCTTATCAGACGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CAA 90 bp ATGCTGGCTTGGGACTGCAGGGTGCTGTGCGAAGTCCCAAGTCCTGGCCCATCTGACAGGAAAGAAATGTaGCATCGATTTCTGCAGATT +
Preference number: 5 (lower is better)
Translates to: MLAWDCRVLCEVPSPGPSDRKEM*HRFLQI
Trigger: AATCTGCAGAAATCGATGCAACATTTCTTTCCTGTC...AGATGGGCCAGGACTTGGGACTTCGCACAGCACCCTGCAGTCCCAAGCCAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp CCAGCATGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTTTGCTTTATGCTGCTTaGGCAAGAGCGCATCTGGAA +
Preference number: 5 (lower is better)
Translates to: PACLGDRVLKMGCSRCWLLLYAA*ARAHLE
Trigger: TTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAA...AAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACATGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp ACTCTGCTTTCATGTACAAACACCTGCGACAATGATGTCACTTGGATTAGAGGAGGTGATGGGCTTGGGTaGGGACTCAGGCCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: TLLSCTNTCDNDVTWIRGGDGLG*GLRPAD
Trigger: GTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACC...TCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACATGAAAGCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CAA 90 bp TGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGTGCCTTCCAGCATGTTaGGGGGATAGAGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: WVMEYWSIQFQLRLQTLGCLPAC*GDRVLK
Trigger: CTTCAGGACTCTATCCCCCAAACATGCTGGAAGGCA...CCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp ACGGCTCCAGAGCATCTCAGAGGGTCAGTCTTCCAGGCAGCTGGTTTCTTCTCCCTCTTTTCCTTCATCTaGCAATCTCAGGTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: TAPEHLRGSVFQAAGFFSLFSFI*QSQVVL
Trigger: AAGGACAACCTGAGATTGCAAGATGAAGGAAAAGAG...GGAGAAGAAACCAGCTGCCTGGAAGACTGACCCTCTGAGATGCTCTGGAGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS GCA 90 bp CAGTGGCCTAGTGAGGGAGGGAGCCTTCTTCCTAAGGGTTACATTTaGTTTATGCTGCTTTGGCAAGAGCGCATCTGGAACAATGCATAC +
Preference number: 5 (lower is better)
Translates to: QWPSEGGSLLPKGYI*FMLLWQERIWNNAY
Trigger: GTATGCATTGTTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAAATGTAACCCTTAGGAAGAAGGCTCCCTCCCTCACTAGGCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530749.5
CDS-3UTR CAA 90 bp CCGTGGACCCACACACCTTCATCACTCTGCTTTCATGTACAAACACCTGCGACAGTTTGGGTCCCCACATaGCTTCAAACTCATCGATAC +
Preference number: 5 (lower is better)
Translates to: PWTHTPSSLCFHVQTPATVWVPT*LQTHRY
Trigger: GTATCGATGAGTTTGAAGCAATGTGGGGACCCAAAC...TGTCGCAGGTGTTTGTACATGAAAGCAGAGTGATGAAGGTGTGTGGGTCCACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR CAA 90 bp TCATGTACAAACACCTGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTTCAGGTGATGGGCTTGGGTaGGGACTCAGGCCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: SCTNTCDNDVTWIRGKVSGDGLG*GLRPAD
Trigger: GTCAGCTGGCCTGAGTCCCAACCCAAGCCCATCACC...TGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CAA 90 bp ACAAACACCTGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTTCACTGAGACTTGTGGTGATGGGCTaGGGTTGGGACTCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: TNTCDNDVTWIRGKVSLRLVVMG*GWDSGQ
Trigger: CTGGCCTGAGTCCCAACCCAAGCCCATCACCACAAG...TCTCAGTGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CAA 90 bp CATCAAAGTGATCCTCAAGTGGGGAGGCAGAAGCTGCAGTGGAACTTCCGCAGTTCATCACTGGGAGTCTaGAGCTTCTTTGAATGTTGG +
Preference number: 5 (lower is better)
Translates to: HQSDPQVGRQKLQWNFRSSSLGV*SFFECW
Trigger: CCAACATTCAAAGAAGCTCAAGACTCCCAGTGATGA...ACTGCGGAAGTTCCACTGCAGCTTCTGCCTCCCCACTTGAGGATCACTTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS GCA 90 bp TGTAGCCCTAGTGAGGGAGGGAGCCTTCTTCCTAAGGGTTACATTTaGTTTATGCTGCTTTGGCAAGAGCGCATCTGGAACAATGCATAC +
Preference number: 5 (lower is better)
Translates to: CSPSEGGSLLPKGYI*FMLLWQERIWNNAY
Trigger: GTATGCATTGTTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAAATGTAACCCTTAGGAAGAAGGCTCCCTCCCTCACTAGGGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528498.5
CDS-3UTR CAA 90 bp TGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGCAGTTCCAGCTGAGATaGCAGACTTTGGGGGATATA +
Preference number: 5 (lower is better)
Translates to: WVMEYWSIQFQLRLQTLGQFQLR*QTLGDI
Trigger: TATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTG...CCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp TATCCTAAAGCTTCCCATAAGTCAGTAGCCAGGGGCCTAGTGAGGGAGGGAGCCGACAGGAAAGAAATGTaGCATCGATTTCTGCAGATT +
Preference number: 5 (lower is better)
Translates to: YPKASHKSVARGLVREGADRKEM*HRFLQI
Trigger: AATCTGCAGAAATCGATGCAACATTTCTTTCCTGTC...GGCTCCCTCCCTCACTAGGCCCCTGGCTACTGACTTATGGGAAGCTTTAGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp CAAAGTGATCCTCAAGTGGGGAGGCAGAAGCTGCAGTGGAACTTCCGCAGTTGCAAGCATTCAGTTGCTTaGTCAGCAATCTCAGTATTC +
Preference number: 5 (lower is better)
Translates to: QSDPQVGRQKLQWNFRSCKHSVA*SAISVF
Trigger: GAATACTGAGATTGCTGACAAAGCAACTGAATGCTT...GCAACTGCGGAAGTTCCACTGCAGCTTCTGCCTCCCCACTTGAGGATCACTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR CAA 90 bp AGCATGTGTGTTTTCACAACTCCTGCAGGCAGTTCTGCTGCACATTCGAGTGAGCTGACTCAGACAGCCTaGAGAACATTGGGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: SMCVFTTPAGSSAAHSSELTQTA*RTLGSS
Trigger: AGAAGAACCCAATGTTCTCAAGGCTGTCTGAGTCAG...CTCACTCGAATGTGCAGCAGAACTGCCTGCAGGAGTTGTGAAAACACACATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR CAA 90 bp TGTTTGGGGGATAGAGTCCTGAAGATGGGGTGCAGTAGATGCTGGCTTGGGACTGTAGTTACTCTTACGTaGATTGGTTTCGGCATTTTC +
Preference number: 5 (lower is better)
Translates to: CLGDRVLKMGCSRCWLGTVVTLT*IGFGIF
Trigger: GAAAATGCCGAAACCAATCAACGTAAGAGTAACTAC...AGTCCCAAGCCAGCATCTACTGCACCCCATCTTCAGGACTCTATCCCCCAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp GTGGACCCACACACCTTCATCACTCTGCTTTCATGTACAAACACCTGCGACAATTTGCTTTATGCTGCTTaGGCAAGAGCGCATCTGGAA +
Preference number: 5 (lower is better)
Translates to: VDPHTFITLLSCTNTCDNLLYAA*ARAHLE
Trigger: TTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAA...ATTGTCGCAGGTGTTTGTACATGAAAGCAGAGTGATGAAGGTGTGTGGGTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR CAA 90 bp GGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGGATATACATTGCTTTATGCTGCTTaGGCAAGAGCGCATCTGGAA +
Preference number: 5 (lower is better)
Translates to: GILVHPVPAEIADFGGYTLLYAA*ARAHLE
Trigger: TTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAA...TGTATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp GGGCCCTGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTGACAGGAAAGAAATGTaGCATCGATTTCTGCAGATT +
Preference number: 5 (lower is better)
Translates to: GPWVMEYWSIQFQLRLQTDRKEM*HRFLQI
Trigger: AATCTGCAGAAATCGATGCAACATTTCTTTCCTGTC...AGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCAGGGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp ATATGGAAACTGCTGCAGGGTGACAATCAGAACCTTACAGAATTATCAAGTGTGAGGCAGGAAGATGGCTaGGGGCCGGGAGTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: IWKLLQGDNQNLTELSSVRQEDG*GPGVQN
Trigger: GTTTTGAACTCCCGGCCCCAAGCCATCTTCCTGCCT...CACACTTGATAATTCTGTAAGGTTCTGATTGTCACCCTGCAGCAGTTTCCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR CAA 90 bp ATTAAGCACCTGCCTGTGTTAGAATTTGTACCAAGCAGCAACAGTCACATCCTTCACTGCCTCCATTTATaGCTTACCCGCTGGGGTAGG +
Preference number: 5 (lower is better)
Translates to: IKHLPVLEFVPSSNSHILHCLHL*LTRWGR
Trigger: CCTACCCCAGCGGGTAAGCAATAAATGGAGGCAGTG...AAGGATGTGACTGTTGCTGCTTGGTACAAATTCTAACACAGGCAGGTGCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642511.1
CDS-3UTR CAA 90 bp TGCATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACGCAGACACGTTGGCATaGCCGGAATTAAAGAGGTCA +
Preference number: 5 (lower is better)
Translates to: CIDFCRFHQHVHRNGAVHADTLA*PELKRS
Trigger: TGACCTCTTTAATTCCGGCAATGCCAACGTGTCTGC...GTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646663.1
CDS TCA 90 bp AGAGGTCAATTTCAGCCCTACTCTCTCTGGTCTGTCTTCCTCAGCTaGCTCACCTGCCATTCTCCGATATATCCATTGCTTCAAACTCAT +
Preference number: 5 (lower is better)
Translates to: RGQFQPYSLWSVFLS*LTCHSPIYPLLQTH
Trigger: ATGAGTTTGAAGCAATGGATATATCGGAGAATGGCAGGTGAGTCAGCTGAGGAAGACAGACCAGAGAGAGTAGGGCTGAAATTGACCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646663.1
CDS CCA 90 bp GCAACAGTGGTAGCTTCTGTGTCCAAAGGAGGTTATTTCAGAGTCTaGACTCTTGTCTCCACTCTAGCATTCTTTGTAGCCCTGAAGTTG +
Preference number: 5 (lower is better)
Translates to: ATVVASVSKGGYFRV*TLVSTLAFFVALKL
Trigger: CAACTTCAGGGCTACAAAGAATGCTAGAGTGGAGACAAGAGTCCAGACTCTGAAATAACCTCCTTTGGACACAGAAGCTACCACTGTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR CAA 90 bp TCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCACTGTTTGGGTCCCCACATaGCTTCAAACTCATCGATAC +
Preference number: 5 (lower is better)
Translates to: SISADSTNMCTEMELFTTVWVPT*LQTHRY
Trigger: GTATCGATGAGTTTGAAGCAATGTGGGGACCCAAAC...AGTGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
CDS-3UTR CAA 90 bp CTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCCAAAGGAGGTTATTTCAGGTTTGGGTCCCCACATaGCTTCAAACTCATCGATAC +
Preference number: 5 (lower is better)
Translates to: LRLISNSGSFCVQRRLFQVWVPT*LQTHRY
Trigger: GTATCGATGAGTTTGAAGCAATGTGGGGACCCAAAC...CTGAAATAACCTCCTTTGGACACAGAAGCTACCACTGTTGCTTATCAGACGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR CAA 90 bp TGCATCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACTTGCTTTATGCTGCTTaGGCAAGAGCGCATCTGGAA +
Preference number: 5 (lower is better)
Translates to: CIDFCRFHQHVHRNGAVHLLYAA*ARAHLE
Trigger: TTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAA...GTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp TCAGAACACCAGGTATGTCCTTATCCTAAAGCTTCCCATAAGTCAGTAGCCAGGCAGTTCCAGCTGAGATaGCAGACTTTGGGGGATATA +
Preference number: 5 (lower is better)
Translates to: SEHQVCPYPKASHKSVARQFQLR*QTLGDI
Trigger: TATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTG...CCTGGCTACTGACTTATGGGAAGCTTTAGGATAAGGACATACCTGGTGTTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp CAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGATTCCACCAACATGCAGTTCCAGCTGAGATaGCAGACTTTGGGGGATATA +
Preference number: 5 (lower is better)
Translates to: QPRQERNVASISADSTNMQFQLR*QTLGDI
Trigger: TATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTG...CATGTTGGTGGAATCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp TGTGTTTTCACAACTCCTGCAGGCAGTTCTGCTGCACATTCGAGTGAGAACCACATAATCCATAATCATTaGTTTCTCCCCAAGGCCGTG +
Preference number: 5 (lower is better)
Translates to: CVFTTPAGSSAAHSSENHIIHNH*FLPKAV
Trigger: CACGGCCTTGGGGAGAAACAAATGATTATGGATTAT...GTGGTTCTCACTCGAATGTGCAGCAGAACTGCCTGCAGGAGTTGTGAAAACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR CAA 90 bp TGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGGTAGTTACTCTTACGTaGATTGGTTTCGGCATTTTC +
Preference number: 5 (lower is better)
Translates to: WVMEYWSIQFQLRLQTLGVVTLT*IGFGIF
Trigger: GAAAATGCCGAAACCAATCAACGTAAGAGTAACTAC...CCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp TCAGAACACCAGGTATGTCCTTATCCTAAAGCTTCCCATAAGTCAGTAGCCAGGAACAATGCATACAGTTaGGGTCCCCACATTGCTTCA +
Preference number: 5 (lower is better)
Translates to: SEHQVCPYPKASHKSVARNNAYS*GPHIAS
Trigger: TGAAGCAATGTGGGGACCCAAACTGTATGCATTGTT...CCTGGCTACTGACTTATGGGAAGCTTTAGGATAAGGACATACCTGGTGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
CDS-3UTR CAA 90 bp TACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGGGATATACACATTCTGAGATTGCAGACTTaGGGGGATATACACATTCAG +
Preference number: 5 (lower is better)
Translates to: YWSIQFQLRLQTLGDIHILRLQT*GDIHIQ
Trigger: CTGAATGTGTATATCCCCCAAAGTCTGCAATCTCAG...AATGTGTATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp TTGGCATTGCCGGAATTAAAGAGGTCAATTTCAGCCCTACTCTCTCTGGTCTGTCTGAGATTGCAGACTTaGGGGGATATACACATTCAG +
Preference number: 5 (lower is better)
Translates to: LALPELKRSISALLSLVCLRLQT*GDIHIQ
Trigger: CTGAATGTGTATATCCCCCAAAGTCTGCAATCTCAG...ACAGACCAGAGAGAGTAGGGCTGAAATTGACCTCTTTAATTCCGGCAATGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646663.1
CDS-3UTR CAA 90 bp TCGATTTCTGCAGATTCCACCAACATGTGCACAGAAATGGAGCTGTTCACCACTCTGAGATTGCAGACTTaGGGGGATATACACATTCAG +
Preference number: 5 (lower is better)
Translates to: SISADSTNMCTEMELFTTLRLQT*GDIHIQ
Trigger: CTGAATGTGTATATCCCCCAAAGTCTGCAATCTCAG...AGTGGTGAACAGCTCCATTTCTGTGCACATGTTGGTGGAATCTGCAGAAATCGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp CCCTGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGACAGGAAAGAAATGTaGCATCGATTTCTGCAGATT +
Preference number: 5 (lower is better)
Translates to: PWVMEYWSIQFQLRLQTLDRKEM*HRFLQI
Trigger: AATCTGCAGAAATCGATGCAACATTTCTTTCCTGTC...CAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp CTGGGTAATGGAATACTGGTCCATCCAGTTCCAGCTGAGATTGCAGACTTTGGGTCTCCGATATATCCATaGCTTCAAACTCATCGATAC +
Preference number: 5 (lower is better)
Translates to: LGNGILVHPVPAEIADFGSPIYP*LQTHRY
Trigger: GTATCGATGAGTTTGAAGCAATGGATATATCGGAGA...CCCAAAGTCTGCAATCTCAGCTGGAACTGGATGGACCAGTATTCCATTACCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646663.1
CDS-3UTR CAA 90 bp ACCTGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTTCACTGAGATCTTCCAACAATGCATACAGTTaGGGTCCCCACATTGCTTCA +
Preference number: 5 (lower is better)
Translates to: TCDNDVTWIRGKVSLRSSNNAYS*GPHIAS
Trigger: TGAAGCAATGTGGGGACCCAAACTGTATGCATTGTT...GGAAGATCTCAGTGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR CAA 90 bp TTTGTGCACAGTGCTGTACAAGGTTTTATCCAAGGAGAACTGAGCATGTCTCAATTGCTTTATGCTGCTTaGGCAAGAGCGCATCTGGAA +
Preference number: 5 (lower is better)
Translates to: FVHSAVQGFIQGELSMSQLLYAA*ARAHLE
Trigger: TTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAA...TTGAGACATGCTCAGTTCTCCTTGGATAAAACCTTGTACAGCACTGTGCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR CAA 90 bp ACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGATGCCTTCCAGCATGTTaGGGGGATAGAGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: TIIQTAQTGKKCCIDFCRCLPAC*GDRVLK
Trigger: CTTCAGGACTCTATCCCCCAAACATGCTGGAAGGCA...TCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp CTGCGTCTGATAAGCAACAGTGGTAGCTTCTGTGTCCAAAGGAGGTTATTTCAGCCTGAGCTCAAAGCTTaGATCACACTTCAAAAGAGA +
Preference number: 5 (lower is better)
Translates to: LRLISNSGSFCVQRRLFQPELKA*ITLQKR
Trigger: TCTCTTTTGAAGTGTGATCAAAGCTTTGAGCTCAGG...CTGAAATAACCTCCTTTGGACACAGAAGCTACCACTGTTGCTTATCAGACGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR CAA 90 bp CATAGAACAGAAATGAGGATAATCCATAATCATTTGTTTCTCCCCAAGGCCGTGTTAGCCAAGTGTTCCTaGGGTCTTCAGTGTGGTCTC +
Preference number: 5 (lower is better)
Translates to: HRTEMRIIHNHLFLPKAVLAKCS*GLQCGL
Trigger: GAGACCACACTGAAGACCCAAGGAACACTTGGCTAA...CACGGCCTTGGGGAGAAACAAATGATTATGGATTATCCTCATTTCTGTTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR CAA 90 bp TGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTTCACTGAGATCTTCCTGTAACAATGCATACAGTTaGGGTCCCCACATTGCTTCA +
Preference number: 5 (lower is better)
Translates to: CDNDVTWIRGKVSLRSSCNNAYS*GPHIAS
Trigger: TGAAGCAATGTGGGGACCCAAACTGTATGCATTGTT...ACAGGAAGATCTCAGTGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR CAA 90 bp TCATGTACAAACACCTGCGACAATGATGTCACTTGGATTAGAGGAAAGGTTTCATTGCTTTATGCTGCTTaGGCAAGAGCGCATCTGGAA +
Preference number: 5 (lower is better)
Translates to: SCTNTCDNDVTWIRGKVSLLYAA*ARAHLE
Trigger: TTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAA...TGAAACCTTTCCTCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528498.5
ENST00000530749.5
CDS-3UTR CAA 90 bp ACACATTCAGAACACCAGGTATGTCCTTATCCTAAAGCTTCCCATAAGTCAGTAAACAATGCATACAGTTaGGGTCCCCACATTGCTTCA +
Preference number: 5 (lower is better)
Translates to: THSEHQVCPYPKASHKSVNNAYS*GPHIAS
Trigger: TGAAGCAATGTGGGGACCCAAACTGTATGCATTGTT...TACTGACTTATGGGAAGCTTTAGGATAAGGACATACCTGGTGTTCTGAATGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
CDS-3UTR CAA 90 bp CATAGAACAGAAATGAGGATAATCCATAATCATTTGTTTCTCCCCAAGGCCGTGAACAATGCATACAGTTaGGGTCCCCACATTGCTTCA +
Preference number: 5 (lower is better)
Translates to: HRTEMRIIHNHLFLPKAVNNAYS*GPHIAS
Trigger: TGAAGCAATGTGGGGACCCAAACTGTATGCATTGTT...CACGGCCTTGGGGAGAAACAAATGATTATGGATTATCCTCATTTCTGTTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS-3UTR CAA 90 bp TACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGCAGTTCCAGCTGAGATaGCAGACTTTGGGGGATATA +
Preference number: 5 (lower is better)
Translates to: YNYTNSPDRKEMLHRFLQQFQLR*QTLGDI
Trigger: TATATCCCCCAAAGTCTGCAATCTCAGCTGGAACTG...CTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000646663.1
ENST00000647231.1
CDS-3UTR CAA 90 bp CTCAGGTTGTCCTTAAATAAACAAATCCATCAAAGTGATCCTCAAGTGGGGAGGGTAGTTACTCTTACGTaGATTGGTTTCGGCATTTTC +
Preference number: 5 (lower is better)
Translates to: LRLSLNKQIHQSDPQVGRVVTLT*IGFGIF
Trigger: GAAAATGCCGAAACCAATCAACGTAAGAGTAACTAC...CCTCCCCACTTGAGGATCACTTTGATGGATTTGTTTATTTAAGGACAACCTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR CAA 90 bp ACAATTATACAAACAGCCCAGACAGGAAAGAAATGTTGCATCGATTTCTGCAGAAACAATGCATACAGTTaGGGTCCCCACATTGCTTCA +
Preference number: 5 (lower is better)
Translates to: TIIQTAQTGKKCCIDFCRNNAYS*GPHIAS
Trigger: TGAAGCAATGTGGGGACCCAAACTGTATGCATTGTT...TCTGCAGAAATCGATGCAACATTTCTTTCCTGTCTGGGCTGTTTGTATAATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528900.5
ENST00000530301.5
ENST00000647231.1
CDS-3UTR CAA 90 bp ATCACTCTGCTTTCATGTACAAACACCTGCGACAATGATGTCACTTGGATTAGAGTAGTTACTCTTACGTaGATTGGTTTCGGCATTTTC +
Preference number: 5 (lower is better)
Translates to: ITLLSCTNTCDNDVTWIRVVTLT*IGFGIF
Trigger: GAAAATGCCGAAACCAATCAACGTAAGAGTAACTAC...TCTAATCCAAGTGACATCATTGTCGCAGGTGTTTGTACATGAAAGCAGAGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528498.5
ENST00000530749.5
ENST00000645527.1
CDS-3UTR CAA 90 bp ATCTTCTCCACTTCAAAACTTCATTTTGTGACTACGATGCCTATCAATTACAGATGTAATCTCAACACTTaGGGAGACCAAGGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: IFSTSKLHFVTTMPINYRCNLNT*GDQGRK
Trigger: CTTCCTGCCTTGGTCTCCCAAAGTGTTGAGATTACA...TCTGTAATTGATAGGCATCGTAGTCACAAAATGAAGTTTTGAAGTGGAGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645527.1
CDS-3UTR CAA 90 bp CATAGAACAGAAATGAGGATAATCCATAATCATTTGTTTCTCCCCAAGGCCGTGGTTTCACTTGGGAACTaGTCTGAAATGCAAATTCTT +
Preference number: 5 (lower is better)
Translates to: HRTEMRIIHNHLFLPKAVVSLGN*SEMQIL
Trigger: AAGAATTTGCATTTCAGACAAGTTCCCAAGTGAAAC...CACGGCCTTGGGGAGAAACAAATGATTATGGATTATCCTCATTTCTGTTCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645312.1
CDS GCA 72 bp CTTTATGCTGCTTTGGCAAGAGCGCATCTGGAACAATaGATACAGTTTGGGTCCCCACATTGCTTCAAACTC +
Preference number: 6 (lower is better)
Translates to: LYAALARAHLEQ*IQFGSPHCFKL
Trigger: GAGTTTGAAGCAATGTGGGGACCCAAACTGTATGCATTGTTCCAGATGCGCTCTTGCCAAAGCAGCATAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528498.5
ENST00000528900.5
ENST00000530301.5
ENST00000530749.5
ENST00000645312.1
ENST00000647231.1
CDS CCA 72 bp TACATTTGCTTTATGCTGCTTTGGCAAGAGCGCATCTaGAACAATGCATACAGTTTGGGTCCCCACATTGCT +
Preference number: 6 (lower is better)
Translates to: YICFMLLWQERI*NNAYSLGPHIA
Trigger: AGCAATGTGGGGACCCAAACTGTATGCATTGTTCCAGATGCGCTCTTGCCAAAGCAGCATAAAGCAAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000528498.5
ENST00000528900.5
ENST00000530301.5
ENST00000530749.5
ENST00000645312.1
ENST00000647231.1