RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RCAN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000172348

Ensembl transcript IDs: ENST00000306764.11, ENST00000330430.10, ENST00000371374.6, ENST00000405162.2

Found 483 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGTGATCATGCATGTCCTGGGAATGTTGGGATGCAGAGGACTGAGTaGGACCAGATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACA +
Preference number: 1 (lower is better)
Translates to: GDHACPGNVGMQRTE*DQIGISHAVKVKFT
Trigger: TGTAAACTTGACTTTGACTGCATGAGATATCCCTATCTGGTCTCACTCAGTCCTCTGCATCCCAACATTCCCAGGACATGCATGATCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR GCA 90 bp ACACACATCAGGACTGGGACTGAAACAGCTCACAAACAACACAGGTaGTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGAGAA +
Preference number: 1 (lower is better)
Translates to: THIRTGTETAHKQHR*YLLLMSLAWINMRE
Trigger: TTCTCTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR CCA 90 bp TATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTaGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAA +
Preference number: 1 (lower is better)
Translates to: YLMQSKSSLHMVLFK*PGENNAHTSGLGLK
Trigger: TTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR TCA 90 bp GGACACCATTTCTCCACTACTAAGTCTGTAGTCGTTTATCATCAATaGAAAACCAAAAACCTCCACAGCAAAGGAAAGTCAAAGCATATG +
Preference number: 1 (lower is better)
Translates to: GHHFSTTKSVVVYHQ*KTKNLHSKGKSKHM
Trigger: CATATGCTTTGACTTTCCTTTGCTGTGGAGGTTTTTGGTTTTTCATTGATGATAAACGACTACAGACTTAGTAGTGGAGAAATGGTGTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR GCA 90 bp TGTTTGAAATCTATTGAGGAATATCTTTGGGGCCAAGGTCAATTTTaGCTCCAGGAATTTCAACAGAGCTATGGTGTATTGACTCACAAT +
Preference number: 1 (lower is better)
Translates to: CLKSIEEYLWGQGQF*LQEFQQSYGVLTHN
Trigger: ATTGTGAGTCAATACACCATAGCTCTGTTGAAATTCCTGGAGGCAAAATTGACCTTGGCCCCAAAGATATTCCTCAATAGATTTCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGTGGGATGCAGAGGACTaGGTGAGACCAGATAGGGAT +
Preference number: 2 (lower is better)
Translates to: SITLDKPPQRGWESSTGEWDAED*VRPDRD
Trigger: ATCCCTATCTGGTCTCACTCAGTCCTCTGCATCCCA...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGGATGCTGACAATCTGTaGGTTATAAGATATCCTCAA +
Preference number: 2 (lower is better)
Translates to: SITLDKPPQRGWESSTGEDADNL*VIRYPQ
Trigger: TTGAGGATATCTTATAACTCACAGATTGTCAGCATC...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCACACGGGTGTCGCGTaGGTAGGACCGGCATACATG +
Preference number: 2 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCHTGVA*VGPAYM
Trigger: CATGTATGCCGGTCCTACTCACGCGACACCCGTGTG...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp TGCTCAGCTGCTGCTGCATTCTGGGGATTTAGCTTCATCCCAATAATCTACAACTGGGATGCAGAGGACTaGGTGAGACCAGATAGGGAT +
Preference number: 2 (lower is better)
Translates to: CSAAAAFWGFSFIPIIYNWDAED*VRPDRD
Trigger: ATCCCTATCTGGTCTCACTCAGTCCTCTGCATCCCA...GTTGTAGATTATTGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGCTGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCGCAGTGCTCTGCATCTaGATAGCGGAGCCTACTATT +
Preference number: 2 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPAVLCI*IAEPTI
Trigger: AATAGTAGGCTCCGCTATTCAGATGCAGAGCACTGC...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR TCA 90 bp TGGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAACAGCTCACATTAATGGGTATGATATaGTCAGGAGACATATCACCT +
Preference number: 2 (lower is better)
Translates to: WPGENNAHTSGLGLKQLTLMGMI*SGDISP
Trigger: AGGTGATATGTCTCCTGATCATATCATACCCATTAA...TGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTCACACGGGTGTCGCGTaGGTAGGACCGGCATACATG +
Preference number: 2 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGHTGVA*VGPAYM
Trigger: CATGTATGCCGGTCCTACTCACGCGACACCCGTGTG...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR GCA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCGCTAGGAGGTTCCCTTaGAACACTTCAAGGAGTCTT +
Preference number: 2 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPARRFP*NTSRSL
Trigger: AAGACTCCTTGAAGTGTTGCAAGGGAACCTCCTAGC...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR CCA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACGCTGCTGCTGCATTCTaGGGATTTAGCTTCATCCCA +
Preference number: 2 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYAAAAF*GFSFIP
Trigger: TGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGC...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp AATGTGCGTCATGGAAATGCTGAGGCGATTCTGACTTTCACAGTGCTAGGAGGTTGGCTTGGATCAACATaGGAGAACAAAGATATAGGC +
Preference number: 2 (lower is better)
Translates to: NVRHGNAEAILTFTVLGGWLGST*ENKDIG
Trigger: GCCTATATCTTTGTTCTCTCATGTTGATCCAAGCCA...ACCTCCTAGCACTGTGAAAGTCAGAATCGCCTCAGCATTTCCATGACGCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR TCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAATGTACAGGAGTAGATaGGGCCTGGCACACATAGCA +
Preference number: 2 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPMYRSR*GLAHIA
Trigger: TGCTATGTGTGCCAGGCCTCATCTACTCCTGTACAT...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR GCA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCTTTAACATGCTCAGCTaGTGCTGCATTCTGGGGATT +
Preference number: 2 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPFNMLS*CCILGI
Trigger: AATCCCCAGAATGCAGCAGCAGCTGAGCATGTTAAA...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR CCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGGCTGCTGCTGCATTCTaGGGATTTAGCTTCATCCCA +
Preference number: 2 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQAAAAF*GFSFIP
Trigger: TGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGC...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCATCAGGACTGGGACTaGAACAGCTCACAAACAACA +
Preference number: 2 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPHQDWD*NSSQTT
Trigger: TGTTGTTTGTGAGCTGTTTCAGTCCCAGTCCTGATG...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR TCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACCATCAGGACTGGGACTaGAACAGCTCACAAACAACA +
Preference number: 2 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHHQDWD*NSSQTT
Trigger: TGTTGTTTGTGAGCTGTTTCAGTCCCAGTCCTGATG...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCACATCAGGACTGGGACTaGAACAGCTCACAAACAACA +
Preference number: 2 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPHQDWD*NSSQTT
Trigger: TGTTGTTTGTGAGCTGTTTCAGTCCCAGTCCTGATG...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTATGCAGAGGACTGAGTaGGACCAGATAGGGATATCT +
Preference number: 2 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCMQRTE*DQIGIS
Trigger: AGATATCCCTATCTGGTCTCACTCAGTCCTCTGCAT...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp TGCTCAGCTGCTGCTGCATTCTGGGGATTTAGCTTCATCCCAATAATCTACAACCAGGGGAGTGGTGTTTaGAATCTATTGAGGAATATC +
Preference number: 2 (lower is better)
Translates to: CSAAAAFWGFSFIPIIYNQGSGV*NLLRNI
Trigger: GATATTCCTCAATAGATTTCAAACACCACTCCCCTG...GTTGTAGATTATTGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGCTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR GCA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACGGCCAAGGTCAATTTTaGCTCCAGGAATTTCAACAG +
Preference number: 2 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYGQGQF*LQEFQQ
Trigger: CTGTTGAAATTCCTGGAGGCAAAATTGACCTTGGCC...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR GCA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCGAGATTTGCATAATGTaGGTCATGGAAATGCTGAGG +
Preference number: 2 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPEICIM*VMEMLR
Trigger: CCTCAGCATTTCCATGACGCACATTATGCAAATCTC...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR CCA 90 bp AATGTGCGTCATGGAAATGCTGAGGCGATTCTGACTTTCACAGTGCTAGGAGGTTGTTTTTCTGAGGCTTaGGTAATGAAAGTACTTCCC +
Preference number: 2 (lower is better)
Translates to: NVRHGNAEAILTFTVLGGCFSEA*VMKVLP
Trigger: GGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA...ACCTCCTAGCACTGTGAAAGTCAGAATCGCCTCAGCATTTCCATGACGCACATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR TCA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCGGTGCTATTTGTTACTaGTGTCTCTGGCTTGGATCA +
Preference number: 2 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICGAICY*CLWLGS
Trigger: TGATCCAAGCCAGAGACATCAGTAACAAATAGCACC...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGGGTGCTATTTGTTACTaGTGTCTCTGGCTTGGATCA +
Preference number: 2 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQGAICY*CLWLGS
Trigger: TGATCCAAGCCAGAGACATCAGTAACAAATAGCACC...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTTGGGATGCAGAGGACTaGGTGAGACCAGATAGGGAT +
Preference number: 2 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGWDAED*VRPDRD
Trigger: ATCCCTATCTGGTCTCACTCAGTCCTCTGCATCCCA...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR TCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGACATGGCTGGATGCTaGCAATCTGTGAGTTATAAG +
Preference number: 2 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPDMAGC*QSVSYK
Trigger: CTTATAACTCACAGATTGTCAGCATCCAGCCATGTC...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCGACATGGCTGGATGCTaGCAATCTGTGAGTTATAAG +
Preference number: 2 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICDMAGC*QSVSYK
Trigger: CTTATAACTCACAGATTGTCAGCATCCAGCCATGTC...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCGACATGGCTGGATGCTaGCAATCTGTGAGTTATAAG +
Preference number: 2 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPDMAGC*QSVSYK
Trigger: CTTATAACTCACAGATTGTCAGCATCCAGCCATGTC...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR TCA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTGACATGGCTGGATGCTaGCAATCTGTGAGTTATAAG +
Preference number: 2 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCDMAGC*QSVSYK
Trigger: CTTATAACTCACAGATTGTCAGCATCCAGCCATGTC...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR GCA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCGGCCAAGGTCAATTTTaGCTCCAGGAATTTCAACAG +
Preference number: 2 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPGQGQF*LQEFQQ
Trigger: CTGTTGAAATTCCTGGAGGCAAAATTGACCTTGGCC...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR GCA 90 bp AATGTGCGTCATGGAAATGCTGAGGCGATTCTGACTTTCACAGTGCTAGGAGGTATCCCTCAATCTGTTTaGTGTGTTATTGTTCTTGTG +
Preference number: 2 (lower is better)
Translates to: NVRHGNAEAILTFTVLGGIPQSV*CVIVLV
Trigger: CACAAGAACAATAACACAGCAAACAGATTGAGGGAT...ACCTCCTAGCACTGTGAAAGTCAGAATCGCCTCAGCATTTCCATGACGCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR CCA 90 bp AATGTGCGTCATGGAAATGCTGAGGCGATTCTGACTTTCACAGTGCTAGGAGGTCCAGACTTGTTGAGCTaGAATATTCTGATCATTTTC +
Preference number: 2 (lower is better)
Translates to: NVRHGNAEAILTFTVLGGPDLLS*NILIIF
Trigger: GAAAATGATCAGAATATTCCAGCTCAACAAGTCTGG...ACCTCCTAGCACTGTGAAAGTCAGAATCGCCTCAGCATTTCCATGACGCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR CCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCGCTGCTGCTGCATTCTaGGGATTTAGCTTCATCCCA +
Preference number: 2 (lower is better)
Translates to: IFLMETQDFTSNALLSFTAAAAF*GFSFIP
Trigger: TGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGC...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTGGCTTGGATCAACATaGGAGAACAAAGATATAGGC +
Preference number: 2 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQWLGST*ENKDIG
Trigger: GCCTATATCTTTGTTCTCTCATGTTGATCCAAGCCA...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCCATCAGGACTGGGACTaGAACAGCTCACAAACAACA +
Preference number: 2 (lower is better)
Translates to: IFLMETQDFTSNALLSFTHQDWD*NSSQTT
Trigger: TGTTGTTTGTGAGCTGTTTCAGTCCCAGTCCTGATG...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGATGCAGAGGACTGAGTaGGACCAGATAGGGATATCT +
Preference number: 2 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKRMQRTE*DQIGIS
Trigger: AGATATCCCTATCTGGTCTCACTCAGTCCTCTGCAT...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCCAGGGGAGTGGTGTTTaGAATCTATTGAGGAATATC +
Preference number: 2 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICQGSGV*NLLRNI
Trigger: GATATTCCTCAATAGATTTCAAACACCACTCCCCTG...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCAGGGGAGTGGTGTTTaGAATCTATTGAGGAATATC +
Preference number: 2 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPQGSGV*NLLRNI
Trigger: GATATTCCTCAATAGATTTCAAACACCACTCCCCTG...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR TCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGCAGGGGAGTGGTGTTTaGAATCTATTGAGGAATATC +
Preference number: 2 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQQGSGV*NLLRNI
Trigger: GATATTCCTCAATAGATTTCAAACACCACTCCCCTG...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp TGCTCAGCTGCTGCTGCATTCTGGGGATTTAGCTTCATCCCAATAATCTACAACATAAATAGGTTTGTCTaGAATCAGTCTCTATCACCC +
Preference number: 2 (lower is better)
Translates to: CSAAAAFWGFSFIPIIYNINRFV*NQSLSP
Trigger: GGGTGATAGAGACTGATTTCAGACAAACCTATTTAT...GTTGTAGATTATTGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGCTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR GCA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCGATAGGGATATCTCATaGAGTCAAAGTCAAGTTTAC +
Preference number: 2 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPDRDIS*SQSQVY
Trigger: GTAAACTTGACTTTGACTGCATGAGATATCCCTATC...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR GCA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCGAAAGTCAAAGCATATaGTTATTGTACACTCCTCAG +
Preference number: 2 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPESQSI*LLYTPQ
Trigger: CTGAGGAGTGTACAATAAGCATATGCTTTGACTTTC...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR CCA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCAGTCAAGTTTACATATaGTCCTATTTAAGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPSQVYI*SYLSGQ
Trigger: CTGGCCACTTAAATAGGACCATATGTAAACTTGACT...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR CCA 90 bp TGCTCAGCTGCTGCTGCATTCTGGGGATTTAGCTTCATCCCAATAATCTACAACCCAGACTTGTTGAGCTaGAATATTCTGATCATTTTC +
Preference number: 2 (lower is better)
Translates to: CSAAAAFWGFSFIPIIYNPDLLS*NILIIF
Trigger: GAAAATGATCAGAATATTCCAGCTCAACAAGTCTGG...GTTGTAGATTATTGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGCTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CCA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACATTGAGGAATATCTTTaGGGCCAAGGTCAATTTTGC +
Preference number: 2 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYIEEYL*GQGQFC
Trigger: GCAAAATTGACCTTGGCCCCAAAGATATTCCTCAAT...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CCA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTGTTTTTCTGAGGCTTaGGTAATGAAAGTACTTCCC +
Preference number: 2 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYCFSEA*VMKVLP
Trigger: GGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTTAATGGGTATGATATaGTCAGGAGACATATCACCT +
Preference number: 2 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYLMGMI*SGDISP
Trigger: AGGTGATATGTCTCCTGATCATATCATACCCATTAA...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTATGCAGAGGACTGAGTaGGACCAGATAGGGATATCT +
Preference number: 2 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGMQRTE*DQIGIS
Trigger: AGATATCCCTATCTGGTCTCACTCAGTCCTCTGCAT...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR TCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTATGTACAGGAGTAGATaGGGCCTGGCACACATAGCA +
Preference number: 2 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFMYRSR*GLAHIA
Trigger: TGCTATGTGTGCCAGGCCTCATCTACTCCTGTACAT...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCTCTTGTGTGTTTTTCTaGGGCTTGGGTAATGAAAGT +
Preference number: 2 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPSCVFF*GLGNES
Trigger: ACTTTCATTACCCAAGCCTCAGAAAAACACACAAGA...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR TCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTCTTGTGTGTTTTTCTaGGGCTTGGGTAATGAAAGT +
Preference number: 2 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQSCVFF*GLGNES
Trigger: ACTTTCATTACCCAAGCCTCAGAAAAACACACAAGA...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGAGTTCTACAGGGGAGTaGTGTTTGAAATCTATTGAG +
Preference number: 2 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQSSTGE*CLKSIE
Trigger: CTCAATAGATTTCAAACACCACTCCCCTGTAGAACT...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACAGTTCTACAGGGGAGTaGTGTTTGAAATCTATTGAG +
Preference number: 2 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHSSTGE*CLKSIE
Trigger: CTCAATAGATTTCAAACACCACTCCCCTGTAGAACT...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTGCTGCTGCTGCATTCTaGGGATTTAGCTTCATCCCA +
Preference number: 2 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFAAAAF*GFSFIP
Trigger: TGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGC...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTGTTTTTCTGAGGCTTaGGTAATGAAAGTACTTCCC +
Preference number: 2 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQCFSEA*VMKVLP
Trigger: GGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCTTAATGGGTATGATATaGTCAGGAGACATATCACCT +
Preference number: 2 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICLMGMI*SGDISP
Trigger: AGGTGATATGTCTCCTGATCATATCATACCCATTAA...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCGATGCTGACAATCTGTaGGTTATAAGATATCCTCAA +
Preference number: 2 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPDADNL*VIRYPQ
Trigger: TTGAGGATATCTTATAACTCACAGATTGTCAGCATC...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR TCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACGATGCTGACAATCTGTaGGTTATAAGATATCCTCAA +
Preference number: 2 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHDADNL*VIRYPQ
Trigger: TTGAGGATATCTTATAACTCACAGATTGTCAGCATC...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR GCA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCCACAAACAACACAGGTaGTATTTGTTACTGATGTCT +
Preference number: 2 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICHKQHR*YLLLMS
Trigger: AGACATCAGTAACAAATAGCACCTGTGTTGTTTGTG...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR GCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGCACAAACAACACAGGTaGTATTTGTTACTGATGTCT +
Preference number: 2 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQHKQHR*YLLLMS
Trigger: AGACATCAGTAACAAATAGCACCTGTGTTGTTTGTG...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR GCA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTATCCCTCAATCTGTTTaGTGTGTTATTGTTCTTGTG +
Preference number: 2 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCIPQSV*CVIVLV
Trigger: CACAAGAACAATAACACAGCAAACAGATTGAGGGAT...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAAGTCAAGTTTACATATaGTCCTATTTAAGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPSQVYI*SYLSGQ
Trigger: CTGGCCACTTAAATAGGACCATATGTAAACTTGACT...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACAGTCAAGTTTACATATaGTCCTATTTAAGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHSQVYI*SYLSGQ
Trigger: CTGGCCACTTAAATAGGACCATATGTAAACTTGACT...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAATCTAGATAGGACATaGCTGGATGCTGACAATCTG +
Preference number: 2 (lower is better)
Translates to: IFLMETQDFTSNALLSFTNLDRT*LDADNL
Trigger: CAGATTGTCAGCATCCAGCCATGTCCTATCTAGATT...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGAAAATAAATGCTGGTaGTCATGCATGTCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGENKCW*SCMSWE
Trigger: TTCCCAGGACATGCATGATCACCAGCATTTATTTTC...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR GCA 90 bp TGGTGTTTGAAATCTATTGAGGAATATCTTTGGGGCCAAGGTCAATTTTGCCTCGATAGGGATATCTCATaGAGTCAAAGTCAAGTTTAC +
Preference number: 2 (lower is better)
Translates to: WCLKSIEEYLWGQGQFCLDRDIS*SQSQVY
Trigger: GTAAACTTGACTTTGACTGCATGAGATATCCCTATC...GAGGCAAAATTGACCTTGGCCCCAAAGATATTCCTCAATAGATTTCAAACACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CCA 90 bp TGGTGTTTGAAATCTATTGAGGAATATCTTTGGGGCCAAGGTCAATTTTGCCTCAGTCAAGTTTACATATaGTCCTATTTAAGTGGCCAG +
Preference number: 2 (lower is better)
Translates to: WCLKSIEEYLWGQGQFCLSQVYI*SYLSGQ
Trigger: CTGGCCACTTAAATAGGACCATATGTAAACTTGACT...GAGGCAAAATTGACCTTGGCCCCAAAGATATTCCTCAATAGATTTCAAACACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CCA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGAGTTCTACAGGGGAGTaGTGTTTGAAATCTATTGAG +
Preference number: 2 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKRSSTGE*CLKSIE
Trigger: CTCAATAGATTTCAAACACCACTCCCCTGTAGAACT...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCATAAATAGGTTTGTCTaGAATCAGTCTCTATCACCC +
Preference number: 2 (lower is better)
Translates to: IFLMETQDFTSNALLSFTINRFV*NQSLSP
Trigger: GGGTGATAGAGACTGATTTCAGACAAACCTATTTAT...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR TCA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGATAAATAGGTTTGTCTaGAATCAGTCTCTATCACCC +
Preference number: 2 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKRINRFV*NQSLSP
Trigger: GGGTGATAGAGACTGATTTCAGACAAACCTATTTAT...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCCCAGACTTGTTGAGCTaGAATATTCTGATCATTTTC +
Preference number: 2 (lower is better)
Translates to: IFLMETQDFTSNALLSFTPDLLS*NILIIF
Trigger: GAAAATGATCAGAATATTCCAGCTCAACAAGTCTGG...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR GCA 90 bp GATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTCACAAACAACACAGGTaGTATTTGTTACTGATGTCT +
Preference number: 2 (lower is better)
Translates to: DRDISCSQSQVYIWSYLSHKQHR*YLLLMS
Trigger: AGACATCAGTAACAAATAGCACCTGTGTTGTTTGTG...ACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATATCCCTATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR GCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTATCCCTCAATCTGTTTaGTGTGTTATTGTTCTTGTG +
Preference number: 2 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFIPQSV*CVIVLV
Trigger: CACAAGAACAATAACACAGCAAACAGATTGAGGGAT...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR CCA 72 bp GTCTCTATCACCCTGGACAAGCCTCCCCAACGAGGCTaGGAGAGTTCTACAGGGGAGTGGTGTTTGAAATCT +
Preference number: 3 (lower is better)
Translates to: VSITLDKPPQRG*ESSTGEWCLKS
Trigger: AGATTTCAAACACCACTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR TCA 72 bp GCATGTCCTGGGAATGTTGGGATGCAGAGGACTGAGTaGGACCAGATAGGGATATCTCATGCAGTCAAAGTC +
Preference number: 3 (lower is better)
Translates to: ACPGNVGMQRTE*DQIGISHAVKV
Trigger: GACTTTGACTGCATGAGATATCCCTATCTGGTCTCACTCAGTCCTCTGCATCCCAACATTCCCAGGACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR TCA 72 bp AACGAGGCTGGGAGAGTTCTACAGGGGAGTGGTGTTTaGAATCTATTGAGGAATATCTTTGGGGCCAAGGTC +
Preference number: 3 (lower is better)
Translates to: NEAGRVLQGSGV*NLLRNIFGAKV
Trigger: GACCTTGGCCCCAAAGATATTCCTCAATAGATTTCAAACACCACTCCCCTGTAGAACTCTCCCAGCCTCGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACCATGTCCTGGGAATGTaGGGATGCAGAGGACTGAGT +
Preference number: 3 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYHVLGM*GCRGLS
Trigger: ACTCAGTCCTCTGCATCCCAACATTCCCAGGACATG...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp AATGTGCGTCATGGAAATGCTGAGGCGATTCTGACTTTCACAGTGCTAGGAGGTACTGATGTCTCTGGCTaGGATCAACATGAGAGAACA +
Preference number: 3 (lower is better)
Translates to: NVRHGNAEAILTFTVLGGTDVSG*DQHERT
Trigger: TGTTCTCTCATGTTGATCCAAGCCAGAGACATCAGT...ACCTCCTAGCACTGTGAAAGTCAGAATCGCCTCAGCATTTCCATGACGCACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR CAA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCATGTCCTGGGAATGTaGGGATGCAGAGGACTGAGT +
Preference number: 3 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCHVLGM*GCRGLS
Trigger: ACTCAGTCCTCTGCATCCCAACATTCCCAGGACATG...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGCATGTCCTGGGAATGTaGGGATGCAGAGGACTGAGT +
Preference number: 3 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQHVLGM*GCRGLS
Trigger: ACTCAGTCCTCTGCATCCCAACATTCCCAGGACATG...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR GCA 72 bp AGGACTGGGACTGAAACAGCTCACAAACAACACAGGTaGTATTTGTTACTGATGTCTCTGGCTTGGATCAAC +
Preference number: 3 (lower is better)
Translates to: RTGTETAHKQHR*YLLLMSLAWIN
Trigger: GTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTGTGAGCTGTTTCAGTCCCAGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCGGGCCAAGGTCAATTTaGCCTCCAGGAATTTCAACA +
Preference number: 3 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPGPRSI*PPGIST
Trigger: TGTTGAAATTCCTGGAGGCAAAATTGACCTTGGCCC...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR CAA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCGGGCCAAGGTCAATTTaGCCTCCAGGAATTTCAACA +
Preference number: 3 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICGPRSI*PPGIST
Trigger: TGTTGAAATTCCTGGAGGCAAAATTGACCTTGGCCC...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAACTGATGTCTCTGGCTaGGATCAACATGAGAGAACA +
Preference number: 3 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPTDVSG*DQHERT
Trigger: TGTTCTCTCATGTTGATCCAAGCCAGAGACATCAGT...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCAACACAGGTGCTATTaGTTACTGATGTCTCTGGCT +
Preference number: 3 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPQHRCY*LLMSLA
Trigger: AGCCAGAGACATCAGTAACAAATAGCACCTGTGTTG...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR CAA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGTTTTGTCCGAGAGGCTaGATAACAAGGAAGGAATCT +
Preference number: 3 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHEFCPRG*ITRKES
Trigger: AGATTCCTTCCTTGTTATCAAGCCTCTCGGACAAAA...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTTTTGTCCGAGAGGCTaGATAACAAGGAAGGAATCT +
Preference number: 3 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQFCPRG*ITRKES
Trigger: AGATTCCTTCCTTGTTATCAAGCCTCTCGGACAAAA...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACATATACCCAGACTTGTaGAGCTGGAATATTCTGATC +
Preference number: 3 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYIYPDL*SWNILI
Trigger: GATCAGAATATTCCAGCTCAACAAGTCTGGGTATAT...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCGGGCCAAGGTCAATTTaGCCTCCAGGAATTTCAACA +
Preference number: 3 (lower is better)
Translates to: IFLMETQDFTSNALLSFTGPRSI*PPGIST
Trigger: TGTTGAAATTCCTGGAGGCAAAATTGACCTTGGCCC...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR GCA 72 bp TCTATTGAGGAATATCTTTGGGGCCAAGGTCAATTTTaGCTCCAGGAATTTCAACAGAGCTATGGTGTATTG +
Preference number: 3 (lower is better)
Translates to: SIEEYLWGQGQF*LQEFQQSYGVL
Trigger: CAATACACCATAGCTCTGTTGAAATTCCTGGAGGCAAAATTGACCTTGGCCCCAAAGATATTCCTCAATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR GCA 72 bp CATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATaGTCTCCTCAGTTTCACCAGTACTGTGTCCAGTAC +
Preference number: 3 (lower is better)
Translates to: HFPYGNSGFYKQ*SPQFHQYCVQY
Trigger: GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTCTTTTCCTAGCCCTTTaGTCCGAGAGGCTTGATAAC +
Preference number: 3 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGLFLAL*SERLDN
Trigger: GTTATCAAGCCTCTCGGACAAAAGGGCTAGGAAAAG...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR CAA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCCAACACAGGTGCTATTaGTTACTGATGTCTCTGGCT +
Preference number: 3 (lower is better)
Translates to: IFLMETQDFTSNALLSFTQHRCY*LLMSLA
Trigger: AGCCAGAGACATCAGTAACAAATAGCACCTGTGTTG...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGCAACACAGGTGCTATTaGTTACTGATGTCTCTGGCT +
Preference number: 3 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKRQHRCY*LLMSLA
Trigger: AGCCAGAGACATCAGTAACAAATAGCACCTGTGTTG...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAATATACCCAGACTTGTaGAGCTGGAATATTCTGATC +
Preference number: 3 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPIYPDL*SWNILI
Trigger: GATCAGAATATTCCAGCTCAACAAGTCTGGGTATAT...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACATATACCCAGACTTGTaGAGCTGGAATATTCTGATC +
Preference number: 3 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHIYPDL*SWNILI
Trigger: GATCAGAATATTCCAGCTCAACAAGTCTGGGTATAT...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGCTGTGTTATTGTTCTaGTGTGTTTTTCTGAGGCTT +
Preference number: 3 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPAVLLF*CVFLRL
Trigger: AAGCCTCAGAAAAACACACAAGAACAATAACACAGC...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTACTGATGTCTCTGGCTaGGATCAACATGAGAGAACA +
Preference number: 3 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGTDVSG*DQHERT
Trigger: TGTTCTCTCATGTTGATCCAAGCCAGAGACATCAGT...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR CAA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTCAACACAGGTGCTATTaGTTACTGATGTCTCTGGCT +
Preference number: 3 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGQHRCY*LLMSLA
Trigger: AGCCAGAGACATCAGTAACAAATAGCACCTGTGTTG...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR CAA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTGGGCCAAGGTCAATTTaGCCTCCAGGAATTTCAACA +
Preference number: 3 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFGPRSI*PPGIST
Trigger: TGTTGAAATTCCTGGAGGCAAAATTGACCTTGGCCC...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGAAACAAATAACTTTTTaGAGCACACGGGTGTCGCGT +
Preference number: 3 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKRKQITF*STRVSR
Trigger: ACGCGACACCCGTGTGCTCAAAAAAGTTATTTGTTT...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCAATCCCTCAATCTGTTaGCTGTGTTATTGTTCTTGT +
Preference number: 3 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPNPSIC*LCYCSC
Trigger: ACAAGAACAATAACACAGCAAACAGATTGAGGGATT...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
3UTR-3UTR CAA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTAATCCCTCAATCTGTTaGCTGTGTTATTGTTCTTGT +
Preference number: 3 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCNPSIC*LCYCSC
Trigger: ACAAGAACAATAACACAGCAAACAGATTGAGGGATT...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp GATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTTTTTGTCCGAGAGGCTaGATAACAAGGAAGGAATCT +
Preference number: 3 (lower is better)
Translates to: DRDISCSQSQVYIWSYLSFCPRG*ITRKES
Trigger: AGATTCCTTCCTTGTTATCAAGCCTCTCGGACAAAA...ACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATATCCCTATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTTTTTGTCCGAGAGGCTaGATAACAAGGAAGGAATCT +
Preference number: 3 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFFCPRG*ITRKES
Trigger: AGATTCCTTCCTTGTTATCAAGCCTCTCGGACAAAA...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
3UTR-3UTR CAA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAATCCCTCAATCTGTTaGCTGTGTTATTGTTCTTGT +
Preference number: 3 (lower is better)
Translates to: IFLMETQDFTSNALLSFTNPSIC*LCYCSC
Trigger: ACAAGAACAATAACACAGCAAACAGATTGAGGGATT...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGCCGACTCTGGCTAACTaGGGAAATGTCGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SITLDKPPQRGWESSTGEPTLAN*GNVGEP
Trigger: GGGCTCCCCGACATTTCCTCAGTTAGCCAGAGTCGG...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306764.11
CDS-3UTR TCA 90 bp TGGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAACAGCTCACACACACGGGTGTCGCGTaGGTAGGACCGGCATACATG +
Preference number: 4 (lower is better)
Translates to: WPGENNAHTSGLGLKQLTHTGVA*VGPAYM
Trigger: CATGTATGCCGGTCCTACTCACGCGACACCCGTGTG...TGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp TGGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAACAGCTCACAGCATCGTTGATGGGCTaGCAGCCAACAGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: WPGENNAHTSGLGLKQLTASLMG*QPTGGE
Trigger: CTCCCCACCTGTTGGCTGGCAGCCCATCAACGATGC...TGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGGTCATAGTTGAGGACTaGCGTGGCATCGTTGATGGG +
Preference number: 4 (lower is better)
Translates to: SITLDKPPQRGWESSTGEVIVED*RGIVDG
Trigger: CCCATCAACGATGCCACGCCAGTCCTCAACTATGAC...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGGACGCCGAGTTTGGATaGTTTTTGGCTTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SITLDKPPQRGWESSTGEDAEFG*FLALGK
Trigger: CTTCCCCAAAGCCAAAAATCATCCAAACTCGGCGTC...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGATGTACAGGAGTAGATaGGGCCTGGCACACATAGCA +
Preference number: 4 (lower is better)
Translates to: SITLDKPPQRGWESSTGEMYRSR*GLAHIA
Trigger: TGCTATGTGTGCCAGGCCTCATCTACTCCTGTACAT...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACGTCCTCCCGGGCTTCTaGGCTTGGTGGGCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYVLPGF*AWWALA
Trigger: CGCCAGCGCCCACCAAGCGCAGAAGCCCGGGAGGAC...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306764.11
CDS-3UTR CCA 90 bp TGGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAACAGCTCACAGTGTCCCTGCTGCCCTaGGCTCCTCATTCCGATGAA +
Preference number: 4 (lower is better)
Translates to: WPGENNAHTSGLGLKQLTVSLLP*APHSDE
Trigger: TTCATCGGAATGAGGAGCCCAGGGCAGCAGGGACAC...TGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR CCA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGGACTCAGTCCCTGCATaGAGCTCATACTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SITLDKPPQRGWESSTGEDSVPA*SSYFSP
Trigger: AGGAGAGAAGTATGAGCTCCATGCAGGGACTGAGTC...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGCACAGGCAACCAGAGTaGAAACATCACAGTCCATGC +
Preference number: 4 (lower is better)
Translates to: SITLDKPPQRGWESSTGEHRQPE*KHHSPC
Trigger: GCATGGACTGTGATGTTTCCACTCTGGTTGCCTGTG...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR GCA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTGGAGCCCGCTCCCACTaGACGCAGCCCTCCGCGTCT +
Preference number: 4 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCGARSH*TQPSAS
Trigger: AGACGCGGAGGGCTGCGTGCAGTGGGAGCGGGCTCC...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR CCA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTGCTCTGGGGACGGCTaGAGGCTCGGGCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYCSGDG*RLGLLE
Trigger: CTCCAGGAGCCCGAGCCTCCAGCCGTCCCCAGAGCA...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR TCA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCCTGGCGTGGCATCGTTaGTGGGCTGCCAGCCAACAG +
Preference number: 4 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPLAWHR*WAASQQ
Trigger: CTGTTGGCTGGCAGCCCATCAACGATGCCACGCCAG...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR TCA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGGGTGCTATTTGTTACTaGTGTCTCTGGCTTGGATCA +
Preference number: 4 (lower is better)
Translates to: SITLDKPPQRGWESSTGEGAICY*CLWLGS
Trigger: TGATCCAAGCCAGAGACATCAGTAACAAATAGCACC...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TGGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAACAGCTCACATGGGATGCAGAGGACTaGGTGAGACCAGATAGGGAT +
Preference number: 4 (lower is better)
Translates to: WPGENNAHTSGLGLKQLTWDAED*VRPDRD
Trigger: ATCCCTATCTGGTCTCACTCAGTCCTCTGCATCCCA...TGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp AATGTGCGTCATGGAAATGCTGAGGCGATTCTGACTTTCACAGTGCTAGGAGGTCACACGGGTGTCGCGTaGGTAGGACCGGCATACATG +
Preference number: 4 (lower is better)
Translates to: NVRHGNAEAILTFTVLGGHTGVA*VGPAYM
Trigger: CATGTATGCCGGTCCTACTCACGCGACACCCGTGTG...ACCTCCTAGCACTGTGAAAGTCAGAATCGCCTCAGCATTTCCATGACGCACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp TGGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAACAGCTCACATGGGGTGGAGCCAAGTaGAGTTTGTCTCCATCTGTC +
Preference number: 4 (lower is better)
Translates to: WPGENNAHTSGLGLKQLTWGGAK*SLSPSV
Trigger: GACAGATGGAGACAAACTGCACTTGGCTCCACCCCA...TGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGGCCAGGCCTCGGTGCTaGCTTGCTCTGGGGACGGCT +
Preference number: 4 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQARPRC*LALGTA
Trigger: AGCCGTCCCCAGAGCAAGGCAGCACCGAGGCCTGGC...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR GCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGGTGGCCAGGCCTCGGTaGTGCCTTGCTCTGGGGACG +
Preference number: 4 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQVARPR*CLALGT
Trigger: CGTCCCCAGAGCAAGGCAGCACCGAGGCCTGGCCAC...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR GCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCCGCTGCCTGCTCACCTaGCCGCCGGTGCGAGCGCGT +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTRCLLT*PPVRAR
Trigger: ACGCGCTCGCACCGGCGGGCAGGTGAGCAGGCAGCG...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371374.6
CDS-3UTR CCA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACATGTCGGGGAGCCCCTaGATGGTCCTCCCGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYMSGSP*MVLPGF
Trigger: GAAGCCCGGGAGGACCATCCAGGGGCTCCCCGACAT...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306764.11
CDS-3UTR CCA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACGTTGGACACGGAGGGTaGCAGGCCAGGACGCCGAGT +
Preference number: 4 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYVGHGG*QARTPS
Trigger: ACTCGGCGTCCTGGCCTGCCACCCTCCGTGTCCAAC...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TGGTGTTTGAAATCTATTGAGGAATATCTTTGGGGCCAAGGTCAATTTTGCCTCGGAGGCTCGGGCTCCTaGAGCCCGCTCCCACTGCAC +
Preference number: 4 (lower is better)
Translates to: WCLKSIEEYLWGQGQFCLGGSGS*SPLPLH
Trigger: GTGCAGTGGGAGCGGGCTCCAGGAGCCCGAGCCTCC...GAGGCAAAATTGACCTTGGCCCCAAAGATATTCCTCAATAGATTTCAAACACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR CCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGCCGCCGTGGGTCAGTaGGATTCTGCCTGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPAAVGQ*DSACCP
Trigger: CGGGCAGCAGGCAGAATCCCACTGACCCACGGCGGC...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371374.6
CDS-3UTR CCA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTTCCCCTCATTCCTGCTaGGCGTCCGCGATGCGCCGG +
Preference number: 4 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCSPHSC*ASAMRR
Trigger: CCGGCGCATCGCGGACGCCCAGCAGGAATGAGGGGA...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371374.6
CDS-3UTR TCA 90 bp TGGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAACAGCTCACAGGCTCCTCATTCCGATaGAGTATGATTCTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: WPGENNAHTSGLGLKQLTGSSFR*SMILPS
Trigger: TGAGGGGAGAATCATACTTCATCGGAATGAGGAGCC...TGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR TCA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACCTGGCGTGGCATCGTTaGTGGGCTGCCAGCCAACAG +
Preference number: 4 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYLAWHR*WAASQQ
Trigger: CTGTTGGCTGGCAGCCCATCAACGATGCCACGCCAG...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TGCTCAGCTGCTGCTGCATTCTGGGGATTTAGCTTCATCCCAATAATCTACAACCACACGGGTGTCGCGTaGGTAGGACCGGCATACATG +
Preference number: 4 (lower is better)
Translates to: CSAAAAFWGFSFIPIIYNHTGVA*VGPAYM
Trigger: CATGTATGCCGGTCCTACTCACGCGACACCCGTGTG...GTTGTAGATTATTGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGCTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TGGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAACAGCTCACAGAGAAGAGTCAGCTTTaGAAGGCTGGATGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: WPGENNAHTSGLGLKQLTEKSQL*KAGCCS
Trigger: ACTGCAGCATCCAGCCTTTCAAAGCTGACTCTTCTC...TGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCGCATCGTTGATGGGCTaGCAGCCAACAGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPASLMG*QPTGGE
Trigger: CTCCCCACCTGTTGGCTGGCAGCCCATCAACGATGC...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCAGTGGGATTCTGCCTaGTGCCCGCTCCTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPQWDSA*CPLLPA
Trigger: TGCGGGGAGGAGCGGGCAGCAGGCAGAATCCCACTG...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371374.6
CDS-3UTR GCA 90 bp AGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGGCCAGGAGAGAACAACGCCGCCTCCCTCTCTCTaGCGCCGTGGGTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: SQSQVYIWSYLSGQERTTPPPSL*RRGSVG
Trigger: TCCCACTGACCCACGGCGGCAGAGAGAGGGAGGCGG...CGTTGTTCTCTCCTGGCCACTTAAATAGGACCATATGTAAACTTGACTTTGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371374.6
CDS-3UTR CCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCCGGGGAGCCCCTGGATaGTCCTCCCGGGCTTCTGCG +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTRGAPG*SSRASA
Trigger: CGCAGAAGCCCGGGAGGACCATCCAGGGGCTCCCCG...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000306764.11
CDS-3UTR CCA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACCTGCCAGCCAACAGGTaGGGAGGAAGGGGGCGAGAT +
Preference number: 4 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYLPANR*GGRGRD
Trigger: ATCTCGCCCCCTTCCTCCCCACCTGTTGGCTGGCAG...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TGGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAACAGCTCACACCAGGACGCCGAGTTTaGATGATTTTTGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: WPGENNAHTSGLGLKQLTPGRRV*MIFGFG
Trigger: CCCAAAGCCAAAAATCATCCAAACTCGGCGTCCTGG...TGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGGTTGGACACGGAGGGTaGCAGGCCAGGACGCCGAGT +
Preference number: 4 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQVGHGG*QARTPS
Trigger: ACTCGGCGTCCTGGCCTGCCACCCTCCGTGTCCAAC...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGGTTGGACACGGAGGGTaGCAGGCCAGGACGCCGAGT +
Preference number: 4 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHEVGHGG*QARTPS
Trigger: ACTCGGCGTCCTGGCCTGCCACCCTCCGTGTCCAAC...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TGGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAACAGCTCACATCAGCTTTGAAAGGCTaGATGCTGCAGTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: WPGENNAHTSGLGLKQLTSALKG*MLQCSA
Trigger: TGCAGAGCACTGCAGCATCCAGCCTTTCAAAGCTGA...TGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCGGAGGCTCGGGCTCCTaGAGCCCGCTCCCACTGCAC +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTGGSGS*SPLPLH
Trigger: GTGCAGTGGGAGCGGGCTCCAGGAGCCCGAGCCTCC...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR TCA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCCTGGCGTGGCATCGTTaGTGGGCTGCCAGCCAACAG +
Preference number: 4 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICLAWHR*WAASQQ
Trigger: CTGTTGGCTGGCAGCCCATCAACGATGCCACGCCAG...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp AATGTGCGTCATGGAAATGCTGAGGCGATTCTGACTTTCACAGTGCTAGGAGGTAGAGGAGGTCATAGTTaGGGACTGGCGTGGCATCGT +
Preference number: 4 (lower is better)
Translates to: NVRHGNAEAILTFTVLGGRGGHS*GLAWHR
Trigger: ACGATGCCACGCCAGTCCTCAACTATGACCTCCTCT...ACCTCCTAGCACTGTGAAAGTCAGAATCGCCTCAGCATTTCCATGACGCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCGCCTCGGTGCTGCCTTaGTCTGGGGACGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTASVLP*SGDGWR
Trigger: CCTCCAGCCGTCCCCAGAGCAAGGCAGCACCGAGGC...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR GCA 90 bp TGGTGTTTGAAATCTATTGAGGAATATCTTTGGGGCCAAGGTCAATTTTGCCTCGGGTCAGTGGGATTCTaGCTGCTGCCCGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: WCLKSIEEYLWGQGQFCLGSVGF*LLPAPP
Trigger: GGGAGGAGCGGGCAGCAGGCAGAATCCCACTGACCC...GAGGCAAAATTGACCTTGGCCCCAAAGATATTCCTCAATAGATTTCAAACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371374.6
CDS-3UTR CCA 90 bp TGGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAACAGCTCACAGTCTCCATCTGTCTCTaGAGTCTGAACCTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: WPGENNAHTSGLGLKQLTVSICL*SLNLCK
Trigger: TTTGCACAGGTTCAGACTCCAGAGACAGATGGAGAC...TGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGCTGCCAGCCAACAGGTaGGGAGGAAGGGGGCGAGAT +
Preference number: 4 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQLPANR*GGRGRD
Trigger: ATCTCGCCCCCTTCCTCCCCACCTGTTGGCTGGCAG...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCTGCTCTGGGGACGGCTaGAGGCTCGGGCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTCSGDG*RLGLLE
Trigger: CTCCAGGAGCCCGAGCCTCCAGCCGTCCCCAGAGCA...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR TCA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGTTAATGGGTATGATATaGTCAGGAGACATATCACCT +
Preference number: 4 (lower is better)
Translates to: SITLDKPPQRGWESSTGELMGMI*SGDISP
Trigger: AGGTGATATGTCTCCTGATCATATCATACCCATTAA...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGATAAATAGGTTTGTCTaGAATCAGTCTCTATCACCC +
Preference number: 4 (lower is better)
Translates to: SITLDKPPQRGWESSTGEINRFV*NQSLSP
Trigger: GGGTGATAGAGACTGATTTCAGACAAACCTATTTAT...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCACACACGGGTGTCGCGTaGGTAGGACCGGCATACATG +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPHTGVA*VGPAYM
Trigger: CATGTATGCCGGTCCTACTCACGCGACACCCGTGTG...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACGCATCGTTGATGGGCTaGCAGCCAACAGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHASLMG*QPTGGE
Trigger: CTCCCCACCTGTTGGCTGGCAGCCCATCAACGATGC...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGCACAAACAACACAGGTaGTATTTGTTACTGATGTCT +
Preference number: 4 (lower is better)
Translates to: SITLDKPPQRGWESSTGEHKQHR*YLLLMS
Trigger: AGACATCAGTAACAAATAGCACCTGTGTTGTTTGTG...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTGGAGCCCGCTCCCACTaGACGCAGCCCTCCGCGTCT +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFGARSH*TQPSAS
Trigger: AGACGCGGAGGGCTGCGTGCAGTGGGAGCGGGCTCC...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR GCA 90 bp TGCTCAGCTGCTGCTGCATTCTGGGGATTTAGCTTCATCCCAATAATCTACAACCTTCCAGATGGATATTaGTGTGGCCAGGCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: CSAAAAFWGFSFIPIIYNLPDGY*CGQASV
Trigger: CACCGAGGCCTGGCCACAGCAATATCCATCTGGAAG...GTTGTAGATTATTGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGCTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR CCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACGTGCACGACGACACTTaGGGTGGACTCAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHVHDDT*GGLSPC
Trigger: GCAGGGACTGAGTCCACCCCAAGTGTCGTCGTGCAC...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCGTGCACGACGACACTTaGGGTGGACTCAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPVHDDT*GGLSPC
Trigger: GCAGGGACTGAGTCCACCCCAAGTGTCGTCGTGCAC...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGAGTCAAGTTTACATATaGTCCTATTTAAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: SITLDKPPQRGWESSTGESQVYI*SYLSGQ
Trigger: CTGGCCACTTAAATAGGACCATATGTAAACTTGACT...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGCCAGACTTGTTGAGCTaGAATATTCTGATCATTTTC +
Preference number: 4 (lower is better)
Translates to: SITLDKPPQRGWESSTGEPDLLS*NILIIF
Trigger: GAAAATGATCAGAATATTCCAGCTCAACAAGTCTGG...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGCTCTCTCTGCCGCCGTaGGTCAGTGGGATTCTGCCT +
Preference number: 4 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHELSLPP*VSGILP
Trigger: AGGCAGAATCCCACTGACCCACGGCGGCAGAGAGAG...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371374.6
CDS-3UTR TCA 90 bp TGGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAACAGCTCACAGAAAATAAATGCTGGTaGTCATGCATGTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: WPGENNAHTSGLGLKQLTENKCW*SCMSWE
Trigger: TTCCCAGGACATGCATGATCACCAGCATTTATTTTC...TGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TGGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAACAGCTCACACAGGGGAGTGGTGTTTaGAATCTATTGAGGAATATC +
Preference number: 4 (lower is better)
Translates to: WPGENNAHTSGLGLKQLTQGSGV*NLLRNI
Trigger: GATATTCCTCAATAGATTTCAAACACCACTCCCCTG...TGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp AATGTGCGTCATGGAAATGCTGAGGCGATTCTGACTTTCACAGTGCTAGGAGGTGAGAAGAGTCAGCTTTaGAAGGCTGGATGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: NVRHGNAEAILTFTVLGGEKSQL*KAGCCS
Trigger: ACTGCAGCATCCAGCCTTTCAAAGCTGACTCTTCTC...ACCTCCTAGCACTGTGAAAGTCAGAATCGCCTCAGCATTTCCATGACGCACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp AGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGGCCAGGAGAGAACAACGTCAGGGACGTGTCCCTaGTGCCCTGGGCTCCTCATT +
Preference number: 4 (lower is better)
Translates to: SQSQVYIWSYLSGQERTTSGTCP*CPGLLI
Trigger: AATGAGGAGCCCAGGGCAGCAGGGACACGTCCCTGA...CGTTGTTCTCTCCTGGCCACTTAAATAGGACCATATGTAAACTTGACTTTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR GCA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCTGGGGTGGAGCCAAGTaGAGTTTGTCTCCATCTGTC +
Preference number: 4 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPWGGAK*SLSPSV
Trigger: GACAGATGGAGACAAACTGCACTTGGCTCCACCCCA...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCTCACTGTCGCACACGTaGACGACGACACTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICSLSHT*TTTLGV
Trigger: CACCCCAAGTGTCGTCGTGCACGTGTGCGACAGTGA...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTTCACTGTCGCACACGTaGACGACGACACTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCSLSHT*TTTLGV
Trigger: CACCCCAAGTGTCGTCGTGCACGTGTGCGACAGTGA...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACTCACTGTCGCACACGTaGACGACGACACTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHSLSHT*TTTLGV
Trigger: CACCCCAAGTGTCGTCGTGCACGTGTGCGACAGTGA...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTGCCTCGGTGCTGCCTTaGTCTGGGGACGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFASVLP*SGDGWR
Trigger: CCTCCAGCCGTCCCCAGAGCAAGGCAGCACCGAGGC...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR GCA 90 bp GATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGCCAGGCCTCGGTGCTaGCTTGCTCTGGGGACGGCT +
Preference number: 4 (lower is better)
Translates to: DRDISCSQSQVYIWSYLSARPRC*LALGTA
Trigger: AGCCGTCCCCAGAGCAAGGCAGCACCGAGGCCTGGC...ACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATATCCCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR GCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTGTGGCCAGGCCTCGGTaGTGCCTTGCTCTGGGGACG +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFVARPR*CLALGT
Trigger: CGTCCCCAGAGCAAGGCAGCACCGAGGCCTGGCCAC...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR CCA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGGTGTCCCTGCTGCCCTaGGCTCCTCATTCCGATGAA +
Preference number: 4 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHEVSLLP*APHSDE
Trigger: TTCATCGGAATGAGGAGCCCAGGGCAGCAGGGACAC...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR CCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCCTGCCAGCCAACAGGTaGGGAGGAAGGGGGCGAGAT +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTLPANR*GGRGRD
Trigger: ATCTCGCCCCCTTCCTCCCCACCTGTTGGCTGGCAG...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCACGACGACACTTGGGGTaGACTCAGTCCCTGCATGGA +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPRRHLG*TQSLHG
Trigger: TCCATGCAGGGACTGAGTCCACCCCAAGTGTCGTCG...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TGGTGTTTGAAATCTATTGAGGAATATCTTTGGGGCCAAGGTCAATTTTGCCTCGTGCACGACGACACTTaGGGTGGACTCAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: WCLKSIEEYLWGQGQFCLVHDDT*GGLSPC
Trigger: GCAGGGACTGAGTCCACCCCAAGTGTCGTCGTGCAC...GAGGCAAAATTGACCTTGGCCCCAAAGATATTCCTCAATAGATTTCAAACACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp AGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGGCCAGGAGAGAACAACGGTGCACGACGACACTTaGGGTGGACTCAGTCCCTGC +
Preference number: 4 (lower is better)
Translates to: SQSQVYIWSYLSGQERTTVHDDT*GGLSPC
Trigger: GCAGGGACTGAGTCCACCCCAAGTGTCGTCGTGCAC...CGTTGTTCTCTCCTGGCCACTTAAATAGGACCATATGTAAACTTGACTTTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAAGGAAGGGGGCGAGATaGGAAACTGTTTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPRKGAR*ETVWQA
Trigger: AGCCTGCCAAACAGTTTCTCATCTCGCCCCCTTCCT...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGAGAGGAGGTCATAGTTaGGGACTGGCGTGGCATCGT +
Preference number: 4 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHERGGHS*GLAWHR
Trigger: ACGATGCCACGCCAGTCCTCAACTATGACCTCCTCT...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCATGTACAGGAGTAGATaGGGCCTGGCACACATAGCA +
Preference number: 4 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPMYRSR*GLAHIA
Trigger: TGCTATGTGTGCCAGGCCTCATCTACTCCTGTACAT...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR TCA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCGCGTCATGGAAATGCTaGGGCGATTCTGACTTTCAC +
Preference number: 4 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPASWKC*GDSDFH
Trigger: GTGAAAGTCAGAATCGCCTCAGCATTTCCATGACGC...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCTCAGGGACGTGTCCCTaGTGCCCTGGGCTCCTCATT +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTSGTCP*CPGLLI
Trigger: AATGAGGAGCCCAGGGCAGCAGGGACACGTCCCTGA...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR GCA 90 bp AATGTGCGTCATGGAAATGCTGAGGCGATTCTGACTTTCACAGTGCTAGGAGGTCCCAGTCCCTGTCTATaGAGCACAGTAAGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: NVRHGNAEAILTFTVLGGPSPCL*STVRKV
Trigger: GACTTTTCTTACTGTGCTGCATAGACAGGGACTGGG...ACCTCCTAGCACTGTGAAAGTCAGAATCGCCTCAGCATTTCCATGACGCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR GCA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGGCATCGTTGATGGGCTaGCAGCCAACAGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKRASLMG*QPTGGE
Trigger: CTCCCCACCTGTTGGCTGGCAGCCCATCAACGATGC...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACCTTCCAGATGGATATTaGTGTGGCCAGGCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHLPDGY*CGQASV
Trigger: CACCGAGGCCTGGCCACAGCAATATCCATCTGGAAG...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR CCA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTTTTGGCAGGCTGGGGTaGAGCCAAGTGCAGTTTGTC +
Preference number: 4 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCFGRLG*SQVQFV
Trigger: GACAAACTGCACTTGGCTCCACCCCAGCCTGCCAAA...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACTTTGGCAGGCTGGGGTaGAGCCAAGTGCAGTTTGTC +
Preference number: 4 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHFGRLG*SQVQFV
Trigger: GACAAACTGCACTTGGCTCCACCCCAGCCTGCCAAA...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGAACTGTTTGGCAGGCTaGGGTGGAGCCAAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQNCLAG*GGAKCS
Trigger: ACTGCACTTGGCTCCACCCCAGCCTGCCAAACAGTT...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACAACTGTTTGGCAGGCTaGGGTGGAGCCAAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHNCLAG*GGAKCS
Trigger: ACTGCACTTGGCTCCACCCCAGCCTGCCAAACAGTT...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTCTGCCAGCCAACAGGTaGGGAGGAAGGGGGCGAGAT +
Preference number: 4 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGLPANR*GGRGRD
Trigger: ATCTCGCCCCCTTCCTCCCCACCTGTTGGCTGGCAG...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp TGCTCAGCTGCTGCTGCATTCTGGGGATTTAGCTTCATCCCAATAATCTACAACGACTCAGTCCCTGCATaGAGCTCATACTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: CSAAAAFWGFSFIPIIYNDSVPA*SSYFSP
Trigger: AGGAGAGAAGTATGAGCTCCATGCAGGGACTGAGTC...GTTGTAGATTATTGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGCTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTGTTGGACACGGAGGGTaGCAGGCCAGGACGCCGAGT +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFVGHGG*QARTPS
Trigger: ACTCGGCGTCCTGGCCTGCCACCCTCCGTGTCCAAC...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TGGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAACAGCTCACAAGTTCTACAGGGGAGTaGTGTTTGAAATCTATTGAG +
Preference number: 4 (lower is better)
Translates to: WPGENNAHTSGLGLKQLTSSTGE*CLKSIE
Trigger: CTCAATAGATTTCAAACACCACTCCCCTGTAGAACT...TGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TGCTCAGCTGCTGCTGCATTCTGGGGATTTAGCTTCATCCCAATAATCTACAACCTGAATTGGGTTTCATaGAGCTCTATCCTAGCTCGG +
Preference number: 4 (lower is better)
Translates to: CSAAAAFWGFSFIPIIYNLNWVS*SSILAR
Trigger: CCGAGCTAGGATAGAGCTTCATGAAACCCAATTCAG...GTTGTAGATTATTGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGCTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp GATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTCTGGCGTGGCATCGTTaGTGGGCTGCCAGCCAACAG +
Preference number: 4 (lower is better)
Translates to: DRDISCSQSQVYIWSYLSLAWHR*WAASQQ
Trigger: CTGTTGGCTGGCAGCCCATCAACGATGCCACGCCAG...ACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATATCCCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCATGCAGAGGACTGAGTaGGACCAGATAGGGATATCT +
Preference number: 4 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPMQRTE*DQIGIS
Trigger: AGATATCCCTATCTGGTCTCACTCAGTCCTCTGCAT...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR TCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACTGGGATGCAGAGGACTaGGTGAGACCAGATAGGGAT +
Preference number: 4 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHWDAED*VRPDRD
Trigger: ATCCCTATCTGGTCTCACTCAGTCCTCTGCATCCCA...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCATGGGGTGGAGCCAAGTaGAGTTTGTCTCCATCTGTC +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPWGGAK*SLSPSV
Trigger: GACAGATGGAGACAAACTGCACTTGGCTCCACCCCA...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTGGGGTGGAGCCAAGTaGAGTTTGTCTCCATCTGTC +
Preference number: 4 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQWGGAK*SLSPSV
Trigger: GACAGATGGAGACAAACTGCACTTGGCTCCACCCCA...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGGTGGACTCAGTCCCTaGATGGAGCTCATACTTCTC +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPGGLSP*MELILL
Trigger: GAGAAGTATGAGCTCCATGCAGGGACTGAGTCCACC...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGGGTGGACTCAGTCCCTaGATGGAGCTCATACTTCTC +
Preference number: 4 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQGGLSP*MELILL
Trigger: GAGAAGTATGAGCTCCATGCAGGGACTGAGTCCACC...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp TGGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAACAGCTCACAGATTTCTTTAGAACCTaGATTCTGGAAATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: WPGENNAHTSGLGLKQLTDFFRT*ILEIQG
Trigger: ACCCTGAATTTCCAGAATGCAGGTTCTAAAGAAATC...TGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp TGGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAACAGCTCACAAGTGCTAAAGAGATTTaGATAATGTGCGTCATGGAA +
Preference number: 4 (lower is better)
Translates to: WPGENNAHTSGLGLKQLTSAKEI*IMCVME
Trigger: TTCCATGACGCACATTATGCAAATCTCTTTAGCACT...TGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp TGGTGTTTGAAATCTATTGAGGAATATCTTTGGGGCCAAGGTCAATTTTGCCTCAACTGTTTGGCAGGCTaGGGTGGAGCCAAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: WCLKSIEEYLWGQGQFCLNCLAG*GGAKCS
Trigger: ACTGCACTTGGCTCCACCCCAGCCTGCCAAACAGTT...GAGGCAAAATTGACCTTGGCCCCAAAGATATTCCTCAATAGATTTCAAACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACGTCATAGTTGAGGACTaGCGTGGCATCGTTGATGGG +
Preference number: 4 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHVIVED*RGIVDG
Trigger: CCCATCAACGATGCCACGCCAGTCCTCAACTATGAC...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTCATAGTTGAGGACTaGCGTGGCATCGTTGATGGG +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPVIVED*RGIVDG
Trigger: CCCATCAACGATGCCACGCCAGTCCTCAACTATGAC...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGCTCCTGGTCCTAGTTTaGCCACAGCATAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHELLVLV*PQHRGG
Trigger: ACCTCCTCTATGCTGTGGCCAAACTAGGACCAGGAG...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCCGACGACACTTGGGGTaGACTCAGTCCCTGCATGGA +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTRRHLG*TQSLHG
Trigger: TCCATGCAGGGACTGAGTCCACCCCAAGTGTCGTCG...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCGGCTCCTCATTCCGATaGAGTATGATTCTCCCCTCA +
Preference number: 4 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPGSSFR*SMILPS
Trigger: TGAGGGGAGAATCATACTTCATCGGAATGAGGAGCC...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR TCA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGAGGAAGGGGGCGAGATaGGAAACTGTTTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKRRKGAR*ETVWQA
Trigger: AGCCTGCCAAACAGTTTCTCATCTCGCCCCCTTCCT...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCGACGCCGAGTTTGGATaGTTTTTGGCTTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICDAEFG*FLALGK
Trigger: CTTCCCCAAAGCCAAAAATCATCCAAACTCGGCGTC...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGACGCCGAGTTTGGATaGTTTTTGGCTTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPDAEFG*FLALGK
Trigger: CTTCCCCAAAGCCAAAAATCATCCAAACTCGGCGTC...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TGGTGTTTGAAATCTATTGAGGAATATCTTTGGGGCCAAGGTCAATTTTGCCTCTGGGATGCAGAGGACTaGGTGAGACCAGATAGGGAT +
Preference number: 4 (lower is better)
Translates to: WCLKSIEEYLWGQGQFCLWDAED*VRPDRD
Trigger: ATCCCTATCTGGTCTCACTCAGTCCTCTGCATCCCA...GAGGCAAAATTGACCTTGGCCCCAAAGATATTCCTCAATAGATTTCAAACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCGACATGGCTGGATGCTaGCAATCTGTGAGTTATAAG +
Preference number: 4 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPDMAGC*QSVSYK
Trigger: CTTATAACTCACAGATTGTCAGCATCCAGCCATGTC...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR TCA 90 bp AATGTGCGTCATGGAAATGCTGAGGCGATTCTGACTTTCACAGTGCTAGGAGGTCAGGGGAGTGGTGTTTaGAATCTATTGAGGAATATC +
Preference number: 4 (lower is better)
Translates to: NVRHGNAEAILTFTVLGGQGSGV*NLLRNI
Trigger: GATATTCCTCAATAGATTTCAAACACCACTCCCCTG...ACCTCCTAGCACTGTGAAAGTCAGAATCGCCTCAGCATTTCCATGACGCACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR TCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGATGTACAGGAGTAGATaGGGCCTGGCACACATAGCA +
Preference number: 4 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQMYRSR*GLAHIA
Trigger: TGCTATGTGTGCCAGGCCTCATCTACTCCTGTACAT...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGGCAGTGCTCTGCATCTaGATAGCGGAGCCTACTATT +
Preference number: 4 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHEAVLCI*IAEPTI
Trigger: AATAGTAGGCTCCGCTATTCAGATGCAGAGCACTGC...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR TCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGGCAGTGCTCTGCATCTaGATAGCGGAGCCTACTATT +
Preference number: 4 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQAVLCI*IAEPTI
Trigger: AATAGTAGGCTCCGCTATTCAGATGCAGAGCACTGC...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp TGCTCAGCTGCTGCTGCATTCTGGGGATTTAGCTTCATCCCAATAATCTACAACGGCCAAGGTCAATTTTaGCTCCAGGAATTTCAACAG +
Preference number: 4 (lower is better)
Translates to: CSAAAAFWGFSFIPIIYNGQGQF*LQEFQQ
Trigger: CTGTTGAAATTCCTGGAGGCAAAATTGACCTTGGCC...GTTGTAGATTATTGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGCTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACGCTAGGAGGTTCCCTTaGAACACTTCAAGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYARRFP*NTSRSL
Trigger: AAGACTCCTTGAAGTGTTGCAAGGGAACCTCCTAGC...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp AATGTGCGTCATGGAAATGCTGAGGCGATTCTGACTTTCACAGTGCTAGGAGGTGAGATTTGCATAATGTaGGTCATGGAAATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NVRHGNAEAILTFTVLGGEICIM*VMEMLR
Trigger: CCTCAGCATTTCCATGACGCACATTATGCAAATCTC...ACCTCCTAGCACTGTGAAAGTCAGAATCGCCTCAGCATTTCCATGACGCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCTTTGGCAGGCTGGGGTaGAGCCAAGTGCAGTTTGTC +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTFGRLG*SQVQFV
Trigger: GACAAACTGCACTTGGCTCCACCCCAGCCTGCCAAA...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGTTTGGCAGGCTGGGGTaGAGCCAAGTGCAGTTTGTC +
Preference number: 4 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKRFGRLG*SQVQFV
Trigger: GACAAACTGCACTTGGCTCCACCCCAGCCTGCCAAA...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAACTGTTTGGCAGGCTaGGGTGGAGCCAAGTGCAGT +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTNCLAG*GGAKCS
Trigger: ACTGCACTTGGCTCCACCCCAGCCTGCCAAACAGTT...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGACTCAGTCCCTGCATaGAGCTCATACTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPDSVPA*SSYFSP
Trigger: AGGAGAGAAGTATGAGCTCCATGCAGGGACTGAGTC...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACCCAGGACGCCGAGTTTaGATGATTTTTGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHPGRRV*MIFGFG
Trigger: CCCAAAGCCAAAAATCATCCAAACTCGGCGTCCTGG...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGGCTGCTGCTGCATTCTaGGGATTTAGCTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHEAAAAF*GFSFIP
Trigger: TGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGC...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGCTGCTGCTGCATTCTaGGGATTTAGCTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPAAAAF*GFSFIP
Trigger: TGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGC...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTAGGAAGGGGGCGAGATaGGAAACTGTTTGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGRKGAR*ETVWQA
Trigger: AGCCTGCCAAACAGTTTCTCATCTCGCCCCCTTCCT...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR TCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGCATCAGGACTGGGACTaGAACAGCTCACAAACAACA +
Preference number: 4 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQHQDWD*NSSQTT
Trigger: TGTTGTTTGTGAGCTGTTTCAGTCCCAGTCCTGATG...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCCATCAGGACTGGGACTaGAACAGCTCACAAACAACA +
Preference number: 4 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICHQDWD*NSSQTT
Trigger: TGTTGTTTGTGAGCTGTTTCAGTCCCAGTCCTGATG...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCATGCAGAGGACTGAGTaGGACCAGATAGGGATATCT +
Preference number: 4 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICMQRTE*DQIGIS
Trigger: AGATATCCCTATCTGGTCTCACTCAGTCCTCTGCAT...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGATGCAGAGGACTGAGTaGGACCAGATAGGGATATCT +
Preference number: 4 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHEMQRTE*DQIGIS
Trigger: AGATATCCCTATCTGGTCTCACTCAGTCCTCTGCAT...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGCATTCCGATGAAGTATaGTTCTCCCCTCATTCCTGC +
Preference number: 4 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHEHSDEV*FSPHSC
Trigger: GCAGGAATGAGGGGAGAATCATACTTCATCGGAATG...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371374.6
CDS-3UTR GCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCACCCAGTCCCTGTCTATaGAGCACAGTAAGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPPSPCL*STVRKV
Trigger: GACTTTTCTTACTGTGCTGCATAGACAGGGACTGGG...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR GCA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCTTGAAAGGCTTCTTCTaGAAAACAACGAGTGACAGC +
Preference number: 4 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPLKGFF*KTTSDS
Trigger: GCTGTCACTCGTTGTTTTGCAGAAGAAGCCTTTCAA...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR GCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGCTGACTGGTGAACATTaGACGCAAACAACGAGTTGG +
Preference number: 4 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQLTGEH*TQTTSW
Trigger: CCAACTCGTTGTTTGCGTGCAATGTTCACCAGTCAG...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR GCA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGGGTGGACTCAGTCCCTaGATGGAGCTCATACTTCTC +
Preference number: 4 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKRGGLSP*MELILL
Trigger: GAGAAGTATGAGCTCCATGCAGGGACTGAGTCCACC...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTTTAACATGCTCAGCTaGTGCTGCATTCTGGGGATT +
Preference number: 4 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYFNMLS*CCILGI
Trigger: AATCCCCAGAATGCAGCAGCAGCTGAGCATGTTAAA...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGCTAGGAGGTTCCCTTaGAACACTTCAAGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPARRFP*NTSRSL
Trigger: AAGACTCCTTGAAGTGTTGCAAGGGAACCTCCTAGC...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTCTCCATCTGTCTCTaGAGTCTGAACCTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPVSICL*SLNLCK
Trigger: TTTGCACAGGTTCAGACTCCAGAGACAGATGGAGAC...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGGTCTCCATCTGTCTCTaGAGTCTGAACCTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQVSICL*SLNLCK
Trigger: TTTGCACAGGTTCAGACTCCAGAGACAGATGGAGAC...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCGTCATAGTTGAGGACTaGCGTGGCATCGTTGATGGG +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTVIVED*RGIVDG
Trigger: CCCATCAACGATGCCACGCCAGTCCTCAACTATGAC...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCGACGACACTTGGGGTaGACTCAGTCCCTGCATGGA +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFRRHLG*TQSLHG
Trigger: TCCATGCAGGGACTGAGTCCACCCCAAGTGTCGTCG...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp GATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTCGACGACACTTGGGGTaGACTCAGTCCCTGCATGGA +
Preference number: 4 (lower is better)
Translates to: DRDISCSQSQVYIWSYLSRRHLG*TQSLHG
Trigger: TCCATGCAGGGACTGAGTCCACCCCAAGTGTCGTCG...ACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATATCCCTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TGCTCAGCTGCTGCTGCATTCTGGGGATTTAGCTTCATCCCAATAATCTACAACAATCTAGATAGGACATaGCTGGATGCTGACAATCTG +
Preference number: 4 (lower is better)
Translates to: CSAAAAFWGFSFIPIIYNNLDRT*LDADNL
Trigger: CAGATTGTCAGCATCCAGCCATGTCCTATCTAGATT...GTTGTAGATTATTGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGCTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TGGTGTTTGAAATCTATTGAGGAATATCTTTGGGGCCAAGGTCAATTTTGCCTCGCTGCTGCTGCATTCTaGGGATTTAGCTTCATCCCA +
Preference number: 4 (lower is better)
Translates to: WCLKSIEEYLWGQGQFCLAAAAF*GFSFIP
Trigger: TGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGC...GAGGCAAAATTGACCTTGGCCCCAAAGATATTCCTCAATAGATTTCAAACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TGGTGTTTGAAATCTATTGAGGAATATCTTTGGGGCCAAGGTCAATTTTGCCTCTCAGCTTTGAAAGGCTaGATGCTGCAGTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: WCLKSIEEYLWGQGQFCLSALKG*MLQCSA
Trigger: TGCAGAGCACTGCAGCATCCAGCCTTTCAAAGCTGA...GAGGCAAAATTGACCTTGGCCCCAAAGATATTCCTCAATAGATTTCAAACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp AGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGGCCAGGAGAGAACAACGCACAGGCAACCAGAGTaGAAACATCACAGTCCATGC +
Preference number: 4 (lower is better)
Translates to: SQSQVYIWSYLSGQERTTHRQPE*KHHSPC
Trigger: GCATGGACTGTGATGTTTCCACTCTGGTTGCCTGTG...CGTTGTTCTCTCCTGGCCACTTAAATAGGACCATATGTAAACTTGACTTTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
3UTR CAA 72 bp GGGACTGAAACAGCTCACAAACAACACAGGTGCTATTaGTTACTGATGTCTCTGGCTTGGATCAACATGAGA +
Preference number: 4 (lower is better)
Translates to: GTETAHKQHRCY*LLMSLAWINMR
Trigger: TCTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTGTGAGCTGTTTCAGTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTCAAACACTGACTGGTaGACATTGCACGCAAACAAC +
Preference number: 4 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQSNTDW*TLHANN
Trigger: GTTGTTTGCGTGCAATGTTCACCAGTCAGTGTTTGA...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR TCA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCTCAAACACTGACTGGTaGACATTGCACGCAAACAAC +
Preference number: 4 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICSNTDW*TLHANN
Trigger: GTTGTTTGCGTGCAATGTTCACCAGTCAGTGTTTGA...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR TCA 90 bp TGGTGTTTGAAATCTATTGAGGAATATCTTTGGGGCCAAGGTCAATTTTGCCTCCTGAATTGGGTTTCATaGAGCTCTATCCTAGCTCGG +
Preference number: 4 (lower is better)
Translates to: WCLKSIEEYLWGQGQFCLLNWVS*SSILAR
Trigger: CCGAGCTAGGATAGAGCTTCATGAAACCCAATTCAG...GAGGCAAAATTGACCTTGGCCCCAAAGATATTCCTCAATAGATTTCAAACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp AGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGGCCAGGAGAGAACAACGCTGAATTGGGTTTCATaGAGCTCTATCCTAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SQSQVYIWSYLSGQERTTLNWVS*SSILAR
Trigger: CCGAGCTAGGATAGAGCTTCATGAAACCCAATTCAG...CGTTGTTCTCTCCTGGCCACTTAAATAGGACCATATGTAAACTTGACTTTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTAGAGGAGGTCATAGTTaGGGACTGGCGTGGCATCGT +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFRGGHS*GLAWHR
Trigger: ACGATGCCACGCCAGTCCTCAACTATGACCTCCTCT...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp GATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTAGAGGAGGTCATAGTTaGGGACTGGCGTGGCATCGT +
Preference number: 4 (lower is better)
Translates to: DRDISCSQSQVYIWSYLSRGGHS*GLAWHR
Trigger: ACGATGCCACGCCAGTCCTCAACTATGACCTCCTCT...ACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATATCCCTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp AGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGGCCAGGAGAGAACAACGCATCAGGACTGGGACTaGAACAGCTCACAAACAACA +
Preference number: 4 (lower is better)
Translates to: SQSQVYIWSYLSGQERTTHQDWD*NSSQTT
Trigger: TGTTGTTTGTGAGCTGTTTCAGTCCCAGTCCTGATG...CGTTGTTCTCTCCTGGCCACTTAAATAGGACCATATGTAAACTTGACTTTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACGAAAATAAATGCTGGTaGTCATGCATGTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYENKCW*SCMSWE
Trigger: TTCCCAGGACATGCATGATCACCAGCATTTATTTTC...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACGACATGGCTGGATGCTaGCAATCTGTGAGTTATAAG +
Preference number: 4 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHDMAGC*QSVSYK
Trigger: CTTATAACTCACAGATTGTCAGCATCCAGCCATGTC...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCTCTTGTGTGTTTTTCTaGGGCTTGGGTAATGAAAGT +
Preference number: 4 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPSCVFF*GLGNES
Trigger: ACTTTCATTACCCAAGCCTCAGAAAAACACACAAGA...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGTATCCTAGCTCGGGCTaGAGATTTAGGATTGCTGAA +
Preference number: 4 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHEYPSSG*RFRIAE
Trigger: TTCAGCAATCCTAAATCTGCAGCCCGAGCTAGGATA...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCTATCCTAGCTCGGGCTaGAGATTTAGGATTGCTGAA +
Preference number: 4 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPYPSSG*RFRIAE
Trigger: TTCAGCAATCCTAAATCTGCAGCCCGAGCTAGGATA...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGGGCCAAGGTCAATTTTaGCTCCAGGAATTTCAACAG +
Preference number: 4 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHEGQGQF*LQEFQQ
Trigger: CTGTTGAAATTCCTGGAGGCAAAATTGACCTTGGCC...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCTTTAACATGCTCAGCTaGTGCTGCATTCTGGGGATT +
Preference number: 4 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPFNMLS*CCILGI
Trigger: AATCCCCAGAATGCAGCAGCAGCTGAGCATGTTAAA...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTCTCCTGGTCCTAGTTTaGCCACAGCATAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGLLVLV*PQHRGG
Trigger: ACCTCCTCTATGCTGTGGCCAAACTAGGACCAGGAG...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTGATGATTTTTGGCTTTaGGGAAGTCTTTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCDDFWL*GSLWVL
Trigger: GAGGACCCAAAGACTTCCCCAAAGCCAAAAATCATC...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCGATGATTTTTGGCTTTaGGGAAGTCTTTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICDDFWL*GSLWVL
Trigger: GAGGACCCAAAGACTTCCCCAAAGCCAAAAATCATC...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACGATGATTTTTGGCTTTaGGGAAGTCTTTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHDDFWL*GSLWVL
Trigger: GAGGACCCAAAGACTTCCCCAAAGCCAAAAATCATC...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCCCAGGACGCCGAGTTTaGATGATTTTTGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTPGRRV*MIFGFG
Trigger: CCCAAAGCCAAAAATCATCCAAACTCGGCGTCCTGG...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGCCAGGACGCCGAGTTTaGATGATTTTTGGCTTTGGG +
Preference number: 4 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKRPGRRV*MIFGFG
Trigger: CCCAAAGCCAAAAATCATCCAAACTCGGCGTCCTGG...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCAGTTCTACAGGGGAGTaGTGTTTGAAATCTATTGAG +
Preference number: 4 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPSSTGE*CLKSIE
Trigger: CTCAATAGATTTCAAACACCACTCCCCTGTAGAACT...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp TGCTCAGCTGCTGCTGCATTCTGGGGATTTAGCTTCATCCCAATAATCTACAACTGTTTTTCTGAGGCTTaGGTAATGAAAGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: CSAAAAFWGFSFIPIIYNCFSEA*VMKVLP
Trigger: GGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA...GTTGTAGATTATTGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGCTGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCTCAGCTTTGAAAGGCTaGATGCTGCAGTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTSALKG*MLQCSA
Trigger: TGCAGAGCACTGCAGCATCCAGCCTTTCAAAGCTGA...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR TCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCTGCAAAACAACGAGTaGCAGCCCAGTCCCTGTCTA +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFLQNNE*QPSPCL
Trigger: TAGACAGGGACTGGGCTGTCACTCGTTGTTTTGCAG...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR TCA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGACGCCGAGTTTGGATaGTTTTTGGCTTTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGDAEFG*FLALGK
Trigger: CTTCCCCAAAGCCAAAAATCATCCAAACTCGGCGTC...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR TCA 90 bp TGCTCAGCTGCTGCTGCATTCTGGGGATTTAGCTTCATCCCAATAATCTACAACTTAATGGGTATGATATaGTCAGGAGACATATCACCT +
Preference number: 4 (lower is better)
Translates to: CSAAAAFWGFSFIPIIYNLMGMI*SGDISP
Trigger: AGGTGATATGTCTCCTGATCATATCATACCCATTAA...GTTGTAGATTATTGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGCTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TGGTGTTTGAAATCTATTGAGGAATATCTTTGGGGCCAAGGTCAATTTTGCCTCGGTGCTATTTGTTACTaGTGTCTCTGGCTTGGATCA +
Preference number: 4 (lower is better)
Translates to: WCLKSIEEYLWGQGQFCLGAICY*CLWLGS
Trigger: TGATCCAAGCCAGAGACATCAGTAACAAATAGCACC...GAGGCAAAATTGACCTTGGCCCCAAAGATATTCCTCAATAGATTTCAAACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCGAAAATAAATGCTGGTaGTCATGCATGTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPENKCW*SCMSWE
Trigger: TTCCCAGGACATGCATGATCACCAGCATTTATTTTC...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR TCA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGCAGGGGAGTGGTGTTTaGAATCTATTGAGGAATATC +
Preference number: 4 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHEQGSGV*NLLRNI
Trigger: GATATTCCTCAATAGATTTCAAACACCACTCCCCTG...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTCTTGTGTGTTTTTCTaGGGCTTGGGTAATGAAAGT +
Preference number: 4 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYSCVFF*GLGNES
Trigger: ACTTTCATTACCCAAGCCTCAGAAAAACACACAAGA...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGCGTCATGGAAATGCTaGGGCGATTCTGACTTTCAC +
Preference number: 4 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGASWKC*GDSDFH
Trigger: GTGAAAGTCAGAATCGCCTCAGCATTTCCATGACGC...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR TCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACTTTTCCTTAACCTCCTaGTTGGTAAAGACCTCGACA +
Preference number: 4 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHFSLTS*LVKTST
Trigger: TGTCGAGGTCTTTACCAATCAGGAGGTTAAGGAAAA...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR GCA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACATTGAAGTCAGTGATTaGTTGAAAGGCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYIEVSD*LKGFFC
Trigger: GCAGAAGAAGCCTTTCAAGCAATCACTGACTTCAAT...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR GCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTGGTGGACTCAGTCCCTaGATGGAGCTCATACTTCTC +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFGGLSP*MELILL
Trigger: GAGAAGTATGAGCTCCATGCAGGGACTGAGTCCACC...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGAGATTTGCATAATGTaGGTCATGGAAATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPEICIM*VMEMLR
Trigger: CCTCAGCATTTCCATGACGCACATTATGCAAATCTC...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCGAGATTTGCATAATGTaGGTCATGGAAATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICEICIM*VMEMLR
Trigger: CCTCAGCATTTCCATGACGCACATTATGCAAATCTC...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCTTTGAGCTATACACGTaGACAAATGATTCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPFELYT*TNDSVG
Trigger: ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAA...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp TGCTCAGCTGCTGCTGCATTCTGGGGATTTAGCTTCATCCCAATAATCTACAACAAACTCTTAAATAGCTaGAACGTCACACAGTCATCA +
Preference number: 4 (lower is better)
Translates to: CSAAAAFWGFSFIPIIYNKLLNS*NVTQSS
Trigger: TGATGACTGTGTGACGTTCCAGCTATTTAAGAGTTT...GTTGTAGATTATTGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGCTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCTCCTGGTCCTAGTTTaGCCACAGCATAGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFLLVLV*PQHRGG
Trigger: ACCTCCTCTATGCTGTGGCCAAACTAGGACCAGGAG...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGACTCAGTCCCTGCATaGAGCTCATACTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGDSVPA*SSYFSP
Trigger: AGGAGAGAAGTATGAGCTCCATGCAGGGACTGAGTC...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp AGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGGCCAGGAGAGAACAACGGATGATTTTTGGCTTTaGGGAAGTCTTTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SQSQVYIWSYLSGQERTTDDFWL*GSLWVL
Trigger: GAGGACCCAAAGACTTCCCCAAAGCCAAAAATCATC...CGTTGTTCTCTCCTGGCCACTTAAATAGGACCATATGTAAACTTGACTTTGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAAATCTAGATAGGACATaGCTGGATGCTGACAATCTG +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPNLDRT*LDADNL
Trigger: CAGATTGTCAGCATCCAGCCATGTCCTATCTAGATT...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACAAGTCAGTGATTGCTTaGAAGGCTTCTTCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHKSVIA*KASSAK
Trigger: TTTTGCAGAAGAAGCCTTTCAAGCAATCACTGACTT...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR TCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCGGTGCTATTTGTTACTaGTGTCTCTGGCTTGGATCA +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTGAICY*CLWLGS
Trigger: TGATCCAAGCCAGAGACATCAGTAACAAATAGCACC...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp GATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGCAGTGCTCTGCATCTaGATAGCGGAGCCTACTATT +
Preference number: 4 (lower is better)
Translates to: DRDISCSQSQVYIWSYLSAVLCI*IAEPTI
Trigger: AATAGTAGGCTCCGCTATTCAGATGCAGAGCACTGC...ACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATATCCCTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR TCA 90 bp GATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGAGAAGAGTCAGCTTTaGAAGGCTGGATGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: DRDISCSQSQVYIWSYLSEKSQL*KAGCCS
Trigger: ACTGCAGCATCCAGCCTTTCAAAGCTGACTCTTCTC...ACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATATCCCTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR TCA 90 bp GATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGCGTCATGGAAATGCTaGGGCGATTCTGACTTTCAC +
Preference number: 4 (lower is better)
Translates to: DRDISCSQSQVYIWSYLSASWKC*GDSDFH
Trigger: GTGAAAGTCAGAATCGCCTCAGCATTTCCATGACGC...ACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATATCCCTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR TCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAATACACGTGCACAAATaGTTCAGTTGGTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPIHVHK*FSWWKS
Trigger: AGATTTCCACCAACTGAATCATTTGTGCACGTGTAT...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAATTGAAGTCAGTGATTaGTTGAAAGGCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPIEVSD*LKGFFC
Trigger: GCAGAAGAAGCCTTTCAAGCAATCACTGACTTCAAT...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR GCA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGTATCCTAGCTCGGGCTaGAGATTTAGGATTGCTGAA +
Preference number: 4 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKRYPSSG*RFRIAE
Trigger: TTCAGCAATCCTAAATCTGCAGCCCGAGCTAGGATA...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCTATCCTAGCTCGGGCTaGAGATTTAGGATTGCTGAA +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTYPSSG*RFRIAE
Trigger: TTCAGCAATCCTAAATCTGCAGCCCGAGCTAGGATA...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCTTTAACATGCTCAGCTaGTGCTGCATTCTGGGGATT +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTFNMLS*CCILGI
Trigger: AATCCCCAGAATGCAGCAGCAGCTGAGCATGTTAAA...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGCTAGGAGGTTCCCTTaGAACACTTCAAGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGARRFP*NTSRSL
Trigger: AAGACTCCTTGAAGTGTTGCAAGGGAACCTCCTAGC...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCAGTTTGGATGATTTTTaGCTTTGGGGAAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPSLDDF*LWGSLW
Trigger: CCAAAGACTTCCCCAAAGCCAAAAATCATCCAAACT...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTAGTTTGGATGATTTTTaGCTTTGGGGAAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCSLDDF*LWGSLW
Trigger: CCAAAGACTTCCCCAAAGCCAAAAATCATCCAAACT...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTATTGAGGAATATCTTTaGGGCCAAGGTCAATTTTGC +
Preference number: 4 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCIEEYL*GQGQFC
Trigger: GCAAAATTGACCTTGGCCCCAAAGATATTCCTCAAT...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTAGTTCTACAGGGGAGTaGTGTTTGAAATCTATTGAG +
Preference number: 4 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCSSTGE*CLKSIE
Trigger: CTCAATAGATTTCAAACACCACTCCCCTGTAGAACT...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACTGTTTTTCTGAGGCTTaGGTAATGAAAGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHCFSEA*VMKVLP
Trigger: GGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACTTAATGGGTATGATATaGTCAGGAGACATATCACCT +
Preference number: 4 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHLMGMI*SGDISP
Trigger: AGGTGATATGTCTCCTGATCATATCATACCCATTAA...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp GATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTCATCAGGACTGGGACTaGAACAGCTCACAAACAACA +
Preference number: 4 (lower is better)
Translates to: DRDISCSQSQVYIWSYLSHQDWD*NSSQTT
Trigger: TGTTGTTTGTGAGCTGTTTCAGTCCCAGTCCTGATG...ACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATATCCCTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCGATGCTGACAATCTGTaGGTTATAAGATATCCTCAA +
Preference number: 4 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICDADNL*VIRYPQ
Trigger: TTGAGGATATCTTATAACTCACAGATTGTCAGCATC...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTGATGCTGACAATCTGTaGGTTATAAGATATCCTCAA +
Preference number: 4 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCDADNL*VIRYPQ
Trigger: TTGAGGATATCTTATAACTCACAGATTGTCAGCATC...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAATAAATAGGTTTGTCTaGAATCAGTCTCTATCACCC +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPINRFV*NQSLSP
Trigger: GGGTGATAGAGACTGATTTCAGACAAACCTATTTAT...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp AGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGGCCAGGAGAGAACAACGTCTTGTGTGTTTTTCTaGGGCTTGGGTAATGAAAGT +
Preference number: 4 (lower is better)
Translates to: SQSQVYIWSYLSGQERTTSCVFF*GLGNES
Trigger: ACTTTCATTACCCAAGCCTCAGAAAAACACACAAGA...CGTTGTTCTCTCCTGGCCACTTAAATAGGACCATATGTAAACTTGACTTTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp AGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGGCCAGGAGAGAACAACGATACACGTGCACAAATaGTTCAGTTGGTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: SQSQVYIWSYLSGQERTTIHVHK*FSWWKS
Trigger: AGATTTCCACCAACTGAATCATTTGTGCACGTGTAT...CGTTGTTCTCTCCTGGCCACTTAAATAGGACCATATGTAAACTTGACTTTGACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR TCA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCTTCACCAGATATATTTaGAGTCTAAGCTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICFTRYI*SLSSLS
Trigger: GCTCAAAGAGCTTAGACTTCAAATATATCTGGTGAA...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR TCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACTTCACCAGATATATTTaGAGTCTAAGCTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHFTRYI*SLSSLS
Trigger: GCTCAAAGAGCTTAGACTTCAAATATATCTGGTGAA...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR TCA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGTTTTCCTTAACCTCCTaGTTGGTAAAGACCTCGACA +
Preference number: 4 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKRFSLTS*LVKTST
Trigger: TGTCGAGGTCTTTACCAATCAGGAGGTTAAGGAAAA...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR GCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCTGACTGGTGAACATTaGACGCAAACAACGAGTTGG +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFLTGEH*TQTTSW
Trigger: CCAACTCGTTGTTTGCGTGCAATGTTCACCAGTCAG...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR GCA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCGATAGGGATATCTCATaGAGTCAAAGTCAAGTTTAC +
Preference number: 4 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPDRDIS*SQSQVY
Trigger: GTAAACTTGACTTTGACTGCATGAGATATCCCTATC...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGGATAGGGATATCTCATaGAGTCAAAGTCAAGTTTAC +
Preference number: 4 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHEDRDIS*SQSQVY
Trigger: GTAAACTTGACTTTGACTGCATGAGATATCCCTATC...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAATCCCTCAATCTGTTTaGTGTGTTATTGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPIPQSV*CVIVLV
Trigger: CACAAGAACAATAACACAGCAAACAGATTGAGGGAT...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGGAAAGTCAAAGCATATaGTTATTGTACACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQESQSI*LLYTPQ
Trigger: CTGAGGAGTGTACAATAAGCATATGCTTTGACTTTC...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGATTTCTTTAGAACCTaGATTCTGGAAATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPDFFRT*ILEIQG
Trigger: ACCCTGAATTTCCAGAATGCAGGTTCTAAAGAAATC...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTAGTGCTAAAGAGATTTaGATAATGTGCGTCATGGAA +
Preference number: 4 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCSAKEI*IMCVME
Trigger: TTCCATGACGCACATTATGCAAATCTCTTTAGCACT...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACAGTGCTAAAGAGATTTaGATAATGTGCGTCATGGAA +
Preference number: 4 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHSAKEI*IMCVME
Trigger: TTCCATGACGCACATTATGCAAATCTCTTTAGCACT...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCATTTGAGCTATACACGTaGACAAATGATTCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPFELYT*TNDSVG
Trigger: ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAA...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTGTCTCCATCTGTCTCTaGAGTCTGAACCTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFVSICL*SLNLCK
Trigger: TTTGCACAGGTTCAGACTCCAGAGACAGATGGAGAC...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCAGTCAAGTTTACATATaGTCCTATTTAAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICSQVYI*SYLSGQ
Trigger: CTGGCCACTTAAATAGGACCATATGTAAACTTGACT...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCAGTCAAGTTTACATATaGTCCTATTTAAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPSQVYI*SYLSGQ
Trigger: CTGGCCACTTAAATAGGACCATATGTAAACTTGACT...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACCCAGACTTGTTGAGCTaGAATATTCTGATCATTTTC +
Preference number: 4 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHPDLLS*NILIIF
Trigger: GAAAATGATCAGAATATTCCAGCTCAACAAGTCTGG...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp AGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGGCCAGGAGAGAACAACGATTGAGGAATATCTTTaGGGCCAAGGTCAATTTTGC +
Preference number: 4 (lower is better)
Translates to: SQSQVYIWSYLSGQERTTIEEYL*GQGQFC
Trigger: GCAAAATTGACCTTGGCCCCAAAGATATTCCTCAAT...CGTTGTTCTCTCCTGGCCACTTAAATAGGACCATATGTAAACTTGACTTTGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCATTCCGATGAAGTATaGTTCTCCCCTCATTCCAGA +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFHSDEV*FSPHSR
Trigger: TCTGGAATGAGGGGAGAATCATACTTCATCGGAATG...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000306764.11
CDS-3UTR TCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAAGTCAGTGATTGCTTaGAAGGCTTCTTCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTKSVIA*KASSAK
Trigger: TTTTGCAGAAGAAGCCTTTCAAGCAATCACTGACTT...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR TCA 90 bp TGGTGTTTGAAATCTATTGAGGAATATCTTTGGGGCCAAGGTCAATTTTGCCTCATAAATAGGTTTGTCTaGAATCAGTCTCTATCACCC +
Preference number: 4 (lower is better)
Translates to: WCLKSIEEYLWGQGQFCLINRFV*NQSLSP
Trigger: GGGTGATAGAGACTGATTTCAGACAAACCTATTTAT...GAGGCAAAATTGACCTTGGCCCCAAAGATATTCCTCAATAGATTTCAAACACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TGGTGTTTGAAATCTATTGAGGAATATCTTTGGGGCCAAGGTCAATTTTGCCTCTTCACCAGATATATTTaGAGTCTAAGCTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: WCLKSIEEYLWGQGQFCLFTRYI*SLSSLS
Trigger: GCTCAAAGAGCTTAGACTTCAAATATATCTGGTGAA...GAGGCAAAATTGACCTTGGCCCCAAAGATATTCCTCAATAGATTTCAAACACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp GATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGGCCAAGGTCAATTTTaGCTCCAGGAATTTCAACAG +
Preference number: 4 (lower is better)
Translates to: DRDISCSQSQVYIWSYLSGQGQF*LQEFQQ
Trigger: CTGTTGAAATTCCTGGAGGCAAAATTGACCTTGGCC...ACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATATCCCTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp GATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTTTTAACATGCTCAGCTaGTGCTGCATTCTGGGGATT +
Preference number: 4 (lower is better)
Translates to: DRDISCSQSQVYIWSYLSFNMLS*CCILGI
Trigger: AATCCCCAGAATGCAGCAGCAGCTGAGCATGTTAAA...ACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATATCCCTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp AGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGGCCAGGAGAGAACAACGCCAGACTTGTTGAGCTaGAATATTCTGATCATTTTC +
Preference number: 4 (lower is better)
Translates to: SQSQVYIWSYLSGQERTTPDLLS*NILIIF
Trigger: GAAAATGATCAGAATATTCCAGCTCAACAAGTCTGG...CGTTGTTCTCTCCTGGCCACTTAAATAGGACCATATGTAAACTTGACTTTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCTGTTTTTCTGAGGCTTaGGTAATGAAAGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTCFSEA*VMKVLP
Trigger: GGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTTGGCTTGGATCAACATaGGAGAACAAAGATATAGGC +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFWLGST*ENKDIG
Trigger: GCCTATATCTTTGTTCTCTCATGTTGATCCAAGCCA...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTGAAAATAAATGCTGGTaGTCATGCATGTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFENKCW*SCMSWE
Trigger: TTCCCAGGACATGCATGATCACCAGCATTTATTTTC...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCAGGGGAGTGGTGTTTaGAATCTATTGAGGAATATC +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFQGSGV*NLLRNI
Trigger: GATATTCCTCAATAGATTTCAAACACCACTCCCCTG...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGCACAAACAACACAGGTaGTATTTGTTACTGATGTCT +
Preference number: 4 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKRHKQHR*YLLLMS
Trigger: AGACATCAGTAACAAATAGCACCTGTGTTGTTTGTG...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCGATAGGGATATCTCATaGAGTCAAAGTCAAGTTTAC +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTDRDIS*SQSQVY
Trigger: GTAAACTTGACTTTGACTGCATGAGATATCCCTATC...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGATCCCTCAATCTGTTTaGTGTGTTATTGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKRIPQSV*CVIVLV
Trigger: CACAAGAACAATAACACAGCAAACAGATTGAGGGAT...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCGAAAGTCAAAGCATATaGTTATTGTACACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: IFLMETQDFTSNALLSFTESQSI*LLYTPQ
Trigger: CTGAGGAGTGTACAATAAGCATATGCTTTGACTTTC...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGGATTTCTTTAGAACCTaGATTCTGGAAATTCAGGGT +
Preference number: 4 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKRDFFRT*ILEIQG
Trigger: ACCCTGAATTTCCAGAATGCAGGTTCTAAAGAAATC...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTAATCTAGATAGGACATaGCTGGATGCTGACAATCTG +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFNLDRT*LDADNL
Trigger: CAGATTGTCAGCATCCAGCCATGTCCTATCTAGATT...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp GATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTAATCTAGATAGGACATaGCTGGATGCTGACAATCTG +
Preference number: 4 (lower is better)
Translates to: DRDISCSQSQVYIWSYLSNLDRT*LDADNL
Trigger: CAGATTGTCAGCATCCAGCCATGTCCTATCTAGATT...ACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATATCCCTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTATTGAGGAATATCTTTaGGGCCAAGGTCAATTTTGC +
Preference number: 4 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGIEEYL*GQGQFC
Trigger: GCAAAATTGACCTTGGCCCCAAAGATATTCCTCAAT...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTTGTTTTTCTGAGGCTTaGGTAATGAAAGTACTTCCC +
Preference number: 4 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGCFSEA*VMKVLP
Trigger: GGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR TCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTATACACGTGCACAAATaGTTCAGTTGGTGGAAATCT +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFIHVHK*FSWWKS
Trigger: AGATTTCCACCAACTGAATCATTTGTGCACGTGTAT...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGATAGGGATATCTCATaGAGTCAAAGTCAAGTTTAC +
Preference number: 4 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGDRDIS*SQSQVY
Trigger: GTAAACTTGACTTTGACTGCATGAGATATCCCTATC...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR GCA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTTTTGAGCTATACACGTaGACAAATGATTCAGTTGGT +
Preference number: 4 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGFELYT*TNDSVG
Trigger: ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAA...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp GATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTAGTTTGGATGATTTTTaGCTTTGGGGAAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: DRDISCSQSQVYIWSYLSSLDDF*LWGSLW
Trigger: CCAAAGACTTCCCCAAAGCCAAAAATCATCCAAACT...ACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATATCCCTATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CCA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTAGTCAAGTTTACATATaGTCCTATTTAAGTGGCCAG +
Preference number: 4 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGSQVYI*SYLSGQ
Trigger: CTGGCCACTTAAATAGGACCATATGTAAACTTGACT...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CCA 90 bp GATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTATTGAGGAATATCTTTaGGGCCAAGGTCAATTTTGC +
Preference number: 4 (lower is better)
Translates to: DRDISCSQSQVYIWSYLSIEEYL*GQGQFC
Trigger: GCAAAATTGACCTTGGCCCCAAAGATATTCCTCAAT...ACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATATCCCTATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTTTAATGGGTATGATATaGTCAGGAGACATATCACCT +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFLMGMI*SGDISP
Trigger: AGGTGATATGTCTCCTGATCATATCATACCCATTAA...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp GATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGATGCTGACAATCTGTaGGTTATAAGATATCCTCAA +
Preference number: 4 (lower is better)
Translates to: DRDISCSQSQVYIWSYLSDADNL*VIRYPQ
Trigger: TTGAGGATATCTTATAACTCACAGATTGTCAGCATC...ACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATATCCCTATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR TCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTGATGCTGACAATCTGTaGGTTATAAGATATCCTCAA +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFDADNL*VIRYPQ
Trigger: TTGAGGATATCTTATAACTCACAGATTGTCAGCATC...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp GATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTATCCCTCAATCTGTTTaGTGTGTTATTGTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: DRDISCSQSQVYIWSYLSIPQSV*CVIVLV
Trigger: CACAAGAACAATAACACAGCAAACAGATTGAGGGAT...ACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATATCCCTATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR GCA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTGAAAGTCAAAGCATATaGTTATTGTACACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFESQSI*LLYTPQ
Trigger: CTGAGGAGTGTACAATAAGCATATGCTTTGACTTTC...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS CCA 90 bp CGGCGCGGCGCGCCCCGCCTCCCTCTCTCTGCCGCCGTGGGTCAGTaGGATTCTGCCTGCTGCCCGCTCCTCCCCGCAACCTCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: RRGAPRLPLSAAVGQ*DSACCPLLPATSAA
Trigger: GGCGGCGGAGGTTGCGGGGAGGAGCGGGCAGCAGGCAGAATCCCACTGACCCACGGCGGCAGAGAGAGGGAGGCGGGGCGCGCCGCGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371374.6
CDS CCA 90 bp TATTGCTGTGGCCAGGCCTCGGTGCTGCCTTGCTCTGGGGACGGCTaGAGGCTCGGGCTCCTGGAGCCCGCTCCCACTGCACGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: YCCGQASVLPCSGDG*RLGLLEPAPTARSP
Trigger: AGGGCTGCGTGCAGTGGGAGCGGGCTCCAGGAGCCCGAGCCTCCAGCCGTCCCCAGAGCAAGGCAGCACCGAGGCCTGGCCACAGCAATA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS CCA 90 bp GTTGAGGACTGGCGTGGCATCGTTGATGGGCTGCCAGCCAACAGGTaGGGAGGAAGGGGGCGAGATGAGAAACTGTTTGGCAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: VEDWRGIVDGLPANR*GGRGRDEKLFGRLG
Trigger: CCCCAGCCTGCCAAACAGTTTCTCATCTCGCCCCCTTCCTCCCCACCTGTTGGCTGGCAGCCCATCAACGATGCCACGCCAGTCCTCAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGGAGCAGGCAGCTCAGTaGGACACGGAGGGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: SITLDKPPQRGWESSTGEEQAAQ*DTEGGR
Trigger: CCTGCCACCCTCCGTGTCCAACTGAGCTGCCTGCTC...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS CCA 90 bp TCAGAGTTGGGAGTGAAGGGAAGAGCTTCCAGATGGATATTGCTGTaGCCAGGCCTCGGTGCTGCCTTGCTCTGGGGACGGCTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: SELGVKGRASRWILL*PGLGAALLWGRLEA
Trigger: AGCCTCCAGCCGTCCCCAGAGCAAGGCAGCACCGAGGCCTGGCCACAGCAATATCCATCTGGAAGCTCTTCCCTTCACTCCCAACTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR CAA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGGCTTCCAGATGGATATaGCTGTGGCCAGGCCTCGGT +
Preference number: 5 (lower is better)
Translates to: SITLDKPPQRGWESSTGEASRWI*LWPGLG
Trigger: ACCGAGGCCTGGCCACAGCAATATCCATCTGGAAGC...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS CCA 90 bp ACAGGTGGGGAGGAAGGGGGCGAGATGAGAAACTGTTTGGCAGGCTaGGGTGGAGCCAAGTGCAGTTTGTCTCCATCTGTCTCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: TGGEEGGEMRNCLAG*GGAKCSLSPSVSGV
Trigger: GACTCCAGAGACAGATGGAGACAAACTGCACTTGGCTCCACCCCAGCCTGCCAAACAGTTTCTCATCTCGCCCCCTTCCTCCCCACCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS CCA 90 bp CAGGCAGCGTTGGACACGGAGGGTGGCAGGCCAGGACGCCGAGTTTaGATGATTTTTGGCTTTGGGGAAGTCTTTGGGTCCTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: QAALDTEGGRPGRRV*MIFGFGEVFGSSSS
Trigger: GGAAGAAGAGGACCCAAAGACTTCCCCAAAGCCAAAAATCATCCAAACTCGGCGTCCTGGCCTGCCACCCTCCGTGTCCAACGCTGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405162.2
CDS CCA 90 bp GACGGCTATTATCGAGAAGGAGCAGGCAGCGTTGGACACGGAGGGTaGCAGGCCAGGACGCCGAGTTTGGATGATTTTTGGCTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: DGYYREGAGSVGHGG*QARTPSLDDFWLWG
Trigger: TCCCCAAAGCCAAAAATCATCCAAACTCGGCGTCCTGGCCTGCCACCCTCCGTGTCCAACGCTGCCTGCTCCTTCTCGATAATAGCCGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000405162.2
CDS CCA 90 bp GCAGCTCAGTTGGACACGGAGGGTGGCAGGCCAGGACGCCGAGTTTaGATGATTTTTGGCTTTGGGGAAGTCTTTGGGTCCTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: AAQLDTEGGRPGRRV*MIFGFGEVFGSSSS
Trigger: GGAAGAAGAGGACCCAAAGACTTCCCCAAAGCCAAAAATCATCCAAACTCGGCGTCCTGGCCTGCCACCCTCCGTGTCCAACTGAGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS CCA 90 bp GGCTATTATCGAGAAGGAGCAGGCAGCTCAGTTGGACACGGAGGGTaGCAGGCCAGGACGCCGAGTTTGGATGATTTTTGGCTTTGGGGA +
Preference number: 5 (lower is better)
Translates to: GYYREGAGSSVGHGG*QARTPSLDDFWLWG
Trigger: TCCCCAAAGCCAAAAATCATCCAAACTCGGCGTCCTGGCCTGCCACCCTCCGTGTCCAACTGAGCTGCCTGCTCCTTCTCGATAATAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS GCA 90 bp GAAGTCTTTGGGTCCTCTTCTTCCTCTATGTCACTGTCGCACACGTaGACGACGACACTTGGGGTGGACTCAGTCCCTGCATGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: EVFGSSSSSMSLSHT*TTTLGVDSVPAWSS
Trigger: TGAGCTCCATGCAGGGACTGAGTCCACCCCAAGTGTCGTCGTGCACGTGTGCGACAGTGACATAGAGGAAGAAGAGGACCCAAAGACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS CCA 90 bp CTTCCTCTATGTCACTGTCGCACACGTGCACGACGACACTTGGGGTaGACTCAGTCCCTGCATGGAGCTCATACTTCTCTCCTGGTCCTA +
Preference number: 5 (lower is better)
Translates to: LPLCHCRTRARRHLG*TQSLHGAHTSLLVL
Trigger: TAGGACCAGGAGAGAAGTATGAGCTCCATGCAGGGACTGAGTCCACCCCAAGTGTCGTCGTGCACGTGTGCGACAGTGACATAGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS CCA 90 bp CTCTTCTTCCTCTATGTCACTGTCGCACACGTGCACGACGACACTTaGGGTGGACTCAGTCCCTGCATGGAGCTCATACTTCTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LFFLYVTVAHVHDDT*GGLSPCMELILLSW
Trigger: CCAGGAGAGAAGTATGAGCTCCATGCAGGGACTGAGTCCACCCCAAGTGTCGTCGTGCACGTGTGCGACAGTGACATAGAGGAAGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS CCA 90 bp GGAGGGTGGCAGGCCAGGACGCCGAGTTTGGATGATTTTTGGCTTTaGGGAAGTCTTTGGGTCCTCTTCTTCCTCTATGTCACTGTCGCA +
Preference number: 5 (lower is better)
Translates to: GGWQARTPSLDDFWL*GSLWVLFFLYVTVA
Trigger: TGCGACAGTGACATAGAGGAAGAAGAGGACCCAAAGACTTCCCCAAAGCCAAAAATCATCCAAACTCGGCGTCCTGGCCTGCCACCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS CCA 90 bp GGACACGGAGGGTGGCAGGCCAGGACGCCGAGTTTGGATGATTTTTaGCTTTGGGGAAGTCTTTGGGTCCTCTTCTTCCTCTATGTCACT +
Preference number: 5 (lower is better)
Translates to: GHGGWQARTPSLDDF*LWGSLWVLFFLYVT
Trigger: AGTGACATAGAGGAAGAAGAGGACCCAAAGACTTCCCCAAAGCCAAAAATCATCCAAACTCGGCGTCCTGGCCTGCCACCCTCCGTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGCCCGGGCTTCTGCGCTaGGTGGGCGCTGGCGCCCTC +
Preference number: 5 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKRPGLLR*VGAGAL
Trigger: GAGGGCGCCAGCGCCCACCAAGCGCAGAAGCCCGGG...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306764.11
CDS-3UTR CAA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGCTTTTCCTAGCCCTTTaGTCCGAGAGGCTTGATAAC +
Preference number: 5 (lower is better)
Translates to: SITLDKPPQRGWESSTGELFLAL*SERLDN
Trigger: GTTATCAAGCCTCTCGGACAAAAGGGCTAGGAAAAG...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGGGCCTCGGTGCTGCCTaGCTCTGGGGACGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQGLGAA*LWGRLE
Trigger: CTCCAGCCGTCCCCAGAGCAAGGCAGCACCGAGGCC...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR CAA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGGGCCTCGGTGCTGCCTaGCTCTGGGGACGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHEGLGAA*LWGRLE
Trigger: CTCCAGCCGTCCCCAGAGCAAGGCAGCACCGAGGCC...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS-3UTR CAA 90 bp AATGTGCGTCATGGAAATGCTGAGGCGATTCTGACTTTCACAGTGCTAGGAGGTACTGGCGTGGCATCGTaGATGGGCTGCCAGCCAACA +
Preference number: 5 (lower is better)
Translates to: NVRHGNAEAILTFTVLGGTGVAS*MGCQPT
Trigger: TGTTGGCTGGCAGCCCATCAACGATGCCACGCCAGT...ACCTCCTAGCACTGTGAAAGTCAGAATCGCCTCAGCATTTCCATGACGCACATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CAA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCCGTGCACGACGACACTaGGGGTGGACTCAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPRARRH*GWTQSL
Trigger: CAGGGACTGAGTCCACCCCAAGTGTCGTCGTGCACG...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS GCA 90 bp CAGCACAGTAAGAAAAGTCCTCCATCTTCAGGGACGTGTCCCTGCTaGCCTGGGCTCCTCATTCCGATGAAGTATGATTCTCCCCTCATT +
Preference number: 5 (lower is better)
Translates to: QHSKKSPPSSGTCPC*PGLLIPMKYDSPLI
Trigger: AATGAGGGGAGAATCATACTTCATCGGAATGAGGAGCCCAGGGCAGCAGGGACACGTCCCTGAAGATGGAGGACTTTTCTTACTGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR CAA 90 bp AATGTGCGTCATGGAAATGCTGAGGCGATTCTGACTTTCACAGTGCTAGGAGGTGAGATGAGAAACTGTTaGGCAGGCTGGGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: NVRHGNAEAILTFTVLGGEMRNC*AGWGGA
Trigger: GGCTCCACCCCAGCCTGCCAAACAGTTTCTCATCTC...ACCTCCTAGCACTGTGAAAGTCAGAATCGCCTCAGCATTTCCATGACGCACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CAA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACGAGCAGGCAGCTCAGTaGGACACGGAGGGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHEQAAQ*DTEGGR
Trigger: CCTGCCACCCTCCGTGTCCAACTGAGCTGCCTGCTC...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CAA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCGTGCACGACGACACTaGGGGTGGACTCAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCRARRH*GWTQSL
Trigger: CAGGGACTGAGTCCACCCCAAGTGTCGTCGTGCACG...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGGCTGTGTTATTGTTCTaGTGTGTTTTTCTGAGGCTT +
Preference number: 5 (lower is better)
Translates to: SITLDKPPQRGWESSTGEAVLLF*CVFLRL
Trigger: AAGCCTCAGAAAAACACACAAGAACAATAACACAGC...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS GCA 90 bp GTTGGGGAGGTCATTGAAGTCAGTGATTGCTTGAAAGGCTTCTTCTaGAAAACAACGAGTGACAGCCCAGTCCCTGTCTATGCAGCACAG +
Preference number: 5 (lower is better)
Translates to: VGEVIEVSDCLKGFF*KTTSDSPVPVYAAQ
Trigger: CTGTGCTGCATAGACAGGGACTGGGCTGTCACTCGTTGTTTTGCAGAAGAAGCCTTTCAAGCAATCACTGACTTCAATGACCTCCCCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR CAA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACGAGATGAGAAACTGTTaGGCAGGCTGGGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYEMRNC*AGWGGA
Trigger: GGCTCCACCCCAGCCTGCCAAACAGTTTCTCATCTC...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACACTGGCGTGGCATCGTaGATGGGCTGCCAGCCAACA +
Preference number: 5 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHTGVAS*MGCQPT
Trigger: TGTTGGCTGGCAGCCCATCAACGATGCCACGCCAGT...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCGAGCAGGCAGCTCAGTaGGACACGGAGGGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: IFLMETQDFTSNALLSFTEQAAQ*DTEGGR
Trigger: CCTGCCACCCTCCGTGTCCAACTGAGCTGCCTGCTC...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CAA 90 bp TGGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAACAGCTCACACAACACAGGTGCTATTaGTTACTGATGTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: WPGENNAHTSGLGLKQLTQHRCY*LLMSLA
Trigger: AGCCAGAGACATCAGTAACAAATAGCACCTGTGTTG...TGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp TCTATCACCCTGGACAAGCCTCCCCAACGAGGCTGGGAGAGTTCTACAGGGGAGAATCCCTCAATCTGTTaGCTGTGTTATTGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: SITLDKPPQRGWESSTGENPSIC*LCYCSC
Trigger: ACAAGAACAATAACACAGCAAACAGATTGAGGGATT...CTCCCCTGTAGAACTCTCCCAGCCTCGTTGGGGAGGCTTGTCCAGGGTGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp TGGCCAGGAGAGAACAACGCACACACATCAGGACTGGGACTGAAACAGCTCACAGAAGTCAGTGATTGCTaGAAAGGCTTCTTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: WPGENNAHTSGLGLKQLTEVSDC*KGFFCK
Trigger: TTTGCAGAAGAAGCCTTTCAAGCAATCACTGACTTC...TGTGAGCTGTTTCAGTCCCAGTCCTGATGTGTGTGCGTTGTTCTCTCCTGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR CAA 90 bp TGCTCAGCTGCTGCTGCATTCTGGGGATTTAGCTTCATCCCAATAATCTACAACGGAGCCAAGTGCAGTTaGTCTCCATCTGTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: CSAAAAFWGFSFIPIIYNGAKCS*SPSVSG
Trigger: TCCAGAGACAGATGGAGACAAACTGCACTTGGCTCC...GTTGTAGATTATTGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGCTGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACGAGATGAGAAACTGTTaGGCAGGCTGGGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHEMRNC*AGWGGA
Trigger: GGCTCCACCCCAGCCTGCCAAACAGTTTCTCATCTC...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp AGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGGCCAGGAGAGAACAACGACTGGCGTGGCATCGTaGATGGGCTGCCAGCCAACA +
Preference number: 5 (lower is better)
Translates to: SQSQVYIWSYLSGQERTTTGVAS*MGCQPT
Trigger: TGTTGGCTGGCAGCCCATCAACGATGCCACGCCAGT...CGTTGTTCTCTCCTGGCCACTTAAATAGGACCATATGTAAACTTGACTTTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCCGTGCACGACGACACTaGGGGTGGACTCAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: IFLMETQDFTSNALLSFTRARRH*GWTQSL
Trigger: CAGGGACTGAGTCCACCCCAAGTGTCGTCGTGCACG...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGCGTGCACGACGACACTaGGGGTGGACTCAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKRRARRH*GWTQSL
Trigger: CAGGGACTGAGTCCACCCCAAGTGTCGTCGTGCACG...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCCATGTCCTGGGAATGTaGGGATGCAGAGGACTGAGT +
Preference number: 5 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPHVLGM*GCRGLS
Trigger: ACTCAGTCCTCTGCATCCCAACATTCCCAGGACATG...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CAA 90 bp TGCTCAGCTGCTGCTGCATTCTGGGGATTTAGCTTCATCCCAATAATCTACAACCATGTCCTGGGAATGTaGGGATGCAGAGGACTGAGT +
Preference number: 5 (lower is better)
Translates to: CSAAAAFWGFSFIPIIYNHVLGM*GCRGLS
Trigger: ACTCAGTCCTCTGCATCCCAACATTCCCAGGACATG...GTTGTAGATTATTGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGCTGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACGCTTCCAGATGGATATaGCTGTGGCCAGGCCTCGGT +
Preference number: 5 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHASRWI*LWPGLG
Trigger: ACCGAGGCCTGGCCACAGCAATATCCATCTGGAAGC...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS GCA 90 bp ATTGCACGCAAACAACGAGTTGGGGAGGTCATTGAAGTCAGTGATTaGTTGAAAGGCTTCTTCTGCAAAACAACGAGTGACAGCCCAGTC +
Preference number: 5 (lower is better)
Translates to: IARKQRVGEVIEVSD*LKGFFCKTTSDSPV
Trigger: GACTGGGCTGTCACTCGTTGTTTTGCAGAAGAAGCCTTTCAAGCAATCACTGACTTCAATGACCTCCCCAACTCGTTGTTTGCGTGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR CAA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCCACGCAAACAACGAGTaGGGGAGGTCATTGAAGTCA +
Preference number: 5 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPHANNE*GRSLKS
Trigger: TGACTTCAATGACCTCCCCAACTCGTTGTTTGCGTG...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR CAA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGGGAGCCAAGTGCAGTTaGTCTCCATCTGTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQGAKCS*SPSVSG
Trigger: TCCAGAGACAGATGGAGACAAACTGCACTTGGCTCC...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTGGAGCCAAGTGCAGTTaGTCTCCATCTGTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCGAKCS*SPSVSG
Trigger: TCCAGAGACAGATGGAGACAAACTGCACTTGGCTCC...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCGGAGCCAAGTGCAGTTaGTCTCCATCTGTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICGAKCS*SPSVSG
Trigger: TCCAGAGACAGATGGAGACAAACTGCACTTGGCTCC...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGGAGATGAGAAACTGTTaGGCAGGCTGGGGTGGAGCC +
Preference number: 5 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKREMRNC*AGWGGA
Trigger: GGCTCCACCCCAGCCTGCCAAACAGTTTCTCATCTC...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCGCCAGGACGCCGAGTTaGGATGATTTTTGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICARTPS*DDFWLW
Trigger: CCAAAGCCAAAAATCATCCAAACTCGGCGTCCTGGC...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGGCCAGGACGCCGAGTTaGGATGATTTTTGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHEARTPS*DDFWLW
Trigger: CCAAAGCCAAAAATCATCCAAACTCGGCGTCCTGGC...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGCACGCAAACAACGAGTaGGGGAGGTCATTGAAGTCA +
Preference number: 5 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHEHANNE*GRSLKS
Trigger: TGACTTCAATGACCTCCCCAACTCGTTGTTTGCGTG...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR CAA 90 bp GATAGGGATATCTCATGCAGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTACTGGCGTGGCATCGTaGATGGGCTGCCAGCCAACA +
Preference number: 5 (lower is better)
Translates to: DRDISCSQSQVYIWSYLSTGVAS*MGCQPT
Trigger: TGTTGGCTGGCAGCCCATCAACGATGCCACGCCAGT...ACTTAAATAGGACCATATGTAAACTTGACTTTGACTGCATGAGATATCCCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp AGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGGCCAGGAGAGAACAACGGCCAGGACGCCGAGTTaGGATGATTTTTGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: SQSQVYIWSYLSGQERTTARTPS*DDFWLW
Trigger: CCAAAGCCAAAAATCATCCAAACTCGGCGTCCTGGC...CGTTGTTCTCTCCTGGCCACTTAAATAGGACCATATGTAAACTTGACTTTGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCACTGATGTCTCTGGCTaGGATCAACATGAGAGAACA +
Preference number: 5 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPTDVSG*DQHERT
Trigger: TGTTCTCTCATGTTGATCCAAGCCAGAGACATCAGT...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CAA 90 bp TGGTGTTTGAAATCTATTGAGGAATATCTTTGGGGCCAAGGTCAATTTTGCCTCCATGTCCTGGGAATGTaGGGATGCAGAGGACTGAGT +
Preference number: 5 (lower is better)
Translates to: WCLKSIEEYLWGQGQFCLHVLGM*GCRGLS
Trigger: ACTCAGTCCTCTGCATCCCAACATTCCCAGGACATG...GAGGCAAAATTGACCTTGGCCCCAAAGATATTCCTCAATAGATTTCAAACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS GCA 90 bp TTTCCCTCTGAATTGGGTTTCATGAAGCTCTATCCTAGCTCGGGCTaGAGATTTAGGATTGCTGAAGTTTATACGGACACGTCTGAAACT +
Preference number: 5 (lower is better)
Translates to: FPSELGFMKLYPSSG*RFRIAEVYTDTSET
Trigger: AGTTTCAGACGTGTCCGTATAAACTTCAGCAATCCTAAATCTGCAGCCCGAGCTAGGATAGAGCTTCATGAAACCCAATTCAGAGGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp TGCTCAGCTGCTGCTGCATTCTGGGGATTTAGCTTCATCCCAATAATCTACAACCCCTCAAATTTTTCCTaGCTCTCTTCTCCTTCAAAC +
Preference number: 5 (lower is better)
Translates to: CSAAAAFWGFSFIPIIYNPSNFS*LSSPSN
Trigger: GTTTGAAGGAGAAGAGAGCAAGGAAAAATTTGAGGG...GTTGTAGATTATTGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGCTGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR CAA 90 bp TGCTCAGCTGCTGCTGCATTCTGGGGATTTAGCTTCATCCCAATAATCTACAACGCTGCAGATTTAGGATaGCTGAAGTTTATACGGACA +
Preference number: 5 (lower is better)
Translates to: CSAAAAFWGFSFIPIIYNAADLG*LKFIRT
Trigger: TGTCCGTATAAACTTCAGCAATCCTAAATCTGCAGC...GTTGTAGATTATTGGGATGAAGCTAAATCCCCAGAATGCAGCAGCAGCTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCGCCAGGACGCCGAGTTaGGATGATTTTTGGCTTTGG +
Preference number: 5 (lower is better)
Translates to: IFLMETQDFTSNALLSFTARTPS*DDFWLW
Trigger: CCAAAGCCAAAAATCATCCAAACTCGGCGTCCTGGC...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp AAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTTTCCTAGCCCTTTaGTCCGAGAGGCTTGATAAC +
Preference number: 5 (lower is better)
Translates to: KLFELYTCTNDSVGGNLPLFLAL*SERLDN
Trigger: GTTATCAAGCCTCTCGGACAAAAGGGCTAGGAAAAG...GGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CAA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACCTTTTCCTAGCCCTTTaGTCCGAGAGGCTTGATAAC +
Preference number: 5 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHLFLAL*SERLDN
Trigger: GTTATCAAGCCTCTCGGACAAAAGGGCTAGGAAAAG...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGGGGCCAAGGTCAATTTaGCCTCCAGGAATTTCAACA +
Preference number: 5 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHEGPRSI*PPGIST
Trigger: TGTTGAAATTCCTGGAGGCAAAATTGACCTTGGCCC...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp TTGAGCTATACACGTGCACAAATGATTCAGTTGGTGGAAATCTTCCCCTTCCCCAAACAAATAACTTTTTaGAGCACACGGGTGTCGCGT +
Preference number: 5 (lower is better)
Translates to: LSYTRAQMIQLVEIFPFPKQITF*STRVSR
Trigger: ACGCGACACCCGTGTGCTCAAAAAAGTTATTTGTTT...GGGGAAGGGGAAGATTTCCACCAACTGAATCATTTGTGCACGTGTATAGCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CAA 90 bp TCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTTTTGTCCGAGAGGCTaGATAACAAGGAAGGAATCT +
Preference number: 5 (lower is better)
Translates to: SGFYKQCSPQFHQYCVQYFCPRG*ITRKES
Trigger: AGATTCCTTCCTTGTTATCAAGCCTCTCGGACAAAA...GTACTGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACCAACACAGGTGCTATTaGTTACTGATGTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHQHRCY*LLMSLA
Trigger: AGCCAGAGACATCAGTAACAAATAGCACCTGTGTTG...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp GCTCTCCTCAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGCAACACAGGTGCTATTaGTTACTGATGTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: ALLSFTSTVSSTILLYSQQHRCY*LLMSLA
Trigger: AGCCAGAGACATCAGTAACAAATAGCACCTGTGTTG...CTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTGAGGAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp AGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGGCCAGGAGAGAACAACGGGGCCAAGGTCAATTTaGCCTCCAGGAATTTCAACA +
Preference number: 5 (lower is better)
Translates to: SQSQVYIWSYLSGQERTTGPRSI*PPGIST
Trigger: TGTTGAAATTCCTGGAGGCAAAATTGACCTTGGCCC...CGTTGTTCTCTCCTGGCCACTTAAATAGGACCATATGTAAACTTGACTTTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp AATGTGCGTCATGGAAATGCTGAGGCGATTCTGACTTTCACAGTGCTAGGAGGTAATCCCTCAATCTGTTaGCTGTGTTATTGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: NVRHGNAEAILTFTVLGGNPSIC*LCYCSC
Trigger: ACAAGAACAATAACACAGCAAACAGATTGAGGGATT...ACCTCCTAGCACTGTGAAAGTCAGAATCGCCTCAGCATTTCCATGACGCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CAA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACGCACAAATGATTCAGTaGGTGGAAATCTTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHAQMIQ*VEIFPF
Trigger: GAAGGGGAAGATTTCCACCAACTGAATCATTTGTGC...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CAA 90 bp TGTTTTTCTGAGGCTTGGGTAATGAAAGTACTTCCCCACTCCATTGTAATCTGCGAAGTCAGTGATTGCTaGAAAGGCTTCTTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: CFSEAWVMKVLPHSIVICEVSDC*KGFFCK
Trigger: TTTGCAGAAGAAGCCTTTCAAGCAATCACTGACTTC...GCAGATTACAATGGAGTGGGGAAGTACTTTCATTACCCAAGCCTCAGAAAAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR CAA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTGCTGCAGATTTAGGATaGCTGAAGTTTATACGGACA +
Preference number: 5 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCAADLG*LKFIRT
Trigger: TGTCCGTATAAACTTCAGCAATCCTAAATCTGCAGC...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp AAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTCCATTTTGTCCGAGAGGCTaGATAACAAGGAAGGAATCT +
Preference number: 5 (lower is better)
Translates to: KLRILQAMLSSVSPVLCPFCPRG*ITRKES
Trigger: AGATTCCTTCCTTGTTATCAAGCCTCTCGGACAAAA...TGGACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp TGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCAGTACTGTGTTTTTGTCCGAGAGGCTaGATAACAAGGAAGGAATCT +
Preference number: 5 (lower is better)
Translates to: WKLRILQAMLSSVSPVLCFCPRG*ITRKES
Trigger: AGATTCCTTCCTTGTTATCAAGCCTCTCGGACAAAA...ACACAGTACTGGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCCTTTTCCTAGCCCTTTaGTCCGAGAGGCTTGATAAC +
Preference number: 5 (lower is better)
Translates to: IFLMETQDFTSNALLSFTLFLAL*SERLDN
Trigger: GTTATCAAGCCTCTCGGACAAAAGGGCTAGGAAAAG...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACAAACAAATAACTTTTTaGAGCACACGGGTGTCGCGT +
Preference number: 5 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHKQITF*STRVSR
Trigger: ACGCGACACCCGTGTGCTCAAAAAAGTTATTTGTTT...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp CAAACAACACAGGTGCTATTTGTTACTGATGTCTCTGGCTTGGATCAACATGAGATATACCCAGACTTGTaGAGCTGGAATATTCTGATC +
Preference number: 5 (lower is better)
Translates to: QTTQVLFVTDVSGLDQHEIYPDL*SWNILI
Trigger: GATCAGAATATTCCAGCTCAACAAGTCTGGGTATAT...CTCATGTTGATCCAAGCCAGAGACATCAGTAACAAATAGCACCTGTGTTGTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACGCTGTGTTATTGTTCTaGTGTGTTTTTCTGAGGCTT +
Preference number: 5 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHAVLLF*CVFLRL
Trigger: AAGCCTCAGAAAAACACACAAGAACAATAACACAGC...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp ATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTCACCGCACAAATGATTCAGTaGGTGGAAATCTTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: IFLMETQDFTSNALLSFTAQMIQ*VEIFPF
Trigger: GAAGGGGAAGATTTCCACCAACTGAATCATTTGTGC...GGTGAAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CAA 90 bp TGGTGTTTGAAATCTATTGAGGAATATCTTTGGGGCCAAGGTCAATTTTGCCTCGCTGTGTTATTGTTCTaGTGTGTTTTTCTGAGGCTT +
Preference number: 5 (lower is better)
Translates to: WCLKSIEEYLWGQGQFCLAVLLF*CVFLRL
Trigger: AAGCCTCAGAAAAACACACAAGAACAATAACACAGC...GAGGCAAAATTGACCTTGGCCCCAAAGATATTCCTCAATAGATTTCAAACACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp AGTCAAAGTCAAGTTTACATATGGTCCTATTTAAGTGGCCAGGAGAGAACAACGGCTGTGTTATTGTTCTaGTGTGTTTTTCTGAGGCTT +
Preference number: 5 (lower is better)
Translates to: SQSQVYIWSYLSGQERTTAVLLF*CVFLRL
Trigger: AAGCCTCAGAAAAACACACAAGAACAATAACACAGC...CGTTGTTCTCTCCTGGCCACTTAAATAGGACCATATGTAAACTTGACTTTGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp CTGGCACACATAGCAGAAGGTAATGGTTCTATAGGTGTATCTTCTGTAATGCACAATCCCTCAATCTGTTaGCTGTGTTATTGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: LAHIAEGNGSIGVSSVMHNPSIC*LCYCSC
Trigger: ACAAGAACAATAACACAGCAAACAGATTGAGGGATT...GTGCATTACAGAAGATACACCTATAGAACCATTACCTTCTGCTATGTGTGCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTCCCTCAAATTTTTCCTaGCTCTCTTCTCCTTCAAAC +
Preference number: 5 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGPSNFS*LSSPSN
Trigger: GTTTGAAGGAGAAGAGAGCAAGGAAAAATTTGAGGG...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS-3UTR CAA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTACTGATGTCTCTGGCTaGGATCAACATGAGAGAACA +
Preference number: 5 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFTDVSG*DQHERT
Trigger: TGTTCTCTCATGTTGATCCAAGCCAGAGACATCAGT...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp CAGTTTCACCAGTACTGTGTCCAGTACTATATTGCTATATTCACAGTAAAACGGATATACCCAGACTTGTaGAGCTGGAATATTCTGATC +
Preference number: 5 (lower is better)
Translates to: QFHQYCVQYYIAIFTVKRIYPDL*SWNILI
Trigger: GATCAGAATATTCCAGCTCAACAAGTCTGGGTATAT...CCGTTTTACTGTGAATATAGCAATATAGTACTGGACACAGTACTGGTGAAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp TATTTGAAGTCTAAGCTCTTTGAGCTATACACGTGCACAAATGATTCAGTTGGTAAACAAATAACTTTTTaGAGCACACGGGTGTCGCGT +
Preference number: 5 (lower is better)
Translates to: YLKSKLFELYTCTNDSVGKQITF*STRVSR
Trigger: ACGCGACACCCGTGTGCTCAAAAAAGTTATTTGTTT...ACCAACTGAATCATTTGTGCACGTGTATAGCTCAAAGAGCTTAGACTTCAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CAA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTGCACAAATGATTCAGTaGGTGGAAATCTTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFAQMIQ*VEIFPF
Trigger: GAAGGGGAAGATTTCCACCAACTGAATCATTTGTGC...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
CDS-3UTR CAA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTATATACCCAGACTTGTaGAGCTGGAATATTCTGATC +
Preference number: 5 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFIYPDL*SWNILI
Trigger: GATCAGAATATTCCAGCTCAACAAGTCTGGGTATAT...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS-3UTR CAA 90 bp TTTCATTTTCCTTATGGAAACTCAGGATTTTACAAGCAATGCTCTCCTCAGTTTAATCCCTCAATCTGTTaGCTGTGTTATTGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: FHFPYGNSGFYKQCSPQFNPSIC*LCYCSC
Trigger: ACAAGAACAATAACACAGCAAACAGATTGAGGGATT...AAACTGAGGAGAGCATTGCTTGTAAAATCCTGAGTTTCCATAAGGAAAATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS GCA 72 bp GTCTACGGGGGCCAGCTGCTAGCGCGCGGCGCTGCCTaGTCACCTGCCCGCCGGTGCGAGCGCGTGGGGGCG +
Preference number: 6 (lower is better)
Translates to: VYGGQLLARGAA*SPARRCERVGA
Trigger: CGCCCCCACGCGCTCGCACCGGCGGGCAGGTGAGCAGGCAGCGCCGCGCGCTAGCAGCTGGCCCCCGTAGAC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371374.6
CDS CCA 72 bp GGCGCGGCGCGCCCCGCCTCCCTCTCTCTGCCGCCGTaGGTCAGTGGGATTCTGCCTGCTGCCCGCTCCTCC +
Preference number: 6 (lower is better)
Translates to: GAARPASLSLPP*VSGILPAARSS
Trigger: GGAGGAGCGGGCAGCAGGCAGAATCCCACTGACCCACGGCGGCAGAGAGAGGGAGGCGGGGCGCGCCGCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371374.6
CDS GCA 72 bp CGGCTGGAGGCTCGGGCTCCTGGAGCCCGCTCCCACTaGACGCAGCCCTCCGCGTCTGAGGCAGCACAGCAG +
Preference number: 6 (lower is better)
Translates to: RLEARAPGARSH*TQPSASEAAQQ
Trigger: CTGCTGTGCTGCCTCAGACGCGGAGGGCTGCGTGCAGTGGGAGCGGGCTCCAGGAGCCCGAGCCTCCAGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS CCA 72 bp GGCCAGGCCTCGGTGCTGCCTTGCTCTGGGGACGGCTaGAGGCTCGGGCTCCTGGAGCCCGCTCCCACTGCA +
Preference number: 6 (lower is better)
Translates to: GQASVLPCSGDG*RLGLLEPAPTA
Trigger: TGCAGTGGGAGCGGGCTCCAGGAGCCCGAGCCTCCAGCCGTCCCCAGAGCAAGGCAGCACCGAGGCCTGGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS CCA 72 bp GCGCCCCGCCTCCCTCTCTCTGCCGCCGTGGGTCAGTaGGATTCTGCCTGCTGCCCGCTCCTCCCCGCAACC +
Preference number: 6 (lower is better)
Translates to: APRLPLSAAVGQ*DSACCPLLPAT
Trigger: GGTTGCGGGGAGGAGCGGGCAGCAGGCAGAATCCCACTGACCCACGGCGGCAGAGAGAGGGAGGCGGGGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371374.6
CDS GCA 72 bp CTCTCTGCCGCCGTGGGTCAGTGGGATTCTGCCTGCTaGCCGCTCCTCCCCGCAACCTCCGCCGCCGTCACC +
Preference number: 6 (lower is better)
Translates to: LSAAVGQWDSAC*PLLPATSAAVT
Trigger: GGTGACGGCGGCGGAGGTTGCGGGGAGGAGCGGGCAGCAGGCAGAATCCCACTGACCCACGGCGGCAGAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371374.6
CDS GCA 72 bp CCTCCCTCTCTCTGCCGCCGTGGGTCAGTGGGATTCTaGCTGCTGCCCGCTCCTCCCCGCAACCTCCGCCGC +
Preference number: 6 (lower is better)
Translates to: PPSLCRRGSVGF*LLPAPPRNLRR
Trigger: GCGGCGGAGGTTGCGGGGAGGAGCGGGCAGCAGGCAGAATCCCACTGACCCACGGCGGCAGAGAGAGGGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371374.6
CDS CCA 72 bp CGACTCTGGCTAACTGAGGAAATGTCGGGGAGCCCCTaGATGGTCCTCCCGGGCTTCTGCGCTTGGTGGGCG +
Preference number: 6 (lower is better)
Translates to: RLWLTEEMSGSP*MVLPGFCAWWA
Trigger: CGCCCACCAAGCGCAGAAGCCCGGGAGGACCATCCAGGGGCTCCCCGACATTTCCTCAGTTAGCCAGAGTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306764.11
CDS CCA 72 bp GGAGTGAAGGGAAGAGCTTCCAGATGGATATTGCTGTaGCCAGGCCTCGGTGCTGCCTTGCTCTGGGGACGG +
Preference number: 6 (lower is better)
Translates to: GVKGRASRWILL*PGLGAALLWGR
Trigger: CCGTCCCCAGAGCAAGGCAGCACCGAGGCCTGGCCACAGCAATATCCATCTGGAAGCTCTTCCCTTCACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330430.10
ENST00000405162.2
CDS GCA 72 bp GGGTCCTCTTCTTCCTCTATGTCACTGTCGCACACGTaGACGACGACACTTGGGGTGGACTCAGTCCCTGCA +
Preference number: 6 (lower is better)
Translates to: GSSSSSMSLSHT*TTTLGVDSVPA
Trigger: TGCAGGGACTGAGTCCACCCCAAGTGTCGTCGTGCACGTGTGCGACAGTGACATAGAGGAAGAAGAGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS CCA 72 bp TATCGAGAAGGAGCAGGCAGCGTTGGACACGGAGGGTaGCAGGCCAGGACGCCGAGTTTGGATGATTTTTGG +
Preference number: 6 (lower is better)
Translates to: YREGAGSVGHGG*QARTPSLDDFW
Trigger: CCAAAAATCATCCAAACTCGGCGTCCTGGCCTGCCACCCTCCGTGTCCAACGCTGCCTGCTCCTTCTCGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000405162.2
CDS CCA 72 bp GAGGAAGGGGGCGAGATGAGAAACTGTTTGGCAGGCTaGGGTGGAGCCAAGTGCAGTTTGTCTCCATCTGTC +
Preference number: 6 (lower is better)
Translates to: EEGGEMRNCLAG*GGAKCSLSPSV
Trigger: GACAGATGGAGACAAACTGCACTTGGCTCCACCCCAGCCTGCCAAACAGTTTCTCATCTCGCCCCCTTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS CCA 72 bp TTTGGCCACAGCATAGAGGAGGTCATAGTTGAGGACTaGCGTGGCATCGTTGATGGGCTGCCAGCCAACAGG +
Preference number: 6 (lower is better)
Translates to: FGHSIEEVIVED*RGIVDGLPANR
Trigger: CCTGTTGGCTGGCAGCCCATCAACGATGCCACGCCAGTCCTCAACTATGACCTCCTCTATGCTGTGGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS CCA 72 bp TGCACGACGACACTTGGGGTGGACTCAGTCCCTGCATaGAGCTCATACTTCTCTCCTGGTCCTAGTTTGGCC +
Preference number: 6 (lower is better)
Translates to: CTTTLGVDSVPA*SSYFSPGPSLA
Trigger: GGCCAAACTAGGACCAGGAGAGAAGTATGAGCTCCATGCAGGGACTGAGTCCACCCCAAGTGTCGTCGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS CCA 72 bp TGTCACTGTCGCACACGTGCACGACGACACTTGGGGTaGACTCAGTCCCTGCATGGAGCTCATACTTCTCTC +
Preference number: 6 (lower is better)
Translates to: CHCRTRARRHLG*TQSLHGAHTSL
Trigger: GAGAGAAGTATGAGCTCCATGCAGGGACTGAGTCCACCCCAAGTGTCGTCGTGCACGTGTGCGACAGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS CAA 72 bp CCTCTATGTCACTGTCGCACACGTGCACGACGACACTaGGGGTGGACTCAGTCCCTGCATGGAGCTCATACT +
Preference number: 6 (lower is better)
Translates to: PLCHCRTRARRH*GWTQSLHGAHT
Trigger: AGTATGAGCTCCATGCAGGGACTGAGTCCACCCCAAGTGTCGTCGTGCACGTGTGCGACAGTGACATAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS CAA 90 bp CCTCTTCTTCCTCTATGTCACTGTCGCACACGTGCACGACGACACTaGGGGTGGACTCAGTCCCTGCATGGAGCTCATACTTCTCTCCTG +
Preference number: 6 (lower is better)
Translates to: PLLPLCHCRTRARRH*GWTQSLHGAHTSLL
Trigger: CAGGAGAGAAGTATGAGCTCCATGCAGGGACTGAGTCCACCCCAAGTGTCGTCGTGCACGTGTGCGACAGTGACATAGAGGAAGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS CAA 90 bp CATGATAAAGAGGAGACGGCTATTATCGAGAAGGAGCAGGCAGCGTaGGACACGGAGGGTGGCAGGCCAGGACGCCGAGTTTGGATGATT +
Preference number: 6 (lower is better)
Translates to: HDKEETAIIEKEQAA*DTEGGRPGRRVWMI
Trigger: AATCATCCAAACTCGGCGTCCTGGCCTGCCACCCTCCGTGTCCAACGCTGCCTGCTCCTTCTCGATAATAGCCGTCTCCTCTTTATCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405162.2
CDS CCA 72 bp CTCTATGTCACTGTCGCACACGTGCACGACGACACTTaGGGTGGACTCAGTCCCTGCATGGAGCTCATACTT +
Preference number: 6 (lower is better)
Translates to: LYVTVAHVHDDT*GGLSPCMELIL
Trigger: AAGTATGAGCTCCATGCAGGGACTGAGTCCACCCCAAGTGTCGTCGTGCACGTGTGCGACAGTGACATAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS CCA 72 bp GGGTGGCAGGCCAGGACGCCGAGTTTGGATGATTTTTaGCTTTGGGGAAGTCTTTGGGTCCTCTTCTTCCTC +
Preference number: 6 (lower is better)
Translates to: GWQARTPSLDDF*LWGSLWVLFFL
Trigger: GAGGAAGAAGAGGACCCAAAGACTTCCCCAAAGCCAAAAATCATCCAAACTCGGCGTCCTGGCCTGCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS CAA 90 bp GCACGCAAACAACGAGTTGGGGAGGTCATTGAAGTCAGTGATTGCTaGAAAGGCTTCTTCTGCAAAACAACGAGTGACAGCCCAGTCCCT +
Preference number: 6 (lower is better)
Translates to: ARKQRVGEVIEVSDC*KGFFCKTTSDSPVP
Trigger: AGGGACTGGGCTGTCACTCGTTGTTTTGCAGAAGAAGCCTTTCAAGCAATCACTGACTTCAATGACCTCCCCAACTCGTTGTTTGCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS CAA 72 bp CAACGAGTTGGGGAGGTCATTGAAGTCAGTGATTGCTaGAAAGGCTTCTTCTGCAAAACAACGAGTGACAGC +
Preference number: 6 (lower is better)
Translates to: QRVGEVIEVSDC*KGFFCKTTSDS
Trigger: GCTGTCACTCGTTGTTTTGCAGAAGAAGCCTTTCAAGCAATCACTGACTTCAATGACCTCCCCAACTCGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS GCA 72 bp GTCATTGAAGTCAGTGATTGCTTGAAAGGCTTCTTCTaGAAAACAACGAGTGACAGCCCAGTCCCTGTCTAT +
Preference number: 6 (lower is better)
Translates to: VIEVSDCLKGFF*KTTSDSPVPVY
Trigger: ATAGACAGGGACTGGGCTGTCACTCGTTGTTTTGCAGAAGAAGCCTTTCAAGCAATCACTGACTTCAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6
CDS GCA 72 bp GAATTGGGTTTCATGAAGCTCTATCCTAGCTCGGGCTaGAGATTTAGGATTGCTGAAGTTTATACGGACACG +
Preference number: 6 (lower is better)
Translates to: ELGFMKLYPSSG*RFRIAEVYTDT
Trigger: CGTGTCCGTATAAACTTCAGCAATCCTAAATCTGCAGCCCGAGCTAGGATAGAGCTTCATGAAACCCAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306764.11
ENST00000330430.10
ENST00000371374.6
ENST00000405162.2
CDS GCA 72 bp AAACAACGAGTTGGGGAGGTCATTGAAGTCAGTGATTaGTTGAAAGGCTTCTTCTGCAAAACAACGAGTGAC +
Preference number: 6 (lower is better)
Translates to: KQRVGEVIEVSD*LKGFFCKTTSD
Trigger: GTCACTCGTTGTTTTGCAGAAGAAGCCTTTCAAGCAATCACTGACTTCAATGACCTCCCCAACTCGTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000306764.11
ENST00000371374.6