Pregenerated sensors for RDH14 (Homo sapiens)
Ensembl gene IDs: ENSG00000240857Ensembl transcript IDs: ENST00000381249.4, ENST00000468071.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TTCCAAGTAAGACTTGTGTGCACACACCAGGCAGATAATTTCCACACAAACACCCAGTCTTCCCGTGCATaGGGCCGGGGTCCCCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQVRLVCTHQADNFHTNTQSSRA*GRGPRL Trigger: GAGGCGGGGACCCCGGCCTCATGCACGGGAAGACTG...GGTGTTTGTGTGGAAATTATCTGCCTGGTGTGTGCACACAAGTCTTACTTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR GCA 90 bp | TTCCAAGTAAGACTTGTGTGCACACACCAGGCAGATAATTTCCACACAAACACCCGCCGCAGTGGCCACTaGCATCGTCAGGCCCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FQVRLVCTHQADNFHTNTRRSGH*HRQARG Trigger: CCCTCGGGCCTGACGATGGCAGTGGCCACTGCGGCG...GGTGTTTGTGTGGAAATTATCTGCCTGGTGTGTGCACACAAGTCTTACTTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR GCA 90 bp | TTCCAAGTAAGACTTGTGTGCACACACCAGGCAGATAATTTCCACACAAACACCCAGAGCGGCCAGTACTaGCGCCGCAGTGGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FQVRLVCTHQADNFHTNTQSGQY*RRSGHC Trigger: GCAGTGGCCACTGCGGCGGCAGTACTGGCCGCTCTG...GGTGTTTGTGTGGAAATTATCTGCCTGGTGTGTGCACACAAGTCTTACTTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR TCA 90 bp | CCAGTAAATTTATTCCAAGTAAGACTTGTGTGCACACACCAGGCAGATAATTTCGGTCCCGGCAGCCCATaGTCACCCGCGCTCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PVNLFQVRLVCTHQADNFGPGSP*SPALPG Trigger: GCCTGGGAGCGCGGGTGATCATGGGCTGCCGGGACC...GAAATTATCTGCCTGGTGTGTGCACACAAGTCTTACTTGGAATAAATTTACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR CCA 90 bp | CCAAAATACCCACATGTACCTCTTAGCAGGCTATTCCAATATCAAAATTCTTTTGCTGACGCCAGGCTCTaGGCCGCACTCCGCGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PKYPHVPLSRLFQYQNSFADARL*AALRGL Trigger: CAGGCCGCGGAGTGCGGCCCAGAGCCTGGCGTCAGC...AAAAGAATTTTGATATTGGAATAGCCTGCTAAGAGGTACATGTGGGTATTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR GCA 90 bp | CCAGTAAATTTATTCCAAGTAAGACTTGTGTGCACACACCAGGCAGATAATTTCAGCACAGTCTTCCCGTaGATGAGGCCGGGGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: PVNLFQVRLVCTHQADNFSTVFP*MRPGSP Trigger: CGGGGACCCCGGCCTCATGCACGGGAAGACTGTGCT...GAAATTATCTGCCTGGTGTGTGCACACAAGTCTTACTTGGAATAAATTTACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR CCA 90 bp | CAAAATTCTTTTTCTTCAAGTAACAAGTTCTCAATCCACACCATTCCTGATCACCCTCTGCGCAGCCGCTaGACCCTGGGCCCCACGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QNSFSSSNKFSIHTIPDHPLRSR*TLGPTN Trigger: GTTCGTGGGGCCCAGGGTCCAGCGGCTGCGCAGAGG...GTGATCAGGAATGGTGTGGATTGAGAACTTGTTACTTGAAGAAAAAGAATTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR TCA 90 bp | CCAGTAAATTTATTCCAAGTAAGACTTGTGTGCACACACCAGGCAGATAATTTCCGCTGTTCGCCCCGGTaGTCAGCACAGTCTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PVNLFQVRLVCTHQADNFRCSPR*SAQSSR Trigger: ACGGGAAGACTGTGCTGATCACCGGGGCGAACAGCG...GAAATTATCTGCCTGGTGTGTGCACACAAGTCTTACTTGGAATAAATTTACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR CCA 90 bp | CAAAATTCTTTTTCTTCAAGTAACAAGTTCTCAATCCACACCATTCCTGATCACGTACTGCCGCCGCAGTaGCCACTGCCATCGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QNSFSSSNKFSIHTIPDHVLPPQ*PLPSSG Trigger: GCCTGACGATGGCAGTGGCCACTGCGGCGGCAGTAC...GTGATCAGGAATGGTGTGGATTGAGAACTTGTTACTTGAAGAAAAAGAATTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR TCA 90 bp | TTCCAAGTAAGACTTGTGTGCACACACCAGGCAGATAATTTCCACACAAACACCTCCTTCTACCTCAGGTaGAGAGGCCAAATAAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: FQVRLVCTHQADNFHTNTSFYLR*RGQING Trigger: TCCATTTATTTGGCCTCTTCACCTGAGGTAGAAGGA...GGTGTTTGTGTGGAAATTATCTGCCTGGTGTGTGCACACAAGTCTTACTTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR CCA 90 bp | CCAAAATACCCACATGTACCTCTTAGCAGGCTATTCCAATATCAAAATTCTTTTAGCCTAGGCTCTTCCTaGAGCATTTCCTGGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PKYPHVPLSRLFQYQNSFSLGSS*SISWQK Trigger: CTTCTGCCAGGAAATGCTCCAGGAAGAGCCTAGGCT...AAAAGAATTTTGATATTGGAATAGCCTGCTAAGAGGTACATGTGGGTATTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR TCA 90 bp | CCAAAATACCCACATGTACCTCTTAGCAGGCTATTCCAATATCAAAATTCTTTTAATCCTGCTGGGAGCTaGACTTTTGAGGAGTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PKYPHVPLSRLFQYQNSFNPAGS*TFEESK Trigger: CTTGGACTCCTCAAAAGTTCAGCTCCCAGCAGGATT...AAAAGAATTTTGATATTGGAATAGCCTGCTAAGAGGTACATGTGGGTATTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR TCA 90 bp | TCTTTTTCTTCAAGTAACAAGTTCTCAATCCACACCATTCCTGATCACAGATATCCCAAAGTATCTTCCTaGCACTCCTTCTACCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFSSSNKFSIHTIPDHRYPKVSS*HSFYLR Trigger: CCTGAGGTAGAAGGAGTGTCAGGAAGATACTTTGGG...ATATCTGTGATCAGGAATGGTGTGGATTGAGAACTTGTTACTTGAAGAAAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR GCA 90 bp | CCAGTAAATTTATTCCAAGTAAGACTTGTGTGCACACACCAGGCAGATAATTTCTGGTTCACTCCGAACTaGATCTCAAACCCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PVNLFQVRLVCTHQADNFWFTPN*ISNPSS Trigger: TGAAGATGGGTTTGAGATGCAGTTCGGAGTGAACCA...GAAATTATCTGCCTGGTGTGTGCACACAAGTCTTACTTGGAATAAATTTACTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR GCA 90 bp | CAAAATTCTTTTTCTTCAAGTAACAAGTTCTCAATCCACACCATTCCTGATCACTTGGTGAGTAGAAAGTaGCCCAGATGGTTCACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QNSFSSSNKFSIHTIPDHLVSRK*PRWFTP Trigger: CGGAGTGAACCATCTGGGGCACTTTCTACTCACCAA...GTGATCAGGAATGGTGTGGATTGAGAACTTGTTACTTGAAGAAAAAGAATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR CCA 90 bp | CCAAAATACCCACATGTACCTCTTAGCAGGCTATTCCAATATCAAAATTCTTTTAGAAAGTGCCCCAGATaGTTCACTCCGAACTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PKYPHVPLSRLFQYQNSFRKCPR*FTPNCI Trigger: GATGCAGTTCGGAGTGAACCATCTGGGGCACTTTCT...AAAAGAATTTTGATATTGGAATAGCCTGCTAAGAGGTACATGTGGGTATTTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR TCA 90 bp | CAAAATTCTTTTTCTTCAAGTAACAAGTTCTCAATCCACACCATTCCTGATCACCAAGGAGAAGATTGGTaGGTAGAAAGTGCCCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QNSFSSSNKFSIHTIPDHQGEDW*VESAPD Trigger: ATCTGGGGCACTTTCTACTCACCAATCTTCTCCTTG...GTGATCAGGAATGGTGTGGATTGAGAACTTGTTACTTGAAGAAAAAGAATTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR CCA 90 bp | TCTTTTTCTTCAAGTAACAAGTTCTCAATCCACACCATTCCTGATCACAGATATTGGTTTGACCAACAGTaGAATGTGTATGTGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SFSSSNKFSIHTIPDHRYWFDQQ*NVYVPP Trigger: GGGAGGCACATACACATTCCACTGTTGGTCAAACCA...ATATCTGTGATCAGGAATGGTGTGGATTGAGAACTTGTTACTTGAAGAAAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR GCA 90 bp | TCTTTTTCTTCAAGTAACAAGTTCTCAATCCACACCATTCCTGATCACAGATATGCACTGGAAGATCCCTaGGTTATTGATCAAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: SFSSSNKFSIHTIPDHRYALEDP*VIDQDI Trigger: GATGTCTTGATCAATAACGCAGGGATCTTCCAGTGC...ATATCTGTGATCAGGAATGGTGTGGATTGAGAACTTGTTACTTGAAGAAAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR GCA 90 bp | CCAAAATACCCACATGTACCTCTTAGCAGGCTATTCCAATATCAAAATTCTTTTCGTACAATACCAGGATaGAACACATTGACGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PKYPHVPLSRLFQYQNSFRTIPG*NTLTVT Trigger: TGTCACCGTCAATGTGTTGCATCCTGGTATTGTACG...AAAAGAATTTTGATATTGGAATAGCCTGCTAAGAGGTACATGTGGGTATTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR TCA 90 bp | CCAAAATACCCACATGTACCTCTTAGCAGGCTATTCCAATATCAAAATTCTTTTCTTCTACTGGAGTTTTaGAAAAAGCCCATGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: PKYPHVPLSRLFQYQNSFLLLEF*KKPMTP Trigger: TGGTGTCATGGGCTTTTTTCAAAACTCCAGTAGAAG...AAAAGAATTTTGATATTGGAATAGCCTGCTAAGAGGTACATGTGGGTATTTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR TCA 90 bp | TCTTTTTCTTCAAGTAACAAGTTCTCAATCCACACCATTCCTGATCACAGATATCAACCATCACTTCACTaGTATCCCAGAGTTTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFSSSNKFSIHTIPDHRYQPSLH*YPRVFL Trigger: CAAGAAAACTCTGGGATATCAGTGAAGTGATGGTTG...ATATCTGTGATCAGGAATGGTGTGGATTGAGAACTTGTTACTTGAAGAAAAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR GCA 90 bp | CCAAAATACCCACATGTACCTCTTAGCAGGCTATTCCAATATCAAAATTCTTTTCAAGTAAGACTTGTGTaGACACACCAGGCAGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: PKYPHVPLSRLFQYQNSFQVRLV*THQADN Trigger: ATTATCTGCCTGGTGTGTGCACACAAGTCTTACTTG...AAAAGAATTTTGATATTGGAATAGCCTGCTAAGAGGTACATGTGGGTATTTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR CCA 90 bp | CAAAATTCTTTTTCTTCAAGTAACAAGTTCTCAATCCACACCATTCCTGATCACAAGAGGCCAAATAAATaGAAGTCTGGGCACCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QNSFSSSNKFSIHTIPDHKRPNK*KSGHLL Trigger: TAGAAGGTGCCCAGACTTCCATTTATTTGGCCTCTT...GTGATCAGGAATGGTGTGGATTGAGAACTTGTTACTTGAAGAAAAAGAATTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR CCA 90 bp | CAAAATTCTTTTTCTTCAAGTAACAAGTTCTCAATCCACACCATTCCTGATCACCACCAAATTGAAGAGTaGTTTGACCAACAGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QNSFSSSNKFSIHTIPDHHQIEE*FDQQWN Trigger: ATTCCACTGTTGGTCAAACCACTCTTCAATTTGGTG...GTGATCAGGAATGGTGTGGATTGAGAACTTGTTACTTGAAGAAAAAGAATTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS TCA 90 bp | GCTGACCCGCCGCCTCCTCGGCGCGCGCGCGGTCCCGGCAGCCCATaGTCACCCGCGCTCCCAGGCGCAGTAGCTCGGCGGCCGTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: ADPPPPRRARGPGSP*SPALPGAVARRPWR Trigger: GCGCCACGGCCGCCGAGCTACTGCGCCTGGGAGCGCGGGTGATCATGGGCTGCCGGGACCGCGCGCGCGCCGAGGAGGCGGCGGGTCAGC 80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS GCA 90 bp | CCGGCGGGCCGCCAGCCACAGCGCCCCGCCCAGAGCGGCCAGTACTaGCGCCGCAGTGGCCACTGCCATCGTCAGGCCCGAGGGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: PAGRQPQRPAQSGQY*RRSGHCHRQARGPT Trigger: GGTGGGCCCTCGGGCCTGACGATGGCAGTGGCCACTGCGGCGGCAGTACTGGCCGCTCTGGGCGGGGCGCTGTGGCTGGCGGCCCGCCGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS GCA 90 bp | CAGCGCCCCGCCCAGAGCGGCCAGTACTGCCGCCGCAGTGGCCACTaGCATCGTCAGGCCCGAGGGCCCACCGGCCCCTCCACGGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QRPAQSGQYCRRSGH*HRQARGPTGPSTGV Trigger: AACTCCCGTGGAGGGGCCGGTGGGCCCTCGGGCCTGACGATGGCAGTGGCCACTGCGGCGGCAGTACTGGCCGCTCTGGGCGGGGCGCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS CCA 90 bp | CAGCTCCCGGACTATGAGCTCGCCCACCCCGCTGACGCCAGGCTCTaGGCCGCACTCCGCGGCCTGGCGGAGCTCGCGGCGGAGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: QLPDYELAHPADARL*AALRGLAELAAELT Trigger: GGTCAGCTCCGCCGCGAGCTCCGCCAGGCCGCGGAGTGCGGCCCAGAGCCTGGCGTCAGCGGGGTGGGCGAGCTCATAGTCCGGGAGCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS GCA 90 bp | GGAATGTGTATGTGCCTCCCCAGATTTGTCCGTACAATACCAGGATaGAACACATTGACGGTGACATTTGTGCCTTCTAAGCGGCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GMCMCLPRFVRTIPG*NTLTVTFVPSKRRA Trigger: AGCCCGCCGCTTAGAAGGCACAAATGTCACCGTCAATGTGTTGCATCCTGGTATTGTACGGACAAATCTGGGGAGGCACATACACATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381249.4 ENST00000468071.1 |
||
| CDS GCA 90 bp | CTCAAACCCATCTTCAGTCTTCATGTAAGGGCACTGGAAGATCCCTaGGTTATTGATCAAGACATCCAGCCTAGGCTCTTCCGGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: LKPIFSLHVRALEDP*VIDQDIQPRLFRNP Trigger: TGGGTTCCGGAAGAGCCTAGGCTGGATGTCTTGATCAATAACGCAGGGATCTTCCAGTGCCCTTACATGAAGACTGAAGATGGGTTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468071.1 |
||
| CDS GCA 90 bp | CTCAAACCCATCTTCAGTCTTCATGTAAGGGCACTGGAAGATCCCTaGGTTATTGATCAAGACATCCAGCCTAGGCTCTTCCTGGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LKPIFSLHVRALEDP*VIDQDIQPRLFLEH Trigger: ATGCTCCAGGAAGAGCCTAGGCTGGATGTCTTGATCAATAACGCAGGGATCTTCCAGTGCCCTTACATGAAGACTGAAGATGGGTTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR CAA 90 bp | TTCCAAGTAAGACTTGTGTGCACACACCAGGCAGATAATTTCCACACAAACACCCCAGGATGCAACACATaGACGGTGACATTTGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FQVRLVCTHQADNFHTNTPGCNT*TVTFVP Trigger: AGGCACAAATGTCACCGTCAATGTGTTGCATCCTGG...GGTGTTTGTGTGGAAATTATCTGCCTGGTGTGTGCACACAAGTCTTACTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS GCA 90 bp | GACACCAAATTGAAGAGTGGTTTGACCAACAGTGGAATGTGTATGTaGCTCCCCAGATTTGTCCGTACAATACCAGGATGCAACACATTG | + |
|
Preference number: 5 (lower is better) Translates to: DTKLKSGLTNSGMCM*LPRFVRTIPGCNTL Trigger: CAATGTGTTGCATCCTGGTATTGTACGGACAAATCTGGGGAGGCACATACACATTCCACTGTTGGTCAAACCACTCTTCAATTTGGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381249.4 ENST00000468071.1 |
||
| CDS-3UTR CAA 90 bp | CCAGTAAATTTATTCCAAGTAAGACTTGTGTGCACACACCAGGCAGATAATTTCGCCCATGACACCAAATaGAAGAGTGGTTTGACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PVNLFQVRLVCTHQADNFAHDTK*KSGLTN Trigger: GTTGGTCAAACCACTCTTCAATTTGGTGTCATGGGC...GAAATTATCTGCCTGGTGTGTGCACACAAGTCTTACTTGGAATAAATTTACTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR CAA 90 bp | TCTTTTTCTTCAAGTAACAAGTTCTCAATCCACACCATTCCTGATCACAGATATAGTCCAAGGAGAAGATaGGTGAGTAGAAAGTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SFSSSNKFSIHTIPDHRYSPRRR*VSRKCP Trigger: GGGGCACTTTCTACTCACCAATCTTCTCCTTGGACT...ATATCTGTGATCAGGAATGGTGTGGATTGAGAACTTGTTACTTGAAGAAAAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR CAA 90 bp | CAAAATTCTTTTTCTTCAAGTAACAAGTTCTCAATCCACACCATTCCTGATCACCTGGGAGCTGAACTTTaGAGGAGTCCAAGGAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QNSFSSSNKFSIHTIPDHLGAEL*RSPRRR Trigger: TCTTCTCCTTGGACTCCTCAAAAGTTCAGCTCCCAG...GTGATCAGGAATGGTGTGGATTGAGAACTTGTTACTTGAAGAAAAAGAATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR CAA 90 bp | CAAAATTCTTTTTCTTCAAGTAACAAGTTCTCAATCCACACCATTCCTGATCACTGTGCCTCCCCAGATTaGTCCGTACAATACCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QNSFSSSNKFSIHTIPDHCASPD*SVQYQD Trigger: ATCCTGGTATTGTACGGACAAATCTGGGGAGGCACA...GTGATCAGGAATGGTGTGGATTGAGAACTTGTTACTTGAAGAAAAAGAATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR CAA 90 bp | CAAAATTCTTTTTCTTCAAGTAACAAGTTCTCAATCCACACCATTCCTGATCACGATTCATCCATAGCTTaGGGCAACAGTTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QNSFSSSNKFSIHTIPDHDSSIA*GNSSSS Trigger: AGAGGAAGAACTGTTGCCCAAAGCTATGGATGAATC...GTGATCAGGAATGGTGTGGATTGAGAACTTGTTACTTGAAGAAAAAGAATTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS-3UTR CAA 90 bp | CCAAAATACCCACATGTACCTCTTAGCAGGCTATTCCAATATCAAAATTCTTTTAAATTGAAGAGTGGTTaGACCAACAGTGGAATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PKYPHVPLSRLFQYQNSFKLKSG*TNSGMC Trigger: ACACATTCCACTGTTGGTCAAACCACTCTTCAATTT...AAAAGAATTTTGATATTGGAATAGCCTGCTAAGAGGTACATGTGGGTATTTTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS TCA 72 bp | CCGCCTCCTCGGCGCGCGCGCGGTCCCGGCAGCCCATaGTCACCCGCGCTCCCAGGCGCAGTAGCTCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: PPPRRARGPGSP*SPALPGAVARR Trigger: CCGCCGAGCTACTGCGCCTGGGAGCGCGGGTGATCATGGGCTGCCGGGACCGCGCGCGCGCCGAGGAGGCGG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS GCA 72 bp | GCCCAGAGCGGCCAGTACTGCCGCCGCAGTGGCCACTaGCATCGTCAGGCCCGAGGGCCCACCGGCCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: AQSGQYCRRSGH*HRQARGPTGPS Trigger: GGAGGGGCCGGTGGGCCCTCGGGCCTGACGATGGCAGTGGCCACTGCGGCGGCAGTACTGGCCGCTCTGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS CCA 72 bp | GACTATGAGCTCGCCCACCCCGCTGACGCCAGGCTCTaGGCCGCACTCCGCGGCCTGGCGGAGCTCGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: DYELAHPADARL*AALRGLAELAA Trigger: CGCCGCGAGCTCCGCCAGGCCGCGGAGTGCGGCCCAGAGCCTGGCGTCAGCGGGGTGGGCGAGCTCATAGTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS GCA 72 bp | CGCCAGCCACAGCGCCCCGCCCAGAGCGGCCAGTACTaGCGCCGCAGTGGCCACTGCCATCGTCAGGCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: RQPQRPAQSGQY*RRSGHCHRQAR Trigger: TCGGGCCTGACGATGGCAGTGGCCACTGCGGCGGCAGTACTGGCCGCTCTGGGCGGGGCGCTGTGGCTGGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381249.4 |
||
| CDS CAA 90 bp | ATGTGCCTCCCCAGATTTGTCCGTACAATACCAGGATGCAACACATaGACGGTGACATTTGTGCCTTCTAAGCGGCGGGCTAGTTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: MCLPRFVRTIPGCNT*TVTFVPSKRRASSL Trigger: CAGGGAACTAGCCCGCCGCTTAGAAGGCACAAATGTCACCGTCAATGTGTTGCATCCTGGTATTGTACGGACAAATCTGGGGAGGCACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381249.4 ENST00000468071.1 |
||
| CDS CAA 72 bp | CTGGGAGCTGAACTTTTGAGGAGTCCAAGGAGAAGATaGGTGAGTAGAAAGTGCCCCAGATGGTTCACTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LGAELLRSPRRR*VSRKCPRWFTP Trigger: CGGAGTGAACCATCTGGGGCACTTTCTACTCACCAATCTTCTCCTTGGACTCCTCAAAAGTTCAGCTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381249.4 ENST00000468071.1 |
||
| CDS CAA 72 bp | CCCAGATTTGTCCGTACAATACCAGGATGCAACACATaGACGGTGACATTTGTGCCTTCTAAGCGGCGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PRFVRTIPGCNT*TVTFVPSKRRA Trigger: AGCCCGCCGCTTAGAAGGCACAAATGTCACCGTCAATGTGTTGCATCCTGGTATTGTACGGACAAATCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381249.4 ENST00000468071.1 |
||
| CDS CAA 90 bp | ACAATCCTGCTGGGAGCTGAACTTTTGAGGAGTCCAAGGAGAAGATaGGTGAGTAGAAAGTGCCCCAGATGGTTCACTCCGAACTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: TILLGAELLRSPRRR*VSRKCPRWFTPNCI Trigger: GATGCAGTTCGGAGTGAACCATCTGGGGCACTTTCTACTCACCAATCTTCTCCTTGGACTCCTCAAAAGTTCAGCTCCCAGCAGGATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381249.4 ENST00000468071.1 |
||
| CDS GCA 72 bp | TTGAGGAGTCCAAGGAGAAGATTGGTGAGTAGAAAGTaGCCCAGATGGTTCACTCCGAACTGCATCTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LRSPRRRLVSRK*PRWFTPNCISN Trigger: GTTTGAGATGCAGTTCGGAGTGAACCATCTGGGGCACTTTCTACTCACCAATCTTCTCCTTGGACTCCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381249.4 ENST00000468071.1 |
||
| CDS CCA 72 bp | CCAAGGAGAAGATTGGTGAGTAGAAAGTGCCCCAGATaGTTCACTCCGAACTGCATCTCAAACCCATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PRRRLVSRKCPR*FTPNCISNPSS Trigger: TGAAGATGGGTTTGAGATGCAGTTCGGAGTGAACCATCTGGGGCACTTTCTACTCACCAATCTTCTCCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381249.4 ENST00000468071.1 |
||
| CDS GCA 72 bp | ATCTTCAGTCTTCATGTAAGGGCACTGGAAGATCCCTaGGTTATTGATCAAGACATCCAGCCTAGGCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IFSLHVRALEDP*VIDQDIQPRLF Trigger: GAAGAGCCTAGGCTGGATGTCTTGATCAATAACGCAGGGATCTTCCAGTGCCCTTACATGAAGACTGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381249.4 ENST00000468071.1 |
||
| CDS GCA 72 bp | ATGTGCCTCCCCAGATTTGTCCGTACAATACCAGGATaGAACACATTGACGGTGACATTTGTGCCTTCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: MCLPRFVRTIPG*NTLTVTFVPSK Trigger: CTTAGAAGGCACAAATGTCACCGTCAATGTGTTGCATCCTGGTATTGTACGGACAAATCTGGGGAGGCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381249.4 ENST00000468071.1 |
||
| CDS TCA 72 bp | AAGTTTGGAAGAAACTACCACAATCCTGCTGGGAGCTaGACTTTTGAGGAGTCCAAGGAGAAGATTGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: KFGRNYHNPAGS*TFEESKEKIGE Trigger: CTCACCAATCTTCTCCTTGGACTCCTCAAAAGTTCAGCTCCCAGCAGGATTGTGGTAGTTTCTTCCAAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381249.4 ENST00000468071.1 |
||
| CDS CAA 72 bp | GAAGAAACTACCACAATCCTGCTGGGAGCTGAACTTTaGAGGAGTCCAAGGAGAAGATTGGTGAGTAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: EETTTILLGAEL*RSPRRRLVSRK Trigger: CTTTCTACTCACCAATCTTCTCCTTGGACTCCTCAAAAGTTCAGCTCCCAGCAGGATTGTGGTAGTTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381249.4 ENST00000468071.1 |
||
| CDS CAA 72 bp | TCCCAGAGTTTTCTTGCAACAGATTCATCCATAGCTTaGGGCAACAGTTCTTCCTCTTTACAATCCCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SQSFLATDSSIA*GNSSSSLQSPK Trigger: CTTTGGGGATTGTAAAGAGGAAGAACTGTTGCCCAAAGCTATGGATGAATCTGTTGCAAGAAAACTCTGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381249.4 ENST00000468071.1 |
||