RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RCC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000180198

Ensembl transcript IDs: ENST00000373831.7, ENST00000373832.5, ENST00000373833.10, ENST00000398958.6, ENST00000411533.5, ENST00000419074.5, ENST00000427469.5, ENST00000429051.1, ENST00000430407.1, ENST00000434290.6, ENST00000478232.1, ENST00000486790.2, ENST00000649185.1, ENST00000683442.1

Found 400 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTaGAGCCGAATGGATGGGTACGATGTACACAAGCAACACCTGAGG +
Preference number: 1 (lower is better)
Translates to: AQSGVSLRFQAVGCR*SRMDGYDVHKQHLR
Trigger: CCTCAGGTGTTGCTTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR CCA 90 bp CTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATaGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCT +
Preference number: 1 (lower is better)
Translates to: LFAIPGRWLQVKPNG*VRCTQATPEGQEYA
Trigger: AGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR TCA 90 bp TTCTGCACGTTCCTCTGGGCGTGGGTCCGTGACAGATGGCTCTTATaGCTGTACCATTTGTTTGCCTGTGGACTGTTAGGGACAGGAAAG +
Preference number: 1 (lower is better)
Translates to: FCTFLWAWVRDRWLL*LYHLFACGLLGTGK
Trigger: CTTTCCTGTCCCTAACAGTCCACAGGCAAACAAATGGTACAGTCATAAGAGCCATCTGTCACGGACCCACGCCCAGAGGAACGTGCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR TCA 90 bp TTTGTTACAGTCACACTGACAGCTGGTTGGCACCTCAGGACATCTTaGCATCACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTAT +
Preference number: 1 (lower is better)
Translates to: FVTVTLTAGWHLRTS*HHLSCSLNTRFIVY
Trigger: ATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTGATGTCAAGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR-3UTR GCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCACAGGAACTGACACAGTaGTCAGGGCTGGGGAGAGGC +
Preference number: 2 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAQELTQ*SGLGRG
Trigger: GCCTCTCCCCAGCCCTGAGCACTGTGTCAGTTCCTG...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR GCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGAGGCCCGCTGCCATCTaGAGCTGTCACTGCTTCCCT +
Preference number: 2 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMRPAAI*SCHCFP
Trigger: AGGGAAGCAGTGACAGCTGCAGATGGCAGCGGGCCT...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCATTCTGCACGTTCCTCTaGGCGTGGGTCCGTGACAGA +
Preference number: 2 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAFCTFL*AWVRDR
Trigger: TCTGTCACGGACCCACGCCCAGAGGAACGTGCAGAA...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR TCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGAGCCATGTTCCTTTTaGAAACCCCCTGTCCATCCC +
Preference number: 2 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAEPCSF*KPPVHP
Trigger: GGGATGGACAGGGGGTTTTCAAAAGGAACATGGCTC...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR GCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCCCCCATACCCTGCTCTaGTCTGCCCAGAGTGGTGTC +
Preference number: 2 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLPHTLL*SAQSGV
Trigger: GACACCACTCTGGGCAGAGCAGAGCAGGGTATGGGG...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGCCAACCAGGACCATaGAAGGTAGGGAAAAGGGGA +
Preference number: 2 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMGQPGP*KVGKRG
Trigger: TCCCCTTTTCCCTACCTTCCATGGTCCTGGTTGGCC...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAAACGTTCCTCTGGGCGTaGGTCCGTGACAGATGGCTC +
Preference number: 2 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQTFLWA*VRDRWL
Trigger: GAGCCATCTGTCACGGACCCACGCCCAGAGGAACGT...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR TCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCCTGGGCGTGGGTCCGTaGCAGATGGCTCTTATGACT +
Preference number: 2 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLLGVGP*QMALMT
Trigger: AGTCATAAGAGCCATCTGTCACGGACCCACGCCCAG...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR TCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCGCCGTTGGCTGCAGGTaGAGCCGAATGGATGGGTAC +
Preference number: 2 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSAVGCR*SRMDGY
Trigger: GTACCCATCCATTCGGCTTCACCTGCAGCCAACGGC...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR GCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCCAGGAACTGACACAGTaGTCAGGGCTGGGGAGAGGC +
Preference number: 2 (lower is better)
Translates to: GWVRCTQATPEGQEYALCQELTQ*SGLGRG
Trigger: GCCTCTCCCCAGCCCTGAGCACTGTGTCAGTTCCTG...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCACGTTCCTCTGGGCGTaGGTCCGTGACAGATGGCTC +
Preference number: 2 (lower is better)
Translates to: GWVRCTQATPEGQEYALCTFLWA*VRDRWL
Trigger: GAGCCATCTGTCACGGACCCACGCCCAGAGGAACGT...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAATTCTGCACGTTCCTCTaGGCGTGGGTCCGTGACAGA +
Preference number: 2 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQFCTFL*AWVRDR
Trigger: TCTGTCACGGACCCACGCCCAGAGGAACGTGCAGAA...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR TCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTGGGCGTGGGTCCGTaGCAGATGGCTCTTATGACT +
Preference number: 2 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSLGVGP*QMALMT
Trigger: AGTCATAAGAGCCATCTGTCACGGACCCACGCCCAG...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR GCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGAGGCCCGCTGCCATCTaGAGCTGTCACTGCTTCCCT +
Preference number: 2 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLRPAAI*SCHCFP
Trigger: AGGGAAGCAGTGACAGCTGCAGATGGCAGCGGGCCT...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGACGTTCCTCTGGGCGTaGGTCCGTGACAGATGGCTC +
Preference number: 2 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLTFLWA*VRDRWL
Trigger: GAGCCATCTGTCACGGACCCACGCCCAGAGGAACGT...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR TCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGCTGGGCGTGGGTCCGTaGCAGATGGCTCTTATGACT +
Preference number: 2 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLLGVGP*QMALMT
Trigger: AGTCATAAGAGCCATCTGTCACGGACCCACGCCCAG...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR TCA 90 bp TTTGAAGCCTTTGTTACAGTCACACTGACAGCTGGTTGGCACCTCAGGACATCTGCCGTTGGCTGCAGGTaGAGCCGAATGGATGGGTAC +
Preference number: 2 (lower is better)
Translates to: FEAFVTVTLTAGWHLRTSAVGCR*SRMDGY
Trigger: GTACCCATCCATTCGGCTTCACCTGCAGCCAACGGC...AGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAAAGGCTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR-3UTR GCA 90 bp TTTGAAGCCTTTGTTACAGTCACACTGACAGCTGGTTGGCACCTCAGGACATCTCAGGAACTGACACAGTaGTCAGGGCTGGGGAGAGGC +
Preference number: 2 (lower is better)
Translates to: FEAFVTVTLTAGWHLRTSQELTQ*SGLGRG
Trigger: GCCTCTCCCCAGCCCTGAGCACTGTGTCAGTTCCTG...AGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAAAGGCTTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR-3UTR GCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCTACCCTGCTCTGCTCTaGCCAGAGTGGTGTCTCTTT +
Preference number: 2 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLYPALL*PEWCLF
Trigger: AAAGAGACACCACTCTGGGCAGAGCAGAGCAGGGTA...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCGGCCAACCAGGACCATaGAAGGTAGGGAAAAGGGGA +
Preference number: 2 (lower is better)
Translates to: GWVRCTQATPEGQEYALCGQPGP*KVGKRG
Trigger: TCCCCTTTTCCCTACCTTCCATGGTCCTGGTTGGCC...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCCAACTTCTCAGAGAGTaGGCACAAAACCCCAGGGGG +
Preference number: 2 (lower is better)
Translates to: GWVRCTQATPEGQEYALCQLLRE*AQNPRG
Trigger: CCCCCTGGGGTTTTGTGCCCACTCTCTGAGAAGTTG...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR TCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCGAGCCATGTTCCTTTTaGAAACCCCCTGTCCATCCC +
Preference number: 2 (lower is better)
Translates to: GWVRCTQATPEGQEYALCEPCSF*KPPVHP
Trigger: GGGATGGACAGGGGGTTTTCAAAAGGAACATGGCTC...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR TCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGACAGATGGCTCTTATaGCTGTACCATTTGTTTGCC +
Preference number: 2 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMDRWLL*LYHLFA
Trigger: GGCAAACAAATGGTACAGTCATAAGAGCCATCTGTC...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR TCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCACATGGACACCTGTTCTaGGCCAAATATTTGGCTTAT +
Preference number: 2 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAHGHLF*AKYLAY
Trigger: ATAAGCCAAATATTTGGCTCAGAACAGGTGTCCATG...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR GCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGACTGTACCATTTGTTTaGCTGTGGACTGTTAGGGAC +
Preference number: 2 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMTVPFV*LWTVRD
Trigger: GTCCCTAACAGTCCACAGGCAAACAAATGGTACAGT...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGCAACTTCTCAGAGAGTaGGCACAAAACCCCAGGGGG +
Preference number: 2 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLQLLRE*AQNPRG
Trigger: CCCCCTGGGGTTTTGTGCCCACTCTCTGAGAAGTTG...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCATCTGAGCCAAATATTTaGCTTATAGTTGCCCACAGC +
Preference number: 2 (lower is better)
Translates to: CSALPRVVSLCDSRPLAASEPNI*LIVAHS
Trigger: GCTGTGGGCAACTATAAGCCAAATATTTGGCTCAGA...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTGCTCTGCCCAGAGTaGTGTCTCTTTGCGATTCCA +
Preference number: 2 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSLLCPE*CLFAIP
Trigger: TGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAG...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR TCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCTACACAAGCAACACCTaGGGGGCAAGAGTATGCTTT +
Preference number: 2 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLYTSNT*GARVCF
Trigger: AAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTA...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGCTGCTCTGCCCAGAGTaGTGTCTCTTTGCGATTCCA +
Preference number: 2 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLLLCPE*CLFAIP
Trigger: TGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAG...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR TCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAAGACAGATGGCTCTTATaGCTGTACCATTTGTTTGCC +
Preference number: 2 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQDRWLL*LYHLFA
Trigger: GGCAAACAAATGGTACAGTCATAAGAGCCATCTGTC...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR GCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAAACTGTACCATTTGTTTaGCTGTGGACTGTTAGGGAC +
Preference number: 2 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQTVPFV*LWTVRD
Trigger: GTCCCTAACAGTCCACAGGCAAACAAATGGTACAGT...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR GCA 90 bp TTTGAAGCCTTTGTTACAGTCACACTGACAGCTGGTTGGCACCTCAGGACATCTAGAGTGGTGTCTCTTTaGGATTCCAGGCCGTTGGCT +
Preference number: 2 (lower is better)
Translates to: FEAFVTVTLTAGWHLRTSRVVSL*DSRPLA
Trigger: AGCCAACGGCCTGGAATCGCAAAGAGACACCACTCT...AGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAAAGGCTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR-3UTR CCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCCCATTTGTTTGCCTGTaGACTGTTAGGGACAGGAAA +
Preference number: 2 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLPFVCL*TVRDRK
Trigger: TTTCCTGTCCCTAACAGTCCACAGGCAAACAAATGG...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCGTGAAGCCGAATGGATaGGTACGATGTACACAAGCA +
Preference number: 2 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSVKPNG*VRCTQA
Trigger: TGCTTGTGTACATCGTACCCATCCATTCGGCTTCAC...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR TCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCCCATATAGCTCTGAGTaGGCCATGTTCCTTTTGAAA +
Preference number: 2 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLPYSSE*AMFLLK
Trigger: TTTCAAAAGGAACATGGCTCACTCAGAGCTATATGG...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR TCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCGACAGATGGCTCTTATaGCTGTACCATTTGTTTGCC +
Preference number: 2 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSDRWLL*LYHLFA
Trigger: GGCAAACAAATGGTACAGTCATAAGAGCCATCTGTC...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR TCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCCATGGACACCTGTTCTaGGCCAAATATTTGGCTTAT +
Preference number: 2 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLHGHLF*AKYLAY
Trigger: ATAAGCCAAATATTTGGCTCAGAACAGGTGTCCATG...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR TCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCGCCGTTGGCTGCAGGTaGAGCCGAATGGATGGGTAC +
Preference number: 2 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSAVGCR*SRMDGY
Trigger: GTACCCATCCATTCGGCTTCACCTGCAGCCAACGGC...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR-3UTR GCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCTATTTGGCTTATAGTTaGCCACAGCCATGTAGCTCT +
Preference number: 2 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLYLAYS*PQPCSS
Trigger: AGAGCTACATGGCTGTGGGCAACTATAAGCCAAATA...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCCATTTGTTTGCCTGTaGACTGTTAGGGACAGGAAA +
Preference number: 2 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSPFVCL*TVRDRK
Trigger: TTTCCTGTCCCTAACAGTCCACAGGCAAACAAATGG...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCACGTTCCTCTGGGCGTaGGTCCGTGACAGATGGCTC +
Preference number: 2 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSTFLWA*VRDRWL
Trigger: GAGCCATCTGTCACGGACCCACGCCCAGAGGAACGT...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR-3UTR CCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCTCTGAGCCAAATATTTaGCTTATAGTTGCCCACAGC +
Preference number: 2 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLSEPNI*LIVAHS
Trigger: GCTGTGGGCAACTATAAGCCAAATATTTGGCTCAGA...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR TCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGGACAGATGGCTCTTATaGCTGTACCATTTGTTTGCC +
Preference number: 2 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLDRWLL*LYHLFA
Trigger: GGCAAACAAATGGTACAGTCATAAGAGCCATCTGTC...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR TCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCATGGACACCTGTTCTaGGCCAAATATTTGGCTTAT +
Preference number: 2 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSHGHLF*AKYLAY
Trigger: ATAAGCCAAATATTTGGCTCAGAACAGGTGTCCATG...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGCCATTTGTTTGCCTGTaGACTGTTAGGGACAGGAAA +
Preference number: 2 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLPFVCL*TVRDRK
Trigger: TTTCCTGTCCCTAACAGTCCACAGGCAAACAAATGG...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCTCTGAGCCAAATATTTaGCTTATAGTTGCCCACAGC +
Preference number: 2 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSSEPNI*LIVAHS
Trigger: GCTGTGGGCAACTATAAGCCAAATATTTGGCTCAGA...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCGCGATTCCAGGCCGTTaGCTGCAGGTGAAGCCGAAT +
Preference number: 2 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSAIPGR*LQVKPN
Trigger: ATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGC...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR-3UTR GCA 90 bp TTTGAAGCCTTTGTTACAGTCACACTGACAGCTGGTTGGCACCTCAGGACATCTACTGTACCATTTGTTTaGCTGTGGACTGTTAGGGAC +
Preference number: 2 (lower is better)
Translates to: FEAFVTVTLTAGWHLRTSTVPFV*LWTVRD
Trigger: GTCCCTAACAGTCCACAGGCAAACAAATGGTACAGT...AGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAAAGGCTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR-3UTR GCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTATTTGGCTTATAGTTaGCCACAGCCATGTAGCTCT +
Preference number: 2 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLYLAYS*PQPCSS
Trigger: AGAGCTACATGGCTGTGGGCAACTATAAGCCAAATA...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCGGCCAACCAGGACCATaGAAGGTAGGGAAAAGGGGA +
Preference number: 2 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSGQPGP*KVGKRG
Trigger: TCCCCTTTTCCCTACCTTCCATGGTCCTGGTTGGCC...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR-3UTR CCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCCTCAGGACTAGTCTCTaGCCCTCCAACACTCTGTCC +
Preference number: 2 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSLRTSL*PSNTLS
Trigger: GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAG...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR-3UTR TCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCGAGCCATGTTCCTTTTaGAAACCCCCTGTCCATCCC +
Preference number: 2 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSEPCSF*KPPVHP
Trigger: GGGATGGACAGGGGGTTTTCAAAAGGAACATGGCTC...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR-3UTR TCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCCAGGAAAGGGGCACATaGCTAGAATGGGGCTTGATG +
Preference number: 2 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSQERGT*LEWGLM
Trigger: CATCAAGCCCCATTCTAGTCATGTGCCCCTTTCCTG...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR-3UTR GCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCTACCCTGCTCTGCTCTaGCCAGAGTGGTGTCTCTTT +
Preference number: 2 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSYPALL*PEWCLF
Trigger: AAAGAGACACCACTCTGGGCAGAGCAGAGCAGGGTA...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR-3UTR CCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCGCAGGTGAAGCCGAATaGATGGGTACGATGTACACA +
Preference number: 2 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSAGEAE*MGTMYT
Trigger: TGTGTACATCGTACCCATCCATTCGGCTTCACCTGC...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR-3UTR CCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCGTGAAGCCGAATGGATaGGTACGATGTACACAAGCA +
Preference number: 2 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSVKPNG*VRCTQA
Trigger: TGCTTGTGTACATCGTACCCATCCATTCGGCTTCAC...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR-3UTR TCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCCCATATAGCTCTGAGTaGGCCATGTTCCTTTTGAAA +
Preference number: 2 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSPYSSE*AMFLLK
Trigger: TTTCAAAAGGAACATGGCTCACTCAGAGCTATATGG...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR CCA 72 bp TGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTaGCTGCAGGTGAAGCCGAATGGATGGGTACGATGT +
Preference number: 3 (lower is better)
Translates to: CPEWCLFAIPGR*LQVKPNGWVRC
Trigger: ACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CAA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGGCAAGAGTATGCTTaGTGCTTCTGGGAGAATCAC +
Preference number: 3 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAGQEYA*CFWENH
Trigger: GTGATTCTCCCAGAAGCACAAAGCATACTCTTGCCC...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CAA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCCAGAGTGGTGTCTCTTaGCGATTCCAGGCCGTTGGC +
Preference number: 3 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLQSGVS*RFQAVG
Trigger: GCCAACGGCCTGGAATCGCAAAGAGACACCACTCTG...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR CCA 72 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATaGGTACGATGTACACAAGCAACACCTGAGGGGCAA +
Preference number: 3 (lower is better)
Translates to: IPGRWLQVKPNG*VRCTQATPEGQ
Trigger: TTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CAA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGAGGATCGTTCTTTTTaGTCCCATGGACACCTGTTC +
Preference number: 3 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAEDRSF*SHGHLF
Trigger: GAACAGGTGTCCATGGGACAAAAAAGAACGATCCTC...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CAA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTGCGATTCCAGGCCGTaGGCTGCAGGTGAAGCCGAA +
Preference number: 3 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLCDSRP*AAGEAE
Trigger: TTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCA...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR TCA 72 bp GGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTaGAGCCGAATGGATGGGTACGATGTACACAAGCAA +
Preference number: 3 (lower is better)
Translates to: GVSLRFQAVGCR*SRMDGYDVHKQ
Trigger: TTGCTTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CAA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGCAGAGTGGTGTCTCTTaGCGATTCCAGGCCGTTGGC +
Preference number: 3 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLQSGVS*RFQAVG
Trigger: GCCAACGGCCTGGAATCGCAAAGAGACACCACTCTG...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR TCA 72 bp TTCCTCTGGGCGTGGGTCCGTGACAGATGGCTCTTATaGCTGTACCATTTGTTTGCCTGTGGACTGTTAGGG +
Preference number: 3 (lower is better)
Translates to: FLWAWVRDRWLL*LYHLFACGLLG
Trigger: CCCTAACAGTCCACAGGCAAACAAATGGTACAGTCATAAGAGCCATCTGTCACGGACCCACGCCCAGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR TCA 72 bp GCCGAATGGATGGGTACGATGTACACAAGCAACACCTaGGGGGCAAGAGTATGCTTTGTGCTTCTGGGAGAA +
Preference number: 3 (lower is better)
Translates to: AEWMGTMYTSNT*GARVCFVLLGE
Trigger: TTCTCCCAGAAGCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCCATTCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR-3UTR CAA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCGAGGATCGTTCTTTTTaGTCCCATGGACACCTGTTC +
Preference number: 3 (lower is better)
Translates to: GWVRCTQATPEGQEYALCEDRSF*SHGHLF
Trigger: GAACAGGTGTCCATGGGACAAAAAAGAACGATCCTC...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
3UTR TCA 72 bp GTCACACTGACAGCTGGTTGGCACCTCAGGACATCTTaGCATCACTTAAGTTGTAGCCTCAACACCAGGTTT +
Preference number: 3 (lower is better)
Translates to: VTLTAGWHLRTS*HHLSCSLNTRF
Trigger: AAACCTGGTGTTGAGGCTACAACTTAAGTGATGTCAAGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR TCA 72 bp TTCTTGACAGATTTGAAGCCTTTGTTACAGTCACACTaGCAGCTGGTTGGCACCTCAGGACATCTTGACATC +
Preference number: 3 (lower is better)
Translates to: FLTDLKPLLQSH*QLVGTSGHLDI
Trigger: GATGTCAAGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAAAGGCTTCAAATCTGTCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR-3UTR CAA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCGGGCAAGAGTATGCTTaGTGCTTCTGGGAGAATCAC +
Preference number: 3 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSGQEYA*CFWENH
Trigger: GTGATTCTCCCAGAAGCACAAAGCATACTCTTGCCC...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
3UTR GCA 72 bp AAAACTATATCCTATTTTCTCAGCCACTGTACAAGTTaGTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCC +
Preference number: 3 (lower is better)
Translates to: KTISYFLSHCTS*CFHLRTSLWPS
Trigger: GGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACAGTGGCTGAGAAAATAGGATATAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGGGCCCGCAGGCACCTTaGCAGGAGCGGGCGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQGPQAP*QERAPG
Trigger: TCCTGGCGCCCGCTCCTGCCAAGGTGCCTGCGGGCC...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373831.7
ENST00000649185.1
CDS-3UTR CCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGTCACCCAGCCCCAGCTaGCCCACGTCGCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQSPSPS*PTSPWP
Trigger: AGGCCAGGGCGACGTGGGCCAGCTGGGGCTGGGTGA...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCATCACCCAGCCCCAGCTaGCCCACGTCGCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAASPSPS*PTSPWP
Trigger: AGGCCAGGGCGACGTGGGCCAGCTGGGGCTGGGTGA...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGGGCACACGGCCTAGCTaGCCCTGTTCCCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQGTRPS*PCSPQP
Trigger: GGGCTGCGGGGAACAGGGCCAGCTAGGCCGTGTGCC...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAGGCCATCCCAGGATCTaGATGTGGCGCGCTCCCGGG +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRGHPRI*MWRAPG
Trigger: CCCGGGAGCGCGCCACATGCAGATCCTGGGATGGCC...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373832.5
CDS-3UTR CCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGTCACCCAGCCCCAGCTaGCCCACGTCGCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMSPSPS*PTSPWP
Trigger: AGGCCAGGGCGACGTGGGCCAGCTGGGGCTGGGTGA...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGCACACGGCCTAGCTaGCCCTGTTCCCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMGTRPS*PCSPQP
Trigger: GGGCTGCGGGGAACAGGGCCAGCTAGGCCGTGTGCC...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCGAGCCCGGCGGCCCCTaGCGGCCATCCCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLEPGGP*RPSQDL
Trigger: CAGATCCTGGGATGGCCGCCAGGGGCCGCCGGGCTC...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373832.5
CDS-3UTR GCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAGTCGTTCGAGGCCTTaGCGGCCACCACGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQSRSRP*RPPRLA
Trigger: TGCCAACCGTGGTGGCCGGCAAGGCCTCGAACGACT...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCGGCACACGGCCTAGCTaGCCCTGTTCCCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLGTRPS*PCSPQP
Trigger: GGGCTGCGGGGAACAGGGCCAGCTAGGCCGTGTGCC...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGATGCCCAGCTGGTAGTTaGTGCCCATGCCCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRCPAGS*CPCPRR
Trigger: TCGCCTGGGGCATGGGCACCAACTACCAGCTGGGCA...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGGTGAGGGCTGCTGTGTaGCTGTCTCCTGCTGACACC +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQVRAAV*LSPADT
Trigger: GGTGTCAGCAGGAGACAGTCACACAGCAGCCCTCAC...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGCACGGCCATCATCGGTaGGGGCTGCTGTGTGACTGT +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQHGHHR*GLLCDC
Trigger: ACAGTCACACAGCAGCCCTCACCGATGATGGCCGTG...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGACACGGCCATCATCGGTaGGGGCTGCTGTGTGACTGT +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRHGHHR*GLLCDC
Trigger: ACAGTCACACAGCAGCCCTCACCGATGATGGCCGTG...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAAGGCCCGCTGCCATCTaGAGCTGTCACTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRRPAAI*SCHCFP
Trigger: AGGGAAGCAGTGACAGCTGCAGATGGCAGCGGGCCT...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAGGCCCGCTGCCATCTaGAGCTGTCACTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQRPAAI*SCHCFP
Trigger: AGGGAAGCAGTGACAGCTGCAGATGGCAGCGGGCCT...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAAGGCCCGCTGCCATCTaGAGCTGTCACTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAARPAAI*SCHCFP
Trigger: AGGGAAGCAGTGACAGCTGCAGATGGCAGCGGGCCT...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGACAGGAACTGACACAGTaGTCAGGGCTGGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRQELTQ*SGLGRG
Trigger: GCCTCTCCCCAGCCCTGAGCACTGTGTCAGTTCCTG...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGACCCCATACCCTGCTCTaGTCTGCCCAGAGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRPHTLL*SAQSGV
Trigger: GACACCACTCTGGGCAGAGCAGAGCAGGGTATGGGG...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCACCCCATACCCTGCTCTaGTCTGCCCAGAGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAPHTLL*SAQSGV
Trigger: GACACCACTCTGGGCAGAGCAGAGCAGGGTATGGGG...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGATCCTGGAATCTCACGTaGCCCCGGCTTCCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRSWNLT*PRLPLD
Trigger: ATCCAGGGGAAGCCGGGGCCACGTGAGATTCCAGGA...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGCCGAAGCCGTACACGTaGCCCTCATGGGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQPKPYT*PSWEMA
Trigger: TGCCATCTCCCATGAGGGCCACGTGTACGGCTTCGG...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCACCGAAGCCGTACACGTaGCCCTCATGGGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAPKPYT*PSWEMA
Trigger: TGCCATCTCCCATGAGGGCCACGTGTACGGCTTCGG...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAACGTTCCTCTGGGCGTaGGTCCGTGACAGATGGCTC +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRTFLWA*VRDRWL
Trigger: GAGCCATCTGTCACGGACCCACGCCCAGAGGAACGT...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGTGAGGGCTGCTGTGTaGCTGTCTCCTGCTGACACC +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMVRAAV*LSPADT
Trigger: GGTGTCAGCAGGAGACAGTCACACAGCAGCCCTCAC...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCACTGGGCGTGGGTCCGTaGCAGATGGCTCTTATGACT +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAALGVGP*QMALMT
Trigger: AGTCATAAGAGCCATCTGTCACGGACCCACGCCCAG...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGACCAAGCCGGGTTCTGTaGTGTGGGACCTGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRPSRVL*CGTCVR
Trigger: TCTCACACAGGTCCCACAGCACAGAACCCGGCTTGG...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCACCAAGCCGGGTTCTGTaGTGTGGGACCTGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAPSRVL*CGTCVR
Trigger: TCTCACACAGGTCCCACAGCACAGAACCCGGCTTGG...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAGGTAGTTGGTGCCCATaGCCCAGGCGAAAACACGAC +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRGSWCP*PRRKHD
Trigger: GTCGTGTTTTCGCCTGGGGCATGGGCACCAACTACC...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGGGTAGTTGGTGCCCATaGCCCAGGCGAAAACACGAC +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQGSWCP*PRRKHD
Trigger: GTCGTGTTTTCGCCTGGGGCATGGGCACCAACTACC...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCCAGAGCATGCGCTCTaGAGGCCTCTGGCCCCGACC +
Preference number: 4 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSPEHAL*RPLAPT
Trigger: GGTCGGGGCCAGAGGCCTGCAGAGCGCATGCTCTGG...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373832.5
CDS-3UTR GCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGCGCCGGGCCGCGAACTaGCCCAGAGCATGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLRRAAN*PRACAL
Trigger: CAGAGCGCATGCTCTGGGGCAGTTCGCGGCCCGGCG...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373832.5
CDS-3UTR GCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGCCCCATACCCTGCTCTaGTCTGCCCAGAGTGGTGTC +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMPHTLL*SAQSGV
Trigger: GACACCACTCTGGGCAGAGCAGAGCAGGGTATGGGG...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGCCGGGTTCTGTGCTGTaGGACCTGTGTGAGACTGGT +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQPGSVL*DLCETG
Trigger: ACCAGTCTCACACAGGTCCCACAGCACAGAACCCGG...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373831.7
ENST00000649185.1
CDS-3UTR CCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGGGCACACGGCCTAGCTaGCCCTGTTCCCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLGTRPS*PCSPQP
Trigger: GGGCTGCGGGGAACAGGGCCAGCTAGGCCGTGTGCC...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGGCCGGCCACCACGGTTaGCAAATAACTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQAGHHG*QITQAH
Trigger: GTGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGC...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAGCCGGCCACCACGGTTaGCAAATAACTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRAGHHG*QITQAH
Trigger: GTGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGC...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGCCACAAAAGGCATCCTaGAATCTCACGTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQPQKAS*NLTWPR
Trigger: CCGGGGCCACGTGAGATTCCAGGATGCCTTTTGTGG...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGACCACAAAAGGCATCCTaGAATCTCACGTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRPQKAS*NLTWPR
Trigger: CCGGGGCCACGTGAGATTCCAGGATGCCTTTTGTGG...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGCCGAAGCCGTACACGTaGCCCTCATGGGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMPKPYT*PSWEMA
Trigger: TGCCATCTCCCATGAGGGCCACGTGTACGGCTTCGG...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCACCGGGTTCTGTGCTGTaGGACCTGTGTGAGACCTTC +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAPGSVL*DLCETF
Trigger: GAAGGTCTCACACAGGTCCCACAGCACAGAACCCGG...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
CDS-3UTR CCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAGCGATTCCAGGCCGTTaGCTGCAGGTGAAGCCGAAT +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRAIPGR*LQVKPN
Trigger: ATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGC...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGCGATTCCAGGCCGTTaGCTGCAGGTGAAGCCGAAT +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAAIPGR*LQVKPN
Trigger: ATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGC...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGGCGATTCCAGGCCGTTaGCTGCAGGTGAAGCCGAAT +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQAIPGR*LQVKPN
Trigger: ATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGC...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGTCTTCCTGTCCTTGGTaGACGTCGGCCACAAGGAAC +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQSSCPW*TSATRN
Trigger: GTTCCTTGTGGCCGACGTGCACCAAGGACAGGAAGA...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373831.7
ENST00000373832.5
CDS-3UTR GCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGATCTTCCTGTCCTTGGTaGACGTCGGCCACAAGGAAC +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRSSCPW*TSATRN
Trigger: GTTCCTTGTGGCCGACGTGCACCAAGGACAGGAAGA...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373831.7
ENST00000373832.5
CDS-3UTR GCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGCCAAGCCGGGTTCTGTaGTGTGGGACCTGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMPSRVL*CGTCVR
Trigger: TCTCACACAGGTCCCACAGCACAGAACCCGGCTTGG...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAATCATCGGTGAGGGCTaGTGTGTGACTGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRIIGEG*CVTVSC
Trigger: GCAGGAGACAGTCACACAGCAGCCCTCACCGATGAT...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAATCATCGGTGAGGGCTaGTGTGTGACTGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAIIGEG*CVTVSC
Trigger: GCAGGAGACAGTCACACAGCAGCCCTCACCGATGAT...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGACCTGCACAGGCACCATaGTCTTCTTCATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRPAQAP*SSSWAP
Trigger: TGGAGCCCATGAAGAAGAGCATGGTGCCTGTGCAGG...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGCCTGCACAGGCACCATaGTCTTCTTCATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQPAQAP*SSSWAP
Trigger: TGGAGCCCATGAAGAAGAGCATGGTGCCTGTGCAGG...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCACCTGCACAGGCACCATaGTCTTCTTCATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAPAQAP*SSSWAP
Trigger: TGGAGCCCATGAAGAAGAGCATGGTGCCTGTGCAGG...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAGGTTCTCCAGCTGTTTaGCCATCATCTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRGSPAV*PSSPQG
Trigger: GCCCTGTGGAGATGATGGGCAAACAGCTGGAGAACC...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTTCTCCAGCTGTTTaGCCATCATCTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAGSPAV*PSSPQG
Trigger: GCCCTGTGGAGATGATGGGCAAACAGCTGGAGAACC...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGGGTTCTCCAGCTGTTTaGCCATCATCTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQGSPAV*PSSPQG
Trigger: GCCCTGTGGAGATGATGGGCAAACAGCTGGAGAACC...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAACATCTTCCTGTCCTTaGTGCACGTCGGCCACAAGG +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRTSSCP*CTSATR
Trigger: CCTTGTGGCCGACGTGCACCAAGGACAGGAAGATGT...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373831.7
ENST00000373832.5
CDS-3UTR CCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGCAACATCCTCCGGAATaGATACCAGGGCCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQQHPPE*IPGPAS
Trigger: AGAAGCCGGCCCTGGTATCCATTCCGGAGGATGTTG...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGACAACATCCTCCGGAATaGATACCAGGGCCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRQHPPE*IPGPAS
Trigger: AGAAGCCGGCCCTGGTATCCATTCCGGAGGATGTTG...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAATGCCCAGCTGGTAGTTaGTGCCCATGCCCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQCPAGS*CPCPRR
Trigger: TCGCCTGGGGCATGGGCACCAACTACCAGCTGGGCA...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCTGCCCAGCTGGTAGTTaGTGCCCATGCCCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLCPAGS*CPCPRR
Trigger: TCGCCTGGGGCATGGGCACCAACTACCAGCTGGGCA...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGTATGCTGGCCCCCGCTaGACACAGATAAGACCACAC +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQYAGPR*TQIRPH
Trigger: GTGTGGTCTTATCTGTGTCCAGCGGGGGCCAGCATA...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCATATGCTGGCCCCCGCTaGACACAGATAAGACCACAC +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAYAGPR*TQIRPH
Trigger: GTGTGGTCTTATCTGTGTCCAGCGGGGGCCAGCATA...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGACAACTTCTCAGAGAGTaGGCACAAAACCCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRQLLRE*AQNPRG
Trigger: CCCCCTGGGGTTTTGTGCCCACTCTCTGAGAAGTTG...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGACTCAGGACTAGTCTCTaGCCCTCCAACACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRLRTSL*PSNTLS
Trigger: GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAG...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAGCTATGCGCTTGGGTaGCATCTTCCTGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQSYALG*HLPVLG
Trigger: ACCAAGGACAGGAAGATGTCACCCAAGCGCATAGCT...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373831.7
ENST00000373832.5
CDS-3UTR TCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAAGTGAGGGCTGCTGTGTaGCTGTCTCCTGCTGACACC +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQVRAAV*LSPADT
Trigger: GGTGTCAGCAGGAGACAGTCACACAGCAGCCCTCAC...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCCACGGCCATCATCGGTaGGGGCTGCTGTGTGACTGT +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLHGHHR*GLLCDC
Trigger: ACAGTCACACAGCAGCCCTCACCGATGATGGCCGTG...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAACACGGCCATCATCGGTaGGGGCTGCTGTGTGACTGT +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQHGHHR*GLLCDC
Trigger: ACAGTCACACAGCAGCCCTCACCGATGATGGCCGTG...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCACAGGAAAGGGGCACATaGCTAGAATGGGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAQERGT*LEWGLM
Trigger: CATCAAGCCCCATTCTAGTCATGTGCCCCTTTCCTG...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAAGCCGTTGGCTGCAGGTaGAGCCGAATGGATGGGTAC +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQAVGCR*SRMDGY
Trigger: GTACCCATCCATTCGGCTTCACCTGCAGCCAACGGC...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGAGCTATGCGCTTGGGTaGCATCTTCCTGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMSYALG*HLPVLS
Trigger: GGAGAGGACAGGAAGATGTCACCCAAGCGCATAGCT...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000649185.1
CDS-3UTR GCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAGGGCACCCTCATCATTaGAGCCGAAGGAATAGACCT +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRGHPHH*SRRNRP
Trigger: AGGTCTATTCCTTCGGCTGCAATGATGAGGGTGCCC...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGATGTACCACCTTCTCTTaGAGCTCCACTTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRCTTFS*SSTFPG
Trigger: CCCTGGGAAAGTGGAGCTGCAAGAGAAGGTGGTACA...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGTGTACCACCTTCTCTTaGAGCTCCACTTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQCTTFS*SSTFPG
Trigger: CCCTGGGAAAGTGGAGCTGCAAGAGAAGGTGGTACA...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCAGTCGTTCGAGGCCTTaGCGGCCACCACGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: GWVRCTQATPEGQEYALCSRSRP*RPPRLA
Trigger: TGCCAACCGTGGTGGCCGGCAAGGCCTCGAACGACT...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAGAGTGGTGTCTCTTTaGGATTCCAGGCCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQRVVSL*DSRPLA
Trigger: AGCCAACGGCCTGGAATCGCAAAGAGACACCACTCT...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGATACCCTGCTCTGCTCTaGCCAGAGTGGTGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRYPALL*PEWCLF
Trigger: AAAGAGACACCACTCTGGGCAGAGCAGAGCAGGGTA...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCATACCCTGCTCTGCTCTaGCCAGAGTGGTGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAYPALL*PEWCLF
Trigger: AAAGAGACACCACTCTGGGCAGAGCAGAGCAGGGTA...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGCAACATCCTCCGGAATaGATACCAGGGCCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMQHPPE*IPGPAS
Trigger: AGAAGCCGGCCCTGGTATCCATTCCGGAGGATGTTG...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGTCAGCATCACACACTTaGGGACCAGGAGTCGTTCGA +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQSASHT*GPGVVR
Trigger: TCGAACGACTCCTGGTCCCCAAGTGTGTGATGCTGA...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGATCAGCATCACACACTTaGGGACCAGGAGTCGTTCGA +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRSASHT*GPGVVR
Trigger: TCGAACGACTCCTGGTCCCCAAGTGTGTGATGCTGA...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCATCAGCATCACACACTTaGGGACCAGGAGTCGTTCGA +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAASASHT*GPGVVR
Trigger: TCGAACGACTCCTGGTCCCCAAGTGTGTGATGCTGA...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAATCCTGGAATCTCACGTaGCCCCGGCTTCCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQSWNLT*PRLPLD
Trigger: ATCCAGGGGAAGCCGGGGCCACGTGAGATTCCAGGA...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCCCGAAGCCGTACACGTaGCCCTCATGGGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLPKPYT*PSWEMA
Trigger: TGCCATCTCCCATGAGGGCCACGTGTACGGCTTCGG...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCTGCCCAGCTGGTAGTTaGTGCCCATGCCCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: GWVRCTQATPEGQEYALCCPAGS*CPCPRR
Trigger: TCGCCTGGGGCATGGGCACCAACTACCAGCTGGGCA...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGACTGCTCTGCCCAGAGTaGTGTCTCTTTGCGATTCCA +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRLLCPE*CLFAIP
Trigger: TGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAG...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGCTCAGGACTAGTCTCTaGCCCTCCAACACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMLRTSL*PSNTLS
Trigger: GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAG...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAAGTCACACTGACAGCTaGTTGGCACCTCAGGACATC +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAASHTDS*LAPQDI
Trigger: GATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACT...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR TCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAGGGAGATGGCAAAGGTaGAATAGGCACCACAAAAGG +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRGRWQR*NRHHKR
Trigger: CCTTTTGTGGTGCCTATTTCACCTTTGCCATCTCCC...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGGGGAGATGGCAAAGGTaGAATAGGCACCACAAAAGG +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQGRWQR*NRHHKR
Trigger: CCTTTTGTGGTGCCTATTTCACCTTTGCCATCTCCC...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGCAGGAAAGGGGCACATaGCTAGAATGGGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMQERGT*LEWGLM
Trigger: CATCAAGCCCCATTCTAGTCATGTGCCCCTTTCCTG...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAACTGGGCGTGGGTCCGTaGCAGATGGCTCTTATGACT +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQLGVGP*QMALMT
Trigger: AGTCATAAGAGCCATCTGTCACGGACCCACGCCCAG...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGTTGTTACAGTCACACTaGCAGCTGGTTGGCACCTCA +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQLLQSH*QLVGTS
Trigger: TGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAA...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR GCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAAGACCTGGCCACTTTTaGTTAGACACACGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRRPGHF*LDTRCA
Trigger: TGCACACCGTGTGTCTAAGCAAAAGTGGCCAGGTCT...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAGACCTGGCCACTTTTaGTTAGACACACGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQRPGHF*LDTRCA
Trigger: TGCACACCGTGTGTCTAAGCAAAAGTGGCCAGGTCT...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGTGTACCACCTTCTCTTaGAGCTCCACTTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMCTTFS*SSTFPG
Trigger: CCCTGGGAAAGTGGAGCTGCAAGAGAAGGTGGTACA...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGAGTCGTTCGAGGCCTTaGCGGCCACCACGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLSRSRP*RPPRLA
Trigger: TGCCAACCGTGGTGGCCGGCAAGGCCTCGAACGACT...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCGGTAGTTGGTGCCCATaGCCCAGGCGAAAACACGAC +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLGSWCP*PRRKHD
Trigger: GTCGTGTTTTCGCCTGGGGCATGGGCACCAACTACC...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGACTAATAAGACTGTATaGTGGCCCCCGCTGGACACA +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQTNKTV*WPPLDT
Trigger: TGTGTCCAGCGGGGGCCAGCATACAGTCTTATTAGT...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAACTAATAAGACTGTATaGTGGCCCCCGCTGGACACA +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRTNKTV*WPPLDT
Trigger: TGTGTCCAGCGGGGGCCAGCATACAGTCTTATTAGT...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAACTAATAAGACTGTATaGTGGCCCCCGCTGGACACA +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAATNKTV*WPPLDT
Trigger: TGTGTCCAGCGGGGGCCAGCATACAGTCTTATTAGT...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCAGGAACTGACACAGTaGTCAGGGCTGGGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSQELTQ*SGLGRG
Trigger: GCCTCTCCCCAGCCCTGAGCACTGTGTCAGTTCCTG...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGAGAGTGGTGTCTCTTTaGGATTCCAGGCCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMRVVSL*DSRPLA
Trigger: AGCCAACGGCCTGGAATCGCAAAGAGACACCACTCT...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCACTCCAAGTTTACCTCTaGCTCCATCATGGACTCCTC +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAALQVYL*LHHGLL
Trigger: GAGGAGTCCATGATGGAGGCAGAGGTAAACTTGGAG...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000649185.1
CDS-3UTR CCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCGCCGGCCACCACGGTTaGCAAATAACTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLAGHHG*QITQAH
Trigger: GTGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGC...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGTCAGCATCACACACTTaGGGACCAGGAGTCGTTCGA +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMSASHT*GPGVVR
Trigger: TCGAACGACTCCTGGTCCCCAAGTGTGTGATGCTGA...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCTCCTGGAATCTCACGTaGCCCCGGCTTCCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSSWNLT*PRLPLD
Trigger: ATCCAGGGGAAGCCGGGGCCACGTGAGATTCCAGGA...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCTCCTGGAATCTCACGTaGCCCCGGCTTCCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: GWVRCTQATPEGQEYALCSWNLT*PRLPLD
Trigger: ATCCAGGGGAAGCCGGGGCCACGTGAGATTCCAGGA...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCCGAAGCCGTACACGTaGCCCTCATGGGAGATGGCA +
Preference number: 4 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSPKPYT*PSWEMA
Trigger: TGCCATCTCCCATGAGGGCCACGTGTACGGCTTCGG...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAAAACACGACCATCCTTaGTCACAGCATACCCCACAG +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRKHDHP*SQHTPQ
Trigger: CTGTGGGGTATGCTGTGACCAAGGATGGTCGTGTTT...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAAACACGACCATCCTTaGTCACAGCATACCCCACAG +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQKHDHP*SQHTPQ
Trigger: CTGTGGGGTATGCTGTGACCAAGGATGGTCGTGTTT...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTGCCCAGCTGGTAGTTaGTGCCCATGCCCCAGGCGA +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLCPAGS*CPCPRR
Trigger: TCGCCTGGGGCATGGGCACCAACTACCAGCTGGGCA...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAATAAGACTGTATGCTaGCCCCCGCTGGACACAGAT +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQNKTVC*PPLDTD
Trigger: ATCTGTGTCCAGCGGGGGCCAGCATACAGTCTTATT...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAAATAAGACTGTATGCTaGCCCCCGCTGGACACAGAT +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRNKTVC*PPLDTD
Trigger: ATCTGTGTCCAGCGGGGGCCAGCATACAGTCTTATT...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCCCGGGTTCTGTGCTGTaGGACCTGTGTGAGACCTTC +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLPGSVL*DLCETF
Trigger: GAAGGTCTCACACAGGTCCCACAGCACAGAACCCGG...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
CDS-3UTR CCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCACGTTCCTCTGGGCGTaGGTCCGTGACAGATGGCTC +
Preference number: 4 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSTFLWA*VRDRWL
Trigger: GAGCCATCTGTCACGGACCCACGCCCAGAGGAACGT...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCTTCTGCACGTTCCTCTaGGCGTGGGTCCGTGACAGA +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLFCTFL*AWVRDR
Trigger: TCTGTCACGGACCCACGCCCAGAGGAACGTGCAGAA...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAGCAGGTGAAGCCGAATaGATGGGTACGATGTACACA +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRAGEAE*MGTMYT
Trigger: TGTGTACATCGTACCCATCCATTCGGCTTCACCTGC...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGATTTCCCAGCAGTGCCTaGCACATAATATGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRFPSSA*HIICAP
Trigger: GGGAGCACATATTATGTGCCAGGCACTGCTGGGAAA...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR TCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCTGGCCCCGACCCGGGTaGGAAAGGAAAACAAAGAGC +
Preference number: 4 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSWPRPG*ERKTKS
Trigger: GCTCTTTGTTTTCCTTTCTCACCCGGGTCGGGGCCA...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373832.5
CDS-3UTR TCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCCTGGGCGTGGGTCCGTaGCAGATGGCTCTTATGACT +
Preference number: 4 (lower is better)
Translates to: GWVRCTQATPEGQEYALCLGVGP*QMALMT
Trigger: AGTCATAAGAGCCATCTGTCACGGACCCACGCCCAG...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGGCCGTTGGCTGCAGGTaGAGCCGAATGGATGGGTAC +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLAVGCR*SRMDGY
Trigger: GTACCCATCCATTCGGCTTCACCTGCAGCCAACGGC...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCGGTAGTTGGTGCCCATaGCCCAGGCGAAAACACGAC +
Preference number: 4 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSGSWCP*PRRKHD
Trigger: GTCGTGTTTTCGCCTGGGGCATGGGCACCAACTACC...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAAGGTTCTCCAGCTGTTTaGCCATCATCTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQGSPAV*PSSPQG
Trigger: GCCCTGTGGAGATGATGGGCAAACAGCTGGAGAACC...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGAATGTCTATTGCGCGTaGGCAGAAGCATGCGCAGTT +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMNVYCA*AEACAV
Trigger: AACTGCGCATGCTTCTGCGCACGCGCAATAGACATT...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398958.6
CDS-3UTR CCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCCGGGTTCTGTGCTGTaGGACCTGTGTGAGACTGGT +
Preference number: 4 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSPGSVL*DLCETG
Trigger: ACCAGTCTCACACAGGTCCCACAGCACAGAACCCGG...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000649185.1
CDS-3UTR CCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCCAACATCCTCCGGAATaGATACCAGGGCCGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLQHPPE*IPGPAS
Trigger: AGAAGCCGGCCCTGGTATCCATTCCGGAGGATGTTG...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGAATAAGACTGTATGCTaGCCCCCGCTGGACACAGAT +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMNKTVC*PPLDTD
Trigger: ATCTGTGTCCAGCGGGGGCCAGCATACAGTCTTATT...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCGGCCAACCAGGACCATaGAAGGTAGGGAAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLGQPGP*KVGKRG
Trigger: TCCCCTTTTCCCTACCTTCCATGGTCCTGGTTGGCC...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAAGGCCAACCAGGACCATaGAAGGTAGGGAAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQGQPGP*KVGKRG
Trigger: TCCCCTTTTCCCTACCTTCCATGGTCCTGGTTGGCC...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCCAACTTCTCAGAGAGTaGGCACAAAACCCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLQLLRE*AQNPRG
Trigger: CCCCCTGGGGTTTTGTGCCCACTCTCTGAGAAGTTG...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGTGAAGCCGAATGGATaGGTACGATGTACACAAGCA +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAVKPNG*VRCTQA
Trigger: TGCTTGTGTACATCGTACCCATCCATTCGGCTTCAC...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGGTGAAGCCGAATGGATaGGTACGATGTACACAAGCA +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQVKPNG*VRCTQA
Trigger: TGCTTGTGTACATCGTACCCATCCATTCGGCTTCAC...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGCAGGTGAAGCCGAATaGATGGGTACGATGTACACA +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMAGEAE*MGTMYT
Trigger: TGTGTACATCGTACCCATCCATTCGGCTTCACCTGC...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGTTTCCCAGCAGTGCCTaGCACATAATATGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMFPSSA*HIICAP
Trigger: GGGAGCACATATTATGTGCCAGGCACTGCTGGGAAA...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR TCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAACTTGGTGGAATTCTTaGAGGATGTTAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRTWWNS*RMLGSG
Trigger: CCCAGAACCTAACATCCTTCAAGAATTCCACCAAGT...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAAGAGCCATGTTCCTTTTaGAAACCCCCTGTCCATCCC +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQEPCSF*KPPVHP
Trigger: GGGATGGACAGGGGGTTTTCAAAAGGAACATGGCTC...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCGAGCCATGTTCCTTTTaGAAACCCCCTGTCCATCCC +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLEPCSF*KPPVHP
Trigger: GGGATGGACAGGGGGTTTTCAAAAGGAACATGGCTC...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAGACAGATGGCTCTTATaGCTGTACCATTTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRDRWLL*LYHLFA
Trigger: GGCAAACAAATGGTACAGTCATAAGAGCCATCTGTC...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGTACACAAGCAACACCTaGGGGGCAAGAGTATGCTTT +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMYTSNT*GARVCF
Trigger: AAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTA...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCAGCTATGCGCTTGGGTaGCATCTTCCTGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GWVRCTQATPEGQEYALCSYALG*HLPVLS
Trigger: GGAGAGGACAGGAAGATGTCACCCAAGCGCATAGCT...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000649185.1
CDS-3UTR TCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCACACCTCAGGACATCTTaGCATCACTTAAGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAHLRTS*HHLSCS
Trigger: GCTACAACTTAAGTGATGTCAAGATGTCCTGAGGTG...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR GCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAAGGGCACCCTCATCATTaGAGCCGAAGGAATAGACCT +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQGHPHH*SRRNRP
Trigger: AGGTCTATTCCTTCGGCTGCAATGATGAGGGTGCCC...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCCCTGCACAGGCACCATaGTCTTCTTCATGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GWVRCTQATPEGQEYALCPAQAP*SSSWAP
Trigger: TGGAGCCCATGAAGAAGAGCATGGTGCCTGTGCAGG...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TTTGAAGCCTTTGTTACAGTCACACTGACAGCTGGTTGGCACCTCAGGACATCTAGGCCCGCTGCCATCTaGAGCTGTCACTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: FEAFVTVTLTAGWHLRTSRPAAI*SCHCFP
Trigger: AGGGAAGCAGTGACAGCTGCAGATGGCAGCGGGCCT...AGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAAAGGCTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR GCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAACTGTACCATTTGTTTaGCTGTGGACTGTTAGGGAC +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAATVPFV*LWTVRD
Trigger: GTCCCTAACAGTCCACAGGCAAACAAATGGTACAGT...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCAGAGTGGTGTCTCTTTaGGATTCCAGGCCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLRVVSL*DSRPLA
Trigger: AGCCAACGGCCTGGAATCGCAAAGAGACACCACTCT...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAAAGAGTGGTGTCTCTTTaGGATTCCAGGCCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQRVVSL*DSRPLA
Trigger: AGCCAACGGCCTGGAATCGCAAAGAGACACCACTCT...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAATACCCTGCTCTGCTCTaGCCAGAGTGGTGTCTCTTT +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQYPALL*PEWCLF
Trigger: AAAGAGACACCACTCTGGGCAGAGCAGAGCAGGGTA...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAGCCACTGTACAAGTTaGTGTTTCCATCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQSHCTS*CFHLRT
Trigger: AGTCCTGAGATGGAAACAGCAACTTGTACAGTGGCT...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGTGCCAAAATGCGAAGTaGAGATCGTCTTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQCQNAK*RSSSLQ
Trigger: TTGGAGAGAAGACGATCTGCACTTCGCATTTTGGCA...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGTGTCTTTCCCAGCAGTaGCTGGCACATAATATGTGC +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMCLSQQ*LAHNMC
Trigger: GCACATATTATGTGCCAGGCACTGCTGGGAAAGACA...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR CCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCACATCTTCCTGTCCTTaGTGCACGTCGGCCACAAGG +
Preference number: 4 (lower is better)
Translates to: GWVRCTQATPEGQEYALCTSSCP*CTSATR
Trigger: CCTTGTGGCCGACGTGCACCAAGGACAGGAAGATGT...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373832.5
CDS-3UTR CCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAATCAGCATCACACACTTaGGGACCAGGAGTCGTTCGA +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQSASHT*GPGVVR
Trigger: TCGAACGACTCCTGGTCCCCAAGTGTGTGATGCTGA...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGCCACAAAAGGCATCCTaGAATCTCACGTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLPQKAS*NLTWPR
Trigger: CCGGGGCCACGTGAGATTCCAGGATGCCTTTTGTGG...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCTATGCTGGCCCCCGCTaGACACAGATAAGACCACAC +
Preference number: 4 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSYAGPR*TQIRPH
Trigger: GTGTGGTCTTATCTGTGTCCAGCGGGGGCCAGCATA...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCAACTTCTCAGAGAGTaGGCACAAAACCCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSQLLRE*AQNPRG
Trigger: CCCCCTGGGGTTTTGTGCCCACTCTCTGAGAAGTTG...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCACCATTTGTTTGCCTGTaGACTGTTAGGGACAGGAAA +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAPFVCL*TVRDRK
Trigger: TTTCCTGTCCCTAACAGTCCACAGGCAAACAAATGG...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCCTGCTCTGCCCAGAGTaGTGTCTCTTTGCGATTCCA +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLLLCPE*CLFAIP
Trigger: TGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAG...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCGGGAGATGGCAAAGGTaGAATAGGCACCACAAAAGG +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLGRWQR*NRHHKR
Trigger: CCTTTTGTGGTGCCTATTTCACCTTTGCCATCTCCC...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCAGGAAAGGGGCACATaGCTAGAATGGGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSQERGT*LEWGLM
Trigger: CATCAAGCCCCATTCTAGTCATGTGCCCCTTTCCTG...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGCATGGACACCTGTTCTaGGCCAAATATTTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQHGHLF*AKYLAY
Trigger: ATAAGCCAAATATTTGGCTCAGAACAGGTGTCCATG...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCTTGTTACAGTCACACTaGCAGCTGGTTGGCACCTCA +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLLLQSH*QLVGTS
Trigger: TGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAA...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR GCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAAAGACCTGGCCACTTTTaGTTAGACACACGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQRPGHF*LDTRCA
Trigger: TGCACACCGTGTGTCTAAGCAAAAGTGGCCAGGTCT...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGATCATCGGTGAGGGCTaGTGTGTGACTGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLIIGEG*CVTVSC
Trigger: GCAGGAGACAGTCACACAGCAGCCCTCACCGATGAT...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TTTGAAGCCTTTGTTACAGTCACACTGACAGCTGGTTGGCACCTCAGGACATCTGGTAGTTGGTGCCCATaGCCCAGGCGAAAACACGAC +
Preference number: 4 (lower is better)
Translates to: FEAFVTVTLTAGWHLRTSGSWCP*PRRKHD
Trigger: GTCGTGTTTTCGCCTGGGGCATGGGCACCAACTACC...AGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAAAGGCTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR GCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAAACTAATAAGACTGTATaGTGGCCCCCGCTGGACACA +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQTNKTV*WPPLDT
Trigger: TGTGTCCAGCGGGGGCCAGCATACAGTCTTATTAGT...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCATATTTGGCTTATAGTTaGCCACAGCCATGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAYLAYS*PQPCSS
Trigger: AGAGCTACATGGCTGTGGGCAACTATAAGCCAAATA...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGAGCCACTGTACAAGTTaGTGTTTCCATCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMSHCTS*CFHLRT
Trigger: AGTCCTGAGATGGAAACAGCAACTTGTACAGTGGCT...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCCTCCAAGTTTACCTCTaGCTCCATCATGGACTCCTC +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLLQVYL*LHHGLL
Trigger: GAGGAGTCCATGATGGAGGCAGAGGTAAACTTGGAG...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000649185.1
CDS-3UTR GCA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGCTGGCACATAATATGTaGTCCCTTAAAAAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQLAHNM*SLKKQG
Trigger: TCCCTGCTTTTTAAGGGAGCACATATTATGTGCCAG...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR GCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCTCCTGGAATGTCTATTaGGCGTGCGCAGAAGCATGC +
Preference number: 4 (lower is better)
Translates to: GWVRCTQATPEGQEYALCSWNVY*ACAEAC
Trigger: GCATGCTTCTGCGCACGCGCAATAGACATTCCAGGA...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398958.6
CDS-3UTR GCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGTTAAACCTTACGAAGTaGCCGGAAGTCCTGGAATGT +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMLNLTK*PEVLEC
Trigger: ACATTCCAGGACTTCCGGGCACTTCGTAAGGTTTAA...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAAAAACACGACCATCCTTaGTCACAGCATACCCCACAG +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQKHDHP*SQHTPQ
Trigger: CTGTGGGGTATGCTGTGACCAAGGATGGTCGTGTTT...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCAAACACGACCATCCTTaGTCACAGCATACCCCACAG +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLKHDHP*SQHTPQ
Trigger: CTGTGGGGTATGCTGTGACCAAGGATGGTCGTGTTT...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCAATAAGACTGTATGCTaGCCCCCGCTGGACACAGAT +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLNKTVC*PPLDTD
Trigger: ATCTGTGTCCAGCGGGGGCCAGCATACAGTCTTATT...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp TTTGAAGCCTTTGTTACAGTCACACTGACAGCTGGTTGGCACCTCAGGACATCTCCGGGTTCTGTGCTGTaGGACCTGTGTGAGACCTTC +
Preference number: 4 (lower is better)
Translates to: FEAFVTVTLTAGWHLRTSPGSVL*DLCETF
Trigger: GAAGGTCTCACACAGGTCCCACAGCACAGAACCCGG...AGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAAAGGCTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR CCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGGGCCAACCAGGACCATaGAAGGTAGGGAAAAGGGGA +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLGQPGP*KVGKRG
Trigger: TCCCCTTTTCCCTACCTTCCATGGTCCTGGTTGGCC...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp TTTGAAGCCTTTGTTACAGTCACACTGACAGCTGGTTGGCACCTCAGGACATCTTTCTGCACGTTCCTCTaGGCGTGGGTCCGTGACAGA +
Preference number: 4 (lower is better)
Translates to: FEAFVTVTLTAGWHLRTSFCTFL*AWVRDR
Trigger: TCTGTCACGGACCCACGCCCAGAGGAACGTGCAGAA...AGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAAAGGCTTCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR CCA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGATCTGAGCCAAATATTTaGCTTATAGTTGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: LLPCSVREVVQDRSQALRSEPNI*LIVAHS
Trigger: GCTGTGGGCAACTATAAGCCAAATATTTGGCTCAGA...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAAGCAGGTGAAGCCGAATaGATGGGTACGATGTACACA +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQAGEAE*MGTMYT
Trigger: TGTGTACATCGTACCCATCCATTCGGCTTCACCTGC...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCAGTCACACTGACAGCTaGTTGGCACCTCAGGACATC +
Preference number: 4 (lower is better)
Translates to: GWVRCTQATPEGQEYALCSHTDS*LAPQDI
Trigger: GATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACT...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR TCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGAGCTATGCGCTTGGGTaGCATCTTCCTGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLSYALG*HLPVLG
Trigger: ACCAAGGACAGGAAGATGTCACCCAAGCGCATAGCT...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373832.5
CDS-3UTR TCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGCCATATAGCTCTGAGTaGGCCATGTTCCTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMPYSSE*AMFLLK
Trigger: TTTCAAAAGGAACATGGCTCACTCAGAGCTATATGG...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGGGGCACCCTCATCATTaGAGCCGAAGGAATAGACCT +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLGHPHH*SRRNRP
Trigger: AGGTCTATTCCTTCGGCTGCAATGATGAGGGTGCCC...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TTTGAAGCCTTTGTTACAGTCACACTGACAGCTGGTTGGCACCTCAGGACATCTATCATCGGTGAGGGCTaGTGTGTGACTGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: FEAFVTVTLTAGWHLRTSIIGEG*CVTVSC
Trigger: GCAGGAGACAGTCACACAGCAGCCCTCACCGATGAT...AGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAAAGGCTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR GCA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGCTGGCACATAATATGTaGTCCCTTAAAAAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMLAHNM*SLKKQG
Trigger: TCCCTGCTTTTTAAGGGAGCACATATTATGTGCCAG...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR CCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCAAACACGACCATCCTTaGTCACAGCATACCCCACAG +
Preference number: 4 (lower is better)
Translates to: GWVRCTQATPEGQEYALCKHDHP*SQHTPQ
Trigger: CTGTGGGGTATGCTGTGACCAAGGATGGTCGTGTTT...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp TTTGAAGCCTTTGTTACAGTCACACTGACAGCTGGTTGGCACCTCAGGACATCTCTCAGGACTAGTCTCTaGCCCTCCAACACTCTGTCC +
Preference number: 4 (lower is better)
Translates to: FEAFVTVTLTAGWHLRTSLRTSL*PSNTLS
Trigger: GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAG...AGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAAAGGCTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR CCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCCCTCTGCCTCCATCATaGACTCCTCTTTTGGATGAT +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLPLPPS*TPLLDD
Trigger: ATCATCCAAAAGAGGAGTCCATGATGGAGGCAGAGG...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000649185.1
CDS-3UTR CCA 90 bp TTTGAAGCCTTTGTTACAGTCACACTGACAGCTGGTTGGCACCTCAGGACATCTAGTGCCCGGAAGTCCTaGAATGTCTATTGCGCGTGC +
Preference number: 4 (lower is better)
Translates to: FEAFVTVTLTAGWHLRTSSARKS*NVYCAC
Trigger: GCACGCGCAATAGACATTCCAGGACTTCCGGGCACT...AGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAAAGGCTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398958.6
CDS-3UTR TCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGGGGAGATGGCAAAGGTaGAATAGGCACCACAAAAGG +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLGRWQR*NRHHKR
Trigger: CCTTTTGTGGTGCCTATTTCACCTTTGCCATCTCCC...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCACTTGGTGGAATTCTTaGAGGATGTTAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLTWWNS*RMLGSG
Trigger: CCCAGAACCTAACATCCTTCAAGAATTCCACCAAGT...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCTACACAAGCAACACCTaGGGGGCAAGAGTATGCTTT +
Preference number: 4 (lower is better)
Translates to: GWVRCTQATPEGQEYALCYTSNT*GARVCF
Trigger: AAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTA...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGAGACCTGGCCACTTTTaGTTAGACACACGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLRPGHF*LDTRCA
Trigger: TGCACACCGTGTGTCTAAGCAAAAGTGGCCAGGTCT...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TTTGAAGCCTTTGTTACAGTCACACTGACAGCTGGTTGGCACCTCAGGACATCTTGTACCACCTTCTCTTaGAGCTCCACTTTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: FEAFVTVTLTAGWHLRTSCTTFS*SSTFPG
Trigger: CCCTGGGAAAGTGGAGCTGCAAGAGAAGGTGGTACA...AGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAAAGGCTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR GCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCAGTCGTTCGAGGCCTTaGCGGCCACCACGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSSRSRP*RPPRLA
Trigger: TGCCAACCGTGGTGGCCGGCAAGGCCTCGAACGACT...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR GCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCTGTCTTTCCCAGCAGTaGCTGGCACATAATATGTGC +
Preference number: 4 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSCLSQQ*LAHNMC
Trigger: GCACATATTATGTGCCAGGCACTGCTGGGAAAGACA...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR GCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCAGAAGAAGCGACCACTaGGAATCTGTCTCCAAAAAG +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLRRSDH*ESVSKK
Trigger: CTTTTTGGAGACAGATTCGCAGTGGTCGCTTCTTCT...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGAATAAGACTGTATGCTaGCCCCCGCTGGACACAGAT +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLNKTVC*PPLDTD
Trigger: ATCTGTGTCCAGCGGGGGCCAGCATACAGTCTTATT...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAACCATTTGTTTGCCTGTaGACTGTTAGGGACAGGAAA +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQPFVCL*TVRDRK
Trigger: TTTCCTGTCCCTAACAGTCCACAGGCAAACAAATGG...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGGCAGGTGAAGCCGAATaGATGGGTACGATGTACACA +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLAGEAE*MGTMYT
Trigger: TGTGTACATCGTACCCATCCATTCGGCTTCACCTGC...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCACTTGGTGGAATTCTTaGAGGATGTTAGGTTCTGGG +
Preference number: 4 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSTWWNS*RMLGSG
Trigger: CCCAGAACCTAACATCCTTCAAGAATTCCACCAAGT...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAACCATATAGCTCTGAGTaGGCCATGTTCCTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQPYSSE*AMFLLK
Trigger: TTTCAAAAGGAACATGGCTCACTCAGAGCTATATGG...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCATGTCAATGCCAAAATaGGAAGTGCAGATCGTCTTC +
Preference number: 4 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLMSMPK*EVQIVF
Trigger: GAAGACGATCTGCACTTCGCATTTTGGCATTGACAT...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGCTCTCTCTCTCTCTCTaGTGTCTTCCTCCAAGATCT +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLLSLSL*CLPPRS
Trigger: AGATCTTGGAGGAAGACAGCAGAGAGAGAGAGAGAG...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000649185.1
CDS-3UTR GCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCTTAAACCTTACGAAGTaGCCGGAAGTCCTGGAATGT +
Preference number: 4 (lower is better)
Translates to: GWVRCTQATPEGQEYALCLNLTK*PEVLEC
Trigger: ACATTCCAGGACTTCCGGGCACTTCGTAAGGTTTAA...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCAGAAGAAGCGACCACTaGGAATCTGTCTCCAAAAAG +
Preference number: 4 (lower is better)
Translates to: GWVRCTQATPEGQEYALCRRSDH*ESVSKK
Trigger: CTTTTTGGAGACAGATTCGCAGTGGTCGCTTCTTCT...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCCCATTTGTTTGCCTGTaGACTGTTAGGGACAGGAAA +
Preference number: 4 (lower is better)
Translates to: GWVRCTQATPEGQEYALCPFVCL*TVRDRK
Trigger: TTTCCTGTCCCTAACAGTCCACAGGCAAACAAATGG...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGGTGAAGCCGAATGGATaGGTACGATGTACACAAGCA +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLVKPNG*VRCTQA
Trigger: TGCTTGTGTACATCGTACCCATCCATTCGGCTTCAC...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGCCTCTGCCTCCATCATaGACTCCTCTTTTGGATGAT +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLPLPPS*TPLLDD
Trigger: ATCATCCAAAAGAGGAGTCCATGATGGAGGCAGAGG...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000649185.1
CDS-3UTR TCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCCATATAGCTCTGAGTaGGCCATGTTCCTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSPYSSE*AMFLLK
Trigger: TTTCAAAAGGAACATGGCTCACTCAGAGCTATATGG...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR TCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCCATGGACACCTGTTCTaGGCCAAATATTTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: GWVRCTQATPEGQEYALCHGHLF*AKYLAY
Trigger: ATAAGCCAAATATTTGGCTCAGAACAGGTGTCCATG...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGACTGTACCATTTGTTTaGCTGTGGACTGTTAGGGAC +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLTVPFV*LWTVRD
Trigger: GTCCCTAACAGTCCACAGGCAAACAAATGGTACAGT...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGAGCCACTGTACAAGTTaGTGTTTCCATCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLSHCTS*CFHLRT
Trigger: AGTCCTGAGATGGAAACAGCAACTTGTACAGTGGCT...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTGCCAAAATGCGAAGTaGAGATCGTCTTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLCQNAK*RSSSLQ
Trigger: TTGGAGAGAAGACGATCTGCACTTCGCATTTTGGCA...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR GCA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCATGTCAATGCCAAAATaGGAAGTGCAGATCGTCTTC +
Preference number: 4 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSMSMPK*EVQIVF
Trigger: GAAGACGATCTGCACTTCGCATTTTGGCATTGACAT...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCGCCGGCCACCACGGTTaGCAAATAACTCAGGCACAC +
Preference number: 4 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSAGHHG*QITQAH
Trigger: GTGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGC...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR CCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCCCACAAAAGGCATCCTaGAATCTCACGTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSPQKAS*NLTWPR
Trigger: CCGGGGCCACGTGAGATTCCAGGATGCCTTTTGTGG...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR CCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCTTCTGCACGTTCCTCTaGGCGTGGGTCCGTGACAGA +
Preference number: 4 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSFCTFL*AWVRDR
Trigger: TCTGTCACGGACCCACGCCCAGAGGAACGTGCAGAA...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR TCA 90 bp TTTGAAGCCTTTGTTACAGTCACACTGACAGCTGGTTGGCACCTCAGGACATCTCACCTCAGGACATCTTaGCATCACTTAAGTTGTAGC +
Preference number: 4 (lower is better)
Translates to: FEAFVTVTLTAGWHLRTSHLRTS*HHLSCS
Trigger: GCTACAACTTAAGTGATGTCAAGATGTCCTGAGGTG...AGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAAAGGCTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR GCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCGGTTCTCCAGCTGTTTaGCCATCATCTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSGSPAV*PSSPQG
Trigger: GCCCTGTGGAGATGATGGGCAAACAGCTGGAGAACC...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR GCA 90 bp TTTGAAGCCTTTGTTACAGTCACACTGACAGCTGGTTGGCACCTCAGGACATCTAGCCACTGTACAAGTTaGTGTTTCCATCTCAGGACT +
Preference number: 4 (lower is better)
Translates to: FEAFVTVTLTAGWHLRTSSHCTS*CFHLRT
Trigger: AGTCCTGAGATGGAAACAGCAACTTGTACAGTGGCT...AGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAAAGGCTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR GCA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCTTAAAAGATCCACCCTaGCTCTATTGTACTATGCAG +
Preference number: 4 (lower is better)
Translates to: GWVRCTQATPEGQEYALCLKDPP*LYCTMQ
Trigger: CTGCATAGTACAATAGAGGCAGGGTGGATCTTTTAA...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373833.10
CDS-3UTR CCA 90 bp TTTGAAGCCTTTGTTACAGTCACACTGACAGCTGGTTGGCACCTCAGGACATCTTCTGAGCCAAATATTTaGCTTATAGTTGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: FEAFVTVTLTAGWHLRTSSEPNI*LIVAHS
Trigger: GCTGTGGGCAACTATAAGCCAAATATTTGGCTCAGA...AGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAAAGGCTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR GCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCACTGTACCATTTGTTTaGCTGTGGACTGTTAGGGAC +
Preference number: 4 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSTVPFV*LWTVRD
Trigger: GTCCCTAACAGTCCACAGGCAAACAAATGGTACAGT...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR GCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCTGCCAAAATGCGAAGTaGAGATCGTCTTCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSCQNAK*RSSSLQ
Trigger: TTGGAGAGAAGACGATCTGCACTTCGCATTTTGGCA...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR TCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCCATGGACACCTGTTCTaGGCCAAATATTTGGCTTAT +
Preference number: 4 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSHGHLF*AKYLAY
Trigger: ATAAGCCAAATATTTGGCTCAGAACAGGTGTCCATG...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR GCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCTATTTGGCTTATAGTTaGCCACAGCCATGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSYLAYS*PQPCSS
Trigger: AGAGCTACATGGCTGTGGGCAACTATAAGCCAAATA...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR GCA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCATGTCAATGCCAAAATaGGAAGTGCAGATCGTCTTC +
Preference number: 4 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSMSMPK*EVQIVF
Trigger: GAAGACGATCTGCACTTCGCATTTTGGCATTGACAT...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS GCA 90 bp ACGTCGGCCACAAGGAACTCCGGCGCTCCCCGCCGGGCCGCGAACTaGCCCAGAGCATGCGCTCTGCAGGCCTCTGGCCCCGACCCGGGT +
Preference number: 5 (lower is better)
Translates to: TSATRNSGAPRRAAN*PRACALQASGPDPG
Trigger: ACCCGGGTCGGGGCCAGAGGCCTGCAGAGCGCATGCTCTGGGGCAGTTCGCGGCCCGGCGGGGAGCGCCGGAGTTCCTTGTGGCCGACGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373832.5
CDS GCA 90 bp GCTCCTACGACCCACCCTCTCCCGGGCAGGGCTCCCTCCCCGATCTaGAAACCGCCTTCTCCAAGCGCATGCCGGACAAAACCATCCTCC +
Preference number: 5 (lower is better)
Translates to: APTTHPLPGRAPSPI*KPPSPSACRTKPSS
Trigger: GGAGGATGGTTTTGTCCGGCATGCGCTTGGAGAAGGCGGTTTGCAGATCGGGGAGGGAGCCCTGCCCGGGAGAGGGTGGGTCGTAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486790.2
CDS CCA 90 bp ACTTGGGGACCAGGAGTCGTTCGAGGCCTTGCCGGCCACCACGGTTaGCAAATAACTCAGGCACACGGCCTAGCTGGCCCTGTTCCCCGC +
Preference number: 5 (lower is better)
Translates to: TWGPGVVRGLAGHHG*QITQAHGLAGPVPR
Trigger: GCGGGGAACAGGGCCAGCTAGGCCGTGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGCAAGGCCTCGAACGACTCCTGGTCCCCAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000411533.5
ENST00000419074.5
ENST00000427469.5
ENST00000430407.1
ENST00000434290.6
ENST00000649185.1
ENST00000683442.1
CDS-3UTR CAA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAGAGTCGTTCGAGGCCTaGCCGGCCACCACGGTTGGC +
Preference number: 5 (lower is better)
Translates to: LLPCSVREVVQDRSQALRESFEA*PATTVG
Trigger: GCCAACCGTGGTGGCCGGCAAGGCCTCGAACGACTC...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGAGTCGTTCGAGGCCTaGCCGGCCACCACGGTTGGC +
Preference number: 5 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMESFEA*PATTVG
Trigger: GCCAACCGTGGTGGCCGGCAAGGCCTCGAACGACTC...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS GCA 90 bp TCCGTCGCCTGGGTTCAAGGGCATAGTTCGCTAATGACACGGGCCTaGTCTTCTCACTACTGTCCCCCAGCCCCGCAAGAGAGGGACGCA +
Preference number: 5 (lower is better)
Translates to: SVAWVQGHSSLMTRA*SSHYCPPAPQERDA
Trigger: TGCGTCCCTCTCTTGCGGGGCTGGGGGACAGTAGTGAGAAGAGCAGGCCCGTGTCATTAGCGAACTATGCCCTTGAACCCAGGCGACGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430407.1
ENST00000486790.2
CDS-3UTR CAA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCATGCGATTCCAGGCCGTaGGCTGCAGGTGAAGCCGAA +
Preference number: 5 (lower is better)
Translates to: CSALPRVVSLCDSRPLAACDSRP*AAGEAE
Trigger: TTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCA...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGGACATCTTCCTGTCCTaGGTGCACGTCGGCCACAAG +
Preference number: 5 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQDIFLS*VHVGHK
Trigger: CTTGTGGCCGACGTGCACCAAGGACAGGAAGATGTC...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373831.7
ENST00000373832.5
CDS-3UTR CAA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGACCAATCACACCGTTATaGTCCCGGAAGGAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: LLPCSVREVVQDRSQALRPITPL*SRKEPQ
Trigger: CTGGGGCTCCTTCCGGGACAATAACGGTGTGATTGG...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCACCAATCACACCGTTATaGTCCCGGAAGGAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAPITPL*SRKEPQ
Trigger: CTGGGGCTCCTTCCGGGACAATAACGGTGTGATTGG...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGATGCCGGCCACCACGGTaGGCAAATAACTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: LLPCSVREVVQDRSQALRCRPPR*ANNSGT
Trigger: TGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGCA...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCGAGTCGTTCGAGGCCTaGCCGGCCACCACGGTTGGC +
Preference number: 5 (lower is better)
Translates to: GWVRCTQATPEGQEYALCESFEA*PATTVG
Trigger: GCCAACCGTGGTGGCCGGCAAGGCCTCGAACGACTC...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCGAGTCGTTCGAGGCCTaGCCGGCCACCACGGTTGGC +
Preference number: 5 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSESFEA*PATTVG
Trigger: GCCAACCGTGGTGGCCGGCAAGGCCTCGAACGACTC...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGACAGAGTGGTGTCTCTTaGCGATTCCAGGCCGTTGGC +
Preference number: 5 (lower is better)
Translates to: LLPCSVREVVQDRSQALRQSGVS*RFQAVG
Trigger: GCCAACGGCCTGGAATCGCAAAGAGACACCACTCTG...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGCAGAGTGGTGTCTCTTaGCGATTCCAGGCCGTTGGC +
Preference number: 5 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQQSGVS*RFQAVG
Trigger: GCCAACGGCCTGGAATCGCAAAGAGACACCACTCTG...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS TCA 90 bp AGAGGCCGAAGCCGTACACGTGGCCCTCATGGGAGATGGCAAAGGTaGAATAGGCACCACAAAAGGCATCCTGGAATCTCACGTGGCCCC +
Preference number: 5 (lower is better)
Translates to: RGRSRTRGPHGRWQR*NRHHKRHPGISRGP
Trigger: GGGGCCACGTGAGATTCCAGGATGCCTTTTGTGGTGCCTATTTCACCTTTGCCATCTCCCATGAGGGCCACGTGTACGGCTTCGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000411533.5
ENST00000419074.5
ENST00000430407.1
ENST00000649185.1
ENST00000683442.1
CDS-3UTR CAA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGACATCTTCCTGTCCTaGGTGCACGTCGGCCACAAG +
Preference number: 5 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMDIFLS*VHVGHK
Trigger: CTTGTGGCCGACGTGCACCAAGGACAGGAAGATGTC...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373832.5
CDS-3UTR CAA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGCTGTACCACCTTCTCTaGCAGCTCCACTTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQLYHLL*QLHFPR
Trigger: CCTGGGAAAGTGGAGCTGCAAGAGAAGGTGGTACAG...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCACTGTACCACCTTCTCTaGCAGCTCCACTTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: CSALPRVVSLCDSRPLAALYHLL*QLHFPR
Trigger: CCTGGGAAAGTGGAGCTGCAAGAGAAGGTGGTACAG...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGGAGTCGTTCGAGGCCTaGCCGGCCACCACGGTTGGC +
Preference number: 5 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLESFEA*PATTVG
Trigger: GCCAACCGTGGTGGCCGGCAAGGCCTCGAACGACTC...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGTTCAGCATCACACACTaGGGGACCAGGAGTCGTTCG +
Preference number: 5 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQFSITH*GTRSRS
Trigger: CGAACGACTCCTGGTCCCCAAGTGTGTGATGCTGAA...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGCACACTGACAGCTGGTaGGCACCTCAGGACATCTTG +
Preference number: 5 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQHTDSW*APQDIL
Trigger: CAAGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTG...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR CAA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGGTCCTGGAATGTCTATaGCGCGTGCGCAGAAGCATG +
Preference number: 5 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQVLECL*RVRRSM
Trigger: CATGCTTCTGCGCACGCGCAATAGACATTCCAGGAC...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398958.6
CDS-3UTR CAA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGCTGTACCACCTTCTCTaGCAGCTCCACTTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMLYHLL*QLHFPR
Trigger: CCTGGGAAAGTGGAGCTGCAAGAGAAGGTGGTACAG...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGTTCAGCATCACACACTaGGGGACCAGGAGTCGTTCG +
Preference number: 5 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMFSITH*GTRSRS
Trigger: CGAACGACTCCTGGTCCCCAAGTGTGTGATGCTGAA...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAATGCGATTCCAGGCCGTaGGCTGCAGGTGAAGCCGAA +
Preference number: 5 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQCDSRP*AAGEAE
Trigger: TTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCA...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS GCA 90 bp AAGTGGTCGTTTCCTGAGGCCACCTTTACCACAGGCACATCCAGCTaGACCTGCACAGGCACCATGCTCTTCTTCATGGGCTCCAACAGT +
Preference number: 5 (lower is better)
Translates to: KWSFPEATFTTGTSS*TCTGTMLFFMGSNS
Trigger: ACTGTTGGAGCCCATGAAGAAGAGCATGGTGCCTGTGCAGGTGCAGCTGGATGTGCCTGTGGTAAAGGTGGCCTCAGGAAACGACCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000411533.5
ENST00000419074.5
ENST00000427469.5
ENST00000429051.1
ENST00000430407.1
ENST00000434290.6
ENST00000649185.1
ENST00000683442.1
CDS-3UTR CAA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGACTTTTAGCTATGCGCTaGGGTGACATCTTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: LLPCSVREVVQDRSQALRLLAMR*GDIFLS
Trigger: GGACAGGAAGATGTCACCCAAGCGCATAGCTAAAAG...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCACTTTTAGCTATGCGCTaGGGTGACATCTTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: CSALPRVVSLCDSRPLAALLAMR*GDIFLS
Trigger: GGACAGGAAGATGTCACCCAAGCGCATAGCTAAAAG...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCTGCCGGCCACCACGGTaGGCAAATAACTCAGGCACA +
Preference number: 5 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLCRPPR*ANNSGT
Trigger: TGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGCA...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAAAGCCCACCCAGGACTaGGTGGAATTCTTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: LLPCSVREVVQDRSQALRKPTQD*VEFLKD
Trigger: ATCCTTCAAGAATTCCACCAAGTCCTGGGTGGGCTT...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAAAACACGACCATCCTaGGTCACAGCATACCCCACA +
Preference number: 5 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQKTRPS*VTAYPT
Trigger: TGTGGGGTATGCTGTGACCAAGGATGGTCGTGTTTT...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCTGCGATTCCAGGCCGTaGGCTGCAGGTGAAGCCGAA +
Preference number: 5 (lower is better)
Translates to: GWVRCTQATPEGQEYALCCDSRP*AAGEAE
Trigger: TTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCA...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGACAGCCACTGTACAAGTaGCTGTTTCCATCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: LLPCSVREVVQDRSQALRQPLYK*LFPSQD
Trigger: GTCCTGAGATGGAAACAGCAACTTGTACAGTGGCTG...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGCAGCCACTGTACAAGTaGCTGTTTCCATCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQQPLYK*LFPSQD
Trigger: GTCCTGAGATGGAAACAGCAACTTGTACAGTGGCTG...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS GCA 90 bp ATCACACCGTTATTGTCCTTGGAAACTCTGAGATGCGACAATCCCTaGCTCCACACCTCCTTGCCCCATCCAAGCCTCTGGGAAGTGTGG +
Preference number: 5 (lower is better)
Translates to: ITPLLSLETLRCDNP*LHTSLPHPSLWEVW
Trigger: CCACACTTCCCAGAGGCTTGGATGGGGCAAGGAGGTGTGGAGGCAGGGATTGTCGCATCTCAGAGTTTCCAAGGACAATAACGGTGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434290.6
CDS-3UTR CAA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCCCAATCACACCGTTATaGTCCCGGAAGGAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: GWVRCTQATPEGQEYALCPITPL*SRKEPQ
Trigger: CTGGGGCTCCTTCCGGGACAATAACGGTGTGATTGG...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp ATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGGTACGATGTACACAATTCAGCATCACACACTaGGGGACCAGGAGTCGTTCG +
Preference number: 5 (lower is better)
Translates to: IPGRWLQVKPNGWVRCTQFSITH*GTRSRS
Trigger: CGAACGACTCCTGGTCCCCAAGTGTGTGATGCTGAA...TTGTGTACATCGTACCCATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGAAAACACGACCATCCTaGGTCACAGCATACCCCACA +
Preference number: 5 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMKTRPS*VTAYPT
Trigger: TGTGGGGTATGCTGTGACCAAGGATGGTCGTGTTTT...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCCTGTACCACCTTCTCTaGCAGCTCCACTTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: GWVRCTQATPEGQEYALCLYHLL*QLHFPR
Trigger: CCTGGGAAAGTGGAGCTGCAAGAGAAGGTGGTACAG...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGAGACTTGGTGGAATTCTaGAAGGATGTTAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: LLPCSVREVVQDRSQALRDLVEF*KDVRFW
Trigger: CCAGAACCTAACATCCTTCAAGAATTCCACCAAGTC...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGGACTTGGTGGAATTCTaGAAGGATGTTAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQDLVEF*KDVRFW
Trigger: CCAGAACCTAACATCCTTCAAGAATTCCACCAAGTC...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGGAGGATCGTTCTTTTTaGTCCCATGGACACCTGTTC +
Preference number: 5 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMEDRSF*SHGHLF
Trigger: GAACAGGTGTCCATGGGACAAAAAAGAACGATCCTC...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCCACACTGACAGCTGGTaGGCACCTCAGGACATCTTG +
Preference number: 5 (lower is better)
Translates to: GWVRCTQATPEGQEYALCHTDSW*APQDIL
Trigger: CAAGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTG...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR CAA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCCTTTTAGCTATGCGCTaGGGTGACATCTTCCTGTCC +
Preference number: 5 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLLLAMR*GDIFLS
Trigger: GGACAGGAAGATGTCACCCAAGCGCATAGCTAAAAG...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGCTGTACCACCTTCTCTaGCAGCTCCACTTTCCCAGG +
Preference number: 5 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLLYHLL*QLHFPR
Trigger: CCTGGGAAAGTGGAGCTGCAAGAGAAGGTGGTACAG...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTTCAGCATCACACACTaGGGGACCAGGAGTCGTTCG +
Preference number: 5 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLFSITH*GTRSRS
Trigger: CGAACGACTCCTGGTCCCCAAGTGTGTGATGCTGAA...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCAAGCCCACCCAGGACTaGGTGGAATTCTTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLKPTQD*VEFLKD
Trigger: ATCCTTCAAGAATTCCACCAAGTCCTGGGTGGGCTT...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCAAAACACGACCATCCTaGGTCACAGCATACCCCACA +
Preference number: 5 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLKTRPS*VTAYPT
Trigger: TGTGGGGTATGCTGTGACCAAGGATGGTCGTGTTTT...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCGGGCAAGAGTATGCTTaGTGCTTCTGGGAGAATCAC +
Preference number: 5 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLGQEYA*CFWENH
Trigger: GTGATTCTCCCAGAAGCACAAAGCATACTCTTGCCC...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS TCA 90 bp GGTGAAGGTGTTCTGAGAGCTGCCCTTCTCAATCTCCTCCCACAGTaGGGCCACCTCCCATCAGGATATGGACATTCTCACTTTACAGAT +
Preference number: 5 (lower is better)
Translates to: GEGVLRAALLNLLPQ*GHLPSGYGHSHFTD
Trigger: ATCTGTAAAGTGAGAATGTCCATATCCTGATGGGAGGTGGCCTCACTGTGGGAGGAGATTGAGAAGGGCAGCTCTCAGAACACCTTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478232.1
CDS-3UTR CAA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCAAGCCCACCCAGGACTaGGTGGAATTCTTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: GWVRCTQATPEGQEYALCKPTQD*VEFLKD
Trigger: ATCCTTCAAGAATTCCACCAAGTCCTGGGTGGGCTT...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCAAAACACGACCATCCTaGGTCACAGCATACCCCACA +
Preference number: 5 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSKTRPS*VTAYPT
Trigger: TGTGGGGTATGCTGTGACCAAGGATGGTCGTGTTTT...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCAAAACACGACCATCCTaGGTCACAGCATACCCCACA +
Preference number: 5 (lower is better)
Translates to: GWVRCTQATPEGQEYALCKTRPS*VTAYPT
Trigger: TGTGGGGTATGCTGTGACCAAGGATGGTCGTGTTTT...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGCTCTGTTCTTTGTCCTaGACTAATAAGACTGTATGC +
Preference number: 5 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQLCSLS*TNKTVC
Trigger: GCATACAGTCTTATTAGTCAAGGACAAAGAACAGAG...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp CTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGACATCAGCTCTGTTCTTaGTCCTTGACTAATAAGACT +
Preference number: 5 (lower is better)
Translates to: LLPCSVREVVQDRSQALRHQLCS*SLTNKT
Trigger: AGTCTTATTAGTCAAGGACAAAGAACAGAGCTGATG...TCTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp ACTGCTTCCCTGTTCTGTGAGGGAGGTTGTGCAGGACAGAAGCCAGGCCCTCAGCATCAGCTCTGTTCTTaGTCCTTGACTAATAAGACT +
Preference number: 5 (lower is better)
Translates to: TASLFCEGGCAGQKPGPQHQLCS*SLTNKT
Trigger: AGTCTTATTAGTCAAGGACAAAGAACAGAGCTGATG...CTGAGGGCCTGGCTTCTGTCCTGCACAACCTCCCTCACAGAACAGGGAAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCACATCAGCTCTGTTCTTaGTCCTTGACTAATAAGACT +
Preference number: 5 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAHQLCS*SLTNKT
Trigger: AGTCTTATTAGTCAAGGACAAAGAACAGAGCTGATG...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCGAGGATCGTTCTTTTTaGTCCCATGGACACCTGTTC +
Preference number: 5 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLEDRSF*SHGHLF
Trigger: GAACAGGTGTCCATGGGACAAAAAAGAACGATCCTC...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp GGATGGGTACGATGTACACAAGCAACACCTGAGGGGCAAGAGTATGCTTTGTGCGGGCAAGAGTATGCTTaGTGCTTCTGGGAGAATCAC +
Preference number: 5 (lower is better)
Translates to: GWVRCTQATPEGQEYALCGQEYA*CFWENH
Trigger: GTGATTCTCCCAGAAGCACAAAGCATACTCTTGCCC...GCACAAAGCATACTCTTGCCCCTCAGGTGTTGCTTGTGTACATCGTACCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGTCCACCCTGCCTCTATaGTACTATGCAGCATTTAAA +
Preference number: 5 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMSTLPL*YYAAFK
Trigger: TTTAAATGCTGCATAGTACAATAGAGGCAGGGTGGA...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373833.10
CDS-3UTR CAA 90 bp AGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCGACTTGGTGGAATTCTaGAAGGATGTTAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: SCCFHLRTSLWPSNTLSLDLVEF*KDVRFW
Trigger: CCAGAACCTAACATCCTTCAAGAATTCCACCAAGTC...GAGGGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGAAGCCCACCCAGGACTaGGTGGAATTCTTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLKPTQD*VEFLKD
Trigger: ATCCTTCAAGAATTCCACCAAGTCCTGGGTGGGCTT...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp GTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCAGGTGAAGCCGAATGGATGCTCTGTTCTTTGTCCTaGACTAATAAGACTGTATGC +
Preference number: 5 (lower is better)
Translates to: VVSLCDSRPLAAGEAEWMLCSLS*TNKTVC
Trigger: GCATACAGTCTTATTAGTCAAGGACAAAGAACAGAG...CATCCATTCGGCTTCACCTGCAGCCAACGGCCTGGAATCGCAAAGAGACACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCGAGGATCGTTCTTTTTaGTCCCATGGACACCTGTTC +
Preference number: 5 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSEDRSF*SHGHLF
Trigger: GAACAGGTGTCCATGGGACAAAAAAGAACGATCCTC...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGGGGCAAGAGTATGCTTaGTGCTTCTGGGAGAATCAC +
Preference number: 5 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLGQEYA*CFWENH
Trigger: GTGATTCTCCCAGAAGCACAAAGCATACTCTTGCCC...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGCAGCCACTGTACAAGTaGCTGTTTCCATCTCAGGAC +
Preference number: 5 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLQPLYK*LFPSQD
Trigger: GTCCTGAGATGGAAACAGCAACTTGTACAGTGGCTG...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp TGCTCTGCTCTGCCCAGAGTGGTGTCTCTTTGCGATTCCAGGCCGTTGGCTGCATACTTCTTGACAGATTaGAAGCCTTTGTTACAGTCA +
Preference number: 5 (lower is better)
Translates to: CSALPRVVSLCDSRPLAAYFLTD*KPLLQS
Trigger: TGACTGTAACAAAGGCTTCAAATCTGTCAAGAAGTA...TGCAGCCAACGGCCTGGAATCGCAAAGAGACACCACTCTGGGCAGAGCAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR CAA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCCCAATCACACCGTTATaGTCCCGGAAGGAGCCCCAG +
Preference number: 5 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSPITPL*SRKEPQ
Trigger: CTGGGGCTCCTTCCGGGACAATAACGGTGTGATTGG...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR CAA 90 bp TTTGAAGCCTTTGTTACAGTCACACTGACAGCTGGTTGGCACCTCAGGACATCTGACTTGGTGGAATTCTaGAAGGATGTTAGGTTCTGG +
Preference number: 5 (lower is better)
Translates to: FEAFVTVTLTAGWHLRTSDLVEF*KDVRFW
Trigger: CCAGAACCTAACATCCTTCAAGAATTCCACCAAGTC...AGATGTCCTGAGGTGCCAACCAGCTGTCAGTGTGACTGTAACAAAGGCTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR CAA 90 bp ACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGTCCCTCTGTTCTTTGTCCTaGACTAATAAGACTGTATGC +
Preference number: 5 (lower is better)
Translates to: TSCCFHLRTSLWPSNTLSLCSLS*TNKTVC
Trigger: GCATACAGTCTTATTAGTCAAGGACAAAGAACAGAG...GGACAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGCTCTGTTCTTTGTCCTaGACTAATAAGACTGTATGC +
Preference number: 5 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLLCSLS*TNKTVC
Trigger: GCATACAGTCTTATTAGTCAAGGACAAAGAACAGAG...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGCATCAGCTCTGTTCTTaGTCCTTGACTAATAAGACT +
Preference number: 5 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLHQLCS*SLTNKT
Trigger: AGTCTTATTAGTCAAGGACAAAGAACAGAGCTGATG...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
CDS-3UTR CAA 90 bp TGTACAAGTTGCTGTTTCCATCTCAGGACTAGTCTCTGGCCCTCCAACACTCTGACTTTTCCTTACTTCTaGACAGATTTGAAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: CTSCCFHLRTSLWPSNTLTFPYF*TDLKPL
Trigger: CAAAGGCTTCAAATCTGTCAAGAAGTAAGGAAAAGT...CAGAGTGTTGGAGGGCCAGAGACTAGTCCTGAGATGGAAACAGCAACTTGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR CAA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCTACTTCTTGACAGATTaGAAGCCTTTGTTACAGTCA +
Preference number: 5 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSYFLTD*KPLLQS
Trigger: TGACTGTAACAAAGGCTTCAAATCTGTCAAGAAGTA...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS-3UTR CAA 90 bp CACTTAAGTTGTAGCCTCAACACCAGGTTTATAGTTTATTCTGTCTTTCCCAGCACTTTTCCTTACTTCTaGACAGATTTGAAGCCTTTG +
Preference number: 5 (lower is better)
Translates to: HLSCSLNTRFIVYSVFPSTFPYF*TDLKPL
Trigger: CAAAGGCTTCAAATCTGTCAAGAAGTAAGGAAAAGT...GCTGGGAAAGACAGAATAAACTATAAACCTGGTGTTGAGGCTACAACTTAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373833.10
ENST00000398958.6
CDS CCA 72 bp CGGGTGAGAAAGGAAAACAAAGAGCCCGGCGGCCCCTaGCGGCCATCCCAGGATCTGCATGTGGCGCGCTCC +
Preference number: 6 (lower is better)
Translates to: RVRKENKEPGGP*RPSQDLHVARS
Trigger: GGAGCGCGCCACATGCAGATCCTGGGATGGCCGCCAGGGGCCGCCGGGCTCTTTGTTTTCCTTTCTCACCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373832.5
CDS GCA 72 bp ACCCACCCTCTCCCGGGCAGGGCTCCCTCCCCGATCTaGAAACCGCCTTCTCCAAGCGCATGCCGGACAAAA +
Preference number: 6 (lower is better)
Translates to: THPLPGRAPSPI*KPPSPSACRTK
Trigger: TTTTGTCCGGCATGCGCTTGGAGAAGGCGGTTTGCAGATCGGGGAGGGAGCCCTGCCCGGGAGAGGGTGGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486790.2
CDS CAA 90 bp CACTTGGGGACCAGGAGTCGTTCGAGGCCTTGCCGGCCACCACGGTaGGCAAATAACTCAGGCACACGGCCTAGCTGGCCCTGTTCCCCG +
Preference number: 6 (lower is better)
Translates to: HLGTRSRSRPCRPPR*ANNSGTRPSWPCSP
Trigger: CGGGGAACAGGGCCAGCTAGGCCGTGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGCAAGGCCTCGAACGACTCCTGGTCCCCAAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000411533.5
ENST00000419074.5
ENST00000427469.5
ENST00000430407.1
ENST00000434290.6
ENST00000649185.1
ENST00000683442.1
CDS GCA 72 bp CCCTCCCCGATCTGCAAACCGCCTTCTCCAAGCGCATaGCGGACAAAACCATCCTCCTCGCGGCAGAGACCC +
Preference number: 6 (lower is better)
Translates to: PSPICKPPSPSA*RTKPSSSRQRP
Trigger: GGGTCTCTGCCGCGAGGAGGATGGTTTTGTCCGGCATGCGCTTGGAGAAGGCGGTTTGCAGATCGGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486790.2
CDS CCA 72 bp CCAGGAGTCGTTCGAGGCCTTGCCGGCCACCACGGTTaGCAAATAACTCAGGCACACGGCCTAGCTGGCCCT +
Preference number: 6 (lower is better)
Translates to: PGVVRGLAGHHG*QITQAHGLAGP
Trigger: AGGGCCAGCTAGGCCGTGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGCAAGGCCTCGAACGACTCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000411533.5
ENST00000419074.5
ENST00000427469.5
ENST00000430407.1
ENST00000434290.6
ENST00000649185.1
ENST00000683442.1
CDS CAA 72 bp ACCAGGAGTCGTTCGAGGCCTTGCCGGCCACCACGGTaGGCAAATAACTCAGGCACACGGCCTAGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: TRSRSRPCRPPR*ANNSGTRPSWP
Trigger: GGGCCAGCTAGGCCGTGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGCAAGGCCTCGAACGACTCCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000411533.5
ENST00000419074.5
ENST00000427469.5
ENST00000430407.1
ENST00000434290.6
ENST00000649185.1
ENST00000683442.1
CDS CCA 72 bp AGGCGTCCTCATCCTGCCCTGTGCCCAGCTGGTAGTTaGTGCCCATGCCCCAGGCGAAAACACGACCATCCT +
Preference number: 6 (lower is better)
Translates to: RRPHPALCPAGS*CPCPRRKHDHP
Trigger: AGGATGGTCGTGTTTTCGCCTGGGGCATGGGCACCAACTACCAGCTGGGCACAGGGCAGGATGAGGACGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000478232.1
ENST00000649185.1
ENST00000683442.1
CDS CCA 72 bp CTTCACAGCAACCGAGGCCTTGCCGGCCACCACGGTTaGCAAATAACTCAGGCACACGGCCTAGCTGGCCCT +
Preference number: 6 (lower is better)
Translates to: LHSNRGLAGHHG*QITQAHGLAGP
Trigger: AGGGCCAGCTAGGCCGTGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGCAAGGCCTCGGTTGCTGTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429051.1
CDS CAA 72 bp ACTTCACAGCAACCGAGGCCTTGCCGGCCACCACGGTaGGCAAATAACTCAGGCACACGGCCTAGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: TSQQPRPCRPPR*ANNSGTRPSWP
Trigger: GGGCCAGCTAGGCCGTGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGCAAGGCCTCGGTTGCTGTGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000429051.1
CDS CAA 90 bp ACTCATTTAACTTCACAGCAACCGAGGCCTTGCCGGCCACCACGGTaGGCAAATAACTCAGGCACACGGCCTAGCTGGCCCTGTTCCCCG +
Preference number: 6 (lower is better)
Translates to: THLTSQQPRPCRPPR*ANNSGTRPSWPCSP
Trigger: CGGGGAACAGGGCCAGCTAGGCCGTGTGCCTGAGTTATTTGCCAACCGTGGTGGCCGGCAAGGCCTCGGTTGCTGTGAAGTTAAATGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429051.1
CDS CAA 90 bp TCCTTGGAAACTCTGAGATGCGACAATCCCTGCCTCCACACCTCCTaGCCCCATCCAAGCCTCTGGGAAGTGTGGAAGAGGCAGTGCCGG +
Preference number: 6 (lower is better)
Translates to: SLETLRCDNPCLHTS*PHPSLWEVWKRQCR
Trigger: CCGGCACTGCCTCTTCCACACTTCCCAGAGGCTTGGATGGGGCAAGGAGGTGTGGAGGCAGGGATTGTCGCATCTCAGAGTTTCCAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434290.6
CDS GCA 72 bp TGGGTTCAAGGGCATAGTTCGCTAATGACACGGGCCTaGTCTTCTCACTACTGTCCCCCAGCCCCGCAAGAG +
Preference number: 6 (lower is better)
Translates to: WVQGHSSLMTRA*SSHYCPPAPQE
Trigger: CTCTTGCGGGGCTGGGGGACAGTAGTGAGAAGAGCAGGCCCGTGTCATTAGCGAACTATGCCCTTGAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430407.1
ENST00000486790.2
CDS CCA 72 bp TGGGTGACATCTTCCTGTCCAGTAGCGTCCGTCGCCTaGGTTCAAGGGCATAGTTCGCTAATGACACGGGCC +
Preference number: 6 (lower is better)
Translates to: WVTSSCPVASVA*VQGHSSLMTRA
Trigger: GGCCCGTGTCATTAGCGAACTATGCCCTTGAACCCAGGCGACGGACGCTACTGGACAGGAAGATGTCACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430407.1
ENST00000486790.2
CDS GCA 72 bp TTTCCTGAGGCCACCTTTACCACAGGCACATCCAGCTaGACCTGCACAGGCACCATGCTCTTCTTCATGGGC +
Preference number: 6 (lower is better)
Translates to: FPEATFTTGTSS*TCTGTMLFFMG
Trigger: GCCCATGAAGAAGAGCATGGTGCCTGTGCAGGTGCAGCTGGATGTGCCTGTGGTAAAGGTGGCCTCAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000411533.5
ENST00000419074.5
ENST00000427469.5
ENST00000429051.1
ENST00000430407.1
ENST00000434290.6
ENST00000649185.1
ENST00000683442.1
CDS TCA 72 bp GTTCTGAGAGCTGCCCTTCTCAATCTCCTCCCACAGTaGGGCCACCTCCCATCAGGATATGGACATTCTCAC +
Preference number: 6 (lower is better)
Translates to: VLRAALLNLLPQ*GHLPSGYGHSH
Trigger: GTGAGAATGTCCATATCCTGATGGGAGGTGGCCTCACTGTGGGAGGAGATTGAGAAGGGCAGCTCTCAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478232.1
CDS GCA 72 bp CAGCTCTGTTCTTTGTCCTTGACTAATAAGACTGTATaGTGGCCCCCGCTGGACACAGATAAGACCACACGG +
Preference number: 6 (lower is better)
Translates to: QLCSLSLTNKTV*WPPLDTDKTTR
Trigger: CCGTGTGGTCTTATCTGTGTCCAGCGGGGGCCAGCATACAGTCTTATTAGTCAAGGACAAAGAACAGAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
ENST00000683442.1
CDS CCA 72 bp CTCTGTTCTTTGTCCTTGACTAATAAGACTGTATGCTaGCCCCCGCTGGACACAGATAAGACCACACGGTTC +
Preference number: 6 (lower is better)
Translates to: LCSLSLTNKTVC*PPLDTDKTTRF
Trigger: GAACCGTGTGGTCTTATCTGTGTCCAGCGGGGGCCAGCATACAGTCTTATTAGTCAAGGACAAAGAACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000373831.7
ENST00000373832.5
ENST00000373833.10
ENST00000398958.6
ENST00000649185.1
ENST00000683442.1