RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RCC1L (Homo sapiens)

Ensembl gene IDs: ENSG00000274523

Ensembl transcript IDs: ENST00000610322.5, ENST00000614461.4, ENST00000615250.1, ENST00000616051.1, ENST00000618035.4, ENST00000618102.4

Found 275 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGACGTGCGGGCCACAGCGGCCCACCAAAGGCTGCCATCCAAGCTaGGTTCCGCAGGCCTCACCTGCAGCTGGAGAGGGACCTTGCCCT +
Preference number: 1 (lower is better)
Translates to: ETCGPQRPTKGCHPS*VPQASPAAGEGPCP
Trigger: AGGGCAAGGTCCCTCTCCAGCTGCAGGTGAGGCCTGCGGAACTCAGCTTGGATGGCAGCCTTTGGTGGGCCGCTGTGGCCCGCACGTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR GCA 90 bp ATGGGACGTGGGAAGGGTGCTGAGAGCCCGCTGTGGCGTGGGTCATaGCTTCTGCACCCCACTTTCCCCAGGCAAGATCCCTGGGCGCCC +
Preference number: 1 (lower is better)
Translates to: MGRGKGAESPLWRGS*LLHPTFPRQDPWAP
Trigger: GGGCGCCCAGGGATCTTGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCAGCACCCTTCCCACGTCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR CCA 90 bp AGAGCCTGTGACATGGGACGTGGGAAGGGTGCTGAGAGCCCGCTGTaGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCCAGGCAAGAT +
Preference number: 1 (lower is better)
Translates to: RACDMGRGKGAESPL*RGSCLLHPTFPRQD
Trigger: ATCTTGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCAGCACCCTTCCCACGTCCCATGTCACAGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR TCA 90 bp TTGTTCACAATTTCTGGATCTTCCTCCTCCGCCTGGCACTGCAGCTaGGCCTTGGCGGATATGCTCGGGGCCCTCGGCGCAGAGGAACTT +
Preference number: 1 (lower is better)
Translates to: LFTISGSSSSAWHCS*ALADMLGALGAEEL
Trigger: AAGTTCCTCTGCGCCGAGGGCCCCGAGCATATCCGCCAAGGCTCAGCTGCAGTGCCAGGCGGAGGAGGAAGATCCAGAAATTGTGAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR GCA 90 bp GTCCGAGGCACACGCATGGCCTTGGCCAGACACAAACCAAGAGACTaGCATGACAGACAGAGCAGAAACCTCCCGAGCACTGTGTTCAAG +
Preference number: 1 (lower is better)
Translates to: VRGTRMALARHKPRD*HDRQSRNLPSTVFK
Trigger: CTTGAACACAGTGCTCGGGAGGTTTCTGCTCTGTCTGTCATGGCAGTCTCTTGGTTTGTGTCTGGCCAAGGCCATGCGTGTGCCTCGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR TCA 90 bp AGGCACACGCATGGCCTTGGCCAGACACAAACCAAGAGACTGCCATaGCAGACAGAGCAGAAACCTCCCGAGCACTGTGTTCAAGCTAAG +
Preference number: 1 (lower is better)
Translates to: RHTHGLGQTQTKRLP*QTEQKPPEHCVQAK
Trigger: CTTAGCTTGAACACAGTGCTCGGGAGGTTTCTGCTCTGTCTGTCATGGCAGTCTCTTGGTTTGTGTCTGGCCAAGGCCATGCGTGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR TCA 90 bp GTGTTCAAGCTAAGCTTTCCTAAGACGGGCTTCTCAGGCGAGACGTaGCACCAGACACCGTCGCATGTTACTTGGAGAGAACAGAGACGT +
Preference number: 1 (lower is better)
Translates to: VFKLSFPKTGFSGET*HQTPSHVTWREQRR
Trigger: ACGTCTCTGTTCTCTCCAAGTAACATGCGACGGTGTCTGGTGTCACGTCTCGCCTGAGAAGCCCGTCTTAGGAAAGCTTAGCTTGAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR-3UTR CCA 90 bp CAGCCTCACCCTGAAGACCTGGGCCTGCTGAATGGGCCACACGCTGCCTGTGTCTGTGTCGGGGCGCGCTaGGGCCAGGGTATGGCTCTC +
Preference number: 2 (lower is better)
Translates to: QPHPEDLGLLNGPHAACVCVGAR*GQGMAL
Trigger: GAGAGCCATACCCTGGCCCCAGCGCGCCCCGACACA...GACACAGGCAGCGTGTGGCCCATTCAGCAGGCCCAGGTCTTCAGGGTGAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR-3UTR TCA 90 bp CGCCTAAGCTGGGGCTCGGTCCGAGGCACACGCATGGCCTTGGCCAGACACAAAGGCTGCCATCCAAGCTaGGTTCCGCAGGCCTCACCT +
Preference number: 2 (lower is better)
Translates to: RLSWGSVRGTRMALARHKGCHPS*VPQASP
Trigger: AGGTGAGGCCTGCGGAACTCAGCTTGGATGGCAGCC...TTTGTGTCTGGCCAAGGCCATGCGTGTGCCTCGGACCGAGCCCCAGCTTAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR-3UTR GCA 90 bp GGCGGATATGCTCGGGGCCCTCGGCGCAGAGGAACTTGGCCTCGATTCTCTTCCGACAGAGCGTCACACTaGACGCAGGGTCCTCCGCCA +
Preference number: 2 (lower is better)
Translates to: GGYARGPRRRGTWPRFSSDRASH*TQGPPP
Trigger: TGGCGGAGGACCCTGCGTGCAGTGTGACGCTCTGTC...GGAAGAGAATCGAGGCCAAGTTCCTCTGCGCCGAGGGCCCCGAGCATATCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR-3UTR TCA 90 bp CTGCAGCTGAGCCTTGGCGGATATGCTCGGGGCCCTCGGCGCAGAGGAACTTGGTTCTCAGGCGAGACGTaGCACCAGACACCGTCGCAT +
Preference number: 2 (lower is better)
Translates to: LQLSLGGYARGPRRRGTWFSGET*HQTPSH
Trigger: ATGCGACGGTGTCTGGTGTCACGTCTCGCCTGAGAA...CCAAGTTCCTCTGCGCCGAGGGCCCCGAGCATATCCGCCAAGGCTCAGCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR CAA 90 bp GGGCTTCTCAGGCGAGACGTGACACCAGACACCGTCGCATGTTACTaGGAGAGAACAGAGACGTGCGGGCCACAGCGGCCCACCAAAGGC +
Preference number: 2 (lower is better)
Translates to: GLLRRDVTPDTVACY*ERTETCGPQRPTKG
Trigger: GCCTTTGGTGGGCCGCTGTGGCCCGCACGTCTCTGTTCTCTCCAAGTAACATGCGACGGTGTCTGGTGTCACGTCTCGCCTGAGAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR CAA 90 bp CTCCCTCGCCTAAGCTGGGGCTCGGTCCGAGGCACACGCATGGCCTaGGCCAGACACAAACCAAGAGACTGCCATGACAGACAGAGCAGA +
Preference number: 2 (lower is better)
Translates to: LPRLSWGSVRGTRMA*ARHKPRDCHDRQSR
Trigger: TCTGCTCTGTCTGTCATGGCAGTCTCTTGGTTTGTGTCTGGCCAAGGCCATGCGTGTGCCTCGGACCGAGCCCCAGCTTAGGCGAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR-3UTR GCA 90 bp GTCTGCCCTTGTCCCCCAGCTATCTCCTGGTCTGCTGGGTGGGAGGGTCTCTCCAACTCCTTACCTGTTTaGCGTCCATCCCCCGGAGGT +
Preference number: 2 (lower is better)
Translates to: VCPCPPAISWSAGWEGLSNSLPV*RPSPGG
Trigger: ACCTCCGGGGGATGGACGGCAAACAGGTAAGGAGTT...GGAGAGACCCTCCCACCCAGCAGACCAGGAGATAGCTGGGGGACAAGGGCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR-3UTR GCA 90 bp GCGAGACGTGACACCAGACACCGTCGCATGTTACTTGGAGAGAACAGAGACGTGTCCGCAGGCCTCACCTaGAGCTGGAGAGGGACCTTG +
Preference number: 2 (lower is better)
Translates to: ARRDTRHRRMLLGENRDVSAGLT*SWRGTL
Trigger: CAAGGTCCCTCTCCAGCTGCAGGTGAGGCCTGCGGA...CACGTCTCTGTTCTCTCCAAGTAACATGCGACGGTGTCTGGTGTCACGTCTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR-3UTR CCA 90 bp AGACAGAGCAGAAACCTCCCGAGCACTGTGTTCAAGCTAAGCTTTCCTAAGACGGCCAAGGAGTGCCAGTaGTTCCCGGGACGGGGCCGC +
Preference number: 2 (lower is better)
Translates to: RQSRNLPSTVFKLSFPKTAKECQ*FPGRGR
Trigger: GCGGCCCCGTCCCGGGAACCACTGGCACTCCTTGGC...CGTCTTAGGAAAGCTTAGCTTGAACACAGTGCTCGGGAGGTTTCTGCTCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR-3UTR CCA 90 bp AACTTGGCCTCGATTCTCTTCCTGAGGGGCTTCTTAACTTTTCCAAGCCAGGCAGCGGACAGCTCCAGATaGAATCCCAGGCCACGGTGC +
Preference number: 2 (lower is better)
Translates to: NLASILFLRGFLTFPSQAADSSR*NPRPRC
Trigger: GCACCGTGGCCTGGGATTCCATCTGGAGCTGTCCGC...TGCCTGGCTTGGAAAAGTTAAGAAGCCCCTCAGGAAGAGAATCGAGGCCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR-3UTR CCA 90 bp GTATATAGGCAATACGATTATTACAGAAGCCGATGGGTTCCCTCAGACCTGACTGCTCTCCGCCCTGGCTaGCTCTGCAGGGGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: VYRQYDYYRSRWVPSDLTALRPG*LCRGGP
Trigger: GGGACCACCCCTGCAGAGCCAGCCAGGGCGGAGAGC...AGTCAGGTCTGAGGGAACCCATCGGCTTCTGTAATAATCGTATTGCCTATATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR-3UTR GCA 90 bp GGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGAGCTATCTCCTGGTCTaGTGGGTGGGAGGGTCTCTC +
Preference number: 2 (lower is better)
Translates to: GLSSRRSVCSVVLVWSPQSYLLV*WVGGSL
Trigger: GAGAGACCCTCCCACCCAGCAGACCAGGAGATAGCT...CTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR CAA 90 bp GTAAAGCTTGGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTaGGTTTGGTCTCCACAGCTCTTCGGGGTGGGGTGTGAGTGTGGT +
Preference number: 2 (lower is better)
Translates to: VKLGLSSRRSVCSVV*VWSPQLFGVGCECG
Trigger: ACCACACTCACACCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACCAAGCTTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR-3UTR GCA 90 bp AGGCAAGTCACGCTACTAAATCAAACATTGTTCACAATTTCTGGATCTTCCTCCGCCTCTGCCAAGGAGTaGCAGTGGTTCCCGGGACGG +
Preference number: 2 (lower is better)
Translates to: RQVTLLNQTLFTISGSSSASAKE*QWFPGR
Trigger: CCGTCCCGGGAACCACTGGCACTCCTTGGCAGAGGC...GGAGGAAGATCCAGAAATTGTGAACAATGTTTGATTTAGTAGCGTGACTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR-3UTR CCA 90 bp CCTTTAGTTTTCCCATCCCCATCCTGCTCGTGTAAAGCTTGGTTTATCTTCTCGTATCTCCTGGTCTGCTaGGTGGGAGGGTCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: PLVFPSPSCSCKAWFIFSYLLVC*VGGSLQ
Trigger: CTGGAGAGACCCTCCCACCCAGCAGACCAGGAGATA...CGAGAAGATAAACCAAGCTTTACACGAGCAGGATGGGGATGGGAAAACTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR-3UTR CCA 90 bp TTAATTCAAGTATATAGGCAATACGATTATTACAGAAGCCGATGGGTTCCCTCATCCTGGTCTGCTGGGTaGGAGGGTCTCTCCAGGCCC +
Preference number: 2 (lower is better)
Translates to: LIQVYRQYDYYRSRWVPSSWSAG*EGLSRP
Trigger: GGGCCTGGAGAGACCCTCCCACCCAGCAGACCAGGA...TGAGGGAACCCATCGGCTTCTGTAATAATCGTATTGCCTATATACTTGAATTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR-3UTR CCA 90 bp TTAATTCAAGTATATAGGCAATACGATTATTACAGAAGCCGATGGGTTCCCTCACCTGGGCCTGCTGAATaGGCCACACGCTGCCTGTGT +
Preference number: 2 (lower is better)
Translates to: LIQVYRQYDYYRSRWVPSPGPAE*ATRCLC
Trigger: ACACAGGCAGCGTGTGGCCCATTCAGCAGGCCCAGG...TGAGGGAACCCATCGGCTTCTGTAATAATCGTATTGCCTATATACTTGAATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR-3UTR CCA 90 bp AGGCAAGTCACGCTACTAAATCAAACATTGTTCACAATTTCTGGATCTTCCTCCGCACACGCATGGCCTTaGCCAGACACAAACCAAGAG +
Preference number: 2 (lower is better)
Translates to: RQVTLLNQTLFTISGSSSAHAWP*PDTNQE
Trigger: CTCTTGGTTTGTGTCTGGCCAAGGCCATGCGTGTGC...GGAGGAAGATCCAGAAATTGTGAACAATGTTTGATTTAGTAGCGTGACTTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR-3UTR CCA 90 bp GTATATAGGCAATACGATTATTACAGAAGCCGATGGGTTCCCTCAGACCTGACTACTGGCCTCGTGTCATaGAGAAAAGCATGTGTGTCG +
Preference number: 2 (lower is better)
Translates to: VYRQYDYYRSRWVPSDLTTGLVS*RKACVS
Trigger: CGACACACATGCTTTTCTCCATGACACGAGGCCAGT...AGTCAGGTCTGAGGGAACCCATCGGCTTCTGTAATAATCGTATTGCCTATATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR GCA 72 bp TGGGGCCAGGGTATGGCTCTCCGCCCTGGCTGGCTCTaGAGGGGTGGTCCCTGTTCAAGCCCGCTCCGTGGG +
Preference number: 3 (lower is better)
Translates to: WGQGMALRPGWL*RGGPCSSPLRG
Trigger: CCCACGGAGCGGGCTTGAACAGGGACCACCCCTGCAGAGCCAGCCAGGGCGGAGAGCCATACCCTGGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR GCA 72 bp CCTCCGCCTGGCACTGCAGCTGAGCCTTGGCGGATATaGTCGGGGCCCTCGGCGCAGAGGAACTTGGCCTCG +
Preference number: 3 (lower is better)
Translates to: PPPGTAAEPWRI*SGPSAQRNLAS
Trigger: CGAGGCCAAGTTCCTCTGCGCCGAGGGCCCCGAGCATATCCGCCAAGGCTCAGCTGCAGTGCCAGGCGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR TCA 72 bp GGGCCACAGCGGCCCACCAAAGGCTGCCATCCAAGCTaGGTTCCGCAGGCCTCACCTGCAGCTGGAGAGGGA +
Preference number: 3 (lower is better)
Translates to: GPQRPTKGCHPS*VPQASPAAGEG
Trigger: TCCCTCTCCAGCTGCAGGTGAGGCCTGCGGAACTCAGCTTGGATGGCAGCCTTTGGTGGGCCGCTGTGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR CCA 72 bp CGTGTCATGGAGAAAAGCATGTGTGTCGGGGCGCGCTaGGGCCAGGGTATGGCTCTCCGCCCTGGCTGGCTC +
Preference number: 3 (lower is better)
Translates to: RVMEKSMCVGAR*GQGMALRPGWL
Trigger: GAGCCAGCCAGGGCGGAGAGCCATACCCTGGCCCCAGCGCGCCCCGACACACATGCTTTTCTCCATGACACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR GCA 72 bp GGGAAGGGTGCTGAGAGCCCGCTGTGGCGTGGGTCATaGCTTCTGCACCCCACTTTCCCCAGGCAAGATCCC +
Preference number: 3 (lower is better)
Translates to: GKGAESPLWRGS*LLHPTFPRQDP
Trigger: GGGATCTTGCCTGGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCAGCACCCTTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR CCA 72 bp GACATGGGACGTGGGAAGGGTGCTGAGAGCCCGCTGTaGCGTGGGTCATGCCTTCTGCACCCCACTTTCCCC +
Preference number: 3 (lower is better)
Translates to: DMGRGKGAESPL*RGSCLLHPTFP
Trigger: GGGGAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAGCGGGCTCTCAGCACCCTTCCCACGTCCCATGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR TCA 72 bp ATTTCTGGATCTTCCTCCTCCGCCTGGCACTGCAGCTaGGCCTTGGCGGATATGCTCGGGGCCCTCGGCGCA +
Preference number: 3 (lower is better)
Translates to: ISGSSSSAWHCS*ALADMLGALGA
Trigger: TGCGCCGAGGGCCCCGAGCATATCCGCCAAGGCTCAGCTGCAGTGCCAGGCGGAGGAGGAAGATCCAGAAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR GCA 72 bp GACACCGTCGCATGTTACTTGGAGAGAACAGAGACGTaGGGGCCACAGCGGCCCACCAAAGGCTGCCATCCA +
Preference number: 3 (lower is better)
Translates to: DTVACYLERTET*GPQRPTKGCHP
Trigger: TGGATGGCAGCCTTTGGTGGGCCGCTGTGGCCCGCACGTCTCTGTTCTCTCCAAGTAACATGCGACGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR-3UTR CAA 90 bp GGCGGATATGCTCGGGGCCCTCGGCGCAGAGGAACTTGGCCTCGATTCTCTTCCACCGTCGCATGTTACTaGGAGAGAACAGAGACGTGC +
Preference number: 3 (lower is better)
Translates to: GGYARGPRRRGTWPRFSSTVACY*ERTETC
Trigger: GCACGTCTCTGTTCTCTCCAAGTAACATGCGACGGT...GGAAGAGAATCGAGGCCAAGTTCCTCTGCGCCGAGGGCCCCGAGCATATCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR GCA 72 bp GGGGCATGTGTTTCTCAGAGGGGCTCCATCCGCAGTTaGATGGAACTCCTTACCTGTTTGCCGTCCATCCCC +
Preference number: 3 (lower is better)
Translates to: GACVSQRGSIRS*MELLTCLPSIP
Trigger: GGGGATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGAGAAACACATGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR TCA 72 bp GCTGGAGTCTCTCTGGCCCAGGCTAAGGGAGGGGAATaGAGTAGTTCGCTCTCCACTCCAGAGGTTTGCTCT +
Preference number: 3 (lower is better)
Translates to: AGVSLAQAKGGE*SSSLSTPEVCS
Trigger: AGAGCAAACCTCTGGAGTGGAGAGCGAACTACTTCATTCCCCTCCCTTAGCCTGGGCCAGAGAGACTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618035.4
3UTR CCA 72 bp CATGTGTTTCTCAGAGGGGCTCCATCCGCAGTTGCATaGAACTCCTTACCTGTTTGCCGTCCATCCCCCGGA +
Preference number: 3 (lower is better)
Translates to: HVFLRGAPSAVA*NSLPVCRPSPG
Trigger: TCCGGGGGATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGAGAAACACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR CCA 72 bp CACTTTCCCCAGGCAAGATCCCTGGGCGCCCTTATTTaGGGGGATGTTGATCCCGAGGGAGGAGTATTTGGA +
Preference number: 3 (lower is better)
Translates to: HFPQARSLGALI*GDVDPEGGVFG
Trigger: TCCAAATACTCCTCCCTCGGGATCAACATCCCCCCAAATAAGGGCGCCCAGGGATCTTGCCTGGGGAAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR GCA 72 bp ACACGCATGGCCTTGGCCAGACACAAACCAAGAGACTaGCATGACAGACAGAGCAGAAACCTCCCGAGCACT +
Preference number: 3 (lower is better)
Translates to: TRMALARHKPRD*HDRQSRNLPST
Trigger: AGTGCTCGGGAGGTTTCTGCTCTGTCTGTCATGGCAGTCTCTTGGTTTGTGTCTGGCCAAGGCCATGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR CCA 72 bp TCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTaGTCTCCACAGCTCTTCGGGGTGGGGTGTGAGTGT +
Preference number: 3 (lower is better)
Translates to: SSRRSVCSVVLV*SPQLFGVGCEC
Trigger: ACACTCACACCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR TCA 72 bp CTAAGCTTTCCTAAGACGGGCTTCTCAGGCGAGACGTaGCACCAGACACCGTCGCATGTTACTTGGAGAGAA +
Preference number: 3 (lower is better)
Translates to: LSFPKTGFSGET*HQTPSHVTWRE
Trigger: TTCTCTCCAAGTAACATGCGACGGTGTCTGGTGTCACGTCTCGCCTGAGAAGCCCGTCTTAGGAAAGCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR CCA 72 bp AGTCACGCTACTAAATCAAACATTGTTCACAATTTCTaGATCTTCCTCCTCCGCCTGGCACTGCAGCTGAGC +
Preference number: 3 (lower is better)
Translates to: SHATKSNIVHNF*IFLLRLALQLS
Trigger: GCTCAGCTGCAGTGCCAGGCGGAGGAGGAAGATCCAGAAATTGTGAACAATGTTTGATTTAGTAGCGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR-3UTR CAA 90 bp AGGCAAGTCACGCTACTAAATCAAACATTGTTCACAATTTCTGGATCTTCCTCCGGCACACGCATGGCCTaGGCCAGACACAAACCAAGA +
Preference number: 3 (lower is better)
Translates to: RQVTLLNQTLFTISGSSSGTRMA*ARHKPR
Trigger: TCTTGGTTTGTGTCTGGCCAAGGCCATGCGTGTGCC...GGAGGAAGATCCAGAAATTGTGAACAATGTTTGATTTAGTAGCGTGACTTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR-3UTR CAA 90 bp GTATATAGGCAATACGATTATTACAGAAGCCGATGGGTTCCCTCAGACCTGACTGTGTGTAGCGTAGTCTaGGTTTGGTCTCCACAGCTC +
Preference number: 3 (lower is better)
Translates to: VYRQYDYYRSRWVPSDLTVCSVV*VWSPQL
Trigger: GAGCTGTGGAGACCAAACCAAGACTACGCTACACAC...AGTCAGGTCTGAGGGAACCCATCGGCTTCTGTAATAATCGTATTGCCTATATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR-3UTR CAA 90 bp TTAATTCAAGTATATAGGCAATACGATTATTACAGAAGCCGATGGGTTCCCTCAGGGCTCCATCCGCAGTaGCATGGAACTCCTTACCTG +
Preference number: 3 (lower is better)
Translates to: LIQVYRQYDYYRSRWVPSGLHPQ*HGTPYL
Trigger: CAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCC...TGAGGGAACCCATCGGCTTCTGTAATAATCGTATTGCCTATATACTTGAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR GCA 90 bp TGGCCACGCGCTGGCCTCTGCCAAGGAGTGCCAGTGGTTCCCGGGACGGGGCCGGAGCCTTGGCGGATATaGTCGGGGCCCTCGGCGCAG +
Preference number: 4 (lower is better)
Translates to: WPRAGLCQGVPVVPGTGPEPWRI*SGPSAQ
Trigger: CTGCGCCGAGGGCCCCGAGCATATCCGCCAAGGCTC...CGGCCCCGTCCCGGGAACCACTGGCACTCCTTGGCAGAGGCCAGCGCGTGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp GCGCTGGCCTCTGCCAAGGAGTGCCAGTGGTTCCCGGGACGGGGCCGCCCAAGCGCCCGGGCCCGGAGCTaGGCACCACAAAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: ALASAKECQWFPGRGRPSARARS*APQRKA
Trigger: TGCCTTCCTTTGTGGTGCCCAGCTCCGGGCCCGGGC...GCTTGGGCGGCCCCGTCCCGGGAACCACTGGCACTCCTTGGCAGAGGCCAGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR GCA 90 bp GCCGTCTGCCCTTGTCCCCCAGCTATCTCCTGGTCTGCTGGGTGGGAGGGTCTCCTCCGCCTCGGCTTCTaGCGCTTCGCGCCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: AVCPCPPAISWSAGWEGLLRLGF*RFAPAP
Trigger: CGGAGCCGGCGCGAAGCGGCAGAAGCCGAGGCGGAG...GAGACCCTCCCACCCAGCAGACCAGGAGATAGCTGGGGGACAAGGGCAGACGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR GCA 90 bp TGGCCACGCGCTGGCCTCTGCCAAGGAGTGCCAGTGGTTCCCGGGACGGGGCCGCCACGCGCTGGCCTCTaGCAAGGAGTGCCAGTGGTT +
Preference number: 4 (lower is better)
Translates to: WPRAGLCQGVPVVPGTGPPRAGL*QGVPVV
Trigger: AACCACTGGCACTCCTTGGCAGAGGCCAGCGCGTGG...CGGCCCCGTCCCGGGAACCACTGGCACTCCTTGGCAGAGGCCAGCGCGTGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR GCA 90 bp TGGCCACGCGCTGGCCTCTGCCAAGGAGTGCCAGTGGTTCCCGGGACGGGGCCGGACAGAGCGTCACACTaGACGCAGGGTCCTCCGCCA +
Preference number: 4 (lower is better)
Translates to: WPRAGLCQGVPVVPGTGPDRASH*TQGPPP
Trigger: TGGCGGAGGACCCTGCGTGCAGTGTGACGCTCTGTC...CGGCCCCGTCCCGGGAACCACTGGCACTCCTTGGCAGAGGCCAGCGCGTGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp TGGCCACGCGCTGGCCTCTGCCAAGGAGTGCCAGTGGTTCCCGGGACGGGGCCGGCGGACAGCTCCAGATaGAATCCCAGGCCACGGTGC +
Preference number: 4 (lower is better)
Translates to: WPRAGLCQGVPVVPGTGPADSSR*NPRPRC
Trigger: GCACCGTGGCCTGGGATTCCATCTGGAGCTGTCCGC...CGGCCCCGTCCCGGGAACCACTGGCACTCCTTGGCAGAGGCCAGCGCGTGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp TGGCCACGCGCTGGCCTCTGCCAAGGAGTGCCAGTGGTTCCCGGGACGGGGCCGACTGCAGCTGAGCCTTaGCGGATATGCTCGGGGCCC +
Preference number: 4 (lower is better)
Translates to: WPRAGLCQGVPVVPGTGPTAAEP*RICSGP
Trigger: GGGCCCCGAGCATATCCGCCAAGGCTCAGCTGCAGT...CGGCCCCGTCCCGGGAACCACTGGCACTCCTTGGCAGAGGCCAGCGCGTGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR TCA 90 bp TGGCCACGCGCTGGCCTCTGCCAAGGAGTGCCAGTGGTTCCCGGGACGGGGCCGAGGCAGGGAGACGGGTaGGGGCTCCAACACATACTC +
Preference number: 4 (lower is better)
Translates to: WPRAGLCQGVPVVPGTGPRQGDG*GLQHIL
Trigger: GAGTATGTGTTGGAGCCCTCACCCGTCTCCCTGCCT...CGGCCCCGTCCCGGGAACCACTGGCACTCCTTGGCAGAGGCCAGCGCGTGGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR TCA 90 bp GCGCTGGCCTCTGCCAAGGAGTGCCAGTGGTTCCCGGGACGGGGCCGCCCAAGCCCTGTGTGGAGTCAGTaGCAGAGGCCAGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: ALASAKECQWFPGRGRPSPVWSQ*QRPAAG
Trigger: ACCTGCAGCTGGCCTCTGTCACTGACTCCACACAGG...GCTTGGGCGGCCCCGTCCCGGGAACCACTGGCACTCCTTGGCAGAGGCCAGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR GCA 90 bp CAGCAGCCTCACCCTGAAGACCTGGGCCTGCTGAATGGGCCACACGCTGCCTGTCCGCTCCGTGGGAGCTaGCCCCTGGGGACCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QQPHPEDLGLLNGPHAACPLRGS*PLGTLL
Trigger: GAGCAGGGTCCCCAGGGGGCAGCTCCCACGGAGCGG...ACAGGCAGCGTGTGGCCCATTCAGCAGGCCCAGGTCTTCAGGGTGAGGCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp CTGGCCACGCGCTGGCCTCTGCCAAGGAGTGCCAGTGGTTCCCGGGACGGGGCCGCGACCTGGACCACCTaGCCATCGAAGTCCTGCATC +
Preference number: 4 (lower is better)
Translates to: LATRWPLPRSASGSRDGAATWTT*PSKSCI
Trigger: GATGCAGGACTTCGATGGCCAGGTGGTCCAGGTCGC...GGCCCCGTCCCGGGAACCACTGGCACTCCTTGGCAGAGGCCAGCGCGTGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp CCTGGCTGGCTCTGCAGGGGTGGTCCCTGTTCAAGCCCGCTCCGTGGGAGCTGCTCCTGGTCTGCTGGGTaGGAGGGTCTCTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PGWLCRGGPCSSPLRGSCSWSAG*EGLSRP
Trigger: GGGCCTGGAGAGACCCTCCCACCCAGCAGACCAGGA...GCAGCTCCCACGGAGCGGGCTTGAACAGGGACCACCCCTGCAGAGCCAGCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp GCCGTCTGCCCTTGTCCCCCAGCTATCTCCTGGTCTGCTGGGTGGGAGGGTCTCGCTCTCCGCCCTGGCTaGCTCTGCAGGGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: AVCPCPPAISWSAGWEGLALRPG*LCRGGP
Trigger: GGGACCACCCCTGCAGAGCCAGCCAGGGCGGAGAGC...GAGACCCTCCCACCCAGCAGACCAGGAGATAGCTGGGGGACAAGGGCAGACGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp GGCCGTCTGCCCTTGTCCCCCAGCTATCTCCTGGTCTGCTGGGTGGGAGGGTCTTTCAAGCCCGCTCCGTaGGAGCTGCCCCCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: GRLPLSPSYLLVCWVGGSFKPAP*ELPPGD
Trigger: GTCCCCAGGGGGCAGCTCCCACGGAGCGGGCTTGAA...AGACCCTCCCACCCAGCAGACCAGGAGATAGCTGGGGGACAAGGGCAGACGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp CGCCTAAGCTGGGGCTCGGTCCGAGGCACACGCATGGCCTTGGCCAGACACAAAGCGCCCCCGAGAAGCTaGAGCCCCACACGAAGACGC +
Preference number: 4 (lower is better)
Translates to: RLSWGSVRGTRMALARHKAPPRS*SPTRRR
Trigger: GCGTCTTCGTGTGGGGCTTCAGCTTCTCGGGGGCGC...TTTGTGTCTGGCCAAGGCCATGCGTGTGCCTCGGACCGAGCCCCAGCTTAGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR TCA 90 bp CAGCCTCACCCTGAAGACCTGGGCCTGCTGAATGGGCCACACGCTGCCTGTGTCGCGCCCCCGAGAAGCTaGAGCCCCACACGAAGACGC +
Preference number: 4 (lower is better)
Translates to: QPHPEDLGLLNGPHAACVAPPRS*SPTRRR
Trigger: GCGTCTTCGTGTGGGGCTTCAGCTTCTCGGGGGCGC...GACACAGGCAGCGTGTGGCCCATTCAGCAGGCCCAGGTCTTCAGGGTGAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR GCA 90 bp CCTAAGCTGGGGCTCGGTCCGAGGCACACGCATGGCCTTGGCCAGACACAAACCGCCCGTGCCACCGCATaGAGCCTGTCGCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: PKLGLGPRHTHGLGQTQTARATA*SLSHLP
Trigger: GGGAAGGTGCGACAGGCTGCATGCGGTGGCACGGGC...GGTTTGTGTCTGGCCAAGGCCATGCGTGTGCCTCGGACCGAGCCCCAGCTTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp CAGCCTCACCCTGAAGACCTGGGCCTGCTGAATGGGCCACACGCTGCCTGTGTCCGCCTCAGCAGCCTCTaGGCGCCGCCATCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: QPHPEDLGLLNGPHAACVRLSSL*APPSCV
Trigger: CACGCAAGATGGCGGCGCCCAGAGGCTGCTGAGGCG...GACACAGGCAGCGTGTGGCCCATTCAGCAGGCCCAGGTCTTCAGGGTGAGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR GCA 90 bp GGCGGATATGCTCGGGGCCCTCGGCGCAGAGGAACTTGGCCTCGATTCTCTTCCGTGGTCCACGCCACATaGCACGTCCACAGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GGYARGPRRRGTWPRFSSVVHAT*HVHRLP
Trigger: GGGGAGCCTGTGGACGTGGCATGTGGCGTGGACCAC...GGAAGAGAATCGAGGCCAAGTTCCTCTGCGCCGAGGGCCCCGAGCATATCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR GCA 90 bp GGCGGATATGCTCGGGGCCCTCGGCGCAGAGGAACTTGGCCTCGATTCTCTTCCGCCTCTGCCAAGGAGTaGCAGTGGTTCCCGGGACGG +
Preference number: 4 (lower is better)
Translates to: GGYARGPRRRGTWPRFSSASAKE*QWFPGR
Trigger: CCGTCCCGGGAACCACTGGCACTCCTTGGCAGAGGC...GGAAGAGAATCGAGGCCAAGTTCCTCTGCGCCGAGGGCCCCGAGCATATCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp CTGGCCACGCGCTGGCCTCTGCCAAGGAGTGCCAGTGGTTCCCGGGACGGGGCCCTCCATGGGAAATACTaGTCCTCCAGGCGACCGATT +
Preference number: 4 (lower is better)
Translates to: LATRWPLPRSASGSRDGALHGKY*SSRRPI
Trigger: AATCGGTCGCCTGGAGGACCAGTATTTCCCATGGAG...GGCCCCGTCCCGGGAACCACTGGCACTCCTTGGCAGAGGCCAGCGCGTGGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp CGCCTAAGCTGGGGCTCGGTCCGAGGCACACGCATGGCCTTGGCCAGACACAAACTCCCTCGCCTAAGCTaGGGCTCGGTCCGAGGCACA +
Preference number: 4 (lower is better)
Translates to: RLSWGSVRGTRMALARHKLPRLS*GSVRGT
Trigger: TGTGCCTCGGACCGAGCCCCAGCTTAGGCGAGGGAG...TTTGTGTCTGGCCAAGGCCATGCGTGTGCCTCGGACCGAGCCCCAGCTTAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp CAGCAGCCTCACCCTGAAGACCTGGGCCTGCTGAATGGGCCACACGCTGCCTGTGTGGGCCTGTTGTCTTaGCGCTGGCGGATGGGGCAG +
Preference number: 4 (lower is better)
Translates to: QQPHPEDLGLLNGPHAACVGLLS*RWRMGQ
Trigger: CTGCCCCATCCGCCAGCGCCAAGACAACAGGCCCAC...ACAGGCAGCGTGTGGCCCATTCAGCAGGCCCAGGTCTTCAGGGTGAGGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp GCCGTCTGCCCTTGTCCCCCAGCTATCTCCTGGTCTGCTGGGTGGGAGGGTCTCGCTGAGAGCCCGCTGTaGCGTGGGTCATGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: AVCPCPPAISWSAGWEGLAESPL*RGSCLL
Trigger: CAGAAGGCATGACCCACGCCACAGCGGGCTCTCAGC...GAGACCCTCCCACCCAGCAGACCAGGAGATAGCTGGGGGACAAGGGCAGACGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp CCTAAGCTGGGGCTCGGTCCGAGGCACACGCATGGCCTTGGCCAGACACAAACCGCAGGGTGGCCTGAATaGAAACCGAGGGCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: PKLGLGPRHTHGLGQTQTAGWPE*KPRAEA
Trigger: GGCTTCGGCCCTCGGTTTTCATTCAGGCCACCCTGC...GGTTTGTGTCTGGCCAAGGCCATGCGTGTGCCTCGGACCGAGCCCCAGCTTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR TCA 90 bp GGCGGATATGCTCGGGGCCCTCGGCGCAGAGGAACTTGGCCTCGATTCTCTTCCGCCTGGCACTGCAGCTaGGCCTTGGCGGATATGCTC +
Preference number: 4 (lower is better)
Translates to: GGYARGPRRRGTWPRFSSAWHCS*ALADML
Trigger: GAGCATATCCGCCAAGGCTCAGCTGCAGTGCCAGGC...GGAAGAGAATCGAGGCCAAGTTCCTCTGCGCCGAGGGCCCCGAGCATATCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR GCA 90 bp ACACCAGACACCGTCGCATGTTACTTGGAGAGAACAGAGACGTGCGGGCCACAGCTCCGCCTCGGCTTCTaGCGCTTCGCGCCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: TPDTVACYLERTETCGPQLRLGF*RFAPAP
Trigger: CGGAGCCGGCGCGAAGCGGCAGAAGCCGAGGCGGAG...CTGTGGCCCGCACGTCTCTGTTCTCTCCAAGTAACATGCGACGGTGTCTGGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR GCA 90 bp CTGGCCACGCGCTGGCCTCTGCCAAGGAGTGCCAGTGGTTCCCGGGACGGGGCCTCCTTTGTTGGTCAGTaGAGCAAAGTGGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LATRWPLPRSASGSRDGASFVGQ*SKVAES
Trigger: GGACTCAGCCACTTTGCTGCACTGACCAACAAAGGA...GGCCCCGTCCCGGGAACCACTGGCACTCCTTGGCAGAGGCCAGCGCGTGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR GCA 90 bp GCCGTCTGCCCTTGTCCCCCAGCTATCTCCTGGTCTGCTGGGTGGGAGGGTCTCGGCGGATGGGGCAGGTaGCCTCCATGGGAAATACTG +
Preference number: 4 (lower is better)
Translates to: AVCPCPPAISWSAGWEGLGGWGR*PPWEIL
Trigger: CAGTATTTCCCATGGAGGGCACCTGCCCCATCCGCC...GAGACCCTCCCACCCAGCAGACCAGGAGATAGCTGGGGGACAAGGGCAGACGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp CCTAAGCTGGGGCTCGGTCCGAGGCACACGCATGGCCTTGGCCAGACACAAACCGCCAGGGTCACCATGTaGTCCACGCCACATGCCACG +
Preference number: 4 (lower is better)
Translates to: PKLGLGPRHTHGLGQTQTARVTM*STPHAT
Trigger: CGTGGCATGTGGCGTGGACCACATGGTGACCCTGGC...GGTTTGTGTCTGGCCAAGGCCATGCGTGTGCCTCGGACCGAGCCCCAGCTTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR TCA 90 bp GTCTGCCCTTGTCCCCCAGCTATCTCCTGGTCTGCTGGGTGGGAGGGTCTCTCCAGGCAGGGAGACGGGTaGGGGCTCCAACACATACTC +
Preference number: 4 (lower is better)
Translates to: VCPCPPAISWSAGWEGLSRQGDG*GLQHIL
Trigger: GAGTATGTGTTGGAGCCCTCACCCGTCTCCCTGCCT...GGAGAGACCCTCCCACCCAGCAGACCAGGAGATAGCTGGGGGACAAGGGCAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp GTCTGCCCTTGTCCCCCAGCTATCTCCTGGTCTGCTGGGTGGGAGGGTCTCTCCCCTGTGTGGAGTCAGTaGCAGAGGCCAGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VCPCPPAISWSAGWEGLSPVWSQ*QRPAAG
Trigger: ACCTGCAGCTGGCCTCTGTCACTGACTCCACACAGG...GGAGAGACCCTCCCACCCAGCAGACCAGGAGATAGCTGGGGGACAAGGGCAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp CAGCAGCCTCACCCTGAAGACCTGGGCCTGCTGAATGGGCCACACGCTGCCTGTCGCCGCCATCTTGCGTaGCCCTTAACACCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: QQPHPEDLGLLNGPHAACRRHLA*PLTPVL
Trigger: GAGGACTGGTGTTAAGGGTCACGCAAGATGGCGGCG...ACAGGCAGCGTGTGGCCCATTCAGCAGGCCCAGGTCTTCAGGGTGAGGCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR GCA 90 bp TTTTTGGCTGGAGAAGGCAGAGCTGGAGTCTCTCTGGCCCAGGCTAAGGGAGGGGCCCGTGCCACCGCATaGAGCCTGTCGCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: FLAGEGRAGVSLAQAKGGARATA*SLSHLP
Trigger: GGGAAGGTGCGACAGGCTGCATGCGGTGGCACGGGC...CCCTCCCTTAGCCTGGGCCAGAGAGACTCCAGCTCTGCCTTCTCCAGCCAAAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR CCA 90 bp GTCTGCCCTTGTCCCCCAGCTATCTCCTGGTCTGCTGGGTGGGAGGGTCTCTCCGCGACCTGGACCACCTaGCCATCGAAGTCCTGCATC +
Preference number: 4 (lower is better)
Translates to: VCPCPPAISWSAGWEGLSATWTT*PSKSCI
Trigger: GATGCAGGACTTCGATGGCCAGGTGGTCCAGGTCGC...GGAGAGACCCTCCCACCCAGCAGACCAGGAGATAGCTGGGGGACAAGGGCAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp GAGAAGGCAGAGCTGGAGTCTCTCTGGCCCAGGCTAAGGGAGGGGAATGAAGTAGCGCCCCCGAGAAGCTaGAGCCCCACACGAAGACGC +
Preference number: 4 (lower is better)
Translates to: EKAELESLWPRLREGNEVAPPRS*SPTRRR
Trigger: GCGTCTTCGTGTGGGGCTTCAGCTTCTCGGGGGCGC...TACTTCATTCCCCTCCCTTAGCCTGGGCCAGAGAGACTCCAGCTCTGCCTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR TCA 90 bp CCTAAGCTGGGGCTCGGTCCGAGGCACACGCATGGCCTTGGCCAGACACAAACCTTCTCAGGCGAGACGTaGCACCAGACACCGTCGCAT +
Preference number: 4 (lower is better)
Translates to: PKLGLGPRHTHGLGQTQTFSGET*HQTPSH
Trigger: ATGCGACGGTGTCTGGTGTCACGTCTCGCCTGAGAA...GGTTTGTGTCTGGCCAAGGCCATGCGTGTGCCTCGGACCGAGCCCCAGCTTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR GCA 90 bp GGCGGATATGCTCGGGGCCCTCGGCGCAGAGGAACTTGGCCTCGATTCTCTTCCGTGACAGAGGCCAGCTaGAGGTACTCCGAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: GGYARGPRRRGTWPRFSSVTEAS*RYSEFP
Trigger: GGGAAACTCGGAGTACCTGCAGCTGGCCTCTGTCAC...GGAAGAGAATCGAGGCCAAGTTCCTCTGCGCCGAGGGCCCCGAGCATATCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR GCA 90 bp GTCTGCCCTTGTCCCCCAGCTATCTCCTGGTCTGCTGGGTGGGAGGGTCTCTCCGTGACAGAGGCCAGCTaGAGGTACTCCGAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: VCPCPPAISWSAGWEGLSVTEAS*RYSEFP
Trigger: GGGAAACTCGGAGTACCTGCAGCTGGCCTCTGTCAC...GGAGAGACCCTCCCACCCAGCAGACCAGGAGATAGCTGGGGGACAAGGGCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR GCA 90 bp GGTAGGTACCCGCTAAGGGATTCAGGACAGAGCGTCACACTGCACGCAGGGTCCTCCGCAGGCCTCACCTaGAGCTGGAGAGGGACCTTG +
Preference number: 4 (lower is better)
Translates to: GRYPLRDSGQSVTLHAGSSAGLT*SWRGTL
Trigger: CAAGGTCCCTCTCCAGCTGCAGGTGAGGCCTGCGGA...GGACCCTGCGTGCAGTGTGACGCTCTGTCCTGAATCCCTTAGCGGGTACCTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp GCGAGACGTGACACCAGACACCGTCGCATGTTACTTGGAGAGAACAGAGACGTGCGCTCGCCCACGTACTaGACCACGGGCACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: ARRDTRHRRMLLGENRDVRSPTY*TTGTSA
Trigger: GGCGGAGGTGCCCGTGGTCCAGTACGTGGGCGAGCG...CACGTCTCTGTTCTCTCCAAGTAACATGCGACGGTGTCTGGTGTCACGTCTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
3UTR CAA 72 bp AGGCGAGACGTGACACCAGACACCGTCGCATGTTACTaGGAGAGAACAGAGACGTGCGGGCCACAGCGGCCC +
Preference number: 4 (lower is better)
Translates to: RRDVTPDTVACY*ERTETCGPQRP
Trigger: GGGCCGCTGTGGCCCGCACGTCTCTGTTCTCTCCAAGTAACATGCGACGGTGTCTGGTGTCACGTCTCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR TCA 90 bp CAGCAGCCTCACCCTGAAGACCTGGGCCTGCTGAATGGGCCACACGCTGCCTGTTGGTGGGCGAGCTGGTaGTATTGTAGTGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: QQPHPEDLGLLNGPHAACWWASW*YCSDPD
Trigger: GTCTGGGTCACTACAATATCACCAGCTCGCCCACCA...ACAGGCAGCGTGTGGCCCATTCAGCAGGCCCAGGTCTTCAGGGTGAGGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp TTGGCTGGAGAAGGCAGAGCTGGAGTCTCTCTGGCCCAGGCTAAGGGAGGGGAACCTGTGTGGAGTCAGTaGCAGAGGCCAGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LAGEGRAGVSLAQAKGGEPVWSQ*QRPAAG
Trigger: ACCTGCAGCTGGCCTCTGTCACTGACTCCACACAGG...TTCCCCTCCCTTAGCCTGGGCCAGAGAGACTCCAGCTCTGCCTTCTCCAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR GCA 90 bp CTGGAGAAGGCAGAGCTGGAGTCTCTCTGGCCCAGGCTAAGGGAGGGGAATGAAACACTGCACAGCCCGTaGCACCGCATGCAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LEKAELESLWPRLREGNETLHSP*HRMQPV
Trigger: GACAGGCTGCATGCGGTGGCACGGGCTGTGCAGTGT...TTCATTCCCCTCCCTTAGCCTGGGCCAGAGAGACTCCAGCTCTGCCTTCTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR GCA 90 bp CAGCAGCCTCACCCTGAAGACCTGGGCCTGCTGAATGGGCCACACGCTGCCTGTAACTCCTTACCTGTTTaGCGTCCATCCCCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: QQPHPEDLGLLNGPHAACNSLPV*RPSPGG
Trigger: ACCTCCGGGGGATGGACGGCAAACAGGTAAGGAGTT...ACAGGCAGCGTGTGGCCCATTCAGCAGGCCCAGGTCTTCAGGGTGAGGCTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp TGGCCCAGGCTAAGGGAGGGGAATGAAGTAGTTCGCTCTCCACTCCAGAGGTTTCGCCTCAGCAGCCTCTaGGCGCCGCCATCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: WPRLREGNEVVRSPLQRFRLSSL*APPSCV
Trigger: CACGCAAGATGGCGGCGCCCAGAGGCTGCTGAGGCG...AAACCTCTGGAGTGGAGAGCGAACTACTTCATTCCCCTCCCTTAGCCTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR CCA 90 bp TGGCCCAGGCTAAGGGAGGGGAATGAAGTAGTTCGCTCTCCACTCCAGAGGTTTGCCCGGGCCCGGAGCTaGGCACCACAAAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: WPRLREGNEVVRSPLQRFARARS*APQRKA
Trigger: TGCCTTCCTTTGTGGTGCCCAGCTCCGGGCCCGGGC...AAACCTCTGGAGTGGAGAGCGAACTACTTCATTCCCCTCCCTTAGCCTGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR CCA 90 bp CTGCAGCTGAGCCTTGGCGGATATGCTCGGGGCCCTCGGCGCAGAGGAACTTGGGTCAGTGCAGCAAAGTaGCTGAGTCCACATCGGATG +
Preference number: 4 (lower is better)
Translates to: LQLSLGGYARGPRRRGTWVSAAK*LSPHRM
Trigger: CATCCGATGTGGACTCAGCCACTTTGCTGCACTGAC...CCAAGTTCCTCTGCGCCGAGGGCCCCGAGCATATCCGCCAAGGCTCAGCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp TCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCCGTCCATTGTGTCGGGGCGCGCTaGGGCCAGGGTATGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SEGLHPQLHGTPYLFAVHCVGAR*GQGMAL
Trigger: GAGAGCCATACCCTGGCCCCAGCGCGCCCCGACACA...ATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR GCA 90 bp GTGTTTCTCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCGCCCGTGCCACCGCATaGAGCCTGTCGCACCTTCCC +
Preference number: 4 (lower is better)
Translates to: VFLRGAPSAVAWNSLPVCARATA*SLSHLP
Trigger: GGGAAGGTGCGACAGGCTGCATGCGGTGGCACGGGC...GCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGAGAAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR GCA 90 bp CTAAGACGGGCTTCTCAGGCGAGACGTGACACCAGACACCGTCGCATGTTACTTGAGAGAACAGAGACGTaGGGGCCACAGCGGCCCACC +
Preference number: 4 (lower is better)
Translates to: LRRASQARRDTRHRRMLLERTET*GPQRPT
Trigger: GGTGGGCCGCTGTGGCCCGCACGTCTCTGTTCTCTC...AAGTAACATGCGACGGTGTCTGGTGTCACGTCTCGCCTGAGAAGCCCGTCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp TGTGTTTCTCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCGCTCGCCCACGTACTaGACCACGGGCACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: CVSQRGSIRSCMELLTCLRSPTY*TTGTSA
Trigger: GGCGGAGGTGCCCGTGGTCCAGTACGTGGGCGAGCG...CAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGAGAAACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp GTGTTTCTCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCGCCCGGGCCCGGAGCTaGGCACCACAAAGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VFLRGAPSAVAWNSLPVCARARS*APQRKA
Trigger: TGCCTTCCTTTGTGGTGCCCAGCTCCGGGCCCGGGC...GCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGAGAAACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp CTGGAGAAGGCAGAGCTGGAGTCTCTCTGGCCCAGGCTAAGGGAGGGGAATGAAGCGACCTGGACCACCTaGCCATCGAAGTCCTGCATC +
Preference number: 4 (lower is better)
Translates to: LEKAELESLWPRLREGNEATWTT*PSKSCI
Trigger: GATGCAGGACTTCGATGGCCAGGTGGTCCAGGTCGC...TTCATTCCCCTCCCTTAGCCTGGGCCAGAGAGACTCCAGCTCTGCCTTCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR CCA 90 bp CAGCCTCACCCTGAAGACCTGGGCCTGCTGAATGGGCCACACGCTGCCTGTGTCCTCCATGGGAAATACTaGTCCTCCAGGCGACCGATT +
Preference number: 4 (lower is better)
Translates to: QPHPEDLGLLNGPHAACVLHGKY*SSRRPI
Trigger: AATCGGTCGCCTGGAGGACCAGTATTTCCCATGGAG...GACACAGGCAGCGTGTGGCCCATTCAGCAGGCCCAGGTCTTCAGGGTGAGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp GTCTGCCCTTGTCCCCCAGCTATCTCCTGGTCTGCTGGGTGGGAGGGTCTCTCCGGCCACTTTTACTCCTaGTTGAAGGCAAAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: VCPCPPAISWSAGWEGLSGHFYS*LKAKAL
Trigger: CAGCGCCTTTGCCTTCAACCAGGAGTAAAAGTGGCC...GGAGAGACCCTCCCACCCAGCAGACCAGGAGATAGCTGGGGGACAAGGGCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp TCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCCGTCCATCTGTTGTCTTGGCGCTaGCGGATGGGGCAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SEGLHPQLHGTPYLFAVHLLSWR*RMGQVP
Trigger: GGGCACCTGCCCCATCCGCCAGCGCCAAGACAACAG...ATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp CATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCCGTCCATCCCCCGGAGGTACCCCCAGCTATCTCCTaGTCTGCTGGGTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: HPQLHGTPYLFAVHPPEVPPAIS*SAGWEG
Trigger: ACCCTCCCACCCAGCAGACCAGGAGATAGCTGGGGG...TACCTCCGGGGGATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR CAA 72 bp TGGCGGATATGCTCGGGGCCCTCGGCGCAGAGGAACTaGGCCTCGATTCTCTTCCTGAGGGGCTTCTTAACT +
Preference number: 4 (lower is better)
Translates to: WRICSGPSAQRN*ASILFLRGFLT
Trigger: AGTTAAGAAGCCCCTCAGGAAGAGAATCGAGGCCAAGTTCCTCTGCGCCGAGGGCCCCGAGCATATCCGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR TCA 90 bp GTCTGCCCTTGTCCCCCAGCTATCTCCTGGTCTGCTGGGTGGGAGGGTCTCTCCGCTGAGAATCTTTGTTaGGTCCCATCCCCCAGACTT +
Preference number: 4 (lower is better)
Translates to: VCPCPPAISWSAGWEGLSAENLC*VPSPRL
Trigger: AAGTCTGGGGGATGGGACTCAACAAAGATTCTCAGC...GGAGAGACCCTCCCACCCAGCAGACCAGGAGATAGCTGGGGGACAAGGGCAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp GAGAAGGCAGAGCTGGAGTCTCTCTGGCCCAGGCTAAGGGAGGGGAATGAAGTAGTCAACACAAGAGAGTaGGCTCGGCCGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: EKAELESLWPRLREGNEVVNTRE*ARPQET
Trigger: GGTCTCCTGCGGCCGAGCTCACTCTCTTGTGTTGAC...TACTTCATTCCCCTCCCTTAGCCTGGGCCAGAGAGACTCCAGCTCTGCCTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR TCA 90 bp GGTAGGTACCCGCTAAGGGATTCAGGACAGAGCGTCACACTGCACGCAGGGTCCTGGTGGGCGAGCTGGTaGTATTGTAGTGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: GRYPLRDSGQSVTLHAGSWWASW*YCSDPD
Trigger: GTCTGGGTCACTACAATATCACCAGCTCGCCCACCA...GGACCCTGCGTGCAGTGTGACGCTCTGTCCTGAATCCCTTAGCGGGTACCTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR TCA 90 bp GTCTGCCCTTGTCCCCCAGCTATCTCCTGGTCTGCTGGGTGGGAGGGTCTCTCCCCTGGATTTCTGGGTTaGACTCCGTCAAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: VCPCPPAISWSAGWEGLSPGFLG*TPSSQR
Trigger: TCTTTGGCTTGACGGAGTTCAACCCAGAAATCCAGG...GGAGAGACCCTCCCACCCAGCAGACCAGGAGATAGCTGGGGGACAAGGGCAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp TCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCCGTCCATAAGACCTGGGCCTGCTaGATGGGCCACACGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SEGLHPQLHGTPYLFAVHKTWAC*MGHTLP
Trigger: AGGCAGCGTGTGGCCCATTCAGCAGGCCCAGGTCTT...ATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR GCA 90 bp TCTCTTCCTGAGGGGCTTCTTAACTTTTCCAAGCCAGGCAGTGAGCGTGGTGGGGCTGGGGCTGGTGCCTaGGGACAGCTCCAGATGGAA +
Preference number: 4 (lower is better)
Translates to: SLPEGLLNFSKPGSERGGAGAGA*GQLQME
Trigger: TTCCATCTGGAGCTGTCCGCAGGCACCAGCCCCAGC...CCCACCACGCTCACTGCCTGGCTTGGAAAAGTTAAGAAGCCCCTCAGGAAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR GCA 90 bp GTGTTTCTCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCCAGGCAGGGGCCGTCTaGCCTTGTCCCCCAGCTATC +
Preference number: 4 (lower is better)
Translates to: VFLRGAPSAVAWNSLPVCQAGAV*PCPPAI
Trigger: GATAGCTGGGGGACAAGGGCAGACGGCCCCTGCCTG...GCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGAGAAACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp AGAGACTGCCATGACAGACAGAGCAGAAACCTCCCGAGCACTGTGTTCAAGCTACGCCTCAGCAGCCTCTaGGCGCCGCCATCTTGCGTG +
Preference number: 4 (lower is better)
Translates to: RDCHDRQSRNLPSTVFKLRLSSL*APPSCV
Trigger: CACGCAAGATGGCGGCGCCCAGAGGCTGCTGAGGCG...TAGCTTGAACACAGTGCTCGGGAGGTTTCTGCTCTGTCTGTCATGGCAGTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR TCA 90 bp CTAAGACGGGCTTCTCAGGCGAGACGTGACACCAGACACCGTCGCATGTTACTTGTCAACACAAGAGAGTaGGCTCGGCCGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: LRRASQARRDTRHRRMLLVNTRE*ARPQET
Trigger: GGTCTCCTGCGGCCGAGCTCACTCTCTTGTGTTGAC...AAGTAACATGCGACGGTGTCTGGTGTCACGTCTCGCCTGAGAAGCCCGTCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR TCA 90 bp CCTAAGCTGGGGCTCGGTCCGAGGCACACGCATGGCCTTGGCCAGACACAAACCAATTGTTTCCCATGCTaGAGACTCCTTCCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: PKLGLGPRHTHGLGQTQTNCFPC*RLLPCQ
Trigger: CTGACAGGGAAGGAGTCTTCAGCATGGGAAACAATT...GGTTTGTGTCTGGCCAAGGCCATGCGTGTGCCTCGGACCGAGCCCCAGCTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR TCA 90 bp TCTCTTCCTGAGGGGCTTCTTAACTTTTCCAAGCCAGGCAGTGAGCGTGGTGGGGTGCAGCAAAGTGGCTaGGTCCACATCGGATGCGGG +
Preference number: 4 (lower is better)
Translates to: SLPEGLLNFSKPGSERGGVQQSG*VHIGCG
Trigger: CCCGCATCCGATGTGGACTCAGCCACTTTGCTGCAC...CCCACCACGCTCACTGCCTGGCTTGGAAAAGTTAAGAAGCCCCTCAGGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR TCA 90 bp TCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCCGTCCATGTGCAGCAAAGTGGCTaGGTCCACATCGGATGCGGG +
Preference number: 4 (lower is better)
Translates to: SEGLHPQLHGTPYLFAVHVQQSG*VHIGCG
Trigger: CCCGCATCCGATGTGGACTCAGCCACTTTGCTGCAC...ATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp AACTTGGCCTCGATTCTCTTCCTGAGGGGCTTCTTAACTTTTCCAAGCCAGGCAGGGCCGAAGCCAGCCTaGCTCCCTCGCCTAAGCTGG +
Preference number: 4 (lower is better)
Translates to: NLASILFLRGFLTFPSQAGPKPA*LPRLSW
Trigger: CCAGCTTAGGCGAGGGAGTCAGGCTGGCTTCGGCCC...TGCCTGGCTTGGAAAAGTTAAGAAGCCCCTCAGGAAGAGAATCGAGGCCAAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR TCA 90 bp TGCCCTGATCCTCCTGGTAGGTACCCGCTAAGGGATTCAGGACAGAGCGTCACAATGAGCAGGGTGGCCTaGATGAAAACCGAGGGCCGA +
Preference number: 4 (lower is better)
Translates to: CPDPPGRYPLRDSGQSVTMSRVA*MKTEGR
Trigger: TCGGCCCTCGGTTTTCATTCAGGCCACCCTGCTCAT...TGTGACGCTCTGTCCTGAATCCCTTAGCGGGTACCTACCAGGAGGATCAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR TCA 90 bp TTGGCTGGAGAAGGCAGAGCTGGAGTCTCTCTGGCCCAGGCTAAGGGAGGGGAAGCTAAGGGAGGGGAATaGAGTAGTTCGCTCTCCACT +
Preference number: 4 (lower is better)
Translates to: LAGEGRAGVSLAQAKGGEAKGGE*SSSLST
Trigger: AGTGGAGAGCGAACTACTTCATTCCCCTCCCTTAGC...TTCCCCTCCCTTAGCCTGGGCCAGAGAGACTCCAGCTCTGCCTTCTCCAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR TCA 90 bp GGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGACGTGGGAAGGGTGCTaGGAGCCCGCTGTGGCGTGG +
Preference number: 4 (lower is better)
Translates to: GLSSRRSVCSVVLVWSPQTWEGC*EPAVAW
Trigger: CCACGCCACAGCGGGCTCTCAGCACCCTTCCCACGT...CTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR GCA 90 bp CATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCCGTCCATCCCCCGGAGGTATGGGCGCCGCCATCTTaGGTGACCCTTAACACCAGT +
Preference number: 4 (lower is better)
Translates to: HPQLHGTPYLFAVHPPEVWAPPS*VTLNTS
Trigger: ACTGGTGTTAAGGGTCACGCAAGATGGCGGCGCCCA...TACCTCCGGGGGATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR GCA 90 bp GTGTTTCTCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCACACTGCACAGCCCGTaGCACCGCATGCAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: VFLRGAPSAVAWNSLPVCTLHSP*HRMQPV
Trigger: GACAGGCTGCATGCGGTGGCACGGGCTGTGCAGTGT...GCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGAGAAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR GCA 90 bp CAGCAGCCTCACCCTGAAGACCTGGGCCTGCTGAATGGGCCACACGCTGCCTGTTTCCCATCCCCATCCTaGTCGTGTAAAGCTTGGTTT +
Preference number: 4 (lower is better)
Translates to: QQPHPEDLGLLNGPHAACFPSPS*SCKAWF
Trigger: AAACCAAGCTTTACACGAGCAGGATGGGGATGGGAA...ACAGGCAGCGTGTGGCCCATTCAGCAGGCCCAGGTCTTCAGGGTGAGGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp GGTAGGTACCCGCTAAGGGATTCAGGACAGAGCGTCACACTGCACGCAGGGTCCGCCAAAGAGAGTGGGTaGAATCATTTCAGGGACGGC +
Preference number: 4 (lower is better)
Translates to: GRYPLRDSGQSVTLHAGSAKESG*NHFRDG
Trigger: GCCGTCCCTGAAATGATTCCACCCACTCTCTTTGGC...GGACCCTGCGTGCAGTGTGACGCTCTGTCCTGAATCCCTTAGCGGGTACCTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp CGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGTCCTGCCTCCGTGGGTaGCACTTTTTACGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RRSVCSVVLVWSPQLFGVSCLRG*HFLRRQ
Trigger: CTGCCTGCGTAAAAAGTGCCACCCACGGAGGCAGGA...CACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp TTGGCTGGAGAAGGCAGAGCTGGAGTCTCTCTGGCCCAGGCTAAGGGAGGGGAAGCTGAGAATCTTTGTTaGGTCCCATCCCCCAGACTT +
Preference number: 4 (lower is better)
Translates to: LAGEGRAGVSLAQAKGGEAENLC*VPSPRL
Trigger: AAGTCTGGGGGATGGGACTCAACAAAGATTCTCAGC...TTCCCCTCCCTTAGCCTGGGCCAGAGAGACTCCAGCTCTGCCTTCTCCAGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR TCA 90 bp GTGTTTCTCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCGTCAACACAAGAGAGTaGGCTCGGCCGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: VFLRGAPSAVAWNSLPVCVNTRE*ARPQET
Trigger: GGTCTCCTGCGGCCGAGCTCACTCTCTTGTGTTGAC...GCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGAGAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp GAGAAGGCAGAGCTGGAGTCTCTCTGGCCCAGGCTAAGGGAGGGGAATGAAGTATGGTGGGCGAGCTGGTaGTATTGTAGTGACCCAGAC +
Preference number: 4 (lower is better)
Translates to: EKAELESLWPRLREGNEVWWASW*YCSDPD
Trigger: GTCTGGGTCACTACAATATCACCAGCTCGCCCACCA...TACTTCATTCCCCTCCCTTAGCCTGGGCCAGAGAGACTCCAGCTCTGCCTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR TCA 90 bp AGACAGAGCAGAAACCTCCCGAGCACTGTGTTCAAGCTAAGCTTTCCTAAGACGTTCCAAGCCAGGCAGTaGGCGTGGTGGGAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RQSRNLPSTVFKLSFPKTFQARQ*AWWEAG
Trigger: CCCAGCCTCCCACCACGCTCACTGCCTGGCTTGGAA...CGTCTTAGGAAAGCTTAGCTTGAACACAGTGCTCGGGAGGTTTCTGCTCTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR TCA 90 bp TTTTTGGCTGGAGAAGGCAGAGCTGGAGTCTCTCTGGCCCAGGCTAAGGGAGGGAGGTTTGCTCTAGGATaGCTCAGCTCTGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: FLAGEGRAGVSLAQAKGGRFALG*LSSVAM
Trigger: CATGGCCACAGAGCTGAGTCATCCTAGAGCAAACCT...CCCTCCCTTAGCCTGGGCCAGAGAGACTCCAGCTCTGCCTTCTCCAGCCAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR TCA 90 bp CGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGCCCTCAGACCTGACTTaGGAGAACAAAGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RRSVCSVVLVWSPQLFGVPSDLT*ENKASS
Trigger: GCTGCTGGCTTTGTTCTCTCAAGTCAGGTCTGAGGG...CACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR GCA 90 bp TCTCTTCCTGAGGGGCTTCTTAACTTTTCCAAGCCAGGCAGTGAGCGTGGTGGGTGGGCGCCGCCATCTTaGGTGACCCTTAACACCAGT +
Preference number: 4 (lower is better)
Translates to: SLPEGLLNFSKPGSERGGWAPPS*VTLNTS
Trigger: ACTGGTGTTAAGGGTCACGCAAGATGGCGGCGCCCA...CCCACCACGCTCACTGCCTGGCTTGGAAAAGTTAAGAAGCCCCTCAGGAAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR GCA 90 bp TCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCCGTCCATAGCTATCTCCTGGTCTaGTGGGTGGGAGGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: SEGLHPQLHGTPYLFAVHSYLLV*WVGGSL
Trigger: GAGAGACCCTCCCACCCAGCAGACCAGGAGATAGCT...ATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR CAA 72 bp AGGGGCATGTGTTTCTCAGAGGGGCTCCATCCGCAGTaGCATGGAACTCCTTACCTGTTTGCCGTCCATCCC +
Preference number: 4 (lower is better)
Translates to: RGMCFSEGLHPQ*HGTPYLFAVHP
Trigger: GGGATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGAGAAACACATGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp AACTTGGCCTCGATTCTCTTCCTGAGGGGCTTCTTAACTTTTCCAAGCCAGGCAGGCTGCCATCCAAGCTaGGTTCCGCAGGCCTCACCT +
Preference number: 4 (lower is better)
Translates to: NLASILFLRGFLTFPSQAGCHPS*VPQASP
Trigger: AGGTGAGGCCTGCGGAACTCAGCTTGGATGGCAGCC...TGCCTGGCTTGGAAAAGTTAAGAAGCCCCTCAGGAAGAGAATCGAGGCCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR TCA 90 bp TGGCTGGAGAAGGCAGAGCTGGAGTCTCTCTGGCCCAGGCTAAGGGAGGGGAATATCGTTATCCAAAGCTaGAGGCTGTTCTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: WLEKAELESLWPRLREGNIVIQS*RLFSHL
Trigger: CAGATGGGAGAACAGCCTTCAGCTTTGGATAACGAT...ATTCCCCTCCCTTAGCCTGGGCCAGAGAGACTCCAGCTCTGCCTTCTCCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR CCA 90 bp TCTCTTCCTGAGGGGCTTCTTAACTTTTCCAAGCCAGGCAGTGAGCGTGGTGGGGCACACGCATGGCCTTaGCCAGACACAAACCAAGAG +
Preference number: 4 (lower is better)
Translates to: SLPEGLLNFSKPGSERGGAHAWP*PDTNQE
Trigger: CTCTTGGTTTGTGTCTGGCCAAGGCCATGCGTGTGC...CCCACCACGCTCACTGCCTGGCTTGGAAAAGTTAAGAAGCCCCTCAGGAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp GGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCCTGGGCCTGCTGAATaGGCCACACGCTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: GLSSRRSVCSVVLVWSPQPGPAE*ATRCLC
Trigger: ACACAGGCAGCGTGTGGCCCATTCAGCAGGCCCAGG...CTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp TTTTTGGCTGGAGAAGGCAGAGCTGGAGTCTCTCTGGCCCAGGCTAAGGGAGGGAATTGTTTCCCATGCTaGAGACTCCTTCCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: FLAGEGRAGVSLAQAKGGNCFPC*RLLPCQ
Trigger: CTGACAGGGAAGGAGTCTTCAGCATGGGAAACAATT...CCCTCCCTTAGCCTGGGCCAGAGAGACTCCAGCTCTGCCTTCTCCAGCCAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR TCA 90 bp ACACCAGACACCGTCGCATGTTACTTGGAGAGAACAGAGACGTGCGGGCCACAGCCTGGATTTCTGGGTTaGACTCCGTCAAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: TPDTVACYLERTETCGPQPGFLG*TPSSQR
Trigger: TCTTTGGCTTGACGGAGTTCAACCCAGAAATCCAGG...CTGTGGCCCGCACGTCTCTGTTCTCTCCAAGTAACATGCGACGGTGTCTGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR GCA 90 bp TGTGTTTCTCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCTGTGGCGTGGGTCATaGCTTCTGCACCCCACTTTC +
Preference number: 4 (lower is better)
Translates to: CVSQRGSIRSCMELLTCLLWRGS*LLHPTF
Trigger: GAAAGTGGGGTGCAGAAGGCATGACCCACGCCACAG...CAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGAGAAACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp ACACCAGACACCGTCGCATGTTACTTGGAGAGAACAGAGACGTGCGGGCCACAGGGAAACCTGGATTTCTaGGTTGAACTCCGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: TPDTVACYLERTETCGPQGNLDF*VELRQA
Trigger: GGCTTGACGGAGTTCAACCCAGAAATCCAGGTTTCC...CTGTGGCCCGCACGTCTCTGTTCTCTCCAAGTAACATGCGACGGTGTCTGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp CTAAGACGGGCTTCTCAGGCGAGACGTGACACCAGACACCGTCGCATGTTACTTCATCGTCACCCTCCATaGGAAATACTGGTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LRRASQARRDTRHRRMLLHRHPP*EILVLQ
Trigger: CTGGAGGACCAGTATTTCCCATGGAGGGTGACGATG...AAGTAACATGCGACGGTGTCTGGTGTCACGTCTCGCCTGAGAAGCCCGTCTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp GTATATAGGCAATACGATTATTACAGAAGCCGATGGGTTCCCTCAGACCTGACTCTTGGCGCTGGCGGATaGGGCAGGTGCCCTCCATGG +
Preference number: 4 (lower is better)
Translates to: VYRQYDYYRSRWVPSDLTLGAGG*GRCPPW
Trigger: CCATGGAGGGCACCTGCCCCATCCGCCAGCGCCAAG...AGTCAGGTCTGAGGGAACCCATCGGCTTCTGTAATAATCGTATTGCCTATATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
3UTR CAA 72 bp GGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTaGGTTTGGTCTCCACAGCTCTTCGGGGTGGGGTGT +
Preference number: 4 (lower is better)
Translates to: GLSSRRSVCSVV*VWSPQLFGVGC
Trigger: ACACCCCACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp CTAAGACGGGCTTCTCAGGCGAGACGTGACACCAGACACCGTCGCATGTTACTTACCAAGAGACTGCCATaGCAGACAGAGCAGAAACCT +
Preference number: 4 (lower is better)
Translates to: LRRASQARRDTRHRRMLLTKRLP*QTEQKP
Trigger: AGGTTTCTGCTCTGTCTGTCATGGCAGTCTCTTGGT...AAGTAACATGCGACGGTGTCTGGTGTCACGTCTCGCCTGAGAAGCCCGTCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR TCA 90 bp GTGTTTCTCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCGGGTTCCCTCAGACCTaGCTTGAGAGAACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: VFLRGAPSAVAWNSLPVCGFPQT*LERTKP
Trigger: TGGCTTTGTTCTCTCAAGTCAGGTCTGAGGGAACCC...GCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGAGAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR GCA 90 bp TCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCCGTCCATACCCTCGGATGTTCTTaGCCCATACAAACAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SEGLHPQLHGTPYLFAVHTLGCS*PIQTAL
Trigger: GAGAGCTGTTTGTATGGGGCAAGAACATCCGAGGGT...ATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR GCA 90 bp GTATATAGGCAATACGATTATTACAGAAGCCGATGGGTTCCCTCAGACCTGACTCGCCCTGGCTGGCTCTaGAGGGGTGGTCCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: VYRQYDYYRSRWVPSDLTRPGWL*RGGPCS
Trigger: TGAACAGGGACCACCCCTGCAGAGCCAGCCAGGGCG...AGTCAGGTCTGAGGGAACCCATCGGCTTCTGTAATAATCGTATTGCCTATATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp TCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCCGTCCATACAGCTCTCCTTTGTTaGTCAGTGCAGCAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: SEGLHPQLHGTPYLFAVHTALLC*SVQQSG
Trigger: GCCACTTTGCTGCACTGACCAACAAAGGAGAGCTGT...ATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp AGGCAAGTCACGCTACTAAATCAAACATTGTTCACAATTTCTGGATCTTCCTCCGCCAAGGAGTGCCAGTaGTTCCCGGGACGGGGCCGC +
Preference number: 4 (lower is better)
Translates to: RQVTLLNQTLFTISGSSSAKECQ*FPGRGR
Trigger: GCGGCCCCGTCCCGGGAACCACTGGCACTCCTTGGC...GGAGGAAGATCCAGAAATTGTGAACAATGTTTGATTTAGTAGCGTGACTTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp AGACAGAGCAGAAACCTCCCGAGCACTGTGTTCAAGCTAAGCTTTCCTAAGACGTCCGAGGCACACGCATaGCCTTGGCCAGACACAAAC +
Preference number: 4 (lower is better)
Translates to: RQSRNLPSTVFKLSFPKTSEAHA*PWPDTN
Trigger: GTTTGTGTCTGGCCAAGGCCATGCGTGTGCCTCGGA...CGTCTTAGGAAAGCTTAGCTTGAACACAGTGCTCGGGAGGTTTCTGCTCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp TCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCCGTCCATCCATCCGCAGTTGCATaGAACTCCTTACCTGTTTGC +
Preference number: 4 (lower is better)
Translates to: SEGLHPQLHGTPYLFAVHPSAVA*NSLPVC
Trigger: GCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGG...ATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp GTGTTTCTCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCAGCGTAGTCTTGGTTTaGTCTCCACAGCTCTTCGGG +
Preference number: 4 (lower is better)
Translates to: VFLRGAPSAVAWNSLPVCSVVLV*SPQLFG
Trigger: CCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCT...GCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGAGAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp AGAGACTGCCATGACAGACAGAGCAGAAACCTCCCGAGCACTGTGTTCAAGCTAGCCGCAAGCAGCAGATaGAATCTTTTGGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: RDCHDRQSRNLPSTVFKLAASSR*NLLVQL
Trigger: GAGCTGGACCAAAAGATTTCATCTGCTGCTTGCGGC...TAGCTTGAACACAGTGCTCGGGAGGTTTCTGCTCTGTCTGTCATGGCAGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR GCA 90 bp TCTCTTCCTGAGGGGCTTCTTAACTTTTCCAAGCCAGGCAGTGAGCGTGGTGGGCACAAACCAAGAGACTaGCATGACAGACAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: SLPEGLLNFSKPGSERGGHKPRD*HDRQSR
Trigger: TCTGCTCTGTCTGTCATGGCAGTCTCTTGGTTTGTG...CCCACCACGCTCACTGCCTGGCTTGGAAAAGTTAAGAAGCCCCTCAGGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR GCA 90 bp TGTGTTTCTCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGGGCTCCATCCGCAGTTaGATGGAACTCCTTACCTGT +
Preference number: 4 (lower is better)
Translates to: CVSQRGSIRSCMELLTCLGSIRS*MELLTC
Trigger: ACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCC...CAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGAGAAACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp AGGCAAGTCACGCTACTAAATCAAACATTGTTCACAATTTCTGGATCTTCCTCCAGCGAGCTTGCGGTGTaGCAGGCGGCCAGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: RQVTLLNQTLFTISGSSSSELAV*QAARKG
Trigger: GCCCTTCCTGGCCGCCTGCCACACCGCAAGCTCGCT...GGAGGAAGATCCAGAAATTGTGAACAATGTTTGATTTAGTAGCGTGACTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp CGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGCTCTTCGGGGTGTGCTCGTGTAAAGCTTaGTTTATCTTCTCGGCGTTC +
Preference number: 4 (lower is better)
Translates to: RRSVCSVVLVWSPQLFGVCSCKA*FIFSAF
Trigger: GAACGCCGAGAAGATAAACCAAGCTTTACACGAGCA...CACCCCGAAGAGCTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp GTGTTTCTCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCACTGGCCTCGTGTCATaGAGAAAAGCATGTGTGTCG +
Preference number: 4 (lower is better)
Translates to: VFLRGAPSAVAWNSLPVCTGLVS*RKACVS
Trigger: CGACACACATGCTTTTCTCCATGACACGAGGCCAGT...GCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGAGAAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp AGAGACTGCCATGACAGACAGAGCAGAAACCTCCCGAGCACTGTGTTCAAGCTAGCTGAGAATCTTTGTTaGGTCCCATCCCCCAGACTT +
Preference number: 4 (lower is better)
Translates to: RDCHDRQSRNLPSTVFKLAENLC*VPSPRL
Trigger: AAGTCTGGGGGATGGGACTCAACAAAGATTCTCAGC...TAGCTTGAACACAGTGCTCGGGAGGTTTCTGCTCTGTCTGTCATGGCAGTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR GCA 90 bp CAGTGGTGCCAGATATTTCATCGTTATCCAAAGCTGAAGGCTGTTCTCCCATCTGTGACAGAGGCCAGCTaGAGGTACTCCGAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: QWCQIFHRYPKLKAVLPSVTEAS*RYSEFP
Trigger: GGGAAACTCGGAGTACCTGCAGCTGGCCTCTGTCAC...AGATGGGAGAACAGCCTTCAGCTTTGGATAACGATGAAATATCTGGCACCACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR CCA 90 bp GGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGGTCAGTGCAGCAAAGTaGCTGAGTCCACATCGGATG +
Preference number: 4 (lower is better)
Translates to: GLSSRRSVCSVVLVWSPQVSAAK*LSPHRM
Trigger: CATCCGATGTGGACTCAGCCACTTTGCTGCACTGAC...CTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp GAAAGGCAAGTCACGCTACTAAATCAAACATTGTTCACAATTTCTGGATCTTCCAGCGTGGTGGGAGGCTaGGGCTGGTGCCTGCGGACA +
Preference number: 4 (lower is better)
Translates to: ERQVTLLNQTLFTISGSSSVVGG*GWCLRT
Trigger: TGTCCGCAGGCACCAGCCCCAGCCTCCCACCACGCT...GGAAGATCCAGAAATTGTGAACAATGTTTGATTTAGTAGCGTGACTTGCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp CCTTTAGTTTTCCCATCCCCATCCTGCTCGTGTAAAGCTTGGTTTATCTTCTCGGCTGCTCCTGGGGACTaGCCTCGTGTCATGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PLVFPSPSCSCKAWFIFSAAPGD*PRVMEK
Trigger: TTTCTCCATGACACGAGGCCAGTCCCCAGGAGCAGC...CGAGAAGATAAACCAAGCTTTACACGAGCAGGATGGGGATGGGAAAACTAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp ATTCATCAGTGGTGCCAGATATTTCATCGTTATCCAAAGCTGAAGGCTGTTCTCAGGCAGGGAGACGGGTaGGGGCTCCAACACATACTC +
Preference number: 4 (lower is better)
Translates to: IHQWCQIFHRYPKLKAVLRQGDG*GLQHIL
Trigger: GAGTATGTGTTGGAGCCCTCACCCGTCTCCCTGCCT...GAGAACAGCCTTCAGCTTTGGATAACGATGAAATATCTGGCACCACTGATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR TCA 90 bp ATTCATCAGTGGTGCCAGATATTTCATCGTTATCCAAAGCTGAAGGCTGTTCTCCGCCGCCATCTTGCGTaGCCCTTAACACCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: IHQWCQIFHRYPKLKAVLRRHLA*PLTPVL
Trigger: GAGGACTGGTGTTAAGGGTCACGCAAGATGGCGGCG...GAGAACAGCCTTCAGCTTTGGATAACGATGAAATATCTGGCACCACTGATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR CCA 90 bp AACTTGGCCTCGATTCTCTTCCTGAGGGGCTTCTTAACTTTTCCAAGCCAGGCAACAGCTCTCCTTTGTTaGTCAGTGCAGCAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: NLASILFLRGFLTFPSQATALLC*SVQQSG
Trigger: GCCACTTTGCTGCACTGACCAACAAAGGAGAGCTGT...TGCCTGGCTTGGAAAAGTTAAGAAGCCCCTCAGGAAGAGAATCGAGGCCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp ATTCATCAGTGGTGCCAGATATTTCATCGTTATCCAAAGCTGAAGGCTGTTCTCTGGAGAAGGCAGAGCTaGAGTCTCTCTGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: IHQWCQIFHRYPKLKAVLWRRQS*SLSGPG
Trigger: GCCTGGGCCAGAGAGACTCCAGCTCTGCCTTCTCCA...GAGAACAGCCTTCAGCTTTGGATAACGATGAAATATCTGGCACCACTGATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618035.4
3UTR CAA 72 bp TTATTACAGAAGCCGATGGGTTCCCTCAGACCTGACTaGAGAGAACAAAGCCAGCAGCTCAAAGAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: LLQKPMGSLRPD*REQSQQLKEPV
Trigger: CACAGGCTCTTTGAGCTGCTGGCTTTGTTCTCTCAAGTCAGGTCTGAGGGAACCCATCGGCTTCTGTAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp CCTTTAGTTTTCCCATCCCCATCCTGCTCGTGTAAAGCTTGGTTTATCTTCTCGGCCGCAAGCAGCAGATaGAATCTTTTGGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: PLVFPSPSCSCKAWFIFSAASSR*NLLVQL
Trigger: GAGCTGGACCAAAAGATTTCATCTGCTGCTTGCGGC...CGAGAAGATAAACCAAGCTTTACACGAGCAGGATGGGGATGGGAAAACTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR GCA 90 bp ATTCATCAGTGGTGCCAGATATTTCATCGTTATCCAAAGCTGAAGGCTGTTCTCTGGGCGCCGCCATCTTaGGTGACCCTTAACACCAGT +
Preference number: 4 (lower is better)
Translates to: IHQWCQIFHRYPKLKAVLWAPPS*VTLNTS
Trigger: ACTGGTGTTAAGGGTCACGCAAGATGGCGGCGCCCA...GAGAACAGCCTTCAGCTTTGGATAACGATGAAATATCTGGCACCACTGATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR GCA 90 bp GAAAGGCAAGTCACGCTACTAAATCAAACATTGTTCACAATTTCTGGATCTTCCACACTGCACAGCCCGTaGCACCGCATGCAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: ERQVTLLNQTLFTISGSSTLHSP*HRMQPV
Trigger: GACAGGCTGCATGCGGTGGCACGGGCTGTGCAGTGT...GGAAGATCCAGAAATTGTGAACAATGTTTGATTTAGTAGCGTGACTTGCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CCA 90 bp GTATATAGGCAATACGATTATTACAGAAGCCGATGGGTTCCCTCAGACCTGACTGCCAAAGAGAGTGGGTaGAATCATTTCAGGGACGGC +
Preference number: 4 (lower is better)
Translates to: VYRQYDYYRSRWVPSDLTAKESG*NHFRDG
Trigger: GCCGTCCCTGAAATGATTCCACCCACTCTCTTTGGC...AGTCAGGTCTGAGGGAACCCATCGGCTTCTGTAATAATCGTATTGCCTATATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp CCTTTAGTTTTCCCATCCCCATCCTGCTCGTGTAAAGCTTGGTTTATCTTCTCGGGAAACCTGGATTTCTaGGTTGAACTCCGTCAAGCC +
Preference number: 4 (lower is better)
Translates to: PLVFPSPSCSCKAWFIFSGNLDF*VELRQA
Trigger: GGCTTGACGGAGTTCAACCCAGAAATCCAGGTTTCC...CGAGAAGATAAACCAAGCTTTACACGAGCAGGATGGGGATGGGAAAACTAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR GCA 90 bp GTATATAGGCAATACGATTATTACAGAAGCCGATGGGTTCCCTCAGACCTGACTTCCTTTGTTGGTCAGTaGAGCAAAGTGGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: VYRQYDYYRSRWVPSDLTSFVGQ*SKVAES
Trigger: GGACTCAGCCACTTTGCTGCACTGACCAACAAAGGA...AGTCAGGTCTGAGGGAACCCATCGGCTTCTGTAATAATCGTATTGCCTATATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp ATTCATCAGTGGTGCCAGATATTTCATCGTTATCCAAAGCTGAAGGCTGTTCTCGGCCACTTTTACTCCTaGTTGAAGGCAAAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: IHQWCQIFHRYPKLKAVLGHFYS*LKAKAL
Trigger: CAGCGCCTTTGCCTTCAACCAGGAGTAAAAGTGGCC...GAGAACAGCCTTCAGCTTTGGATAACGATGAAATATCTGGCACCACTGATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR CCA 90 bp CCTTTAGTTTTCCCATCCCCATCCTGCTCGTGTAAAGCTTGGTTTATCTTCTCGTATTACAGAAGCCGATaGGTTCCCTCAGACCTGACT +
Preference number: 4 (lower is better)
Translates to: PLVFPSPSCSCKAWFIFSYYRSR*VPSDLT
Trigger: AGTCAGGTCTGAGGGAACCCATCGGCTTCTGTAATA...CGAGAAGATAAACCAAGCTTTACACGAGCAGGATGGGGATGGGAAAACTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp TTAATTCAAGTATATAGGCAATACGATTATTACAGAAGCCGATGGGTTCCCTCAAGCTCAAAGAGCCTGTaGCATGGGACGTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LIQVYRQYDYYRSRWVPSSSKSL*HGTWEG
Trigger: CCCTTCCCACGTCCCATGTCACAGGCTCTTTGAGCT...TGAGGGAACCCATCGGCTTCTGTAATAATCGTATTGCCTATATACTTGAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR GCA 90 bp ATTCATCAGTGGTGCCAGATATTTCATCGTTATCCAAAGCTGAAGGCTGTTCTCTCCACTCCAGAGGTTTaGTCTAGGATGACTCAGCTC +
Preference number: 4 (lower is better)
Translates to: IHQWCQIFHRYPKLKAVLSTPEV*SRMTQL
Trigger: GAGCTGAGTCATCCTAGAGCAAACCTCTGGAGTGGA...GAGAACAGCCTTCAGCTTTGGATAACGATGAAATATCTGGCACCACTGATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR CCA 90 bp TTAATTCAAGTATATAGGCAATACGATTATTACAGAAGCCGATGGGTTCCCTCATATCTCCTGGTCTGCTaGGTGGGAGGGTCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LIQVYRQYDYYRSRWVPSYLLVC*VGGSLQ
Trigger: CTGGAGAGACCCTCCCACCCAGCAGACCAGGAGATA...TGAGGGAACCCATCGGCTTCTGTAATAATCGTATTGCCTATATACTTGAATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CCA 90 bp TTAATTCAAGTATATAGGCAATACGATTATTACAGAAGCCGATGGGTTCCCTCACTGGGCGCCCTTATTTaGGGGGATGTTGATCCCGAG +
Preference number: 4 (lower is better)
Translates to: LIQVYRQYDYYRSRWVPSLGALI*GDVDPE
Trigger: CTCGGGATCAACATCCCCCCAAATAAGGGCGCCCAG...TGAGGGAACCCATCGGCTTCTGTAATAATCGTATTGCCTATATACTTGAATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR TCA 90 bp AGGCAAGTCACGCTACTAAATCAAACATTGTTCACAATTTCTGGATCTTCCTCCGGAGGTTTAGATGAATaGCTTGGCCAGGGTCACCAT +
Preference number: 4 (lower is better)
Translates to: RQVTLLNQTLFTISGSSSGGLDE*LGQGHH
Trigger: ATGGTGACCCTGGCCAAGTCATTCATCTAAACCTCC...GGAGGAAGATCCAGAAATTGTGAACAATGTTTGATTTAGTAGCGTGACTTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR GCA 90 bp AGGCAAGTCACGCTACTAAATCAAACATTGTTCACAATTTCTGGATCTTCCTCCACCCTCGGATGTTCTTaGCCCATACAAACAGCTCTC +
Preference number: 4 (lower is better)
Translates to: RQVTLLNQTLFTISGSSSTLGCS*PIQTAL
Trigger: GAGAGCTGTTTGTATGGGGCAAGAACATCCGAGGGT...GGAGGAAGATCCAGAAATTGTGAACAATGTTTGATTTAGTAGCGTGACTTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR TCA 90 bp TTAATTCAAGTATATAGGCAATACGATTATTACAGAAGCCGATGGGTTCCCTCAAATTGTTTCCCATGCTaGAGACTCCTTCCCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LIQVYRQYDYYRSRWVPSNCFPC*RLLPCQ
Trigger: CTGACAGGGAAGGAGTCTTCAGCATGGGAAACAATT...TGAGGGAACCCATCGGCTTCTGTAATAATCGTATTGCCTATATACTTGAATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS TCA 90 bp AGCTGGGCACCACAAAGGAAGGCACGCCCAGCGCCCCCGAGAAGCTaGAGCCCCACACGAAGACGCGATCGGCGCGGGCAGCGCGCTCGC +
Preference number: 5 (lower is better)
Translates to: SWAPQRKARPAPPRS*SPTRRRDRRGQRAR
Trigger: GCGAGCGCGCTGCCCGCGCCGATCGCGTCTTCGTGTGGGGCTTCAGCTTCTCGGGGGCGCTGGGCGTGCCTTCCTTTGTGGTGCCCAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000616051.1
ENST00000618035.4
CDS CCA 90 bp GTCTGCTCCCACGCCGCCCCAGGCCGTCCTCCAGCGACAGCGAGCTaGAGTGGACGATTCCCTGCTGCCTTCGCATCCCCTGCCCAGGTC +
Preference number: 5 (lower is better)
Translates to: VCSHAAPGRPPATAS*SGRFPAAFASPAQV
Trigger: GACCTGGGCAGGGGATGCGAAGGCAGCAGGGAATCGTCCACTCCAGCTCGCTGTCGCTGGAGGACGGCCTGGGGCGGCGTGGGAGCAGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615250.1
CDS GCA 90 bp CAGCAGATGAAATCTGGCCTTGCTGCAGCCGTCTCCGCTCCGGTCTaGTCCCACGCCGCCCCAGGCCGTCCTCCAGCGACAGCGAGCTGG +
Preference number: 5 (lower is better)
Translates to: QQMKSGLAAAVSAPV*SHAAPGRPPATASW
Trigger: CCAGCTCGCTGTCGCTGGAGGACGGCCTGGGGCGGCGTGGGAGCAGACCGGAGCGGAGACGGCTGCAGCAAGGCCAGATTTCATCTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615250.1
CDS GCA 90 bp CCCAGGCCGTCCTCCAGCGACAGCGAGCTGGAGTGGACGATTCCCTaGTGCCTTCGCATCCCCTGCCCAGGTCCCCTCAAACCTATCGAC +
Preference number: 5 (lower is better)
Translates to: PRPSSSDSELEWTIP*CLRIPCPGPLKPID
Trigger: GTCGATAGGTTTGAGGGGACCTGGGCAGGGGATGCGAAGGCAGCAGGGAATCGTCCACTCCAGCTCGCTGTCGCTGGAGGACGGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615250.1
CDS-3UTR CAA 90 bp GCGCTGGCCTCTGCCAAGGAGTGCCAGTGGTTCCCGGGACGGGGCCGCCCAAGCCACCCTCGGATGTTCTaGCCCCATACAAACAGCTCT +
Preference number: 5 (lower is better)
Translates to: ALASAKECQWFPGRGRPSHPRMF*PHTNSS
Trigger: AGAGCTGTTTGTATGGGGCAAGAACATCCGAGGGTG...GCTTGGGCGGCCCCGTCCCGGGAACCACTGGCACTCCTTGGCAGAGGCCAGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS GCA 90 bp AGGCCGTCCTCCAGCGACAGCGAGCTGGAGTGGACGATTCCCTGCTaGCTTCGCATCCCCTGCCCAGGTCCCCTCAAACCTATCGACAGG +
Preference number: 5 (lower is better)
Translates to: RPSSSDSELEWTIPC*LRIPCPGPLKPIDR
Trigger: CCTGTCGATAGGTTTGAGGGGACCTGGGCAGGGGATGCGAAGGCAGCAGGGAATCGTCCACTCCAGCTCGCTGTCGCTGGAGGACGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615250.1
CDS TCA 90 bp TCCCGGGACGGGGCCGCCCAAGCAGGTGAGGGAGGTTTAGATGAATaGCTTGGCCAGGGTCACCATGTGGTCCACGCCACATGCCACGTC +
Preference number: 5 (lower is better)
Translates to: SRDGAAQAGEGGLDE*LGQGHHVVHATCHV
Trigger: GACGTGGCATGTGGCGTGGACCACATGGTGACCCTGGCCAAGTCATTCATCTAAACCTCCCTCACCTGCTTGGGCGGCCCCGTCCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610322.5
ENST00000618102.4
CDS GCA 90 bp GACAGCGAGCTGGAGTGGACGATTCCCTGCTGCCTTCGCATCCCCTaGCCAGGTCCCCTCAAACCTATCGACAGGCTCACTGCAACCTCC +
Preference number: 5 (lower is better)
Translates to: DSELEWTIPCCLRIP*PGPLKPIDRLTATS
Trigger: GGAGGTTGCAGTGAGCCTGTCGATAGGTTTGAGGGGACCTGGGCAGGGGATGCGAAGGCAGCAGGGAATCGTCCACTCCAGCTCGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615250.1
CDS-3UTR CAA 90 bp CAGCCTCACCCTGAAGACCTGGGCCTGCTGAATGGGCCACACGCTGCCTGTGTCGGGCTCCATCCGCAGTaGCATGGAACTCCTTACCTG +
Preference number: 5 (lower is better)
Translates to: QPHPEDLGLLNGPHAACVGLHPQ*HGTPYL
Trigger: CAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCC...GACACAGGCAGCGTGTGGCCCATTCAGCAGGCCCAGGTCTTCAGGGTGAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS GCA 90 bp GAGAGCTGCCCGCAGTTTGGGGTTGAACTGGAGACAGAGAACCTCTaGTGGGCTCACACCAGGGCCACCGGGCTTGGTAACTTACTGGTC +
Preference number: 5 (lower is better)
Translates to: ESCPQFGVELETENL*WAHTRATGLGNLLV
Trigger: GACCAGTAAGTTACCAAGCCCGGTGGCCCTGGTGTGAGCCCAGCAGAGGTTCTCTGTCTCCAGTTCAACCCCAAACTGCGGGCAGCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616051.1
CDS-3UTR CAA 90 bp GGCCGTCTGCCCTTGTCCCCCAGCTATCTCCTGGTCTGCTGGGTGGGAGGGTCTAACAGCTCTCCTTTGTaGGTCAGTGCAGCAAAGTGG +
Preference number: 5 (lower is better)
Translates to: GRLPLSPSYLLVCWVGGSNSSPL*VSAAKW
Trigger: CCACTTTGCTGCACTGACCAACAAAGGAGAGCTGTT...AGACCCTCCCACCCAGCAGACCAGGAGATAGCTGGGGGACAAGGGCAGACGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS GCA 90 bp CTCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTaGCGTCCATCCCCCGGAGGTAATCAGAGGAGTGGGCCTGTTGTC +
Preference number: 5 (lower is better)
Translates to: LRGAPSAVAWNSLPV*RPSPGGNQRSGPVV
Trigger: GACAACAGGCCCACTCCTCTGATTACCTCCGGGGGATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CAA 90 bp TTGGCTGGAGAAGGCAGAGCTGGAGTCTCTCTGGCCCAGGCTAAGGGAGGGGAAACCGTAGGTGGCAACTaGGATAACGTTCACTCCCGC +
Preference number: 5 (lower is better)
Translates to: LAGEGRAGVSLAQAKGGETVGGN*DNVHSR
Trigger: GCGGGAGTGAACGTTATCCAAGTTGCCACCTACGGT...TTCCCCTCCCTTAGCCTGGGCCAGAGAGACTCCAGCTCTGCCTTCTCCAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR CAA 90 bp GGCGGATATGCTCGGGGCCCTCGGCGCAGAGGAACTTGGCCTCGATTCTCTTCCACCTGGATTTCTGGGTaGAACTCCGTCAAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: GGYARGPRRRGTWPRFSSTWISG*NSVKPK
Trigger: CTTTGGCTTGACGGAGTTCAACCCAGAAATCCAGGT...GGAAGAGAATCGAGGCCAAGTTCCTCTGCGCCGAGGGCCCCGAGCATATCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CAA 90 bp GAGGGACCTTGCCCTGATCCTCCTGGTAGGTACCCGCTAAGGGATTCAGGACAGGGCACACGCATGGCCTaGGCCAGACACAAACCAAGA +
Preference number: 5 (lower is better)
Translates to: EGPCPDPPGRYPLRDSGQGTRMA*ARHKPR
Trigger: TCTTGGTTTGTGTCTGGCCAAGGCCATGCGTGTGCC...CTGTCCTGAATCCCTTAGCGGGTACCTACCAGGAGGATCAGGGCAAGGTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CAA 90 bp CTAAGACGGGCTTCTCAGGCGAGACGTGACACCAGACACCGTCGCATGTTACTTGTGACCCAGACCTGTTaGCCCATCAGCACCCCATCC +
Preference number: 5 (lower is better)
Translates to: LRRASQARRDTRHRRMLLVTQTC*PISTPS
Trigger: GGATGGGGTGCTGATGGGCAAACAGGTCTGGGTCAC...AAGTAACATGCGACGGTGTCTGGTGTCACGTCTCGCCTGAGAAGCCCGTCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CAA 90 bp TCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCCGTCCATGTGACCCAGACCTGTTaGCCCATCAGCACCCCATCC +
Preference number: 5 (lower is better)
Translates to: SEGLHPQLHGTPYLFAVHVTQTC*PISTPS
Trigger: GGATGGGGTGCTGATGGGCAAACAGGTCTGGGTCAC...ATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CAA 90 bp TGGCCCAGGCTAAGGGAGGGGAATGAAGTAGTTCGCTCTCCACTCCAGAGGTTTAGGTCTCCACCCAGCTaGGTGGGCGAGCTGGTGATA +
Preference number: 5 (lower is better)
Translates to: WPRLREGNEVVRSPLQRFRSPPS*VGELVI
Trigger: TATCACCAGCTCGCCCACCAAGCTGGGTGGAGACCT...AAACCTCTGGAGTGGAGAGCGAACTACTTCATTCCCCTCCCTTAGCCTGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR CAA 90 bp TGGCTGGAGAAGGCAGAGCTGGAGTCTCTCTGGCCCAGGCTAAGGGAGGGGAATCACTTTTACTCCTGGTaGAAGGCAAAGGCGCTGACG +
Preference number: 5 (lower is better)
Translates to: WLEKAELESLWPRLREGNHFYSW*KAKALT
Trigger: CGTCAGCGCCTTTGCCTTCAACCAGGAGTAAAAGTG...ATTCCCCTCCCTTAGCCTGGGCCAGAGAGACTCCAGCTCTGCCTTCTCCAGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR CAA 90 bp TGTGTTTCTCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGAGTGGGCCTGTTGTCTaGGCGCTGGCGGATGGGGCA +
Preference number: 5 (lower is better)
Translates to: CVSQRGSIRSCMELLTCLSGPVV*ALADGA
Trigger: TGCCCCATCCGCCAGCGCCAAGACAACAGGCCCACT...CAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGAGAAACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS GCA 90 bp TCAGTACAAAGGCGCCGTTCTGTTGGATGGGTGGAACCTGAGAGCTaGCCGCAGTTTGGGGTTGAACTGGAGACAGAGAACCTCTGCTGG +
Preference number: 5 (lower is better)
Translates to: SVQRRRSVGWVEPES*PQFGVELETENLCW
Trigger: CCAGCAGAGGTTCTCTGTCTCCAGTTCAACCCCAAACTGCGGGCAGCTCTCAGGTTCCACCCATCCAACAGAACGGCGCCTTTGTACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616051.1
CDS CCA 90 bp ACCAGGGCCACCGGGCTTGGTAACTTACTGGTCAGTGCAGCAAAGTaGCTGAGTCCACATCGGATGCGGGAAACCTGGATTTCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: TRATGLGNLLVSAAK*LSPHRMRETWISGL
Trigger: CAACCCAGAAATCCAGGTTTCCCGCATCCGATGTGGACTCAGCCACTTTGCTGCACTGACCAGTAAGTTACCAAGCCCGGTGGCCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616051.1
CDS-3UTR CAA 90 bp GGCCGTCTGCCCTTGTCCCCCAGCTATCTCCTGGTCTGCTGGGTGGGAGGGTCTCACCTTTCTTCCACATaGCCCATAAGAATTGTTTCC +
Preference number: 5 (lower is better)
Translates to: GRLPLSPSYLLVCWVGGSHLSST*PIRIVS
Trigger: GGAAACAATTCTTATGGGCAATGTGGAAGAAAGGTG...AGACCCTCCCACCCAGCAGACCAGGAGATAGCTGGGGGACAAGGGCAGACGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CAA 90 bp ACACCAGACACCGTCGCATGTTACTTGGAGAGAACAGAGACGTGCGGGCCACAGACCGTAGGTGGCAACTaGGATAACGTTCACTCCCGC +
Preference number: 5 (lower is better)
Translates to: TPDTVACYLERTETCGPQTVGGN*DNVHSR
Trigger: GCGGGAGTGAACGTTATCCAAGTTGCCACCTACGGT...CTGTGGCCCGCACGTCTCTGTTCTCTCCAAGTAACATGCGACGGTGTCTGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CAA 90 bp GCGAGACGTGACACCAGACACCGTCGCATGTTACTTGGAGAGAACAGAGACGTGTCGGCGCAGAGGAACTaGGCCTCGATTCTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: ARRDTRHRRMLLGENRDVSAQRN*ASILFL
Trigger: CAGGAAGAGAATCGAGGCCAAGTTCCTCTGCGCCGA...CACGTCTCTGTTCTCTCCAAGTAACATGCGACGGTGTCTGGTGTCACGTCTCGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CAA 90 bp TGTGTTTCTCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGAGAGGAGTGGGCCTGTaGTCTTGGCGCTGGCGGATG +
Preference number: 5 (lower is better)
Translates to: CVSQRGSIRSCMELLTCLRGVGL*SWRWRM
Trigger: CATCCGCCAGCGCCAAGACAACAGGCCCACTCCTCT...CAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGAGAAACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CAA 90 bp GGTTTATCTTCTCGGCGTTCTGTGTGTAGCGTAGTCTTGGTTTGGTCTCCACAGAGGGGCCGTCTGCCCTaGTCCCCCAGCTATCTCCTG +
Preference number: 5 (lower is better)
Translates to: GLSSRRSVCSVVLVWSPQRGRLP*SPSYLL
Trigger: CAGGAGATAGCTGGGGGACAAGGGCAGACGGCCCCT...CTGTGGAGACCAAACCAAGACTACGCTACACACAGAACGCCGAGAAGATAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS TCA 90 bp GAAGGCAGAGCTGGAGTCTCTCTGGCCCAGGCTAAGGGAGGGGAATaGAGTAGTTCGCTCTCCACTCCAGAGGTTTGCTCTAGGATGACT +
Preference number: 5 (lower is better)
Translates to: EGRAGVSLAQAKGGE*SSSLSTPEVCSRMT
Trigger: AGTCATCCTAGAGCAAACCTCTGGAGTGGAGAGCGAACTACTTCATTCCCCTCCCTTAGCCTGGGCCAGAGAGACTCCAGCTCTGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR CAA 90 bp CATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCCGTCCATCCCCCGGAGGTACACCCTCGGATGTTCTaGCCCCATACAAACAGCTCT +
Preference number: 5 (lower is better)
Translates to: HPQLHGTPYLFAVHPPEVHPRMF*PHTNSS
Trigger: AGAGCTGTTTGTATGGGGCAAGAACATCCGAGGGTG...TACCTCCGGGGGATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CAA 90 bp CATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCCGTCCATCCCCCGGAGGTACACTTTTACTCCTGGTaGAAGGCAAAGGCGCTGACG +
Preference number: 5 (lower is better)
Translates to: HPQLHGTPYLFAVHPPEVHFYSW*KAKALT
Trigger: CGTCAGCGCCTTTGCCTTCAACCAGGAGTAAAAGTG...TACCTCCGGGGGATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CAA 90 bp GTGTTTCTCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCACCGTAGGTGGCAACTaGGATAACGTTCACTCCCGC +
Preference number: 5 (lower is better)
Translates to: VFLRGAPSAVAWNSLPVCTVGGN*DNVHSR
Trigger: GCGGGAGTGAACGTTATCCAAGTTGCCACCTACGGT...GCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGAGAAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS TCA 90 bp AGTCTTAGAGGACAGCAGTGTGAATCCATAGCCGCAAGCAGCAGATaGAATCTTTTGGTCCAGCTCCAGGCGATAGGGCACGGGCTGGAT +
Preference number: 5 (lower is better)
Translates to: SLRGQQCESIAASSR*NLLVQLQAIGHGLD
Trigger: ATCCAGCCCGTGCCCTATCGCCTGGAGCTGGACCAAAAGATTTCATCTGCTGCTTGCGGCTATGGATTCACACTGCTGTCCTCTAAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000616051.1
ENST00000618035.4
CDS-3UTR CAA 90 bp TCAGAGGGGCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTGCCGTCCATACCTGGATTTCTGGGTaGAACTCCGTCAAGCCAAAG +
Preference number: 5 (lower is better)
Translates to: SEGLHPQLHGTPYLFAVHTWISG*NSVKPK
Trigger: CTTTGGCTTGACGGAGTTCAACCCAGAAATCCAGGT...ATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGCCCCTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CAA 90 bp GAGAAGGCAGAGCTGGAGTCTCTCTGGCCCAGGCTAAGGGAGGGGAATGAAGTATCTGCCTTTGATTTTTaGGCTGGAGAAGGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: EKAELESLWPRLREGNEVSAFDF*AGEGRA
Trigger: AGCTCTGCCTTCTCCAGCCAAAAAATCAAAGGCAGA...TACTTCATTCCCCTCCCTTAGCCTGGGCCAGAGAGACTCCAGCTCTGCCTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR CAA 90 bp GTATATAGGCAATACGATTATTACAGAAGCCGATGGGTTCCCTCAGACCTGACTAGGTCTCCACCCAGCTaGGTGGGCGAGCTGGTGATA +
Preference number: 5 (lower is better)
Translates to: VYRQYDYYRSRWVPSDLTRSPPS*VGELVI
Trigger: TATCACCAGCTCGCCCACCAAGCTGGGTGGAGACCT...AGTCAGGTCTGAGGGAACCCATCGGCTTCTGTAATAATCGTATTGCCTATATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CAA 90 bp CTAAGACGGGCTTCTCAGGCGAGACGTGACACCAGACACCGTCGCATGTTACTTCACCTTTCTTCCACATaGCCCATAAGAATTGTTTCC +
Preference number: 5 (lower is better)
Translates to: LRRASQARRDTRHRRMLLHLSST*PIRIVS
Trigger: GGAAACAATTCTTATGGGCAATGTGGAAGAAAGGTG...AAGTAACATGCGACGGTGTCTGGTGTCACGTCTCGCCTGAGAAGCCCGTCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CAA 90 bp AAGGCAGAGCTGGAGTCTCTCTGGCCCAGGCTAAGGGAGGGGAATGAAGTAGTTCACCTTTCTTCCACATaGCCCATAAGAATTGTTTCC +
Preference number: 5 (lower is better)
Translates to: KAELESLWPRLREGNEVVHLSST*PIRIVS
Trigger: GGAAACAATTCTTATGGGCAATGTGGAAGAAAGGTG...AACTACTTCATTCCCCTCCCTTAGCCTGGGCCAGAGAGACTCCAGCTCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS-3UTR CAA 90 bp CCTTTAGTTTTCCCATCCCCATCCTGCTCGTGTAAAGCTTGGTTTATCTTCTCGCTTAGAAATCTCAGGTaGTGCTCCTGGGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PLVFPSPSCSCKAWFIFSLRNLR*CSWGCS
Trigger: GGAGCAGCCCCAGGAGCACAACCTGAGATTTCTAAG...CGAGAAGATAAACCAAGCTTTACACGAGCAGGATGGGGATGGGAAAACTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CAA 90 bp GAAAGGCAAGTCACGCTACTAAATCAAACATTGTTCACAATTTCTGGATCTTCCAGGTCTCCACCCAGCTaGGTGGGCGAGCTGGTGATA +
Preference number: 5 (lower is better)
Translates to: ERQVTLLNQTLFTISGSSRSPPS*VGELVI
Trigger: TATCACCAGCTCGCCCACCAAGCTGGGTGGAGACCT...GGAAGATCCAGAAATTGTGAACAATGTTTGATTTAGTAGCGTGACTTGCCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS-3UTR CAA 90 bp TTAATTCAAGTATATAGGCAATACGATTATTACAGAAGCCGATGGGTTCCCTCAGAACTCCTTACCTGTTaGCCGTCCATCCCCCGGAGG +
Preference number: 5 (lower is better)
Translates to: LIQVYRQYDYYRSRWVPSELLTC*PSIPRR
Trigger: CCTCCGGGGGATGGACGGCAAACAGGTAAGGAGTTC...TGAGGGAACCCATCGGCTTCTGTAATAATCGTATTGCCTATATACTTGAATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS-3UTR CAA 90 bp AGGCAAGTCACGCTACTAAATCAAACATTGTTCACAATTTCTGGATCTTCCTCCAACAGCTCTCCTTTGTaGGTCAGTGCAGCAAAGTGG +
Preference number: 5 (lower is better)
Translates to: RQVTLLNQTLFTISGSSSNSSPL*VSAAKW
Trigger: CCACTTTGCTGCACTGACCAACAAAGGAGAGCTGTT...GGAGGAAGATCCAGAAATTGTGAACAATGTTTGATTTAGTAGCGTGACTTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610322.5
CDS TCA 72 bp CCACAAAGGAAGGCACGCCCAGCGCCCCCGAGAAGCTaGAGCCCCACACGAAGACGCGATCGGCGCGGGCAG +
Preference number: 6 (lower is better)
Translates to: PQRKARPAPPRS*SPTRRRDRRGQ
Trigger: CTGCCCGCGCCGATCGCGTCTTCGTGTGGGGCTTCAGCTTCTCGGGGGCGCTGGGCGTGCCTTCCTTTGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000616051.1
ENST00000618035.4
CDS GCA 72 bp AAATCTGGCCTTGCTGCAGCCGTCTCCGCTCCGGTCTaGTCCCACGCCGCCCCAGGCCGTCCTCCAGCGACA +
Preference number: 6 (lower is better)
Translates to: KSGLAAAVSAPV*SHAAPGRPPAT
Trigger: TGTCGCTGGAGGACGGCCTGGGGCGGCGTGGGAGCAGACCGGAGCGGAGACGGCTGCAGCAAGGCCAGATTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615250.1
CDS CCA 72 bp CGCCCCAGGCCGTCCTCCAGCGACAGCGAGCTGGAGTaGACGATTCCCTGCTGCCTTCGCATCCCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: RPRPSSSDSELE*TIPCCLRIPCP
Trigger: TGGGCAGGGGATGCGAAGGCAGCAGGGAATCGTCCACTCCAGCTCGCTGTCGCTGGAGGACGGCCTGGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615250.1
CDS TCA 72 bp CGCGCCTCAGCAGCCTCTGGGCGCCGCCATCTTGCGTaGCCCTTAACACCAGTCCTCGCCGGAAGAGGCTAC +
Preference number: 6 (lower is better)
Translates to: RASAASGRRHLA*PLTPVLAGRGY
Trigger: GTAGCCTCTTCCGGCGAGGACTGGTGTTAAGGGTCACGCAAGATGGCGGCGCCCAGAGGCTGCTGAGGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614461.4
ENST00000618035.4
CDS CCA 72 bp CCAGCGCCATCCTCCGTTCCGCGCCTCAGCAGCCTCTaGGCGCCGCCATCTTGCGTGACCCTTAACACCAGT +
Preference number: 6 (lower is better)
Translates to: PAPSSVPRLSSL*APPSCVTLNTS
Trigger: ACTGGTGTTAAGGGTCACGCAAGATGGCGGCGCCCAGAGGCTGCTGAGGCGCGGAACGGAGGATGGCGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000618035.4
CDS CCA 72 bp CTGGCGGATGGGGCAGGTGCCCTCCATGGGAAATACTaGTCCTCCAGGCGACCGATTCCCAGGCACCCTCGG +
Preference number: 6 (lower is better)
Translates to: LADGAGALHGKY*SSRRPIPRHPR
Trigger: CCGAGGGTGCCTGGGAATCGGTCGCCTGGAGGACCAGTATTTCCCATGGAGGGCACCTGCCCCATCCGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS CAA 72 bp GTCCATCCCCCGGAGGTAATCAGAGGAGTGGGCCTGTaGTCTTGGCGCTGGCGGATGGGGCAGGTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: VHPPEVIRGVGL*SWRWRMGQVPS
Trigger: GGAGGGCACCTGCCCCATCCGCCAGCGCCAAGACAACAGGCCCACTCCTCTGATTACCTCCGGGGGATGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS CCA 72 bp GGCTCCCCAGGCATCGTCACCCTCCATGGGAAATACTaGTCCTCCAGGCGACCGATTCCCAGGCACCCTCGG +
Preference number: 6 (lower is better)
Translates to: GSPGIVTLHGKY*SSRRPIPRHPR
Trigger: CCGAGGGTGCCTGGGAATCGGTCGCCTGGAGGACCAGTATTTCCCATGGAGGGTGACGATGCCTGGGGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610322.5
ENST00000618102.4
CDS GCA 72 bp TCCAGCGACAGCGAGCTGGAGTGGACGATTCCCTGCTaGCTTCGCATCCCCTGCCCAGGTCCCCTCAAACCT +
Preference number: 6 (lower is better)
Translates to: SSDSELEWTIPC*LRIPCPGPLKP
Trigger: AGGTTTGAGGGGACCTGGGCAGGGGATGCGAAGGCAGCAGGGAATCGTCCACTCCAGCTCGCTGTCGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615250.1
CDS GCA 72 bp TCCTCCAGCGACAGCGAGCTGGAGTGGACGATTCCCTaGTGCCTTCGCATCCCCTGCCCAGGTCCCCTCAAA +
Preference number: 6 (lower is better)
Translates to: SSSDSELEWTIP*CLRIPCPGPLK
Trigger: TTTGAGGGGACCTGGGCAGGGGATGCGAAGGCAGCAGGGAATCGTCCACTCCAGCTCGCTGTCGCTGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615250.1
CDS CAA 90 bp TCCGTCGGCGGACACGGCCAGGCAGCAATCACCGTAGGTGGCAACTaGGATAACGTTCACTCCCGCCAGGTCTCCACCCAGCTTGGTGGG +
Preference number: 6 (lower is better)
Translates to: SVGGHGQAAITVGGN*DNVHSRQVSTQLGG
Trigger: CCCACCAAGCTGGGTGGAGACCTGGCGGGAGTGAACGTTATCCAAGTTGCCACCTACGGTGATTGCTGCCTGGCCGTGTCCGCCGACGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000616051.1
ENST00000618035.4
ENST00000618102.4
CDS CAA 90 bp ACACCAGTCCTCGCCGGAAGAGGCTACGGCCACTTTTACTCCTGGTaGAAGGCAAAGGCGCTGACGGCAGCCCAAGGCTCAGGGAGGCGT +
Preference number: 6 (lower is better)
Translates to: TPVLAGRGYGHFYSW*KAKALTAAQGSGRR
Trigger: ACGCCTCCCTGAGCCTTGGGCTGCCGTCAGCGCCTTTGCCTTCAACCAGGAGTAAAAGTGGCCGTAGCCTCTTCCGGCGAGGACTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614461.4
ENST00000618035.4
CDS CAA 90 bp CTGTTTGCCGTCCATCCCCCGGAGGTAATCAGAGGAGTGGGCCTGTaGTCTTGGCGCTGGCGGATGGGGCAGGTGCCCTCCATGGGAAAT +
Preference number: 6 (lower is better)
Translates to: LFAVHPPEVIRGVGL*SWRWRMGQVPSMGN
Trigger: ATTTCCCATGGAGGGCACCTGCCCCATCCGCCAGCGCCAAGACAACAGGCCCACTCCTCTGATTACCTCCGGGGGATGGACGGCAAACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS CCA 72 bp GTCCTCGCCGGAAGAGGCTACGGCCACTTTTACTCCTaGTTGAAGGCAAAGGCGCTGACGGCAGCCCAAGGC +
Preference number: 6 (lower is better)
Translates to: VLAGRGYGHFYS*LKAKALTAAQG
Trigger: GCCTTGGGCTGCCGTCAGCGCCTTTGCCTTCAACCAGGAGTAAAAGTGGCCGTAGCCTCTTCCGGCGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614461.4
ENST00000618035.4
CDS TCA 72 bp GGGGCCGCCCAAGCAGGTGAGGGAGGTTTAGATGAATaGCTTGGCCAGGGTCACCATGTGGTCCACGCCACA +
Preference number: 6 (lower is better)
Translates to: GAAQAGEGGLDE*LGQGHHVVHAT
Trigger: TGTGGCGTGGACCACATGGTGACCCTGGCCAAGTCATTCATCTAAACCTCCCTCACCTGCTTGGGCGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000610322.5
ENST00000618102.4
CDS GCA 72 bp CCGCAGTTTGGGGTTGAACTGGAGACAGAGAACCTCTaGTGGGCTCACACCAGGGCCACCGGGCTTGGTAAC +
Preference number: 6 (lower is better)
Translates to: PQFGVELETENL*WAHTRATGLGN
Trigger: GTTACCAAGCCCGGTGGCCCTGGTGTGAGCCCAGCAGAGGTTCTCTGTCTCCAGTTCAACCCCAAACTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616051.1
CDS GCA 72 bp CTGGAGTGGACGATTCCCTGCTGCCTTCGCATCCCCTaGCCAGGTCCCCTCAAACCTATCGACAGGCTCACT +
Preference number: 6 (lower is better)
Translates to: LEWTIPCCLRIP*PGPLKPIDRLT
Trigger: AGTGAGCCTGTCGATAGGTTTGAGGGGACCTGGGCAGGGGATGCGAAGGCAGCAGGGAATCGTCCACTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615250.1
CDS CAA 72 bp GGACACGGCCAGGCAGCAATCACCGTAGGTGGCAACTaGGATAACGTTCACTCCCGCCAGGTCTCCACCCAG +
Preference number: 6 (lower is better)
Translates to: GHGQAAITVGGN*DNVHSRQVSTQ
Trigger: CTGGGTGGAGACCTGGCGGGAGTGAACGTTATCCAAGTTGCCACCTACGGTGATTGCTGCCTGGCCGTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000616051.1
ENST00000618035.4
ENST00000618102.4
CDS CAA 72 bp CTCGCCGGAAGAGGCTACGGCCACTTTTACTCCTGGTaGAAGGCAAAGGCGCTGACGGCAGCCCAAGGCTCA +
Preference number: 6 (lower is better)
Translates to: LAGRGYGHFYSW*KAKALTAAQGS
Trigger: TGAGCCTTGGGCTGCCGTCAGCGCCTTTGCCTTCAACCAGGAGTAAAAGTGGCCGTAGCCTCTTCCGGCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614461.4
ENST00000618035.4
CDS CAA 90 bp GGCGCCGTTCTGTTGGATGGGTGGAACCTGAGAGCTGCCCGCAGTTaGGGGTTGAACTGGAGACAGAGAACCTCTGCTGGGCTCACACCA +
Preference number: 6 (lower is better)
Translates to: GAVLLDGWNLRAARS*GLNWRQRTSAGLTP
Trigger: TGGTGTGAGCCCAGCAGAGGTTCTCTGTCTCCAGTTCAACCCCAAACTGCGGGCAGCTCTCAGGTTCCACCCATCCAACAGAACGGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616051.1
CDS TCA 72 bp CTGAAGACTCCTTCCCTGTCAGTCAACACAAGAGAGTaGGCTCGGCCGCAGGAGACCTGCAGCACCCGTGTC +
Preference number: 6 (lower is better)
Translates to: LKTPSLSVNTRE*ARPQETCSTRV
Trigger: GACACGGGTGCTGCAGGTCTCCTGCGGCCGAGCTCACTCTCTTGTGTTGACTGACAGGGAAGGAGTCTTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000615250.1
ENST00000616051.1
ENST00000618035.4
CDS TCA 72 bp CCGCCAGGTCTCCACCCAGCTTGGTGGGCGAGCTGGTaGTATTGTAGTGACCCAGACCTGTTTGCCCATCAG +
Preference number: 6 (lower is better)
Translates to: PPGLHPAWWASW*YCSDPDLFAHQ
Trigger: CTGATGGGCAAACAGGTCTGGGTCACTACAATATCACCAGCTCGCCCACCAAGCTGGGTGGAGACCTGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000616051.1
ENST00000618035.4
ENST00000618102.4
CDS GCA 72 bp TCTGTGGCCATGTATCGTTTAACACTGCACAGCCCGTaGCACCGCATGCAGCCTGTCGCACCTTCCCCACTC +
Preference number: 6 (lower is better)
Translates to: SVAMYRLTLHSP*HRMQPVAPSPL
Trigger: GAGTGGGGAAGGTGCGACAGGCTGCATGCGGTGGCACGGGCTGTGCAGTGTTAAACGATACATGGCCACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS CCA 72 bp TGGAACCTGAGAGCTGCCCGCAGTTTGGGGTTGAACTaGAGACAGAGAACCTCTGCTGGGCTCACACCAGGG +
Preference number: 6 (lower is better)
Translates to: WNLRAARSLGLN*RQRTSAGLTPG
Trigger: CCCTGGTGTGAGCCCAGCAGAGGTTCTCTGTCTCCAGTTCAACCCCAAACTGCGGGCAGCTCTCAGGTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616051.1
CDS CCA 72 bp GAGGTAATCAGAGGAGTGGGCCTGTTGTCTTGGCGCTaGCGGATGGGGCAGGTGCCCTCCATGGGAAATACT +
Preference number: 6 (lower is better)
Translates to: EVIRGVGLLSWR*RMGQVPSMGNT
Trigger: AGTATTTCCCATGGAGGGCACCTGCCCCATCCGCCAGCGCCAAGACAACAGGCCCACTCCTCTGATTACCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS CAA 90 bp GTTCTGTTGGATGGGTGGAACCTGAGAGCTGCCCGCAGTTTGGGGTaGAACTGGAGACAGAGAACCTCTGCTGGGCTCACACCAGGGCCA +
Preference number: 6 (lower is better)
Translates to: VLLDGWNLRAARSLG*NWRQRTSAGLTPGP
Trigger: TGGCCCTGGTGTGAGCCCAGCAGAGGTTCTCTGTCTCCAGTTCAACCCCAAACTGCGGGCAGCTCTCAGGTTCCACCCATCCAACAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616051.1
CDS TCA 72 bp TGTCTCCTGAGGTCTGTCCAGAGGCAGGGAGACGGGTaGGGGCTCCAACACATACTCGTAGCCCCTCGTTTT +
Preference number: 6 (lower is better)
Translates to: CLLRSVQRQGDG*GLQHILVAPRF
Trigger: AAAACGAGGGGCTACGAGTATGTGTTGGAGCCCTCACCCGTCTCCCTGCCTCTGGACAGACCTCAGGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000615250.1
ENST00000616051.1
ENST00000618035.4
CDS GCA 72 bp AAACATGTCCTTCTCCGTTTAACACTGCACAGCCCGTaGCACCGCATGCAGCCTGTCGCACCTTCCCCACTC +
Preference number: 6 (lower is better)
Translates to: KHVLLRLTLHSP*HRMQPVAPSPL
Trigger: GAGTGGGGAAGGTGCGACAGGCTGCATGCGGTGGCACGGGCTGTGCAGTGTTAAACGGAGAAGGACATGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000616051.1
ENST00000618102.4
CDS GCA 72 bp AGGCGCCGTTCTGTTGGATGGGTGGAACCTGAGAGCTaGCCGCAGTTTGGGGTTGAACTGGAGACAGAGAAC +
Preference number: 6 (lower is better)
Translates to: RRRSVGWVEPES*PQFGVELETEN
Trigger: GTTCTCTGTCTCCAGTTCAACCCCAAACTGCGGGCAGCTCTCAGGTTCCACCCATCCAACAGAACGGCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616051.1
CDS GCA 72 bp GCTCCATCCGCAGTTGCATGGAACTCCTTACCTGTTTaGCGTCCATCCCCCGGAGGTAATCAGAGGAGTGGG +
Preference number: 6 (lower is better)
Translates to: APSAVAWNSLPV*RPSPGGNQRSG
Trigger: CCCACTCCTCTGATTACCTCCGGGGGATGGACGGCAAACAGGTAAGGAGTTCCATGCAACTGCGGATGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000614461.4
CDS CAA 72 bp GATGGGTGGAACCTGAGAGCTGCCCGCAGTTTGGGGTaGAACTGGAGACAGAGAACCTCTGCTGGGCTCACA +
Preference number: 6 (lower is better)
Translates to: DGWNLRAARSLG*NWRQRTSAGLT
Trigger: TGTGAGCCCAGCAGAGGTTCTCTGTCTCCAGTTCAACCCCAAACTGCGGGCAGCTCTCAGGTTCCACCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616051.1
CDS CAA 72 bp CTGTTGGATGGGTGGAACCTGAGAGCTGCCCGCAGTTaGGGGTTGAACTGGAGACAGAGAACCTCTGCTGGG +
Preference number: 6 (lower is better)
Translates to: LLDGWNLRAARS*GLNWRQRTSAG
Trigger: CCCAGCAGAGGTTCTCTGTCTCCAGTTCAACCCCAAACTGCGGGCAGCTCTCAGGTTCCACCCATCCAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616051.1
CDS GCA 72 bp CCAGGCGACCGATTCCCAGGCACCCTCGGATGTTCTTaGCCCATACAAACAGCTCTCCTTTGTTGGTCAGTG +
Preference number: 6 (lower is better)
Translates to: PGDRFPGTLGCS*PIQTALLCWSV
Trigger: CACTGACCAACAAAGGAGAGCTGTTTGTATGGGGCAAGAACATCCGAGGGTGCCTGGGAATCGGTCGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000618102.4
CDS CCA 72 bp GCTGAGTCCACATCGGATGCGGGAAACCTGGATTTCTaGGTTGAACTCCGTCAAGCCAAAGAGAGTGGGTGG +
Preference number: 6 (lower is better)
Translates to: AESTSDAGNLDF*VELRQAKESGW
Trigger: CCACCCACTCTCTTTGGCTTGACGGAGTTCAACCCAGAAATCCAGGTTTCCCGCATCCGATGTGGACTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000616051.1
ENST00000618102.4
CDS CAA 72 bp TCCAGGCGACCGATTCCCAGGCACCCTCGGATGTTCTaGCCCCATACAAACAGCTCTCCTTTGTTGGTCAGT +
Preference number: 6 (lower is better)
Translates to: SRRPIPRHPRMF*PHTNSSPLLVS
Trigger: ACTGACCAACAAAGGAGAGCTGTTTGTATGGGGCAAGAACATCCGAGGGTGCCTGGGAATCGGTCGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000618102.4
CDS CCA 72 bp AGTTATCAGTACAAAGGCGCCGTTCTGTTGGATGGGTaGAACCTGAGAGCTGCCCGCAGTTTGGGGTTGAAC +
Preference number: 6 (lower is better)
Translates to: SYQYKGAVLLDG*NLRAARSLGLN
Trigger: GTTCAACCCCAAACTGCGGGCAGCTCTCAGGTTCCACCCATCCAACAGAACGGCGCCTTTGTACTGATAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616051.1
CDS TCA 72 bp GTCCACATCGGATGCGGGAAACCTGGATTTCTGGGTTaGACTCCGTCAAGCCAAAGAGAGTGGGTGGAATCA +
Preference number: 6 (lower is better)
Translates to: VHIGCGKPGFLG*TPSSQREWVES
Trigger: TGATTCCACCCACTCTCTTTGGCTTGACGGAGTTCAACCCAGAAATCCAGGTTTCCCGCATCCGATGTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000616051.1
ENST00000618102.4
CDS TCA 72 bp ACAGCTCTCCTTTGTTGGTCAGTGCAGCAAAGTGGCTaGGTCCACATCGGATGCGGGAAACCTGGATTTCTG +
Preference number: 6 (lower is better)
Translates to: TALLCWSVQQSG*VHIGCGKPGFL
Trigger: CAGAAATCCAGGTTTCCCGCATCCGATGTGGACTCAGCCACTTTGCTGCACTGACCAACAAAGGAGAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000618102.4
CDS TCA 72 bp GGCTTGGTAACTTACTGGTCAGTGCAGCAAAGTGGCTaGGTCCACATCGGATGCGGGAAACCTGGATTTCTG +
Preference number: 6 (lower is better)
Translates to: GLVTYWSVQQSG*VHIGCGKPGFL
Trigger: CAGAAATCCAGGTTTCCCGCATCCGATGTGGACTCAGCCACTTTGCTGCACTGACCAGTAAGTTACCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616051.1
CDS CCA 72 bp GCAAAGTGGCTGAGTCCACATCGGATGCGGGAAACCTaGATTTCTGGGTTGAACTCCGTCAAGCCAAAGAGA +
Preference number: 6 (lower is better)
Translates to: AKWLSPHRMRET*ISGLNSVKPKR
Trigger: TCTCTTTGGCTTGACGGAGTTCAACCCAGAAATCCAGGTTTCCCGCATCCGATGTGGACTCAGCCACTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000616051.1
ENST00000618102.4
CDS CAA 72 bp AGTCCACATCGGATGCGGGAAACCTGGATTTCTGGGTaGAACTCCGTCAAGCCAAAGAGAGTGGGTGGAATC +
Preference number: 6 (lower is better)
Translates to: SPHRMRETWISG*NSVKPKRVGGI
Trigger: GATTCCACCCACTCTCTTTGGCTTGACGGAGTTCAACCCAGAAATCCAGGTTTCCCGCATCCGATGTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000616051.1
ENST00000618102.4
CDS CAA 90 bp AAGTGGCTGAGTCCACATCGGATGCGGGAAACCTGGATTTCTGGGTaGAACTCCGTCAAGCCAAAGAGAGTGGGTGGAATCATTTCAGGG +
Preference number: 6 (lower is better)
Translates to: KWLSPHRMRETWISG*NSVKPKRVGGIISG
Trigger: CCCTGAAATGATTCCACCCACTCTCTTTGGCTTGACGGAGTTCAACCCAGAAATCCAGGTTTCCCGCATCCGATGTGGACTCAGCCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000616051.1
ENST00000618102.4
CDS TCA 72 bp GTAGTTCGCTCTCCACTCCAGAGGTTTGCTCTAGGATaGCTCAGCTCTGTGGCCATGTATCGTTTAACACTG +
Preference number: 6 (lower is better)
Translates to: VVRSPLQRFALG*LSSVAMYRLTL
Trigger: CAGTGTTAAACGATACATGGCCACAGAGCTGAGTCATCCTAGAGCAAACCTCTGGAGTGGAGAGCGAACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618035.4
CDS CAA 72 bp AACCTCGAGGCAAACAACTTCTGGCTTAGCCCTTGCTaGAGTTATCAGTACAAAGGCGCCGTTCTGTTGGAT +
Preference number: 6 (lower is better)
Translates to: NLEANNFWLSPC*SYQYKGAVLLD
Trigger: ATCCAACAGAACGGCGCCTTTGTACTGATAACTCAAGCAAGGGCTAAGCCAGAAGTTGTTTGCCTCGAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616051.1
CDS CAA 90 bp AGAGAGTGGGTGGAATCATTTCAGGGACGGCACTTTCCACTAGGTTaGGACCTTTCCCAAGAATTCCATAGCCCCAGACAAAAACATGTC +
Preference number: 6 (lower is better)
Translates to: REWVESFQGRHFPLG*DLSQEFHSPRQKHV
Trigger: GACATGTTTTTGTCTGGGGCTATGGAATTCTTGGGAAAGGTCCAAACCTAGTGGAAAGTGCCGTCCCTGAAATGATTCCACCCACTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000616051.1
ENST00000618102.4
CDS CAA 90 bp ACATTATACAACCTCGAGGCAAACAACTTCTGGCTTAGCCCTTGCTaGAGTTATCAGTACAAAGGCGCCGTTCTGTTGGATGGGTGGAAC +
Preference number: 6 (lower is better)
Translates to: TLYNLEANNFWLSPC*SYQYKGAVLLDGWN
Trigger: GTTCCACCCATCCAACAGAACGGCGCCTTTGTACTGATAACTCAAGCAAGGGCTAAGCCAGAAGTTGTTTGCCTCGAGGTTGTATAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616051.1
CDS CAA 90 bp GTGACTTTCACTGTAAATTTCATTTTCGACCACCTTTCTTCCACATaGCCCATAAGAATTGTTTCCCATGCTGAAGACTCCTTCCCTGTC +
Preference number: 6 (lower is better)
Translates to: VTFTVNFIFDHLSST*PIRIVSHAEDSFPV
Trigger: GACAGGGAAGGAGTCTTCAGCATGGGAAACAATTCTTATGGGCAATGTGGAAGAAAGGTGGTCGAAAATGAAATTTACAGTGAAAGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000610322.5
ENST00000614461.4
ENST00000615250.1
ENST00000616051.1
ENST00000618035.4