Pregenerated sensors for RCOR2 (Homo sapiens)
Ensembl gene IDs: ENSG00000167771Ensembl transcript IDs: ENST00000301459.5, ENST00000489217.1
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCGGGGCGCCCTaGAACCCCACCGCCCACCTG | + |
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Preference number: 4 (lower is better) Translates to: GCPKLWSYKDPARALVPSVLGAP*NPTAHL Trigger: CAGGTGGGCGGTGGGGTTCCAGGGCGCCCCGAGGAC...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CCA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTTCAGCGGCTGGGCGCTaGAGCGCAATCTGCGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: GCPKLWSYKDPARALVPSSAAGR*SAICAP Trigger: GGGGGCGCAGATTGCGCTCCAGCGCCCAGCCGCTGA...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR GCA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTTCTGCGCCTCTCAGCTaGGCCGGGGATGCCCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: GCPKLWSYKDPARALVPSSAPLS*AGDAPV Trigger: GACTGGGGCATCCCCGGCGCAGCTGAGAGGCGCAGA...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR TCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTGGGGGACGCAAGGGATaGGCGCAAGGTCCGGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSGGRKG*AQGPVR Trigger: CCGCACCGGACCTTGCGCTCATCCCTTGCGTCCCCC...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR TCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTTGGCGCAGGGGGCACTaGTCGGGGCACGGACGTGGA | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSWRRGH*SGHGRG Trigger: TCCACGTCCGTGCCCCGATCAGTGCCCCCTGCGCCA...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR GCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTACCCCACCGCCCACCTaGCCACGCCGTTCAGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSTPPPT*PRRSAA Trigger: AGCCGCTGAACGGCGTGGGCAGGTGGGCGGTGGGGT...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR GCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTCCCAGGGCCTGGGCGTaGATTCAGGGGCCGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSPRAWA*IQGPRG Trigger: CCCTCTCGGCCCCTGAATGCACGCCCAGGCCCTGGG...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR GCA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTCAGGGCTCAGGTACATaGCCTTGGGTGGGCGACGCC | + |
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Preference number: 4 (lower is better) Translates to: GCPKLWSYKDPARALVPSQGSGT*PWVGDA Trigger: GGCGTCGCCCACCCAAGGGCATGTACCTGAGCCCTG...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTGGCAGGAGGTCAGCGTaGCTAGGGTCCGGCGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSGRRSA*LGSGGV Trigger: CACCCCGCCGGACCCTAGCCACGCTGACCTCCTGCC...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR GCA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGAGAGCGACAGTGGTTaGCGCACTCGCTCCGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: GCPKLWSYKDPARALVPSESDSG*RTRSEC Trigger: GCACTCGGAGCGAGTGCGGCAACCACTGTCGCTCTC...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CCA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTTACGCCCCTCAGGGTTaGGGTTCCCCTGAAGTCGGG | + |
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Preference number: 4 (lower is better) Translates to: GCPKLWSYKDPARALVPSYAPQG*GSPEVG Trigger: CCCGACTTCAGGGGAACCCCAACCCTGAGGGGCGTA...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CCA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTCTTTTTCCCAGGGCCTaGGCGTGCATTCAGGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: GCPKLWSYKDPARALVPSLFPRA*ACIQGP Trigger: CGGCCCCTGAATGCACGCCCAGGCCCTGGGAAAAAG...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CCA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTTCAGGTACATGCCCTTaGGTGGGCGACGCCGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: GCPKLWSYKDPARALVPSSGTCP*VGDAGF Trigger: GAACCCGGCGTCGCCCACCCAAGGGCATGTACCTGA...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CCA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTCCCAAAGGGCGGGGCTaGGCTGTCCGAAACTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: GCPKLWSYKDPARALVPSPKGRG*AVRNSG Trigger: ACCAGAGTTTCGGACAGCCCAGCCCCGCCCTTTGGG...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR TCA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTTTCCTGACACTGCCGTaGGGCCTTCAGGGCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GCPKLWSYKDPARALVPSFLTLP*GLQGSG Trigger: ACCTGAGCCCTGAAGGCCTCACGGCAGTGTCAGGAA...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR TCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTCAAGACCTCGGAGCGTaGGGTTGGCAAGGTCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSQDLGA*GWQGPG Trigger: GCCCGGACCTTGCCAACCTCACGCTCCGAGGTCTTG...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR GCA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTCGGATCATGCTGTCGTaGGAGTGCTCCTCCTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCPKLWSYKDPARALVPSRIMLS*ECSSSL Trigger: CAGCGAGGAGGAGCACTCGCACGACAGCATGATCCG...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTACGCCGTTCAGCGGCTaGGCGCTGGAGCGCAATCTG | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSTPFSG*ALERNL Trigger: CAGATTGCGCTCCAGCGCCCAGCCGCTGAACGGCGT...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTCCTGGAGCCCGTGGTTaGTGGAGGACGTCAGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSPGARG*WRTSGL Trigger: GAGCCCTGACGTCCTCCACCAACCACGGGCTCCAGG...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR TCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTGGTGCGGCTGGGGCGTaGTTACTATGTACGCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSGAAGA*LLCTPL Trigger: GAGGGGCGTACATAGTAATCACGCCCCAGCCGCACC...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR TCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTAAGGTCCGGGCTTCCTaGCACTGCCGTGAGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSKVRAS*HCREAF Trigger: GAAGGCCTCACGGCAGTGTCAGGAAGCCCGGACCTT...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR GCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTGAGCGCAAGGTCCGGTaGGGCTGGGGCGTGATTACT | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSERKVR*GWGVIT Trigger: AGTAATCACGCCCCAGCCGCACCGGACCTTGCGCTC...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTGTACATGCCCTTGGGTaGGCGACGCCGGGTTCGCAA | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSVHALG*ATPGSQ Trigger: TTGCGAACCCGGCGTCGCCCACCCAAGGGCATGTAC...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTGGAGCCCGTGGTTGGTaGAGGACGTCAGGGCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSGARGW*RTSGLR Trigger: TCTGAGCCCTGACGTCCTCCACCAACCACGGGCTCC...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CCA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTAGAGGCTCTCTCTTaGGATCTGCAGGATCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GCPKLWSYKDPARALVPSVEALS*DLQDRA Trigger: AGCCCGATCCTGCAGATCCCAAGAGAGAGCCTCTAC...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CCA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGGCTGTCCGAAACTCTaGTCTTACAAAGACCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: GCPKLWSYKDPARALVPSGCPKL*SYKDPA Trigger: GGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR TCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTGGATGGTGGCGGTACTaGGACACCTGGACCTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSGWWRY*DTWTSF Trigger: AAAGGAGGTCCAGGTGTCTCAGTACCGCCACCATCC...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR GCA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTTCCACATCGTGCTTATaGCACAGAAGCATGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GCPKLWSYKDPARALVPSSTSCL*HRSMPS Trigger: GCTGGGCATGCTTCTGTGGCATAAGCACGATGTGGA...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR GCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTCTCTCTCTTGGGATCTaGAGGATCGGGCTCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSLSLGI*RIGLSL Trigger: GAGGGAGAGCCCGATCCTGCAGATCCCAAGAGAGAG...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CCA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTAAGTTTGTGCAGAAGTaGGGGACGCAAGGGATGAGC | + |
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Preference number: 4 (lower is better) Translates to: GCPKLWSYKDPARALVPSKFVQK*GTQGMS Trigger: GCTCATCCCTTGCGTCCCCCACTTCTGCACAAACTT...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR TCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTTTGAGGGAGATGAGCTaGGAGTCAAGACCTCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSLREMS*ESRPRS Trigger: GCTCCGAGGTCTTGACTCTCAGCTCATCTCCCTCAA...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR TCA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTTACCTACGGATGGCTTaGACAGCCAAAAGCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: GCPKLWSYKDPARALVPSYLRMA*TAKSCS Trigger: TGAGCAGCTTTTGGCTGTTCAAGCCATCCGTAGGTA...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR GCA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTCGTCAGAAAAGTTTGTaGAGAAGTGGGGGACGCAAG | + |
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Preference number: 4 (lower is better) Translates to: GCPKLWSYKDPARALVPSRQKSL*RSGGRK Trigger: CTTGCGTCCCCCACTTCTGCACAAACTTTTCTGACG...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR GCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTTTCCAACGCGGATCATaGTGTCGTGCGAGTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSFQRGS*CRASAP Trigger: AGGAGCACTCGCACGACAGCATGATCCGCGTTGGAA...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTAAGGTCCGGTGCGGCTaGGGCGTGATTACTATGTAC | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSKVRCG*GVITMY Trigger: GTACATAGTAATCACGCCCCAGCCGCACCGGACCTT...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CCA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTATCTGCTGGATCCGCTaGAAGCATTTGCCATGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GCPKLWSYKDPARALVPSICWIR*KHLPWK Trigger: CTTCCATGGCAAATGCTTCCAGCGGATCCAGCAGAT...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR GCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTTTGTCAGGCAGCATCTaGTGGATCCGCTGGAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSLSGSI*WIRWKH Trigger: ATGCTTCCAGCGGATCCAGCAGATGCTGCCTGACAA...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTTTCATGCTCTGTACCTaGCGCTTGAGGGAGATGAGC | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSFMLCT*RLREMS Trigger: GCTCATCTCCCTCAAGCGCCAGGTACAGAGCATGAA...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR GCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTGACTTCTCCACATCGTaGTTATGCCACAGAAGCATG | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSDFSTS*LCHRSM Trigger: CATGCTTCTGTGGCATAAGCACGATGTGGAGAAGTC...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CCA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTGAGACCGATGTAATCTaGACCTCATCATCTTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: KLWSYKDPARALVPSVLSETDVI*TSSSSS Trigger: AGAGGAAGATGATGAGGTCCAGATTACATCGGTCTC...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS CCA 90 bp | CCTGGAGAGGTCGCCACTGAGGTTAGGAGAGGCAGGAGGTCAGCGTaGCTAGGGTCCGGCGGGGTGGGAGCCCACCTGGTAGCCCCAGCG | + |
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Preference number: 5 (lower is better) Translates to: PGEVATEVRRGRRSA*LGSGGVGAHLVAPA Trigger: CGCTGGGGCTACCAGGTGGGCTCCCACCCCGCCGGACCCTAGCCACGCTGACCTCCTGCCTCTCCTAACCTCAGTGGCGACCTCTCCAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS TCA 90 bp | CCCTTGGGTGGGCGACGCCGGGTTCGCAAGGGATGGTGGCGGTACTaGGACACCTGGACCTCCTTTTTCCCAGGGCCTGGGCGTGCATTC | + |
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Preference number: 5 (lower is better) Translates to: PLGGRRRVRKGWWRY*DTWTSFFPGPGRAF Trigger: GAATGCACGCCCAGGCCCTGGGAAAAAGGAGGTCCAGGTGTCTCAGTACCGCCACCATCCCTTGCGAACCCGGCGTCGCCCACCCAAGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS TCA 90 bp | AGAGTCAAGACCTCGGAGCGTGAGGTTGGCAAGGTCCGGGCTTCCTaGCACTGCCGTGAGGCCTTCAGGGCTCAGGTACATGCCCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: RVKTSEREVGKVRAS*HCREAFRAQVHALG Trigger: CCCAAGGGCATGTACCTGAGCCCTGAAGGCCTCACGGCAGTGTCAGGAAGCCCGGACCTTGCCAACCTCACGCTCCGAGGTCTTGACTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CAA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTCTCAGGTACATGCCCTaGGGTGGGCGACGCCGGGTT | + |
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Preference number: 5 (lower is better) Translates to: GCPKLWSYKDPARALVPSLRYMP*GGRRRV Trigger: AACCCGGCGTCGCCCACCCAAGGGCATGTACCTGAG...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS TCA 90 bp | TCTAAGGACCAAGGCGGCGCCTCACCTCGCCTCGCCTCTCCTCTCTaGGGGGTTTCTCTCACCCCCTTCTCACCTCATCATCTTCCTCTA | + |
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Preference number: 5 (lower is better) Translates to: SKDQGGASPRLASPL*GVSLTPFSPHHLPL Trigger: TAGAGGAAGATGATGAGGTGAGAAGGGGGTGAGAGAAACCCCTCAGAGAGGAGAGGCGAGGCGAGGTGAGGCGCCGCCTTGGTCCTTAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000489217.1 |
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| CDS-3UTR CAA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTCCTCGGAGCGTGAGGTaGGCAAGGTCCGGGCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: KLWSYKDPARALVPSVLSPRSVR*ARSGLP Trigger: AGGAAGCCCGGACCTTGCCAACCTCACGCTCCGAGG...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CAA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTTCCTGGAGCCCGTGGTaGGTGGAGGACGTCAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: KLWSYKDPARALVPSVLSSWSPW*VEDVRA Trigger: AGCCCTGACGTCCTCCACCAACCACGGGCTCCAGGA...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CAA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGGGCGTCAGAAAAGTTaGTGCAGAAGTGGGGGACGC | + |
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Preference number: 5 (lower is better) Translates to: GCPKLWSYKDPARALVPSGRQKS*CRSGGR Trigger: GCGTCCCCCACTTCTGCACAAACTTTTCTGACGCCC...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CAA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTGGTAGAGGCTCTCTCTaGGGATCTGCAGGATCGGGC | + |
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Preference number: 5 (lower is better) Translates to: KLWSYKDPARALVPSVLSGRGSL*GSAGSG Trigger: GCCCGATCCTGCAGATCCCAAGAGAGAGCCTCTACC...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CAA 90 bp | GGCTGTCCGAAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGCCATCGCAATGTACTaGTCAAGCTTGGCATCTGAC | + |
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Preference number: 5 (lower is better) Translates to: GCPKLWSYKDPARALVPSAIAMY*SSLASD Trigger: GTCAGATGCCAAGCTTGACAAGTACATTGCGATGGC...AGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTTCGGACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CAA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTATCCGCTGGAAGCATTaGCCATGGAAGCCAAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: KLWSYKDPARALVPSVLSIRWKH*PWKPKA Trigger: GGCCTTTGGCTTCCATGGCAAATGCTTCCAGCGGAT...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CAA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTAGGCTGGGAATCAACTaGTCAGGCAGCATCTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: KLWSYKDPARALVPSVLSRLGIN*SGSICW Trigger: CCAGCAGATGCTGCCTGACAAGTTGATTCCCAGCCT...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS-3UTR CAA 90 bp | AAACTCTGGTCTTACAAAGACCCCGCCAGAGCCCTAGTCCCTTCTGTCCTCAGTATACCTACGGATGGCTaGAACAGCCAAAAGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: KLWSYKDPARALVPSVLSIPTDG*NSQKLL Trigger: GAGCAGCTTTTGGCTGTTCAAGCCATCCGTAGGTAT...ACTGAGGACAGAAGGGACTAGGGCTCTGGCGGGGTCTTTGTAAGACCAGAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS GCA 72 bp | CTGTCCTCGGGGCGCCCTGGAACCCCACCGCCCACCTaGCCACGCCGTTCAGCGGCTGGGCGCTGGAGCGCA | + |
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Preference number: 6 (lower is better) Translates to: LSSGRPGTPPPT*PRRSAAGRWSA Trigger: TGCGCTCCAGCGCCCAGCCGCTGAACGGCGTGGGCAGGTGGGCGGTGGGGTTCCAGGGCGCCCCGAGGACAG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS CCA 72 bp | GTCGCCACTGAGGTTAGGAGAGGCAGGAGGTCAGCGTaGCTAGGGTCCGGCGGGGTGGGAGCCCACCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: VATEVRRGRRSA*LGSGGVGAHLV Trigger: TACCAGGTGGGCTCCCACCCCGCCGGACCCTAGCCACGCTGACCTCCTGCCTCTCCTAACCTCAGTGGCGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS TCA 72 bp | GGGCGACGCCGGGTTCGCAAGGGATGGTGGCGGTACTaGGACACCTGGACCTCCTTTTTCCCAGGGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GRRRVRKGWWRY*DTWTSFFPGPG Trigger: CCCAGGCCCTGGGAAAAAGGAGGTCCAGGTGTCTCAGTACCGCCACCATCCCTTGCGAACCCGGCGTCGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS CCA 72 bp | CGTGAGGCCTTCAGGGCTCAGGTACATGCCCTTGGGTaGGCGACGCCGGGTTCGCAAGGGATGGTGGCGGTA | + |
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Preference number: 6 (lower is better) Translates to: REAFRAQVHALG*ATPGSQGMVAV Trigger: TACCGCCACCATCCCTTGCGAACCCGGCGTCGCCCACCCAAGGGCATGTACCTGAGCCCTGAAGGCCTCACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS CAA 72 bp | ACTGCCGTGAGGCCTTCAGGGCTCAGGTACATGCCCTaGGGTGGGCGACGCCGGGTTCGCAAGGGATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: TAVRPSGLRYMP*GGRRRVRKGWW Trigger: CCACCATCCCTTGCGAACCCGGCGTCGCCCACCCAAGGGCATGTACCTGAGCCCTGAAGGCCTCACGGCAGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS CCA 72 bp | GGGGACGCAAGGGATGAGCGCAAGGTCCGGTGCGGCTaGGGCGTGATTACTATGTACGCCCCTCAGGGTTGG | + |
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Preference number: 6 (lower is better) Translates to: GDARDERKVRCG*GVITMYAPQGW Trigger: CCAACCCTGAGGGGCGTACATAGTAATCACGCCCCAGCCGCACCGGACCTTGCGCTCATCCCTTGCGTCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS TCA 72 bp | ACCTCGGAGCGTGAGGTTGGCAAGGTCCGGGCTTCCTaGCACTGCCGTGAGGCCTTCAGGGCTCAGGTACAT | + |
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Preference number: 6 (lower is better) Translates to: TSEREVGKVRAS*HCREAFRAQVH Trigger: ATGTACCTGAGCCCTGAAGGCCTCACGGCAGTGTCAGGAAGCCCGGACCTTGCCAACCTCACGCTCCGAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS CCA 72 bp | CCACGAGCCAGGGCGTCAGAAAAGTTTGTGCAGAAGTaGGGGACGCAAGGGATGAGCGCAAGGTCCGGTGCG | + |
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Preference number: 6 (lower is better) Translates to: PRARASEKFVQK*GTQGMSARSGA Trigger: CGCACCGGACCTTGCGCTCATCCCTTGCGTCCCCCACTTCTGCACAAACTTTTCTGACGCCCTGGCTCGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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| CDS TCA 72 bp | TTCATGCTCTGTACCTGGCGCTTGAGGGAGATGAGCTaGGAGTCAAGACCTCGGAGCGTGAGGTTGGCAAGG | + |
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Preference number: 6 (lower is better) Translates to: FMLCTWRLREMS*ESRPRSVRLAR Trigger: CCTTGCCAACCTCACGCTCCGAGGTCTTGACTCTCAGCTCATCTCCCTCAAGCGCCAGGTACAGAGCATGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000301459.5 |
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