Pregenerated sensors for RD3L (Homo sapiens)
Ensembl gene IDs: ENSG00000227729Ensembl transcript IDs: ENST00000557640.2, ENST00000648118.1
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TGTACAGAATTTGTCAGACTTCATACTAAAGTTGCTTTAGTTCCTGTGAGGTGGACATCCACAGGATACTaGCCTTGTAACAAAGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: CTEFVRLHTKVALVPVRWTSTGY*PCNKEK Trigger: TTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGT...CCACCTCACAGGAACTAAAGCAACTTTAGTATGAAGTCTGACAAATTCTGTACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR TCA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCAGCAGTCCATGCTCCCTaGGTCCTCCAGGTCCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSAVHAP*VLQVLL Trigger: CAAGAGGACCTGGAGGACTCAGGGAGCATGGACTGC...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR GCA 90 bp | TGTACAGAATTTGTCAGACTTCATACTAAAGTTGCTTTAGTTCCTGTGAGGTGGGAGCAGAGCAGTCCATaGTCCCTGAGTCCTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: CTEFVRLHTKVALVPVRWEQSSP*SLSPPG Trigger: ACCTGGAGGACTCAGGGAGCATGGACTGCTCTGCTC...CCACCTCACAGGAACTAAAGCAACTTTAGTATGAAGTCTGACAAATTCTGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR GCA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCATCCTCCAGGTCCTCTTaGTCACTCCCTCTGTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSSSRSS*SLPLSE Trigger: CTCTGACAGAGGGAGTGAGCAAGAGGACCTGGAGGA...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR GCA 90 bp | TGTACAGAATTTGTCAGACTTCATACTAAAGTTGCTTTAGTTCCTGTGAGGTGGCACTGGGACGTATCTTaGTCTCCTAGGTGTGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: CTEFVRLHTKVALVPVRWHWDVS*SPRCVL Trigger: GAGGACACACCTAGGAGAGCAAGATACGTCCCAGTG...CCACCTCACAGGAACTAAAGCAACTTTAGTATGAAGTCTGACAAATTCTGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR TCA 90 bp | TGTACAGAATTTGTCAGACTTCATACTAAAGTTGCTTTAGTTCCTGTGAGGTGGCTTTGTCACTATGTCTaGGCCAGGATAGTGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: CTEFVRLHTKVALVPVRWLCHYV*ARIVCG Trigger: CCCACACACTATCCTGGCTCAGACATAGTGACAAAG...CCACCTCACAGGAACTAAAGCAACTTTAGTATGAAGTCTGACAAATTCTGTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR CCA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCATTGGAGCTGTCACCTTaGATCACAGAAGGAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSLELSP*ITEGAE Trigger: CTCTGCTCCTTCTGTGATCCAAGGTGACAGCTCCAA...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR TCA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCAGTTGATGGGCTGATGTaGTGTTGCCAAAGAGTTGAC | + |
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Preference number: 4 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSVDGLM*CCQRVD Trigger: GTCAACTCTTTGGCAACATCACATCAGCCCATCAAC...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR TCA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCAGTTCCATATTCTGTGTaGGAACACTGGGAACCTGTC | + |
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Preference number: 4 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSVPYSV*EHWEPV Trigger: GACAGGTTCCCAGTGTTCTCACACAGAATATGGAAC...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR CCA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCAGAAGCTGTGTTTCACTaGGACGTATCTTGCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSEAVFH*DVSCSP Trigger: AGGAGAGCAAGATACGTCCCAGTGAAACACAGCTTC...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR TCA 90 bp | TGTACAGAATTTGTCAGACTTCATACTAAAGTTGCTTTAGTTCCTGTGAGGTGGATGTTGCCAAAGAGTTaGCTGAAGTTGGTGACGAAG | + |
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Preference number: 4 (lower is better) Translates to: CTEFVRLHTKVALVPVRWMLPKS*LKLVTK Trigger: CTTCGTCACCAACTTCAGTCAACTCTTTGGCAACAT...CCACCTCACAGGAACTAAAGCAACTTTAGTATGAAGTCTGACAAATTCTGTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR TCA 90 bp | TGTACAGAATTTGTCAGACTTCATACTAAAGTTGCTTTAGTTCCTGTGAGGTGGGTTAAGTTGATGGGCTaGTGTGATGTTGCCAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: CTEFVRLHTKVALVPVRWVKLMG*CDVAKE Trigger: CTCTTTGGCAACATCACATCAGCCCATCAACTTAAC...CCACCTCACAGGAACTAAAGCAACTTTAGTATGAAGTCTGACAAATTCTGTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR TCA 90 bp | TGTACAGAATTTGTCAGACTTCATACTAAAGTTGCTTTAGTTCCTGTGAGGTGGGATTCTGGTAGTTTCTaGGCCAGTTGTAATCCACAC | + |
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Preference number: 4 (lower is better) Translates to: CTEFVRLHTKVALVPVRWDSGSF*ASCNPH Trigger: GTGTGGATTACAACTGGCTCAGAAACTACCAGAATC...CCACCTCACAGGAACTAAAGCAACTTTAGTATGAAGTCTGACAAATTCTGTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR TCA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCACCAGTTTGGCAAGGTTaGACTTGTGAGCAAAGAACT | + |
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Preference number: 4 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSPVWQG*TCEQRT Trigger: AGTTCTTTGCTCACAAGTTCAACCTTGCCAAACTGG...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR GCA 90 bp | TGTACAGAATTTGTCAGACTTCATACTAAAGTTGCTTTAGTTCCTGTGAGGTGGGATGCTGGTCCTAAATaGATTCCGACATGTCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: CTEFVRLHTKVALVPVRWDAGPK*IPTCLW Trigger: CCAAAGACATGTCGGAATGCATTTAGGACCAGCATC...CCACCTCACAGGAACTAAAGCAACTTTAGTATGAAGTCTGACAAATTCTGTACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR GCA 90 bp | TGTACAGAATTTGTCAGACTTCATACTAAAGTTGCTTTAGTTCCTGTGAGGTGGTCTCGCTCCTTTAGGTaGCATTTTAATTCCCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: CTEFVRLHTKVALVPVRWSRSFR*HFNSRS Trigger: GCTTCGGGAATTAAAATGGCACCTAAAGGAGCGAGA...CCACCTCACAGGAACTAAAGCAACTTTAGTATGAAGTCTGACAAATTCTGTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR GCA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCATCCCTCTGTCAGAGCTaGTTAGGAAGTCTTTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSSLCQS*LGSLSE Trigger: TTCTGAAAGACTTCCTAAGCAGCTCTGACAGAGGGA...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR TCA 90 bp | TGTACAGAATTTGTCAGACTTCATACTAAAGTTGCTTTAGTTCCTGTGAGGTGGTTAGGAATGAGGCTGTaGTGTCTTCATTTGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: CTEFVRLHTKVALVPVRWLGMRL*CLHLER Trigger: TCTCTCCAAATGAAGACATCACAGCCTCATTCCTAA...CCACCTCACAGGAACTAAAGCAACTTTAGTATGAAGTCTGACAAATTCTGTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR TCA 90 bp | TGTACAGAATTTGTCAGACTTCATACTAAAGTTGCTTTAGTTCCTGTGAGGTGGTTTAGCCTGTTAAGTTaGTGGGCTGATGTGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: CTEFVRLHTKVALVPVRWFSLLS*WADVML Trigger: CAACATCACATCAGCCCATCAACTTAACAGGCTAAA...CCACCTCACAGGAACTAAAGCAACTTTAGTATGAAGTCTGACAAATTCTGTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR TCA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCAGCAAGGTTGAACTTGTaGGCAAAGAACTTCAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSARLNL*AKNFKL Trigger: CAACTTGAAGTTCTTTGCTCACAAGTTCAACCTTGC...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR CCA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCATGTAGGAATCGTTTTTaGGCCATTTCATCCAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSCRNRF*AISSSQ Trigger: TTGGCTGGATGAAATGGCCCAAAAACGATTCCTACA...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR CCA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCAAGCCAGGATAGTGTGTaGGTTTGTAGGAATCGTTTT | + |
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Preference number: 4 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSSQDSV*VCRNRF Trigger: AAAACGATTCCTACAAACCCACACACTATCCTGGCT...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR CCA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCATCTTTGTTCAGTCACTaGGATAGTTGTGTGGGGATT | + |
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Preference number: 4 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSSLFSH*DSCVGI Trigger: AATCCCCACACAACTATCCCAGTGACTGAACAAAGA...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR CCA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCAGTAGACTATTTCCCATaGCAGTACATCATTTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSVDYFP*QYIIFC Trigger: GCAGAAAATGATGTACTGCCATGGGAAATAGTCTAC...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR CCA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCACGTAACTGGAAATGGTaGGTATTTCATCTTTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSRNWKW*VFHLCL Trigger: CAGACAAAGATGAAATACCCACCATTTCCAGTTACG...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR GCA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCAAGTTATATAATGGTCTaGCTTTTCAATGTAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSSYIMV*LFNVAQ Trigger: CTGAGCTACATTGAAAAGGCAGACCATTATATAACT...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR CCA 90 bp | TGTACAGAATTTGTCAGACTTCATACTAAAGTTGCTTTAGTTCCTGTGAGGTGGTTTTGTCTACGTAACTaGAAATGGTGGGTATTTCAT | + |
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Preference number: 4 (lower is better) Translates to: CTEFVRLHTKVALVPVRWFCLRN*KWWVFH Trigger: ATGAAATACCCACCATTTCCAGTTACGTAGACAAAA...CCACCTCACAGGAACTAAAGCAACTTTAGTATGAAGTCTGACAAATTCTGTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS GCA 90 bp | GAAGGAGCAGAGCAGTCCATGCTCCCTGAGTCCTCCAGGTCCTCTTaGTCACTCCCTCTGTCAGAGCTGCTTAGGAAGTCTTTCAGAACT | + |
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Preference number: 5 (lower is better) Translates to: EGAEQSMLPESSRSS*SLPLSELLRKSFRT Trigger: AGTTCTGAAAGACTTCCTAAGCAGCTCTGACAGAGGGAGTGAGCAAGAGGACCTGGAGGACTCAGGGAGCATGGACTGCTCTGCTCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557640.2 ENST00000648118.1 |
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| CDS CCA 90 bp | ATGGTGGGTATTTCATCTTTGTCTGCCCTCTTGGAGCTGTCACCTTaGATCACAGAAGGAGCAGAGCAGTCCATGCTCCCTGAGTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: MVGISSLSALLELSP*ITEGAEQSMLPESS Trigger: GGAGGACTCAGGGAGCATGGACTGCTCTGCTCCTTCTGTGATCCAAGGTGACAGCTCCAAGAGGGCAGACAAAGATGAAATACCCACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557640.2 ENST00000648118.1 |
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| CDS CCA 90 bp | CTACGTAACTGGAAATGGTGGGTATTTCATCTTTGTCTGCCCTCTTaGAGCTGTCACCTTGGATCACAGAAGGAGCAGAGCAGTCCATGC | + |
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Preference number: 5 (lower is better) Translates to: LRNWKWWVFHLCLPS*SCHLGSQKEQSSPC Trigger: GCATGGACTGCTCTGCTCCTTCTGTGATCCAAGGTGACAGCTCCAAGAGGGCAGACAAAGATGAAATACCCACCATTTCCAGTTACGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557640.2 ENST00000648118.1 |
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| CDS GCA 90 bp | TTGACTGAAGTTGGTGACGAAGCTGTGTTTCACTGGGACGTATCTTaGTCTCCTAGGTGTGTCCTCTGTAGAAGGAATGCGCCACCTTAT | + |
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Preference number: 5 (lower is better) Translates to: LTEVGDEAVFHWDVS*SPRCVLCRRNAPPY Trigger: ATAAGGTGGCGCATTCCTTCTACAGAGGACACACCTAGGAGAGCAAGATACGTCCCAGTGAAACACAGCTTCGTCACCAACTTCAGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557640.2 ENST00000648118.1 |
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| CDS CCA 90 bp | GTTGCCAAAGAGTTGACTGAAGTTGGTGACGAAGCTGTGTTTCACTaGGACGTATCTTGCTCTCCTAGGTGTGTCCTCTGTAGAAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: VAKELTEVGDEAVFH*DVSCSPRCVLCRRN Trigger: ATTCCTTCTACAGAGGACACACCTAGGAGAGCAAGATACGTCCCAGTGAAACACAGCTTCGTCACCAACTTCAGTCAACTCTTTGGCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557640.2 ENST00000648118.1 |
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| CDS CCA 90 bp | CCCGAAGCAGAGTCTTTGTCACTATGTCTGAGCCAGGATAGTGTGTaGGTTTGTAGGAATCGTTTTTGGGCCATTTCATCCAGCCAAAAA | + |
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Preference number: 5 (lower is better) Translates to: PEAESLSLCLSQDSV*VCRNRFWAISSSQK Trigger: TTTTTGGCTGGATGAAATGGCCCAAAAACGATTCCTACAAACCCACACACTATCCTGGCTCAGACATAGTGACAAAGACTCTGCTTCGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS CCA 90 bp | CTGGGAACCTGTCCTTTGTGTTTTTGTCTACGTAACTGGAAATGGTaGGTATTTCATCTTTGTCTGCCCTCTTGGAGCTGTCACCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: LGTCPLCFCLRNWKW*VFHLCLPSWSCHLG Trigger: TCCAAGGTGACAGCTCCAAGAGGGCAGACAAAGATGAAATACCCACCATTTCCAGTTACGTAGACAAAAACACAAAGGACAGGTTCCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557640.2 ENST00000648118.1 |
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| CDS-3UTR CAA 90 bp | TGTACAGAATTTGTCAGACTTCATACTAAAGTTGCTTTAGTTCCTGTGAGGTGGGTCCTCCAGGTCCTCTaGCTCACTCCCTCTGTCAGA | + |
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Preference number: 5 (lower is better) Translates to: CTEFVRLHTKVALVPVRWVLQVL*LTPSVR Trigger: TCTGACAGAGGGAGTGAGCAAGAGGACCTGGAGGAC...CCACCTCACAGGAACTAAAGCAACTTTAGTATGAAGTCTGACAAATTCTGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS CCA 90 bp | GTGAGAACACTGGGAACCTGTCCTTTGTGTTTTTGTCTACGTAACTaGAAATGGTGGGTATTTCATCTTTGTCTGCCCTCTTGGAGCTGT | + |
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Preference number: 5 (lower is better) Translates to: VRTLGTCPLCFCLRN*KWWVFHLCLPSWSC Trigger: ACAGCTCCAAGAGGGCAGACAAAGATGAAATACCCACCATTTCCAGTTACGTAGACAAAAACACAAAGGACAGGTTCCCAGTGTTCTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557640.2 ENST00000648118.1 |
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| CDS-3UTR CAA 90 bp | TGTACAGAATTTGTCAGACTTCATACTAAAGTTGCTTTAGTTCCTGTGAGGTGGCCCGAAGCAGAGTCTTaGTCACTATGTCTGAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: CTEFVRLHTKVALVPVRWPEAES*SLCLSQ Trigger: CTGGCTCAGACATAGTGACAAAGACTCTGCTTCGGG...CCACCTCACAGGAACTAAAGCAACTTTAGTATGAAGTCTGACAAATTCTGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR CAA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCATCTTTGTCTGCCCTCTaGGAGCTGTCACCTTGGATC | + |
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Preference number: 5 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSSLSAL*ELSPWI Trigger: GATCCAAGGTGACAGCTCCAAGAGGGCAGACAAAGA...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR CAA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCAGATGTTGCCAAAGAGTaGACTGAAGTTGGTGACGAA | + |
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Preference number: 5 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSDVAKE*TEVGDE Trigger: TTCGTCACCAACTTCAGTCAACTCTTTGGCAACATC...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR CAA 90 bp | TGTACAGAATTTGTCAGACTTCATACTAAAGTTGCTTTAGTTCCTGTGAGGTGGCTGGGAACCTGTCCTTaGTGTTTTTGTCTACGTAAC | + |
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Preference number: 5 (lower is better) Translates to: CTEFVRLHTKVALVPVRWLGTCP*CFCLRN Trigger: GTTACGTAGACAAAAACACAAAGGACAGGTTCCCAG...CCACCTCACAGGAACTAAAGCAACTTTAGTATGAAGTCTGACAAATTCTGTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR CAA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCACATTCCGACATGTCTTaGGTAGTGAAACGAAGAATG | + |
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Preference number: 5 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSHSDMS*VVKRRM Trigger: CATTCTTCGTTTCACTACCAAAGACATGTCGGAATG...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR CAA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCAGCAAAGAACTTCAAGTaGTCTTTGTTCAGTCACTGG | + |
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Preference number: 5 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSAKNFK*SLFSHW Trigger: CCAGTGACTGAACAAAGACAACTTGAAGTTCTTTGC...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR CAA 90 bp | CATAGGCTACATCCACAGGATACTGACCTTGTAACAAAGAAAAACTTGAAGTCATCCTGTGAGGTGGGTTaGAGGTATAAGAAAATACTG | + |
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Preference number: 5 (lower is better) Translates to: HRLHPQDTDLVTKKNLKSSCEVG*RYKKIL Trigger: CAGTATTTTCTTATACCTCAAACCCACCTCACAGGA...TGACTTCAAGTTTTTCTTTGTTACAAGGTCAGTATCCTGTGGATGTAGCCTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS TCA 90 bp | AAAACTTCTCGAAATCTGCTGAGAATAGTTCCAGTTTGGCAAGGTTaGACTTGTGAGCAAAGAACTTCAAGTTGTCTTTGTTCAGTCACT | + |
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Preference number: 5 (lower is better) Translates to: KTSRNLLRIVPVWQG*TCEQRTSSCLCSVT Trigger: AGTGACTGAACAAAGACAACTTGAAGTTCTTTGCTCACAAGTTCAACCTTGCCAAACTGGAACTATTCTCAGCAGATTTCGAGAAGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS GCA 90 bp | TGTTCATTTTCGATTTCTTGTATTAATCTCTCTCGCTCCTTTAGGTaGCATTTTAATTCCCGAAGCAGAGTCTTTGTCACTATGTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: CSFSISCINLSRSFR*HFNSRSRVFVTMSE Trigger: CTCAGACATAGTGACAAAGACTCTGCTTCGGGAATTAAAATGGCACCTAAAGGAGCGAGAGAGATTAATACAAGAAATCGAAAATGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR CAA 90 bp | TGTACAGAATTTGTCAGACTTCATACTAAAGTTGCTTTAGTTCCTGTGAGGTGGAACTTCAAGTTGTCTTaGTTCAGTCACTGGGATAGT | + |
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Preference number: 5 (lower is better) Translates to: CTEFVRLHTKVALVPVRWNFKLS*FSHWDS Trigger: ACTATCCCAGTGACTGAACAAAGACAACTTGAAGTT...CCACCTCACAGGAACTAAAGCAACTTTAGTATGAAGTCTGACAAATTCTGTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS-3UTR CAA 90 bp | TGTACAGAATTTGTCAGACTTCATACTAAAGTTGCTTTAGTTCCTGTGAGGTGGGAAGTCTTTCAGAACTaGCTTGAAGATGTAGACTAT | + |
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Preference number: 5 (lower is better) Translates to: CTEFVRLHTKVALVPVRWEVFQN*LEDVDY Trigger: ATAGTCTACATCTTCAAGCAAGTTCTGAAAGACTTC...CCACCTCACAGGAACTAAAGCAACTTTAGTATGAAGTCTGACAAATTCTGTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS GCA 72 bp | GAGCAGTCCATGCTCCCTGAGTCCTCCAGGTCCTCTTaGTCACTCCCTCTGTCAGAGCTGCTTAGGAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: EQSMLPESSRSS*SLPLSELLRKS Trigger: AGACTTCCTAAGCAGCTCTGACAGAGGGAGTGAGCAAGAGGACCTGGAGGACTCAGGGAGCATGGACTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557640.2 ENST00000648118.1 |
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| CDS GCA 72 bp | GTTGGTGACGAAGCTGTGTTTCACTGGGACGTATCTTaGTCTCCTAGGTGTGTCCTCTGTAGAAGGAATGCG | + |
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Preference number: 6 (lower is better) Translates to: VGDEAVFHWDVS*SPRCVLCRRNA Trigger: CGCATTCCTTCTACAGAGGACACACCTAGGAGAGCAAGATACGTCCCAGTGAAACACAGCTTCGTCACCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557640.2 ENST00000648118.1 |
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| CDS CCA 72 bp | ATTTCATCTTTGTCTGCCCTCTTGGAGCTGTCACCTTaGATCACAGAAGGAGCAGAGCAGTCCATGCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: ISSLSALLELSP*ITEGAEQSMLP Trigger: AGGGAGCATGGACTGCTCTGCTCCTTCTGTGATCCAAGGTGACAGCTCCAAGAGGGCAGACAAAGATGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557640.2 ENST00000648118.1 |
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| CDS CCA 72 bp | GAGTTGACTGAAGTTGGTGACGAAGCTGTGTTTCACTaGGACGTATCTTGCTCTCCTAGGTGTGTCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: ELTEVGDEAVFH*DVSCSPRCVLC Trigger: ACAGAGGACACACCTAGGAGAGCAAGATACGTCCCAGTGAAACACAGCTTCGTCACCAACTTCAGTCAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557640.2 ENST00000648118.1 |
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| CDS CCA 72 bp | TGGAAATGGTGGGTATTTCATCTTTGTCTGCCCTCTTaGAGCTGTCACCTTGGATCACAGAAGGAGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: WKWWVFHLCLPS*SCHLGSQKEQS Trigger: GCTCTGCTCCTTCTGTGATCCAAGGTGACAGCTCCAAGAGGGCAGACAAAGATGAAATACCCACCATTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557640.2 ENST00000648118.1 |
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| CDS CAA 72 bp | CTGGAAATGGTGGGTATTTCATCTTTGTCTGCCCTCTaGGAGCTGTCACCTTGGATCACAGAAGGAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LEMVGISSLSAL*ELSPWITEGAE Trigger: CTCTGCTCCTTCTGTGATCCAAGGTGACAGCTCCAAGAGGGCAGACAAAGATGAAATACCCACCATTTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000557640.2 ENST00000648118.1 |
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| CDS CAA 90 bp | TCTCTCGCTCCTTTAGGTGCCATTTTAATTCCCGAAGCAGAGTCTTaGTCACTATGTCTGAGCCAGGATAGTGTGTGGGTTTGTAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: SLAPLGAILIPEAES*SLCLSQDSVWVCRN Trigger: ATTCCTACAAACCCACACACTATCCTGGCTCAGACATAGTGACAAAGACTCTGCTTCGGGAATTAAAATGGCACCTAAAGGAGCGAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS CCA 72 bp | GAGTCTTTGTCACTATGTCTGAGCCAGGATAGTGTGTaGGTTTGTAGGAATCGTTTTTGGGCCATTTCATCC | + |
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Preference number: 6 (lower is better) Translates to: ESLSLCLSQDSV*VCRNRFWAISS Trigger: GGATGAAATGGCCCAAAAACGATTCCTACAAACCCACACACTATCCTGGCTCAGACATAGTGACAAAGACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS CAA 72 bp | CCTTTAGGTGCCATTTTAATTCCCGAAGCAGAGTCTTaGTCACTATGTCTGAGCCAGGATAGTGTGTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: PLGAILIPEAES*SLCLSQDSVWV Trigger: AACCCACACACTATCCTGGCTCAGACATAGTGACAAAGACTCTGCTTCGGGAATTAAAATGGCACCTAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS CCA 72 bp | CTGGGAACCTGTCCTTTGTGTTTTTGTCTACGTAACTaGAAATGGTGGGTATTTCATCTTTGTCTGCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LGTCPLCFCLRN*KWWVFHLCLPS Trigger: AGAGGGCAGACAAAGATGAAATACCCACCATTTCCAGTTACGTAGACAAAAACACAAAGGACAGGTTCCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557640.2 ENST00000648118.1 |
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| CDS CCA 72 bp | TGTCCTTTGTGTTTTTGTCTACGTAACTGGAAATGGTaGGTATTTCATCTTTGTCTGCCCTCTTGGAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: CPLCFCLRNWKW*VFHLCLPSWSC Trigger: ACAGCTCCAAGAGGGCAGACAAAGATGAAATACCCACCATTTCCAGTTACGTAGACAAAAACACAAAGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557640.2 ENST00000648118.1 |
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| CDS TCA 72 bp | GCTGAGAATAGTTCCAGTTTGGCAAGGTTGAACTTGTaGGCAAAGAACTTCAAGTTGTCTTTGTTCAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: AENSSSLARLNL*AKNFKLSLFSH Trigger: GTGACTGAACAAAGACAACTTGAAGTTCTTTGCTCACAAGTTCAACCTTGCCAAACTGGAACTATTCTCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS TCA 72 bp | TGCCAAAACTTCTCGAAATCTGTTAAGTTGATGGGCTaGTGTGATGTTGCCAAAGAGTTGACTGAAGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: CQNFSKSVKLMG*CDVAKELTEVG Trigger: ACCAACTTCAGTCAACTCTTTGGCAACATCACATCAGCCCATCAACTTAACAGATTTCGAGAAGTTTTGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648118.1 |
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| CDS CAA 90 bp | ATGGTAGGTTCCATATTCTGTGTGAGAACACTGGGAACCTGTCCTTaGTGTTTTTGTCTACGTAACTGGAAATGGTGGGTATTTCATCTT | + |
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Preference number: 6 (lower is better) Translates to: MVGSIFCVRTLGTCP*CFCLRNWKWWVFHL Trigger: AAGATGAAATACCCACCATTTCCAGTTACGTAGACAAAAACACAAAGGACAGGTTCCCAGTGTTCTCACACAGAATATGGAACCTACCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000557640.2 ENST00000648118.1 |
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| CDS TCA 72 bp | CGAAATCTGCTGAGAATAGTTCCAGTTTGGCAAGGTTaGACTTGTGAGCAAAGAACTTCAAGTTGTCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: RNLLRIVPVWQG*TCEQRTSSCLC Trigger: ACAAAGACAACTTGAAGTTCTTTGCTCACAAGTTCAACCTTGCCAAACTGGAACTATTCTCAGCAGATTTCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557640.2 |
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| CDS CCA 72 bp | TTTCAGAACTTGCTTGAAGATGTAGACTATTTCCCATaGCAGTACATCATTTTCTGCCAAAACTTCTCGAAA | + |
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Preference number: 6 (lower is better) Translates to: FQNLLEDVDYFP*QYIIFCQNFSK Trigger: TTTCGAGAAGTTTTGGCAGAAAATGATGTACTGCCATGGGAAATAGTCTACATCTTCAAGCAAGTTCTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000557640.2 ENST00000648118.1 |
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