RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RCOR1 (Homo sapiens)

Ensembl gene IDs: ENSG00000089902

Ensembl transcript IDs: ENST00000262241.7, ENST00000558495.1, ENST00000560472.1

Found 252 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGAGACTGCCTGCTCTGAAGCTGCTGACTGGGAAGAGCTGCCATTaGTGGGGCTCGGGGGCTCCGGCGGGAGAGGCGGTTCCCAGAGTC +
Preference number: 1 (lower is better)
Translates to: RRLPALKLLTGKSCH*WGSGAPAGEAVPRV
Trigger: GACTCTGGGAACCGCCTCTCCCGCCGGAGCCCCCGAGCCCCACCAATGGCAGCTCTTCCCAGTCAGCAGCTTCAGAGCAGGCAGTCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CCA 90 bp AGACTGCCTGCTCTGAAGCTGCTGACTGGGAAGAGCTGCCATTGGTaGGGCTCGGGGGCTCCGGCGGGAGAGGCGGTTCCCAGAGTCACA +
Preference number: 1 (lower is better)
Translates to: RLPALKLLTGKSCHW*GSGAPAGEAVPRVT
Trigger: TGTGACTCTGGGAACCGCCTCTCCCGCCGGAGCCCCCGAGCCCCACCAATGGCAGCTCTTCCCAGTCAGCAGCTTCAGAGCAGGCAGTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CCA 90 bp AGAGTCGGGCCTTCCAAGGAGACTGCCTGCTCTGAAGCTGCTGACTaGGAAGAGCTGCCATTGGTGGGGCTCGGGGGCTCCGGCGGGAGA +
Preference number: 1 (lower is better)
Translates to: RVGPSKETACSEAAD*EELPLVGLGGSGGR
Trigger: TCTCCCGCCGGAGCCCCCGAGCCCCACCAATGGCAGCTCTTCCCAGTCAGCAGCTTCAGAGCAGGCAGTCTCCTTGGAAGGCCCGACTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR GCA 90 bp TGTGCAGGCCGTGAGACTTCCCCAGCACGTGGGCAGAGTGTGAGATaGAGTGGAGCTCTCTGGGAAGTGGCGCCAACATGGAGGAACGAG +
Preference number: 1 (lower is better)
Translates to: CAGRETSPARGQSVR*SGALWEVAPTWRNE
Trigger: CTCGTTCCTCCATGTTGGCGCCACTTCCCAGAGAGCTCCACTGCATCTCACACTCTGCCCACGTGCTGGGGAAGTCTCACGGCCTGCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR GCA 90 bp TGCAGGCCATGCAGGAACAGAGTCGGGCCTTCCAAGGAGACTGCCTaGTCTGAAGCTGCTGACTGGGAAGAGCTGCCATTGGTGGGGCTC +
Preference number: 1 (lower is better)
Translates to: CRPCRNRVGPSKETA*SEAADWEELPLVGL
Trigger: GAGCCCCACCAATGGCAGCTCTTCCCAGTCAGCAGCTTCAGAGCAGGCAGTCTCCTTGGAAGGCCCGACTCTGTTCCTGCATGGCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR TCA 90 bp TTGCTAACCCTGTCTCCAGGTAGCAGCAGCAATCCGGGACTCCTCTaGTGCTTCCCAGGCTTTTACGTGACCAACACACACCTGGCACGG +
Preference number: 1 (lower is better)
Translates to: LLTLSPGSSSNPGLL*CFPGFYVTNTHLAR
Trigger: CCGTGCCAGGTGTGTGTTGGTCACGTAAAAGCCTGGGAAGCATCAGAGGAGTCCCGGATTGCTGCTGCTACCTGGAGACAGGGTTAGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CCA 90 bp ACTTCCCCAGCACGTGGGCAGAGTGTGAGATGCAGTGGAGCTCTCTaGGAAGTGGCGCCAACATGGAGGAACGAGCAAAGAATTAAGGCA +
Preference number: 1 (lower is better)
Translates to: TSPARGQSVRCSGAL*EVAPTWRNEQRIKA
Trigger: TGCCTTAATTCTTTGCTCGTTCCTCCATGTTGGCGCCACTTCCCAGAGAGCTCCACTGCATCTCACACTCTGCCCACGTGCTGGGGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CCA 90 bp CAGAGTGTGAGATGCAGTGGAGCTCTCTGGGAAGTGGCGCCAACATaGAGGAACGAGCAAAGAATTAAGGCAGATGGAGCACAGGACTGG +
Preference number: 1 (lower is better)
Translates to: QSVRCSGALWEVAPT*RNEQRIKADGAQDW
Trigger: CCAGTCCTGTGCTCCATCTGCCTTAATTCTTTGCTCGTTCCTCCATGTTGGCGCCACTTCCCAGAGAGCTCCACTGCATCTCACACTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR GCA 90 bp AGTCCACACCAAGTGTTCAAAGCCACCAGTTTCTCAGGAGGCAGATaGATATCTGACATCCAGAACAGGAGCCTCGTCTTCCTCTTCGGG +
Preference number: 1 (lower is better)
Translates to: SPHQVFKATSFSGGR*ISDIQNRSLVFLFG
Trigger: CCCGAAGAGGAAGACGAGGCTCCTGTTCTGGATGTCAGATATGCATCTGCCTCCTGAGAAACTGGTGGCTTTGAACACTTGGTGTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560472.1
3UTR GCA 90 bp GCTGCTGTGATCACACGTGATTCTTCAGGGCTGGAGACCATTCAGTaGCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGC +
Preference number: 1 (lower is better)
Translates to: AAVITRDSSGLETIQ*QEPSKGIVQNTDQG
Trigger: GCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAATGGTCTCCAGCCCTGAAGAATCACGTGTGATCACAGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR TCA 90 bp AACAACAACAACAACAAAAGCGACTTCAGCGTATTGAGTGCAGTCTaGATGGCCGTGGGGTGGGAACAGGGTATGTTAGAATGCAGGCTG +
Preference number: 1 (lower is better)
Translates to: NNNNNKSDFSVLSAV*MAVGWEQGMLECRL
Trigger: CAGCCTGCATTCTAACATACCCTGTTCCCACCCCACGGCCATTCAGACTGCACTCAATACGCTGAAGTCGCTTTTGTTGTTGTTGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR TCA 90 bp CACTGCAGCAATTGCCTACTGCTTCTGTTAGCAAGAAGGAGGTCTTaGGGGAAGCACGGAGAACCTAAAGCTTCAGCTCATACCTTAGTG +
Preference number: 1 (lower is better)
Translates to: HCSNCLLLLLARRRS*GKHGEPKASAHTLV
Trigger: CACTAAGGTATGAGCTGAAGCTTTAGGTTCTCCGTGCTTCCCTCAAGACCTCCTTCTTGCTAACAGAAGCAGTAGGCAATTGCTGCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR TCA 90 bp GGTGGCTGTAAACACTCATCATCACACAACATGCATAGCCTCTGCTaGCCTTCCCTTCTTCTGAATGCGACGCCACTGCAATTGTGCTTT +
Preference number: 1 (lower is better)
Translates to: GGCKHSSSHNMHSLC*PSLLLNATPLQLCF
Trigger: AAAGCACAATTGCAGTGGCGTCGCATTCAGAAGAAGGGAAGGTCAGCAGAGGCTATGCATGTTGTGTGATGATGAGTGTTTACAGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CCA 90 bp TCTTCGGGCATCTTAATGGAATTATCTGGGGACTTCACAGGCTTCTaGTTACTGGGCCCATTGGTCTCTTCTTTACCATGTTCTGCCTCC +
Preference number: 1 (lower is better)
Translates to: SSGILMELSGDFTGF*LLGPLVSSLPCSAS
Trigger: GGAGGCAGAACATGGTAAAGAAGAGACCAATGGGCCCAGTAACCAGAAGCCTGTGAAGTCCCCAGATAATTCCATTAAGATGCCCGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560472.1
3UTR TCA 90 bp CATCATCACACAACATGCATAGCCTCTGCTGACCTTCCCTTCTTCTaGATGCGACGCCACTGCAATTGTGCTTTACTACAGGTAAGACAG +
Preference number: 1 (lower is better)
Translates to: HHHTTCIASADLPFF*MRRHCNCALLQVRQ
Trigger: CTGTCTTACCTGTAGTAAAGCACAATTGCAGTGGCGTCGCATTCAGAAGAAGGGAAGGTCAGCAGAGGCTATGCATGTTGTGTGATGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CCA 90 bp TGGAATTATCTGGGGACTTCACAGGCTTCTGGTTACTGGGCCCATTaGTCTCTTCTTTACCATGTTCTGCCTCCCATTCTTGTAAAACTT +
Preference number: 1 (lower is better)
Translates to: WNYLGTSQASGYWAH*SLLYHVLPPILVKL
Trigger: AAGTTTTACAAGAATGGGAGGCAGAACATGGTAAAGAAGAGACCAATGGGCCCAGTAACCAGAAGCCTGTGAAGTCCCCAGATAATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560472.1
3UTR CCA 90 bp AACTGTACCCCATGTTTAGGGAAATGTGAGTTGCATCAGGATGCTTaGCATGATAAAGGTTATGATGCAGTCTGGCAATATATATTAGTT +
Preference number: 1 (lower is better)
Translates to: NCTPCLGKCELHQDA*HDKGYDAVWQYILV
Trigger: AACTAATATATATTGCCAGACTGCATCATAACCTTTATCATGCCAAGCATCCTGATGCAACTCACATTTCCCTAAACATGGGGTACAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CCA 90 bp AAAAGCAGGGATCCAGTTAGCGTAATGCACTGTTTGGCTTATTTTTaGTGTGCAATTATACCAATAGTACATCTGATATTTAGAATGACA +
Preference number: 1 (lower is better)
Translates to: KSRDPVSVMHCLAYF*CAIIPIVHLIFRMT
Trigger: TGTCATTCTAAATATCAGATGTACTATTGGTATAATTGCACACCAAAAATAAGCCAAACAGTGCATTACGCTAACTGGATCCCTGCTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CCA 90 bp CCAGGCACACCGAGAGAACGCGGAACAACGCGCAGCTTTCATAAACCAGCGCCAGGGGTCAGGAAAAGATaGGGTGGCAACCACCCTGGG +
Preference number: 2 (lower is better)
Translates to: PGTPRERGTTRSFHKPAPGVRKR*GGNHPG
Trigger: CCCAGGGTGGTTGCCACCCCATCTTTTCCTGACCCC...TGGCGCTGGTTTATGAAAGCTGCGCGTTGTTCCGCGTTCTCTCGGTGTGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CCA 90 bp CCAGGCACACCGAGAGAACGCGGAACAACGCGCAGCTTTCATAAACCAGCGCCAGACTTCCCCAGCACGTaGGCAGAGTGTGAGATGCAG +
Preference number: 2 (lower is better)
Translates to: PGTPRERGTTRSFHKPAPDFPST*AECEMQ
Trigger: CTGCATCTCACACTCTGCCCACGTGCTGGGGAAGTC...TGGCGCTGGTTTATGAAAGCTGCGCGTTGTTCCGCGTTCTCTCGGTGTGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CCA 90 bp AGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTTTAGGTGACCTGGCTTGCAGTGGAGCTCTCTaGGAAGTGGCGCCAACATGG +
Preference number: 2 (lower is better)
Translates to: RDWQKEHRTGPLGLGDLACSGAL*EVAPTW
Trigger: CCATGTTGGCGCCACTTCCCAGAGAGCTCCACTGCA...AGCCAGGTCACCTAAACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CCA 90 bp ACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTGCCAACACTAATGTAAAGAGCTGCCATTGGTaGGGCTCGGGGGCTCCGGCG +
Preference number: 2 (lower is better)
Translates to: TTRHLCYTSTRLCANTNVKSCHW*GSGAPA
Trigger: CGCCGGAGCCCCCGAGCCCCACCAATGGCAGCTCTT...TACATTAGTGTTGGCACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR GCA 90 bp AGGTCAGCTGCTGTGATCACACGTGATTCTTCAGGGCTGGAGACCATTCAGTGCAGAATGCAGGCTGTCTaGTCAACCCTCAGCAGGCCC +
Preference number: 2 (lower is better)
Translates to: RSAAVITRDSSGLETIQCRMQAV*STLSRP
Trigger: GGGCCTGCTGAGGGTTGAGCAGACAGCCTGCATTCT...GCACTGAATGGTCTCCAGCCCTGAAGAATCACGTGTGATCACAGCAGCTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CCA 90 bp AGGTCAGCTGCTGTGATCACACGTGATTCTTCAGGGCTGGAGACCATTCAGTGCGAGTGTGAGATGCAGTaGAGCTCTCTGGGAAGTGGC +
Preference number: 2 (lower is better)
Translates to: RSAAVITRDSSGLETIQCECEMQ*SSLGSG
Trigger: GCCACTTCCCAGAGAGCTCCACTGCATCTCACACTC...GCACTGAATGGTCTCCAGCCCTGAAGAATCACGTGTGATCACAGCAGCTGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CCA 90 bp GAGGCAGATGCATATCTGACATCCAGAACAGGAGCCTCGTCTTCCTCTTCGGGCGACTTCACAGGCTTCTaGTTACTGGGCCCATTGGTC +
Preference number: 2 (lower is better)
Translates to: EADAYLTSRTGASSSSSGDFTGF*LLGPLV
Trigger: GACCAATGGGCCCAGTAACCAGAAGCCTGTGAAGTC...GCCCGAAGAGGAAGACGAGGCTCCTGTTCTGGATGTCAGATATGCATCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560472.1
3UTR-3UTR TCA 90 bp AAGCTGCAGAGATTCAGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTTGCTGTGATCACACGTaGTTCTTCAGGGCTGGAGAC +
Preference number: 2 (lower is better)
Translates to: KLQRFRDWQKEHRTGPLGCCDHT*FFRAGD
Trigger: GTCTCCAGCCCTGAAGAATCACGTGTGATCACAGCA...ACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCTGAATCTCTGCAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CCA 90 bp ACACTGTACACCCAGACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTGGGTGGCAACCACCCTaGGGTCACAATGCTGAAAAG +
Preference number: 2 (lower is better)
Translates to: TLYTQTTRHLCYTSTRLCGWQPP*GHNAEK
Trigger: CTTTTCAGCATTGTGACCCCAGGGTGGTTGCCACCC...ACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGTCTGGGTGTACAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR GCA 90 bp ACACTGTACACCCAGACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTTGCACTGTCAGAATCTaGAGCAAGCTCTCCCCTGTC +
Preference number: 2 (lower is better)
Translates to: TLYTQTTRHLCYTSTRLCCTVRI*SKLSPV
Trigger: GACAGGGGAGAGCTTGCTGCAGATTCTGACAGTGCA...ACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGTCTGGGTGTACAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CCA 90 bp AAGCTGCAGAGATTCAGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTATACAGATCAAGGCCTaGCACTGCTGGTCAGTTTGC +
Preference number: 2 (lower is better)
Translates to: KLQRFRDWQKEHRTGPLGIQIKA*HCWSVC
Trigger: GCAAACTGACCAGCAGTGCCAGGCCTTGATCTGTAT...ACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCTGAATCTCTGCAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR TCA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGCACGTGGGCAGAGTGTaGGATGCAGTGGAGCTCTCT +
Preference number: 2 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLHVGRV*DAVELS
Trigger: AGAGAGCTCCACTGCATCTCACACTCTGCCCACGTG...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR GCA 90 bp ACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTGCCAACACTAATGTAGGGCAGAGTGTGAGATaGAGTGGAGCTCTCTGGGAA +
Preference number: 2 (lower is better)
Translates to: TTRHLCYTSTRLCANTNVGQSVR*SGALWE
Trigger: TTCCCAGAGAGCTCCACTGCATCTCACACTCTGCCC...TACATTAGTGTTGGCACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR GCA 90 bp CTTGTTCCCAGTCCAACCAAAAGGCATTACAGACCACTCTGTAGGTTATTTCTTCTGACTGGGAAGAGCTaGCATTGGTGGGGCTCGGGG +
Preference number: 2 (lower is better)
Translates to: LVPSPTKRHYRPLCRLFLLTGKS*HWWGSG
Trigger: CCCCGAGCCCCACCAATGGCAGCTCTTCCCAGTCAG...AAGAAATAACCTACAGAGTGGTCTGTAATGCCTTTTGGTTGGACTGGGAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR GCA 90 bp GGACCACTAGGTTTAGGTGACCTGGCTACCTGGAGTCCATCTGAGGAAAGTTTCCTGGAGACCATTCAGTaGCAGGAACCAAGTAAAGGG +
Preference number: 2 (lower is better)
Translates to: GPLGLGDLATWSPSEESFLETIQ*QEPSKG
Trigger: CCCTTTACTTGGTTCCTGGCACTGAATGGTCTCCAG...GAAACTTTCCTCAGATGGACTCCAGGTAGCCAGGTCACCTAAACCTAGTGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CCA 90 bp GCTCAACCCTCAGCAGGCCCATGGTCTGATAAGATAACAAAAGTGATTCTGGAAGAGCTCTCTGGGAAGTaGCGCCAACATGGAGGAACG +
Preference number: 2 (lower is better)
Translates to: AQPSAGPWSDKITKVILEELSGK*RQHGGT
Trigger: CGTTCCTCCATGTTGGCGCCACTTCCCAGAGAGCTC...TTCCAGAATCACTTTTGTTATCTTATCAGACCATGGGCCTGCTGAGGGTTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CAA 90 bp GAAGTGGCGTCTCCACAAACACTGTACACCCAGACAACGCGGCATTaGTGTTACACTAGCACCCGACTGTGTGCCAACACTAATGTAATC +
Preference number: 2 (lower is better)
Translates to: EVASPQTLYTQTTRH*CYTSTRLCANTNVI
Trigger: GATTACATTAGTGTTGGCACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGTCTGGGTGTACAGTGTTTGTGGAGACGCCACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR TCA 90 bp ACACTGTACACCCAGACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTCTGGGGTCACAATGCTaGAAAGTTGAAGGCAGAAAG +
Preference number: 2 (lower is better)
Translates to: TLYTQTTRHLCYTSTRLCLGSQC*KVEGRK
Trigger: CTTTCTGCCTTCAACTTTTCAGCATTGTGACCCCAG...ACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGTCTGGGTGTACAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR TCA 90 bp GCTCAACCCTCAGCAGGCCCATGGTCTGATAAGATAACAAAAGTGATTCTGGAAAAGCACCAGGTACAGTaGTGTGGGCCGAACCTCTTG +
Preference number: 2 (lower is better)
Translates to: AQPSAGPWSDKITKVILEKHQVQ*CGPNLL
Trigger: CAAGAGGTTCGGCCCACATCACTGTACCTGGTGCTT...TTCCAGAATCACTTTTGTTATCTTATCAGACCATGGGCCTGCTGAGGGTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR TCA 90 bp TTTACTACAGGTAAGACAGGTAAGAGAAGCTGCAGAGATTCAGGGACTGGCAGAGTATTGAGTGCAGTCTaGATGGCCGTGGGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: FTTGKTGKRSCRDSGTGRVLSAV*MAVGWE
Trigger: TTCCCACCCCACGGCCATTCAGACTGCACTCAATAC...TCTGCCAGTCCCTGAATCTCTGCAGCTTCTCTTACCTGTCTTACCTGTAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR GCA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGTCCAAGGAGACTGCCTaGTCTGAAGCTGCTGACTGG +
Preference number: 2 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLSKETA*SEAADW
Trigger: CCAGTCAGCAGCTTCAGAGCAGGCAGTCTCCTTGGA...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR GCA 90 bp GCTCAACCCTCAGCAGGCCCATGGTCTGATAAGATAACAAAAGTGATTCTGGAAAGAAACTGCAGGCCATaGAGGAACAGAGTCGGGCCT +
Preference number: 2 (lower is better)
Translates to: AQPSAGPWSDKITKVILERNCRP*RNRVGP
Trigger: AGGCCCGACTCTGTTCCTGCATGGCCTGCAGTTTCT...TTCCAGAATCACTTTTGTTATCTTATCAGACCATGGGCCTGCTGAGGGTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR GCA 90 bp TTTACTACAGGTAAGACAGGTAAGAGAAGCTGCAGAGATTCAGGGACTGGCAGAATCAAGGCCTGGCACTaGTGGTCAGTTTGCCACGCT +
Preference number: 2 (lower is better)
Translates to: FTTGKTGKRSCRDSGTGRIKAWH*WSVCHA
Trigger: AGCGTGGCAAACTGACCAGCAGTGCCAGGCCTTGAT...TCTGCCAGTCCCTGAATCTCTGCAGCTTCTCTTACCTGTCTTACCTGTAGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR GCA 90 bp AGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTTTAGGTGACCTGGCTCAGTTTAAAACACAGTaGTATCTTACGCGGGAAAGC +
Preference number: 2 (lower is better)
Translates to: RDWQKEHRTGPLGLGDLAQFKTQ*YLTRES
Trigger: GCTTTCCCGCGTAAGATAGCACTGTGTTTTAAACTG...AGCCAGGTCACCTAAACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CCA 90 bp ACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTGCCAACACTAATGTATCTGAAGCTGCTGACTaGGAAGAGCTGCCATTGGTG +
Preference number: 2 (lower is better)
Translates to: TTRHLCYTSTRLCANTNVSEAAD*EELPLV
Trigger: CACCAATGGCAGCTCTTCCCAGTCAGCAGCTTCAGA...TACATTAGTGTTGGCACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CCA 90 bp GCTCAACCCTCAGCAGGCCCATGGTCTGATAAGATAACAAAAGTGATTCTGGAACCAGGTACAGTGATGTaGGCCGAACCTCTTGGAGGT +
Preference number: 2 (lower is better)
Translates to: AQPSAGPWSDKITKVILEPGTVM*AEPLGG
Trigger: ACCTCCAAGAGGTTCGGCCCACATCACTGTACCTGG...TTCCAGAATCACTTTTGTTATCTTATCAGACCATGGGCCTGCTGAGGGTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR TCA 90 bp TTTACTACAGGTAAGACAGGTAAGAGAAGCTGCAGAGATTCAGGGACTGGCAGAAATCCGGGACTCCTCTaGTGCTTCCCAGGCTTTTAC +
Preference number: 2 (lower is better)
Translates to: FTTGKTGKRSCRDSGTGRNPGLL*CFPGFY
Trigger: GTAAAAGCCTGGGAAGCATCAGAGGAGTCCCGGATT...TCTGCCAGTCCCTGAATCTCTGCAGCTTCTCTTACCTGTCTTACCTGTAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CCA 90 bp TTTACTACAGGTAAGACAGGTAAGAGAAGCTGCAGAGATTCAGGGACTGGCAGAGGCCCTCGTTGGAGTTaGCTCCATCTTTCCTTAGCT +
Preference number: 2 (lower is better)
Translates to: FTTGKTGKRSCRDSGTGRGPRWS*LHLSLA
Trigger: AGCTAAGGAAAGATGGAGCCAACTCCAACGAGGGCC...TCTGCCAGTCCCTGAATCTCTGCAGCTTCTCTTACCTGTCTTACCTGTAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CAA 90 bp GGGATAGTGCAGAATACAGATCAAGGCCTGGCACTGCTGGTCAGTTaGCCACGCTATATAAAAATTAGCATCAAGCTTCCAAGCACTGCC +
Preference number: 2 (lower is better)
Translates to: GIVQNTDQGLALLVS*PRYIKISIKLPSTA
Trigger: GGCAGTGCTTGGAAGCTTGATGCTAATTTTTATATAGCGTGGCAAACTGACCAGCAGTGCCAGGCCTTGATCTGTATTCTGCACTATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR TCA 90 bp ACACAGTGCTATCTTACGCGGGAAAGCACAACAAAGGCAGTCAAGGACAGCTCCACAATGCTGAAAAGTTaGAGGCAGAAAGCATTGAGG +
Preference number: 2 (lower is better)
Translates to: TQCYLTRESTTKAVKDSSTMLKS*RQKALR
Trigger: CCTCAATGCTTTCTGCCTTCAACTTTTCAGCATTGT...GGAGCTGTCCTTGACTGCCTTTGTTGTGCTTTCCCGCGTAAGATAGCACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR TCA 90 bp ACACAGTGCTATCTTACGCGGGAAAGCACAACAAAGGCAGTCAAGGACAGCTCCATGAAGGACACAAACTaGCATACAGAGTGCCACATA +
Preference number: 2 (lower is better)
Translates to: TQCYLTRESTTKAVKDSSMKDTN*HTECHI
Trigger: TATGTGGCACTCTGTATGTCAGTTTGTGTCCTTCAT...GGAGCTGTCCTTGACTGCCTTTGTTGTGCTTTCCCGCGTAAGATAGCACTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR TCA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGACAGCAGGCTTATGGTaGAAAGAAGCCTCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLTAGLW*KEASPS
Trigger: TGAGGGAGAGGCTTCTTTTCACCATAAGCCTGCTGT...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR TCA 90 bp GGACCACTAGGTTTAGGTGACCTGGCTACCTGGAGTCCATCTGAGGAAAGTTTCAATCAAAAACCATTTTaGGGAAGTGGCGTCTCCACA +
Preference number: 2 (lower is better)
Translates to: GPLGLGDLATWSPSEESFNQKPF*GSGVST
Trigger: TGTGGAGACGCCACTTCCTCAAAATGGTTTTTGATT...GAAACTTTCCTCAGATGGACTCCAGGTAGCCAGGTCACCTAAACCTAGTGGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CCA 90 bp GTGCAGAATACAGATCAAGGCCTGGCACTGCTGGTCAGTTTGCCACGCTATATACCCTCAGCAGGCCCATaGTCTGATAAGATAACAAAA +
Preference number: 2 (lower is better)
Translates to: VQNTDQGLALLVSLPRYIPSAGP*SDKITK
Trigger: TTTTGTTATCTTATCAGACCATGGGCCTGCTGAGGG...TATATAGCGTGGCAAACTGACCAGCAGTGCCAGGCCTTGATCTGTATTCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR TCA 90 bp TTTACTACAGGTAAGACAGGTAAGAGAAGCTGCAGAGATTCAGGGACTGGCAGATTGTCCAGAGAGATGTaGTGCAGATGGCTAGGTGAT +
Preference number: 2 (lower is better)
Translates to: FTTGKTGKRSCRDSGTGRLSREM*CRWLGD
Trigger: ATCACCTAGCCATCTGCATCACATCTCTCTGGACAA...TCTGCCAGTCCCTGAATCTCTGCAGCTTCTCTTACCTGTCTTACCTGTAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR TCA 90 bp ATTTTGAGGAAGTGGCGTCTCCACAAACACTGTACACCCAGACAACGCGGCATTCTCTGTCCTGTACTCTaGTATGAAAAGAGAGTGCAT +
Preference number: 2 (lower is better)
Translates to: ILRKWRLHKHCTPRQRGILCPVL*YEKRVH
Trigger: ATGCACTCTCTTTTCATATCAGAGTACAGGACAGAG...AATGCCGCGTTGTCTGGGTGTACAGTGTTTGTGGAGACGCCACTTCCTCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR GCA 90 bp TTTACTACAGGTAAGACAGGTAAGAGAAGCTGCAGAGATTCAGGGACTGGCAGAACGCACTGCAGCAATTaGCTACTGCTTCTGTTAGCA +
Preference number: 2 (lower is better)
Translates to: FTTGKTGKRSCRDSGTGRTHCSN*LLLLLA
Trigger: TGCTAACAGAAGCAGTAGGCAATTGCTGCAGTGCGT...TCTGCCAGTCCCTGAATCTCTGCAGCTTCTCTTACCTGTCTTACCTGTAGTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CCA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGGAAGTGGCGCCAACATaGAGGAACGAGCAAAGAATT +
Preference number: 2 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLEVAPT*RNEQRI
Trigger: AATTCTTTGCTCGTTCCTCCATGTTGGCGCCACTTC...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CAA 90 bp ATGGAATTATCTGGGGACTTCACAGGCTTCTGGTTACTGGGCCCATaGGTCTCTTCTTTACCATGTTCTGCCTCCCATTCTTGTAAAACT +
Preference number: 2 (lower is better)
Translates to: MELSGDFTGFWLLGP*VSSLPCSASHSCKT
Trigger: AGTTTTACAAGAATGGGAGGCAGAACATGGTAAAGAAGAGACCAATGGGCCCAGTAACCAGAAGCCTGTGAAGTCCCCAGATAATTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560472.1
3UTR-3UTR GCA 90 bp ACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTGCCAACACTAATGTAATTGATAACCATGGTTaGCAAAAGGAGAAGGCACCA +
Preference number: 2 (lower is better)
Translates to: TTRHLCYTSTRLCANTNVIDNHG*QKEKAP
Trigger: TGGTGCCTTCTCCTTTTGGCAACCATGGTTATCAAT...TACATTAGTGTTGGCACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR GCA 90 bp ATTTTGAGGAAGTGGCGTCTCCACAAACACTGTACACCCAGACAACGCGGCATTAGAATGGATCACTGTTaGAGACCAGTCAACACAATA +
Preference number: 2 (lower is better)
Translates to: ILRKWRLHKHCTPRQRGIRMDHC*RPVNTI
Trigger: TATTGTGTTGACTGGTCTGCAACAGTGATCCATTCT...AATGCCGCGTTGTCTGGGTGTACAGTGTTTGTGGAGACGCCACTTCCTCAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CCA 90 bp AAGCTGCAGAGATTCAGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTGGTTATGATGCAGTCTaGCAATATATATTAGTTTCC +
Preference number: 2 (lower is better)
Translates to: KLQRFRDWQKEHRTGPLGGYDAV*QYILVS
Trigger: GGAAACTAATATATATTGCCAGACTGCATCATAACC...ACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCTGAATCTCTGCAGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CCA 90 bp TTCAAAGCCACCAGTTTCTCAGGAGGCAGATGCATATCTGACATCCAGAACAGGCTTAATGGAATTATCTaGGGACTTCACAGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: FKATSFSGGRCISDIQNRLNGII*GLHRLL
Trigger: CAGAAGCCTGTGAAGTCCCCAGATAATTCCATTAAG...CCTGTTCTGGATGTCAGATATGCATCTGCCTCCTGAGAAACTGGTGGCTTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560472.1
3UTR-3UTR TCA 90 bp TTTACTACAGGTAAGACAGGTAAGAGAAGCTGCAGAGATTCAGGGACTGGCAGAATGCAGATGGCTAGGTaGTGTCTCATAATACCTGAT +
Preference number: 2 (lower is better)
Translates to: FTTGKTGKRSCRDSGTGRMQMAR*CLIIPD
Trigger: ATCAGGTATTATGAGACATCACCTAGCCATCTGCAT...TCTGCCAGTCCCTGAATCTCTGCAGCTTCTCTTACCTGTCTTACCTGTAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR TCA 90 bp TTTACTACAGGTAAGACAGGTAAGAGAAGCTGCAGAGATTCAGGGACTGGCAGATCCTGTACTCTGATATaGAAAGAGAGTGCATGGTGT +
Preference number: 2 (lower is better)
Translates to: FTTGKTGKRSCRDSGTGRSCTLI*KESAWC
Trigger: ACACCATGCACTCTCTTTTCATATCAGAGTACAGGA...TCTGCCAGTCCCTGAATCTCTGCAGCTTCTCTTACCTGTCTTACCTGTAGTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CCA 90 bp ACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTGCCAACACTAATGTAAGCTATATTACAGAATaGATCACTGTTGCAGACCAG +
Preference number: 2 (lower is better)
Translates to: TTRHLCYTSTRLCANTNVSYITE*ITVADQ
Trigger: CTGGTCTGCAACAGTGATCCATTCTGTAATATAGCT...TACATTAGTGTTGGCACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CCA 90 bp ATTTTGAGGAAGTGGCGTCTCCACAAACACTGTACACCCAGACAACGCGGCATTGTATTATCACTTAGGTaGTTGTCTCAGAAAAGAACA +
Preference number: 2 (lower is better)
Translates to: ILRKWRLHKHCTPRQRGIVLSLR*LSQKRT
Trigger: TGTTCTTTTCTGAGACAACCACCTAAGTGATAATAC...AATGCCGCGTTGTCTGGGTGTACAGTGTTTGTGGAGACGCCACTTCCTCAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR TCA 90 bp CTTGTTCCCAGTCCAACCAAAAGGCATTACAGACCACTCTGTAGGTTATTTCTTATGTTTAGGGAAATGTaGGTTGCATCAGGATGCTTG +
Preference number: 2 (lower is better)
Translates to: LVPSPTKRHYRPLCRLFLMFREM*VASGCL
Trigger: CAAGCATCCTGATGCAACTCACATTTCCCTAAACAT...AAGAAATAACCTACAGAGTGGTCTGTAATGCCTTTTGGTTGGACTGGGAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR TCA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGTACTTTCCTTTTGAATaGCCTTTCTCTCCAGACTAT +
Preference number: 2 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLYFPFE*PFSPDY
Trigger: ATAGTCTGGAGAGAAAGGTCATTCAAAAGGAAAGTA...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR TCA 90 bp TGTTCAAAGCCACCAGTTTCTCAGGAGGCAGATGCATATCTGACATCCAGAACAAAACTTCATCTATGTTaGAGCGGCGTCGATAATTTA +
Preference number: 2 (lower is better)
Translates to: CSKPPVSQEADAYLTSRTKLHLC*SGVDNL
Trigger: TAAATTATCGACGCCGCTTCAACATAGATGAAGTTT...TGTTCTGGATGTCAGATATGCATCTGCCTCCTGAGAAACTGGTGGCTTTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560472.1
3UTR-3UTR CCA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGTTGCATCAGGATGCTTaGCATGATAAAGGTTATGAT +
Preference number: 2 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLLHQDA*HDKGYD
Trigger: ATCATAACCTTTATCATGCCAAGCATCCTGATGCAA...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CAA 90 bp CAATTTATAAATCATAACTGTACCCCATGTTTAGGGAAATGTGAGTaGCATCAGGATGCTTGGCATGATAAAGGTTATGATGCAGTCTGG +
Preference number: 2 (lower is better)
Translates to: QFINHNCTPCLGKCE*HQDAWHDKGYDAVW
Trigger: CCAGACTGCATCATAACCTTTATCATGCCAAGCATCCTGATGCAACTCACATTTCCCTAAACATGGGGTACAGTTATGATTTATAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CAA 90 bp CTTAGCTCACATAAAAGCAGGGATCCAGTTAGCGTAATGCACTGTTaGGCTTATTTTTGGTGTGCAATTATACCAATAGTACATCTGATA +
Preference number: 2 (lower is better)
Translates to: LSSHKSRDPVSVMHC*AYFWCAIIPIVHLI
Trigger: TATCAGATGTACTATTGGTATAATTGCACACCAAAAATAAGCCAAACAGTGCATTACGCTAACTGGATCCCTGCTTTTATGTGAGCTAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CCA 72 bp GCTCTGAAGCTGCTGACTGGGAAGAGCTGCCATTGGTaGGGCTCGGGGGCTCCGGCGGGAGAGGCGGTTCCC +
Preference number: 3 (lower is better)
Translates to: ALKLLTGKSCHW*GSGAPAGEAVP
Trigger: GGGAACCGCCTCTCCCGCCGGAGCCCCCGAGCCCCACCAATGGCAGCTCTTCCCAGTCAGCAGCTTCAGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR GCA 72 bp CGTGAGACTTCCCCAGCACGTGGGCAGAGTGTGAGATaGAGTGGAGCTCTCTGGGAAGTGGCGCCAACATGG +
Preference number: 3 (lower is better)
Translates to: RETSPARGQSVR*SGALWEVAPTW
Trigger: CCATGTTGGCGCCACTTCCCAGAGAGCTCCACTGCATCTCACACTCTGCCCACGTGCTGGGGAAGTCTCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR GCA 72 bp TGCAGGAACAGAGTCGGGCCTTCCAAGGAGACTGCCTaGTCTGAAGCTGCTGACTGGGAAGAGCTGCCATTG +
Preference number: 3 (lower is better)
Translates to: CRNRVGPSKETA*SEAADWEELPL
Trigger: CAATGGCAGCTCTTCCCAGTCAGCAGCTTCAGAGCAGGCAGTCTCCTTGGAAGGCCCGACTCTGTTCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR TCA 72 bp CCTTCCTCTCGGGGAGAAAGCCCAGGTCAGCTGCTGTaGTCACACGTGATTCTTCAGGGCTGGAGACCATTC +
Preference number: 3 (lower is better)
Translates to: PSSRGESPGQLL*SHVILQGWRPF
Trigger: GAATGGTCTCCAGCCCTGAAGAATCACGTGTGATCACAGCAGCTGACCTGGGCTTTCTCCCCGAGAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR TCA 72 bp CTGTCTCCAGGTAGCAGCAGCAATCCGGGACTCCTCTaGTGCTTCCCAGGCTTTTACGTGACCAACACACAC +
Preference number: 3 (lower is better)
Translates to: LSPGSSSNPGLL*CFPGFYVTNTH
Trigger: GTGTGTGTTGGTCACGTAAAAGCCTGGGAAGCATCAGAGGAGTCCCGGATTGCTGCTGCTACCTGGAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CAA 90 bp AAGCTGCAGAGATTCAGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTAGCAAGAAGGAGGTCTaGAGGGAAGCACGGAGAACC +
Preference number: 3 (lower is better)
Translates to: KLQRFRDWQKEHRTGPLGSKKEV*REARRT
Trigger: GGTTCTCCGTGCTTCCCTCAAGACCTCCTTCTTGCT...ACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCTGAATCTCTGCAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR TCA 72 bp CAAAGCCACCAGTTTCTCAGGAGGCAGATGCATATCTaGCATCCAGAACAGGAGCCTCGTCTTCCTCTTCGG +
Preference number: 3 (lower is better)
Translates to: QSHQFLRRQMHI*HPEQEPRLPLR
Trigger: CCGAAGAGGAAGACGAGGCTCCTGTTCTGGATGTCAGATATGCATCTGCCTCCTGAGAAACTGGTGGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560472.1
3UTR TCA 72 bp CTCCTGCCGCCCTCGGTGTACACAGCAGGCTTATGGTaGAAAGAAGCCTCTCCCTCATCACTAGTGTTATTT +
Preference number: 3 (lower is better)
Translates to: LLPPSVYTAGLW*KEASPSSLVLF
Trigger: AAATAACACTAGTGATGAGGGAGAGGCTTCTTTTCACCATAAGCCTGCTGTGTACACCGAGGGCGGCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CAA 90 bp TTTACTACAGGTAAGACAGGTAAGAGAAGCTGCAGAGATTCAGGGACTGGCAGACAGACAACGCGGCATTaGTGTTACACTAGCACCCGA +
Preference number: 3 (lower is better)
Translates to: FTTGKTGKRSCRDSGTGRQTTRH*CYTSTR
Trigger: TCGGGTGCTAGTGTAACACAAATGCCGCGTTGTCTG...TCTGCCAGTCCCTGAATCTCTGCAGCTTCTCTTACCTGTCTTACCTGTAGTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR TCA 72 bp AACAACAAAAGCGACTTCAGCGTATTGAGTGCAGTCTaGATGGCCGTGGGGTGGGAACAGGGTATGTTAGAA +
Preference number: 3 (lower is better)
Translates to: NNKSDFSVLSAV*MAVGWEQGMLE
Trigger: TTCTAACATACCCTGTTCCCACCCCACGGCCATTCAGACTGCACTCAATACGCTGAAGTCGCTTTTGTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR TCA 72 bp ACAACATGCATAGCCTCTGCTGACCTTCCCTTCTTCTaGATGCGACGCCACTGCAATTGTGCTTTACTACAG +
Preference number: 3 (lower is better)
Translates to: TTCIASADLPFF*MRRHCNCALLQ
Trigger: CTGTAGTAAAGCACAATTGCAGTGGCGTCGCATTCAGAAGAAGGGAAGGTCAGCAGAGGCTATGCATGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR GCA 72 bp CCTTCCCTTCTTCTGAATGCGACGCCACTGCAATTGTaGTTTACTACAGGTAAGACAGGTAAGAGAAGCTGC +
Preference number: 3 (lower is better)
Translates to: PSLLLNATPLQL*FTTGKTGKRSC
Trigger: GCAGCTTCTCTTACCTGTCTTACCTGTAGTAAAGCACAATTGCAGTGGCGTCGCATTCAGAAGAAGGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CCA 72 bp GCTAGACAAGAGAGAAAAAGAGGCCCTCGTTGGAGTTaGCTCCATCTTTCCTTAGCTCACATAAAAGCAGGG +
Preference number: 3 (lower is better)
Translates to: ARQERKRGPRWS*LHLSLAHIKAG
Trigger: CCCTGCTTTTATGTGAGCTAAGGAAAGATGGAGCCAACTCCAACGAGGGCCTCTTTTTCTCTCTTGTCTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CCA 72 bp TGGAATTATCTGGGGACTTCACAGGCTTCTGGTTACTaGGCCCATTGGTCTCTTCTTTACCATGTTCTGCCT +
Preference number: 3 (lower is better)
Translates to: WNYLGTSQASGY*AHWSLLYHVLP
Trigger: AGGCAGAACATGGTAAAGAAGAGACCAATGGGCCCAGTAACCAGAAGCCTGTGAAGTCCCCAGATAATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560472.1
3UTR-3UTR CAA 90 bp GGACCACTAGGTTTAGGTGACCTGGCTACCTGGAGTCCATCTGAGGAAAGTTTCAGCGTAATGCACTGTTaGGCTTATTTTTGGTGTGCA +
Preference number: 3 (lower is better)
Translates to: GPLGLGDLATWSPSEESFSVMHC*AYFWCA
Trigger: TGCACACCAAAAATAAGCCAAACAGTGCATTACGCT...GAAACTTTCCTCAGATGGACTCCAGGTAGCCAGGTCACCTAAACCTAGTGGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CAA 90 bp GGACCACTAGGTTTAGGTGACCTGGCTACCTGGAGTCCATCTGAGGAAAGTTTCCTTGACAATAGAAGCTaGAATCCTGGATCATTCGGT +
Preference number: 3 (lower is better)
Translates to: GPLGLGDLATWSPSEESFLDNRS*NPGSFG
Trigger: ACCGAATGATCCAGGATTCAAGCTTCTATTGTCAAG...GAAACTTTCCTCAGATGGACTCCAGGTAGCCAGGTCACCTAAACCTAGTGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CAA 90 bp AAGCTGCAGAGATTCAGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTAAGTATATGCCTTTTTaGGTAATAGCTGCTTGTCCA +
Preference number: 3 (lower is better)
Translates to: KLQRFRDWQKEHRTGPLGKYMPF*VIAACP
Trigger: TGGACAAGCAGCTATTACCAAAAAAGGCATATACTT...ACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCTGAATCTCTGCAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CAA 90 bp ATTTTGAGGAAGTGGCGTCTCCACAAACACTGTACACCCAGACAACGCGGCATTATCACTAGTGTTATTTaGCTAACCCTGTCTCCAGGT +
Preference number: 3 (lower is better)
Translates to: ILRKWRLHKHCTPRQRGIITSVI*LTLSPG
Trigger: ACCTGGAGACAGGGTTAGCAAAATAACACTAGTGAT...AATGCCGCGTTGTCTGGGTGTACAGTGTTTGTGGAGACGCCACTTCCTCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR GCA 72 bp ATCACACGTGATTCTTCAGGGCTGGAGACCATTCAGTaGCAGGAACCAAGTAAAGGGATAGTGCAGAATACA +
Preference number: 3 (lower is better)
Translates to: ITRDSSGLETIQ*QEPSKGIVQNT
Trigger: TGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAATGGTCTCCAGCCCTGAAGAATCACGTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CAA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGGAGAGTGCATGGTGTTaGTGTAATCACATCAGCACA +
Preference number: 3 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLESAWC*CNHIST
Trigger: TGTGCTGATGTGATTACACAAACACCATGCACTCTC...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR TCA 72 bp CTGCTTGTCCAGAGAGATGTGATGCAGATGGCTAGGTaGTGTCTCATAATACCTGATATCCCGGATAACACA +
Preference number: 3 (lower is better)
Translates to: LLVQRDVMQMAR*CLIIPDIPDNT
Trigger: TGTGTTATCCGGGATATCAGGTATTATGAGACATCACCTAGCCATCTGCATCACATCTCTCTGGACAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CCA 72 bp AAACAGGCTAGACAAGAGAGAAAAAGAGGCCCTCGTTaGAGTTGGCTCCATCTTTCCTTAGCTCACATAAAA +
Preference number: 3 (lower is better)
Translates to: KQARQERKRGPR*SWLHLSLAHIK
Trigger: TTTTATGTGAGCTAAGGAAAGATGGAGCCAACTCCAACGAGGGCCTCTTTTTCTCTCTTGTCTAGCCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CAA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGCATTGTACTTTCCTTTaGAATGACCTTTCTCTCCAG +
Preference number: 3 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLHCTFL*NDLSLQ
Trigger: CTGGAGAGAAAGGTCATTCAAAAGGAAAGTACAATG...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR GCA 72 bp TGCAAAGACAGTGTAATGCAACAGTTTAAAACACAGTaGTATCTTACGCGGGAAAGCACAACAAAGGCAGTC +
Preference number: 3 (lower is better)
Translates to: CKDSVMQQFKTQ*YLTRESTTKAV
Trigger: GACTGCCTTTGTTGTGCTTTCCCGCGTAAGATAGCACTGTGTTTTAAACTGTTGCATTACACTGTCTTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR-3UTR CAA 90 bp CTTGTTCCCAGTCCAACCAAAAGGCATTACAGACCACTCTGTAGGTTATTTCTTCACAATGCTGAAAAGTaGAAGGCAGAAAGCATTGAG +
Preference number: 3 (lower is better)
Translates to: LVPSPTKRHYRPLCRLFLHNAEK*KAESIE
Trigger: CTCAATGCTTTCTGCCTTCAACTTTTCAGCATTGTG...AAGAAATAACCTACAGAGTGGTCTGTAATGCCTTTTGGTTGGACTGGGAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CCA 72 bp GATCCAGTTAGCGTAATGCACTGTTTGGCTTATTTTTaGTGTGCAATTATACCAATAGTACATCTGATATTT +
Preference number: 3 (lower is better)
Translates to: DPVSVMHCLAYF*CAIIPIVHLIF
Trigger: AAATATCAGATGTACTATTGGTATAATTGCACACCAAAAATAAGCCAAACAGTGCATTACGCTAACTGGATC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp CCAGGCACACCGAGAGAACGCGGAACAACGCGCAGCTTTCATAAACCAGCGCCAAGTTGCTGCTGCTGTTaGCATTGGGCGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: PGTPRERGTTRSFHKPAPSCCCC*HWAPPP
Trigger: CGGCGGCGGCGCCCAATGGCAACAGCAGCAGCAACT...TGGCGCTGGTTTATGAAAGCTGCGCGTTGTTCCGCGTTCTCTCGGTGTGCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp CCAGGCACACCGAGAGAACGCGGAACAACGCGCAGCTTTCATAAACCAGCGCCACCCAGGAGTTGCTGCTaGTGTTGCCATTGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: PGTPRERGTTRSFHKPAPPRSCC*CCHWAP
Trigger: CGGCGCCCAATGGCAACAGCAGCAGCAACTCCTGGG...TGGCGCTGGTTTATGAAAGCTGCGCGTTGTTCCGCGTTCTCTCGGTGTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp CCAGGCACACCGAGAGAACGCGGAACAACGCGCAGCTTTCATAAACCAGCGCCACCTCCCAGGAGTTGCTaGTGCTGTTGCCATTGGGCG +
Preference number: 4 (lower is better)
Translates to: PGTPRERGTTRSFHKPAPPPRSC*CCCHWA
Trigger: CGCCCAATGGCAACAGCAGCAGCAACTCCTGGGAGG...TGGCGCTGGTTTATGAAAGCTGCGCGTTGTTCCGCGTTCTCTCGGTGTGCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp AAGCTGCAGAGATTCAGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTATGCCACCGCCACCGTaGTCCTCGTCGCTGGACGAG +
Preference number: 4 (lower is better)
Translates to: KLQRFRDWQKEHRTGPLGMPPPP*SSSLDE
Trigger: CTCGTCCAGCGACGAGGAGCACGGTGGCGGTGGCAT...ACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCTGAATCTCTGCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp AAGCTGCAGAGATTCAGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTCGTGCTCCTCGTCGCTaGACGAGCCCGAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: KLQRFRDWQKEHRTGPLGRAPRR*TSPSCL
Trigger: AAGGCAGCTCGGGCTCGTCCAGCGACGAGGAGCACG...ACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCTGAATCTCTGCAGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGGGGGCCGTGCGAAAGTaGCGGGGACCCGCGGCTCCT +
Preference number: 4 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLGAVRK*RGPAAP
Trigger: AGGAGCCGCGGGTCCCCGCCACTTTCGCACGGCCCC...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp ACACAGTGCTATCTTACGCGGGAAAGCACAACAAAGGCAGTCAAGGACAGCTCCTGCTGCTGTTGCCATTaGGCGCCGCCGCCGCCAAAC +
Preference number: 4 (lower is better)
Translates to: TQCYLTRESTTKAVKDSSCCCCH*APPPPN
Trigger: GTTTGGCGGCGGCGGCGCCCAATGGCAACAGCAGCA...GGAGCTGTCCTTGACTGCCTTTGTTGTGCTTTCCCGCGTAAGATAGCACTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp AAGCTGCAGAGATTCAGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTTGCGTCTTGCCAGTTTaGCGGGGTCGAAGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: KLQRFRDWQKEHRTGPLGCVLPV*RGRSRA
Trigger: TGCCCGACTTCGACCCCGCCAAACTGGCAAGACGCA...ACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCTGAATCTCTGCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp AGGCCATGCAGGAACAGAGTCGGGCCTTCCAAGGAGACTGCCTGCTCTGAAGCTGGCCCTCGTTGGAGTTaGCTCCATCTTTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: RPCRNRVGPSKETACSEAGPRWS*LHLSLA
Trigger: AGCTAAGGAAAGATGGAGCCAACTCCAACGAGGGCC...AGCTTCAGAGCAGGCAGTCTCCTTGGAAGGCCCGACTCTGTTCCTGCATGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp AGGCCATGCAGGAACAGAGTCGGGCCTTCCAAGGAGACTGCCTGCTCTGAAGCTAGGCAGATGCATATCTaGCATCCAGAACAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RPCRNRVGPSKETACSEARQMHI*HPEQEP
Trigger: AGGCTCCTGTTCTGGATGTCAGATATGCATCTGCCT...AGCTTCAGAGCAGGCAGTCTCCTTGGAAGGCCCGACTCTGTTCCTGCATGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp AGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTTTAGGTGACCTGGCTGTATTGAGTGCAGTCTaGATGGCCGTGGGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: RDWQKEHRTGPLGLGDLAVLSAV*MAVGWE
Trigger: TTCCCACCCCACGGCCATTCAGACTGCACTCAATAC...AGCCAGGTCACCTAAACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp CCAGGCACACCGAGAGAACGCGGAACAACGCGCAGCTTTCATAAACCAGCGCCATGTGCAAACTTAGGCTaGCTCCTTCCCATGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PGTPRERGTTRSFHKPAPCANLG*LLPMLL
Trigger: GAGAAGCATGGGAAGGAGTCAGCCTAAGTTTGCACA...TGGCGCTGGTTTATGAAAGCTGCGCGTTGTTCCGCGTTCTCTCGGTGTGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp AGGCCATGCAGGAACAGAGTCGGGCCTTCCAAGGAGACTGCCTGCTCTGAAGCTTGTACGGCGAGAAGCTaGTCTTCTGTAGTCCAACGT +
Preference number: 4 (lower is better)
Translates to: RPCRNRVGPSKETACSEACTARS*SSVVQR
Trigger: ACGTTGGACTACAGAAGAGCAGCTTCTCGCCGTACA...AGCTTCAGAGCAGGCAGTCTCCTTGGAAGGCCCGACTCTGTTCCTGCATGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp AGGCCATGCAGGAACAGAGTCGGGCCTTCCAAGGAGACTGCCTGCTCTGAAGCTGCCAAACTTTTATTCTaGCCATTATTGGGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: RPCRNRVGPSKETACSEAAKLLF*PLLGAA
Trigger: CGCCGCCCCCAATAATGGCCAGAATAAAAGTTTGGC...AGCTTCAGAGCAGGCAGTCTCCTTGGAAGGCCCGACTCTGTTCCTGCATGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp AGGTCAGCTGCTGTGATCACACGTGATTCTTCAGGGCTGGAGACCATTCAGTGCTGCAGTGGAGCTCTCTaGGAAGTGGCGCCAACATGG +
Preference number: 4 (lower is better)
Translates to: RSAAVITRDSSGLETIQCCSGAL*EVAPTW
Trigger: CCATGTTGGCGCCACTTCCCAGAGAGCTCCACTGCA...GCACTGAATGGTCTCCAGCCCTGAAGAATCACGTGTGATCACAGCAGCTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp GCTCAACCCTCAGCAGGCCCATGGTCTGATAAGATAACAAAAGTGATTCTGGAAAAGAGCTGCCATTGGTaGGGCTCGGGGGCTCCGGCG +
Preference number: 4 (lower is better)
Translates to: AQPSAGPWSDKITKVILEKSCHW*GSGAPA
Trigger: CGCCGGAGCCCCCGAGCCCCACCAATGGCAGCTCTT...TTCCAGAATCACTTTTGTTATCTTATCAGACCATGGGCCTGCTGAGGGTTGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp AGGCCATGCAGGAACAGAGTCGGGCCTTCCAAGGAGACTGCCTGCTCTGAAGCTAAAGCCACTGTTTTATaGGTCCACCCCAGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: RPCRNRVGPSKETACSEAKATVL*VHPSKL
Trigger: CAGCTTACTGGGGTGGACTCATAAAACAGTGGCTTT...AGCTTCAGAGCAGGCAGTCTCCTTGGAAGGCCCGACTCTGTTCCTGCATGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp AGGTCAGCTGCTGTGATCACACGTGATTCTTCAGGGCTGGAGACCATTCAGTGCGGGCAGAGTGTGAGATaGAGTGGAGCTCTCTGGGAA +
Preference number: 4 (lower is better)
Translates to: RSAAVITRDSSGLETIQCGQSVR*SGALWE
Trigger: TTCCCAGAGAGCTCCACTGCATCTCACACTCTGCCC...GCACTGAATGGTCTCCAGCCCTGAAGAATCACGTGTGATCACAGCAGCTGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp ACACTGTACACCCAGACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTTTCCCATGCTTCTCCTaGCGCCCTCGGTGTACACAG +
Preference number: 4 (lower is better)
Translates to: TLYTQTTRHLCYTSTRLCFPCFS*RPRCTQ
Trigger: CTGTGTACACCGAGGGCGGCAGGAGAAGCATGGGAA...ACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGTCTGGGTGTACAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp GGACCACTAGGTTTAGGTGACCTGGCTACCTGGAGTCCATCTGAGGAAAGTTTCGACTTCCCCAGCACGTaGGCAGAGTGTGAGATGCAG +
Preference number: 4 (lower is better)
Translates to: GPLGLGDLATWSPSEESFDFPST*AECEMQ
Trigger: CTGCATCTCACACTCTGCCCACGTGCTGGGGAAGTC...GAAACTTTCCTCAGATGGACTCCAGGTAGCCAGGTCACCTAAACCTAGTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp AGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTTTAGGTGACCTGGCTGTGATTCTTCAGGGCTaGAGACCATTCAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RDWQKEHRTGPLGLGDLAVILQG*RPFSAR
Trigger: CCTGGCACTGAATGGTCTCCAGCCCTGAAGAATCAC...AGCCAGGTCACCTAAACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp ACACTGTACACCCAGACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTAAGCACCAGGTACAGTaGTGTGGGCCGAACCTCTTG +
Preference number: 4 (lower is better)
Translates to: TLYTQTTRHLCYTSTRLCKHQVQ*CGPNLL
Trigger: CAAGAGGTTCGGCCCACATCACTGTACCTGGTGCTT...ACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGTCTGGGTGTACAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp AGGTCAGCTGCTGTGATCACACGTGATTCTTCAGGGCTGGAGACCATTCAGTGCCCAGGTCAGCTGCTGTaGTCACACGTGATTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RSAAVITRDSSGLETIQCPGQLL*SHVILQ
Trigger: CTGAAGAATCACGTGTGATCACAGCAGCTGACCTGG...GCACTGAATGGTCTCCAGCCCTGAAGAATCACGTGTGATCACAGCAGCTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp GGACCACTAGGTTTAGGTGACCTGGCTACCTGGAGTCCATCTGAGGAAAGTTTCACCACTAGGTTTAGGTaGCCTGGCTACCTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: GPLGLGDLATWSPSEESFTTRFR*PGYLES
Trigger: GGACTCCAGGTAGCCAGGTCACCTAAACCTAGTGGT...GAAACTTTCCTCAGATGGACTCCAGGTAGCCAGGTCACCTAAACCTAGTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp AAGCTGCAGAGATTCAGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTTTCTTGACTGCGTCTTaGCAGTTTGGCGGGGTCGAA +
Preference number: 4 (lower is better)
Translates to: KLQRFRDWQKEHRTGPLGFLTAS*QFGGVE
Trigger: TTCGACCCCGCCAAACTGGCAAGACGCAGTCAAGAA...ACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCTGAATCTCTGCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp AGGCCATGCAGGAACAGAGTCGGGCCTTCCAAGGAGACTGCCTGCTCTGAAGCTTTCTCAGGAGGCAGATaGATATCTGACATCCAGAAC +
Preference number: 4 (lower is better)
Translates to: RPCRNRVGPSKETACSEAFSGGR*ISDIQN
Trigger: GTTCTGGATGTCAGATATGCATCTGCCTCCTGAGAA...AGCTTCAGAGCAGGCAGTCTCCTTGGAAGGCCCGACTCTGTTCCTGCATGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp ACACTGTACACCCAGACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTTCCAAGGAGACTGCCTaGTCTGAAGCTGCTGACTGG +
Preference number: 4 (lower is better)
Translates to: TLYTQTTRHLCYTSTRLCSKETA*SEAADW
Trigger: CCAGTCAGCAGCTTCAGAGCAGGCAGTCTCCTTGGA...ACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGTCTGGGTGTACAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp GGACCACTAGGTTTAGGTGACCTGGCTACCTGGAGTCCATCTGAGGAAAGTTTCAGAAACTGCAGGCCATaGAGGAACAGAGTCGGGCCT +
Preference number: 4 (lower is better)
Translates to: GPLGLGDLATWSPSEESFRNCRP*RNRVGP
Trigger: AGGCCCGACTCTGTTCCTGCATGGCCTGCAGTTTCT...GAAACTTTCCTCAGATGGACTCCAGGTAGCCAGGTCACCTAAACCTAGTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp AAGCTGCAGAGATTCAGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTCTTCAGCGTATTGAGTaGAGTCTGAATGGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: KLQRFRDWQKEHRTGPLGLQRIE*SLNGRG
Trigger: CCCACGGCCATTCAGACTGCACTCAATACGCTGAAG...ACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCTGAATCTCTGCAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp AAGCTGCAGAGATTCAGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTGACTTCACAGGCTTCTaGTTACTGGGCCCATTGGTC +
Preference number: 4 (lower is better)
Translates to: KLQRFRDWQKEHRTGPLGDFTGF*LLGPLV
Trigger: GACCAATGGGCCCAGTAACCAGAAGCCTGTGAAGTC...ACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCTGAATCTCTGCAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp ACACAGTGCTATCTTACGCGGGAAAGCACAACAAAGGCAGTCAAGGACAGCTCCGGGTGGCAACCACCCTaGGGTCACAATGCTGAAAAG +
Preference number: 4 (lower is better)
Translates to: TQCYLTRESTTKAVKDSSGWQPP*GHNAEK
Trigger: CTTTTCAGCATTGTGACCCCAGGGTGGTTGCCACCC...GGAGCTGTCCTTGACTGCCTTTGTTGTGCTTTCCCGCGTAAGATAGCACTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp CAGGAGGCAGATGCATATCTGACATCCAGAACAGGAGCCTCGTCTTCCTCTTCGAGGCAGATGCATATCTaGCATCCAGAACAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: QEADAYLTSRTGASSSSSRQMHI*HPEQEP
Trigger: AGGCTCCTGTTCTGGATGTCAGATATGCATCTGCCT...CGAAGAGGAAGACGAGGCTCCTGTTCTGGATGTCAGATATGCATCTGCCTCCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560472.1
CDS-3UTR TCA 90 bp AGGCCATGCAGGAACAGAGTCGGGCCTTCCAAGGAGACTGCCTGCTCTGAAGCTTCCTGTACTCTGATATaGAAAGAGAGTGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: RPCRNRVGPSKETACSEASCTLI*KESAWC
Trigger: ACACCATGCACTCTCTTTTCATATCAGAGTACAGGA...AGCTTCAGAGCAGGCAGTCTCCTTGGAAGGCCCGACTCTGTTCCTGCATGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp ACACTGTACACCCAGACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTAATCCGGGACTCCTCTaGTGCTTCCCAGGCTTTTAC +
Preference number: 4 (lower is better)
Translates to: TLYTQTTRHLCYTSTRLCNPGLL*CFPGFY
Trigger: GTAAAAGCCTGGGAAGCATCAGAGGAGTCCCGGATT...ACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGTCTGGGTGTACAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp AGGCCATGCAGGAACAGAGTCGGGCCTTCCAAGGAGACTGCCTGCTCTGAAGCTAATCAAAAACCATTTTaGGGAAGTGGCGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: RPCRNRVGPSKETACSEANQKPF*GSGVST
Trigger: TGTGGAGACGCCACTTCCTCAAAATGGTTTTTGATT...AGCTTCAGAGCAGGCAGTCTCCTTGGAAGGCCCGACTCTGTTCCTGCATGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp AGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTTTAGGTGACCTGGCTTTCCCTTCTTCTGAATaGGACGCCACTGCAATTGTG +
Preference number: 4 (lower is better)
Translates to: RDWQKEHRTGPLGLGDLAFPSSE*DATAIV
Trigger: CACAATTGCAGTGGCGTCGCATTCAGAAGAAGGGAA...AGCCAGGTCACCTAAACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp ATTTTGAGGAAGTGGCGTCTCCACAAACACTGTACACCCAGACAACGCGGCATTGAGTGTGAGATGCAGTaGAGCTCTCTGGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: ILRKWRLHKHCTPRQRGIECEMQ*SSLGSG
Trigger: GCCACTTCCCAGAGAGCTCCACTGCATCTCACACTC...AATGCCGCGTTGTCTGGGTGTACAGTGTTTGTGGAGACGCCACTTCCTCAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp GTGCAGAATACAGATCAAGGCCTGGCACTGCTGGTCAGTTTGCCACGCTATATACCAGGTACAGTGATGTaGGCCGAACCTCTTGGAGGT +
Preference number: 4 (lower is better)
Translates to: VQNTDQGLALLVSLPRYIPGTVM*AEPLGG
Trigger: ACCTCCAAGAGGTTCGGCCCACATCACTGTACCTGG...TATATAGCGTGGCAAACTGACCAGCAGTGCCAGGCCTTGATCTGTATTCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp GGACCACTAGGTTTAGGTGACCTGGCTACCTGGAGTCCATCTGAGGAAAGTTTCAAGGCCTGGCACTGCTaGTCAGTTTGCCACGCTATA +
Preference number: 4 (lower is better)
Translates to: GPLGLGDLATWSPSEESFKAWHC*SVCHAI
Trigger: TATAGCGTGGCAAACTGACCAGCAGTGCCAGGCCTT...GAAACTTTCCTCAGATGGACTCCAGGTAGCCAGGTCACCTAAACCTAGTGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp AGGTCAGCTGCTGTGATCACACGTGATTCTTCAGGGCTGGAGACCATTCAGTGCCAGAGATTCAGGGACTaGCAGAAAGAGCATCGCACA +
Preference number: 4 (lower is better)
Translates to: RSAAVITRDSSGLETIQCQRFRD*QKEHRT
Trigger: TGTGCGATGCTCTTTCTGCCAGTCCCTGAATCTCTG...GCACTGAATGGTCTCCAGCCCTGAAGAATCACGTGTGATCACAGCAGCTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp AGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTTTAGGTGACCTGGCTCGTGCATTACATTTCTaGATGACCTCTGGAAGTCGA +
Preference number: 4 (lower is better)
Translates to: RDWQKEHRTGPLGLGDLARALHF*MTSGSR
Trigger: TCGACTTCCAGAGGTCATTCAGAAATGTAATGCACG...AGCCAGGTCACCTAAACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp ACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTGCCAACACTAATGTAGCAAGAAGGAGGTCTTaGGGGAAGCACGGAGAACCT +
Preference number: 4 (lower is better)
Translates to: TTRHLCYTSTRLCANTNVARRRS*GKHGEP
Trigger: AGGTTCTCCGTGCTTCCCTCAAGACCTCCTTCTTGC...TACATTAGTGTTGGCACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp GTGCAGAATACAGATCAAGGCCTGGCACTGCTGGTCAGTTTGCCACGCTATATAGACCTTCCCTTCTTCTaGATGCGACGCCACTGCAAT +
Preference number: 4 (lower is better)
Translates to: VQNTDQGLALLVSLPRYIDLPFF*MRRHCN
Trigger: ATTGCAGTGGCGTCGCATTCAGAAGAAGGGAAGGTC...TATATAGCGTGGCAAACTGACCAGCAGTGCCAGGCCTTGATCTGTATTCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGAGAATGCAGGCTGTCTaGTCAACCCTCAGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLRMQAV*STLSRP
Trigger: GGGCCTGCTGAGGGTTGAGCAGACAGCCTGCATTCT...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp ACACAGTGCTATCTTACGCGGGAAAGCACAACAAAGGCAGTCAAGGACAGCTCCCAGGGTATGTTAGAATaGAGGCTGTCTGCTCAACCC +
Preference number: 4 (lower is better)
Translates to: TQCYLTRESTTKAVKDSSQGMLE*RLSAQP
Trigger: GGGTTGAGCAGACAGCCTGCATTCTAACATACCCTG...GGAGCTGTCCTTGACTGCCTTTGTTGTGCTTTCCCGCGTAAGATAGCACTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp ACACAGTGCTATCTTACGCGGGAAAGCACAACAAAGGCAGTCAAGGACAGCTCCATACAGATCAAGGCCTaGCACTGCTGGTCAGTTTGC +
Preference number: 4 (lower is better)
Translates to: TQCYLTRESTTKAVKDSSIQIKA*HCWSVC
Trigger: GCAAACTGACCAGCAGTGCCAGGCCTTGATCTGTAT...GGAGCTGTCCTTGACTGCCTTTGTTGTGCTTTCCCGCGTAAGATAGCACTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp ATTTTGAGGAAGTGGCGTCTCCACAAACACTGTACACCCAGACAACGCGGCATTTGTAATCGGCACAACTaGGGTGTGGTTCCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ILRKWRLHKHCTPRQRGICNRHN*GVVPSQ
Trigger: CTGGGAAGGAACCACACCCCAGTTGTGCCGATTACA...AATGCCGCGTTGTCTGGGTGTACAGTGTTTGTGGAGACGCCACTTCCTCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CAA 72 bp TCTCCACAAACACTGTACACCCAGACAACGCGGCATTaGTGTTACACTAGCACCCGACTGTGTGCCAACACT +
Preference number: 4 (lower is better)
Translates to: SPQTLYTQTTRH*CYTSTRLCANT
Trigger: AGTGTTGGCACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGTCTGGGTGTACAGTGTTTGTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp AGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTTTAGGTGACCTGGCTTTTCACTTGTACCACTaGTTTGTTCCCAATCACGTC +
Preference number: 4 (lower is better)
Translates to: RDWQKEHRTGPLGLGDLAFHLYH*FVPNHV
Trigger: GACGTGATTGGGAACAAATCAGTGGTACAAGTGAAA...AGCCAGGTCACCTAAACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp ACACAGTGCTATCTTACGCGGGAAAGCACAACAAAGGCAGTCAAGGACAGCTCCTTGTCCAGAGAGATGTaGTGCAGATGGCTAGGTGAT +
Preference number: 4 (lower is better)
Translates to: TQCYLTRESTTKAVKDSSLSREM*CRWLGD
Trigger: ATCACCTAGCCATCTGCATCACATCTCTCTGGACAA...GGAGCTGTCCTTGACTGCCTTTGTTGTGCTTTCCCGCGTAAGATAGCACTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp GGACCACTAGGTTTAGGTGACCTGGCTACCTGGAGTCCATCTGAGGAAAGTTTCCTGGGGTCACAATGCTaGAAAGTTGAAGGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GPLGLGDLATWSPSEESFLGSQC*KVEGRK
Trigger: CTTTCTGCCTTCAACTTTTCAGCATTGTGACCCCAG...GAAACTTTCCTCAGATGGACTCCAGGTAGCCAGGTCACCTAAACCTAGTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp AGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTTTAGGTGACCTGGCTATGAAGGACACAAACTaGCATACAGAGTGCCACATA +
Preference number: 4 (lower is better)
Translates to: RDWQKEHRTGPLGLGDLAMKDTN*HTECHI
Trigger: TATGTGGCACTCTGTATGTCAGTTTGTGTCCTTCAT...AGCCAGGTCACCTAAACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGGCGACTTCAGCGTATTaGGTGCAGTCTGAATGGCCG +
Preference number: 4 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLATSAY*VQSEWP
Trigger: CGGCCATTCAGACTGCACTCAATACGCTGAAGTCGC...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp CCAGGCACACCGAGAGAACGCGGAACAACGCGCAGCTTTCATAAACCAGCGCCATACTTTCCTTTTGAATaGCCTTTCTCTCCAGACTAT +
Preference number: 4 (lower is better)
Translates to: PGTPRERGTTRSFHKPAPYFPFE*PFSPDY
Trigger: ATAGTCTGGAGAGAAAGGTCATTCAAAAGGAAAGTA...TGGCGCTGGTTTATGAAAGCTGCGCGTTGTTCCGCGTTCTCTCGGTGTGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp CCACACCAAGTGTTCAAAGCCACCAGTTTCTCAGGAGGCAGATGCATATCTGACCTCGGCCATATTTCCTaGTGGCTCTGGAAGTCGATA +
Preference number: 4 (lower is better)
Translates to: PHQVFKATSFSGGRCISDLGHIS*WLWKSI
Trigger: TATCGACTTCCAGAGCCATCAGGAAATATGGCCGAG...GTCAGATATGCATCTGCCTCCTGAGAAACTGGTGGCTTTGAACACTTGGTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560472.1
CDS-3UTR CCA 90 bp GACTTCACAGGCTTCTGGTTACTGGGCCCATTGGTCTCTTCTTTACCATGTTCTGACTTCACAGGCTTCTaGTTACTGGGCCCATTGGTC +
Preference number: 4 (lower is better)
Translates to: DFTGFWLLGPLVSSLPCSDFTGF*LLGPLV
Trigger: GACCAATGGGCCCAGTAACCAGAAGCCTGTGAAGTC...AGAACATGGTAAAGAAGAGACCAATGGGCCCAGTAACCAGAAGCCTGTGAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560472.1
CDS-3UTR CCA 90 bp GAGGCAGATGCATATCTGACATCCAGAACAGGAGCCTCGTCTTCCTCTTCGGGCCTTAATGGAATTATCTaGGGACTTCACAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: EADAYLTSRTGASSSSSGLNGII*GLHRLL
Trigger: CAGAAGCCTGTGAAGTCCCCAGATAATTCCATTAAG...GCCCGAAGAGGAAGACGAGGCTCCTGTTCTGGATGTCAGATATGCATCTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560472.1
CDS-3UTR CCA 90 bp CTCATAATACCTGATATCCCGGATAACACAGTAGTCCACACCAAGTGTTCAAAGGGGGTCAGGAAAAGATaGGGTGGCAACCACCCTGGG +
Preference number: 4 (lower is better)
Translates to: LIIPDIPDNTVVHTKCSKGVRKR*GGNHPG
Trigger: CCCAGGGTGGTTGCCACCCCATCTTTTCCTGACCCC...CTTTGAACACTTGGTGTGGACTACTGTGTTATCCGGGATATCAGGTATTATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CAA 72 bp AGACCTATTGGCAGGGTGAGAAACGCACTGCAGCAATaGCCTACTGCTTCTGTTAGCAAGAAGGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: RPIGRVRNALQQ*PTASVSKKEVL
Trigger: CAAGACCTCCTTCTTGCTAACAGAAGCAGTAGGCAATTGCTGCAGTGCGTTTCTCACCCTGCCAATAGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGTGCTGTGATCACACGTaGTTCTTCAGGGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLCCDHT*FFRAGD
Trigger: GTCTCCAGCCCTGAAGAATCACGTGTGATCACAGCA...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp ACACAGTGCTATCTTACGCGGGAAAGCACAACAAAGGCAGTCAAGGACAGCTCCAGTGAACATTCCATCTaGAGCAGTTATCACACCCCA +
Preference number: 4 (lower is better)
Translates to: TQCYLTRESTTKAVKDSSSEHSI*SSYHTP
Trigger: TGGGGTGTGATAACTGCTTCAGATGGAATGTTCACT...GGAGCTGTCCTTGACTGCCTTTGTTGTGCTTTCCCGCGTAAGATAGCACTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp GTGCAGAATACAGATCAAGGCCTGGCACTGCTGGTCAGTTTGCCACGCTATATAGTGACCAGACCAACATaGCAAGATTGTCCCGTTCTT +
Preference number: 4 (lower is better)
Translates to: VQNTDQGLALLVSLPRYIVTRPT*QDCPVL
Trigger: AAGAACGGGACAATCTTGGCATGTTGGTCTGGTCAC...TATATAGCGTGGCAAACTGACCAGCAGTGCCAGGCCTTGATCTGTATTCTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGTGCACTGTCAGAATCTaGAGCAAGCTCTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLCTVRI*SKLSPV
Trigger: GACAGGGGAGAGCTTGCTGCAGATTCTGACAGTGCA...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp ATTTTGAGGAAGTGGCGTCTCCACAAACACTGTACACCCAGACAACGCGGCATTACGCACTGCAGCAATTaGCTACTGCTTCTGTTAGCA +
Preference number: 4 (lower is better)
Translates to: ILRKWRLHKHCTPRQRGITHCSN*LLLLLA
Trigger: TGCTAACAGAAGCAGTAGGCAATTGCTGCAGTGCGT...AATGCCGCGTTGTCTGGGTGTACAGTGTTTGTGGAGACGCCACTTCCTCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp ACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTGCCAACACTAATGTACACAGTCCACTCATCTaGGAAAGGGGTAAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: TTRHLCYTSTRLCANTNVHSPLI*ERGKVG
Trigger: CCCAACTTTACCCCTTTCCCAGATGAGTGGACTGTG...TACATTAGTGTTGGCACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp AAGCTGCAGAGATTCAGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTCTTAATGGAATTATCTaGGGACTTCACAGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: KLQRFRDWQKEHRTGPLGLNGII*GLHRLL
Trigger: CAGAAGCCTGTGAAGTCCCCAGATAATTCCATTAAG...ACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCTGAATCTCTGCAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp CTCATAATACCTGATATCCCGGATAACACAGTAGTCCACACCAAGTGTTCAAAGGAGCTCTCTGGGAAGTaGCGCCAACATGGAGGAACG +
Preference number: 4 (lower is better)
Translates to: LIIPDIPDNTVVHTKCSKELSGK*RQHGGT
Trigger: CGTTCCTCCATGTTGGCGCCACTTCCCAGAGAGCTC...CTTTGAACACTTGGTGTGGACTACTGTGTTATCCGGGATATCAGGTATTATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CAA 72 bp GTGAAAAGAAGCCTCTCCCTCATCACTAGTGTTATTTaGCTAACCCTGTCTCCAGGTAGCAGCAGCAATCCG +
Preference number: 4 (lower is better)
Translates to: VKRSLSLITSVI*LTLSPGSSSNP
Trigger: CGGATTGCTGCTGCTACCTGGAGACAGGGTTAGCAAAATAACACTAGTGATGAGGGAGAGGCTTCTTTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp GACTTCACAGGCTTCTGGTTACTGGGCCCATTGGTCTCTTCTTTACCATGTTCTGTTCCCAATCACGTCTaGGATTGCCTGAAAATCTCG +
Preference number: 4 (lower is better)
Translates to: DFTGFWLLGPLVSSLPCSVPNHV*DCLKIS
Trigger: CGAGATTTTCAGGCAATCTCAGACGTGATTGGGAAC...AGAACATGGTAAAGAAGAGACCAATGGGCCCAGTAACCAGAAGCCTGTGAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560472.1
CDS-3UTR TCA 90 bp GCTCAACCCTCAGCAGGCCCATGGTCTGATAAGATAACAAAAGTGATTCTGGAAACAGCAGGCTTATGGTaGAAAGAAGCCTCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: AQPSAGPWSDKITKVILETAGLW*KEASPS
Trigger: TGAGGGAGAGGCTTCTTTTCACCATAAGCCTGCTGT...TTCCAGAATCACTTTTGTTATCTTATCAGACCATGGGCCTGCTGAGGGTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp CTTGTTCCCAGTCCAACCAAAAGGCATTACAGACCACTCTGTAGGTTATTTCTTTGTCCCGTTCTTGACTaGGTCTTGCCAGTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: LVPSPTKRHYRPLCRLFLCPVLD*VLPVWR
Trigger: CCGCCAAACTGGCAAGACGCAGTCAAGAACGGGACA...AAGAAATAACCTACAGAGTGGTCTGTAATGCCTTTTGGTTGGACTGGGAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGCTGGAGACCATTCAGTaGCAGGAACCAAGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLLETIQ*QEPSKG
Trigger: CCCTTTACTTGGTTCCTGGCACTGAATGGTCTCCAG...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp ATTTTGAGGAAGTGGCGTCTCCACAAACACTGTACACCCAGACAACGCGGCATTCAAATAAAAATGACATaGCCCTTCCTCTCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: ILRKWRLHKHCTPRQRGIQIKMT*PFLSGR
Trigger: TCTCCCCGAGAGGAAGGGGCATGTCATTTTTATTTG...AATGCCGCGTTGTCTGGGTGTACAGTGTTTGTGGAGACGCCACTTCCTCAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp ACACAGTGCTATCTTACGCGGGAAAGCACAACAAAGGCAGTCAAGGACAGCTCCCAGTTTAAAACACAGTaGTATCTTACGCGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: TQCYLTRESTTKAVKDSSQFKTQ*YLTRES
Trigger: GCTTTCCCGCGTAAGATAGCACTGTGTTTTAAACTG...GGAGCTGTCCTTGACTGCCTTTGTTGTGCTTTCCCGCGTAAGATAGCACTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp GGACCACTAGGTTTAGGTGACCTGGCTACCTGGAGTCCATCTGAGGAAAGTTTCACGCCACTGCAATTGTaGTTTACTACAGGTAAGACA +
Preference number: 4 (lower is better)
Translates to: GPLGLGDLATWSPSEESFTPLQL*FTTGKT
Trigger: TGTCTTACCTGTAGTAAAGCACAATTGCAGTGGCGT...GAAACTTTCCTCAGATGGACTCCAGGTAGCCAGGTCACCTAAACCTAGTGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp ATTTTGAGGAAGTGGCGTCTCCACAAACACTGTACACCCAGACAACGCGGCATTCTGACAGATTTTGATTaGGTGACCAGACCAACATGC +
Preference number: 4 (lower is better)
Translates to: ILRKWRLHKHCTPRQRGILTDFD*VTRPTC
Trigger: GCATGTTGGTCTGGTCACCCAATCAAAATCTGTCAG...AATGCCGCGTTGTCTGGGTGTACAGTGTTTGTGGAGACGCCACTTCCTCAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp GTGCAGAATACAGATCAAGGCCTGGCACTGCTGGTCAGTTTGCCACGCTATATATTTTGTTTCCGGGCATaGCGATCCATCACACTAGTT +
Preference number: 4 (lower is better)
Translates to: VQNTDQGLALLVSLPRYIFCFRA*RSITLV
Trigger: AACTAGTGTGATGGATCGCCATGCCCGGAAACAAAA...TATATAGCGTGGCAAACTGACCAGCAGTGCCAGGCCTTGATCTGTATTCTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp CTTCTGGTTACTGGGCCCATTGGTCTCTTCTTTACCATGTTCTGCCTCCCATTCGGTTACTGGGCCCATTaGTCTCTTCTTTACCATGTT +
Preference number: 4 (lower is better)
Translates to: LLVTGPIGLFFTMFCLPFGYWAH*SLLYHV
Trigger: AACATGGTAAAGAAGAGACCAATGGGCCCAGTAACC...GAATGGGAGGCAGAACATGGTAAAGAAGAGACCAATGGGCCCAGTAACCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560472.1
CDS-3UTR CCA 90 bp GCTCAACCCTCAGCAGGCCCATGGTCTGATAAGATAACAAAAGTGATTCTGGAAAAAAGAGGCCCTCGTTaGAGTTGGCTCCATCTTTCC +
Preference number: 4 (lower is better)
Translates to: AQPSAGPWSDKITKVILEKRGPR*SWLHLS
Trigger: GGAAAGATGGAGCCAACTCCAACGAGGGCCTCTTTT...TTCCAGAATCACTTTTGTTATCTTATCAGACCATGGGCCTGCTGAGGGTTGAGC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp TCAAAGCCACCAGTTTCTCAGGAGGCAGATGCATATCTGACATCCAGAACAGGAACGTCTGAGATTGCCTaGAAATCTCGGCCATATTTC +
Preference number: 4 (lower is better)
Translates to: SKPPVSQEADAYLTSRTGTSEIA*KSRPYF
Trigger: GAAATATGGCCGAGATTTTCAGGCAATCTCAGACGT...TCCTGTTCTGGATGTCAGATATGCATCTGCCTCCTGAGAAACTGGTGGCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560472.1
CDS-3UTR TCA 90 bp GCTCAACCCTCAGCAGGCCCATGGTCTGATAAGATAACAAAAGTGATTCTGGAAGTTCCCAATCACGTCTaGGATTGCCTGAAAATCTCG +
Preference number: 4 (lower is better)
Translates to: AQPSAGPWSDKITKVILEVPNHV*DCLKIS
Trigger: CGAGATTTTCAGGCAATCTCAGACGTGATTGGGAAC...TTCCAGAATCACTTTTGTTATCTTATCAGACCATGGGCCTGCTGAGGGTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp AGGTCAGCTGCTGTGATCACACGTGATTCTTCAGGGCTGGAGACCATTCAGTGCAAACTTCATCTATGTTaGAGCGGCGTCGATAATTTA +
Preference number: 4 (lower is better)
Translates to: RSAAVITRDSSGLETIQCKLHLC*SGVDNL
Trigger: TAAATTATCGACGCCGCTTCAACATAGATGAAGTTT...GCACTGAATGGTCTCCAGCCCTGAAGAATCACGTGTGATCACAGCAGCTGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp GGACCACTAGGTTTAGGTGACCTGGCTACCTGGAGTCCATCTGAGGAAAGTTTCAAGACAAAGCTTAAGTaGACATTCCATCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GPLGLGDLATWSPSEESFKTKLK*TFHLKQ
Trigger: CTGCTTCAGATGGAATGTTCACTTAAGCTTTGTCTT...GAAACTTTCCTCAGATGGACTCCAGGTAGCCAGGTCACCTAAACCTAGTGGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp ACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTGCCAACACTAATGTATACCTGGAGTCCATCTaGGGAAAGTTTCACTTGACA +
Preference number: 4 (lower is better)
Translates to: TTRHLCYTSTRLCANTNVYLESI*GKFHLT
Trigger: TGTCAAGTGAAACTTTCCTCAGATGGACTCCAGGTA...TACATTAGTGTTGGCACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp TCAAAGCCACCAGTTTCTCAGGAGGCAGATGCATATCTGACATCCAGAACAGGATTCTCAGGAGGCAGATaGATATCTGACATCCAGAAC +
Preference number: 4 (lower is better)
Translates to: SKPPVSQEADAYLTSRTGFSGGR*ISDIQN
Trigger: GTTCTGGATGTCAGATATGCATCTGCCTCCTGAGAA...TCCTGTTCTGGATGTCAGATATGCATCTGCCTCCTGAGAAACTGGTGGCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560472.1
CDS-3UTR CCA 90 bp CCACACCAAGTGTTCAAAGCCACCAGTTTCTCAGGAGGCAGATGCATATCTGACCTCTGGAAGTCGATATaGTTCTATTCCACCATCAAG +
Preference number: 4 (lower is better)
Translates to: PHQVFKATSFSGGRCISDLWKSI*FYSTIK
Trigger: CTTGATGGTGGAATAGAACCATATCGACTTCCAGAG...GTCAGATATGCATCTGCCTCCTGAGAAACTGGTGGCTTTGAACACTTGGTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560472.1
CDS-3UTR CCA 90 bp GCTCAACCCTCAGCAGGCCCATGGTCTGATAAGATAACAAAAGTGATTCTGGAAGAAGTGGCGCCAACATaGAGGAACGAGCAAAGAATT +
Preference number: 4 (lower is better)
Translates to: AQPSAGPWSDKITKVILEEVAPT*RNEQRI
Trigger: AATTCTTTGCTCGTTCCTCCATGTTGGCGCCACTTC...TTCCAGAATCACTTTTGTTATCTTATCAGACCATGGGCCTGCTGAGGGTTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp ACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTGCCAACACTAATGTAATGCAGATGGCTAGGTaGTGTCTCATAATACCTGAT +
Preference number: 4 (lower is better)
Translates to: TTRHLCYTSTRLCANTNVMQMAR*CLIIPD
Trigger: ATCAGGTATTATGAGACATCACCTAGCCATCTGCAT...TACATTAGTGTTGGCACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp ACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTGCCAACACTAATGTAACAATGCTGAAAAGTTaGAGGCAGAAAGCATTGAGG +
Preference number: 4 (lower is better)
Translates to: TTRHLCYTSTRLCANTNVTMLKS*RQKALR
Trigger: CCTCAATGCTTTCTGCCTTCAACTTTTCAGCATTGT...TACATTAGTGTTGGCACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp ACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTGCCAACACTAATGTATCCATGTTGTACCCATaGTTTTCTTTGGCAATGGCA +
Preference number: 4 (lower is better)
Translates to: TTRHLCYTSTRLCANTNVSMLYP*FSLAMA
Trigger: TGCCATTGCCAAAGAAAAGCATGGGTACAACATGGA...TACATTAGTGTTGGCACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp ACACAGTGCTATCTTACGCGGGAAAGCACAACAAAGGCAGTCAAGGACAGCTCCTCGATATTATGTTTATaGCAGAAGAGCATCCCAAGA +
Preference number: 4 (lower is better)
Translates to: TQCYLTRESTTKAVKDSSSILCL*QKSIPR
Trigger: TCTTGGGATGCTCTTCTGGCATAAACATAATATCGA...GGAGCTGTCCTTGACTGCCTTTGTTGTGCTTTCCCGCGTAAGATAGCACTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp TTTACTACAGGTAAGACAGGTAAGAGAAGCTGCAGAGATTCAGGGACTGGCAGAGGGATTGTTTCCATTTaGCTCTTCCAGTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: FTTGKTGKRSCRDSGTGRGIVSI*LFQFIL
Trigger: GAGGATGAACTGGAAGAGGCAAATGGAAACAATCCC...TCTGCCAGTCCCTGAATCTCTGCAGCTTCTCTTACCTGTCTTACCTGTAGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp CTTGTTCCCAGTCCAACCAAAAGGCATTACAGACCACTCTGTAGGTTATTTCTTACAGGTAAGAGAAGCTaGAGAGATTCAGGGACTGGC +
Preference number: 4 (lower is better)
Translates to: LVPSPTKRHYRPLCRLFLTGKRS*RDSGTG
Trigger: GCCAGTCCCTGAATCTCTGCAGCTTCTCTTACCTGT...AAGAAATAACCTACAGAGTGGTCTGTAATGCCTTTTGGTTGGACTGGGAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp TTTACTACAGGTAAGACAGGTAAGAGAAGCTGCAGAGATTCAGGGACTGGCAGACATCATCACACAACATaGATAGCCTCTGCTGACCTT +
Preference number: 4 (lower is better)
Translates to: FTTGKTGKRSCRDSGTGRHHHTT*IASADL
Trigger: AAGGTCAGCAGAGGCTATGCATGTTGTGTGATGATG...TCTGCCAGTCCCTGAATCTCTGCAGCTTCTCTTACCTGTCTTACCTGTAGTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp ACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTGCCAACACTAATGTACTCTGGAAGTCGATATaGTTCTATTCCACCATCAAG +
Preference number: 4 (lower is better)
Translates to: TTRHLCYTSTRLCANTNVLWKSI*FYSTIK
Trigger: CTTGATGGTGGAATAGAACCATATCGACTTCCAGAG...TACATTAGTGTTGGCACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp GCTCAACCCTCAGCAGGCCCATGGTCTGATAAGATAACAAAAGTGATTCTGGAAGGTTACTGGGCCCATTaGTCTCTTCTTTACCATGTT +
Preference number: 4 (lower is better)
Translates to: AQPSAGPWSDKITKVILEGYWAH*SLLYHV
Trigger: AACATGGTAAAGAAGAGACCAATGGGCCCAGTAACC...TTCCAGAATCACTTTTGTTATCTTATCAGACCATGGGCCTGCTGAGGGTTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp ACACAGTGCTATCTTACGCGGGAAAGCACAACAAAGGCAGTCAAGGACAGCTCCTTGCATCAGGATGCTTaGCATGATAAAGGTTATGAT +
Preference number: 4 (lower is better)
Translates to: TQCYLTRESTTKAVKDSSLHQDA*HDKGYD
Trigger: ATCATAACCTTTATCATGCCAAGCATCCTGATGCAA...GGAGCTGTCCTTGACTGCCTTTGTTGTGCTTTCCCGCGTAAGATAGCACTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp TTTACTACAGGTAAGACAGGTAAGAGAAGCTGCAGAGATTCAGGGACTGGCAGACCCTCAGCAGGCCCATaGTCTGATAAGATAACAAAA +
Preference number: 4 (lower is better)
Translates to: FTTGKTGKRSCRDSGTGRPSAGP*SDKITK
Trigger: TTTTGTTATCTTATCAGACCATGGGCCTGCTGAGGG...TCTGCCAGTCCCTGAATCTCTGCAGCTTCTCTTACCTGTCTTACCTGTAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CAA 72 bp GCAGATGGAGCACAGGACTGGAAGTATATGCCTTTTTaGGTAATAGCTGCTTGTCCAGAGAGATGTGATGCA +
Preference number: 4 (lower is better)
Translates to: ADGAQDWKYMPF*VIAACPERCDA
Trigger: TGCATCACATCTCTCTGGACAAGCAGCTATTACCAAAAAAGGCATATACTTCCAGTCCTGTGCTCCATCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp ATTTTGAGGAAGTGGCGTCTCCACAAACACTGTACACCCAGACAACGCGGCATTGGGCAAATCAGCCAATaGCTTTTCGATATTATGTTT +
Preference number: 4 (lower is better)
Translates to: ILRKWRLHKHCTPRQRGIGQISQ*LFDIMF
Trigger: AAACATAATATCGAAAAGTCATTGGCTGATTTGCCC...AATGCCGCGTTGTCTGGGTGTACAGTGTTTGTGGAGACGCCACTTCCTCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp TCTTCGGGCATCTTAATGGAATTATCTGGGGACTTCACAGGCTTCTGGTTACTGTTTCACTTGTACCACTaGTTTGTTCCCAATCACGTC +
Preference number: 4 (lower is better)
Translates to: SSGILMELSGDFTGFWLLFHLYH*FVPNHV
Trigger: GACGTGATTGGGAACAAATCAGTGGTACAAGTGAAA...CAGTAACCAGAAGCCTGTGAAGTCCCCAGATAATTCCATTAAGATGCCCGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560472.1
CDS-3UTR TCA 90 bp TGGAATTATCTGGGGACTTCACAGGCTTCTGGTTACTGGGCCCATTGGTCTCTTAAACTTCATCTATGTTaGAGCGGCGTCGATAATTTA +
Preference number: 4 (lower is better)
Translates to: WNYLGTSQASGYWAHWSLKLHLC*SGVDNL
Trigger: TAAATTATCGACGCCGCTTCAACATAGATGAAGTTT...AAGAGACCAATGGGCCCAGTAACCAGAAGCCTGTGAAGTCCCCAGATAATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560472.1
CDS-3UTR TCA 90 bp GCTCAACCCTCAGCAGGCCCATGGTCTGATAAGATAACAAAAGTGATTCTGGAAATGTTTAGGGAAATGTaGGTTGCATCAGGATGCTTG +
Preference number: 4 (lower is better)
Translates to: AQPSAGPWSDKITKVILEMFREM*VASGCL
Trigger: CAAGCATCCTGATGCAACTCACATTTCCCTAAACAT...TTCCAGAATCACTTTTGTTATCTTATCAGACCATGGGCCTGCTGAGGGTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp GCTCAACCCTCAGCAGGCCCATGGTCTGATAAGATAACAAAAGTGATTCTGGAACTCTGTCCTGTACTCTaGTATGAAAAGAGAGTGCAT +
Preference number: 4 (lower is better)
Translates to: AQPSAGPWSDKITKVILELCPVL*YEKRVH
Trigger: ATGCACTCTCTTTTCATATCAGAGTACAGGACAGAG...TTCCAGAATCACTTTTGTTATCTTATCAGACCATGGGCCTGCTGAGGGTTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp ACACTGTACACCCAGACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTGTATTATCACTTAGGTaGTTGTCTCAGAAAAGAACA +
Preference number: 4 (lower is better)
Translates to: TLYTQTTRHLCYTSTRLCVLSLR*LSQKRT
Trigger: TGTTCTTTTCTGAGACAACCACCTAAGTGATAATAC...ACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGTCTGGGTGTACAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CAA 72 bp CAGAATACAGATCAAGGCCTGGCACTGCTGGTCAGTTaGCCACGCTATATAAAAATTAGCATCAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: QNTDQGLALLVS*PRYIKISIKLP
Trigger: TGGAAGCTTGATGCTAATTTTTATATAGCGTGGCAAACTGACCAGCAGTGCCAGGCCTTGATCTGTATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp CTTGTTCCCAGTCCAACCAAAAGGCATTACAGACCACTCTGTAGGTTATTTCTTACGTCTGAGATTGCCTaGAAATCTCGGCCATATTTC +
Preference number: 4 (lower is better)
Translates to: LVPSPTKRHYRPLCRLFLTSEIA*KSRPYF
Trigger: GAAATATGGCCGAGATTTTCAGGCAATCTCAGACGT...AAGAAATAACCTACAGAGTGGTCTGTAATGCCTTTTGGTTGGACTGGGAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGAATCACATCAGCACATaGAGGACACAAACTGACATA +
Preference number: 4 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLNHIST*RTQTDI
Trigger: TATGTCAGTTTGTGTCCTTCATGTGCTGATGTGATT...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGAGAATGGATCACTGTTaGAGACCAGTCAACACAATA +
Preference number: 4 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLRMDHC*RPVNTI
Trigger: TATTGTGTTGACTGGTCTGCAACAGTGATCCATTCT...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp GTGCAGAATACAGATCAAGGCCTGGCACTGCTGGTCAGTTTGCCACGCTATATAGTCTGTTTAATATTCTaGATCTGTCGTTTGACTGAA +
Preference number: 4 (lower is better)
Translates to: VQNTDQGLALLVSLPRYIVCLIF*ICRLTE
Trigger: TTCAGTCAAACGACAGATCCAGAATATTAAACAGAC...TATATAGCGTGGCAAACTGACCAGCAGTGCCAGGCCTTGATCTGTATTCTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp CTCATAATACCTGATATCCCGGATAACACAGTAGTCCACACCAAGTGTTCAAAGACCATTTTGAGGAAGTaGCGTCTCCACAAACACTGT +
Preference number: 4 (lower is better)
Translates to: LIIPDIPDNTVVHTKCSKTILRK*RLHKHC
Trigger: ACAGTGTTTGTGGAGACGCCACTTCCTCAAAATGGT...CTTTGAACACTTGGTGTGGACTACTGTGTTATCCGGGATATCAGGTATTATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp CTTGTTCCCAGTCCAACCAAAAGGCATTACAGACCACTCTGTAGGTTATTTCTTTCTGGATCTGTCGTTTaGCTGAAACCAATTCCATGT +
Preference number: 4 (lower is better)
Translates to: LVPSPTKRHYRPLCRLFLSGSVV*LKPIPC
Trigger: ACATGGAATTGGTTTCAGTCAAACGACAGATCCAGA...AAGAAATAACCTACAGAGTGGTCTGTAATGCCTTTTGGTTGGACTGGGAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp CTTGTTCCCAGTCCAACCAAAAGGCATTACAGACCACTCTGTAGGTTATTTCTTATTGATAACCATGGTTaGCAAAAGGAGAAGGCACCA +
Preference number: 4 (lower is better)
Translates to: LVPSPTKRHYRPLCRLFLIDNHG*QKEKAP
Trigger: TGGTGCCTTCTCCTTTTGGCAACCATGGTTATCAAT...AAGAAATAACCTACAGAGTGGTCTGTAATGCCTTTTGGTTGGACTGGGAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGTTTCTGAATGACCTCTaGAAGTCGATATGGTTCTAT +
Preference number: 4 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLFLNDL*KSIWFY
Trigger: ATAGAACCATATCGACTTCCAGAGGTCATTCAGAAA...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp CTTGTTCCCAGTCCAACCAAAAGGCATTACAGACCACTCTGTAGGTTATTTCTTTTGACAATAGAAGCTTaGATCCTGGATCATTCGGTT +
Preference number: 4 (lower is better)
Translates to: LVPSPTKRHYRPLCRLFLLTIEA*ILDHSV
Trigger: AACCGAATGATCCAGGATTCAAGCTTCTATTGTCAA...AAGAAATAACCTACAGAGTGGTCTGTAATGCCTTTTGGTTGGACTGGGAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGGGTTATGATGCAGTCTaGCAATATATATTAGTTTCC +
Preference number: 4 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLGYDAV*QYILVS
Trigger: GGAAACTAATATATATTGCCAGACTGCATCATAACC...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CCA 90 bp CTTGTTCCCAGTCCAACCAAAAGGCATTACAGACCACTCTGTAGGTTATTTCTTAGCTATATTACAGAATaGATCACTGTTGCAGACCAG +
Preference number: 4 (lower is better)
Translates to: LVPSPTKRHYRPLCRLFLSYITE*ITVADQ
Trigger: CTGGTCTGCAACAGTGATCCATTCTGTAATATAGCT...AAGAAATAACCTACAGAGTGGTCTGTAATGCCTTTTGGTTGGACTGGGAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR TCA 90 bp CTCATAATACCTGATATCCCGGATAACACAGTAGTCCACACCAAGTGTTCAAAGGTTTGTTTTGTGTGTTaGATAGAGGTTTGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: LIIPDIPDNTVVHTKCSKVCFVC*IEVCEH
Trigger: ATGCTCACAAACCTCTATTCAACACACAAAACAAAC...CTTTGAACACTTGGTGTGGACTACTGTGTTATCCGGGATATCAGGTATTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR GCA 90 bp CTCATAATACCTGATATCCCGGATAACACAGTAGTCCACACCAAGTGTTCAAAGTTCTGTAGTCCAACGTaGATTACATTTCTGAATGAC +
Preference number: 4 (lower is better)
Translates to: LIIPDIPDNTVVHTKCSKFCSPT*ITFLND
Trigger: GTCATTCAGAAATGTAATGCACGTTGGACTACAGAA...CTTTGAACACTTGGTGTGGACTACTGTGTTATCCGGGATATCAGGTATTATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CAA 72 bp AATCATAACTGTACCCCATGTTTAGGGAAATGTGAGTaGCATCAGGATGCTTGGCATGATAAAGGTTATGAT +
Preference number: 4 (lower is better)
Translates to: NHNCTPCLGKCE*HQDAWHDKGYD
Trigger: ATCATAACCTTTATCATGCCAAGCATCCTGATGCAACTCACATTTCCCTAAACATGGGGTACAGTTATGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
3UTR CAA 72 bp CATAAAAGCAGGGATCCAGTTAGCGTAATGCACTGTTaGGCTTATTTTTGGTGTGCAATTATACCAATAGTA +
Preference number: 4 (lower is better)
Translates to: HKSRDPVSVMHC*AYFWCAIIPIV
Trigger: TACTATTGGTATAATTGCACACCAAAAATAAGCCAAACAGTGCATTACGCTAACTGGATCCCTGCTTTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS CCA 90 bp CTGCTGCTGTTGCCATTGGGCGCCGCCGCCGCCAAACTTTTATTCTaGCCATTATTGGGGGCGGCGGCGGCTGAGGCGGCGGCGGCCGAG +
Preference number: 5 (lower is better)
Translates to: LLLLPLGAAAAKLLF*PLLGAAAAEAAAAE
Trigger: CTCGGCCGCCGCCGCCTCAGCCGCCGCCGCCCCCAATAATGGCCAGAATAAAAGTTTGGCGGCGGCGGCGCCCAATGGCAACAGCAGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp AGGCCATGCAGGAACAGAGTCGGGCCTTCCAAGGAGACTGCCTGCTCTGAAGCTCTGCGTCTTGCCAGTTaGGCGGGGTCGAAGTCGGGC +
Preference number: 5 (lower is better)
Translates to: RPCRNRVGPSKETACSEALRLAS*AGSKSG
Trigger: GCCCGACTTCGACCCCGCCAAACTGGCAAGACGCAG...AGCTTCAGAGCAGGCAGTCTCCTTGGAAGGCCCGACTCTGTTCCTGCATGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp GCTCAACCCTCAGCAGGCCCATGGTCTGATAAGATAACAAAAGTGATTCTGGAAGCGGAGGCGGCCGCGTaGTTCCTCCCTCTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: AQPSAGPWSDKITKVILEAEAAA*FLPLRF
Trigger: GAAGCGGAGAGGGAGGAACAACGCGGCCGCCTCCGC...TTCCAGAATCACTTTTGTTATCTTATCAGACCATGGGCCTGCTGAGGGTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp ATTCAGTGCCAGGAACCAAGTAAAGGGATAGTGCAGAATACAGATCAAGGCCTGGAGTTGCTGCTGCTGTaGCCATTGGGCGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: IQCQEPSKGIVQNTDQGLELLLL*PLGAAA
Trigger: GGCGGCGGCGCCCAATGGCAACAGCAGCAGCAACTC...CAGGCCTTGATCTGTATTCTGCACTATCCCTTTACTTGGTTCCTGGCACTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp AAGCTGCAGAGATTCAGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTGTTCTTGACTGCGTCTaGCCAGTTTGGCGGGGTCGA +
Preference number: 5 (lower is better)
Translates to: KLQRFRDWQKEHRTGPLGVLDCV*PVWRGR
Trigger: TCGACCCCGCCAAACTGGCAAGACGCAGTCAAGAAC...ACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCTGAATCTCTGCAGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp AGGCCATGCAGGAACAGAGTCGGGCCTTCCAAGGAGACTGCCTGCTCTGAAGCTTGGGATTGTTTCCATTaGCCTCTTCCAGTTCATCCT +
Preference number: 5 (lower is better)
Translates to: RPCRNRVGPSKETACSEAWDCFH*PLPVHP
Trigger: AGGATGAACTGGAAGAGGCAAATGGAAACAATCCCA...AGCTTCAGAGCAGGCAGTCTCCTTGGAAGGCCCGACTCTGTTCCTGCATGGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp ACACAGTGCTATCTTACGCGGGAAAGCACAACAAAGGCAGTCAAGGACAGCTCCAGCAAGAAGGAGGTCTaGAGGGAAGCACGGAGAACC +
Preference number: 5 (lower is better)
Translates to: TQCYLTRESTTKAVKDSSSKKEV*REARRT
Trigger: GGTTCTCCGTGCTTCCCTCAAGACCTCCTTCTTGCT...GGAGCTGTCCTTGACTGCCTTTGTTGTGCTTTCCCGCGTAAGATAGCACTGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp AAGCTGCAGAGATTCAGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTCAGACAACGCGGCATTaGTGTTACACTAGCACCCGA +
Preference number: 5 (lower is better)
Translates to: KLQRFRDWQKEHRTGPLGQTTRH*CYTSTR
Trigger: TCGGGTGCTAGTGTAACACAAATGCCGCGTTGTCTG...ACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCTGAATCTCTGCAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp GCTCAACCCTCAGCAGGCCCATGGTCTGATAAGATAACAAAAGTGATTCTGGAACTCCCGCTCCCGTTTTaGTTTCCGGGCATGGCGATC +
Preference number: 5 (lower is better)
Translates to: AQPSAGPWSDKITKVILELPLPF*FPGMAI
Trigger: GATCGCCATGCCCGGAAACAAAAACGGGAGCGGGAG...TTCCAGAATCACTTTTGTTATCTTATCAGACCATGGGCCTGCTGAGGGTTGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp CCAGGCACACCGAGAGAACGCGGAACAACGCGCAGCTTTCATAAACCAGCGCCATTCTGGATCTGTCGTTaGACTGAAACCAATTCCATG +
Preference number: 5 (lower is better)
Translates to: PGTPRERGTTRSFHKPAPFWICR*TETNSM
Trigger: CATGGAATTGGTTTCAGTCAAACGACAGATCCAGAA...TGGCGCTGGTTTATGAAAGCTGCGCGTTGTTCCGCGTTCTCTCGGTGTGCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp AAGCTGCAGAGATTCAGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTATATTTCCTGATGGCTaGTACGGCGAGAAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: KLQRFRDWQKEHRTGPLGIFPDG*YGEKLL
Trigger: GAGCAGCTTCTCGCCGTACAAGCCATCAGGAAATAT...ACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCTGAATCTCTGCAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp GAGGCAGATGCATATCTGACATCCAGAACAGGAGCCTCGTCTTCCTCTTCGGGCTGGTTACTGGGCCCATaGGTCTCTTCTTTACCATGT +
Preference number: 5 (lower is better)
Translates to: EADAYLTSRTGASSSSSGWLLGP*VSSLPC
Trigger: ACATGGTAAAGAAGAGACCAATGGGCCCAGTAACCA...GCCCGAAGAGGAAGACGAGGCTCCTGTTCTGGATGTCAGATATGCATCTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560472.1
CDS-3UTR CAA 90 bp GTGCAGAATACAGATCAAGGCCTGGCACTGCTGGTCAGTTTGCCACGCTATATAAGGCCCTCGTTGGAGTaGGCTCCATCTTTCCTTAGC +
Preference number: 5 (lower is better)
Translates to: VQNTDQGLALLVSLPRYIRPSLE*APSFLS
Trigger: GCTAAGGAAAGATGGAGCCAACTCCAACGAGGGCCT...TATATAGCGTGGCAAACTGACCAGCAGTGCCAGGCCTTGATCTGTATTCTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp AGGTCAGCTGCTGTGATCACACGTGATTCTTCAGGGCTGGAGACCATTCAGTGCTGGTTACTGGGCCCATaGGTCTCTTCTTTACCATGT +
Preference number: 5 (lower is better)
Translates to: RSAAVITRDSSGLETIQCWLLGP*VSSLPC
Trigger: ACATGGTAAAGAAGAGACCAATGGGCCCAGTAACCA...GCACTGAATGGTCTCCAGCCCTGAAGAATCACGTGTGATCACAGCAGCTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp TGGAATTATCTGGGGACTTCACAGGCTTCTGGTTACTGGGCCCATTGGTCTCTTCAATCACGTCTGAGATaGCCTGAAAATCTCGGCCAT +
Preference number: 5 (lower is better)
Translates to: WNYLGTSQASGYWAHWSLQSRLR*PENLGH
Trigger: ATGGCCGAGATTTTCAGGCAATCTCAGACGTGATTG...AAGAGACCAATGGGCCCAGTAACCAGAAGCCTGTGAAGTCCCCAGATAATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560472.1
CDS-3UTR CAA 90 bp AAGCTGCAGAGATTCAGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTCACAATGCTGAAAAGTaGAAGGCAGAAAGCATTGAG +
Preference number: 5 (lower is better)
Translates to: KLQRFRDWQKEHRTGPLGHNAEK*KAESIE
Trigger: CTCAATGCTTTCTGCCTTCAACTTTTCAGCATTGTG...ACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCTGAATCTCTGCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp ACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTGCCAACACTAATGTACAATCACGTCTGAGATaGCCTGAAAATCTCGGCCAT +
Preference number: 5 (lower is better)
Translates to: TTRHLCYTSTRLCANTNVQSRLR*PENLGH
Trigger: ATGGCCGAGATTTTCAGGCAATCTCAGACGTGATTG...TACATTAGTGTTGGCACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp TATCTGGGGACTTCACAGGCTTCTGGTTACTGGGCCCATTGGTCTCTTCTTTACACTTGTACCACTGATTaGTTCCCAATCACGTCTGAG +
Preference number: 5 (lower is better)
Translates to: YLGTSQASGYWAHWSLLYTCTTD*FPITSE
Trigger: CTCAGACGTGATTGGGAACAAATCAGTGGTACAAGT...GTAAAGAAGAGACCAATGGGCCCAGTAACCAGAAGCCTGTGAAGTCCCCAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560472.1
CDS-3UTR CAA 90 bp AGGGACTGGCAGAAAGAGCATCGCACAGGACCACTAGGTTTAGGTGACCTGGCTAAGTATATGCCTTTTTaGGTAATAGCTGCTTGTCCA +
Preference number: 5 (lower is better)
Translates to: RDWQKEHRTGPLGLGDLAKYMPF*VIAACP
Trigger: TGGACAAGCAGCTATTACCAAAAAAGGCATATACTT...AGCCAGGTCACCTAAACCTAGTGGTCCTGTGCGATGCTCTTTCTGCCAGTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp GCTCAACCCTCAGCAGGCCCATGGTCTGATAAGATAACAAAAGTGATTCTGGAAAACGCACTGCAGCAATaGCCTACTGCTTCTGTTAGC +
Preference number: 5 (lower is better)
Translates to: AQPSAGPWSDKITKVILENALQQ*PTASVS
Trigger: GCTAACAGAAGCAGTAGGCAATTGCTGCAGTGCGTT...TTCCAGAATCACTTTTGTTATCTTATCAGACCATGGGCCTGCTGAGGGTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp TTTACTACAGGTAAGACAGGTAAGAGAAGCTGCAGAGATTCAGGGACTGGCAGAAAAAAGAGGCCCTCGTaGGAGTTGGCTCCATCTTTC +
Preference number: 5 (lower is better)
Translates to: FTTGKTGKRSCRDSGTGRKKRPS*ELAPSF
Trigger: GAAAGATGGAGCCAACTCCAACGAGGGCCTCTTTTT...TCTGCCAGTCCCTGAATCTCTGCAGCTTCTCTTACCTGTCTTACCTGTAGTAAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp ACACTGTACACCCAGACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTCTTGACAATAGAAGCTaGAATCCTGGATCATTCGGT +
Preference number: 5 (lower is better)
Translates to: TLYTQTTRHLCYTSTRLCLDNRS*NPGSFG
Trigger: ACCGAATGATCCAGGATTCAAGCTTCTATTGTCAAG...ACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGTCTGGGTGTACAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp GCTCAACCCTCAGCAGGCCCATGGTCTGATAAGATAACAAAAGTGATTCTGGAAGCGACGCCACTGCAATaGTGCTTTACTACAGGTAAG +
Preference number: 5 (lower is better)
Translates to: AQPSAGPWSDKITKVILEATPLQ*CFTTGK
Trigger: CTTACCTGTAGTAAAGCACAATTGCAGTGGCGTCGC...TTCCAGAATCACTTTTGTTATCTTATCAGACCATGGGCCTGCTGAGGGTTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp ACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTGCCAACACTAATGTAACTTGTACCACTGATTaGTTCCCAATCACGTCTGAG +
Preference number: 5 (lower is better)
Translates to: TTRHLCYTSTRLCANTNVTCTTD*FPITSE
Trigger: CTCAGACGTGATTGGGAACAAATCAGTGGTACAAGT...TACATTAGTGTTGGCACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp ACAACGCGGCATTTGTGTTACACTAGCACCCGACTGTGTGCCAACACTAATGTAAGCGTAATGCACTGTTaGGCTTATTTTTGGTGTGCA +
Preference number: 5 (lower is better)
Translates to: TTRHLCYTSTRLCANTNVSVMHC*AYFWCA
Trigger: TGCACACCAAAAATAAGCCAAACAGTGCATTACGCT...TACATTAGTGTTGGCACACAGTCGGGTGCTAGTGTAACACAAATGCCGCGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp TTTACTACAGGTAAGACAGGTAAGAGAAGCTGCAGAGATTCAGGGACTGGCAGACATTGTACTTTCCTTTaGAATGACCTTTCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: FTTGKTGKRSCRDSGTGRHCTFL*NDLSLQ
Trigger: CTGGAGAGAAAGGTCATTCAAAAGGAAAGTACAATG...TCTGCCAGTCCCTGAATCTCTGCAGCTTCTCTTACCTGTCTTACCTGTAGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp CTTGTTCCCAGTCCAACCAAAAGGCATTACAGACCACTCTGTAGGTTATTTCTTCAGAATGGATCACTGTaGCAGACCAGTCAACACAAT +
Preference number: 5 (lower is better)
Translates to: LVPSPTKRHYRPLCRLFLQNGSL*QTSQHN
Trigger: ATTGTGTTGACTGGTCTGCAACAGTGATCCATTCTG...AAGAAATAACCTACAGAGTGGTCTGTAATGCCTTTTGGTTGGACTGGGAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS-3UTR CAA 90 bp CTCATAATACCTGATATCCCGGATAACACAGTAGTCCACACCAAGTGTTCAAAGATCACTAGTGTTATTTaGCTAACCCTGTCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: LIIPDIPDNTVVHTKCSKITSVI*LTLSPG
Trigger: ACCTGGAGACAGGGTTAGCAAAATAACACTAGTGAT...CTTTGAACACTTGGTGTGGACTACTGTGTTATCCGGGATATCAGGTATTATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS GCA 90 bp TTCCTTGTTTTGATCAACCTCAATGTCAATGGGATTGTTTCCATTTaGCTCTTCCAGTTCATCCTCGCTGGAAGACAAGAACAAGTTACT +
Preference number: 5 (lower is better)
Translates to: FLVLINLNVNGIVSI*LFQFILAGRQEQVT
Trigger: AGTAACTTGTTCTTGTCTTCCAGCGAGGATGAACTGGAAGAGGCAAATGGAAACAATCCCATTGACATTGAGGTTGATCAAAACAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558495.1
CDS CCA 72 bp TTGCCATTGGGCGCCGCCGCCGCCAAACTTTTATTCTaGCCATTATTGGGGGCGGCGGCGGCTGAGGCGGCG +
Preference number: 6 (lower is better)
Translates to: LPLGAAAAKLLF*PLLGAAAAEAA
Trigger: CGCCGCCTCAGCCGCCGCCGCCCCCAATAATGGCCAGAATAAAAGTTTGGCGGCGGCGGCGCCCAATGGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS CCA 72 bp TCGCTCTCCTCCCGCTCCCGTTTTTGTTTCCGGGCATaGCGATCCATCACACTAGTTTTAGTCCTCGTCTTC +
Preference number: 6 (lower is better)
Translates to: SLSSRSRFCFRA*RSITLVLVLVF
Trigger: GAAGACGAGGACTAAAACTAGTGTGATGGATCGCCATGCCCGGAAACAAAAACGGGAGCGGGAGGAGAGCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS GCA 72 bp CTTCTGACAGATTTTGATTGGGTGACCAGACCAACATaGCAAGATTGTCCCGTTCTTGACTGCGTCTTGCCA +
Preference number: 6 (lower is better)
Translates to: LLTDFDWVTRPT*QDCPVLDCVLP
Trigger: TGGCAAGACGCAGTCAAGAACGGGACAATCTTGGCATGTTGGTCTGGTCACCCAATCAAAATCTGTCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262241.7
CDS CAA 72 bp TTTGATCAACCTCAATGTCAATGGGATTGTTTCCATTaGCCTCTTCCAGTTCATCCTCGCTGGAAGACAAGA +
Preference number: 6 (lower is better)
Translates to: FDQPQCQWDCFH*PLPVHPRWKTR
Trigger: TCTTGTCTTCCAGCGAGGATGAACTGGAAGAGGCAAATGGAAACAATCCCATTGACATTGAGGTTGATCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558495.1
CDS CAA 90 bp TTTCCTTGTTTTGATCAACCTCAATGTCAATGGGATTGTTTCCATTaGCCTCTTCCAGTTCATCCTCGCTGGAAGACAAGAACAAGTTAC +
Preference number: 6 (lower is better)
Translates to: FPCFDQPQCQWDCFH*PLPVHPRWKTRTSY
Trigger: GTAACTTGTTCTTGTCTTCCAGCGAGGATGAACTGGAAGAGGCAAATGGAAACAATCCCATTGACATTGAGGTTGATCAAAACAAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558495.1