RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RC3H2 (Homo sapiens)

Ensembl gene IDs: ENSG00000056586

Ensembl transcript IDs: ENST00000335387.9, ENST00000357244.7, ENST00000373670.5, ENST00000398671.2, ENST00000423239.6, ENST00000454740.5, ENST00000471874.2, ENST00000478216.1, ENST00000498479.5

Found 993 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATGCGCCTGCTGTCGTACACAGGAGCATACATTCCAGAAGGTACTaGAGGAACTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGG +
Preference number: 1 (lower is better)
Translates to: DAPAVVHRSIHSRRY*RNWSIRLRRRRLVR
Trigger: CCTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTGGAATGTATGCTCCTGTGTACGACAGCAGGCGCATC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 90 bp CATATGGCATGGAAGCAGGTGGGAGGGAGGACTCTGGAACGTTATTaGACCTCACAAAGCGAGGAACACAGGGAGCCACACCAGCTGGTA +
Preference number: 1 (lower is better)
Translates to: HMAWKQVGGRTLERY*TSQSEEHREPHQLV
Trigger: TACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGTGAGGTCCAATAACGTTCCAGAGTCCTCCCTCCCACCTGCTTCCATGCCATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 90 bp GTTATTGGACCTCACAAAGCGAGGAACACAGGGAGCCACACCAGCTaGTACCGTTGGAGGTGGTGGATAGTATCCTGTCTGTGGGTACTG +
Preference number: 1 (lower is better)
Translates to: VIGPHKARNTGSHTS*YRWRWWIVSCLWVL
Trigger: CAGTACCCACAGACAGGATACTATCCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGTGAGGTCCAATAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 90 bp GTAATGATCGGCATATGGCATGGAAGCAGGTGGGAGGGAGGACTCTaGAACGTTATTGGACCTCACAAAGCGAGGAACACAGGGAGCCAC +
Preference number: 1 (lower is better)
Translates to: VMIGIWHGSRWEGGL*NVIGPHKARNTGSH
Trigger: GTGGCTCCCTGTGTTCCTCGCTTTGTGAGGTCCAATAACGTTCCAGAGTCCTCCCTCCCACCTGCTTCCATGCCATATGCCGATCATTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 90 bp GCTGTCGTACACAGGAGCATACATTCCAGAAGGTACTGGAGGAACTaGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGGAGAAGAATT +
Preference number: 1 (lower is better)
Translates to: AVVHRSIHSRRYWRN*SIRLRRRRLVRRRI
Trigger: AATTCTTCTCCTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTGGAATGTATGCTCCTGTGTACGACAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 90 bp AGGGGAAAATGTACTGTAATGATCGGCATATGGCATGGAAGCAGGTaGGAGGGAGGACTCTGGAACGTTATTGGACCTCACAAAGCGAGG +
Preference number: 1 (lower is better)
Translates to: RGKCTVMIGIWHGSR*EGGLWNVIGPHKAR
Trigger: CCTCGCTTTGTGAGGTCCAATAACGTTCCAGAGTCCTCCCTCCCACCTGCTTCCATGCCATATGCCGATCATTACAGTACATTTTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR TCA 90 bp TTGAGGCACAGAATTCAGCTCTGTTCCAACATTAGAGGGCCCAGCTaGGGTAGCTGCTACATTACTTACAGGAGTCTTGGGTGGAGAACC +
Preference number: 1 (lower is better)
Translates to: LRHRIQLCSNIRGPS*GSCYITYRSLGWRT
Trigger: GGTTCTCCACCCAAGACTCCTGTAAGTAATGTAGCAGCTACCTCAGCTGGGCCCTCTAATGTTGGAACAGAGCTGAATTCTGTGCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 90 bp GGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTaGCCTCTCTCTGAAGAAGTAATGAGTTGCTCTTGGCCTGCTGAA +
Preference number: 1 (lower is better)
Translates to: GLHPGNSTSVAWPKH*PLSEEVMSCSWPAE
Trigger: TTCAGCAGGCCAAGAGCAACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
3UTR CCA 90 bp ACTGTGCCCACTGATCTGGCTTTCTTCTTATCTGCTCCTCGCAACTaGTCTTCAAATGACCACAAGGTTCCCTTGGTAAAGGCACAGTTG +
Preference number: 1 (lower is better)
Translates to: TVPTDLAFFLSAPRN*SSNDHKVPLVKAQL
Trigger: CAACTGTGCCTTTACCAAGGGAACCTTGTGGTCATTTGAAGACCAGTTGCGAGGAGCAGATAAGAAGAAAGCCAGATCAGTGGGCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 90 bp AGAGACAAGAGGTGCTTTCTGAGTGTGGTACTGTGCCCACTGATCTaGCTTTCTTCTTATCTGCTCCTCGCAACTGGTCTTCAAATGACC +
Preference number: 1 (lower is better)
Translates to: RDKRCFLSVVLCPLI*LSSYLLLATGLQMT
Trigger: GGTCATTTGAAGACCAGTTGCGAGGAGCAGATAAGAAGAAAGCCAGATCAGTGGGCACAGTACCACACTCAGAAAGCACCTCTTGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR GCA 90 bp TGCTCCTCCAGAATCACATGGTCTTCACCTAAACTCTGTTTCTTCTaGTTTGGTGGCTCCTTTTGGTGCTGCTGTACTGGATGCCCATTT +
Preference number: 1 (lower is better)
Translates to: CSSRITWSSPKLCFF*FGGSFWCCCTGCPF
Trigger: AAATGGGCATCCAGTACAGCAGCACCAAAAGGAGCCACCAAAGCAGAAGAAACAGAGTTTAGGTGAAGACCATGTGATTCTGGAGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 90 bp ACATCCATTGGAGGTAAAGAATTGCTTCTAATAATGTCATCTCGTTaGTACATAGGTGGGCGCCAGATGCGCCTGCTGTCGTACACAGGA +
Preference number: 1 (lower is better)
Translates to: TSIGGKELLLIMSSR*YIGGRQMRLLSYTG
Trigger: TCCTGTGTACGACAGCAGGCGCATCTGGCGCCCACCTATGTACCAACGAGATGACATTATTAGAAGCAATTCTTTACCTCCAATGGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 90 bp GACAGATGTGGTGATGGGGAGGCAACTTGCATTGCTAATAGACACTaGGAGTGGCTGGCTAAAGCAAGAAGTTACCGGCAGAATTGTTTT +
Preference number: 1 (lower is better)
Translates to: DRCGDGEATCIANRH*EWLAKARSYRQNCF
Trigger: AAAACAATTCTGCCGGTAACTTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATCACCACATCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR TCA 90 bp ATTTTATTTTCAGTTACAGAATCTGCAGAGGGCCCAGCAGCATTCTaGCCATTAGCGCCAACCTTTCCCACTTTCTTCACGGTCTCCAGA +
Preference number: 1 (lower is better)
Translates to: ILFSVTESAEGPAAF*PLAPTFPTFFTVSR
Trigger: TCTGGAGACCGTGAAGAAAGTGGGAAAGGTTGGCGCTAATGGTCAGAATGCTGCTGGGCCCTCTGCAGATTCTGTAACTGAAAATAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR TCA 90 bp TGCGGAGGATATACTGGTACTCTAGTTAGAAATGGGCTGGATTTTTaGGGCACAGAATTCAGCTCTGTTCCAACATTAGAGGGCCCAGCT +
Preference number: 1 (lower is better)
Translates to: CGGYTGTLVRNGLDF*GTEFSSVPTLEGPA
Trigger: AGCTGGGCCCTCTAATGTTGGAACAGAGCTGAATTCTGTGCCTCAAAAATCCAGCCCATTTCTAACTAGAGTACCAGTATATCCTCCGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR GCA 90 bp TCACCTAAACTCTGTTTCTTCTGCTTTGGTGGCTCCTTTTGGTGCTaGTGTACTGGATGCCCATTTTCCACTGCCATTCCATTTAGCAAC +
Preference number: 1 (lower is better)
Translates to: SPKLCFFCFGGSFWC*CTGCPFSTAIPFSN
Trigger: GTTGCTAAATGGAATGGCAGTGGAAAATGGGCATCCAGTACAGCAGCACCAAAAGGAGCCACCAAAGCAGAAGAAACAGAGTTTAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR TCA 90 bp AAAGTGGCAGAGAACCAATGGCTTTACTTCACATTAAGCCCACCATaGCAGACAGAAGGTGACCACTACATAGAGAATGGATGCAACACA +
Preference number: 1 (lower is better)
Translates to: KVAENQWLYFTLSPP*QTEGDHYIENGCNT
Trigger: TGTGTTGCATCCATTCTCTATGTAGTGGTCACCTTCTGTCTGTCATGGTGGGCTTAATGTGAAGTAAAGCCATTGGTTCTCTGCCACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR TCA 90 bp GGTATGGTAACCTGTACGGGAAGATCTGGAAATCGCACCCCATTTTaGGATGATGGGTCCATCACTAAAGGGAATTATTGGATCTTCTTC +
Preference number: 1 (lower is better)
Translates to: GMVTCTGRSGNRTPF*DDGSITKGNYWIFF
Trigger: GAAGAAGATCCAATAATTCCCTTTAGTGATGGACCCATCATCTCAAAATGGGGTGCGATTTCCAGATCTTCCCGTACAGGTTACCATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR GCA 90 bp TCGATGATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTaGCCTTTCTTCGAAAGTGGCAGAGAACCAATGGCTTTACTTCAC +
Preference number: 1 (lower is better)
Translates to: SMISVGTILKKDQMN*PFFESGREPMALLH
Trigger: GTGAAGTAAAGCCATTGGTTCTCTGCCACTTTCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATCATCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR CCA 90 bp TCCTGTCTGTGGGTACTGTGGGACTTCAAAGGGTATCTGAGTCCTTaGATCTTGAAAATACTGAATGTTTTCAGAATGCGGAGGATATAC +
Preference number: 1 (lower is better)
Translates to: SCLWVLWDFKGYLSP*ILKILNVFRMRRIY
Trigger: GTATATCCTCCGCATTCTGAAAACATTCAGTATTTTCAAGATCCAAGGACTCAGATACCCTTTGAAGTCCCACAGTACCCACAGACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR TCA 90 bp CTGAAGATGTTTTGTGTAGTTCTGTTGCACAGAGGGTTCTTTCCCTaGGGGCACATAAGGAGCTCTCAAACTGTTAATAGGTCTCTATTT +
Preference number: 1 (lower is better)
Translates to: LKMFCVVLLHRGFFP*GHIRSSQTVNRSLF
Trigger: AAATAGAGACCTATTAACAGTTTGAGAGCTCCTTATGTGCCCTCAGGGAAAGAACCCTCTGTGCAACAGAACTACACAAAACATCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR TCA 90 bp CCAATGGCTTTACTTCACATTAAGCCCACCATGACAGACAGAAGGTaGCCACTACATAGAGAATGGATGCAACACAGAATAATCTCAACA +
Preference number: 1 (lower is better)
Translates to: PMALLHIKPTMTDRR*PLHREWMQHRIIST
Trigger: TGTTGAGATTATTCTGTGTTGCATCCATTCTCTATGTAGTGGTCACCTTCTGTCTGTCATGGTGGGCTTAATGTGAAGTAAAGCCATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR TCA 90 bp CCATTTCTTAGTTCAATTTCCTTGCTTAAAAGGTTTAAGGTAAGGTaGCGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAA +
Preference number: 1 (lower is better)
Translates to: PFLSSISLLKRFKVR*RPSSREFHFCCMAK
Trigger: TTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCACCTTACCTTAAACCTTTTAAGCAAGGAAATTGAACTAAGAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
3UTR GCA 90 bp TGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTaGAGTACAAATAAAAGCCACATGTGTTGTATCACAACTACAGTA +
Preference number: 1 (lower is better)
Translates to: CKLTTILPSGCTVDM*STNKSHMCCITTTV
Trigger: TACTGTAGTTGTGATACAACACATGTGGCTTTTATTTGTACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR TCA 90 bp AGATCACCAGGAAGGAATGCCCAGCTCTTCTTTTCAAATGTTGACTaGAATTTAGGTTTCAGTACAATACCTCCCACAAATCTGATGCAT +
Preference number: 1 (lower is better)
Translates to: RSPGRNAQLFFSNVD*NLGFSTIPPTNLMH
Trigger: ATGCATCAGATTTGTGGGAGGTATTGTACTGAAACCTAAATTTCAGTCAACATTTGAAAAGAAGAGCTGGGCATTCCTTCCTGGTGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR TCA 90 bp GTAAAGATCACCAGGAAGGAATGCCCAGCTCTTCTTTTCAAATGTTaGCTGAAATTTAGGTTTCAGTACAATACCTCCCACAAATCTGAT +
Preference number: 1 (lower is better)
Translates to: VKITRKECPALLFKC*LKFRFQYNTSHKSD
Trigger: ATCAGATTTGTGGGAGGTATTGTACTGAAACCTAAATTTCAGTCAACATTTGAAAAGAAGAGCTGGGCATTCCTTCCTGGTGATCTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR TCA 90 bp GACGTAAAAATATTCACACTAGAGCTTCACAATCGGTTGTACAATTaGCAAACAGGCCTCTTTTCCCAAACTTTCCAGCTAAGCAAATTT +
Preference number: 1 (lower is better)
Translates to: DVKIFTLELHNRLYN*QTGLFSQTFQLSKF
Trigger: AAATTTGCTTAGCTGGAAAGTTTGGGAAAAGAGGCCTGTTTGTCAATTGTACAACCGATTGTGAAGCTCTAGTGTGAATATTTTTACGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR TCA 90 bp CATTTTCCACTGCCATTCCATTTAGCAACTGATCATTTTGAGAACTaGTACCAAGCTGTATGTCCAAGATCTCTTCAATTGGTTCACTTT +
Preference number: 1 (lower is better)
Translates to: HFPLPFHLATDHFEN*YQAVCPRSLQLVHF
Trigger: AAAGTGAACCAATTGAAGAGATCTTGGACATACAGCTTGGTATCAGTTCTCAAAATGATCAGTTGCTAAATGGAATGGCAGTGGAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR TCA 90 bp GACAAGCTGAATGTATTTCCTGGAGTCTCCCAAATTATCTTGATGTaGAATTCTGTATATAGAACTAGTTCGATTGGGTACAAACAGCAT +
Preference number: 1 (lower is better)
Translates to: DKLNVFPGVSQIILM*NSVYRTSSIGYKQH
Trigger: ATGCTGTTTGTACCCAATCGAACTAGTTCTATATACAGAATTTCACATCAAGATAATTTGGGAGACTCCAGGAAATACATTCAGCTTGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
3UTR GCA 90 bp AATGGCTCAGTTACTGCACCGGATTGCTACAAACTCATAAAAAGCTaGTTGAAGCTTAAGTTAAATGTTGTCCAAATTCCAATCATTTCT +
Preference number: 1 (lower is better)
Translates to: NGSVTAPDCYKLIKS*LKLKLNVVQIPIIS
Trigger: AGAAATGATTGGAATTTGGACAACATTTAACTTAAGCTTCAAGCAGCTTTTTATGAGTTTGTAGCAATCCGGTGCAGTAACTGAGCCATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR CAA 90 bp GCATATGGCATGGAAGCAGGTGGGAGGGAGGACTCTGGAACGTTATaGGACCTCACAAAGCGAGGAACACAGGGAGCCACACCAGCTGGT +
Preference number: 2 (lower is better)
Translates to: AYGMEAGGREDSGTL*DLTKRGTQGATPAG
Trigger: ACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGTGAGGTCCAATAACGTTCCAGAGTCCTCCCTCCCACCTGCTTCCATGCCATATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CCA 90 bp CAGAAGGTACTGGAGGAACTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGACCAGCTGGTACCGTTaGAGGTGGTGGATAGTATCC +
Preference number: 2 (lower is better)
Translates to: QKVLEELVHTAAEEEAGKTSWYR*RWWIVS
Trigger: GGATACTATCCACCACCTCCAACGGTACCAGCTGGT...CTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR TCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCCCCACCTCAGCCTCCTaGGTAGCTAAGATGACAGGC +
Preference number: 2 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLPTSAS*VAKMTG
Trigger: GCCTGTCATCTTAGCTACTCAGGAGGCTGAGGTGGG...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
3UTR-3UTR TCA 90 bp ACAAAGCGAGGAACACAGGGAGCCACACCAGCTGGTACCGTTGGAGGTGGTGGAAGGTTTAAGGTAAGGTaGCGGCCTTCATCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: TKRGTQGATPAGTVGGGGRFKVR*RPSSRE
Trigger: TTCCCTGGATGAAGGCCGTCACCTTACCTTAAACCT...TCCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR GCA 90 bp ATCTTGCTCTGTCGTCCACACAGGAGTATAGTGGCGCCATCTCGGCTCACTGCACTCAAGGTATCCTCCTaGCTTTGCCTCCCAAACTGC +
Preference number: 2 (lower is better)
Translates to: ILLCRPHRSIVAPSRLTALKVSS*LCLPNC
Trigger: GCAGTTTGGGAGGCAAAGGCAGGAGGATACCTTGAG...TGCAGTGAGCCGAGATGGCGCCACTATACTCCTGTGTGGACGACAGAGCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
3UTR-3UTR CCA 90 bp ACAAAGCGAGGAACACAGGGAGCCACACCAGCTGGTACCGTTGGAGGTGGTGGATGTCTGTGGGTACTGTaGGACTTCAAAGGGTATCTG +
Preference number: 2 (lower is better)
Translates to: TKRGTQGATPAGTVGGGGCLWVL*DFKGYL
Trigger: CAGATACCCTTTGAAGTCCCACAGTACCCACAGACA...TCCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR TCA 90 bp ATCTTGCTCTGTCGTCCACACAGGAGTATAGTGGCGCCATCTCGGCTCACTGCACTGGGAATACAGGCATaGGCCACTACACCTAGTTTG +
Preference number: 2 (lower is better)
Translates to: ILLCRPHRSIVAPSRLTALGIQA*ATTPSL
Trigger: CAAACTAGGTGTAGTGGCTCATGCCTGTATTCCCAG...TGCAGTGAGCCGAGATGGCGCCACTATACTCCTGTGTGGACGACAGAGCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
3UTR-3UTR CCA 90 bp CAGAAGGTACTGGAGGAACTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGACTCTGGAACGTTATTaGACCTCACAAAGCGAGGAA +
Preference number: 2 (lower is better)
Translates to: QKVLEELVHTAAEEEAGKTLERY*TSQSEE
Trigger: TTCCTCGCTTTGTGAGGTCCAATAACGTTCCAGAGT...CTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CCA 90 bp ATCTTGCTCTGTCGTCCACACAGGAGTATAGTGGCGCCATCTCGGCTCACTGCAATGTATGGAGTGCTATaGCAGCATGGTGAAGGATGC +
Preference number: 2 (lower is better)
Translates to: ILLCRPHRSIVAPSRLTAMYGVL*QHGEGC
Trigger: GCATCCTTCACCATGCTGCCATAGCACTCCATACAT...TGCAGTGAGCCGAGATGGCGCCACTATACTCCTGTGTGGACGACAGAGCAAGAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
3UTR CAA 90 bp AGGTTGCCAGCACTGACAGATGTGGTGATGGGGAGGCAACTTGCATaGCTAATAGACACTGGGAGTGGCTGGCTAAAGCAAGAAGTTACC +
Preference number: 2 (lower is better)
Translates to: RLPALTDVVMGRQLA*LIDTGSGWLKQEVT
Trigger: GGTAACTTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATCACCACATCTGTCAGTGCTGGCAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR TCA 90 bp ATCTTGCTCTGTCGTCCACACAGGAGTATAGTGGCGCCATCTCGGCTCACTGCATGGATAAAAAGCCACTaGAGCAGTAAAACCAACTGG +
Preference number: 2 (lower is better)
Translates to: ILLCRPHRSIVAPSRLTAWIKSH*SSKTNW
Trigger: CCAGTTGGTTTTACTGCTTCAGTGGCTTTTTATCCA...TGCAGTGAGCCGAGATGGCGCCACTATACTCCTGTGTGGACGACAGAGCAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335387.9
3UTR-3UTR CCA 90 bp ACATTAGAGGGCCCAGCTGAGGTAGCTGCTACATTACTTACAGGAGTCTTGGGTTCCACTTCTGTTGCATaGCCAAAGCATTGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: TLEGPAEVAATLLTGVLGSTSVA*PKHWPL
Trigger: GAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGA...ACCCAAGACTCCTGTAAGTAATGTAGCAGCTACCTCAGCTGGGCCCTCTAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CCA 90 bp CTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGGAGAAGAATTCATTCGATATTGCTAATAGACACTaGGAGTGGCTGGCTAAAGCA +
Preference number: 2 (lower is better)
Translates to: LVHTAAEEEAGKEKNSFDIANRH*EWLAKA
Trigger: TGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAAT...ATCGAATGAATTCTTCTCCTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CCA 90 bp CAAGAGGTGCTTTCTGAGTGTGGTACTGTGCCCACTGATCTGGCTTTCTTCTTATGGGAGGGAGGACTCTaGAACGTTATTGGACCTCAC +
Preference number: 2 (lower is better)
Translates to: QEVLSECGTVPTDLAFFLWEGGL*NVIGPH
Trigger: GTGAGGTCCAATAACGTTCCAGAGTCCTCCCTCCCA...TAAGAAGAAAGCCAGATCAGTGGGCACAGTACCACACTCAGAAAGCACCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CCA 90 bp CAAGAGGTGCTTTCTGAGTGTGGTACTGTGCCCACTGATCTGGCTTTCTTCTTAAGGCACAGTTGTCCTTaGCTCACTTGGTGGCTGACA +
Preference number: 2 (lower is better)
Translates to: QEVLSECGTVPTDLAFFLRHSCP*LTWWLT
Trigger: TGTCAGCCACCAAGTGAGCCAAGGACAACTGTGCCT...TAAGAAGAAAGCCAGATCAGTGGGCACAGTACCACACTCAGAAAGCACCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR TCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTCCTTGGGTTATAAAGTaGGGCCTAATTCTCGACAGG +
Preference number: 2 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSPWVIK*GLILDR
Trigger: CCTGTCGAGAATTAGGCCTCACTTTATAACCCAAGG...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR GCA 90 bp ATCTTGCTCTGTCGTCCACACAGGAGTATAGTGGCGCCATCTCGGCTCACTGCAAGGCGTATGCCACTATaGTCAGCCAATTTTGTTTAT +
Preference number: 2 (lower is better)
Translates to: ILLCRPHRSIVAPSRLTARRMPL*SANFVY
Trigger: ATAAACAAAATTGGCTGAGCATAGTGGCATACGCCT...TGCAGTGAGCCGAGATGGCGCCACTATACTCCTGTGTGGACGACAGAGCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
3UTR-3UTR TCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTAGGAGTTACAGTAAGTaGTCCCATCAAGCCTCTTCA +
Preference number: 2 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSRSYSK*SHQASS
Trigger: TGAAGAGGCTTGATGGGATCACTTACTGTAACTCCT...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR GCA 90 bp CAAGAGGTGCTTTCTGAGTGTGGTACTGTGCCCACTGATCTGGCTTTCTTCTTAGAATTCCACTTCTGTTaGATGGCCAAAGCATTGGCC +
Preference number: 2 (lower is better)
Translates to: QEVLSECGTVPTDLAFFLEFHFC*MAKALA
Trigger: GGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTC...TAAGAAGAAAGCCAGATCAGTGGGCACAGTACCACACTCAGAAAGCACCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR GCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACGATGGGGAGGCAACTTaGATTGCTAATAGACACTGG +
Preference number: 2 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHDGEAT*IANRHW
Trigger: CCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATC...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR GCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACATGATGTGGCCTCGTTaGCATATGAACTCCACCTTG +
Preference number: 2 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHMMWPR*HMNSTL
Trigger: CAAGGTGGAGTTCATATGGCAACGAGGCCACATCAT...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CCA 90 bp ATCTTGCTCTGTCGTCCACACAGGAGTATAGTGGCGCCATCTCGGCTCACTGCAAACAAAGTATACAAATaGCAGAGTAGAGCTAGAGGA +
Preference number: 2 (lower is better)
Translates to: ILLCRPHRSIVAPSRLTANKVYK*QSRARG
Trigger: TCCTCTAGCTCTACTCTGCCATTTGTATACTTTGTT...TGCAGTGAGCCGAGATGGCGCCACTATACTCCTGTGTGGACGACAGAGCAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
3UTR-3UTR CCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACTCTGCTCCTCGCAACTaGTCTTCAAATGACCACAAG +
Preference number: 2 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHSAPRN*SSNDHK
Trigger: CTTGTGGTCATTTGAAGACCAGTTGCGAGGAGCAGA...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CAA 90 bp GACCACAAGGTTCCCTTGGTAAAGGCACAGTTGTCCTTGGCTCACTaGGTGGCTGACAAGCCACCGAATAATATCCATCTAATGAGTTAT +
Preference number: 2 (lower is better)
Translates to: DHKVPLVKAQLSLAH*VADKPPNNIHLMSY
Trigger: ATAACTCATTAGATGGATATTATTCGGTGGCTTGTCAGCCACCAAGTGAGCCAAGGACAACTGTGCCTTTACCAAGGGAACCTTGTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CCA 90 bp GCATACATTCCAGAAGGTACTGGAGGAACTGGTCCATACGGCTGCGGAGGAGGAAATTCCAATCATTTCTaGAAAGTGAACATGTTACCC +
Preference number: 2 (lower is better)
Translates to: AYIPEGTGGTGPYGCGGGNSNHF*KVNMLP
Trigger: GGGTAACATGTTCACTTTCCAGAAATGATTGGAATT...TCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTGGAATGTATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR TCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTAAATGGGATACTCCTTaGGCATGTTCTTTTGTGTTC +
Preference number: 2 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSKWDTP*ACSFVF
Trigger: GAACACAAAAGAACATGCTCAAGGAGTATCCCATTT...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR GCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTATACTGGTGACAGTCTaGTCCAAAAATGACTCAAAG +
Preference number: 2 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSILVTV*SKNDSK
Trigger: CTTTGAGTCATTTTTGGAGCAGACTGTCACCAGTAT...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR GCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACGAAGAAGTAATGAGTTaGTCTTGGCCTGCTGAAGTT +
Preference number: 2 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHEEVMS*SWPAEV
Trigger: AACTTCAGCAGGCCAAGAGCAACTCATTACTTCTTC...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR GCA 90 bp ACAGCATTTGAATTAGCAATGACATCTTTGGGCTCTGAATCAATGGCATTTATAGGCGCCAGATGCGCCTaGTGTCGTACACAGGAGCAT +
Preference number: 2 (lower is better)
Translates to: TAFELAMTSLGSESMAFIGARCA*CRTQEH
Trigger: ATGCTCCTGTGTACGACAGCAGGCGCATCTGGCGCC...TATAAATGCCATTGATTCAGAGCCCAAAGATGTCATTGCTAATTCAAATGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTACTGAATGCGGCACATaGATTTCAGAATGGAACTTA +
Preference number: 2 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSTECGT*ISEWNL
Trigger: TAAGTTCCATTCTGAAATCCATGTGCCGCATTCAGT...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTAAAAATCAGTGCCACTaGCCTAATGAACTCCCTTTT +
Preference number: 2 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSKNQCH*PNELPF
Trigger: AAAAGGGAGTTCATTAGGCCAGTGGCACTGATTTTT...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACATAGTATCCTGTCTGTaGGTACTGTGGGACTTCAAA +
Preference number: 2 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHIVSCL*VLWDFK
Trigger: TTTGAAGTCCCACAGTACCCACAGACAGGATACTAT...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CAA 90 bp TTAGAGGGCCCAGCTGAGGTAGCTGCTACATTACTTACAGGAGTCTaGGGTGGAGAACCAATTTTATTTTCAGTTACAGAATCTGCAGAG +
Preference number: 2 (lower is better)
Translates to: LEGPAEVAATLLTGV*GGEPILFSVTESAE
Trigger: CTCTGCAGATTCTGTAACTGAAAATAAAATTGGTTCTCCACCCAAGACTCCTGTAAGTAATGTAGCAGCTACCTCAGCTGGGCCCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR TCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTCACAAATCTGATGCATaGCTTGTTGAACACATTGTA +
Preference number: 2 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSHKSDA*LVEHIV
Trigger: TACAATGTGTTCAACAAGTCATGCATCAGATTTGTG...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR TCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGACACAACTTTCATGTATaGCACTGGTTTATCACATGG +
Preference number: 2 (lower is better)
Translates to: LICGLDALYSLASKGIQGHNFHV*HWFITW
Trigger: CCATGTGATAAACCAGTGTCATACATGAAAGTTGTG...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR TCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGAAGTTATCAATACTGGTaGCAGTCTGCTCCAAAAATG +
Preference number: 2 (lower is better)
Translates to: LICGLDALYSLASKGIQGSYQYW*QSAPKM
Trigger: CATTTTTGGAGCAGACTGTCACCAGTATTGATAACT...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR GCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGACTTCCAGGAAACCAATaGATAGTTGCAATGCAACTT +
Preference number: 2 (lower is better)
Translates to: LICGLDALYSLASKGIQGLPGNQ*IVAMQL
Trigger: AAGTTGCATTGCAACTATGCATTGGTTTCCTGGAAG...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGCAACCCTCCCGCCCCTaGAAATGTGCACAAAACTTT +
Preference number: 2 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQQPSRP*KCAQNF
Trigger: AAAGTTTTGTGCACATTTCCAGGGGCGGGAGGGTTG...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR CAA 90 bp CTGTGGGTACTGTGGGACTTCAAAGGGTATCTGAGTCCTTGGATCTaGAAAATACTGAATGTTTTCAGAATGCGGAGGATATACTGGTAC +
Preference number: 2 (lower is better)
Translates to: LWVLWDFKGYLSPWI*KILNVFRMRRIYWY
Trigger: GTACCAGTATATCCTCCGCATTCTGAAAACATTCAGTATTTTCAAGATCCAAGGACTCAGATACCCTTTGAAGTCCCACAGTACCCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR TCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACTTTTCTCAAGAAAGCTaGAAGCACCTGATTCTTTTG +
Preference number: 2 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHFSQES*KHLILL
Trigger: CAAAAGAATCAGGTGCTTTCAGCTTTCTTGAGAAAA...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR-3UTR TCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTAGAGGGTTCTTTCCCTaGGGGCACATAAGGAGCTCT +
Preference number: 2 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSRGFFP*GHIRSS
Trigger: AGAGCTCCTTATGTGCCCTCAGGGAAAGAACCCTCT...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR TCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATACATTAAGCCCACCATaGCAGACAGAAGGTGACCAC +
Preference number: 2 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHTLSPP*QTEGDH
Trigger: GTGGTCACCTTCTGTCTGTCATGGTGGGCTTAATGT...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR TCA 90 bp CACCAAAATGCACTCAGTAATGGTATAACCAAGATGCAGCAGCAGAAAACAAATAGGTTTAAGGTAAGGTaGCGGCCTTCATCCAGGGAA +
Preference number: 2 (lower is better)
Translates to: HQNALSNGITKMQQQKTNRFKVR*RPSSRE
Trigger: TTCCCTGGATGAAGGCCGTCACCTTACCTTAAACCT...ATTTGTTTTCTGCTGCTGCATCTTGGTTATACCATTACTGAGTGCATTTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398671.2
3UTR-3UTR TCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTACAAGAGGTGCTTTCTaGGTGTGGTACTGTGCCCAC +
Preference number: 2 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSTRGAF*VWYCAH
Trigger: GTGGGCACAGTACCACACTCAGAAAGCACCTCTTGT...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATCAACCCTCCCGCCCCTaGAAATGTGCACAAAACTTT +
Preference number: 2 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHQPSRP*KCAQNF
Trigger: AAAGTTTTGTGCACATTTCCAGGGGCGGGAGGGTTG...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CCA 90 bp CAAGAGGTGCTTTCTGAGTGTGGTACTGTGCCCACTGATCTGGCTTTCTTCTTATACTTACAGGAGTCTTaGGTGGAGAACCAATTTTAT +
Preference number: 2 (lower is better)
Translates to: QEVLSECGTVPTDLAFFLYLQES*VENQFY
Trigger: ATAAAATTGGTTCTCCACCCAAGACTCCTGTAAGTA...TAAGAAGAAAGCCAGATCAGTGGGCACAGTACCACACTCAGAAAGCACCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CAA 90 bp ATCCTGTCTGTGGGTACTGTGGGACTTCAAAGGGTATCTGAGTCCTaGGATCTTGAAAATACTGAATGTTTTCAGAATGCGGAGGATATA +
Preference number: 2 (lower is better)
Translates to: ILSVGTVGLQRVSES*DLENTECFQNAEDI
Trigger: TATATCCTCCGCATTCTGAAAACATTCAGTATTTTCAAGATCCAAGGACTCAGATACCCTTTGAAGTCCCACAGTACCCACAGACAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR TCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAAAAGCTGAAAGCACCTaGTTCTTTTGCCAAGTCATC +
Preference number: 2 (lower is better)
Translates to: DISRYHSEEGSDELPFLRKAEST*FFCQVI
Trigger: GATGACTTGGCAAAAGAATCAGGTGCTTTCAGCTTT...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR GCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGACATCTTGTTAGTCAGTaGAAACGCTACATACAGGGT +
Preference number: 2 (lower is better)
Translates to: DISRYHSEEGSDELPFLRHLVSQ*KRYIQG
Trigger: ACCCTGTATGTAGCGTTTGCACTGACTAACAAGATG...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR GCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAATCACCAGGAAGGAATaGCCAGCTCTTCTTTTCAAA +
Preference number: 2 (lower is better)
Translates to: DISRYHSEEGSDELPFLRITRKE*PALLFK
Trigger: TTTGAAAAGAAGAGCTGGGCATTCCTTCCTGGTGAT...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR GCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCAAGGATCAGATGAACTaGCCTTTCTTCGAAAGTGGC +
Preference number: 2 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCKDQMN*PFFESG
Trigger: GCCACTTTCGAAGAAAGGGCAGTTCATCTGATCCTT...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CCA 90 bp AGAGTAGAGCTAGAGGATAAAATCAGGATGAGATTCTGTGATGTACTGAGGAACCGGGTTGGAATACAGTaGTATAATCTCAGTTCACGG +
Preference number: 2 (lower is better)
Translates to: RVELEDKIRMRFCDVLRNRVGIQ*YNLSSR
Trigger: CCGTGAACTGAGATTATACCACTGTATTCCAACCCG...GTTCCTCAGTACATCACAGAATCTCATCCTGATTTTATCCTCTAGCTCTACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
3UTR-3UTR CCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGAGAGTCCACAGGAAATaGATGCCCCCAGTAATATCT +
Preference number: 2 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQRVHRK*MPPVIS
Trigger: AGATATTACTGGGGGCATCCATTTCCTGTGGACTCT...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CCA 90 bp ACAGCATTTGAATTAGCAATGACATCTTTGGGCTCTGAATCAATGGCATTTATACCTTGGCTCACTTGGTaGCTGACAAGCCACCGAATA +
Preference number: 2 (lower is better)
Translates to: TAFELAMTSLGSESMAFIPWLTW*LTSHRI
Trigger: TATTCGGTGGCTTGTCAGCCACCAAGTGAGCCAAGG...TATAAATGCCATTGATTCAGAGCCCAAAGATGTCATTGCTAATTCAAATGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR TCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCAAAGCTGAAAGCACCTaGTTCTTTTGCCAAGTCATC +
Preference number: 2 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCKAEST*FFCQVI
Trigger: GATGACTTGGCAAAAGAATCAGGTGCTTTCAGCTTT...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCGCAGCTGGAATGAGATaGAAACTTCTCTCAGTGAAA +
Preference number: 2 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCAAGMR*KLLSVK
Trigger: TTTCACTGAGAGAAGTTTCCATCTCATTCCAGCTGC...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCGGAGTTATTGTTTTATaGGATCACCTGCTGCAAGAC +
Preference number: 2 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCGVIVL*DHLLQD
Trigger: GTCTTGCAGCAGGTGATCCCATAAAACAATAACTCC...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAACCCTTTCTTCGAAAGTaGCAGAGAACCAATGGCTTT +
Preference number: 2 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKPFLRK*QRTNGF
Trigger: AAAGCCATTGGTTCTCTGCCACTTTCGAAGAAAGGG...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR CAA 90 bp TCTTCAATTTATCCAGAAAATGGGATACTCCTTGAGCATGTTCTTTaGTGTTCTGCTTGCAGAAGGGGTCCTTATGTAGAAGGAGTTACA +
Preference number: 2 (lower is better)
Translates to: SSIYPENGILLEHVL*CSACRRGPYVEGVT
Trigger: TGTAACTCCTTCTACATAAGGACCCCTTCTGCAAGCAGAACACAAAAGAACATGCTCAAGGAGTATCCCATTTTCTGGATAAATTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR TCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAATGACAGACAGAAGGTaGCCACTACATAGAGAATGG +
Preference number: 2 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPMTDRR*PLHREW
Trigger: CCATTCTCTATGTAGTGGTCACCTTCTGTCTGTCAT...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR TCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAAGGTAAAAAGGCCAAATaGCGGGAAATGCCTCAATTT +
Preference number: 2 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKGKKAK*REMPQF
Trigger: AAATTGAGGCATTTCCCGTCATTTGGCCTTTTTACC...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR TCA 90 bp ACAGCATTTGAATTAGCAATGACATCTTTGGGCTCTGAATCAATGGCATTTATACAACTGGTCTTCAAATaGCCACAAGGTTCCCTTGGT +
Preference number: 2 (lower is better)
Translates to: TAFELAMTSLGSESMAFIQLVFK*PQGSLG
Trigger: ACCAAGGGAACCTTGTGGTCATTTGAAGACCAGTTG...TATAAATGCCATTGATTCAGAGCCCAAAGATGTCATTGCTAATTCAAATGCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR GCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGGTTACTGCACCGGATTaGTACAAACTCATAAAAAGC +
Preference number: 2 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQVTAPD*YKLIKS
Trigger: GCTTTTTATGAGTTTGTAGCAATCCGGTGCAGTAAC...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR GCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAGGAAGGAAAAATCAGTaGCACTGGCCTAATGAACTC +
Preference number: 2 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPGRKNQ*HWPNEL
Trigger: GAGTTCATTAGGCCAGTGGCACTGATTTTTCCTTCC...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR GCA 90 bp AATACATTAAGCATGAAGCCGAAAGGTTCAGTTTCTTTACCTCTCCATTTCTTAGAATTCCACTTCTGTTaGATGGCCAAAGCATTGGCC +
Preference number: 2 (lower is better)
Translates to: NTLSMKPKGSVSLPLHFLEFHFC*MAKALA
Trigger: GGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTC...TAAGAAATGGAGAGGTAAAGAAACTGAACCTTTCGGCTTCATGCTTAATGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398671.2
3UTR-3UTR CCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTAATTCCAATCATTTCTaGAAAGTGAACATGTTACCC +
Preference number: 2 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFNSNHF*KVNMLP
Trigger: GGGTAACATGTTCACTTTCCAGAAATGATTGGAATT...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR-3UTR CCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAAGGAGTTATTGTTTTATaGGATCACCTGCTGCAAGAC +
Preference number: 2 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKGVIVL*DHLLQD
Trigger: GTCTTGCAGCAGGTGATCCCATAAAACAATAACTCC...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCACCCTTTCTTCGAAAGTaGCAGAGAACCAATGGCTTT +
Preference number: 2 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPPFLRK*QRTNGF
Trigger: AAAGCCATTGGTTCTCTGCCACTTTCGAAGAAAGGG...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR CAA 90 bp GGCTCAGTTACTGCACCGGATTGCTACAAACTCATAAAAAGCTGCTaGAAGCTTAAGTTAAATGTTGTCCAAATTCCAATCATTTCTGGA +
Preference number: 2 (lower is better)
Translates to: GSVTAPDCYKLIKSC*KLKLNVVQIPIISG
Trigger: TCCAGAAATGATTGGAATTTGGACAACATTTAACTTAAGCTTCAAGCAGCTTTTTATGAGTTTGTAGCAATCCGGTGCAGTAACTGAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR-3UTR TCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCCACAAATCTGATGCATaGCTTGTTGAACACATTGTA +
Preference number: 2 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCHKSDA*LVEHIV
Trigger: TACAATGTGTTCAACAAGTCATGCATCAGATTTGTG...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR TCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGTTATCAGTCACCTTATaGGCATGTTCATTAAGACAG +
Preference number: 2 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQLSVTL*ACSLRQ
Trigger: CTGTCTTAATGAACATGCTCATAAGGTGACTGATAA...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR GCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTAAATGGCTCAGTTACTaGACCGGATTGCTACAAACT +
Preference number: 2 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSKWLSY*TGLLQT
Trigger: AGTTTGTAGCAATCCGGTGCAGTAACTGAGCCATTT...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR-3UTR GCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAACATCTTGTTAGTCAGTaGAAACGCTACATACAGGGT +
Preference number: 2 (lower is better)
Translates to: YFQMPSQNHFSHILARQKHLVSQ*KRYIQG
Trigger: ACCCTGTATGTAGCGTTTGCACTGACTAACAAGATG...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR-3UTR GCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTATCACCAGGAAGGAATaGCCAGCTCTTCTTTTCAAA +
Preference number: 2 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSITRKE*PALLFK
Trigger: TTTGAAAAGAAGAGCTGGGCATTCCTTCCTGGTGAT...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR-3UTR GCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAACCACAGTAACTGAATaGGGCACATGGATTTCAGAA +
Preference number: 2 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPTTVTE*GTWISE
Trigger: TTCTGAAATCCATGTGCCGCATTCAGTTACTGTGGT...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR GCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTACCACAGTAACTGAATaGGGCACATGGATTTCAGAA +
Preference number: 2 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSTTVTE*GTWISE
Trigger: TTCTGAAATCCATGTGCCGCATTCAGTTACTGTGGT...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR GCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAAAAGGCAAGGGAATCTaGTTTGTTCAGGTACCAACT +
Preference number: 2 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPKGKGI*FVQVPT
Trigger: AGTTGGTACCTGAACAAAGCAGATTCCCTTGCCTTT...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR GCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCACTTTTGTGTTCTGCTTaGAGAAGGGGTCCTTATGTA +
Preference number: 2 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPLLCSA*RRGPYV
Trigger: TACATAAGGACCCCTTCTGCAAGCAGAACACAAAAG...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTAGAGTCCACAGGAAATaGATGCCCCCAGTAATATCT +
Preference number: 2 (lower is better)
Translates to: HREWMQHRIISTQKQFLCRVHRK*MPPVIS
Trigger: AGATATTACTGGGGGCATCCATTTCCTGTGGACTCT...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGCAGCTGGAATGAGATaGAAACTTCTCTCAGTGAAA +
Preference number: 2 (lower is better)
Translates to: YFQMPSQNHFSHILARQKAAGMR*KLLSVK
Trigger: TTTCACTGAGAGAAGTTTCCATCTCATTCCAGCTGC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR-3UTR CCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGTGGCAGAGAACCAATaGCTTTACTTCACATTAAGC +
Preference number: 2 (lower is better)
Translates to: YFQMPSQNHFSHILARQKVAENQ*LYFTLS
Trigger: GCTTAATGTGAAGTAAAGCCATTGGTTCTCTGCCAC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAATGGGCTCTGAATCAATaGCATTTATACAGGAGCCTA +
Preference number: 2 (lower is better)
Translates to: YFQMPSQNHFSHILARQKWALNQ*HLYRSL
Trigger: TAGGCTCCTGTATAAATGCCATTGATTCAGAGCCCA...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR GCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAGTTACTGCACCGGATTaGTACAAACTCATAAAAAGC +
Preference number: 2 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPVTAPD*YKLIKS
Trigger: GCTTTTTATGAGTTTGTAGCAATCCGGTGCAGTAAC...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR GCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTAAGTCAAGGCTACTGTaGTGTTGTTATGCTACAAAC +
Preference number: 2 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSKSRLL*CCYATN
Trigger: GTTTGTAGCATAACAACAGCACAGTAGCCTTGACTT...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR-3UTR GCA 90 bp AATACATTAAGCATGAAGCCGAAAGGTTCAGTTTCTTTACCTCTCCATTTCTTAGAAGAAGTAATGAGTTaGTCTTGGCCTGCTGAAGTT +
Preference number: 2 (lower is better)
Translates to: NTLSMKPKGSVSLPLHFLEEVMS*SWPAEV
Trigger: AACTTCAGCAGGCCAAGAGCAACTCATTACTTCTTC...TAAGAAATGGAGAGGTAAAGAAACTGAACCTTTCGGCTTCATGCTTAATGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398671.2
3UTR-3UTR CCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCGTAACATATGCAGTTTaGTTACCCACATTACACATT +
Preference number: 2 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCVTYAV*LPTLHI
Trigger: AATGTGTAATGTGGGTAACCAAACTGCATATGTTAC...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR CAA 90 bp TTAGGTTTCAGTACAATACCTCCCACAAATCTGATGCATGACTTGTaGAACACATTGTATACTTTCAGATGCCAAGTCAAAACCATTTCA +
Preference number: 2 (lower is better)
Translates to: LGFSTIPPTNLMHDL*NTLYTFRCQVKTIS
Trigger: TGAAATGGTTTTGACTTGGCATCTGAAAGTATACAATGTGTTCAACAAGTCATGCATCAGATTTGTGGGAGGTATTGTACTGAAACCTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR-3UTR GCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCATTTTATGGGATCACCTaGTGCAAGACAAGCATTATT +
Preference number: 2 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPFYGIT*CKTSII
Trigger: AATAATGCTTGTCTTGCAGCAGGTGATCCCATAAAA...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR GCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAAACAATAGGTAACATATaGAGTTTGGTTACCCACATT +
Preference number: 2 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKTIGNI*SLVTHI
Trigger: AATGTGGGTAACCAAACTGCATATGTTACCTATTGT...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTCCACTACATAGAGAATaGATGCAACACAGAATAATC +
Preference number: 2 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSPLHRE*MQHRII
Trigger: GATTATTCTGTGTTGCATCCATTCTCTATGTAGTGG...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR CAA 90 bp AATTTAGGTTTCAGTACAATACCTCCCACAAATCTGATGCATGACTaGTTGAACACATTGTATACTTTCAGATGCCAAGTCAAAACCATT +
Preference number: 2 (lower is better)
Translates to: NLGFSTIPPTNLMHD*LNTLYTFRCQVKTI
Trigger: AATGGTTTTGACTTGGCATCTGAAAGTATACAATGTGTTCAACAAGTCATGCATCAGATTTGTGGGAGGTATTGTACTGAAACCTAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR-3UTR TCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTTTTTCTCAAGAAAGCTaGAAGCACCTGATTCTTTTG +
Preference number: 2 (lower is better)
Translates to: HREWMQHRIISTQKQFLCFSQES*KHLILL
Trigger: CAAAAGAATCAGGTGCTTTCAGCTTTCTTGAGAAAA...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR TCA 90 bp ACAGCATTTGAATTAGCAATGACATCTTTGGGCTCTGAATCAATGGCATTTATACACAAATTTGAAAGATaGACCTCCTTTCAGCTGTTA +
Preference number: 2 (lower is better)
Translates to: TAFELAMTSLGSESMAFIHKFER*TSFQLL
Trigger: TAACAGCTGAAAGGAGGTTCATCTTTCAAATTTGTG...TATAAATGCCATTGATTCAGAGCCCAAAGATGTCATTGCTAATTCAAATGCTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR GCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAACAATAGGTAACATATaGAGTTTGGTTACCCACATT +
Preference number: 2 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPTIGNI*SLVTHI
Trigger: AATGTGGGTAACCAAACTGCATATGTTACCTATTGT...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAAATTCCAATCATTTCTaGAAAGTGAACATGTTACCC +
Preference number: 2 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPNSNHF*KVNMLP
Trigger: GGGTAACATGTTCACTTTCCAGAAATGATTGGAATT...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGTAACATATGCAGTTTaGTTACCCACATTACACATT +
Preference number: 2 (lower is better)
Translates to: YFQMPSQNHFSHILARQKVTYAV*LPTLHI
Trigger: AATGTGTAATGTGGGTAACCAAACTGCATATGTTAC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR CCA 72 bp AACACAGGGAGCCACACCAGCTGGTACCGTTGGAGGTaGTGGATAGTATCCTGTCTGTGGGTACTGTGGGAC +
Preference number: 3 (lower is better)
Translates to: NTGSHTSWYRWR*WIVSCLWVLWD
Trigger: GTCCCACAGTACCCACAGACAGGATACTATCCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCCTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 72 bp CCTCACAAAGCGAGGAACACAGGGAGCCACACCAGCTaGTACCGTTGGAGGTGGTGGATAGTATCCTGTCTG +
Preference number: 3 (lower is better)
Translates to: PHKARNTGSHTS*YRWRWWIVSCL
Trigger: CAGACAGGATACTATCCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 72 bp GCTGTCGTACACAGGAGCATACATTCCAGAAGGTACTaGAGGAACTGGTCCATACGGCTGCGGAGGAGGAGG +
Preference number: 3 (lower is better)
Translates to: AVVHRSIHSRRY*RNWSIRLRRRR
Trigger: CCTCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTGGAATGTATGCTCCTGTGTACGACAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 72 bp GGCATATGGCATGGAAGCAGGTGGGAGGGAGGACTCTaGAACGTTATTGGACCTCACAAAGCGAGGAACACA +
Preference number: 3 (lower is better)
Translates to: GIWHGSRWEGGL*NVIGPHKARNT
Trigger: TGTGTTCCTCGCTTTGTGAGGTCCAATAACGTTCCAGAGTCCTCCCTCCCACCTGCTTCCATGCCATATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CAA 90 bp GCATACATTCCAGAAGGTACTGGAGGAACTGGTCCATACGGCTGCGGAGGAGGAGGGAGGCAACTTGCATaGCTAATAGACACTGGGAGT +
Preference number: 3 (lower is better)
Translates to: AYIPEGTGGTGPYGCGGGGRQLA*LIDTGS
Trigger: ACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCC...TCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTGGAATGTATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 72 bp CACTTCCTTGGGAAGCAGTGGCCTGGACAGGATCTGTaGTATGGTAACCTGTACGGGAAGATCTGGAAATCG +
Preference number: 3 (lower is better)
Translates to: HFLGKQWPGQDL*YGNLYGKIWKS
Trigger: CGATTTCCAGATCTTCCCGTACAGGTTACCATACCACAGATCCTGTCCAGGCCACTGCTTCCCAAGGAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 72 bp GGTGATGGGGAGGCAACTTGCATTGCTAATAGACACTaGGAGTGGCTGGCTAAAGCAAGAAGTTACCGGCAG +
Preference number: 3 (lower is better)
Translates to: GDGEATCIANRH*EWLAKARSYRQ
Trigger: CTGCCGGTAACTTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CAA 90 bp ACAAAGCGAGGAACACAGGGAGCCACACCAGCTGGTACCGTTGGAGGTGGTGGATTACTTACAGGAGTCTaGGGTGGAGAACCAATTTTA +
Preference number: 3 (lower is better)
Translates to: TKRGTQGATPAGTVGGGGLLTGV*GGEPIL
Trigger: TAAAATTGGTTCTCCACCCAAGACTCCTGTAAGTAA...TCCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR TCA 72 bp TCAGTTACAGAATCTGCAGAGGGCCCAGCAGCATTCTaGCCATTAGCGCCAACCTTTCCCACTTTCTTCACG +
Preference number: 3 (lower is better)
Translates to: SVTESAEGPAAF*PLAPTFPTFFT
Trigger: CGTGAAGAAAGTGGGAAAGGTTGGCGCTAATGGTCAGAATGCTGCTGGGCCCTCTGCAGATTCTGTAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 72 bp ATTGCTTCTAATAATGTCATCTCGTTGGTACATAGGTaGGCGCCAGATGCGCCTGCTGTCGTACACAGGAGC +
Preference number: 3 (lower is better)
Translates to: IASNNVISLVHR*APDAPAVVHRS
Trigger: GCTCCTGTGTACGACAGCAGGCGCATCTGGCGCCCACCTATGTACCAACGAGATGACATTATTAGAAGCAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CAA 90 bp ACATTAGAGGGCCCAGCTGAGGTAGCTGCTACATTACTTACAGGAGTCTTGGGTGGAATTCCACTTCTGTaGCATGGCCAAAGCATTGGC +
Preference number: 3 (lower is better)
Translates to: TLEGPAEVAATLLTGVLGGIPLL*HGQSIG
Trigger: GCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCC...ACCCAAGACTCCTGTAAGTAATGTAGCAGCTACCTCAGCTGGGCCCTCTAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 72 bp AGGTGCTTTCTGAGTGTGGTACTGTGCCCACTGATCTaGCTTTCTTCTTATCTGCTCCTCGCAACTGGTCTT +
Preference number: 3 (lower is better)
Translates to: RCFLSVVLCPLI*LSSYLLLATGL
Trigger: AAGACCAGTTGCGAGGAGCAGATAAGAAGAAAGCCAGATCAGTGGGCACAGTACCACACTCAGAAAGCACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 72 bp CCTAAACTCTGTTTCTTCTGCTTTGGTGGCTCCTTTTaGTGCTGCTGTACTGGATGCCCATTTTCCACTGCC +
Preference number: 3 (lower is better)
Translates to: PKLCFFCFGGSF*CCCTGCPFSTA
Trigger: GGCAGTGGAAAATGGGCATCCAGTACAGCAGCACCAAAAGGAGCCACCAAAGCAGAAGAAACAGAGTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 72 bp GGGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTaGCTGGCTAAAGCAAGAAGTTACCGGCAGAATTGT +
Preference number: 3 (lower is better)
Translates to: GEATCIANRHWE*LAKARSYRQNC
Trigger: ACAATTCTGCCGGTAACTTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR TCA 72 bp CTCCACTCAAATGTGGGGTGTTTTGATCTGTGGTCTTaGCGCCTTGTATTCCCTTGCCAGCAAAGGGATACA +
Preference number: 3 (lower is better)
Translates to: LHSNVGCFDLWS*RLVFPCQQRDT
Trigger: TGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAAAACACCCCACATTTGAGTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR TCA 72 bp AGAATTCAGCTCTGTTCCAACATTAGAGGGCCCAGCTaGGGTAGCTGCTACATTACTTACAGGAGTCTTGGG +
Preference number: 3 (lower is better)
Translates to: RIQLCSNIRGPS*GSCYITYRSLG
Trigger: CCCAAGACTCCTGTAAGTAATGTAGCAGCTACCTCAGCTGGGCCCTCTAATGTTGGAACAGAGCTGAATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR GCA 72 bp GGGTGGAGAACCAATTTTATTTTCAGTTACAGAATCTaGAGAGGGCCCAGCAGCATTCTGACCATTAGCGCC +
Preference number: 3 (lower is better)
Translates to: GWRTNFIFSYRI*RGPSSILTISA
Trigger: GGCGCTAATGGTCAGAATGCTGCTGGGCCCTCTGCAGATTCTGTAACTGAAAATAAAATTGGTTCTCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CCA 72 bp CCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTaGCCTCTCTCTGAAGAAGTAATGAGTTGCTCTTGG +
Preference number: 3 (lower is better)
Translates to: PGNSTSVAWPKH*PLSEEVMSCSW
Trigger: CCAAGAGCAACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
3UTR-3UTR CAA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTTTTTGTGTAGTTCTGTaGCACAGAGGGTTCTTTCCC +
Preference number: 3 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSFCVVL*HRGFFP
Trigger: GGGAAAGAACCCTCTGTGCAACAGAACTACACAAAA...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCATAGAACTAGTTCGATaGGGTACAAACAGCATCTTT +
Preference number: 3 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLIELVR*GTNSIF
Trigger: AAAGATGCTGTTTGTACCCAATCGAACTAGTTCTAT...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
3UTR-3UTR CAA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGACTAATGCAAGAGGGCTaGAAGTATCAAAGAGTCCAC +
Preference number: 3 (lower is better)
Translates to: LICGLDALYSLASKGIQGLMQEG*KYQRVH
Trigger: GTGGACTCTTTGATACTTCAAGCCCTCTTGCATTAG...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGATCCTGTTTAAGCATCTaGCTAGCAGGAAAAGCCCTT +
Preference number: 3 (lower is better)
Translates to: LICGLDALYSLASKGIQGSCLSI*LAGKAL
Trigger: AAGGGCTTTTCCTGCTAGCAAGATGCTTAAACAGGA...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCACGTGCTGAAGATGTTTaGTGTAGTTCTGTTGCACAG +
Preference number: 3 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSRAEDV*CSSVAQ
Trigger: CTGTGCAACAGAACTACACAAAACATCTTCAGCACG...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTGTTTTCAGAATGAGGTaGCCAGCACTGACAGATGTG +
Preference number: 3 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFVFRMR*PALTDV
Trigger: CACATCTGTCAGTGCTGGCAACCTCATTCTGAAAAC...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
3UTR TCA 72 bp TTTCTTCTTATCTGCTCCTCGCAACTGGTCTTCAAATaGCCACAAGGTTCCCTTGGTAAAGGCACAGTTGTC +
Preference number: 3 (lower is better)
Translates to: FLLICSSQLVFK*PQGSLGKGTVV
Trigger: GACAACTGTGCCTTTACCAAGGGAACCTTGTGGTCATTTGAAGACCAGTTGCGAGGAGCAGATAAGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR TCA 72 bp ACCTGTACGGGAAGATCTGGAAATCGCACCCCATTTTaGGATGATGGGTCCATCACTAAAGGGAATTATTGG +
Preference number: 3 (lower is better)
Translates to: TCTGRSGNRTPF*DDGSITKGNYW
Trigger: CCAATAATTCCCTTTAGTGATGGACCCATCATCTCAAAATGGGGTGCGATTTCCAGATCTTCCCGTACAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR GCA 72 bp TCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTaGCCTTTCTTCGAAAGTGGCAGAGAACCAATGGCT +
Preference number: 3 (lower is better)
Translates to: SVGTILKKDQMN*PFFESGREPMA
Trigger: AGCCATTGGTTCTCTGCCACTTTCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR GCA 72 bp TATGTGCAAATGACCTTGGCTTTTGGCAGTACTAAGTaGAGCCAGTGTCTGTGTTCCACTGGTTTGGGAATA +
Preference number: 3 (lower is better)
Translates to: YVQMTLAFGSTK*SQCLCSTGLGI
Trigger: TATTCCCAAACCAGTGGAACACAGACACTGGCTGCACTTAGTACTGCCAAAAGCCAAGGTCATTTGCACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR CCA 72 bp ACTGATCTGGCTTTCTTCTTATCTGCTCCTCGCAACTaGTCTTCAAATGACCACAAGGTTCCCTTGGTAAAG +
Preference number: 3 (lower is better)
Translates to: TDLAFFLSAPRN*SSNDHKVPLVK
Trigger: CTTTACCAAGGGAACCTTGTGGTCATTTGAAGACCAGTTGCGAGGAGCAGATAAGAAGAAAGCCAGATCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CAA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTCTAATGCAAGAGGGCTaGAAGTATCAAAGAGTCCAC +
Preference number: 3 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFLMQEG*KYQRVH
Trigger: GTGGACTCTTTGATACTTCAAGCCCTCTTGCATTAG...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000454740.5
ENST00000498479.5
3UTR-3UTR CAA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGACCCAGCAATACCATCTaGTTAGTCAGTGCAAACGCT +
Preference number: 3 (lower is better)
Translates to: DISRYHSEEGSDELPFLRPSNTI*LVSANA
Trigger: AGCGTTTGCACTGACTAACAAGATGGTATTGCTGGG...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTTCCTCTCTTGTTGCTTaGTATCCTTTGATTCCAAAT +
Preference number: 3 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSSSLVA*YPLIPN
Trigger: ATTTGGAATCAAAGGATACAAAGCAACAAGAGAGGA...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp ACAGCATTTGAATTAGCAATGACATCTTTGGGCTCTGAATCAATGGCATTTATATTGTCCTTGGCTCACTaGGTGGCTGACAAGCCACCG +
Preference number: 3 (lower is better)
Translates to: TAFELAMTSLGSESMAFILSLAH*VADKPP
Trigger: CGGTGGCTTGTCAGCCACCAAGTGAGCCAAGGACAA...TATAAATGCCATTGATTCAGAGCCCAAAGATGTCATTGCTAATTCAAATGCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR TCA 72 bp TTTTGTGTAGTTCTGTTGCACAGAGGGTTCTTTCCCTaGGGGCACATAAGGAGCTCTCAAACTGTTAATAGG +
Preference number: 3 (lower is better)
Translates to: FCVVLLHRGFFP*GHIRSSQTVNR
Trigger: CCTATTAACAGTTTGAGAGCTCCTTATGTGCCCTCAGGGAAAGAACCCTCTGTGCAACAGAACTACACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR TCA 72 bp GAGAATGCATGCACTTCCATGCCTTGGGTTATAAAGTaGGGCCTAATTCTCGACAGGTTGATGGAATATGTG +
Preference number: 3 (lower is better)
Translates to: ENACTSMPWVIK*GLILDRLMEYV
Trigger: CACATATTCCATCAACCTGTCGAGAATTAGGCCTCACTTTATAACCCAAGGCATGGAAGTGCATGCATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR GCA 72 bp GGGATACTCCTTGAGCATGTTCTTTTGTGTTCTGCTTaGAGAAGGGGTCCTTATGTAGAAGGAGTTACAGTA +
Preference number: 3 (lower is better)
Translates to: GILLEHVLLCSA*RRGPYVEGVTV
Trigger: TACTGTAACTCCTTCTACATAAGGACCCCTTCTGCAAGCAGAACACAAAAGAACATGCTCAAGGAGTATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR CCA 72 bp AGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTaGCTAAAGCAAGAAGTTACCGGCAGAATTGTTTTT +
Preference number: 3 (lower is better)
Translates to: RQLALLIDTGSG*LKQEVTGRIVF
Trigger: AAAAACAATTCTGCCGGTAACTTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CAA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGACTAATGCAAGAGGGCTaGAAGTATCAAAGAGTCCAC +
Preference number: 3 (lower is better)
Translates to: DISRYHSEEGSDELPFLRLMQEG*KYQRVH
Trigger: GTGGACTCTTTGATACTTCAAGCCCTCTTGCATTAG...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACCTGATGCATGACTTGTaGAACACATTGTATACTTTC +
Preference number: 3 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHLMHDL*NTLYTF
Trigger: GAAAGTATACAATGTGTTCAACAAGTCATGCATCAG...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR-3UTR CAA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGAGACATACCAATAAGGTaGGCAGGTATATACATATAC +
Preference number: 3 (lower is better)
Translates to: LICGLDALYSLASKGIQGDIPIR*AGIYIY
Trigger: GTATATGTATATACCTGCCAACCTTATTGGTATGTC...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp CACCAAAATGCACTCAGTAATGGTATAACCAAGATGCAGCAGCAGAAAACAAATGGAATTCCACTTCTGTaGCATGGCCAAAGCATTGGC +
Preference number: 3 (lower is better)
Translates to: HQNALSNGITKMQQQKTNGIPLL*HGQSIG
Trigger: GCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCC...ATTTGTTTTCTGCTGCTGCATCTTGGTTATACCATTACTGAGTGCATTTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398671.2
3UTR TCA 72 bp AGTTCAATTTCCTTGCTTAAAAGGTTTAAGGTAAGGTaGCGGCCTTCATCCAGGGAATTCCACTTCTGTTGC +
Preference number: 3 (lower is better)
Translates to: SSISLLKRFKVR*RPSSREFHFCC
Trigger: GCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCACCTTACCTTAAACCTTTTAAGCAAGGAAATTGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
3UTR GCA 72 bp ACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTaGAGTACAAATAAAAGCCACATGTGTTGTATCACA +
Preference number: 3 (lower is better)
Translates to: TTILPSGCTVDM*STNKSHMCCIT
Trigger: TGTGATACAACACATGTGGCTTTTATTTGTACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR GCA 72 bp TATGCAATAAACAGTATAAATGCAGACAGCAGTTGCTaGAAGCTAACCACGATACTCCCAAGTGGCTGTACA +
Preference number: 3 (lower is better)
Translates to: YAINSINADSSC*KLTTILPSGCT
Trigger: TGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCAACTGCTGTCTGCATTTATACTGTTTATTGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR GCA 72 bp GAATATGCAATAAACAGTATAAATGCAGACAGCAGTTaGTGCAAGCTAACCACGATACTCCCAAGTGGCTGT +
Preference number: 3 (lower is better)
Translates to: EYAINSINADSS*CKLTTILPSGC
Trigger: ACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCAACTGCTGTCTGCATTTATACTGTTTATTGCATATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCATGTGGTCTTGACGCCTaGTATTCCCTTGCCAGCAAA +
Preference number: 3 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPCGLDA*YSLASK
Trigger: TTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACA...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp ACAGCATTTGAATTAGCAATGACATCTTTGGGCTCTGAATCAATGGCATTTATAGACCACAAGGTTCCCTaGGTAAAGGCACAGTTGTCC +
Preference number: 3 (lower is better)
Translates to: TAFELAMTSLGSESMAFIDHKVP*VKAQLS
Trigger: GGACAACTGTGCCTTTACCAAGGGAACCTTGTGGTC...TATAAATGCCATTGATTCAGAGCCCAAAGATGTCATTGCTAATTCAAATGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR TCA 72 bp TTACTTCACATTAAGCCCACCATGACAGACAGAAGGTaGCCACTACATAGAGAATGGATGCAACACAGAATA +
Preference number: 3 (lower is better)
Translates to: LLHIKPTMTDRR*PLHREWMQHRI
Trigger: TATTCTGTGTTGCATCCATTCTCTATGTAGTGGTCACCTTCTGTCTGTCATGGTGGGCTTAATGTGAAGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR TCA 72 bp AGGCTCAAAAGGTCCCCAGTACTGGAATGCTTTCTATaGCCAGATAAATCAGTAACAATGAATCTGTCCCTT +
Preference number: 3 (lower is better)
Translates to: RLKRSPVLECFL*PDKSVTMNLSL
Trigger: AAGGGACAGATTCATTGTTACTGATTTATCTGGTCATAGAAAGCATTCCAGTACTGGGGACCTTTTGAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CAA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAAAGGCTACTGTGCTGTaGTTATGCTACAAACAAACA +
Preference number: 3 (lower is better)
Translates to: DISRYHSEEGSDELPFLRKATVL*LCYKQT
Trigger: TGTTTGTTTGTAGCATAACAACAGCACAGTAGCCTT...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTGTTTTCAGAATGAGGTaGCCAGCACTGACAGATGTG +
Preference number: 3 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSVFRMR*PALTDV
Trigger: CACATCTGTCAGTGCTGGCAACCTCATTCTGAAAAC...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CAA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTCGTGCTGAAGATGTTTaGTGTAGTTCTGTTGCACAG +
Preference number: 3 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSRAEDV*CSSVAQ
Trigger: CTGTGCAACAGAACTACACAAAACATCTTCAGCACG...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATAAGAACAGGGAGTTATaGTTTTATGGGATCACCTGC +
Preference number: 3 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHKNREL*FYGITC
Trigger: GCAGGTGATCCCATAAAACAATAACTCCCTGTTCTT...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCGGTAACATATGCAGTTaGGTTACCCACATTACACAT +
Preference number: 3 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCGNICS*VTHITH
Trigger: ATGTGTAATGTGGGTAACCAAACTGCATATGTTACC...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp ACAGCATTTGAATTAGCAATGACATCTTTGGGCTCTGAATCAATGGCATTTATAAATAATGTCATCTCGTaGGTACATAGGTGGGCGCCA +
Preference number: 3 (lower is better)
Translates to: TAFELAMTSLGSESMAFINNVIS*VHRWAP
Trigger: TGGCGCCCACCTATGTACCAACGAGATGACATTATT...TATAAATGCCATTGATTCAGAGCCCAAAGATGTCATTGCTAATTCAAATGCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CAA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTCGGCAGAATTGTTTTTaGCTCCTCCAGAATCACATG +
Preference number: 3 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSRQNCF*LLQNHM
Trigger: CATGTGATTCTGGAGGAGCAAAAAACAATTCTGCCG...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR TCA 72 bp GCTAGTGTAAATGCTTCCATGGTGTGGTCACAAATTTaGAAGATGAACCTCCTTTCAGCTGTTAACCATCTT +
Preference number: 3 (lower is better)
Translates to: ASVNASMVWSQI*KMNLLSAVNHL
Trigger: AAGATGGTTAACAGCTGAAAGGAGGTTCATCTTTCAAATTTGTGACCACACCATGGAAGCATTTACACTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
3UTR TCA 72 bp TATACTGGTACTCTAGTTAGAAATGGGCTGGATTTTTaGGGCACAGAATTCAGCTCTGTTCCAACATTAGAG +
Preference number: 3 (lower is better)
Translates to: YTGTLVRNGLDF*GTEFSSVPTLE
Trigger: CTCTAATGTTGGAACAGAGCTGAATTCTGTGCCTCAAAAATCCAGCCCATTTCTAACTAGAGTACCAGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CAA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATAAGCACCTGATTCTTTaGCCAAGTCATCAGATTCAA +
Preference number: 3 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHKHLIL*PSHQIQ
Trigger: TTGAATCTGATGACTTGGCAAAAGAATCAGGTGCTT...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGGACTTGTTGAACACATaGTATACTTTCAGATGCCAA +
Preference number: 3 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQDLLNT*YTFRCQ
Trigger: TTGGCATCTGAAAGTATACAATGTGTTCAACAAGTC...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAAAGAACAGGGAGTTATaGTTTTATGGGATCACCTGC +
Preference number: 3 (lower is better)
Translates to: YFQMPSQNHFSHILARQKKNREL*FYGITC
Trigger: GCAGGTGATCCCATAAAACAATAACTCCCTGTTCTT...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAGTTTATCACATGGCATaGAAAATAAGACGTGGCAGC +
Preference number: 3 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPVYHMA*KIRRGS
Trigger: GCTGCCACGTCTTATTTTCAATGCCATGTGATAAAC...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAAGTGCATCACATCCATaGGAGGTAAAGAATTGCTTC +
Preference number: 3 (lower is better)
Translates to: YFQMPSQNHFSHILARQKSASHP*EVKNCF
Trigger: GAAGCAATTCTTTACCTCCAATGGATGTGATGCACT...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR TCA 72 bp CTGCCATTCCATTTAGCAACTGATCATTTTGAGAACTaGTACCAAGCTGTATGTCCAAGATCTCTTCAATTG +
Preference number: 3 (lower is better)
Translates to: LPFHLATDHFEN*YQAVCPRSLQL
Trigger: CAATTGAAGAGATCTTGGACATACAGCTTGGTATCAGTTCTCAAAATGATCAGTTGCTAAATGGAATGGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR-3UTR CAA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATGACTTGTTGAACACATaGTATACTTTCAGATGCCAA +
Preference number: 3 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHDLLNT*YTFRCQ
Trigger: TTGGCATCTGAAAGTATACAATGTGTTCAACAAGTC...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTAAGGCTACTGTGCTGTaGTTATGCTACAAACAAACA +
Preference number: 3 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSKATVL*LCYKQT
Trigger: TGTTTGTTTGTAGCATAACAACAGCACAGTAGCCTT...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR-3UTR CAA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGTACATCACATCTTGTaGGTAAAAAGGCCAAATGAC +
Preference number: 3 (lower is better)
Translates to: YFQMPSQNHFSHILARQKVHHIL*VKRPND
Trigger: GTCATTTGGCCTTTTTACCAACAAGATGTGATGTAC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAACCTTTGATTCCAAATTaGTACATCACATCTTGTTGG +
Preference number: 3 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKPLIPN*YITSCW
Trigger: CCAACAAGATGTGATGTACAAATTTGGAATCAAAGG...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR GCA 72 bp GTTACTGCACCGGATTGCTACAAACTCATAAAAAGCTaGTTGAAGCTTAAGTTAAATGTTGTCCAAATTCCA +
Preference number: 3 (lower is better)
Translates to: VTAPDCYKLIKS*LKLKLNVVQIP
Trigger: TGGAATTTGGACAACATTTAACTTAAGCTTCAAGCAGCTTTTTATGAGTTTGTAGCAATCCGGTGCAGTAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR GCA 72 bp TTTAAAATAGGAAATGGCTCAGTTACTGCACCGGATTaGTACAAACTCATAAAAAGCTGCTTGAAGCTTAAG +
Preference number: 3 (lower is better)
Translates to: FKIGNGSVTAPD*YKLIKSCLKLK
Trigger: CTTAAGCTTCAAGCAGCTTTTTATGAGTTTGTAGCAATCCGGTGCAGTAACTGAGCCATTTCCTATTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR GCA 72 bp AAATTAAAAACCCAGCAATACCATCTTGTTAGTCAGTaGAAACGCTACATACAGGGTTTTCTCAAGAAAGCT +
Preference number: 3 (lower is better)
Translates to: KLKTQQYHLVSQ*KRYIQGFLKKA
Trigger: AGCTTTCTTGAGAAAACCCTGTATGTAGCGTTTGCACTGACTAACAAGATGGTATTGCTGGGTTTTTAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR-3UTR CAA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAATCCTCTCTTGTTGCTTaGTATCCTTTGATTCCAAAT +
Preference number: 3 (lower is better)
Translates to: YFQMPSQNHFSHILARQKSSLVA*YPLIPN
Trigger: ATTTGGAATCAAAGGATACAAAGCAACAAGAGAGGA...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR-3UTR CAA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTCTGATGCATGACTTGTaGAACACATTGTATACTTTC +
Preference number: 3 (lower is better)
Translates to: HREWMQHRIISTQKQFLCLMHDL*NTLYTF
Trigger: GAAAGTATACAATGTGTTCAACAAGTCATGCATCAG...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR TCA 72 bp AATGTATTTCCTGGAGTCTCCCAAATTATCTTGATGTaGAATTCTGTATATAGAACTAGTTCGATTGGGTAC +
Preference number: 3 (lower is better)
Translates to: NVFPGVSQIILM*NSVYRTSSIGY
Trigger: GTACCCAATCGAACTAGTTCTATATACAGAATTTCACATCAAGATAATTTGGGAGACTCCAGGAAATACATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp ACAAAGCGAGGAACACAGGGAGCCACACCAGCTGGTACCGTTGGAGGTGGTGGAAGGTACTGGAGGAACTaGTCCATACGGCTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: TKRGTQGATPAGTVGGGGRYWRN*SIRLRR
Trigger: CCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCT...TCCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp CAGAAGGTACTGGAGGAACTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGTCGTTGGTACATAGGTaGGCGCCAGATGCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: QKVLEELVHTAAEEEAGKSLVHR*APDAPA
Trigger: AGCAGGCGCATCTGGCGCCCACCTATGTACCAACGA...CTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCGGCATCCTCGAGCCCTaGCAGCGGCCCATAGATTGG +
Preference number: 4 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLGILEP*QRPIDW
Trigger: CCAATCTATGGGCCGCTGTCAGGGCTCGAGGATGCC...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp CTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGGAGAAGAATTCATTCGATGGGAGCCACACCAGCTaGTACCGTTGGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LVHTAAEEEAGKEKNSFDGSHTS*YRWRWW
Trigger: CCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCC...ATCGAATGAATTCTTCTCCTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp CCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCGGCATCCTCGAGCCCTaGCAGCGGCCCATAGATTGG +
Preference number: 4 (lower is better)
Translates to: PSSREFHFCCMAKALASLGILEP*QRPIDW
Trigger: CCAATCTATGGGCCGCTGTCAGGGCTCGAGGATGCC...GAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp ATCTTGCTCTGTCGTCCACACAGGAGTATAGTGGCGCCATCTCGGCTCACTGCACCCACCTCAGCCTCCTaGGTAGCTAAGATGACAGGC +
Preference number: 4 (lower is better)
Translates to: ILLCRPHRSIVAPSRLTAPTSAS*VAKMTG
Trigger: GCCTGTCATCTTAGCTACTCAGGAGGCTGAGGTGGG...TGCAGTGAGCCGAGATGGCGCCACTATACTCCTGTGTGGACGACAGAGCAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp ACAAAGCGAGGAACACAGGGAGCCACACCAGCTGGTACCGTTGGAGGTGGTGGAAGAAGGTGGTGTTGGTaGCTGTGTTGCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: TKRGTQGATPAGTVGGGGRRWCW*LCCHRK
Trigger: CTTCCTGTGGCAACACAGTCACCAACACCACCTTCT...TCCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp CAGAAGGTACTGGAGGAACTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGAGGTTTAAGGTAAGGTaGCGGCCTTCATCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: QKVLEELVHTAAEEEAGKRFKVR*RPSSRE
Trigger: TTCCCTGGATGAAGGCCGTCACCTTACCTTAAACCT...CTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp ACAAAGCGAGGAACACAGGGAGCCACACCAGCTGGTACCGTTGGAGGTGGTGGACATTCCAGAAGGTACTaGAGGAACTGGTCCATACGG +
Preference number: 4 (lower is better)
Translates to: TKRGTQGATPAGTVGGGGHSRRY*RNWSIR
Trigger: CCGTATGGACCAGTTCCTCCAGTACCTTCTGGAATG...TCCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp CTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGGAGAAGAATTCATTCGATCAGCGGCCCATAGATTaGCAGACAACTGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LVHTAAEEEAGKEKNSFDQRPID*QTTAEG
Trigger: ACCCTCAGCAGTTGTCTGCCAATCTATGGGCCGCTG...ATCGAATGAATTCTTCTCCTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp CAGAAGGTACTGGAGGAACTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGATAATGTCATCTCGTTaGTACATAGGTGGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: QKVLEELVHTAAEEEAGKIMSSR*YIGGRQ
Trigger: CTGGCGCCCACCTATGTACCAACGAGATGACATTAT...CTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp GTGACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCTGTCCTTGGCTCACTTaGTGGCTGACAAGCCACCGA +
Preference number: 4 (lower is better)
Translates to: VTAFIQGIPLLLHGQSIGCPWLT*WLTSHR
Trigger: TCGGTGGCTTGTCAGCCACCAAGTGAGCCAAGGACA...GCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp CAGAAGGTACTGGAGGAACTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGCTGTACGGGAAGATCTaGAAATCGCACCCCATTTTG +
Preference number: 4 (lower is better)
Translates to: QKVLEELVHTAAEEEAGKLYGKI*KSHPIL
Trigger: CAAAATGGGGTGCGATTTCCAGATCTTCCCGTACAG...CTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp GCATACATTCCAGAAGGTACTGGAGGAACTGGTCCATACGGCTGCGGAGGAGGATTAGTCGCACTTCCTTaGGAAGCAGTGGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: AYIPEGTGGTGPYGCGGGLVALP*EAVAWT
Trigger: TGTCCAGGCCACTGCTTCCCAAGGAAGTGCGACTAA...TCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTGGAATGTATGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCGGACCACTGTTCAGGTaGAATACGGAGTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLGPLFR*NTESCF
Trigger: GAAGCAGGACTCCGTATTTCACCTGAACAGTGGTCC...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp CAAGAGGTGCTTTCTGAGTGTGGTACTGTGCCCACTGATCTGGCTTTCTTCTTAGGCGCCAGATGCGCCTaGTGTCGTACACAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: QEVLSECGTVPTDLAFFLGARCA*CRTQEH
Trigger: ATGCTCCTGTGTACGACAGCAGGCGCATCTGGCGCC...TAAGAAGAAAGCCAGATCAGTGGGCACAGTACCACACTCAGAAAGCACCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp ATCTTGCTCTGTCGTCCACACAGGAGTATAGTGGCGCCATCTCGGCTCACTGCAAACGAGCTGCTCGCATaGCTCTTACACGACCTTCTT +
Preference number: 4 (lower is better)
Translates to: ILLCRPHRSIVAPSRLTANELLA*LLHDLL
Trigger: AAGAAGGTCGTGTAAGAGCCATGCGAGCAGCTCGTT...TGCAGTGAGCCGAGATGGCGCCACTATACTCCTGTGTGGACGACAGAGCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTAGGTACTGGAGGAACTaGTCCATACGGCTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSRYWRN*SIRLRR
Trigger: CCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCT...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GTGACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCCTGGACAGGATCTGTaGTATGGTAACCTGTACGGG +
Preference number: 4 (lower is better)
Translates to: VTAFIQGIPLLLHGQSIGPGQDL*YGNLYG
Trigger: CCCGTACAGGTTACCATACCACAGATCCTGTCCAGG...GCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
CDS-3UTR CCA 90 bp CCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGGGAAGCAGTGGCCTaGACAGGATCTGTGGTATGG +
Preference number: 4 (lower is better)
Translates to: PSSREFHFCCMAKALASLWEAVA*TGSVVW
Trigger: CCATACCACAGATCCTGTCCAGGCCACTGCTTCCCA...GAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
CDS-3UTR CCA 90 bp GACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTTTAGTCGCACTTCCTTaGGAAGCAGTGGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: DGLHPGNSTSVAWPKHWPLVALP*EAVAWT
Trigger: TGTCCAGGCCACTGCTTCCCAAGGAAGTGCGACTAA...AGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
CDS-3UTR CCA 90 bp ACAAAGCGAGGAACACAGGGAGCCACACCAGCTGGTACCGTTGGAGGTGGTGGAATTGCTAATAGACACTaGGAGTGGCTGGCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: TKRGTQGATPAGTVGGGGIANRH*EWLAKA
Trigger: TGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAAT...TCCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CAA 72 bp TCAAATGACCACAAGGTTCCCTTGGTAAAGGCACAGTaGTCCTTGGCTCACTTGGTGGCTGACAAGCCACCG +
Preference number: 4 (lower is better)
Translates to: SNDHKVPLVKAQ*SLAHLVADKPP
Trigger: CGGTGGCTTGTCAGCCACCAAGTGAGCCAAGGACAACTGTGCCTTTACCAAGGGAACCTTGTGGTCATTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp ACAAAGCGAGGAACACAGGGAGCCACACCAGCTGGTACCGTTGGAGGTGGTGGAGGAGAAGTGCGAAGTTaGCAGGAAGTACATCAATAT +
Preference number: 4 (lower is better)
Translates to: TKRGTQGATPAGTVGGGGGEVRS*QEVHQY
Trigger: ATATTGATGTACTTCCTGTCAACTTCGCACTTCTCC...TCCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCTTGGCAGACAACTGCTaGGGGTTCTGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLLADNC*GFWCCN
Trigger: ATTACAGCACCAGAACCCTCAGCAGTTGTCTGCCAA...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTGGCATCCTCGAGCCCTaGCAGCGGCCCATAGATTGG +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFGILEP*QRPIDW
Trigger: CCAATCTATGGGCCGCTGTCAGGGCTCGAGGATGCC...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp AAGGTGACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCCAGCAGCATTCTaGCCATTAGCGCCAACCTTT +
Preference number: 4 (lower is better)
Translates to: KVTAFIQGIPLLLHGQSIGPAAF*PLAPTF
Trigger: AAAGGTTGGCGCTAATGGTCAGAATGCTGCTGGGCC...AATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp AATAATGTCATCTCGTTGGTACATAGGTGGGCGCCAGATGCGCCTGCTGTCGTAACAAGAGGTGCTTTCTaGGTGTGGTACTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: NNVISLVHRWAPDAPAVVTRGAF*VWYCAH
Trigger: GTGGGCACAGTACCACACTCAGAAAGCACCTCTTGT...TACGACAGCAGGCGCATCTGGCGCCCACCTATGTACCAACGAGATGACATTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR GCA 90 bp GACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTTTCTGTCCATTGAGCTaGCTGCACAGGCATTGTGGA +
Preference number: 4 (lower is better)
Translates to: DGLHPGNSTSVAWPKHWPFCPLS*LHRHCG
Trigger: TCCACAATGCCTGTGCAGGCAGCTCAATGGACAGAA...AGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR GCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCGTCACCAGTTTCCTTTaGATTGGACGGCTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLVTSFL*IGRLSA
Trigger: TGCACTGAGCCGTCCAATGCAAAGGAAACTGGTGAC...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp ATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGTCCAAGGGAACGAGCTaGTCGCATGGCTCTTACACG +
Preference number: 4 (lower is better)
Translates to: IQGIPLLLHGQSIGLSLKSKGTS*SHGSYT
Trigger: CGTGTAAGAGCCATGCGAGCAGCTCGTTCCCTTGGA...CTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR GCA 90 bp ATCTTGCTCTGTCGTCCACACAGGAGTATAGTGGCGCCATCTCGGCTCACTGCATTTGAGACGGAATCTTaGTCTGTCGTCCACACAGGA +
Preference number: 4 (lower is better)
Translates to: ILLCRPHRSIVAPSRLTAFETES*SVVHTG
Trigger: TCCTGTGTGGACGACAGAGCAAGATTCCGTCTCAAA...TGCAGTGAGCCGAGATGGCGCCACTATACTCCTGTGTGGACGACAGAGCAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp GCATACATTCCAGAAGGTACTGGAGGAACTGGTCCATACGGCTGCGGAGGAGGAATGATGTGGCCTCGTTaGCATATGAACTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: AYIPEGTGGTGPYGCGGGMMWPR*HMNSTL
Trigger: CAAGGTGGAGTTCATATGGCAACGAGGCCACATCAT...TCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTGGAATGTATGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp GACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCAGTTTCCTTTGCATTaGACGGCTCAGTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: DGLHPGNSTSVAWPKHWPQFPLH*TAQCTL
Trigger: CAGAGTGCACTGAGCCGTCCAATGCAAAGGAAACTG...AGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCACAATTTGTTCCTCGTaGACAACCCCCTTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLTICSS*TTPLLS
Trigger: CGACAGCAAGGGGGTTGTCCACGAGGAACAAATTGT...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTCAGGGACAGCCCCGTTaGCGGCGGCGAAGGCCGCGA +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSQGQPR*RRRRPR
Trigger: TCGCGGCCTTCGCCGCCGCCAACGGGGCTGTCCCTG...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357244.7
CDS-3UTR CCA 90 bp GACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTTGGTACCGTTGGAGGTaGTGGATAGTATCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: DGLHPGNSTSVAWPKHWPWYRWR*WIVSCL
Trigger: CAGACAGGATACTATCCACCACCTCCAACGGTACCA...AGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp GTGACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCTTATACAGGAGCCTATaGTGCCACAAGACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VTAFIQGIPLLLHGQSIGLYRSL*CHKTRE
Trigger: CTCCCTGGTCTTGTGGCACCATAGGCTCCTGTATAA...GCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCAGAAATTCTGTCCATTaGGCTGCCTGCACAGGCATT +
Preference number: 4 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLRNSVH*AACTGI
Trigger: AATGCCTGTGCAGGCAGCTCAATGGACAGAATTTCT...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp ATCTTGCTCTGTCGTCCACACAGGAGTATAGTGGCGCCATCTCGGCTCACTGCACAGGTATGGACAAGCTaGATGTATTTCCTGGAGTCT +
Preference number: 4 (lower is better)
Translates to: ILLCRPHRSIVAPSRLTAQVWTS*MYFLES
Trigger: AGACTCCAGGAAATACATTCAGCTTGTCCATACCTG...TGCAGTGAGCCGAGATGGCGCCACTATACTCCTGTGTGGACGACAGAGCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp CTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGGAGAAGAATTCATTCGATCAACTGGTCTTCAAATaGCCACAAGGTTCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LVHTAAEEEAGKEKNSFDQLVFK*PQGSLG
Trigger: ACCAAGGGAACCTTGTGGTCATTTGAAGACCAGTTG...ATCGAATGAATTCTTCTCCTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp CTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGGAGAAGAATTCATTCGATTGGTACTGTGCCCACTaGTCTGGCTTTCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: LVHTAAEEEAGKEKNSFDWYCAH*SGFLLI
Trigger: GATAAGAAGAAAGCCAGATCAGTGGGCACAGTACCA...ATCGAATGAATTCTTCTCCTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp GTGACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCAATCGCACCCCATTTTaGGATGATGGGTCCATCACT +
Preference number: 4 (lower is better)
Translates to: VTAFIQGIPLLLHGQSIGNRTPF*DDGSIT
Trigger: AGTGATGGACCCATCATCTCAAAATGGGGTGCGATT...GCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
CDS-3UTR TCA 90 bp GGTGATGGGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAATTGCTCTTGGCCTGCTaGAGTTCAAGGCTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: GDGEATCIANRHWEWLAKLLLAC*SSRLKR
Trigger: CCTTTTGAGCCTTGAACTTCAGCAGGCCAAGAGCAA...TTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR GCA 90 bp GGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAGCAAGAACATTGGACGGCTCAGTaGACTCTGGTTCAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: GRQLALLIDTGSGWLKQEHWTAQ*TLVQAS
Trigger: GCTAGCTTGAACCAGAGTGCACTGAGCCGTCCAATG...TTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR GCA 90 bp ATCTTGCTCTGTCGTCCACACAGGAGTATAGTGGCGCCATCTCGGCTCACTGCAGGGCATCATGTTCTCTaGGTAATGCTTCATAACTCC +
Preference number: 4 (lower is better)
Translates to: ILLCRPHRSIVAPSRLTAGHHVL*VMLHNS
Trigger: GGAGTTATGAAGCATTACGCAGAGAACATGATGCCC...TGCAGTGAGCCGAGATGGCGCCACTATACTCCTGTGTGGACGACAGAGCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp ATCTTGCTCTGTCGTCCACACAGGAGTATAGTGGCGCCATCTCGGCTCACTGCACTACTATGTATGGAGTaGTATGGCAGCATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: ILLCRPHRSIVAPSRLTALLCME*YGSMVK
Trigger: CTTCACCATGCTGCCATAGCACTCCATACATAGTAG...TGCAGTGAGCCGAGATGGCGCCACTATACTCCTGTGTGGACGACAGAGCAAGAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACGCTGGCCCTAAAAACTaGCATCCTCGAGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHAGPKN*HPRALT
Trigger: TGTCAGGGCTCGAGGATGCCAGTTTTTAGGGCCAGC...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp GGTGATGGGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAACAATTTGTTCCTCGTaGACAACCCCCTTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: GDGEATCIANRHWEWLAKTICSS*TTPLLS
Trigger: CGACAGCAAGGGGGTTGTCCACGAGGAACAAATTGT...TTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp ACATTAGAGGGCCCAGCTGAGGTAGCTGCTACATTACTTACAGGAGTCTTGGGTACCAGCTGGTACCGTTaGAGGTGGTGGATAGTATCC +
Preference number: 4 (lower is better)
Translates to: TLEGPAEVAATLLTGVLGTSWYR*RWWIVS
Trigger: GGATACTATCCACCACCTCCAACGGTACCAGCTGGT...ACCCAAGACTCCTGTAAGTAATGTAGCAGCTACCTCAGCTGGGCCCTCTAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAGGGAGCCACACCAGCTaGTACCGTTGGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRGSHTS*YRWRWW
Trigger: CCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCC...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp ATGAGGTTGCCAGCACTGACAGATGTGGTGATGGGGAGGCAACTTGCATTGCTAGTAATGATCGGCATATaGCATGGAAGCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: MRLPALTDVVMGRQLALLVMIGI*HGSRWE
Trigger: CTCCCACCTGCTTCCATGCCATATGCCGATCATTAC...TAGCAATGCAAGTTGCCTCCCCATCACCACATCTGTCAGTGCTGGCAACCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCATCGTTGGTACATAGGTaGGCGCCAGATGCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSSLVHR*APDAPA
Trigger: AGCAGGCGCATCTGGCGCCCACCTATGTACCAACGA...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTCCTGGACAGGATCTGTaGTATGGTAACCTGTACGGG +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSPGQDL*YGNLYG
Trigger: CCCGTACAGGTTACCATACCACAGATCCTGTCCAGG...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGATGGGAAGCAGTGGCCTaGACAGGATCTGTGGTATGG +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGWEAVA*TGSVVW
Trigger: CCATACCACAGATCCTGTCCAGGCCACTGCTTCCCA...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACTTCCTTGGGAAGCAGTaGCCTGGACAGGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHFLGKQ*PGQDLW
Trigger: CCACAGATCCTGTCCAGGCCACTGCTTCCCAAGGAA...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp GACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTAGTGTGCTGATGATGTaGCCTCGTTGCCATATGAAC +
Preference number: 4 (lower is better)
Translates to: DGLHPGNSTSVAWPKHWPSVLMM*PRCHMN
Trigger: GTTCATATGGCAACGAGGCCACATCATCAGCACACT...AGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
CDS-3UTR CCA 90 bp ATGAGGTTGCCAGCACTGACAGATGTGGTGATGGGGAGGCAACTTGCATTGCTATCCACTTCTGTTGCATaGCCAAAGCATTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: MRLPALTDVVMGRQLALLSTSVA*PKHWPL
Trigger: GAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGA...TAGCAATGCAAGTTGCCTCCCCATCACCACATCTGTCAGTGCTGGCAACCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CCA 90 bp CCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTCCACTTCTGTTGCATaGCCAAAGCATTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: PSSREFHFCCMAKALASLSTSVA*PKHWPL
Trigger: GAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGA...GAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
CDS-3UTR CCA 90 bp ACAAAGCGAGGAACACAGGGAGCCACACCAGCTGGTACCGTTGGAGGTGGTGGACAAGATCTCTTCAATTaGTTCACTTTGTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: TKRGTQGATPAGTVGGGGQDLFN*FTLSIR
Trigger: CCTGATGGACAAAGTGAACCAATTGAAGAGATCTTG...TCCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp ATGAGGTTGCCAGCACTGACAGATGTGGTGATGGGGAGGCAACTTGCATTGCTATTGGTGCTGCTGTACTaGATGCCCATTTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: MRLPALTDVVMGRQLALLLVLLY*MPIFHC
Trigger: GCAGTGGAAAATGGGCATCCAGTACAGCAGCACCAA...TAGCAATGCAAGTTGCCTCCCCATCACCACATCTGTCAGTGCTGGCAACCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CCA 90 bp ATGAGGTTGCCAGCACTGACAGATGTGGTGATGGGGAGGCAACTTGCATTGCTATTTGGTGGCTCCTTTTaGTGCTGCTGTACTGGATGC +
Preference number: 4 (lower is better)
Translates to: MRLPALTDVVMGRQLALLFGGSF*CCCTGC
Trigger: GCATCCAGTACAGCAGCACCAAAAGGAGCCACCAAA...TAGCAATGCAAGTTGCCTCCCCATCACCACATCTGTCAGTGCTGGCAACCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
3UTR CAA 72 bp AAGGTGACGGCCTTCATCCAGGGAATTCCACTTCTGTaGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: KVTAFIQGIPLL*HGQSIGLSLKK
Trigger: CTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
CDS-3UTR TCA 90 bp ATGAGGTTGCCAGCACTGACAGATGTGGTGATGGGGAGGCAACTTGCATTGCTATCTTCCTCCACCAGTTaGCAGTTTACAAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: MRLPALTDVVMGRQLALLSSSTS*QFTSVT
Trigger: GGTGACACTTGTAAACTGTCAACTGGTGGAGGAAGA...TAGCAATGCAAGTTGCCTCCCCATCACCACATCTGTCAGTGCTGGCAACCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp AAGGTGACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTTTGGCAGACAACTGCTaGGGGTTCTGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: KVTAFIQGIPLLLHGQSILADNC*GFWCCN
Trigger: ATTACAGCACCAGAACCCTCAGCAGTTGTCTGCCAA...AATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp CCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTACCAGAACTTTCCTTaGGAGGGCAGAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: PSSREFHFCCMAKALASLYQNFP*EGRTIF
Trigger: GAAGATGGTTCTGCCCTCTCAAGGAAAGTTCTGGTA...GAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp ATCTTGCTCTGTCGTCCACACAGGAGTATAGTGGCGCCATCTCGGCTCACTGCAGCAAGAAGCTCTAAATaGGGCCTCAGTCTATTTAAG +
Preference number: 4 (lower is better)
Translates to: ILLCRPHRSIVAPSRLTAARSSK*GLSLFK
Trigger: CTTAAATAGACTGAGGCCTCATTTAGAGCTTCTTGC...TGCAGTGAGCCGAGATGGCGCCACTATACTCCTGTGTGGACGACAGAGCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp GTGACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCTGTCTGATAGACAGATaGGTGCATCACATCCATTGG +
Preference number: 4 (lower is better)
Translates to: VTAFIQGIPLLLHGQSIGCLIDR*VHHIHW
Trigger: CCAATGGATGTGATGCACTCATCTGTCTATCAGACA...GCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACACAAGAGGTGCTTTCTaGGTGTGGTACTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHTRGAF*VWYCAH
Trigger: GTGGGCACAGTACCACACTCAGAAAGCACCTCTTGT...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp ATGAGGTTGCCAGCACTGACAGATGTGGTGATGGGGAGGCAACTTGCATTGCTAGCATTGGCCTCTCTCTaGAGAAGTAATGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: MRLPALTDVVMGRQLALLALASL*RSNELL
Trigger: GAGCAACTCATTACTTCTTCAGAGAGAGGCCAATGC...TAGCAATGCAAGTTGCCTCCCCATCACCACATCTGTCAGTGCTGGCAACCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR TCA 90 bp ATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAGGTTTAAGGTAAGGTaGCGGCCTTCATCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: IQGIPLLLHGQSIGLSLKRFKVR*RPSSRE
Trigger: TTCCCTGGATGAAGGCCGTCACCTTACCTTAAACCT...CTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
CDS-3UTR TCA 90 bp GGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAGCAAGAAAGGTTTAAGGTAAGGTaGCGGCCTTCATCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GRQLALLIDTGSGWLKQERFKVR*RPSSRE
Trigger: TTCCCTGGATGAAGGCCGTCACCTTACCTTAAACCT...TTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR TCA 90 bp CAGAAGGTACTGGAGGAACTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGCACAAATTTGAAAGATaGACCTCCTTTCAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: QKVLEELVHTAAEEEAGKHKFER*TSFQLL
Trigger: TAACAGCTGAAAGGAGGTTCATCTTTCAAATTTGTG...CTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp CAGAAGGTACTGGAGGAACTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGGTACTTCAGTGGCATTaGTCTTTTTGTTCCTTAATC +
Preference number: 4 (lower is better)
Translates to: QKVLEELVHTAAEEEAGKVLQWH*SFCSLI
Trigger: GATTAAGGAACAAAAAGATCAATGCCACTGAAGTAC...CTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR GCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACCATTGGACGGCTCAGTaGACTCTGGTTCAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHHWTAQ*TLVQAS
Trigger: GCTAGCTTGAACCAGAGTGCACTGAGCCGTCCAATG...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCTTCAAGGCCTCTTCTTaGATAGCTGGCCCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLFKASS*IAGPKN
Trigger: GTTTTTAGGGCCAGCTATGCAAGAAGAGGCCTTGAA...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAGGCGCCAGATGCGCCTaGTGTCGTACACAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRGARCA*CRTQEH
Trigger: ATGCTCCTGTGTACGACAGCAGGCGCATCTGGCGCC...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp CCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCGGCTTTCTTCTTATCTaGTCCTCGCAACTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: PSSREFHFCCMAKALASLGFLLI*SSQLVF
Trigger: GAAGACCAGTTGCGAGGAGCAGATAAGAAGAAAGCC...GAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR GCA 90 bp GGTGATGGGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAGAATTCCACTTCTGTTaGATGGCCAAAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: GDGEATCIANRHWEWLAKEFHFC*MAKALA
Trigger: GGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTC...TTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR GCA 90 bp GGTGATGGGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAATGCTGCTGTACTGGATaGCCATTTTCCACTGCCATT +
Preference number: 4 (lower is better)
Translates to: GDGEATCIANRHWEWLAKCCCTG*PFSTAI
Trigger: AATGGCAGTGGAAAATGGGCATCCAGTACAGCAGCA...TTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR GCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTGGCTCCTTTTGGTGCTaGTGTACTGGATGCCCATTT +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSGSFWC*CTGCPF
Trigger: AAATGGGCATCCAGTACAGCAGCACCAAAAGGAGCC...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GGTGATGGGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAGATGGGGAGGCAACTTaGATTGCTAATAGACACTGG +
Preference number: 4 (lower is better)
Translates to: GDGEATCIANRHWEWLAKDGEAT*IANRHW
Trigger: CCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATC...TTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CCA 90 bp CAGAAGGTACTGGAGGAACTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGACAATTGTCAATTCCTaGACACTCTTTGCAAATGAC +
Preference number: 4 (lower is better)
Translates to: QKVLEELVHTAAEEEAGKTIVNS*TLFAND
Trigger: GTCATTTGCAAAGAGTGTCCAGGAATTGACAATTGT...CTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTACAATTTGTTCCTCGTaGACAACCCCCTTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSTICSS*TTPLLS
Trigger: CGACAGCAAGGGGGTTGTCCACGAGGAACAAATTGT...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCAATGGATTTTCAGCCTaGGCACTAATTGAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLNGFSA*ALIEGG
Trigger: TCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATT...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp ACATTAGAGGGCCCAGCTGAGGTAGCTGCTACATTACTTACAGGAGTCTTGGGTTACCGTTGGAGGTGGTaGATAGTATCCTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: TLEGPAEVAATLLTGVLGYRWRW*IVSCLW
Trigger: CCACAGACAGGATACTATCCACCACCTCCAACGGTA...ACCCAAGACTCCTGTAAGTAATGTAGCAGCTACCTCAGCTGGGCCCTCTAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACACCAGCTGGTACCGTTaGAGGTGGTGGATAGTATCC +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHTSWYR*RWWIVS
Trigger: GGATACTATCCACCACCTCCAACGGTACCAGCTGGT...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTGTAATGATCGGCATATaGCATGGAAGCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSVMIGI*HGSRWE
Trigger: CTCCCACCTGCTTCCATGCCATATGCCGATCATTAC...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp AATAATGTCATCTCGTTGGTACATAGGTGGGCGCCAGATGCGCCTGCTGTCGTACTGTGCCCACTGATCTaGCTTTCTTCTTATCTGCTC +
Preference number: 4 (lower is better)
Translates to: NNVISLVHRWAPDAPAVVLCPLI*LSSYLL
Trigger: GAGCAGATAAGAAGAAAGCCAGATCAGTGGGCACAG...TACGACAGCAGGCGCATCTGGCGCCCACCTATGTACCAACGAGATGACATTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp TCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAGTAATGAGTTGGGAAGCAGTGGCCTaGACAGGATCTGTGGTATGG +
Preference number: 4 (lower is better)
Translates to: STSVAWPKHWPLSEEVMSWEAVA*TGSVVW
Trigger: CCATACCACAGATCCTGTCCAGGCCACTGCTTCCCA...ACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
CDS-3UTR CCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCATTCCTTGGGAAGCAGTaGCCTGGACAGGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSFLGKQ*PGQDLW
Trigger: CCACAGATCCTGTCCAGGCCACTGCTTCCCAAGGAA...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTTCCACTTCTGTTGCATaGCCAAAGCATTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSSTSVA*PKHWPL
Trigger: GAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGA...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTTTGGTGCTGCTGTACTaGATGCCCATTTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSLVLLY*MPIFHC
Trigger: GCAGTGGAAAATGGGCATCCAGTACAGCAGCACCAA...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTGACACTGGGAGTGGCTaGCTAAAGCAAGAAGTTACC +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSDTGSG*LKQEVT
Trigger: GGTAACTTCTTGCTTTAGCCAGCCACTCCCAGTGTC...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAGCAAGAAGACACTGGGAGTGGCTaGCTAAAGCAAGAAGTTACC +
Preference number: 4 (lower is better)
Translates to: GRQLALLIDTGSGWLKQEDTGSG*LKQEVT
Trigger: GGTAACTTCTTGCTTTAGCCAGCCACTCCCAGTGTC...TTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR TCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTAGAAATTCTGTCCATTaGGCTGCCTGCACAGGCATT +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSRNSVH*AACTGI
Trigger: AATGCCTGTGCAGGCAGCTCAATGGACAGAATTTCT...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCGGACAAGCTTTTCGATaGAGTTTATTCAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLGQAFR*SLFKQV
Trigger: GACCTGCTTGAATAAACTTCATCGAAAAGCTTGTCC...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCCATCAATATCTGTGTTaGTGGCAGTCTGGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLHQYLC*WQSGQK
Trigger: CTTTTGACCAGACTGCCATCAACACAGATATTGATG...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTTCTTCCTCCACCAGTTaGCAGTTTACAAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSSSSTS*QFTSVT
Trigger: GGTGACACTTGTAAACTGTCAACTGGTGGAGGAAGA...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATGGCATCCTCGAGCCCTaGCAGCGGCCCATAGATTGG +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHGILEP*QRPIDW
Trigger: CCAATCTATGGGCCGCTGTCAGGGCTCGAGGATGCC...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCGATAGACTGCATGTGTaGTTTATGAGCCAAATCACC +
Preference number: 4 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLDRLHV*FMSQIT
Trigger: GGTGATTTGGCTCATAAATCACACATGCAGTCTATC...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp CTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGGAGAAGAATTCATTCGATGATAGACTGCATGTGTaGTTTATGAGCCAAATCACC +
Preference number: 4 (lower is better)
Translates to: LVHTAAEEEAGKEKNSFDDRLHV*FMSQIT
Trigger: GGTGATTTGGCTCATAAATCACACATGCAGTCTATC...ATCGAATGAATTCTTCTCCTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp TCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAGTAATGAGTCTGCTCCCAAGTTGGTaGAACAGCGTCTGGATTAGG +
Preference number: 4 (lower is better)
Translates to: STSVAWPKHWPLSEEVMSLLPSW*NSVWIR
Trigger: CCTAATCCAGACGCTGTTTCACCAACTTGGGAGCAG...ACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCTGGATAAAAAGCCACTaGAGCAGTAAAACCAACTGG +
Preference number: 4 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLWIKSH*SSKTNW
Trigger: CCAGTTGGTTTTACTGCTTCAGTGGCTTTTTATCCA...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCAAGAAGGTGGTGTTGGTaGCTGTGTTGCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSRRWCW*LCCHRK
Trigger: CTTCCTGTGGCAACACAGTCACCAACACCACCTTCT...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTTTTGATCTGTGGTCTTaGCGCCTTGTATTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSFDLWS*RLVFPC
Trigger: GCAAGGGAATACAAGGCGTCAAGACCACAGATCAAA...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGAGTCACCAGTTTCCTTTaGATTGGACGGCTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGVTSFL*IGRLSA
Trigger: TGCACTGAGCCGTCCAATGCAAAGGAAACTGGTGAC...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp CCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTTCAAGGCCTCTTCTTaGATAGCTGGCCCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: PSSREFHFCCMAKALASLFKASS*IAGPKN
Trigger: GTTTTTAGGGCCAGCTATGCAAGAAGAGGCCTTGAA...GAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR GCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCAATTCCTCCTTCAGCTaGATTAGGGAAGAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLNSSFS*IREESS
Trigger: TGAAGACTCTTCCCTAATGCAGCTGAAGGAGGAATT...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTGGCTTTCTTCTTATCTaGTCCTCGCAACTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSGFLLI*SSQLVF
Trigger: GAAGACCAGTTGCGAGGAGCAGATAAGAAGAAAGCC...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp AAGGTGACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGAATTCCACTTCTGTTaGATGGCCAAAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: KVTAFIQGIPLLLHGQSIEFHFC*MAKALA
Trigger: GGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTC...AATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
CDS-3UTR GCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTGGTGGCTCCTTTTGGTaGTGCTGTACTGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFGGSFW*CCTGCP
Trigger: TGGGCATCCAGTACAGCAGCACCAAAAGGAGCCACC...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000454740.5
ENST00000498479.5
CDS-3UTR GCA 90 bp GACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCATCTTGTTAGTCAGTaGAAACGCTACATACAGGGT +
Preference number: 4 (lower is better)
Translates to: DGLHPGNSTSVAWPKHWPHLVSQ*KRYIQG
Trigger: ACCCTGTATGTAGCGTTTGCACTGACTAACAAGATG...AGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR GCA 90 bp GTGACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCATCACCAGGAAGGAATaGCCAGCTCTTCTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: VTAFIQGIPLLLHGQSIGITRKE*PALLFK
Trigger: TTTGAAAAGAAGAGCTGGGCATTCCTTCCTGGTGAT...GCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR GCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGAGCAGACAGCAGTTGCTaGAAGCTAACCACGATACTC +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGADSSC*KLTTIL
Trigger: GAGTATCGTGGTTAGCTTGCAGCAACTGCTGTCTGC...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCAAGGCATTGTGGAAGCTaGATGCTCGGGTTAGCAGTC +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSRHCGS*MLGLAV
Trigger: GACTGCTAACCCGAGCATCCAGCTTCCACAATGCCT...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp ATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGTGGGCTCCAACTAACTaGAGAAGTGCGAAGTTGACA +
Preference number: 4 (lower is better)
Translates to: IQGIPLLLHGQSIGLSLKWAPTN*RSAKLT
Trigger: TGTCAACTTCGCACTTCTCCAGTTAGTTGGAGCCCA...CTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCACGGCTCAGTGCACTCTaGTTCAAGCTAGCTACACCT +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSRLSAL*FKLATP
Trigger: AGGTGTAGCTAGCTTGAACCAGAGTGCACTGAGCCG...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTGCTGGCCCTAAAAACTaGCATCCTCGAGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFAGPKN*HPRALT
Trigger: TGTCAGGGCTCGAGGATGCCAGTTTTTAGGGCCAGC...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp ATCTTGCTCTGTCGTCCACACAGGAGTATAGTGGCGCCATCTCGGCTCACTGCATTAAACTACTATGTATaGAGTGCTATGGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: ILLCRPHRSIVAPSRLTALNYYV*SAMAAW
Trigger: CCATGCTGCCATAGCACTCCATACATAGTAGTTTAA...TGCAGTGAGCCGAGATGGCGCCACTATACTCCTGTGTGGACGACAGAGCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATGGGAGCCACACCAGCTaGTACCGTTGGAGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHGSHTS*YRWRWW
Trigger: CCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCC...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCACCTTGGCTCACTTGGTaGCTGACAAGCCACCGAATA +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSPWLTW*LTSHRI
Trigger: TATTCGGTGGCTTGTCAGCCACCAAGTGAGCCAAGG...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAGTAATGAGTTGCTCTCCTTGGCTCACTTGGTaGCTGACAAGCCACCGAATA +
Preference number: 4 (lower is better)
Translates to: SVAWPKHWPLSEEVMSCSPWLTW*LTSHRI
Trigger: TATTCGGTGGCTTGTCAGCCACCAAGTGAGCCAAGG...AGAGCAACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACTTATACAGGAGCCTATaGTGCCACAAGACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHLYRSL*CHKTRE
Trigger: CTCCCTGGTCTTGTGGCACCATAGGCTCCTGTATAA...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTTTCCTTGGGAAGCAGTaGCCTGGACAGGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFFLGKQ*PGQDLW
Trigger: CCACAGATCCTGTCCAGGCCACTGCTTCCCAAGGAA...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp AAGGTGACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTAGTGTGCTGATGATGTaGCCTCGTTGCCATATGAAC +
Preference number: 4 (lower is better)
Translates to: KVTAFIQGIPLLLHGQSISVLMM*PRCHMN
Trigger: GTTCATATGGCAACGAGGCCACATCATCAGCACACT...AATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
CDS-3UTR CCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGATCCACTTCTGTTGCATaGCCAAAGCATTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGSTSVA*PKHWPL
Trigger: GAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGA...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACTTTGGTGGCTCCTTTTaGTGCTGCTGTACTGGATGC +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHFGGSF*CCCTGC
Trigger: GCATCCAGTACAGCAGCACCAAAAGGAGCCACCAAA...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp ACATTAGAGGGCCCAGCTGAGGTAGCTGCTACATTACTTACAGGAGTCTTGGGTCTGTTTCTTCTGCTTTaGTGGCTCCTTTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: TLEGPAEVAATLLTGVLGLFLLL*WLLLVL
Trigger: CAGCACCAAAAGGAGCCACCAAAGCAGAAGAAACAG...ACCCAAGACTCCTGTAAGTAATGTAGCAGCTACCTCAGCTGGGCCCTCTAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp GGTGATGGGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAATTGCTAATAGACACTaGGAGTGGCTGGCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: GDGEATCIANRHWEWLAKIANRH*EWLAKA
Trigger: TGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAAT...TTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CCA 90 bp AATAATGTCATCTCGTTGGTACATAGGTGGGCGCCAGATGCGCCTGCTGTCGTAAGAGTCCACAGGAAATaGATGCCCCCAGTAATATCT +
Preference number: 4 (lower is better)
Translates to: NNVISLVHRWAPDAPAVVRVHRK*MPPVIS
Trigger: AGATATTACTGGGGGCATCCATTTCCTGTGGACTCT...TACGACAGCAGGCGCATCTGGCGCCCACCTATGTACCAACGAGATGACATTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp ACAAAGCGAGGAACACAGGGAGCCACACCAGCTGGTACCGTTGGAGGTGGTGGAAATTCCAATCATTTCTaGAAAGTGAACATGTTACCC +
Preference number: 4 (lower is better)
Translates to: TKRGTQGATPAGTVGGGGNSNHF*KVNMLP
Trigger: GGGTAACATGTTCACTTTCCAGAAATGATTGGAATT...TCCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
3UTR CAA 72 bp GTTCCCTTGGTAAAGGCACAGTTGTCCTTGGCTCACTaGGTGGCTGACAAGCCACCGAATAATATCCATCTA +
Preference number: 4 (lower is better)
Translates to: VPLVKAQLSLAH*VADKPPNNIHL
Trigger: TAGATGGATATTATTCGGTGGCTTGTCAGCCACCAAGTGAGCCAAGGACAACTGTGCCTTTACCAAGGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACAGAAATTCTGTCCATTaGGCTGCCTGCACAGGCATT +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHRNSVH*AACTGI
Trigger: AATGCCTGTGCAGGCAGCTCAATGGACAGAATTTCT...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCCTTGTTTTTGATGCCTaGGGAAATCTTGGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLLVFDA*GNLGSS
Trigger: ACTAGAACCAAGATTTCCTCAGGCATCAAAAACAAG...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTGGACCACTGTTCAGGTaGAATACGGAGTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFGPLFR*NTESCF
Trigger: GAAGCAGGACTCCGTATTTCACCTGAACAGTGGTCC...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGACAACTGGTCTTCAAATaGCCACAAGGTTCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGQLVFK*PQGSLG
Trigger: ACCAAGGGAACCTTGTGGTCATTTGAAGACCAGTTG...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACTGGTACTGTGCCCACTaGTCTGGCTTTCTTCTTATC +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHWYCAH*SGFLLI
Trigger: GATAAGAAGAAAGCCAGATCAGTGGGCACAGTACCA...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp GCATACATTCCAGAAGGTACTGGAGGAACTGGTCCATACGGCTGCGGAGGAGGATTTTCTCAAGAAAGCTaGAAGCACCTGATTCTTTTG +
Preference number: 4 (lower is better)
Translates to: AYIPEGTGGTGPYGCGGGFSQES*KHLILL
Trigger: CAAAAGAATCAGGTGCTTTCAGCTTTCTTGAGAAAA...TCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTGGAATGTATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCAACATTAAGCCCACCATaGCAGACAGAAGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSTLSPP*QTEGDH
Trigger: GTGGTCACCTTCTGTCTGTCATGGTGGGCTTAATGT...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCTATTCAAGCAGGTCTTaGAAACAGTGTGTGAACAAC +
Preference number: 4 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLYSSRS*KQCVNN
Trigger: GTTGTTCACACACTGTTTGCAAGACCTGCTTGAATA...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTCATTGGACGGCTCAGTaGACTCTGGTTCAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFHWTAQ*TLVQAS
Trigger: GCTAGCTTGAACCAGAGTGCACTGAGCCGTCCAATG...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAATCCAAGGGAACGAGCTaGTCGCATGGCTCTTACACG +
Preference number: 4 (lower is better)
Translates to: EENGFSAWALIEGGMAMKSKGTS*SHGSYT
Trigger: CGTGTAAGAGCCATGCGAGCAGCTCGTTCCCTTGGA...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTTTCAAGGCCTCTTCTTaGATAGCTGGCCCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSFKASS*IAGPKN
Trigger: GTTTTTAGGGCCAGCTATGCAAGAAGAGGCCTTGAA...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCCTTGGTTCTAGTCTCTaGACAACAAAAAGTACCAGA +
Preference number: 4 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLLGSSL*TTKSTR
Trigger: TCTGGTACTTTTTGTTGTGCAGAGACTAGAACCAAG...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp GTGACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTTGGTTCTAGTCTCTaGACAACAAAAAGTACCAGA +
Preference number: 4 (lower is better)
Translates to: VTAFIQGIPLLLHGQSIGLGSSL*TTKSTR
Trigger: TCTGGTACTTTTTGTTGTGCAGAGACTAGAACCAAG...GCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR GCA 90 bp AATAATGTCATCTCGTTGGTACATAGGTGGGCGCCAGATGCGCCTGCTGTCGTAATTGCATTTTCCAGCTaGTCCCAAGTTGGTGAAACA +
Preference number: 4 (lower is better)
Translates to: NNVISLVHRWAPDAPAVVIAFSS*SQVGET
Trigger: TGTTTCACCAACTTGGGAGCAGCTGGAAAATGCAAT...TACGACAGCAGGCGCATCTGGCGCCCACCTATGTACCAACGAGATGACATTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR GCA 90 bp AGAGTAGAGCTAGAGGATAAAATCAGGATGAGATTCTGTGATGTACTGAGGAACCGTGGACAACCCCCTTaGTGTCGCAAATCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: RVELEDKIRMRFCDVLRNRGQPP*CRKSRH
Trigger: GTGCCGAGATTTGCGACAGCAAGGGGGTTGTCCACG...GTTCCTCAGTACATCACAGAATCTCATCCTGATTTTATCCTCTAGCTCTACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACTTCAGTTACAGAATCTaGAGAGGGCCCAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHFSYRI*RGPSSI
Trigger: AATGCTGCTGGGCCCTCTGCAGATTCTGTAACTGAA...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp TCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAGTAATGAGTCTGAGTGTGGTACTGTaGCCACTGATCTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: STSVAWPKHWPLSEEVMSLSVVL*PLIWLS
Trigger: AGAAAGCCAGATCAGTGGGCACAGTACCACACTCAG...ACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAACCTGCACAGGCATTGTaGAAGCTGGATGCTCGGGTT +
Preference number: 4 (lower is better)
Translates to: EENGFSAWALIEGGMAMKPAQAL*KLDARV
Trigger: AACCCGAGCATCCAGCTTCCACAATGCCTGTGCAGG...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTCGGCTCAGTGCACTCTaGTTCAAGCTAGCTACACCT +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFRLSAL*FKLATP
Trigger: AGGTGTAGCTAGCTTGAACCAGAGTGCACTGAGCCG...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAACAGCGGCCCATAGATTaGCAGACAACTGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: EENGFSAWALIEGGMAMKQRPID*QTTAEG
Trigger: ACCCTCAGCAGTTGTCTGCCAATCTATGGGCCGCTG...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGACAGCGGCCCATAGATTaGCAGACAACTGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRQRPID*QTTAEG
Trigger: ACCCTCAGCAGTTGTCTGCCAATCTATGGGCCGCTG...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp ATCTTGCTCTGTCGTCCACACAGGAGTATAGTGGCGCCATCTCGGCTCACTGCAACAATTGTCAATTCCTaGACACTCTTTGCAAATGAC +
Preference number: 4 (lower is better)
Translates to: ILLCRPHRSIVAPSRLTATIVNS*TLFAND
Trigger: GTCATTTGCAAAGAGTGTCCAGGAATTGACAATTGT...TGCAGTGAGCCGAGATGGCGCCACTATACTCCTGTGTGGACGACAGAGCAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp GGTGATGGGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAATAGTATCCTGTCTGTaGGTACTGTGGGACTTCAAA +
Preference number: 4 (lower is better)
Translates to: GDGEATCIANRHWEWLAKIVSCL*VLWDFK
Trigger: TTTGAAGTCCCACAGTACCCACAGACAGGATACTAT...TTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTACTCTGGAACGTTATTaGACCTCACAAAGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSTLERY*TSQSEE
Trigger: TTCCTCGCTTTGTGAGGTCCAATAACGTTCCAGAGT...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCGATCGGCATATGGCATaGAAGCAGGTGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCDRHMA*KQVGGR
Trigger: CCTCCCTCCCACCTGCTTCCATGCCATATGCCGATC...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCACATTCCAGAAGGTACTaGAGGAACTGGTCCATACGG +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSHSRRY*RNWSIR
Trigger: CCGTATGGACCAGTTCCTCCAGTACCTTCTGGAATG...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGAATAATGTCATCTCGTTaGTACATAGGTGGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGIMSSR*YIGGRQ
Trigger: CTGGCGCCCACCTATGTACCAACGAGATGACATTAT...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGACTGTACGGGAAGATCTaGAAATCGCACCCCATTTTG +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGLYGKI*KSHPIL
Trigger: CAAAATGGGGTGCGATTTCCAGATCTTCCCGTACAG...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAGTAATGAGTTGCTCTTTGGTGCTGCTGTACTaGATGCCCATTTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: SVAWPKHWPLSEEVMSCSLVLLY*MPIFHC
Trigger: GCAGTGGAAAATGGGCATCCAGTACAGCAGCACCAA...AGAGCAACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp TCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAGTAATGAGTTTTGGTGGCTCCTTTTaGTGCTGCTGTACTGGATGC +
Preference number: 4 (lower is better)
Translates to: STSVAWPKHWPLSEEVMSFGGSF*CCCTGC
Trigger: GCATCCAGTACAGCAGCACCAAAAGGAGCCACCAAA...ACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACCTGTTTCTTCTGCTTTaGTGGCTCCTTTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHLFLLL*WLLLVL
Trigger: CAGCACCAAAAGGAGCCACCAAAGCAGAAGAAACAG...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTAATAGACACTGGGAGTaGCTGGCTAAAGCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSNRHWE*LAKARS
Trigger: ACTTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATT...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAGCAAGAAAGAGTCCACAGGAAATaGATGCCCCCAGTAATATCT +
Preference number: 4 (lower is better)
Translates to: GRQLALLIDTGSGWLKQERVHRK*MPPVIS
Trigger: AGATATTACTGGGGGCATCCATTTCCTGTGGACTCT...TTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR TCA 90 bp ATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGCATCAATATCTGTGTTaGTGGCAGTCTGGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: IQGIPLLLHGQSIGLSLKHQYLC*WQSGQK
Trigger: CTTTTGACCAGACTGCCATCAACACAGATATTGATG...CTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCTGCATGTGTGATTTATaGGCCAAATCACCATACAAA +
Preference number: 4 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLCMCDL*AKSPYK
Trigger: TTTGTATGGTGATTTGGCTCATAAATCACACATGCA...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGGGCCCAGCAGCATTCTaGCCATTAGCGCCAACCTTT +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQGPAAF*PLAPTF
Trigger: AAAGGTTGGCGCTAATGGTCAGAATGCTGCTGGGCC...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp ATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAAGCTGAAAGCACCTaGTTCTTTTGCCAAGTCATC +
Preference number: 4 (lower is better)
Translates to: IQGIPLLLHGQSIGLSLKKAEST*FFCQVI
Trigger: GATGACTTGGCAAAAGAATCAGGTGCTTTCAGCTTT...CTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp GACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTTTATCAGTCACCTTATaGGCATGTTCATTAAGACAG +
Preference number: 4 (lower is better)
Translates to: DGLHPGNSTSVAWPKHWPLSVTL*ACSLRQ
Trigger: CTGTCTTAATGAACATGCTCATAAGGTGACTGATAA...AGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGAAGGAGTTACAGTAAGTaGTCCCATCAAGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGRSYSK*SHQASS
Trigger: TGAAGAGGCTTGATGGGATCACTTACTGTAACTCCT...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACGTAGAGACTCAAGTGTaGAGAAAACAGCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHVETQV*RKQLCH
Trigger: GTGGCAAAGCTGTTTTCTTCACACTTGAGTCTCTAC...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373670.5
CDS-3UTR GCA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAACATTGGACGGCTCAGTaGACTCTGGTTCAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: EENGFSAWALIEGGMAMKHWTAQ*TLVQAS
Trigger: GCTAGCTTGAACCAGAGTGCACTGAGCCGTCCAATG...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTGTCACCAGTTTCCTTTaGATTGGACGGCTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFVTSFL*IGRLSA
Trigger: TGCACTGAGCCGTCCAATGCAAAGGAAACTGGTGAC...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCTCCAAGGGAACGAGCTaGTCGCATGGCTCTTACACG +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCSKGTS*SHGSYT
Trigger: CGTGTAAGAGCCATGCGAGCAGCTCGTTCCCTTGGA...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACGGGCATCATGTTCTCTaGGTAATGCTTCATAACTCC +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHGHHVL*VMLHNS
Trigger: GGAGTTATGAAGCATTACGCAGAGAACATGATGCCC...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp ATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGGGGTCACCTGTTCGTTaGAAAACAATTGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: IQGIPLLLHGQSIGLSLKGSPVR*KTIVNS
Trigger: GGAATTGACAATTGTTTTGCAACGAACAGGTGACCC...CTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR GCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATCGTGGACAACCCCCTTaGTGTCGCAAATCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHRGQPP*CRKSRH
Trigger: GTGCCGAGATTTGCGACAGCAAGGGGGTTGTCCACG...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAAAGAGTCTTGCTCTGCTaGCCGGGTTGGAATACAGTG +
Preference number: 4 (lower is better)
Translates to: EENGFSAWALIEGGMAMKRVLLC*PGWNTV
Trigger: CACTGTATTCCAACCCGGGCAGCAGAGCAAGACTCT...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAATTTGAGACAGAGTCTTaGTCTGCTGCCCGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: EENGFSAWALIEGGMAMKFETES*SAARVG
Trigger: TCCAACCCGGGCAGCAGAGCAAGACTCTGTCTCAAA...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTGGCGCCAGATGCGCCTaGTGTCGTACACAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSGARCA*CRTQEH
Trigger: ATGCTCCTGTGTACGACAGCAGGCGCATCTGGCGCC...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCAGGCTTTCTTCTTATCTaGTCCTCGCAACTGGTCTTC +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSGFLLI*SSQLVF
Trigger: GAAGACCAGTTGCGAGGAGCAGATAAGAAGAAAGCC...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAGCAAGAAGAAGAAGTAATGAGTTaGTCTTGGCCTGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: GRQLALLIDTGSGWLKQEEEVMS*SWPAEV
Trigger: AACTTCAGCAGGCCAAGAGCAACTCATTACTTCTTC...TTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR GCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCAGAATTCCACTTCTGTTaGATGGCCAAAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSEFHFC*MAKALA
Trigger: GGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTC...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAGTAATGAGTGAATTCCACTTCTGTTaGATGGCCAAAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: STSVAWPKHWPLSEEVMSEFHFC*MAKALA
Trigger: GGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTC...ACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
CDS-3UTR GCA 90 bp TCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAGTAATGAGTTGCTCTTGCTGCTGTACTGGATaGCCATTTTCCACTGCCATT +
Preference number: 4 (lower is better)
Translates to: SVAWPKHWPLSEEVMSCSCCCTG*PFSTAI
Trigger: AATGGCAGTGGAAAATGGGCATCCAGTACAGCAGCA...AGAGCAACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR GCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTGGCTCCTTTTGGTGCTaGTGTACTGGATGCCCATTT +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFGSFWC*CTGCPF
Trigger: AAATGGGCATCCAGTACAGCAGCACCAAAAGGAGCC...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000454740.5
ENST00000498479.5
CDS-3UTR GCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGGGTGGCTCCTTTTGGTaGTGCTGTACTGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQGGSFW*CCTGCP
Trigger: TGGGCATCCAGTACAGCAGCACCAAAAGGAGCCACC...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GGTGATGGGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAAAGTCAAGGCTACTGTaGTGTTGTTATGCTACAAAC +
Preference number: 4 (lower is better)
Translates to: GDGEATCIANRHWEWLAKKSRLL*CCYATN
Trigger: GTTTGTAGCATAACAACAGCACAGTAGCCTTGACTT...TTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR GCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTCGCCTTGTATTCCCTTaGCAGCAAAGGGATACAAGG +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFRLVFP*QQRDTR
Trigger: CCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCG...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAAAGGCATTGTGGAAGCTaGATGCTCGGGTTAGCAGTC +
Preference number: 4 (lower is better)
Translates to: EENGFSAWALIEGGMAMKRHCGS*MLGLAV
Trigger: GACTGCTAACCCGAGCATCCAGCTTCCACAATGCCT...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCATGGGCTCCAACTAACTaGAGAAGTGCGAAGTTGACA +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSWAPTN*RSAKLT
Trigger: TGTCAACTTCGCACTTCTCCAGTTAGTTGGAGCCCA...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTCAGTTTCCTTTGCATTaGACGGCTCAGTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFQFPLH*TAQCTL
Trigger: CAGAGTGCACTGAGCCGTCCAATGCAAAGGAAACTG...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp TCAGGTATGGACAAGCTGAATGTATTTCCTGGAGTCTCCCAAATTATCTTGATGGCTGGCCCTAAAAACTaGCATCCTCGAGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: SGMDKLNVFPGVSQIILMAGPKN*HPRALT
Trigger: TGTCAGGGCTCGAGGATGCCAGTTTTTAGGGCCAGC...CATCAAGATAATTTGGGAGACTCCAGGAAATACATTCAGCTTGTCCATACCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTATAGTATCCTGTCTGTaGGTACTGTGGGACTTCAAA +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSIVSCL*VLWDFK
Trigger: TTTGAAGTCCCACAGTACCCACAGACAGGATACTAT...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACACTCTGGAACGTTATTaGACCTCACAAAGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHTLERY*TSQSEE
Trigger: TTCCTCGCTTTGTGAGGTCCAATAACGTTCCAGAGT...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCTGTCCTTGGCTCACTTaGTGGCTGACAAGCCACCGA +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCCPWLT*WLTSHR
Trigger: TCGGTGGCTTGTCAGCCACCAAGTGAGCCAAGGACA...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTTGGGCTCTGAATCAATaGCATTTATACAGGAGCCTA +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSWALNQ*HLYRSL
Trigger: TAGGCTCCTGTATAAATGCCATTGATTCAGAGCCCA...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAGTAATGAGTTGCTCTCTGTACGGGAAGATCTaGAAATCGCACCCCATTTTG +
Preference number: 4 (lower is better)
Translates to: SVAWPKHWPLSEEVMSCSLYGKI*KSHPIL
Trigger: CAAAATGGGGTGCGATTTCCAGATCTTCCCGTACAG...AGAGCAACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
CDS-3UTR CCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGATTAGTCGCACTTCCTTaGGAAGCAGTGGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRLVALP*EAVAWT
Trigger: TGTCCAGGCCACTGCTTCCCAAGGAAGTGCGACTAA...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAGTAATGAGTTGCTCTGCATGGCCAAAGCATTaGCCTCTCTCTGAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: SVAWPKHWPLSEEVMSCSAWPKH*PLSEEV
Trigger: TACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGC...AGAGCAACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
CDS-3UTR CCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTTTTGGTGGCTCCTTTTaGTGCTGCTGTACTGGATGC +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFFGGSF*CCCTGC
Trigger: GCATCCAGTACAGCAGCACCAAAAGGAGCCACCAAA...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTTCCTCCAGAATCACATaGTCTTCACCTAAACTCTGT +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSSSRIT*SSPKLC
Trigger: ACAGAGTTTAGGTGAAGACCATGTGATTCTGGAGGA...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp ACATTAGAGGGCCCAGCTGAGGTAGCTGCTACATTACTTACAGGAGTCTTGGGTTCCTCCAGAATCACATaGTCTTCACCTAAACTCTGT +
Preference number: 4 (lower is better)
Translates to: TLEGPAEVAATLLTGVLGSSRIT*SSPKLC
Trigger: ACAGAGTTTAGGTGAAGACCATGTGATTCTGGAGGA...ACCCAAGACTCCTGTAAGTAATGTAGCAGCTACCTCAGCTGGGCCCTCTAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACAATAGACACTGGGAGTaGCTGGCTAAAGCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHNRHWE*LAKARS
Trigger: ACTTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATT...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp GGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAGCAAGAAGCAGCTGGAATGAGATaGAAACTTCTCTCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: GRQLALLIDTGSGWLKQEAAGMR*KLLSVK
Trigger: TTTCACTGAGAGAAGTTTCCATCTCATTCCAGCTGC...TTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTGTGGCAGAGAACCAATaGCTTTACTTCACATTAAGC +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSVAENQ*LYFTLS
Trigger: GCTTAATGTGAAGTAAAGCCATTGGTTCTCTGCCAC...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR CAA 72 bp CAAATGTGGGGTGTTTTGATCTGTGGTCTTGACGCCTaGTATTCCCTTGCCAGCAAAGGGATACAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: QMWGVLICGLDA*YSLASKGIQGR
Trigger: TCTTCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAAAACACCCCACATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACGGACAAGCTTTTCGATaGAGTTTATTCAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHGQAFR*SLFKQV
Trigger: GACCTGCTTGAATAAACTTCATCGAAAAGCTTGTCC...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp ACATTAGAGGGCCCAGCTGAGGTAGCTGCTACATTACTTACAGGAGTCTTGGGTCTTGTTTTTGATGCCTaGGGAAATCTTGGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: TLEGPAEVAATLLTGVLGLVFDA*GNLGSS
Trigger: ACTAGAACCAAGATTTCCTCAGGCATCAAAAACAAG...ACCCAAGACTCCTGTAAGTAATGTAGCAGCTACCTCAGCTGGGCCCTCTAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTACCAATACTTGTTTTTaGTGCCTGAGGAAATCTTGG +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSTNTCF*CLRKSW
Trigger: CCAAGATTTCCTCAGGCATCAAAAACAAGTATTGGT...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp CAAGAGGTGCTTTCTGAGTGTGGTACTGTGCCCACTGATCTGGCTTTCTTCTTAGCTTCCATGGCAATATaGACAATTTGGGCATCATGT +
Preference number: 4 (lower is better)
Translates to: QEVLSECGTVPTDLAFFLASMAI*TIWASC
Trigger: ACATGATGCCCAAATTGTTCATATTGCCATGGAAGC...TAAGAAGAAAGCCAGATCAGTGGGCACAGTACCACACTCAGAAAGCACCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp AGAGTAGAGCTAGAGGATAAAATCAGGATGAGATTCTGTGATGTACTGAGGAACCTGCTCCCAAGTTGGTaGAACAGCGTCTGGATTAGG +
Preference number: 4 (lower is better)
Translates to: RVELEDKIRMRFCDVLRNLLPSW*NSVWIR
Trigger: CCTAATCCAGACGCTGTTTCACCAACTTGGGAGCAG...GTTCCTCAGTACATCACAGAATCTCATCCTGATTTTATCCTCTAGCTCTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGCTGCTCCCAAGTTGGTaGAACAGCGTCTGGATTAGG +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQLLPSW*NSVWIR
Trigger: CCTAATCCAGACGCTGTTTCACCAACTTGGGAGCAG...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTTTCCGGCTGTGGTTGTaGCAGTGTTGTTTACACCAA +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFFRLWL*QCCLHQ
Trigger: TTGGTGTAAACAACACTGTCACAACCACAGCCGGAA...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCACAAGAGGTGCTTTCTaGGTGTGGTACTGTGCCCAC +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCTRGAF*VWYCAH
Trigger: GTGGGCACAGTACCACACTCAGAAAGCACCTCTTGT...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTAATCGCACCCCATTTTaGGATGATGGGTCCATCACT +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFNRTPF*DDGSIT
Trigger: AGTGATGGACCCATCATCTCAAAATGGGGTGCGATT...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTATAAGGGACATAATCTaGTACACTGATGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSIRDII*YTDGLS
Trigger: ACTAAGCCCATCAGTGTATCAGATTATGTCCCTTAT...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GGTGATGGGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAACTGGAATGCTTTCTATaGCCAGATAAATCAGTAACA +
Preference number: 4 (lower is better)
Translates to: GDGEATCIANRHWEWLAKLECFL*PDKSVT
Trigger: TGTTACTGATTTATCTGGTCATAGAAAGCATTCCAG...TTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR TCA 90 bp ATGAGGTTGCCAGCACTGACAGATGTGGTGATGGGGAGGCAACTTGCATTGCTACACAAATTTGAAAGATaGACCTCCTTTCAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: MRLPALTDVVMGRQLALLHKFER*TSFQLL
Trigger: TAACAGCTGAAAGGAGGTTCATCTTTCAAATTTGTG...TAGCAATGCAAGTTGCCTCCCCATCACCACATCTGTCAGTGCTGGCAACCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR TCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTCACAACTTTCATGTATaGCACTGGTTTATCACATGG +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSHNFHV*HWFITW
Trigger: CCATGTGATAAACCAGTGTCATACATGAAAGTTGTG...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTAGTCTGCTCCAAAAATaGCTCAAAGAAGATAGGGAA +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSSLLQK*LKEDRE
Trigger: TTCCCTATCTTCTTTGAGTCATTTTTGGAGCAGACT...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCAAACTGATGGGTTTGTaGACATTCTCATCAAATTCA +
Preference number: 4 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLKLMGL*TFSSNS
Trigger: TGAATTTGATGAGAATGTGCACAAACCCATCAGTTT...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGAATTGCATTTTCCAGCTaGTCCCAAGTTGGTGAAACA +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGIAFSS*SQVGET
Trigger: TGTTTCACCAACTTGGGAGCAGCTGGAAAATGCAAT...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTCGTGGACAACCCCCTTaGTGTCGCAAATCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSRGQPP*CRKSRH
Trigger: GTGCCGAGATTTGCGACAGCAAGGGGGTTGTCCACG...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAACGTGGACAACCCCCTTaGTGTCGCAAATCTCGGCAC +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKRGQPP*CRKSRH
Trigger: GTGCCGAGATTTGCGACAGCAAGGGGGTTGTCCACG...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp AGAGTAGAGCTAGAGGATAAAATCAGGATGAGATTCTGTGATGTACTGAGGAACCTCAAGGTATCCTCCTaGCTTTGCCTCCCAAACTGC +
Preference number: 4 (lower is better)
Translates to: RVELEDKIRMRFCDVLRNLKVSS*LCLPNC
Trigger: GCAGTTTGGGAGGCAAAGGCAGGAGGATACCTTGAG...GTTCCTCAGTACATCACAGAATCTCATCCTGATTTTATCCTCTAGCTCTACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTATGATGTGGCCTCGTTaGCATATGAACTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFMMWPR*HMNSTL
Trigger: CAAGGTGGAGTTCATATGGCAACGAGGCCACATCAT...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000454740.5
ENST00000498479.5
CDS-3UTR GCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATGGTGGCTCCTTTTGGTaGTGCTGTACTGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHGGSFW*CCTGCP
Trigger: TGGGCATCCAGTACAGCAGCACCAAAAGGAGCCACC...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGAAAATGGCTCAGTTACTaGACCGGATTGCTACAAACT +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGKWLSY*TGLLQT
Trigger: AGTTTGTAGCAATCCGGTGCAGTAACTGAGCCATTT...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACCATCTTGTTAGTCAGTaGAAACGCTACATACAGGGT +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHHLVSQ*KRYIQG
Trigger: ACCCTGTATGTAGCGTTTGCACTGACTAACAAGATG...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGAACCACAGTAACTGAATaGGGCACATGGATTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGTTVTE*GTWISE
Trigger: TTCTGAAATCCATGTGCCGCATTCAGTTACTGTGGT...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGAAAAGGCAAGGGAATCTaGTTTGTTCAGGTACCAACT +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGKGKGI*FVQVPT
Trigger: AGTTGGTACCTGAACAAAGCAGATTCCCTTGCCTTT...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCAGGAAGGAAAAATCAGTaGCACTGGCCTAATGAACTC +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSGRKNQ*HWPNEL
Trigger: GAGTTCATTAGGCCAGTGGCACTGATTTTTCCTTCC...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTTTTGGCAGTACTAAGTaGAGCCAGTGTCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFFGSTK*SQCLCS
Trigger: GGAACACAGACACTGGCTGCACTTAGTACTGCCAAA...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TCAGGTATGGACAAGCTGAATGTATTTCCTGGAGTCTCCCAAATTATCTTGATGCGGCTCAGTGCACTCTaGTTCAAGCTAGCTACACCT +
Preference number: 4 (lower is better)
Translates to: SGMDKLNVFPGVSQIILMRLSAL*FKLATP
Trigger: AGGTGTAGCTAGCTTGAACCAGAGTGCACTGAGCCG...CATCAAGATAATTTGGGAGACTCCAGGAAATACATTCAGCTTGTCCATACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAACAGTTTCCTTTGCATTaGACGGCTCAGTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: EENGFSAWALIEGGMAMKQFPLH*TAQCTL
Trigger: CAGAGTGCACTGAGCCGTCCAATGCAAAGGAAACTG...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAAACGAGCTGCTCGCATaGCTCTTACACGACCTTCTT +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRNELLA*LLHDLL
Trigger: AAGAAGGTCGTGTAAGAGCCATGCGAGCAGCTCGTT...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAACAGCGGCCCATAGATTaGCAGACAACTGCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKQRPID*QTTAEG
Trigger: ACCCTCAGCAGTTGTCTGCCAATCTATGGGCCGCTG...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp CCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTACTTACAGGAGTCTTaGGTGGAGAACCAATTTTAT +
Preference number: 4 (lower is better)
Translates to: PSSREFHFCCMAKALASLYLQES*VENQFY
Trigger: ATAAAATTGGTTCTCCACCCAAGACTCCTGTAAGTA...GAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTTGTCTGTGGGTACTGTaGGACTTCAAAGGGTATCTG +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFCLWVL*DFKGYL
Trigger: CAGATACCCTTTGAAGTCCCACAGTACCCACAGACA...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGATCGGCATATGGCATaGAAGCAGGTGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKDRHMA*KQVGGR
Trigger: CCTCCCTCCCACCTGCTTCCATGCCATATGCCGATC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAAGGTACTGGAGGAACTaGTCCATACGGCTGCGGAGG +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPRYWRN*SIRLRR
Trigger: CCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCT...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCATCGTTGGTACATAGGTaGGCGCCAGATGCGCCTGCT +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPSLVHR*APDAPA
Trigger: AGCAGGCGCATCTGGCGCCCACCTATGTACCAACGA...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAATGTCCTTGGCTCACTTaGTGGCTGACAAGCCACCGA +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKCPWLT*WLTSHR
Trigger: TCGGTGGCTTGTCAGCCACCAAGTGAGCCAAGGACA...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTTCTGCTCCTCGCAACTaGTCTTCAAATGACCACAAG +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFSAPRN*SSNDHK
Trigger: CTTGTGGTCATTTGAAGACCAGTTGCGAGGAGCAGA...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACTGGGCTCTGAATCAATaGCATTTATACAGGAGCCTA +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHWALNQ*HLYRSL
Trigger: TAGGCTCCTGTATAAATGCCATTGATTCAGAGCCCA...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp GCAGCAGAAAACAAATACATTAAGCATGAAGCCGAAAGGTTCAGTTTCTTTACCTTCCTTGGGAAGCAGTaGCCTGGACAGGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: AAENKYIKHEAERFSFFTFLGKQ*PGQDLW
Trigger: CCACAGATCCTGTCCAGGCCACTGCTTCCCAAGGAA...GGTAAAGAAACTGAACCTTTCGGCTTCATGCTTAATGTATTTGTTTTCTGCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398671.2
CDS-3UTR CCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTAGTGTGCTGATGATGTaGCCTCGTTGCCATATGAAC +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFSVLMM*PRCHMN
Trigger: GTTCATATGGCAACGAGGCCACATCATCAGCACACT...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTGCATGGCCAAAGCATTaGCCTCTCTCTGAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFAWPKH*PLSEEV
Trigger: TACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGC...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTCAAGATCTCTTCAATTaGTTCACTTTGTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSQDLFN*FTLSIR
Trigger: CCTGATGGACAAAGTGAACCAATTGAAGAGATCTTG...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGATTGGTGCTGCTGTACTaGATGCCCATTTTCCACTGC +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRLVLLY*MPIFHC
Trigger: GCAGTGGAAAATGGGCATCCAGTACAGCAGCACCAA...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTCTGTTTCTTCTGCTTTaGTGGCTCCTTTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFLFLLL*WLLLVL
Trigger: CAGCACCAAAAGGAGCCACCAAAGCAGAAGAAACAG...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGATCCTCCAGAATCACATaGTCTTCACCTAAACTCTGT +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGSSRIT*SSPKLC
Trigger: ACAGAGTTTAGGTGAAGACCATGTGATTCTGGAGGA...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCAATTGCTAATAGACACTaGGAGTGGCTGGCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSIANRH*EWLAKA
Trigger: TGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAAT...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCACCCTTTCTTCGAAAGTaGCAGAGAACCAATGGCTTT +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSPFLRK*QRTNGF
Trigger: AAAGCCATTGGTTCTCTGCCACTTTCGAAGAAAGGG...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAAGAAATTCTGTCCATTaGGCTGCCTGCACAGGCATT +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRRNSVH*AACTGI
Trigger: AATGCCTGTGCAGGCAGCTCAATGGACAGAATTTCT...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCACATCAATATCTGTGTTaGTGGCAGTCTGGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSHQYLC*WQSGQK
Trigger: CTTTTGACCAGACTGCCATCAACACAGATATTGATG...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGTTGGCAGACAACTGCTaGGGGTTCTGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQLADNC*GFWCCN
Trigger: ATTACAGCACCAGAACCCTCAGCAGTTGTCTGCCAA...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCAGCAAGAAGCTCTAAATaGGGCCTCAGTCTATTTAAG +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSARSSK*GLSLFK
Trigger: CTTAAATAGACTGAGGCCTCATTTAGAGCTTCTTGC...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp TCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAGTAATGAGTTGCTCTGCAAGAAGCTCTAAATaGGGCCTCAGTCTATTTAAG +
Preference number: 4 (lower is better)
Translates to: SVAWPKHWPLSEEVMSCSARSSK*GLSLFK
Trigger: CTTAAATAGACTGAGGCCTCATTTAGAGCTTCTTGC...AGAGCAACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp AGAGTAGAGCTAGAGGATAAAATCAGGATGAGATTCTGTGATGTACTGAGGAACAGCCTGGGCACTAATTaGGGGTGGAATGGCAATGAA +
Preference number: 4 (lower is better)
Translates to: RVELEDKIRMRFCDVLRNSLGTN*GWNGNE
Trigger: TTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCT...GTTCCTCAGTACATCACAGAATCTCATCCTGATTTTATCCTCTAGCTCTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp AGAGTAGAGCTAGAGGATAAAATCAGGATGAGATTCTGTGATGTACTGAGGAACCTGGGAATACAGGCATaGGCCACTACACCTAGTTTG +
Preference number: 4 (lower is better)
Translates to: RVELEDKIRMRFCDVLRNLGIQA*ATTPSL
Trigger: CAAACTAGGTGTAGTGGCTCATGCCTGTATTCCCAG...GTTCCTCAGTACATCACAGAATCTCATCCTGATTTTATCCTCTAGCTCTACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp GGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAGCAAGAATTGAATCAACAGCATTaGCATAAGGGACATAATCTG +
Preference number: 4 (lower is better)
Translates to: GRQLALLIDTGSGWLKQELNQQH*HKGHNL
Trigger: CAGATTATGTCCCTTATGTCAATGCTGTTGATTCAA...TTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCTTGCTCTTGGCCTGCTaGAGTTCAAGGCTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCLLLAC*SSRLKR
Trigger: CCTTTTGAGCCTTGAACTTCAGCAGGCCAAGAGCAA...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGAGGTTTAAGGTAAGGTaGCGGCCTTCATCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQRFKVR*RPSSRE
Trigger: TTCCCTGGATGAAGGCCGTCACCTTACCTTAAACCT...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTTTTTCTCAAGAAAGCTaGAAGCACCTGATTCTTTTG +
Preference number: 4 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSFSQES*KHLILL
Trigger: CAAAAGAATCAGGTGCTTTCAGCTTTCTTGAGAAAA...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCACATTAAGCCCACCATaGCAGACAGAAGGTGACCAC +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCTLSPP*QTEGDH
Trigger: GTGGTCACCTTCTGTCTGTCATGGTGGGCTTAATGT...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAAAATGTGGGGTGTTTTaGTCTGTGGTCTTGACGCCT +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRKCGVF*SVVLTP
Trigger: AGGCGTCAAGACCACAGATCAAAACACCCCACATTT...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGACCTTGGGTTATAAAGTaGGGCCTAATTCTCGACAGG +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRPWVIK*GLILDR
Trigger: CCTGTCGAGAATTAGGCCTCACTTTATAACCCAAGG...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTAACAGCTTTGCCACCTaGAAGAGGAAATCTCTGACA +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFNSFAT*KRKSLT
Trigger: TGTCAGAGATTTCCTCTTTCAGGTGGCAAAGCTGTT...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373670.5
CDS-3UTR GCA 90 bp TCAGGTATGGACAAGCTGAATGTATTTCCTGGAGTCTCCCAAATTATCTTGATGTTCTGTCCATTGAGCTaGCTGCACAGGCATTGTGGA +
Preference number: 4 (lower is better)
Translates to: SGMDKLNVFPGVSQIILMFCPLS*LHRHCG
Trigger: TCCACAATGCCTGTGCAGGCAGCTCAATGGACAGAA...CATCAAGATAATTTGGGAGACTCCAGGAAATACATTCAGCTTGTCCATACCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGATATTCAAGCAGGTCTTaGAAACAGTGTGTGAACAAC +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGYSSRS*KQCVNN
Trigger: GTTGTTCACACACTGTTTGCAAGACCTGCTTGAATA...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp ATGAGGTTGCCAGCACTGACAGATGTGGTGATGGGGAGGCAACTTGCATTGCTACTCAACGCATTTCTTTaGAACCTCATAGTGTTTATT +
Preference number: 4 (lower is better)
Translates to: MRLPALTDVVMGRQLALLLNAFL*NLIVFI
Trigger: AATAAACACTATGAGGTTGCAAAGAAATGCGTTGAG...TAGCAATGCAAGTTGCCTCCCCATCACCACATCTGTCAGTGCTGGCAACCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR GCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAATCCAAGGGAACGAGCTaGTCGCATGGCTCTTACACG +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKSKGTS*SHGSYT
Trigger: CGTGTAAGAGCCATGCGAGCAGCTCGTTCCCTTGGA...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp TCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAGTAATGAGTTTTAACAGCTACCATTaGATTTTCCAGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: STSVAWPKHWPLSEEVMSFNSYH*IFQLLP
Trigger: TGGGAGCAGCTGGAAAATGCAATGGTAGCTGTTAAA...ACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR GCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCCTGAGTGTGGTACTGTaGCCACTGATCTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCLSVVL*PLIWLS
Trigger: AGAAAGCCAGATCAGTGGGCACAGTACCACACTCAG...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAGTAATGAGTTGCTCTGAAGAAGTAATGAGTTaGTCTTGGCCTGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: SVAWPKHWPLSEEVMSCSEEVMS*SWPAEV
Trigger: AACTTCAGCAGGCCAAGAGCAACTCATTACTTCTTC...AGAGCAACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
CDS-3UTR GCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGGGCTCCTTTTGGTGCTaGTGTACTGGATGCCCATTT +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQGSFWC*CTGCPF
Trigger: AAATGGGCATCCAGTACAGCAGCACCAAAAGGAGCC...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGGTGGCTCCTTTTGGTaGTGCTGTACTGGATGCCCA +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKGGSFW*CCTGCP
Trigger: TGGGCATCCAGTACAGCAGCACCAAAAGGAGCCACC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCATGTTCTTTTGTGTTCTaGTTGCAGAAGGGGTCCTTA +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSCSFVF*LQKGSL
Trigger: TAAGGACCCCTTCTGCAAGCAGAACACAAAAGAACA...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAACGGCTCAGTGCACTCTaGTTCAAGCTAGCTACACCT +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKRLSAL*FKLATP
Trigger: AGGTGTAGCTAGCTTGAACCAGAGTGCACTGAGCCG...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTGATCGGCATATGGCATaGAAGCAGGTGGGAGGGAGG +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCDRHMA*KQVGGR
Trigger: CCTCCCTCCCACCTGCTTCCATGCCATATGCCGATC...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCCATTCCAGAAGGTACTaGAGGAACTGGTCCATACGG +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCHSRRY*RNWSIR
Trigger: CCGTATGGACCAGTTCCTCCAGTACCTTCTGGAATG...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATAGGCACAGTTGTCCTTaGCTCACTTGGTGGCTGACA +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHRHSCP*LTWWLT
Trigger: TGTCAGCCACCAAGTGAGCCAAGGACAACTGTGCCT...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGACTGTGCCCACTGATCTaGCTTTCTTCTTATCTGCTC +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRLCPLI*LSSYLL
Trigger: GAGCAGATAAGAAGAAAGCCAGATCAGTGGGCACAG...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCATGGGAAGCAGTGGCCTaGACAGGATCTGTGGTATGG +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPWEAVA*TGSVVW
Trigger: CCATACCACAGATCCTGTCCAGGCCACTGCTTCCCA...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTAATAGACACTGGGAGTaGCTGGCTAAAGCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFNRHWE*LAKARS
Trigger: ACTTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATT...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCAGCAGCTGGAATGAGATaGAAACTTCTCTCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSAAGMR*KLLSVK
Trigger: TTTCACTGAGAGAAGTTTCCATCTCATTCCAGCTGC...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGAAAAAATCAGTGCCACTaGCCTAATGAACTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGKNQCH*PNELPF
Trigger: AAAAGGGAGTTCATTAGGCCAGTGGCACTGATTTTT...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTGGACAAGCTTTTCGATaGAGTTTATTCAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFGQAFR*SLFKQV
Trigger: GACCTGCTTGAATAAACTTCATCGAAAAGCTTGTCC...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp TCAGGTATGGACAAGCTGAATGTATTTCCTGGAGTCTCCCAAATTATCTTGATGTCTTCCTCCACCAGTTaGCAGTTTACAAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: SGMDKLNVFPGVSQIILMSSSTS*QFTSVT
Trigger: GGTGACACTTGTAAACTGTCAACTGGTGGAGGAAGA...CATCAAGATAATTTGGGAGACTCCAGGAAATACATTCAGCTTGTCCATACCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp AGAGTAGAGCTAGAGGATAAAATCAGGATGAGATTCTGTGATGTACTGAGGAACTACCAGAACTTTCCTTaGGAGGGCAGAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: RVELEDKIRMRFCDVLRNYQNFP*EGRTIF
Trigger: GAAGATGGTTCTGCCCTCTCAAGGAAAGTTCTGGTA...GTTCCTCAGTACATCACAGAATCTCATCCTGATTTTATCCTCTAGCTCTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGTACCAGAACTTTCCTTaGGAGGGCAGAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQYQNFP*EGRTIF
Trigger: GAAGATGGTTCTGCCCTCTCAAGGAAAGTTCTGGTA...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACTGCATGTGTGATTTATaGGCCAAATCACCATACAAA +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHCMCDL*AKSPYK
Trigger: TTTGTATGGTGATTTGGCTCATAAATCACACATGCA...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTGCAAGAAGCTCTAAATaGGGCCTCAGTCTATTTAAG +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFARSSK*GLSLFK
Trigger: CTTAAATAGACTGAGGCCTCATTTAGAGCTTCTTGC...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTCTGCTCCCAAGTTGGTaGAACAGCGTCTGGATTAGG +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSLLPSW*NSVWIR
Trigger: CCTAATCCAGACGCTGTTTCACCAACTTGGGAGCAG...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp AGAGTAGAGCTAGAGGATAAAATCAGGATGAGATTCTGTGATGTACTGAGGAACGAAAGGAGACAACAATaGAGATATAGTCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: RVELEDKIRMRFCDVLRNERRQQ*RYSPRG
Trigger: CCCCCGTGGACTATATCTTCATTGTTGTCTCCTTTC...GTTCCTCAGTACATCACAGAATCTCATCCTGATTTTATCCTCTAGCTCTACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp AGAGTAGAGCTAGAGGATAAAATCAGGATGAGATTCTGTGATGTACTGAGGAACGCTATGGCAGCATGGTaGAGGATGCAATTAACACTG +
Preference number: 4 (lower is better)
Translates to: RVELEDKIRMRFCDVLRNAMAAW*RMQLTL
Trigger: CAGTGTTAATTGCATCCTTCACCATGCTGCCATAGC...GTTCCTCAGTACATCACAGAATCTCATCCTGATTTTATCCTCTAGCTCTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCTTCCGGCTGTGGTTGTaGCAGTGTTGTTTACACCAA +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCFRLWL*QCCLHQ
Trigger: TTGGTGTAAACAACACTGTCACAACCACAGCCGGAA...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTGGCCCAGCAGCATTCTaGCCATTAGCGCCAACCTTT +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCGPAAF*PLAPTF
Trigger: AAAGGTTGGCGCTAATGGTCAGAATGCTGCTGGGCC...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGATGTCTGATAGACAGATaGGTGCATCACATCCATTGG +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRCLIDR*VHHIHW
Trigger: CCAATGGATGTGATGCACTCATCTGTCTATCAGACA...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGCAACTGGTCTTCAAATaGCCACAAGGTTCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQQLVFK*PQGSLG
Trigger: ACCAAGGGAACCTTGTGGTCATTTGAAGACCAGTTG...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTAGAAGGTGGTGTTGGTaGCTGTGTTGCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSRRWCW*LCCHRK
Trigger: CTTCCTGTGGCAACACAGTCACCAACACCACCTTCT...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATTTGCTCTTGGCCTGCTaGAGTTCAAGGCTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHLLLAC*SSRLKR
Trigger: CCTTTTGAGCCTTGAACTTCAGCAGGCCAAGAGCAA...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GCAGCAGAAAACAAATACATTAAGCATGAAGCCGAAAGGTTCAGTTTCTTTACCTTGCTCTTGGCCTGCTaGAGTTCAAGGCTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: AAENKYIKHEAERFSFFTLLLAC*SSRLKR
Trigger: CCTTTTGAGCCTTGAACTTCAGCAGGCCAAGAGCAA...GGTAAAGAAACTGAACCTTTCGGCTTCATGCTTAATGTATTTGTTTTCTGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398671.2
CDS-3UTR TCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCGCATTGGCCTCTCTCTaGAGAAGTAATGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCALASL*RSNELL
Trigger: GAGCAACTCATTACTTCTTCAGAGAGAGGCCAATGC...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACCACAAATTTGAAAGATaGACCTCCTTTCAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHHKFER*TSFQLL
Trigger: TAACAGCTGAAAGGAGGTTCATCTTTCAAATTTGTG...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACCACAAATCTGATGCATaGCTTGTTGAACACATTGTA +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHHKSDA*LVEHIV
Trigger: TACAATGTGTTCAACAAGTCATGCATCAGATTTGTG...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAAGAGGGTTCTTTCCCTaGGGGCACATAAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKRGFFP*GHIRSS
Trigger: AGAGCTCCTTATGTGCCCTCAGGGAAAGAACCCTCT...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAAGAGGGTTCTTTCCCTaGGGGCACATAAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPRGFFP*GHIRSS
Trigger: AGAGCTCCTTATGTGCCCTCAGGGAAAGAACCCTCT...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGATACAACCACAGTAACTaGATGCGGCACATGGATTTC +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRYNHSN*MRHMDF
Trigger: GAAATCCATGTGCCGCATTCAGTTACTGTGGTTGTA...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp ACATTAAGCATGAAGCCGAAAGGTTCAGTTTCTTTACCTCTCCATTTCTTAGTTGGCCTCGTTGCCATATaGACTCCACCTGATACACTG +
Preference number: 4 (lower is better)
Translates to: TLSMKPKGSVSLPLHFLVGLVAI*TPPDTL
Trigger: CAGTGTATCAGGTGGAGTTCATATGGCAACGAGGCC...AACTAAGAAATGGAGAGGTAAAGAAACTGAACCTTTCGGCTTCATGCTTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398671.2
CDS-3UTR GCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAGGGCATCATGTTCTCTaGGTAATGCTTCATAACTCC +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRGHHVL*VMLHNS
Trigger: GGAGTTATGAAGCATTACGCAGAGAACATGATGCCC...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGTTCAGTTACAGAATCTaGAGAGGGCCCAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQFSYRI*RGPSSI
Trigger: AATGCTGCTGGGCCCTCTGCAGATTCTGTAACTGAA...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGTGCTGCTGTACTGGATaGCCATTTTCCACTGCCATT +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQCCCTG*PFSTAI
Trigger: AATGGCAGTGGAAAATGGGCATCCAGTACAGCAGCA...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCTGCTGCTGTACTGGATaGCCATTTTCCACTGCCATT +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCCCCTG*PFSTAI
Trigger: AATGGCAGTGGAAAATGGGCATCCAGTACAGCAGCA...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAGTAATGAGTGTTACTGCACCGGATTaGTACAAACTCATAAAAAGC +
Preference number: 4 (lower is better)
Translates to: STSVAWPKHWPLSEEVMSVTAPD*YKLIKS
Trigger: GCTTTTTATGAGTTTGTAGCAATCCGGTGCAGTAAC...ACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR GCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACTTTTATGGGATCACCTaGTGCAAGACAAGCATTATT +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHFYGIT*CKTSII
Trigger: AATAATGCTTGTCTTGCAGCAGGTGATCCCATAAAA...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAAAGGATCAGATGAACTaGCCTTTCTTCGAAAGTGGC +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRKDQMN*PFFESG
Trigger: GCCACTTTCGAAGAAAGGGCAGTTCATCTGATCCTT...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTTGTTCTTTTGTGTTCTaGTTGCAGAAGGGGTCCTTA +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFCSFVF*LQKGSL
Trigger: TAAGGACCCCTTCTGCAAGCAGAACACAAAAGAACA...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATCGCCTTGTATTCCCTTaGCAGCAAAGGGATACAAGG +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHRLVFP*QQRDTR
Trigger: CCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCG...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAAATGCAGACAGCAGTTaGTGCAAGCTAACCACGATA +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRNADSS*CKLTTI
Trigger: TATCGTGGTTAGCTTGCAGCAACTGCTGTCTGCATT...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAAGGCATTGTGGAAGCTaGATGCTCGGGTTAGCAGTC +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPRHCGS*MLGLAV
Trigger: GACTGCTAACCCGAGCATCCAGCTTCCACAATGCCT...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAAGGCATTGTGGAAGCTaGATGCTCGGGTTAGCAGTC +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKRHCGS*MLGLAV
Trigger: GACTGCTAACCCGAGCATCCAGCTTCCACAATGCCT...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp AGAGTAGAGCTAGAGGATAAAATCAGGATGAGATTCTGTGATGTACTGAGGAACTGGGCTCCAACTAACTaGAGAAGTGCGAAGTTGACA +
Preference number: 4 (lower is better)
Translates to: RVELEDKIRMRFCDVLRNWAPTN*RSAKLT
Trigger: TGTCAACTTCGCACTTCTCCAGTTAGTTGGAGCCCA...GTTCCTCAGTACATCACAGAATCTCATCCTGATTTTATCCTCTAGCTCTACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATAACGAGCTGCTCGCATaGCTCTTACACGACCTTCTT +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHNELLA*LLHDLL
Trigger: AAGAAGGTCGTGTAAGAGCCATGCGAGCAGCTCGTT...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGAACAATTGTCAATTCCTaGACACTCTTTGCAAATGAC +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGTIVNS*TLFAND
Trigger: GTCATTTGCAAAGAGTGTCCAGGAATTGACAATTGT...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAACGGGTTGGAATACAGTaGTATAATCTCAGTTCACGG +
Preference number: 4 (lower is better)
Translates to: EENGFSAWALIEGGMAMKRVGIQ*YNLSSR
Trigger: CCGTGAACTGAGATTATACCACTGTATTCCAACCCG...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp TCAGGTATGGACAAGCTGAATGTATTTCCTGGAGTCTCCCAAATTATCTTGATGATGTATGGAGTGCTATaGCAGCATGGTGAAGGATGC +
Preference number: 4 (lower is better)
Translates to: SGMDKLNVFPGVSQIILMMYGVL*QHGEGC
Trigger: GCATCCTTCACCATGCTGCCATAGCACTCCATACAT...CATCAAGATAATTTGGGAGACTCCAGGAAATACATTCAGCTTGTCCATACCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp ACATTAGAGGGCCCAGCTGAGGTAGCTGCTACATTACTTACAGGAGTCTTGGGTAATTCCGTTTGTACTTaGAACAATTTTCCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: TLEGPAEVAATLLTGVLGNSVCT*NNFPCC
Trigger: ACAACAGGGAAAATTGTTCCAAGTACAAACGGAATT...ACCCAAGACTCCTGTAAGTAATGTAGCAGCTACCTCAGCTGGGCCCTCTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTCTACGTGAGATTAGCTaGGAAACACTGTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFLREIS*ETLFSA
Trigger: TGCAGAAAACAGTGTTTCCCAGCTAATCTCACGTAG...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACGGGTATCTGAGTCCTTaGATCTTGAAAATACTGAAT +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHGYLSP*ILKILN
Trigger: ATTCAGTATTTTCAAGATCCAAGGACTCAGATACCC...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATTACCGTTGGAGGTGGTaGATAGTATCCTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHYRWRW*IVSCLW
Trigger: CCACAGACAGGATACTATCCACCACCTCCAACGGTA...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAACCAGCTGGTACCGTTaGAGGTGGTGGATAGTATCC +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPTSWYR*RWWIVS
Trigger: GGATACTATCCACCACCTCCAACGGTACCAGCTGGT...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAATGGGAGGGAGGACTCTaGAACGTTATTGGACCTCAC +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKWEGGL*NVIGPH
Trigger: GTGAGGTCCAATAACGTTCCAGAGTCCTCCCTCCCA...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTTGGGAGGGAGGACTCTaGAACGTTATTGGACCTCAC +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSWEGGL*NVIGPH
Trigger: GTGAGGTCCAATAACGTTCCAGAGTCCTCCCTCCCA...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTCCTTGGCTCACTTGGTaGCTGACAAGCCACCGAATA +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSPWLTW*LTSHRI
Trigger: TATTCGGTGGCTTGTCAGCCACCAAGTGAGCCAAGG...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTAGGCACAGTTGTCCTTaGCTCACTTGGTGGCTGACA +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSRHSCP*LTWWLT
Trigger: TGTCAGCCACCAAGTGAGCCAAGGACAACTGTGCCT...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTTTAGTCGCACTTCCTTaGGAAGCAGTGGCCTGGACA +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSLVALP*EAVAWT
Trigger: TGTCCAGGCCACTGCTTCCCAAGGAAGTGCGACTAA...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp GCAGCAGAAAACAAATACATTAAGCATGAAGCCGAAAGGTTCAGTTTCTTTACCTCCACTTCTGTTGCATaGCCAAAGCATTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: AAENKYIKHEAERFSFFTSTSVA*PKHWPL
Trigger: GAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGA...GGTAAAGAAACTGAACCTTTCGGCTTCATGCTTAATGTATTTGTTTTCTGCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398671.2
CDS-3UTR CCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTGGAGTTATTGTTTTATaGGATCACCTGCTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFGVIVL*DHLLQD
Trigger: GTCTTGCAGCAGGTGATCCCATAAAACAATAACTCC...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGACCACTACATAGAGAATaGATGCAACACAGAATAATC +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGPLHRE*MQHRII
Trigger: GATTATTCTGTGTTGCATCCATTCTCTATGTAGTGG...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCAACTGAATGCGGCACATaGATTTCAGAATGGAACTTA +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSTECGT*ISEWNL
Trigger: TAAGTTCCATTCTGAAATCCATGTGCCGCATTCAGT...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAAGTGAACAACCTAAACTaGTGGGTTTGTGCACATTCT +
Preference number: 4 (lower is better)
Translates to: EENGFSAWALIEGGMAMKVNNLN*WVCAHS
Trigger: AGAATGTGCACAAACCCATCAGTTTAGGTTGTTCAC...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATTCTTCCTCCACCAGTTaGCAGTTTACAAGTGTCACC +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHSSSTS*QFTSVT
Trigger: GGTGACACTTGTAAACTGTCAACTGGTGGAGGAAGA...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTCTTGTTTTTGATGCCTaGGGAAATCTTGGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFLVFDA*GNLGSS
Trigger: ACTAGAACCAAGATTTCCTCAGGCATCAAAAACAAG...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAAGCTTCCATGGCAATATaGACAATTTGGGCATCATGT +
Preference number: 4 (lower is better)
Translates to: EENGFSAWALIEGGMAMKASMAI*TIWASC
Trigger: ACATGATGCCCAAATTGTTCATATTGCCATGGAAGC...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTGGACCACTGTTCAGGTaGAATACGGAGTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCGPLFR*NTESCF
Trigger: GAAGCAGGACTCCGTATTTCACCTGAACAGTGGTCC...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCATGCATGTGTGATTTATaGGCCAAATCACCATACAAA +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSCMCDL*AKSPYK
Trigger: TTTGTATGGTGATTTGGCTCATAAATCACACATGCA...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATAATCGCACCCCATTTTaGGATGATGGGTCCATCACT +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHNRTPF*DDGSIT
Trigger: AGTGATGGACCCATCATCTCAAAATGGGGTGCGATT...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTATAAGGGACATAATCTaGTACACTGATGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFIRDII*YTDGLS
Trigger: ACTAAGCCCATCAGTGTATCAGATTATGTCCCTTAT...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp TCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAGTAATGAGTCTGGAATGCTTTCTATaGCCAGATAAATCAGTAACA +
Preference number: 4 (lower is better)
Translates to: STSVAWPKHWPLSEEVMSLECFL*PDKSVT
Trigger: TGTTACTGATTTATCTGGTCATAGAAAGCATTCCAG...ACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
CDS-3UTR TCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAATTGCTCTTGGCCTGCTaGAGTTCAAGGCTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKLLLAC*SSRLKR
Trigger: CCTTTTGAGCCTTGAACTTCAGCAGGCCAAGAGCAA...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCATGACAGACAGAAGGTaGCCACTACATAGAGAATGG +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCMTDRR*PLHREW
Trigger: CCATTCTCTATGTAGTGGTCACCTTCTGTCTGTCAT...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCAGGAGTTACAGTAAGTaGTCCCATCAAGCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCRSYSK*SHQASS
Trigger: TGAAGAGGCTTGATGGGATCACTTACTGTAACTCCT...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCATTCTGTCCATTGAGCTaGCTGCACAGGCATTGTGGA +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPFCPLS*LHRHCG
Trigger: TCCACAATGCCTGTGCAGGCAGCTCAATGGACAGAA...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGACTCAACGCATTTCTTTaGAACCTCATAGTGTTTATT +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGLNAFL*NLIVFI
Trigger: AATAAACACTATGAGGTTGCAAAGAAATGCGTTGAG...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCTTCAAGGCCTCTTCTTaGATAGCTGGCCCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCFKASS*IAGPKN
Trigger: GTTTTTAGGGCCAGCTATGCAAGAAGAGGCCTTGAA...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAATTGCATTTTCCAGCTaGTCCCAAGTTGGTGAAACA +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRIAFSS*SQVGET
Trigger: TGTTTCACCAACTTGGGAGCAGCTGGAAAATGCAAT...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAATTTAACAGCTACCATTaGATTTTCCAGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: EENGFSAWALIEGGMAMKFNSYH*IFQLLP
Trigger: TGGGAGCAGCTGGAAAATGCAATGGTAGCTGTTAAA...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAAAGAGAAGCATGTTTCTaGTCTTTTCACTGCACACAC +
Preference number: 4 (lower is better)
Translates to: EENGFSAWALIEGGMAMKREACF*SFHCTH
Trigger: GTGTGTGCAGTGAAAAGAGCAGAAACATGCTTCTCT...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATGATGTGGCCTCGTTaGCATATGAACTCCACCTTG +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHMMWPR*HMNSTL
Trigger: CAAGGTGGAGTTCATATGGCAACGAGGCCACATCAT...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAGAAGAAGTAATGAGTTaGTCTTGGCCTGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLREEVMS*SWPAEV
Trigger: AACTTCAGCAGGCCAAGAGCAACTCATTACTTCTTC...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACACAATAGGTAACATATaGAGTTTGGTTACCCACATT +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHTIGNI*SLVTHI
Trigger: AATGTGGGTAACCAAACTGCATATGTTACCTATTGT...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGAAAACCAATGCATAGTTaGAATGCAACTTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGKPMHS*NATFPF
Trigger: AAAGGGAAAAGTTGCATTGCAACTATGCATTGGTTT...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAATTTGGCAGTACTAAGTaGAGCCAGTGTCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKFGSTK*SQCLCS
Trigger: GGAACACAGACACTGGCTGCACTTAGTACTGCCAAA...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTGCAGACAGCAGTTGCTaGAAGCTAACCACGATACTC +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSADSSC*KLTTIL
Trigger: GAGTATCGTGGTTAGCTTGCAGCAACTGCTGTCTGC...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATTGGGCTCCAACTAACTaGAGAAGTGCGAAGTTGACA +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHWAPTN*RSAKLT
Trigger: TGTCAACTTCGCACTTCTCCAGTTAGTTGGAGCCCA...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTCAGTTTCCTTTGCATTaGACGGCTCAGTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSQFPLH*TAQCTL
Trigger: CAGAGTGCACTGAGCCGTCCAATGCAAAGGAAACTG...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTAACGAGCTGCTCGCATaGCTCTTACACGACCTTCTT +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSNELLA*LLHDLL
Trigger: AAGAAGGTCGTGTAAGAGCCATGCGAGCAGCTCGTT...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAACAATTTGTTCCTCGTaGACAACCCCCTTGCTGTCG +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKTICSS*TTPLLS
Trigger: CGACAGCAAGGGGGTTGTCCACGAGGAACAAATTGT...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGAAATTCCGTTTGTACTTaGAACAATTTTCCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LICGLDALYSLASKGIQGNSVCT*NNFPCC
Trigger: ACAACAGGGAAAATTGTTCCAAGTACAAACGGAATT...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACAATTCCGTTTGTACTTaGAACAATTTTCCCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHNSVCT*NNFPCC
Trigger: ACAACAGGGAAAATTGTTCCAAGTACAAACGGAATT...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCATGGTACCGTTGGAGGTaGTGGATAGTATCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPWYRWR*WIVSCL
Trigger: CAGACAGGATACTATCCACCACCTCCAACGGTACCA...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAATGGTACCGTTGGAGGTaGTGGATAGTATCCTGTCTG +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKWYRWR*WIVSCL
Trigger: CAGACAGGATACTATCCACCACCTCCAACGGTACCA...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAAATAATGTCATCTCGTTaGTACATAGGTGGGCGCCAG +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKIMSSR*YIGGRQ
Trigger: CTGGCGCCCACCTATGTACCAACGAGATGACATTAT...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATCTGTGCCCACTGATCTaGCTTTCTTCTTATCTGCTC +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHLCPLI*LSSYLL
Trigger: GAGCAGATAAGAAGAAAGCCAGATCAGTGGGCACAG...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTCCTGGACAGGATCTGTaGTATGGTAACCTGTACGGG +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCPGQDL*YGNLYG
Trigger: CCCGTACAGGTTACCATACCACAGATCCTGTCCAGG...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp ACAGCATTTGAATTAGCAATGACATCTTTGGGCTCTGAATCAATGGCATTTATACCTGGACAGGATCTGTaGTATGGTAACCTGTACGGG +
Preference number: 4 (lower is better)
Translates to: TAFELAMTSLGSESMAFIPGQDL*YGNLYG
Trigger: CCCGTACAGGTTACCATACCACAGATCCTGTCCAGG...TATAAATGCCATTGATTCAGAGCCCAAAGATGTCATTGCTAATTCAAATGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAAAGTGTGCTGATGATGTaGCCTCGTTGCCATATGAAC +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKSVLMM*PRCHMN
Trigger: GTTCATATGGCAACGAGGCCACATCATCAGCACACT...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTCAAGATCTCTTCAATTaGTTCACTTTGTCCATCAGG +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFQDLFN*FTLSIR
Trigger: CCTGATGGACAAAGTGAACCAATTGAAGAGATCTTG...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAACTGTTTCTTCTGCTTTaGTGGCTCCTTTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKLFLLL*WLLLVL
Trigger: CAGCACCAAAAGGAGCCACCAAAGCAGAAGAAACAG...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAGACACTGGGAGTGGCTaGCTAAAGCAAGAAGTTACC +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPDTGSG*LKQEVT
Trigger: GGTAACTTCTTGCTTTAGCCAGCCACTCCCAGTGTC...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGACACTGGGAGTGGCTaGCTAAAGCAAGAAGTTACC +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKDTGSG*LKQEVT
Trigger: GGTAACTTCTTGCTTTAGCCAGCCACTCCCAGTGTC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCAGAGTCCACAGGAAATaGATGCCCCCAGTAATATCT +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCRVHRK*MPPVIS
Trigger: AGATATTACTGGGGGCATCCATTTCCTGTGGACTCT...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTCAACCCTCCCGCCCCTaGAAATGTGCACAAAACTTT +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSQPSRP*KCAQNF
Trigger: AAAGTTTTGTGCACATTTCCAGGGGCGGGAGGGTTG...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAACAACCCTCCCGCCCCTaGAAATGTGCACAAAACTTT +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKQPSRP*KCAQNF
Trigger: AAAGTTTTGTGCACATTTCCAGGGGCGGGAGGGTTG...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATCACGATACTCCCAAGTaGCTGTACAGTGGATATGTG +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHHDTPK*LYSGYV
Trigger: CACATATCCACTGTACAGCCACTTGGGAGTATCGTG...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAACACGATACTCCCAAGTaGCTGTACAGTGGATATGTG +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKHDTPK*LYSGYV
Trigger: CACATATCCACTGTACAGCCACTTGGGAGTATCGTG...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR CAA 72 bp TATCCAGAAAATGGGATACTCCTTGAGCATGTTCTTTaGTGTTCTGCTTGCAGAAGGGGTCCTTATGTAGAA +
Preference number: 4 (lower is better)
Translates to: YPENGILLEHVL*CSACRRGPYVE
Trigger: TTCTACATAAGGACCCCTTCTGCAAGCAGAACACAAAAGAACATGCTCAAGGAGTATCCCATTTTCTGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR CAA 72 bp CCAGCTGAGGTAGCTGCTACATTACTTACAGGAGTCTaGGGTGGAGAACCAATTTTATTTTCAGTTACAGAA +
Preference number: 4 (lower is better)
Translates to: PAEVAATLLTGV*GGEPILFSVTE
Trigger: TTCTGTAACTGAAAATAAAATTGGTTCTCCACCCAAGACTCCTGTAAGTAATGTAGCAGCTACCTCAGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp TCAGGTATGGACAAGCTGAATGTATTTCCTGGAGTCTCCCAAATTATCTTGATGGGAGAAGTGCGAAGTTaGCAGGAAGTACATCAATAT +
Preference number: 4 (lower is better)
Translates to: SGMDKLNVFPGVSQIILMGEVRS*QEVHQY
Trigger: ATATTGATGTACTTCCTGTCAACTTCGCACTTCTCC...CATCAAGATAATTTGGGAGACTCCAGGAAATACATTCAGCTTGTCCATACCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGGGAGAAGTGCGAAGTTaGCAGGAAGTACATCAATAT +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQGEVRS*QEVHQY
Trigger: ATATTGATGTACTTCCTGTCAACTTCGCACTTCTCC...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTTTGGCAGACAACTGCTaGGGGTTCTGGTGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCLADNC*GFWCCN
Trigger: ATTACAGCACCAGAACCCTCAGCAGTTGTCTGCCAA...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTTACCAGAACTTTCCTTaGGAGGGCAGAACCATCTTC +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSYQNFP*EGRTIF
Trigger: GAAGATGGTTCTGCCCTCTCAAGGAAAGTTCTGGTA...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGGCTTCCATGGCAATATaGACAATTTGGGCATCATGT +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQASMAI*TIWASC
Trigger: ACATGATGCCCAAATTGTTCATATTGCCATGGAAGC...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAACAGGATGAGATTCTGTaGTGTACTGAGGAACTAATT +
Preference number: 4 (lower is better)
Translates to: EENGFSAWALIEGGMAMKQDEIL*CTEELI
Trigger: AATTAGTTCCTCAGTACATCACAGAATCTCATCCTG...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATTGTCTGATAGACAGATaGGTGCATCACATCCATTGG +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHCLIDR*VHHIHW
Trigger: CCAATGGATGTGATGCACTCATCTGTCTATCAGACA...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGCATTGGCCTCTCTCTaGAGAAGTAATGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKALASL*RSNELL
Trigger: GAGCAACTCATTACTTCTTCAGAGAGAGGCCAATGC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTAGGTTTAAGGTAAGGTaGCGGCCTTCATCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCRFKVR*RPSSRE
Trigger: TTCCCTGGATGAAGGCCGTCACCTTACCTTAAACCT...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTTTTTCTCAAGAAAGCTaGAAGCACCTGATTCTTTTG +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFFSQES*KHLILL
Trigger: CAAAAGAATCAGGTGCTTTCAGCTTTCTTGAGAAAA...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAAGTTATCAATACTGGTaGCAGTCTGCTCCAAAAATG +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRSYQYW*QSAPKM
Trigger: CATTTTTGGAGCAGACTGTCACCAGTATTGATAACT...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTTTTGATCTGTGGTCTTaGCGCCTTGTATTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSFDLWS*RLVFPC
Trigger: GCAAGGGAATACAAGGCGTCAAGACCACAGATCAAA...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAAAATGTGGGGTGTTTTaGTCTGTGGTCTTGACGCCT +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKKCGVF*SVVLTP
Trigger: AGGCGTCAAGACCACAGATCAAAACACCCCACATTT...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCACCTTGGGTTATAAAGTaGGGCCTAATTCTCGACAGG +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPPWVIK*GLILDR
Trigger: CCTGTCGAGAATTAGGCCTCACTTTATAACCCAAGG...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCTGCCTGCTTTTTACATaGTGGGTGTACACCATCTTT +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCCLLFT*WVYTIF
Trigger: AAAGATGGTGTACACCCATCATGTAAAAAGCAGGCA...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp CACCAAAATGCACTCAGTAATGGTATAACCAAGATGCAGCAGCAGAAAACAAATCATATGAACTCCACCTaGTACACTGATGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: HQNALSNGITKMQQQKTNHMNST*YTDGLS
Trigger: ACTAAGCCCATCAGTGTATCAGGTGGAGTTCATATG...ATTTGTTTTCTGCTGCTGCATCTTGGTTATACCATTACTGAGTGCATTTTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398671.2
CDS-3UTR GCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCAATTCCTCCTTCAGCTaGATTAGGGAAGAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCNSSFS*IREESS
Trigger: TGAAGACTCTTCCCTAATGCAGCTGAAGGAGGAATT...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATGGGCATCATGTTCTCTaGGTAATGCTTCATAACTCC +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHGHHVL*VMLHNS
Trigger: GGAGTTATGAAGCATTACGCAGAGAACATGATGCCC...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp AGAGTAGAGCTAGAGGATAAAATCAGGATGAGATTCTGTGATGTACTGAGGAACGGGTCACCTGTTCGTTaGAAAACAATTGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: RVELEDKIRMRFCDVLRNGSPVR*KTIVNS
Trigger: GGAATTGACAATTGTTTTGCAACGAACAGGTGACCC...GTTCCTCAGTACATCACAGAATCTCATCCTGATTTTATCCTCTAGCTCTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp AGAGTAGAGCTAGAGGATAAAATCAGGATGAGATTCTGTGATGTACTGAGGAACATTGCATTTTCCAGCTaGTCCCAAGTTGGTGAAACA +
Preference number: 4 (lower is better)
Translates to: RVELEDKIRMRFCDVLRNIAFSS*SQVGET
Trigger: TGTTTCACCAACTTGGGAGCAGCTGGAAAATGCAAT...GTTCCTCAGTACATCACAGAATCTCATCCTGATTTTATCCTCTAGCTCTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCTTTAACAGCTACCATTaGATTTTCCAGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCFNSYH*IFQLLP
Trigger: TGGGAGCAGCTGGAAAATGCAATGGTAGCTGTTAAA...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAAAGGCGTATGCCACTATaGTCAGCCAATTTTGTTTAT +
Preference number: 4 (lower is better)
Translates to: EENGFSAWALIEGGMAMKRRMPL*SANFVY
Trigger: ATAAACAAAATTGGCTGAGCATAGTGGCATACGCCT...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGAATTCCACTTCTGTTaGATGGCCAAAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKEFHFC*MAKALA
Trigger: GGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAGATGGGGAGGCAACTTaGATTGCTAATAGACACTGG +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPDGEAT*IANRHW
Trigger: CCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATC...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGATGGGGAGGCAACTTaGATTGCTAATAGACACTGG +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKDGEAT*IANRHW
Trigger: CCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGAAATGGCTCAGTTACTaGACCGGATTGCTACAAACT +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQKWLSY*TGLLQT
Trigger: AGTTTGTAGCAATCCGGTGCAGTAACTGAGCCATTT...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCATCACCAGGAAGGAATaGCCAGCTCTTCTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCITRKE*PALLFK
Trigger: TTTGAAAAGAAGAGCTGGGCATTCCTTCCTGGTGAT...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGACCACAGTAACTGAATaGGGCACATGGATTTCAGAA +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQTTVTE*GTWISE
Trigger: TTCTGAAATCCATGTGCCGCATTCAGTTACTGTGGT...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGACTTCCAGGAAACCAATaGATAGTTGCAATGCAACTT +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRLPGNQ*IVAMQL
Trigger: AAGTTGCATTGCAACTATGCATTGGTTTCCTGGAAG...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCCTTTTGTGTTCTGCTTaGAGAAGGGGTCCTTATGTA +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCLLCSA*RRGPYV
Trigger: TACATAAGGACCCCTTCTGCAAGCAGAACACAAAAG...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGCTTAGAGATGGTGCCTaGTTTTTACATGATGGGTGT +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQLRDGA*FLHDGC
Trigger: ACACCCATCATGTAAAAAGCAGGCACCATCTCTAAG...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCATTCATTATAGCAGATTaGACAGGACAGAAATTCTGT +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSFIIAD*TGQKFC
Trigger: ACAGAATTTCTGTCCTGTCCAATCTGCTATAATGAA...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAATGTCTGTGGGTACTGTaGGACTTCAAAGGGTATCTG +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKCLWVL*DFKGYL
Trigger: CAGATACCCTTTGAAGTCCCACAGTACCCACAGACA...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCATGTCTGTGGGTACTGTaGGACTTCAAAGGGTATCTG +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPCLWVL*DFKGYL
Trigger: CAGATACCCTTTGAAGTCCCACAGTACCCACAGACA...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTTACCGTTGGAGGTGGTaGATAGTATCCTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCYRWRW*IVSCLW
Trigger: CCACAGACAGGATACTATCCACCACCTCCAACGGTA...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAATCTGCTCCTCGCAACTaGTCTTCAAATGACCACAAG +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKSAPRN*SSNDHK
Trigger: CTTGTGGTCATTTGAAGACCAGTTGCGAGGAGCAGA...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTTTATACAGGAGCCTATaGTGCCACAAGACCAGGGAG +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCLYRSL*CHKTRE
Trigger: CTCCCTGGTCTTGTGGCACCATAGGCTCCTGTATAA...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGCATGGCCAAAGCATTaGCCTCTCTCTGAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKAWPKH*PLSEEV
Trigger: TACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATTGCTAATAGACACTaGGAGTGGCTGGCTAAAGCA +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHIANRH*EWLAKA
Trigger: TGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAAT...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAAAGAGTCCACAGGAAATaGATGCCCCCAGTAATATCT +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKRVHRK*MPPVIS
Trigger: AGATATTACTGGGGGCATCCATTTCCTGTGGACTCT...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGGTGGCAGAGAACCAATaGCTTTACTTCACATTAAGC +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQVAENQ*LYFTLS
Trigger: GCTTAATGTGAAGTAAAGCCATTGGTTCTCTGCCAC...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAATTGAAAATAAGACGTaGCAGCAAAGGCAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRIENKT*QQRQGN
Trigger: ATTCCCTTGCCTTTGCTGCCACGTCTTATTTTCAAT...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATGACTCCACTCAAATGTaGGGTGTTTTGATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHDSTQM*GVLICG
Trigger: ACCACAGATCAAAACACCCCACATTTGAGTGGAGTC...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAAGACTCCACTCAAATGTaGGGTGTTTTGATCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKDSTQM*GVLICG
Trigger: ACCACAGATCAAAACACCCCACATTTGAGTGGAGTC...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGACAAGTGGCTGTACAGTaGATATGTGCAGTACAAATA +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRQVAVQ*ICAVQI
Trigger: TATTTGTACTGCACATATCCACTGTACAGCCACTTG...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCAGGAGTTAATGAACTTTaGAAACTACTGATCCAAACA +
Preference number: 4 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSGVNEL*KLLIQT
Trigger: TGTTTGGATCAGTAGTTTCCAAAGTTCATTAACTCC...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373670.5
CDS-3UTR TCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGCTTGTTTTTGATGCCTaGGGAAATCTTGGTTCTAGT +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQLVFDA*GNLGSS
Trigger: ACTAGAACCAAGATTTCCTCAGGCATCAAAAACAAG...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp AGAGTAGAGCTAGAGGATAAAATCAGGATGAGATTCTGTGATGTACTGAGGAACACCAATACTTGTTTTTaGTGCCTGAGGAAATCTTGG +
Preference number: 4 (lower is better)
Translates to: RVELEDKIRMRFCDVLRNTNTCF*CLRKSW
Trigger: CCAAGATTTCCTCAGGCATCAAAAACAAGTATTGGT...GTTCCTCAGTACATCACAGAATCTCATCCTGATTTTATCCTCTAGCTCTACTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR TCA 90 bp AATACATTAAGCATGAAGCCGAAAGGTTCAGTTTCTTTACCTCTCCATTTCTTAAATCGCACCCCATTTTaGGATGATGGGTCCATCACT +
Preference number: 4 (lower is better)
Translates to: NTLSMKPKGSVSLPLHFLNRTPF*DDGSIT
Trigger: AGTGATGGACCCATCATCTCAAAATGGGGTGCGATT...TAAGAAATGGAGAGGTAAAGAAACTGAACCTTTCGGCTTCATGCTTAATGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398671.2
CDS-3UTR TCA 90 bp AATACATTAAGCATGAAGCCGAAAGGTTCAGTTTCTTTACCTCTCCATTTCTTAGCATTGGCCTCTCTCTaGAGAAGTAATGAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: NTLSMKPKGSVSLPLHFLALASL*RSNELL
Trigger: GAGCAACTCATTACTTCTTCAGAGAGAGGCCAATGC...TAAGAAATGGAGAGGTAAAGAAACTGAACCTTTCGGCTTCATGCTTAATGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398671.2
CDS-3UTR TCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGACACAAATCTGATGCATaGCTTGTTGAACACATTGTA +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRHKSDA*LVEHIV
Trigger: TACAATGTGTTCAACAAGTCATGCATCAGATTTGTG...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCATACAACCACAGTAACTaGATGCGGCACATGGATTTC +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPYNHSN*MRHMDF
Trigger: GAAATCCATGTGCCGCATTCAGTTACTGTGGTTGTA...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATAATCGGTTGTACAATTaGCAAACAGGCCTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHNRLYN*QTGLFS
Trigger: GGAAAAGAGGCCTGTTTGTCAATTGTACAACCGATT...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAAAATTCCTCCTTCAGCTaGATTAGGGAAGAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKNSSFS*IREESS
Trigger: TGAAGACTCTTCCCTAATGCAGCTGAAGGAGGAATT...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TCAGGTATGGACAAGCTGAATGTATTTCCTGGAGTCTCCCAAATTATCTTGATGTTCTGCTCTTTTCACTaGACACACACTTATCTTCTC +
Preference number: 4 (lower is better)
Translates to: SGMDKLNVFPGVSQIILMFCSFH*THTYLL
Trigger: GAGAAGATAAGTGTGTGTGCAGTGAAAAGAGCAGAA...CATCAAGATAATTTGGGAGACTCCAGGAAATACATTCAGCTTGTCCATACCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp ACAGCATTTGAATTAGCAATGACATCTTTGGGCTCTGAATCAATGGCATTTATATTCAGTTACAGAATCTaGAGAGGGCCCAGCAGCATT +
Preference number: 4 (lower is better)
Translates to: TAFELAMTSLGSESMAFIFSYRI*RGPSSI
Trigger: AATGCTGCTGGGCCCTCTGCAGATTCTGTAACTGAA...TATAAATGCCATTGATTCAGAGCCCAAAGATGTCATTGCTAATTCAAATGCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR GCA 90 bp CACCAAAATGCACTCAGTAATGGTATAACCAAGATGCAGCAGCAGAAAACAAATGAAGAAGTAATGAGTTaGTCTTGGCCTGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: HQNALSNGITKMQQQKTNEEVMS*SWPAEV
Trigger: AACTTCAGCAGGCCAAGAGCAACTCATTACTTCTTC...ATTTGTTTTCTGCTGCTGCATCTTGGTTATACCATTACTGAGTGCATTTTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398671.2
CDS-3UTR GCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATCATCTTGTTAGTCAGTaGAAACGCTACATACAGGGT +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHHLVSQ*KRYIQG
Trigger: ACCCTGTATGTAGCGTTTGCACTGACTAACAAGATG...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGAAGTCAAGGCTACTGTaGTGTTGTTATGCTACAAAC +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQKSRLL*CCYATN
Trigger: GTTTGTAGCATAACAACAGCACAGTAGCCTTGACTT...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAAAAAGGCAAGGGAATCTaGTTTGTTCAGGTACCAACT +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKKGKGI*FVQVPT
Trigger: AGTTGGTACCTGAACAAAGCAGATTCCCTTGCCTTT...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTACTCTGGAACGTTATTaGACCTCACAAAGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSTLERY*TSQSEE
Trigger: TTCCTCGCTTTGTGAGGTCCAATAACGTTCCAGAGT...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTCTGTACGGGAAGATCTaGAAATCGCACCCCATTTTG +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCLYGKI*KSHPIL
Trigger: CAAAATGGGGTGCGATTTCCAGATCTTCCCGTACAG...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp ACAGCATTTGAATTAGCAATGACATCTTTGGGCTCTGAATCAATGGCATTTATAGCATGGCCAAAGCATTaGCCTCTCTCTGAAGAAGTA +
Preference number: 4 (lower is better)
Translates to: TAFELAMTSLGSESMAFIAWPKH*PLSEEV
Trigger: TACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGC...TATAAATGCCATTGATTCAGAGCCCAAAGATGTCATTGCTAATTCAAATGCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTGTGTCTGTGTTCCACTaGTTTGGGAATATTTTAAAA +
Preference number: 4 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFVSVFH*FGNILK
Trigger: TTTTAAAATATTCCCAAACCAGTGGAACACAGACAC...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR CAA 72 bp AGGGAGAATAATGGGAAAGATGATCTTCTTCAAATTTaGTACCACTCACACTCTCTGAGAAATCCGCACGAA +
Preference number: 4 (lower is better)
Translates to: RENNGKDDLLQI*YHSHSLRNPHE
Trigger: TTCGTGCGGATTTCTCAGAGAGTGTGAGTGGTACAAAATTTGAAGAAGATCATCTTTCCCATTATTCTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCACATCAATATCTGTGTTaGTGGCAGTCTGGTCAAAAG +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPHQYLC*WQSGQK
Trigger: CTTTTGACCAGACTGCCATCAACACAGATATTGATG...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAGATAGACTGCATGTGTaGTTTATGAGCCAAATCACC +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPDRLHV*FMSQIT
Trigger: GGTGATTTGGCTCATAAATCACACATGCAGTCTATC...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGATAGACTGCATGTGTaGTTTATGAGCCAAATCACC +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKDRLHV*FMSQIT
Trigger: GGTGATTTGGCTCATAAATCACACATGCAGTCTATC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGCTGGAATGCTTTCTATaGCCAGATAAATCAGTAACA +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQLECFL*PDKSVT
Trigger: TGTTACTGATTTATCTGGTCATAGAAAGCATTCCAG...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCCACAAATTTGAAAGATaGACCTCCTTTCAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCHKFER*TSFQLL
Trigger: TAACAGCTGAAAGGAGGTTCATCTTTCAAATTTGTG...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAAAAGCTGAAAGCACCTaGTTCTTTTGCCAAGTCATC +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKKAEST*FFCQVI
Trigger: GATGACTTGGCAAAAGAATCAGGTGCTTTCAGCTTT...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAGGTAAAAAGGCCAAATaGCGGGAAATGCCTCAATTT +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPGKKAK*REMPQF
Trigger: AAATTGAGGCATTTCCCGTCATTTGGCCTTTTTACC...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTGGTAAAAAGGCCAAATaGCGGGAAATGCCTCAATTT +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSGKKAK*REMPQF
Trigger: AAATTGAGGCATTTCCCGTCATTTGGCCTTTTTACC...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAAAGTCTGCTCCAAAAATaGCTCAAAGAAGATAGGGAA +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKSLLQK*LKEDRE
Trigger: TTCCCTATCTTCTTTGAGTCATTTTTGGAGCAGACT...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTAATCGGTTGTACAATTaGCAAACAGGCCTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSNRLYN*QTGLFS
Trigger: GGAAAAGAGGCCTGTTTGTCAATTGTACAACCGATT...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAATGCCTGCTTTTTACATaGTGGGTGTACACCATCTTT +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKCLLFT*WVYTIF
Trigger: AAAGATGGTGTACACCCATCATGTAAAAAGCAGGCA...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAACTTGGTTCTAGTCTCTaGACAACAAAAAGTACCAGA +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKLGSSL*TTKSTR
Trigger: TCTGGTACTTTTTGTTGTGCAGAGACTAGAACCAAG...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTAATTCCTCCTTCAGCTaGATTAGGGAAGAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSNSSFS*IREESS
Trigger: TGAAGACTCTTCCCTAATGCAGCTGAAGGAGGAATT...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTGGGTCACCTGTTCGTTaGAAAACAATTGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSGSPVR*KTIVNS
Trigger: GGAATTGACAATTGTTTTGCAACGAACAGGTGACCC...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAGGGTCACCTGTTCGTTaGAAAACAATTGTCAATTCC +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPGSPVR*KTIVNS
Trigger: GGAATTGACAATTGTTTTGCAACGAACAGGTGACCC...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAGAAGAAGTAATGAGTTaGTCTTGGCCTGCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPEEVMS*SWPAEV
Trigger: AACTTCAGCAGGCCAAGAGCAACTCATTACTTCTTC...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAATCACCAGGAAGGAATaGCCAGCTCTTCTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPITRKE*PALLFK
Trigger: TTTGAAAAGAAGAGCTGGGCATTCCTTCCTGGTGAT...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATACTGGTGACAGTCTaGTCCAAAAATGACTCAAAG +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHILVTV*SKNDSK
Trigger: CTTTGAGTCATTTTTGGAGCAGACTGTCACCAGTAT...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAAATACTGGTGACAGTCTaGTCCAAAAATGACTCAAAG +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKILVTV*SKNDSK
Trigger: CTTTGAGTCATTTTTGGAGCAGACTGTCACCAGTAT...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTAATGCAGACAGCAGTTaGTGCAAGCTAACCACGATA +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCNADSS*CKLTTI
Trigger: TATCGTGGTTAGCTTGCAGCAACTGCTGTCTGCATT...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCACTTAGAGATGGTGCCTaGTTTTTACATGATGGGTGT +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPLRDGA*FLHDGC
Trigger: ACACCCATCATGTAAAAAGCAGGCACCATCTCTAAG...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGACAATTGTCAATTCCTaGACACTCTTTGCAAATGAC +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQTIVNS*TLFAND
Trigger: GTCATTTGCAAAGAGTGTCCAGGAATTGACAATTGT...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TCAGGTATGGACAAGCTGAATGTATTTCCTGGAGTCTCCCAAATTATCTTGATGAACAAAGTATACAAATaGCAGAGTAGAGCTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SGMDKLNVFPGVSQIILMNKVYK*QSRARG
Trigger: TCCTCTAGCTCTACTCTGCCATTTGTATACTTTGTT...CATCAAGATAATTTGGGAGACTCCAGGAAATACATTCAGCTTGTCCATACCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAATAGTATCCTGTCTGTaGGTACTGTGGGACTTCAAA +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPIVSCL*VLWDFK
Trigger: TTTGAAGTCCCACAGTACCCACAGACAGGATACTAT...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAAATTCCAATCATTTCTaGAAAGTGAACATGTTACCC +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRNSNHF*KVNMLP
Trigger: GGGTAACATGTTCACTTTCCAGAAATGATTGGAATT...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAGCAGCTGGAATGAGATaGAAACTTCTCTCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPAAGMR*KLLSVK
Trigger: TTTCACTGAGAGAAGTTTCCATCTCATTCCAGCTGC...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGGAGTTATTGTTTTATaGGATCACCTGCTGCAAGAC +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKGVIVL*DHLLQD
Trigger: GTCTTGCAGCAGGTGATCCCATAAAACAATAACTCC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTCCCTTTCTTCGAAAGTaGCAGAGAACCAATGGCTTT +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCPFLRK*QRTNGF
Trigger: AAAGCCATTGGTTCTCTGCCACTTTCGAAGAAAGGG...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAGTAACATATGCAGTTTaGTTACCCACATTACACATT +
Preference number: 4 (lower is better)
Translates to: DISRYHSEEGSDELPFLRVTYAV*LPTLHI
Trigger: AATGTGTAATGTGGGTAACCAAACTGCATATGTTAC...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAAACTGAATGCGGCACATaGATTTCAGAATGGAACTTA +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKTECGT*ISEWNL
Trigger: TAAGTTCCATTCTGAAATCCATGTGCCGCATTCAGT...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGAAAAAGTGTTTCCCTTaGATAACCAGTACCCCAAAA +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQKKCFP*ITSTPK
Trigger: TTTTGGGGTACTGGTTATCCAAGGGAAACACTTTTT...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373670.5
3UTR CAA 72 bp TTCAGTACAATACCTCCCACAAATCTGATGCATGACTaGTTGAACACATTGTATACTTTCAGATGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: FSTIPPTNLMHD*LNTLYTFRCQV
Trigger: GACTTGGCATCTGAAAGTATACAATGTGTTCAACAAGTCATGCATCAGATTTGTGGGAGGTATTGTACTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTACCAATACTTGTTTTTaGTGCCTGAGGAAATCTTGG +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSTNTCF*CLRKSW
Trigger: CCAAGATTTCCTCAGGCATCAAAAACAAGTATTGGT...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAACCAATACTTGTTTTTaGTGCCTGAGGAAATCTTGG +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKTNTCF*CLRKSW
Trigger: CCAAGATTTCCTCAGGCATCAAAAACAAGTATTGGT...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTGCTTCCATGGCAATATaGACAATTTGGGCATCATGT +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCASMAI*TIWASC
Trigger: ACATGATGCCCAAATTGTTCATATTGCCATGGAAGC...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAATTATCAGTCACCTTATaGGCATGTTCATTAAGACAG +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKLSVTL*ACSLRQ
Trigger: CTGTCTTAATGAACATGCTCATAAGGTGACTGATAA...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTAGTTATCAATACTGGTaGCAGTCTGCTCCAAAAATG +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSSYQYW*QSAPKM
Trigger: CATTTTTGGAGCAGACTGTCACCAGTATTGATAACT...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAAAATGGGATACTCCTTaGGCATGTTCTTTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPKWDTP*ACSFVF
Trigger: GAACACAAAAGAACATGCTCAAGGAGTATCCCATTT...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAAAATGGGATACTCCTTaGGCATGTTCTTTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKKWDTP*ACSFVF
Trigger: GAACACAAAAGAACATGCTCAAGGAGTATCCCATTT...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCATATTCAAGCAGGTCTTaGAAACAGTGTGTGAACAAC +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPYSSRS*KQCVNN
Trigger: GTTGTTCACACACTGTTTGCAAGACCTGCTTGAATA...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTTATTCAAGCAGGTCTTaGAAACAGTGTGTGAACAAC +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSYSSRS*KQCVNN
Trigger: GTTGTTCACACACTGTTTGCAAGACCTGCTTGAATA...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp AGAGTAGAGCTAGAGGATAAAATCAGGATGAGATTCTGTGATGTACTGAGGAACCTCAACGCATTTCTTTaGAACCTCATAGTGTTTATT +
Preference number: 4 (lower is better)
Translates to: RVELEDKIRMRFCDVLRNLNAFL*NLIVFI
Trigger: AATAAACACTATGAGGTTGCAAAGAAATGCGTTGAG...GTTCCTCAGTACATCACAGAATCTCATCCTGATTTTATCCTCTAGCTCTACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR GCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTTTTAACAGCTACCATTaGATTTTCCAGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCFNSYH*IFQLLP
Trigger: TGGGAGCAGCTGGAAAATGCAATGGTAGCTGTTAAA...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGTTACTGCACCGGATTaGTACAAACTCATAAAAAGC +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKVTAPD*YKLIKS
Trigger: GCTTTTTATGAGTTTGTAGCAATCCGGTGCAGTAAC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAAAGTCAAGGCTACTGTaGTGTTGTTATGCTACAAAC +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKKSRLL*CCYATN
Trigger: GTTTGTAGCATAACAACAGCACAGTAGCCTTGACTT...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTCTTTTGTGTTCTGCTTaGAGAAGGGGTCCTTATGTA +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCLLCSA*RRGPYV
Trigger: TACATAAGGACCCCTTCTGCAAGCAGAACACAAAAG...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGCTAGAAGGGAATAACTaGTCTTGGAGTAAAAATAAG +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQLEGNN*SWSKNK
Trigger: CTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAG...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp AGAGTAGAGCTAGAGGATAAAATCAGGATGAGATTCTGTGATGTACTGAGGAACTTCATTATAGCAGATTaGACAGGACAGAAATTCTGT +
Preference number: 4 (lower is better)
Translates to: RVELEDKIRMRFCDVLRNFIIAD*TGQKFC
Trigger: ACAGAATTTCTGTCCTGTCCAATCTGCTATAATGAA...GTTCCTCAGTACATCACAGAATCTCATCCTGATTTTATCCTCTAGCTCTACTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CCA 90 bp ACAGCATTTGAATTAGCAATGACATCTTTGGGCTCTGAATCAATGGCATTTATACTACGTGAGATTAGCTaGGAAACACTGTTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: TAFELAMTSLGSESMAFILREIS*ETLFSA
Trigger: TGCAGAAAACAGTGTTTCCCAGCTAATCTCACGTAG...TATAAATGCCATTGATTCAGAGCCCAAAGATGTCATTGCTAATTCAAATGCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAATACTTACAGGAGTCTTaGGTGGAGAACCAATTTTAT +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKYLQES*VENQFY
Trigger: ATAAAATTGGTTCTCCACCCAAGACTCCTGTAAGTA...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATCCACTACATAGAGAATaGATGCAACACAGAATAATC +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHPLHRE*MQHRII
Trigger: GATTATTCTGTGTTGCATCCATTCTCTATGTAGTGG...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGGTAACATATGCAGTTTaGTTACCCACATTACACATT +
Preference number: 4 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQVTYAV*LPTLHI
Trigger: AATGTGTAATGTGGGTAACCAAACTGCATATGTTAC...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
3UTR CAA 72 bp ACTGCACCGGATTGCTACAAACTCATAAAAAGCTGCTaGAAGCTTAAGTTAAATGTTGTCCAAATTCCAATC +
Preference number: 4 (lower is better)
Translates to: TAPDCYKLIKSC*KLKLNVVQIPI
Trigger: GATTGGAATTTGGACAACATTTAACTTAAGCTTCAAGCAGCTTTTTATGAGTTTGTAGCAATCCGGTGCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
3UTR CAA 72 bp AGTACAATACCTCCCACAAATCTGATGCATGACTTGTaGAACACATTGTATACTTTCAGATGCCAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: STIPPTNLMHDL*NTLYTFRCQVK
Trigger: TTTGACTTGGCATCTGAAAGTATACAATGTGTTCAACAAGTCATGCATCAGATTTGTGGGAGGTATTGTACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTTGCATGTGTGATTTATaGGCCAAATCACCATACAAA +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSCMCDL*AKSPYK
Trigger: TTTGTATGGTGATTTGGCTCATAAATCACACATGCA...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR TCA 90 bp ACAGCATTTGAATTAGCAATGACATCTTTGGGCTCTGAATCAATGGCATTTATAATAAGGGACATAATCTaGTACACTGATGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: TAFELAMTSLGSESMAFIIRDII*YTDGLS
Trigger: ACTAAGCCCATCAGTGTATCAGATTATGTCCCTTAT...TATAAATGCCATTGATTCAGAGCCCAAAGATGTCATTGCTAATTCAAATGCTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR TCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCATTGAATCAACAGCATTaGCATAAGGGACATAATCTG +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPLNQQH*HKGHNL
Trigger: CAGATTATGTCCCTTATGTCAATGCTGTTGATTCAA...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCACTGGAATGCTTTCTATaGCCAGATAAATCAGTAACA +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPLECFL*PDKSVT
Trigger: TGTTACTGATTTATCTGGTCATAGAAAGCATTCCAG...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAACTCAACGCATTTCTTTaGAACCTCATAGTGTTTATT +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKLNAFL*NLIVFI
Trigger: AATAAACACTATGAGGTTGCAAAGAAATGCGTTGAG...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTCTTGGTTCTAGTCTCTaGACAACAAAAAGTACCAGA +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCLGSSL*TTKSTR
Trigger: TCTGGTACTTTTTGTTGTGCAGAGACTAGAACCAAG...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAATTTTATGGGATCACCTaGTGCAAGACAAGCATTATT +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKFYGIT*CKTSII
Trigger: AATAATGCTTGTCTTGCAGCAGGTGATCCCATAAAA...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAAGAAATTCCTACAAATTaGCGTGCATCCTGTAATTTT +
Preference number: 4 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKEIPTN*RASCNF
Trigger: AAAATTACAGGATGCACGGCAATTTGTAGGAATTTC...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTCTTCCAGGAAACCAATaGATAGTTGCAATGCAACTT +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCLPGNQ*IVAMQL
Trigger: AAGTTGCATTGCAACTATGCATTGGTTTCCTGGAAG...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATCTAGAAGGGAATAACTaGTCTTGGAGTAAAAATAAG +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHLEGNN*SWSKNK
Trigger: CTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAG...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATTACAGTATAATTGTTTaGCCAGCTAAGAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHYSIIV*PAKRMH
Trigger: ATGCATTCTCTTAGCTGGGCAAACAATTATACTGTA...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCATACTTACAGGAGTCTTaGGTGGAGAACCAATTTTAT +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPYLQES*VENQFY
Trigger: ATAAAATTGGTTCTCCACCCAAGACTCCTGTAAGTA...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAGGGTATCTGAGTCCTTaGATCTTGAAAATACTGAAT +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPGYLSP*ILKILN
Trigger: ATTCAGTATTTTCAAGATCCAAGGACTCAGATACCC...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTGGGTATCTGAGTCCTTaGATCTTGAAAATACTGAAT +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSGYLSP*ILKILN
Trigger: ATTCAGTATTTTCAAGATCCAAGGACTCAGATACCC...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTATTGAAAATAAGACGTaGCAGCAAAGGCAAGGGAAT +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCIENKT*QQRQGN
Trigger: ATTCCCTTGCCTTTGCTGCCACGTCTTATTTTCAAT...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTAAAAATCAGTGCCACTaGCCTAATGAACTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCKNQCH*PNELPF
Trigger: AAAAGGGAGTTCATTAGGCCAGTGGCACTGATTTTT...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTCAAGTGGCTGTACAGTaGATATGTGCAGTACAAATA +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCQVAVQ*ICAVQI
Trigger: TATTTGTACTGCACATATCCACTGTACAGCCACTTG...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTTTGAATCAACAGCATTaGCATAAGGGACATAATCTG +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCLNQQH*HKGHNL
Trigger: CAGATTATGTCCCTTATGTCAATGCTGTTGATTCAA...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp AATACATTAAGCATGAAGCCGAAAGGTTCAGTTTCTTTACCTCTCCATTTCTTACTGGAATGCTTTCTATaGCCAGATAAATCAGTAACA +
Preference number: 4 (lower is better)
Translates to: NTLSMKPKGSVSLPLHFLLECFL*PDKSVT
Trigger: TGTTACTGATTTATCTGGTCATAGAAAGCATTCCAG...TAAGAAATGGAGAGGTAAAGAAACTGAACCTTTCGGCTTCATGCTTAATGTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398671.2
CDS-3UTR TCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTCACAAATCTGATGCATaGCTTGTTGAACACATTGTA +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCHKSDA*LVEHIV
Trigger: TACAATGTGTTCAACAAGTCATGCATCAGATTTGTG...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR TCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTTTATCAGTCACCTTATaGGCATGTTCATTAAGACAG +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCLSVTL*ACSLRQ
Trigger: CTGTCTTAATGAACATGCTCATAAGGTGACTGATAA...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAAAACTGATGGGTTTGTaGACATTCTCATCAAATTCA +
Preference number: 4 (lower is better)
Translates to: YFQMPSQNHFSHILARQKKLMGL*TFSSNS
Trigger: TGAATTTGATGAGAATGTGCACAAACCCATCAGTTT...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR GCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTACAATAGGTAACATATaGAGTTTGGTTACCCACATT +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSTIGNI*SLVTHI
Trigger: AATGTGGGTAACCAAACTGCATATGTTACCTATTGT...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTGAAATTCCTACAAATTaGCGTGCATCCTGTAATTTT +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSEIPTN*RASCNF
Trigger: AAAATTACAGGATGCACGGCAATTTGTAGGAATTTC...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAAAACCAATGCATAGTTaGAATGCAACTTTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPKPMHS*NATFPF
Trigger: AAAGGGAAAAGTTGCATTGCAACTATGCATTGGTTT...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR GCA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCATACAGTATAATTGTTTaGCCAGCTAAGAGAATGCAT +
Preference number: 4 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPYSIIV*PAKRMH
Trigger: ATGCATTCTCTTAGCTGGGCAAACAATTATACTGTA...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTTTCATTATAGCAGATTaGACAGGACAGAAATTCTGT +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSFIIAD*TGQKFC
Trigger: ACAGAATTTCTGTCCTGTCCAATCTGCTATAATGAA...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTAATTCCAATCATTTCTaGAAAGTGAACATGTTACCC +
Preference number: 4 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSNSNHF*KVNMLP
Trigger: GGGTAACATGTTCACTTTCCAGAAATGATTGGAATT...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CCA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTGTGTCTGTGTTCCACTaGTTTGGGAATATTTTAAAA +
Preference number: 4 (lower is better)
Translates to: HREWMQHRIISTQKQFLCVSVFH*FGNILK
Trigger: TTTTAAAATATTCCCAAACCAGTGGAACACAGACAC...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS CCA 90 bp TTTCACGACCTCAAACTCCATCGGGAGCTACAGGGACAGCCCCGTTaGCGGCGGCGAAGGCCGCGACGGGGCCTCCTCCTCCTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: FHDLKLHRELQGQPR*RRRRPRRGLLLLPP
Trigger: TGGAGGGAGGAGGAGGAGGCCCCGTCGCGGCCTTCGCCGCCGCCAACGGGGCTGTCCCTGTAGCTCCCGATGGAGTTTGAGGTCGTGAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000423239.6
CDS-3UTR CAA 90 bp CAGAAGGTACTGGAGGAACTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGCTGCCTGCACAGGCATaGTGGAAGCTGGATGCTCGG +
Preference number: 5 (lower is better)
Translates to: QKVLEELVHTAAEEEAGKLPAQA*WKLDAR
Trigger: CCGAGCATCCAGCTTCCACAATGCCTGTGCAGGCAG...CTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp CAGAAGGTACTGGAGGAACTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGTTGTCCTTGGCTCACTaGGTGGCTGACAAGCCACCG +
Preference number: 5 (lower is better)
Translates to: QKVLEELVHTAAEEEAGKLSLAH*VADKPP
Trigger: CGGTGGCTTGTCAGCCACCAAGTGAGCCAAGGACAA...CTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp ACAAAGCGAGGAACACAGGGAGCCACACCAGCTGGTACCGTTGGAGGTGGTGGACCAGTTTCCTTTGCATaGGACGGCTCAGTGCACTCT +
Preference number: 5 (lower is better)
Translates to: TKRGTQGATPAGTVGGGGPVSFA*DGSVHS
Trigger: AGAGTGCACTGAGCCGTCCAATGCAAAGGAAACTGG...TCCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp CAGAAGGTACTGGAGGAACTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGTCTTGTATTTGCTGTTaGGCTGAGGCTGAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: QKVLEELVHTAAEEEAGKSCICC*AEAEGS
Trigger: AGACCCCTCAGCCTCAGCCAAACAGCAAATACAAGA...CTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp GTGACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTTAGTCGCACTTCCTaGGGAAGCAGTGGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: VTAFIQGIPLLLHGQSIGLSRTS*GSSGLD
Trigger: GTCCAGGCCACTGCTTCCCAAGGAAGTGCGACTAAG...GCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
CDS-3UTR CAA 90 bp CTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGGAGAAGAATTCATTCGATCCAGCTGCTCCCAAGTaGGTGAAACAGCGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: LVHTAAEEEAGKEKNSFDPAAPK*VKQRLD
Trigger: ATCCAGACGCTGTTTCACCAACTTGGGAGCAGCTGG...ATCGAATGAATTCTTCTCCTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp CTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGGAGAAGAATTCATTCGATGAGGAGAAGGTGGTGTaGGTGACTGTGTTGCCACAG +
Preference number: 5 (lower is better)
Translates to: LVHTAAEEEAGKEKNSFDEEKVV*VTVLPQ
Trigger: CTGTGGCAACACAGTCACCAACACCACCTTCTCCTC...ATCGAATGAATTCTTCTCCTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTTCGTGGACAACCCCCTaGCTGTCGCAAATCTCGGCA +
Preference number: 5 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSSWTTP*LSQISA
Trigger: TGCCGAGATTTGCGACAGCAAGGGGGTTGTCCACGA...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAACAGGGACAGCCCCGTaGGCGGCGGCGAAGGCCGCG +
Preference number: 5 (lower is better)
Translates to: YFQMPSQNHFSHILARQKTGTAP*AAAKAA
Trigger: CGCGGCCTTCGCCGCCGCCAACGGGGCTGTCCCTGT...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000357244.7
CDS TCA 90 bp CGAGCTGCTCGCATGGCTCTTACACGACCTTCTTCCTCCACCAGTTaGCAGTTTACAAGTGTCACCAGTTTCCTTTGCATTGGACGGCTC +
Preference number: 5 (lower is better)
Translates to: RAARMALTRPSSSTS*QFTSVTSFLCIGRL
Trigger: GAGCCGTCCAATGCAAAGGAAACTGGTGACACTTGTAAACTGTCAACTGGTGGAGGAAGAAGGTCGTGTAAGAGCCATGCGAGCAGCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000471874.2
ENST00000478216.1
ENST00000498479.5
CDS-3UTR CAA 90 bp CAAGAGGTGCTTTCTGAGTGTGGTACTGTGCCCACTGATCTGGCTTTCTTCTTATCGTGGACAACCCCCTaGCTGTCGCAAATCTCGGCA +
Preference number: 5 (lower is better)
Translates to: QEVLSECGTVPTDLAFFLSWTTP*LSQISA
Trigger: TGCCGAGATTTGCGACAGCAAGGGGGTTGTCCACGA...TAAGAAGAAAGCCAGATCAGTGGGCACAGTACCACACTCAGAAAGCACCTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGATTGTCCTTGGCTCACTaGGTGGCTGACAAGCCACCG +
Preference number: 5 (lower is better)
Translates to: LICGLDALYSLASKGIQGLSLAH*VADKPP
Trigger: CGGTGGCTTGTCAGCCACCAAGTGAGCCAAGGACAA...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACCTTAGTCGCACTTCCTaGGGAAGCAGTGGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHLSRTS*GSSGLD
Trigger: GTCCAGGCCACTGCTTCCCAAGGAAGTGCGACTAAG...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp GACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTGGAATTCCACTTCTGTaGCATGGCCAAAGCATTGGC +
Preference number: 5 (lower is better)
Translates to: DGLHPGNSTSVAWPKHWPGIPLL*HGQSIG
Trigger: GCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCC...AGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398671.2
ENST00000498479.5
CDS-3UTR CAA 90 bp ACAAAGCGAGGAACACAGGGAGCCACACCAGCTGGTACCGTTGGAGGTGGTGGACCTAAACTGATGGGTTaGTGCACATTCTCATCAAAT +
Preference number: 5 (lower is better)
Translates to: TKRGTQGATPAGTVGGGGPKLMG*CTFSSN
Trigger: ATTTGATGAGAATGTGCACAAACCCATCAGTTTAGG...TCCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp AAGGTGACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTTGTCACCAGTTTCCTTaGCATTGGACGGCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: KVTAFIQGIPLLLHGQSICHQFP*HWTAQC
Trigger: GCACTGAGCCGTCCAATGCAAAGGAAACTGGTGACA...AATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp ATCTTGCTCTGTCGTCCACACAGGAGTATAGTGGCGCCATCTCGGCTCACTGCATTCTTCCTCCACCAGTaGACAGTTTACAAGTGTCAC +
Preference number: 5 (lower is better)
Translates to: ILLCRPHRSIVAPSRLTAFFLHQ*TVYKCH
Trigger: GTGACACTTGTAAACTGTCAACTGGTGGAGGAAGAA...TGCAGTGAGCCGAGATGGCGCCACTATACTCCTGTGTGGACGACAGAGCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CAA 90 bp CAGAAGGTACTGGAGGAACTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGTTACTTACAGGAGTCTaGGGTGGAGAACCAATTTTA +
Preference number: 5 (lower is better)
Translates to: QKVLEELVHTAAEEEAGKLLTGV*GGEPIL
Trigger: TAAAATTGGTTCTCCACCCAAGACTCCTGTAAGTAA...CTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAGTTCCTCCAGTACCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp CCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCGACTCTGGAACGTTATaGGACCTCACAAAGCGAGGA +
Preference number: 5 (lower is better)
Translates to: PSSREFHFCCMAKALASLDSGTL*DLTKRG
Trigger: TCCTCGCTTTGTGAGGTCCAATAACGTTCCAGAGTC...GAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp GGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAGCAAGAAGACCACAAGGTTCCCTaGGTAAAGGCACAGTTGTCC +
Preference number: 5 (lower is better)
Translates to: GRQLALLIDTGSGWLKQEDHKVP*VKAQLS
Trigger: GGACAACTGTGCCTTTACCAAGGGAACCTTGTGGTC...TTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp GGTGATGGGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAGGAATTCCACTTCTGTaGCATGGCCAAAGCATTGGC +
Preference number: 5 (lower is better)
Translates to: GDGEATCIANRHWEWLAKGIPLL*HGQSIG
Trigger: GCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCC...TTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CAA 90 bp GGTGATGGGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAGGGAGGCAACTTGCATaGCTAATAGACACTGGGAGT +
Preference number: 5 (lower is better)
Translates to: GDGEATCIANRHWEWLAKGRQLA*LIDTGS
Trigger: ACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCC...TTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CAA 90 bp ACAAAGCGAGGAACACAGGGAGCCACACCAGCTGGTACCGTTGGAGGTGGTGGAAAGGCTACTGTGCTGTaGTTATGCTACAAACAAACA +
Preference number: 5 (lower is better)
Translates to: TKRGTQGATPAGTVGGGGKATVL*LCYKQT
Trigger: TGTTTGTTTGTAGCATAACAACAGCACAGTAGCCTT...TCCACCACCTCCAACGGTACCAGCTGGTGTGGCTCCCTGTGTTCCTCGCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp ATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGTTGGTAAAGGCACAGTaGTCCTTGGCTCACTTGGTG +
Preference number: 5 (lower is better)
Translates to: IQGIPLLLHGQSIGLSLKLVKAQ*SLAHLV
Trigger: CACCAAGTGAGCCAAGGACAACTGTGCCTTTACCAA...CTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp ATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGGTGTTGGTGACTGTGTaGCCACAGGAAGAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: IQGIPLLLHGQSIGLSLKVLVTV*PQEELK
Trigger: CTTCAACTCTTCCTGTGGCAACACAGTCACCAACAC...CTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp GGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAGCAAGAAGATGATGTGGCCTCGTaGCCATATGAACTCCACCTT +
Preference number: 5 (lower is better)
Translates to: GRQLALLIDTGSGWLKQEDDVAS*PYELHL
Trigger: AAGGTGGAGTTCATATGGCAACGAGGCCACATCATC...TTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CAA 90 bp GACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCGGCAGAATTGTTTTTaGCTCCTCCAGAATCACATG +
Preference number: 5 (lower is better)
Translates to: DGLHPGNSTSVAWPKHWPRQNCF*LLQNHM
Trigger: CATGTGATTCTGGAGGAGCAAAAAACAATTCTGCCG...AGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp AAGGTGACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGGAGGCAACTTGCATaGCTAATAGACACTGGGAGT +
Preference number: 5 (lower is better)
Translates to: KVTAFIQGIPLLLHGQSIGRQLA*LIDTGS
Trigger: ACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCC...AATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp GGTGATGGGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAGTTTTCAGAATGAGGTaGCCAGCACTGACAGATGTG +
Preference number: 5 (lower is better)
Translates to: GDGEATCIANRHWEWLAKVFRMR*PALTDV
Trigger: CACATCTGTCAGTGCTGGCAACCTCATTCTGAAAAC...TTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CAA 90 bp CTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGGAGAAGAATTCATTCGATTCCTGTTTAAGCATCTaGCTAGCAGGAAAAGCCCTT +
Preference number: 5 (lower is better)
Translates to: LVHTAAEEEAGKEKNSFDSCLSI*LAGKAL
Trigger: AAGGGCTTTTCCTGCTAGCAAGATGCTTAAACAGGA...ATCGAATGAATTCTTCTCCTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS GCA 90 bp TTCATTATAGCAGATTGGACAGGACAGAAATTCTGTCCATTGAGCTaGCTGCACAGGCATTGTGGAAGCTGGATGCTCGGGTTAGCAGTC +
Preference number: 5 (lower is better)
Translates to: FIIADWTGQKFCPLS*LHRHCGSWMLGLAV
Trigger: GACTGCTAACCCGAGCATCCAGCTTCCACAATGCCTGTGCAGGCAGCTCAATGGACAGAATTTCTGTCCTGTCCAATCTGCTATAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000498479.5
CDS GCA 90 bp CTCCTCCCTAAACTCTGTTTCTTCTGCTTTGGTGGCTCCTTTTGGTaGTGCTGTACTGGATGCCCATTTTCCACTGCCATTCCATTTAGC +
Preference number: 5 (lower is better)
Translates to: LLPKLCFFCFGGSFW*CCTGCPFSTAIPFS
Trigger: GCTAAATGGAATGGCAGTGGAAAATGGGCATCCAGTACAGCAGCACCAAAAGGAGCCACCAAAGCAGAAGAAACAGAGTTTAGGGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454740.5
CDS CCA 90 bp CTCCACCAGTTGACAGTTTACAAGTGTCACCAGTTTCCTTTGCATTaGACGGCTCAGTGCACTCTGGTTCAAGCTAGCTACACCTTTACC +
Preference number: 5 (lower is better)
Translates to: LHQLTVYKCHQFPLH*TAQCTLVQASYTFT
Trigger: GGTAAAGGTGTAGCTAGCTTGAACCAGAGTGCACTGAGCCGTCCAATGCAAAGGAAACTGGTGACACTTGTAAACTGTCAACTGGTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000471874.2
ENST00000498479.5
CDS-3UTR CAA 90 bp TCAGGTATGGACAAGCTGAATGTATTTCCTGGAGTCTCCCAAATTATCTTGATGCTGCCTGCACAGGCATaGTGGAAGCTGGATGCTCGG +
Preference number: 5 (lower is better)
Translates to: SGMDKLNVFPGVSQIILMLPAQA*WKLDAR
Trigger: CCGAGCATCCAGCTTCCACAATGCCTGTGCAGGCAG...CATCAAGATAATTTGGGAGACTCCAGGAAATACATTCAGCTTGTCCATACCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CAA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCCTGCCTGCACAGGCATaGTGGAAGCTGGATGCTCGG +
Preference number: 5 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCLPAQA*WKLDAR
Trigger: CCGAGCATCCAGCTTCCACAATGCCTGTGCAGGCAG...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTTCTTCCTCCACCAGTaGACAGTTTACAAGTGTCAC +
Preference number: 5 (lower is better)
Translates to: PSSREFHFCCMAKALASLFFLHQ*TVYKCH
Trigger: GTGACACTTGTAAACTGTCAACTGGTGGAGGAAGAA...GAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp ATCTTGCTCTGTCGTCCACACAGGAGTATAGTGGCGCCATCTCGGCTCACTGCAGACCAATACTTGTTTTaGATGCCTGAGGAAATCTTG +
Preference number: 5 (lower is better)
Translates to: ILLCRPHRSIVAPSRLTADQYLF*MPEEIL
Trigger: CAAGATTTCCTCAGGCATCAAAAACAAGTATTGGTC...TGCAGTGAGCCGAGATGGCGCCACTATACTCCTGTGTGGACGACAGAGCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CAA 90 bp GGTGATGGGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAATTCCTGGACACTCTTaGCAAATGACTCTGGAGACT +
Preference number: 5 (lower is better)
Translates to: GDGEATCIANRHWEWLAKIPGHS*QMTLET
Trigger: AGTCTCCAGAGTCATTTGCAAAGAGTGTCCAGGAAT...TTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGAGGGCAAATGTACAATTaGTTCCTCGTGGACAACCCC +
Preference number: 5 (lower is better)
Translates to: LICGLDALYSLASKGIQGGQMYN*FLVDNP
Trigger: GGGGTTGTCCACGAGGAACAAATTGTACATTTGCCC...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTTTGCCACAGGAAGAGTaGAAGAGACAAGAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSLPQEE*KRQEVL
Trigger: AAGCACCTCTTGTCTCTTCAACTCTTCCTGTGGCAA...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGAGTGTTGGTGACTGTGTaGCCACAGGAAGAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: LICGLDALYSLASKGIQGVLVTV*PQEELK
Trigger: CTTCAACTCTTCCTGTGGCAACACAGTCACCAACAC...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGGAGAAGAATTCATTCGATTTAGCAATGACATCTTaGGGCTCTGAATCAATGGCA +
Preference number: 5 (lower is better)
Translates to: LVHTAAEEEAGKEKNSFDLAMTS*GSESMA
Trigger: TGCCATTGATTCAGAGCCCAAAGATGTCATTGCTAA...ATCGAATGAATTCTTCTCCTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACGGAATTCCACTTCTGTaGCATGGCCAAAGCATTGGC +
Preference number: 5 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHGIPLL*HGQSIG
Trigger: GCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCC...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp CTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGGAGAAGAATTCATTCGATCCAAGATCTCTTCAATaGGTTCACTTTGTCCATCAG +
Preference number: 5 (lower is better)
Translates to: LVHTAAEEEAGKEKNSFDPRSLQ*VHFVHQ
Trigger: CTGATGGACAAAGTGAACCAATTGAAGAGATCTTGG...ATCGAATGAATTCTTCTCCTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp ATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGGTTTTCAGAATGAGGTaGCCAGCACTGACAGATGTG +
Preference number: 5 (lower is better)
Translates to: IQGIPLLLHGQSIGLSLKVFRMR*PALTDV
Trigger: CACATCTGTCAGTGCTGGCAACCTCATTCTGAAAAC...CTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp GGTGATGGGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAACTAATGCAAGAGGGCTaGAAGTATCAAAGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: GDGEATCIANRHWEWLAKLMQEG*KYQRVH
Trigger: GTGGACTCTTTGATACTTCAAGCCCTCTTGCATTAG...TTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CAA 90 bp AATAATGTCATCTCGTTGGTACATAGGTGGGCGCCAGATGCGCCTGCTGTCGTACTAATGCAAGAGGGCTaGAAGTATCAAAGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: NNVISLVHRWAPDAPAVVLMQEG*KYQRVH
Trigger: GTGGACTCTTTGATACTTCAAGCCCTCTTGCATTAG...TACGACAGCAGGCGCATCTGGCGCCCACCTATGTACCAACGAGATGACATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGATGTGGTCTTGACGCCTaGTATTCCCTTGCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: LICGLDALYSLASKGIQGCGLDA*YSLASK
Trigger: TTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACA...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTATGCACTTCCATGCCTaGGGTTATAAAGTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSMHFHA*GYKVRP
Trigger: AGGCCTCACTTTATAACCCAAGGCATGGAAGTGCAT...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS GCA 90 bp CTCCCTAAACTCTGTTTCTTCTGCTTTGGTGGCTCCTTTTGGTGCTaGTGTACTGGATGCCCATTTTCCACTGCCATTCCATTTAGCAAC +
Preference number: 5 (lower is better)
Translates to: LPKLCFFCFGGSFWC*CTGCPFSTAIPFSN
Trigger: GTTGCTAAATGGAATGGCAGTGGAAAATGGGCATCCAGTACAGCAGCACCAAAAGGAGCCACCAAAGCAGAAGAAACAGAGTTTAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454740.5
CDS CCA 90 bp GACAGGACAGAAATTCTGTCCATTGAGCTGCCTGCACAGGCATTGTaGAAGCTGGATGCTCGGGTTAGCAGTCTAGCAGATCATTATTTT +
Preference number: 5 (lower is better)
Translates to: DRTEILSIELPAQAL*KLDARVSSLADHYF
Trigger: AAAATAATGATCTGCTAGACTGCTAACCCGAGCATCCAGCTTCCACAATGCCTGTGCAGGCAGCTCAATGGACAGAATTTCTGTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000498479.5
CDS CCA 90 bp TCAGTTCTGTTACAGTTCTTTCTCCAAGGGAACGAGCTGCTCGCATaGCTCTTACACGACCTTCTTCCTCCACCAGTTGACAGTTTACAA +
Preference number: 5 (lower is better)
Translates to: SVLLQFFLQGNELLA*LLHDLLPPPVDSLQ
Trigger: TTGTAAACTGTCAACTGGTGGAGGAAGAAGGTCGTGTAAGAGCCATGCGAGCAGCTCGTTCCCTTGGAGAAAGAACTGTAACAGAACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000471874.2
ENST00000478216.1
ENST00000498479.5
CDS CCA 90 bp TTGCTCCTCCCTAAACTCTGTTTCTTCTGCTTTGGTGGCTCCTTTTaGTGCTGCTGTACTGGATGCCCATTTTCCACTGCCATTCCATTT +
Preference number: 5 (lower is better)
Translates to: LLLPKLCFFCFGGSF*CCCTGCPFSTAIPF
Trigger: AAATGGAATGGCAGTGGAAAATGGGCATCCAGTACAGCAGCACCAAAAGGAGCCACCAAAGCAGAAGAAACAGAGTTTAGGGAGGAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454740.5
CDS-3UTR CAA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCCCTAAACTGATGGGTTaGTGCACATTCTCATCAAAT +
Preference number: 5 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLPKLMG*CTFSSN
Trigger: ATTTGATGAGAATGTGCACAAACCCATCAGTTTAGG...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CAA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCTTATTCAAGCAGGTCTaGCAAACAGTGTGTGAACAA +
Preference number: 5 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLLFKQV*QTVCEQ
Trigger: TTGTTCACACACTGTTTGCAAGACCTGCTTGAATAA...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CAA 90 bp CTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGGAGAAGAATTCATTCGATCCTCAACGCATTTCTTaGCAACCTCATAGTGTTTAT +
Preference number: 5 (lower is better)
Translates to: LVHTAAEEEAGKEKNSFDPQRIS*QPHSVY
Trigger: ATAAACACTATGAGGTTGCAAAGAAATGCGTTGAGG...ATCGAATGAATTCTTCTCCTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTTTCTTCCTCCACCAGTaGACAGTTTACAAGTGTCAC +
Preference number: 5 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSFFLHQ*TVYKCH
Trigger: GTGACACTTGTAAACTGTCAACTGGTGGAGGAAGAA...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CTGCCCGGGTTGGAATACAGTGGTATAATCTCAGTTCACGGCAGACCTGACCTCCAACATGACCAATACTaGTTTTTGATGCCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: LPGLEYSGIISVHGRPDLQHDQY*FLMPEE
Trigger: TTCCTCAGGCATCAAAAACAAGTATTGGTCATGTTG...GAGGTCAGGTCTGCCGTGAACTGAGATTATACCACTGTATTCCAACCCGGGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CAA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGACCAGCTGCTCCCAAGTaGGTGAAACAGCGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: DISRYHSEEGSDELPFLRPAAPK*VKQRLD
Trigger: ATCCAGACGCTGTTTCACCAACTTGGGAGCAGCTGG...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TCAGGTATGGACAAGCTGAATGTATTTCCTGGAGTCTCCCAAATTATCTTGATGTCGTGGACAACCCCCTaGCTGTCGCAAATCTCGGCA +
Preference number: 5 (lower is better)
Translates to: SGMDKLNVFPGVSQIILMSWTTP*LSQISA
Trigger: TGCCGAGATTTGCGACAGCAAGGGGGTTGTCCACGA...CATCAAGATAATTTGGGAGACTCCAGGAAATACATTCAGCTTGTCCATACCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CAA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACAATAATGTCATCTCGTaGGTACATAGGTGGGCGCCA +
Preference number: 5 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHNNVIS*VHRWAP
Trigger: TGGCGCCCACCTATGTACCAACGAGATGACATTATT...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTGACCACAAGGTTCCCTaGGTAAAGGCACAGTTGTCC +
Preference number: 5 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFDHKVP*VKAQLS
Trigger: GGACAACTGTGCCTTTACCAAGGGAACCTTGTGGTC...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp CAAGAGGTGCTTTCTGAGTGTGGTACTGTGCCCACTGATCTGGCTTTCTTCTTATTGCCACAGGAAGAGTaGAAGAGACAAGAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: QEVLSECGTVPTDLAFFLLPQEE*KRQEVL
Trigger: AAGCACCTCTTGTCTCTTCAACTCTTCCTGTGGCAA...TAAGAAGAAAGCCAGATCAGTGGGCACAGTACCACACTCAGAAAGCACCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGCTTAGTCGCACTTCCTaGGGAAGCAGTGGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQLSRTS*GSSGLD
Trigger: GTCCAGGCCACTGCTTCCCAAGGAAGTGCGACTAAG...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CAAGAGGTGCTTTCTGAGTGTGGTACTGTGCCCACTGATCTGGCTTTCTTCTTATCTGTTTCTTCTGCTTaGGTGGCTCCTTTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: QEVLSECGTVPTDLAFFLSVSSA*VAPFGA
Trigger: AGCACCAAAAGGAGCCACCAAAGCAGAAGAAACAGA...TAAGAAGAAAGCCAGATCAGTGGGCACAGTACCACACTCAGAAAGCACCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTTCCTGTTTAAGCATCTaGCTAGCAGGAAAAGCCCTT +
Preference number: 5 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSSCLSI*LAGKAL
Trigger: AAGGGCTTTTCCTGCTAGCAAGATGCTTAAACAGGA...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTGCAAGGGAATCTGCTTaGTTCAGGTACCAACTAGAA +
Preference number: 5 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSARESA*FRYQLE
Trigger: TTCTAGTTGGTACCTGAACAAAGCAGATTCCCTTGC...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCACAAATGTGGGGTGTTTaGATCTGTGGTCTTGACGCC +
Preference number: 5 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSQMWGV*ICGLDA
Trigger: GGCGTCAAGACCACAGATCAAAACACCCCACATTTG...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACAAATGCAGACAGCAGTaGCTGCAAGCTAACCACGAT +
Preference number: 5 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHKCRQQ*LQANHD
Trigger: ATCGTGGTTAGCTTGCAGCAACTGCTGTCTGCATTT...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAGCAAGAACGGCAGAATTGTTTTTaGCTCCTCCCTAAACTCTGT +
Preference number: 5 (lower is better)
Translates to: GRQLALLIDTGSGWLKQERQNCF*LLPKLC
Trigger: ACAGAGTTTAGGGAGGAGCAAAAAACAATTCTGCCG...TTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454740.5
CDS-3UTR CAA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAACTGCCTGCACAGGCATaGTGGAAGCTGGATGCTCGG +
Preference number: 5 (lower is better)
Translates to: YFQMPSQNHFSHILARQKLPAQA*WKLDAR
Trigger: CCGAGCATCCAGCTTCCACAATGCCTGTGCAGGCAG...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp TGCTGCAAGCTAACCACGATACTCCCAAGTGGCTGTACAGTGGATATGTGCAGTTGGAGAAGTGCGAAGTaGACAGGAAGTACATCAATA +
Preference number: 5 (lower is better)
Translates to: CCKLTTILPSGCTVDMCSWRSAK*TGSTSI
Trigger: TATTGATGTACTTCCTGTCAACTTCGCACTTCTCCA...ACTGCACATATCCACTGTACAGCCACTTGGGAGTATCGTGGTTAGCTTGCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAACCAGTTTCCTTTGCATaGGACGGCTCAGTGCACTCT +
Preference number: 5 (lower is better)
Translates to: EENGFSAWALIEGGMAMKPVSFA*DGSVHS
Trigger: AGAGTGCACTGAGCCGTCCAATGCAAAGGAAACTGG...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CAA 90 bp ACATTAGAGGGCCCAGCTGAGGTAGCTGCTACATTACTTACAGGAGTCTTGGGTTGGGTCACCTGTTCGTaGCAAAACAATTGTCAATTC +
Preference number: 5 (lower is better)
Translates to: TLEGPAEVAATLLTGVLGWVTCS*QNNCQF
Trigger: GAATTGACAATTGTTTTGCAACGAACAGGTGACCCA...ACCCAAGACTCCTGTAAGTAATGTAGCAGCTACCTCAGCTGGGCCCTCTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp AGAGTAGAGCTAGAGGATAAAATCAGGATGAGATTCTGTGATGTACTGAGGAACCCAGCTGCTCCCAAGTaGGTGAAACAGCGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: RVELEDKIRMRFCDVLRNPAAPK*VKQRLD
Trigger: ATCCAGACGCTGTTTCACCAACTTGGGAGCAGCTGG...GTTCCTCAGTACATCACAGAATCTCATCCTGATTTTATCCTCTAGCTCTACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CAA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGCCAGCTGCTCCCAAGTaGGTGAAACAGCGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQPAAPK*VKQRLD
Trigger: ATCCAGACGCTGTTTCACCAACTTGGGAGCAGCTGG...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTTCTTGTATTTGCTGTTaGGCTGAGGCTGAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFSCICC*AEAEGS
Trigger: AGACCCCTCAGCCTCAGCCAAACAGCAAATACAAGA...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAATCGTGGACAACCCCCTaGCTGTCGCAAATCTCGGCA +
Preference number: 5 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKSWTTP*LSQISA
Trigger: TGCCGAGATTTGCGACAGCAAGGGGGTTGTCCACGA...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp AATAATGTCATCTCGTTGGTACATAGGTGGGCGCCAGATGCGCCTGCTGTCGTAAGGGTATCTGAGTCCTaGGATCTTGAAAATACTGAA +
Preference number: 5 (lower is better)
Translates to: NNVISLVHRWAPDAPAVVRVSES*DLENTE
Trigger: TTCAGTATTTTCAAGATCCAAGGACTCAGATACCCT...TACGACAGCAGGCGCATCTGGCGCCCACCTATGTACCAACGAGATGACATTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTGACTCTGGAACGTTATaGGACCTCACAAAGCGAGGA +
Preference number: 5 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFDSGTL*DLTKRG
Trigger: TCCTCGCTTTGTGAGGTCCAATAACGTTCCAGAGTC...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp ATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAGTGCATCACATCCATaGGAGGTAAAGAATTGCTTC +
Preference number: 5 (lower is better)
Translates to: IQGIPLLLHGQSIGLSLKSASHP*EVKNCF
Trigger: GAAGCAATTCTTTACCTCCAATGGATGTGATGCACT...CTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAATTGTCCTTGGCTCACTaGGTGGCTGACAAGCCACCG +
Preference number: 5 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKLSLAH*VADKPP
Trigger: CGGTGGCTTGTCAGCCACCAAGTGAGCCAAGGACAA...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAGACCACAAGGTTCCCTaGGTAAAGGCACAGTTGTCC +
Preference number: 5 (lower is better)
Translates to: DISRYHSEEGSDELPFLRDHKVP*VKAQLS
Trigger: GGACAACTGTGCCTTTACCAAGGGAACCTTGTGGTC...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTGATGATGTGGCCTCGTaGCCATATGAACTCCACCTT +
Preference number: 5 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFDDVAS*PYELHL
Trigger: AAGGTGGAGTTCATATGGCAACGAGGCCACATCATC...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CAA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTGGAATTCCACTTCTGTaGCATGGCCAAAGCATTGGC +
Preference number: 5 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFGIPLL*HGQSIG
Trigger: GCCAATGCTTTGGCCATGCAACAGAAGTGGAATTCC...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CAA 90 bp GGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAGCAAGAACCAAGATCTCTTCAATaGGTTCACTTTGTCCATCAG +
Preference number: 5 (lower is better)
Translates to: GRQLALLIDTGSGWLKQEPRSLQ*VHFVHQ
Trigger: CTGATGGACAAAGTGAACCAATTGAAGAGATCTTGG...TTCTTGCTTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CAA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCATCTGTTTCTTCTGCTTaGGTGGCTCCTTTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSSVSSA*VAPFGA
Trigger: AGCACCAAAAGGAGCCACCAAAGCAGAAGAAACAGA...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACCGGCAGAATTGTTTTTaGCTCCTCCAGAATCACATG +
Preference number: 5 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHRQNCF*LLQNHM
Trigger: CATGTGATTCTGGAGGAGCAAAAAACAATTCTGCCG...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp TCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAGTAATGAGTTGCTCTCCCAGCAATACCATCTaGTTAGTCAGTGCAAACGCT +
Preference number: 5 (lower is better)
Translates to: SVAWPKHWPLSEEVMSCSPSNTI*LVSANA
Trigger: AGCGTTTGCACTGACTAACAAGATGGTATTGCTGGG...AGAGCAACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp CTGGTCCATACGGCTGCGGAGGAGGAGGCTGGTAAGGAGAAGAATTCATTCGATCTGATGCATGACTTGTaGAACACATTGTATACTTTC +
Preference number: 5 (lower is better)
Translates to: LVHTAAEEEAGKEKNSFDLMHDL*NTLYTF
Trigger: GAAAGTATACAATGTGTTCAACAAGTCATGCATCAG...ATCGAATGAATTCTTCTCCTTACCAGCCTCCTCCTCCGCAGCCGTATGGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACTTTTGTGTAGTTCTGTaGCACAGAGGGTTCTTTCCC +
Preference number: 5 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHFCVVL*HRGFFP
Trigger: GGGAAAGAACCCTCTGTGCAACAGAACTACACAAAA...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACCGTGCTGAAGATGTTTaGTGTAGTTCTGTTGCACAG +
Preference number: 5 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHRAEDV*CSSVAQ
Trigger: CTGTGCAACAGAACTACACAAAACATCTTCAGCACG...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTACGCCTTGTATTCCCTaGCCAGCAAAGGGATACAAG +
Preference number: 5 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFTPCIP*PAKGYK
Trigger: CTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGT...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TCAGGTATGGACAAGCTGAATGTATTTCCTGGAGTCTCCCAAATTATCTTGATGTGTCACCAGTTTCCTTaGCATTGGACGGCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: SGMDKLNVFPGVSQIILMCHQFP*HWTAQC
Trigger: GCACTGAGCCGTCCAATGCAAAGGAAACTGGTGACA...CATCAAGATAATTTGGGAGACTCCAGGAAATACATTCAGCTTGTCCATACCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CAA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCTGTCACCAGTTTCCTTaGCATTGGACGGCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCCHQFP*HWTAQC
Trigger: GCACTGAGCCGTCCAATGCAAAGGAAACTGGTGACA...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp AAGGTGACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTCAACATGACCAATACTaGTTTTTGATGCCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: KVTAFIQGIPLLLHGQSIQHDQY*FLMPEE
Trigger: TTCCTCAGGCATCAAAAACAAGTATTGGTCATGTTG...AATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACTGGGTCACCTGTTCGTaGCAAAACAATTGTCAATTC +
Preference number: 5 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHWVTCS*QNNCQF
Trigger: GAATTGACAATTGTTTTGCAACGAACAGGTGACCCA...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAATCTTGTATTTGCTGTTaGGCTGAGGCTGAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: EENGFSAWALIEGGMAMKSCICC*AEAEGS
Trigger: AGACCCCTCAGCCTCAGCCAAACAGCAAATACAAGA...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CAA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTAATAATGTCATCTCGTaGGTACATAGGTGGGCGCCA +
Preference number: 5 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFNNVIS*VHRWAP
Trigger: TGGCGCCCACCTATGTACCAACGAGATGACATTATT...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGAAGTGCATCACATCCATaGGAGGTAAAGAATTGCTTC +
Preference number: 5 (lower is better)
Translates to: LICGLDALYSLASKGIQGSASHP*EVKNCF
Trigger: GAAGCAATTCTTTACCTCCAATGGATGTGATGCACT...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGATTGGTAAAGGCACAGTaGTCCTTGGCTCACTTGGTG +
Preference number: 5 (lower is better)
Translates to: DISRYHSEEGSDELPFLRLVKAQ*SLAHLV
Trigger: CACCAAGTGAGCCAAGGACAACTGTGCCTTTACCAA...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAAGAGGAGAAGGTGGTGTaGGTGACTGTGTTGCCACAG +
Preference number: 5 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKEEKVV*VTVLPQ
Trigger: CTGTGGCAACACAGTCACCAACACCACCTTCTCCTC...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTCTTAGTCGCACTTCCTaGGGAAGCAGTGGCCTGGAC +
Preference number: 5 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSLSRTS*GSSGLD
Trigger: GTCCAGGCCACTGCTTCCCAAGGAAGTGCGACTAAG...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp AAGGTGACGGCCTTCATCCAGGGAATTCCACTTCTGTTGCATGGCCAAAGCATTTTCAATTGGTTCACTTaGTCCATCAGGTTCATCAGT +
Preference number: 5 (lower is better)
Translates to: KVTAFIQGIPLLLHGQSIFNWFT*SIRFIS
Trigger: ACTGATGAACCTGATGGACAAAGTGAACCAATTGAA...AATGCTTTGGCCATGCAACAGAAGTGGAATTCCCTGGATGAAGGCCGTCACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTTCTGTTTCTTCTGCTTaGGTGGCTCCTTTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFSVSSA*VAPFGA
Trigger: AGCACCAAAAGGAGCCACCAAAGCAGAAGAAACAGA...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CAA 90 bp GGTGATGGGGAGGCAACTTGCATTGCTAATAGACACTGGGAGTGGCTGGCTAAAGACTTGTTGAACACATaGTATACTTTCAGATGCCAA +
Preference number: 5 (lower is better)
Translates to: GDGEATCIANRHWEWLAKDLLNT*YTFRCQ
Trigger: TTGGCATCTGAAAGTATACAATGTGTTCAACAAGTC...TTTAGCCAGCCACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCCCATCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCACTTGAGCATGTTCTTTaGTGTTCTGCTTGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSLEHVL*CSACRR
Trigger: CCTTCTGCAAGCAGAACACAAAAGAACATGCTCAAG...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGATGTGGTCTTGACGCCTaGTATTCCCTTGCCAGCAAA +
Preference number: 5 (lower is better)
Translates to: DISRYHSEEGSDELPFLRCGLDA*YSLASK
Trigger: TTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACA...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACGAACAATTTTCCCTGTaGTTTCAGTACTTCAGTGGC +
Preference number: 5 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHEQFSL*FQYFSG
Trigger: GCCACTGAAGTACTGAAACAACAGGGAAAATTGTTC...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp TCAGGTATGGACAAGCTGAATGTATTTCCTGGAGTCTCCCAAATTATCTTGATGCAGAAATTCTGTCCATaGAGCTGCCTGCACAGGCAT +
Preference number: 5 (lower is better)
Translates to: SGMDKLNVFPGVSQIILMQKFCP*SCLHRH
Trigger: ATGCCTGTGCAGGCAGCTCAATGGACAGAATTTCTG...CATCAAGATAATTTGGGAGACTCCAGGAAATACATTCAGCTTGTCCATACCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CAA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACTTATTCAAGCAGGTCTaGCAAACAGTGTGTGAACAA +
Preference number: 5 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHLFKQV*QTVCEQ
Trigger: TTGTTCACACACTGTTTGCAAGACCTGCTTGAATAA...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp CAAGAGGTGCTTTCTGAGTGTGGTACTGTGCCCACTGATCTGGCTTTCTTCTTATTATTCAAGCAGGTCTaGCAAACAGTGTGTGAACAA +
Preference number: 5 (lower is better)
Translates to: QEVLSECGTVPTDLAFFLLFKQV*QTVCEQ
Trigger: TTGTTCACACACTGTTTGCAAGACCTGCTTGAATAA...TAAGAAGAAAGCCAGATCAGTGGGCACAGTACCACACTCAGAAAGCACCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAACCAGTTTCCTTTGCATaGGACGGCTCAGTGCACTCT +
Preference number: 5 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKPVSFA*DGSVHS
Trigger: AGAGTGCACTGAGCCGTCCAATGCAAAGGAAACTGG...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATCCAGTTTCCTTTGCATaGGACGGCTCAGTGCACTCT +
Preference number: 5 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHPVSFA*DGSVHS
Trigger: AGAGTGCACTGAGCCGTCCAATGCAAAGGAAACTGG...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CAAGAGGTGCTTTCTGAGTGTGGTACTGTGCCCACTGATCTGGCTTTCTTCTTAGACCAATACTTGTTTTaGATGCCTGAGGAAATCTTG +
Preference number: 5 (lower is better)
Translates to: QEVLSECGTVPTDLAFFLDQYLF*MPEEIL
Trigger: CAAGATTTCCTCAGGCATCAAAAACAAGTATTGGTC...TAAGAAGAAAGCCAGATCAGTGGGCACAGTACCACACTCAGAAAGCACCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp TCAGGTATGGACAAGCTGAATGTATTTCCTGGAGTCTCCCAAATTATCTTGATGGGGCAAATGTACAATTaGTTCCTCGTGGACAACCCC +
Preference number: 5 (lower is better)
Translates to: SGMDKLNVFPGVSQIILMGQMYN*FLVDNP
Trigger: GGGGTTGTCCACGAGGAACAAATTGTACATTTGCCC...CATCAAGATAATTTGGGAGACTCCAGGAAATACATTCAGCTTGTCCATACCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CAA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGATTACTTACAGGAGTCTaGGGTGGAGAACCAATTTTA +
Preference number: 5 (lower is better)
Translates to: LICGLDALYSLASKGIQGLLTGV*GGEPIL
Trigger: TAAAATTGGTTCTCCACCCAAGACTCCTGTAAGTAA...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACAGGGTATCTGAGTCCTaGGATCTTGAAAATACTGAA +
Preference number: 5 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHRVSES*DLENTE
Trigger: TTCAGTATTTTCAAGATCCAAGGACTCAGATACCCT...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGGACTCTGGAACGTTATaGGACCTCACAAAGCGAGGA +
Preference number: 5 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQDSGTL*DLTKRG
Trigger: TCCTCGCTTTGTGAGGTCCAATAACGTTCCAGAGTC...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGAGGAGAAGGTGGTGTaGGTGACTGTGTTGCCACAG +
Preference number: 5 (lower is better)
Translates to: YFQMPSQNHFSHILARQKEEKVV*VTVLPQ
Trigger: CTGTGGCAACACAGTCACCAACACCACCTTCTCCTC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACGATCTTCTTCAAATTTaGTACCACTCACACTCTCTG +
Preference number: 5 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHDLLQI*YHSHSL
Trigger: CAGAGAGTGTGAGTGGTACAAAATTTGAAGAAGATC...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCAAAGAACAGGGAGTTATaGTTTTATGGGATCACCTGC +
Preference number: 5 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSKNREL*FYGITC
Trigger: GCAGGTGATCCCATAAAACAATAACTCCCTGTTCTT...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TTGATCTGTGGTCTTGACGCCTTGTATTCCCTTGCCAGCAAAGGGATACAAGGAGGTAACATATGCAGTTaGGTTACCCACATTACACAT +
Preference number: 5 (lower is better)
Translates to: LICGLDALYSLASKGIQGGNICS*VTHITH
Trigger: ATGTGTAATGTGGGTAACCAAACTGCATATGTTACC...TCCTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGTCAAGACCACAGATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACCTAATTCTCGACAGGTaGATGGAATATGTGCAAATG +
Preference number: 5 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHLILDR*MEYVQM
Trigger: CATTTGCACATATTCCATCAACCTGTCGAGAATTAG...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CACCAAAATGCACTCAGTAATGGTATAACCAAGATGCAGCAGCAGAAAACAAATGATGATGTGGCCTCGTaGCCATATGAACTCCACCTG +
Preference number: 5 (lower is better)
Translates to: HQNALSNGITKMQQQKTNDDVAS*PYELHL
Trigger: CAGGTGGAGTTCATATGGCAACGAGGCCACATCATC...ATTTGTTTTCTGCTGCTGCATCTTGGTTATACCATTACTGAGTGCATTTTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398671.2
CDS CCA 90 bp ACTGATGGGTTTGTGCACATTCTCATCAAATTCATTATAGCAGATTaGACAGGACAGAAATTCTGTCCATTGAGCTGCCTGCACAGGCAT +
Preference number: 5 (lower is better)
Translates to: TDGFVHILIKFIIAD*TGQKFCPLSCLHRH
Trigger: ATGCCTGTGCAGGCAGCTCAATGGACAGAATTTCTGTCCTGTCCAATCTGCTATAATGAATTTGATGAGAATGTGCACAAACCCATCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000471874.2
ENST00000498479.5
CDS-3UTR CAA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCACCTCAACGCATTTCTTaGCAACCTCATAGTGTTTAT +
Preference number: 5 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSPQRIS*QPHSVY
Trigger: ATAAACACTATGAGGTTGCAAAGAAATGCGTTGAGG...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAATGTCACCAGTTTCCTTaGCATTGGACGGCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: YFQMPSQNHFSHILARQKCHQFP*HWTAQC
Trigger: GCACTGAGCCGTCCAATGCAAAGGAAACTGGTGACA...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCAGACCAATACTTGTTTTaGATGCCTGAGGAAATCTTG +
Preference number: 5 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSDQYLF*MPEEIL
Trigger: CAAGATTTCCTCAGGCATCAAAAACAAGTATTGGTC...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAAATTCCTGGACACTCTTaGCAAATGACTCTGGAGACT +
Preference number: 5 (lower is better)
Translates to: EENGFSAWALIEGGMAMKIPGHS*QMTLET
Trigger: AGTCTCCAGAGTCATTTGCAAAGAGTGTCCAGGAAT...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CAA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCATTACTTACAGGAGTCTaGGGTGGAGAACCAATTTTA +
Preference number: 5 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSLLTGV*GGEPIL
Trigger: TAAAATTGGTTCTCCACCCAAGACTCCTGTAAGTAA...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAAGATGATGTGGCCTCGTaGCCATATGAACTCCACCTT +
Preference number: 5 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKDDVAS*PYELHL
Trigger: AAGGTGGAGTTCATATGGCAACGAGGCCACATCATC...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCATTCAATTGGTTCACTTaGTCCATCAGGTTCATCAGT +
Preference number: 5 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSFNWFT*SIRFIS
Trigger: ACTGATGAACCTGATGGACAAAGTGAACCAATTGAA...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATGGGAGGCAACTTGCATaGCTAATAGACACTGGGAGT +
Preference number: 5 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHGRQLA*LIDTGS
Trigger: ACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCC...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCAAAGCACCTGATTCTTTaGCCAAGTCATCAGATTCAA +
Preference number: 5 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSKHLIL*PSHQIQ
Trigger: TTGAATCTGATGACTTGGCAAAAGAATCAGGTGCTT...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TCTGTTGCATGGCCAAAGCATTGGCCTCTCTCTGAAGAAGTAATGAGTTGCTCTAAGCACCTGATTCTTTaGCCAAGTCATCAGATTCAA +
Preference number: 5 (lower is better)
Translates to: SVAWPKHWPLSEEVMSCSKHLIL*PSHQIQ
Trigger: TTGAATCTGATGACTTGGCAAAAGAATCAGGTGCTT...AGAGCAACTCATTACTTCTTCAGAGAGAGGCCAATGCTTTGGCCATGCAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGATCCTGTTTAAGCATCTaGCTAGCAGGAAAAGCCCTT +
Preference number: 5 (lower is better)
Translates to: DISRYHSEEGSDELPFLRSCLSI*LAGKAL
Trigger: AAGGGCTTTTCCTGCTAGCAAGATGCTTAAACAGGA...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCAGTACATCACATCTTGTaGGTAAAAAGGCCAAATGAC +
Preference number: 5 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSVHHIL*VKRPND
Trigger: GTCATTTGGCCTTTTTACCAACAAGATGTGATGTAC...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACTCCTCTCTTGTTGCTTaGTATCCTTTGATTCCAAAT +
Preference number: 5 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHSSLVA*YPLIPN
Trigger: ATTTGGAATCAAAGGATACAAAGCAACAAGAGAGGA...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CTAATCAAGAAATTTCAGGGAAATGTCAACCCTCCCGCCCCTGGAAATGTGCACAAAATGGGATACTCCTaGAGCATGTTCTTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: LIKKFQGNVNPPAPGNVHKMGYS*SMFFCV
Trigger: AACACAAAAGAACATGCTCAAGGAGTATCCCATTTT...GTGCACATTTCCAGGGGCGGGAGGGTTGACATTTCCCTGAAATTTCTTGATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATCAAATGTGGGGTGTTTaGATCTGTGGTCTTGACGCC +
Preference number: 5 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHQMWGV*ICGLDA
Trigger: GGCGTCAAGACCACAGATCAAAACACCCCACATTTG...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCATGCACTTCCATGCCTaGGGTTATAAAGTGAGGCCT +
Preference number: 5 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCMHFHA*GYKVRP
Trigger: AGGCCTCACTTTATAACCCAAGGCATGGAAGTGCAT...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTCAATCGGTTGTACAATaGACAAACAGGCCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFQSVVQ*TNRPLF
Trigger: GAAAAGAGGCCTGTTTGTCAATTGTACAACCGATTG...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS CCA 90 bp AAGTTAGCTGGGTCACCTGTTCGTTGCAAAACAATTGTCAATTCCTaGACACTCTTTGCAAATGACTCTGGAGACTGTAGCTTATCAATG +
Preference number: 5 (lower is better)
Translates to: KLAGSPVRCKTIVNS*TLFANDSGDCSLSM
Trigger: CATTGATAAGCTACAGTCTCCAGAGTCATTTGCAAAGAGTGTCCAGGAATTGACAATTGTTTTGCAACGAACAGGTGACCCAGCTAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000498479.5
CDS CCA 90 bp GTCTCCAGAGCTCTTAAGGTACTGTCAGTACTACGTGAGATTAGCTaGGAAACACTGTTTTCTGCATTTGAAATTCCGTTTGTACTTGGA +
Preference number: 5 (lower is better)
Translates to: VSRALKVLSVLREIS*ETLFSAFEIPFVLG
Trigger: TCCAAGTACAAACGGAATTTCAAATGCAGAAAACAGTGTTTCCCAGCTAATCTCACGTAGTACTGACAGTACCTTAAGAGCTCTGGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000498479.5
CDS-3UTR CAA 90 bp GAAGAAAATGGATTTTCAGCCTGGGCACTAATTGAGGGTGGAATGGCAATGAAATGGAGAAGTGCGAAGTaGACAGGAAGTACATCAATA +
Preference number: 5 (lower is better)
Translates to: EENGFSAWALIEGGMAMKWRSAK*TGSTSI
Trigger: TATTGATGTACTTCCTGTCAACTTCGCACTTCTCCA...TTTCATTGCCATTCCACCCTCAATTAGTGCCCAGGCTGAAAATCCATTTTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CAA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGTTCTTCCTCCACCAGTaGACAGTTTACAAGTGTCAC +
Preference number: 5 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQFFLHQ*TVYKCH
Trigger: GTGACACTTGTAAACTGTCAACTGGTGGAGGAAGAA...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGATTCCTGGACACTCTTaGCAAATGACTCTGGAGACT +
Preference number: 5 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQIPGHS*QMTLET
Trigger: AGTCTCCAGAGTCATTTGCAAAGAGTGTCCAGGAAT...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCATTCCTGGACACTCTTaGCAAATGACTCTGGAGACT +
Preference number: 5 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCIPGHS*QMTLET
Trigger: AGTCTCCAGAGTCATTTGCAAAGAGTGTCCAGGAAT...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTGGGCAAATGTACAATTaGTTCCTCGTGGACAACCCC +
Preference number: 5 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSGQMYN*FLVDNP
Trigger: GGGGTTGTCCACGAGGAACAAATTGTACATTTGCCC...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATAATAATGTCATCTCGTaGGTACATAGGTGGGCGCCA +
Preference number: 5 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHNNVIS*VHRWAP
Trigger: TGGCGCCCACCTATGTACCAACGAGATGACATTATT...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAGTGTTGGTGACTGTGTaGCCACAGGAAGAGTTGAAG +
Preference number: 5 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPVLVTV*PQEELK
Trigger: CTTCAACTCTTCCTGTGGCAACACAGTCACCAACAC...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAGATGATGTGGCCTCGTaGCCATATGAACTCCACCTT +
Preference number: 5 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPDDVAS*PYELHL
Trigger: AAGGTGGAGTTCATATGGCAACGAGGCCACATCATC...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTTTCAATTGGTTCACTTaGTCCATCAGGTTCATCAGT +
Preference number: 5 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFFNWFT*SIRFIS
Trigger: ACTGATGAACCTGATGGACAAAGTGAACCAATTGAA...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000454740.5
ENST00000498479.5
CDS-3UTR CAA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAATCTGTTTCTTCTGCTTaGGTGGCTCCTTTTGGTGCT +
Preference number: 5 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKSVSSA*VAPFGA
Trigger: AGCACCAAAAGGAGCCACCAAAGCAGAAGAAACAGA...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGCGGCAGAATTGTTTTTaGCTCCTCCAGAATCACATG +
Preference number: 5 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQRQNCF*LLQNHM
Trigger: CATGTGATTCTGGAGGAGCAAAAAACAATTCTGCCG...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTGGGAGGCAACTTGCATaGCTAATAGACACTGGGAGT +
Preference number: 5 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSGRQLA*LIDTGS
Trigger: ACTCCCAGTGTCTATTAGCAATGCAAGTTGCCTCCC...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATCCCAGCAATACCATCTaGTTAGTCAGTGCAAACGCT +
Preference number: 5 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHPSNTI*LVSANA
Trigger: AGCGTTTGCACTGACTAACAAGATGGTATTGCTGGG...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAACCCAGCAATACCATCTaGTTAGTCAGTGCAAACGCT +
Preference number: 5 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKPSNTI*LVSANA
Trigger: AGCGTTTGCACTGACTAACAAGATGGTATTGCTGGG...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp AAACATCTAAGCAGTTTATCCCAACCCCCTCCAGCAGAGCACAACCAAGTTTCATCCTCTCTTGTTGCTTaGTATCCTTTGATTCCAAAT +
Preference number: 5 (lower is better)
Translates to: KHLSSLSQPPPAEHNQVSSSLVA*YPLIPN
Trigger: ATTTGGAATCAAAGGATACAAAGCAACAAGAGAGGA...TGAAACTTGGTTGTGCTCTGCTGGAGGGGGTTGGGATAAACTGCTTAGATGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGGCAAGGGAATCTGCTTaGTTCAGGTACCAACTAGAA +
Preference number: 5 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQARESA*FRYQLE
Trigger: TTCTAGTTGGTACCTGAACAAAGCAGATTCCCTTGC...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGAGTTTATCACATGGCATaGAAAATAAGACGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: DISRYHSEEGSDELPFLRVYHMA*KIRRGS
Trigger: GCTGCCACGTCTTATTTTCAATGCCATGTGATAAAC...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCCTTGAGCATGTTCTTTaGTGTTCTGCTTGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCLEHVL*CSACRR
Trigger: CCTTCTGCAAGCAGAACACAAAAGAACATGCTCAAG...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAACGCCTTGTATTCCCTaGCCAGCAAAGGGATACAAG +
Preference number: 5 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPTPCIP*PAKGYK
Trigger: CTTGTATCCCTTTGCTGGCAAGGGAATACAAGGCGT...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGACCTCAACGCATTTCTTaGCAACCTCATAGTGTTTAT +
Preference number: 5 (lower is better)
Translates to: DISRYHSEEGSDELPFLRPQRIS*QPHSVY
Trigger: ATAAACACTATGAGGTTGCAAAGAAATGCGTTGAGG...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp AGAGTAGAGCTAGAGGATAAAATCAGGATGAGATTCTGTGATGTACTGAGGAACTGGGTCACCTGTTCGTaGCAAAACAATTGTCAATTC +
Preference number: 5 (lower is better)
Translates to: RVELEDKIRMRFCDVLRNWVTCS*QNNCQF
Trigger: GAATTGACAATTGTTTTGCAACGAACAGGTGACCCA...GTTCCTCAGTACATCACAGAATCTCATCCTGATTTTATCCTCTAGCTCTACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CAA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTTCTTGTATTTGCTGTTaGGCTGAGGCTGAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: HREWMQHRIISTQKQFLCSCICC*AEAEGS
Trigger: AGACCCCTCAGCCTCAGCCAAACAGCAAATACAAGA...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGAGTGCATCACATCCATaGGAGGTAAAGAATTGCTTC +
Preference number: 5 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQSASHP*EVKNCF
Trigger: GAAGCAATTCTTTACCTCCAATGGATGTGATGCACT...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTTTGGTAAAGGCACAGTaGTCCTTGGCTCACTTGGTG +
Preference number: 5 (lower is better)
Translates to: HREWMQHRIISTQKQFLCLVKAQ*SLAHLV
Trigger: CACCAAGTGAGCCAAGGACAACTGTGCCTTTACCAA...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTTTGCCACAGGAAGAGTaGAAGAGACAAGAGGTGCTT +
Preference number: 5 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSLPQEE*KRQEVL
Trigger: AAGCACCTCTTGTCTCTTCAACTCTTCCTGTGGCAA...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGTTTTCAGAATGAGGTaGCCAGCACTGACAGATGTG +
Preference number: 5 (lower is better)
Translates to: YFQMPSQNHFSHILARQKVFRMR*PALTDV
Trigger: CACATCTGTCAGTGCTGGCAACCTCATTCTGAAAAC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAATTTTGTGTAGTTCTGTaGCACAGAGGGTTCTTTCCC +
Preference number: 5 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKFCVVL*HRGFFP
Trigger: GGGAAAGAACCCTCTGTGCAACAGAACTACACAAAA...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATCGTGCTGAAGATGTTTaGTGTAGTTCTGTTGCACAG +
Preference number: 5 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHRAEDV*CSSVAQ
Trigger: CTGTGCAACAGAACTACACAAAACATCTTCAGCACG...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGGTTTATCACATGGCATaGAAAATAAGACGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQVYHMA*KIRRGS
Trigger: GCTGCCACGTCTTATTTTCAATGCCATGTGATAAAC...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAATCTTTTGTGTTCTGCTaGCAGAAGGGGTCCTTATGT +
Preference number: 5 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKSFVFC*QKGSLC
Trigger: ACATAAGGACCCCTTCTGCAAGCAGAACACAAAAGA...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GGGCTTGAAGTATCAAAGAGTCCACAGGAAATGGATGCCCCCAGTAATATCTTTAAAATGGGATACTCCTaGAGCATGTTCTTTTGTGTT +
Preference number: 5 (lower is better)
Translates to: GLEVSKSPQEMDAPSNIFKMGYS*SMFFCV
Trigger: AACACAAAAGAACATGCTCAAGGAGTATCCCATTTT...AAAGATATTACTGGGGGCATCCATTTCCTGTGGACTCTTTGATACTTCAAGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAAAATGCAGACAGCAGTaGCTGCAAGCTAACCACGAT +
Preference number: 5 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPKCRQQ*LQANHD
Trigger: ATCGTGGTTAGCTTGCAGCAACTGCTGTCTGCATTT...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGCAATCGGTTGTACAATaGACAAACAGGCCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQQSVVQ*TNRPLF
Trigger: GAAAAGAGGCCTGTTTGTCAATTGTACAACCGATTG...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCGTGAAGAAAACAGCTTaGCCACCTGAAAGAGGAAAT +
Preference number: 5 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCVKKTA*PPERGN
Trigger: ATTTCCTCTTTCAGGTGGCAAAGCTGTTTTCTTCAC...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373670.5
CDS-3UTR CAA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAAGGAACACAAATTACTTaGGACTGCTGGGCGGTTTTT +
Preference number: 5 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKGTQIT*DCWAVF
Trigger: AAAAACCGCCCAGCAGTCCAAAGTAATTTGTGTTCC...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373670.5
CDS-3UTR CAA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAATGGAGAAGTGCGAAGTaGACAGGAAGTACATCAATA +
Preference number: 5 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKWRSAK*TGSTSI
Trigger: TATTGATGTACTTCCTGTCAACTTCGCACTTCTCCA...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TCAGGTATGGACAAGCTGAATGTATTTCCTGGAGTCTCCCAAATTATCTTGATGCCTCAACGCATTTCTTaGCAACCTCATAGTGTTTAT +
Preference number: 5 (lower is better)
Translates to: SGMDKLNVFPGVSQIILMPQRIS*QPHSVY
Trigger: ATAAACACTATGAGGTTGCAAAGAAATGCGTTGAGG...CATCAAGATAATTTGGGAGACTCCAGGAAATACATTCAGCTTGTCCATACCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CAA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATTGGGTCACCTGTTCGTaGCAAAACAATTGTCAATTC +
Preference number: 5 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHWVTCS*QNNCQF
Trigger: GAATTGACAATTGTTTTGCAACGAACAGGTGACCCA...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GATATCAGTAGGTACCATTCTGAAGAAGGATCAGATGAACTGCCCTTTCTTCGACACTGTTTTCTGCATTaGAAATTCCGTTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: DISRYHSEEGSDELPFLRHCFLH*KFRLYL
Trigger: CAAGTACAAACGGAATTTCAAATGCAGAAAACAGTG...TCGAAGAAAGGGCAGTTCATCTGATCCTTCTTCAGAATGGTACCTACTGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGAGGGTATCTGAGTCCTaGGATCTTGAAAATACTGAA +
Preference number: 5 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQRVSES*DLENTE
Trigger: TTCAGTATTTTCAAGATCCAAGGACTCAGATACCCT...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATTTAGCAATGACATCTTaGGGCTCTGAATCAATGGCA +
Preference number: 5 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHLAMTS*GSESMA
Trigger: TGCCATTGATTCAGAGCCCAAAGATGTCATTGCTAA...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CATTTGAAATTCCTACAAATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATCCAAGATCTCTTCAATaGGTTCACTTTGTCCATCAG +
Preference number: 5 (lower is better)
Translates to: HLKFLQIAVHPVIFSRQHPRSLQ*VHFVHQ
Trigger: CTGATGGACAAAGTGAACCAATTGAAGAGATCTTGG...ATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATTTGTAGGAATTTCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGAAGGCTACTGTGCTGTaGTTATGCTACAAACAAACA +
Preference number: 5 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQKATVL*LCYKQT
Trigger: TGTTTGTTTGTAGCATAACAACAGCACAGTAGCCTT...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp ATATATTCACCCTCAGAACGTGCTGAAGATGTTTTGTGTAGTTCTGTTGCACAGGTACATCACATCTTGTaGGTAAAAAGGCCAAATGAC +
Preference number: 5 (lower is better)
Translates to: IYSPSERAEDVLCSSVAQVHHIL*VKRPND
Trigger: GTCATTTGGCCTTTTTACCAACAAGATGTGATGTAC...CTGTGCAACAGAACTACACAAAACATCTTCAGCACGTTCTGAGGGTGAATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS TCA 90 bp ACTTTGGAAACTACTGATCCAAACAATATTGTAGAGACTCAAGTGTaGAGAAAACAGCTTTGCCACCTGAAAGAGGAAATCTCTGACAAG +
Preference number: 5 (lower is better)
Translates to: TLETTDPNNIVETQV*RKQLCHLKEEISDK
Trigger: CTTGTCAGAGATTTCCTCTTTCAGGTGGCAAAGCTGTTTTCTTCACACTTGAGTCTCTACAATATTGTTTGGATCAGTAGTTTCCAAAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373670.5
CDS-3UTR CAA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAATTATTCAAGCAGGTCTaGCAAACAGTGTGTGAACAA +
Preference number: 5 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKLFKQV*QTVCEQ
Trigger: TTGTTCACACACTGTTTGCAAGACCTGCTTGAATAA...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAACAACATGACCAATACTaGTTTTTGATGCCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKQHDQY*FLMPEE
Trigger: TTCCTCAGGCATCAAAAACAAGTATTGGTCATGTTG...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp AGAGTAGAGCTAGAGGATAAAATCAGGATGAGATTCTGTGATGTACTGAGGAACATAGAACTAGTTCGATaGGGTACAAACAGCATCTTT +
Preference number: 5 (lower is better)
Translates to: RVELEDKIRMRFCDVLRNIELVR*GTNSIF
Trigger: AAAGATGCTGTTTGTACCCAATCGAACTAGTTCTAT...GTTCCTCAGTACATCACAGAATCTCATCCTGATTTTATCCTCTAGCTCTACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS-3UTR CAA 90 bp AATTGCCGTGCATCCTGTAATTTTCTCAAGGCAGCATATAAAATTGGGATGTGCGTGGTTGTGACAGTGTaGTTTACACCAACTTTATTT +
Preference number: 5 (lower is better)
Translates to: NCRASCNFLKAAYKIGMCVVVTV*FTPTLF
Trigger: AAATAAAGTTGGTGTAAACAACACTGTCACAACCAC...GCACATCCCAATTTTATATGCTGCCTTGAGAAAATTACAGGATGCACGGCAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAAGATCTTCTTCAAATTTaGTACCACTCACACTCTCTG +
Preference number: 5 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKDLLQI*YHSHSL
Trigger: CAGAGAGTGTGAGTGGTACAAAATTTGAAGAAGATC...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAACCAAGATCTCTTCAATaGGTTCACTTTGTCCATCAG +
Preference number: 5 (lower is better)
Translates to: YFQMPSQNHFSHILARQKPRSLQ*VHFVHQ
Trigger: CTGATGGACAAAGTGAACCAATTGAAGAGATCTTGG...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTCTAATGCAAGAGGGCTaGAAGTATCAAAGAGTCCAC +
Preference number: 5 (lower is better)
Translates to: HREWMQHRIISTQKQFLCLMQEG*KYQRVH
Trigger: GTGGACTCTTTGATACTTCAAGCCCTCTTGCATTAG...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAAAAGGCTACTGTGCTGTaGTTATGCTACAAACAAACA +
Preference number: 5 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKKATVL*LCYKQT
Trigger: TGTTTGTTTGTAGCATAACAACAGCACAGTAGCCTT...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTAAGAACAGGGAGTTATaGTTTTATGGGATCACCTGC +
Preference number: 5 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSKNREL*FYGITC
Trigger: GCAGGTGATCCCATAAAACAATAACTCCCTGTTCTT...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTTCTTTTGTGTTCTGCTaGCAGAAGGGGTCCTTATGT +
Preference number: 5 (lower is better)
Translates to: HREWMQHRIISTQKQFLCSFVFC*QKGSLC
Trigger: ACATAAGGACCCCTTCTGCAAGCAGAACACAAAAGA...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS TCA 90 bp GTTTATTCAAGCAGGTCTTGCAAACAGTGTGTGAACAACCTAAACTaGTGGGTTTGTGCACATTCTCATCAAATTCATTATAGCAGATTG +
Preference number: 5 (lower is better)
Translates to: VYSSRSCKQCVNNLN*WVCAHSHQIHYSRL
Trigger: CAATCTGCTATAATGAATTTGATGAGAATGTGCACAAACCCATCAGTTTAGGTTGTTCACACACTGTTTGCAAGACCTGCTTGAATAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000471874.2
ENST00000498479.5
CDS-3UTR CAA 90 bp ACAGCATTTGAATTAGCAATGACATCTTTGGGCTCTGAATCAATGGCATTTATATGGAGAAGTGCGAAGTaGACAGGAAGTACATCAATA +
Preference number: 5 (lower is better)
Translates to: TAFELAMTSLGSESMAFIWRSAK*TGSTSI
Trigger: TATTGATGTACTTCCTGTCAACTTCGCACTTCTCCA...TATAAATGCCATTGATTCAGAGCCCAAAGATGTCATTGCTAATTCAAATGCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS-3UTR CAA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAGACCAATACTTGTTTTaGATGCCTGAGGAAATCTTG +
Preference number: 5 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPDQYLF*MPEEIL
Trigger: CAAGATTTCCTCAGGCATCAAAAACAAGTATTGGTC...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAACAACATGACCAATACTaGTTTTTGATGCCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: YFQMPSQNHFSHILARQKQHDQY*FLMPEE
Trigger: TTCCTCAGGCATCAAAAACAAGTATTGGTCATGTTG...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGATCTTCTTCAAATTTaGTACCACTCACACTCTCTG +
Preference number: 5 (lower is better)
Translates to: YFQMPSQNHFSHILARQKDLLQI*YHSHSL
Trigger: CAGAGAGTGTGAGTGGTACAAAATTTGAAGAAGATC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCAAAGCACCTGATTCTTTaGCCAAGTCATCAGATTCAA +
Preference number: 5 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPKHLIL*PSHQIQ
Trigger: TTGAATCTGATGACTTGGCAAAAGAATCAGGTGCTT...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TCATGTATGACACTGGTTTATCACATGGCATTGAAAATAAGACGTGGCAGCAAACTGATGCATGACTTGTaGAACACATTGTATACTTTC +
Preference number: 5 (lower is better)
Translates to: SCMTLVYHMALKIRRGSKLMHDL*NTLYTF
Trigger: GAAAGTATACAATGTGTTCAACAAGTCATGCATCAG...TTTGCTGCCACGTCTTATTTTCAATGCCATGTGATAAACCAGTGTCATACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCACTAATTCTCGACAGGTaGATGGAATATGTGCAAATG +
Preference number: 5 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPLILDR*MEYVQM
Trigger: CATTTGCACATATTCCATCAACCTGTCGAGAATTAG...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS CCA 90 bp AAGTGTTTCCCTTGGATAACCAGTACCCCAAAACATAATAAAGTATaGCCAGGAGTTAATGAACTTTGGAAACTACTGATCCAAACAATA +
Preference number: 5 (lower is better)
Translates to: KCFPWITSTPKHNKV*PGVNELWKLLIQTI
Trigger: TATTGTTTGGATCAGTAGTTTCCAAAGTTCATTAACTCCTGGCCATACTTTATTATGTTTTGGGGTACTGGTTATCCAAGGGAAACACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373670.5
CDS-3UTR CAA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTCCTAAACTGATGGGTTaGTGCACATTCTCATCAAAT +
Preference number: 5 (lower is better)
Translates to: HREWMQHRIISTQKQFLCPKLMG*CTFSSN
Trigger: ATTTGATGAGAATGTGCACAAACCCATCAGTTTAGG...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTGTGGTTGTGACAGTGTaGTTTACACCAACTTTATTT +
Preference number: 5 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSVVVTV*FTPTLF
Trigger: AAATAAAGTTGGTGTAAACAACACTGTCACAACCAC...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAACACTGTTTTCTGCATTaGAAATTCCGTTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: YFQMPSQNHFSHILARQKHCFLH*KFRLYL
Trigger: CAAGTACAAACGGAATTTCAAATGCAGAAAACAGTG...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp ACACCTGGTGAAAGATCAGCTTGGCTTAAAATATTCCAGTACAATTTTCAGAGTCACTGTTTTCTGCATTaGAAATTCCGTTTGTACTTG +
Preference number: 5 (lower is better)
Translates to: TPGERSAWLKIFQYNFQSHCFLH*KFRLYL
Trigger: CAAGTACAAACGGAATTTCAAATGCAGAAAACAGTG...ACTCTGAAAATTGTACTGGAATATTTTAAGCCAAGCTGATCTTTCACCAGGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGACTTGTTGAACACATaGTATACTTTCAGATGCCAA +
Preference number: 5 (lower is better)
Translates to: YFQMPSQNHFSHILARQKDLLNT*YTFRCQ
Trigger: TTGGCATCTGAAAGTATACAATGTGTTCAACAAGTC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000498479.5
CDS-3UTR CAA 90 bp TACTTTCAGATGCCAAGTCAAAACCATTTCAGTCACATTTTAGCAAGGCAGAAAGACATACCAATAAGGTaGGCAGGTATATACATATAC +
Preference number: 5 (lower is better)
Translates to: YFQMPSQNHFSHILARQKDIPIR*AGIYIY
Trigger: GTATATGTATATACCTGCCAACCTTATTGGTATGTC...TTTCTGCCTTGCTAAAATGTGACTGAAATGGTTTTGACTTGGCATCTGAAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp GCCAATTTTAGACTAGAAGGGAATAACTGCTCTTGGAGTAAAAATAAGACTCCACCTTTGATTCCAAATTaGTACATCACATCTTGTTGG +
Preference number: 5 (lower is better)
Translates to: ANFRLEGNNCSWSKNKTPPLIPN*YITSCW
Trigger: CCAACAAGATGTGATGTACAAATTTGGAATCAAAGG...TGGAGTCTTATTTTTACTCCAAGAGCAGTTATTCCCTTCTAGTCTAAAATTGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS-3UTR CAA 90 bp CATAGAGAATGGATGCAACACAGAATAATCTCAACACAGAAACAATTCCTATGTCCTTTGATTCCAAATTaGTACATCACATCTTGTTGG +
Preference number: 5 (lower is better)
Translates to: HREWMQHRIISTQKQFLCPLIPN*YITSCW
Trigger: CCAACAAGATGTGATGTACAAATTTGGAATCAAAGG...ACATAGGAATTGTTTCTGTGTTGAGATTATTCTGTGTTGCATCCATTCTCTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000373670.5
CDS CCA 72 bp CTCAAACTCCATCGGGAGCTACAGGGACAGCCCCGTTaGCGGCGGCGAAGGCCGCGACGGGGCCTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: LKLHRELQGQPR*RRRRPRRGLLL
Trigger: GAGGAGGAGGCCCCGTCGCGGCCTTCGCCGCCGCCAACGGGGCTGTCCCTGTAGCTCCCGATGGAGTTTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000423239.6
CDS CAA 72 bp CCTCAAACTCCATCGGGAGCTACAGGGACAGCCCCGTaGGCGGCGGCGAAGGCCGCGACGGGGCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: PQTPSGATGTAP*AAAKAATGPPP
Trigger: AGGAGGAGGCCCCGTCGCGGCCTTCGCCGCCGCCAACGGGGCTGTCCCTGTAGCTCCCGATGGAGTTTGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357244.7
ENST00000423239.6
CDS CCA 72 bp ACCAGTTTCCTTTGCATTGGACGGCTCAGTGCACTCTaGTTCAAGCTAGCTACACCTGAGGGGGCCCGGGCG +
Preference number: 6 (lower is better)
Translates to: TSFLCIGRLSAL*FKLATPEGARA
Trigger: CGCCCGGGCCCCCTCAGGTGTAGCTAGCTTGAACCAGAGTGCACTGAGCCGTCCAATGCAAAGGAAACTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478216.1
CDS GCA 72 bp GCAGATTGGACAGGACAGAAATTCTGTCCATTGAGCTaGCTGCACAGGCATTGTGGAAGCTGGATGCTCGGG +
Preference number: 6 (lower is better)
Translates to: ADWTGQKFCPLS*LHRHCGSWMLG
Trigger: CCCGAGCATCCAGCTTCCACAATGCCTGTGCAGGCAGCTCAATGGACAGAATTTCTGTCCTGTCCAATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000471874.2
ENST00000498479.5
CDS CAA 90 bp ACGAGCTGCTCGCATGGCTCTTACACGACCTTCTTCCTCCACCAGTaGACAGTTTACAAGTGTCACCAGTTTCCTTTGCATTGGACGGCT +
Preference number: 6 (lower is better)
Translates to: TSCSHGSYTTFFLHQ*TVYKCHQFPLHWTA
Trigger: AGCCGTCCAATGCAAAGGAAACTGGTGACACTTGTAAACTGTCAACTGGTGGAGGAAGAAGGTCGTGTAAGAGCCATGCGAGCAGCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000471874.2
ENST00000478216.1
ENST00000498479.5
CDS GCA 72 bp CAGTTCTGTTACAGTTCTTTCTCCAAGGGAACGAGCTaGTCGCATGGCTCTTACACGACCTTCTTCCTCCAC +
Preference number: 6 (lower is better)
Translates to: QFCYSSFSKGTS*SHGSYTTFFLH
Trigger: GTGGAGGAAGAAGGTCGTGTAAGAGCCATGCGAGCAGCTCGTTCCCTTGGAGAAAGAACTGTAACAGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000471874.2
ENST00000478216.1
ENST00000498479.5
CDS CCA 72 bp GAAATTCTGTCCATTGAGCTGCCTGCACAGGCATTGTaGAAGCTGGATGCTCGGGTTAGCAGTCTAGCAGAT +
Preference number: 6 (lower is better)
Translates to: EILSIELPAQAL*KLDARVSSLAD
Trigger: ATCTGCTAGACTGCTAACCCGAGCATCCAGCTTCCACAATGCCTGTGCAGGCAGCTCAATGGACAGAATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000498479.5
CDS CCA 72 bp TTACAGTTCTTTCTCCAAGGGAACGAGCTGCTCGCATaGCTCTTACACGACCTTCTTCCTCCACCAGTTGAC +
Preference number: 6 (lower is better)
Translates to: LQFFLQGNELLA*LLHDLLPPPVD
Trigger: GTCAACTGGTGGAGGAAGAAGGTCGTGTAAGAGCCATGCGAGCAGCTCGTTCCCTTGGAGAAAGAACTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000471874.2
ENST00000478216.1
ENST00000498479.5
CDS CAA 72 bp ACAGAAATTCTGTCCATTGAGCTGCCTGCACAGGCATaGTGGAAGCTGGATGCTCGGGTTAGCAGTCTAGCA +
Preference number: 6 (lower is better)
Translates to: TEILSIELPAQA*WKLDARVSSLA
Trigger: TGCTAGACTGCTAACCCGAGCATCCAGCTTCCACAATGCCTGTGCAGGCAGCTCAATGGACAGAATTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000498479.5
CDS GCA 72 bp AAGTGTCACCAGTTTCCTTTGCATTGGACGGCTCAGTaGACTCTGGTTCAAGCTAGCTACACCTTTACCTCC +
Preference number: 6 (lower is better)
Translates to: KCHQFPLHWTAQ*TLVQASYTFTS
Trigger: GGAGGTAAAGGTGTAGCTAGCTTGAACCAGAGTGCACTGAGCCGTCCAATGCAAAGGAAACTGGTGACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000471874.2
ENST00000498479.5
CDS CAA 90 bp TTGGACAGGACAGAAATTCTGTCCATTGAGCTGCCTGCACAGGCATaGTGGAAGCTGGATGCTCGGGTTAGCAGTCTAGCAGATCATTAT +
Preference number: 6 (lower is better)
Translates to: LDRTEILSIELPAQA*WKLDARVSSLADHY
Trigger: ATAATGATCTGCTAGACTGCTAACCCGAGCATCCAGCTTCCACAATGCCTGTGCAGGCAGCTCAATGGACAGAATTTCTGTCCTGTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000498479.5
CDS CAA 90 bp TTCTTCCTCCACCAGTTGACAGTTTACAAGTGTCACCAGTTTCCTTaGCATTGGACGGCTCAGTGCACTCTGGTTCAAGCTAGCTACACC +
Preference number: 6 (lower is better)
Translates to: FFLHQLTVYKCHQFP*HWTAQCTLVQASYT
Trigger: GGTGTAGCTAGCTTGAACCAGAGTGCACTGAGCCGTCCAATGCAAAGGAAACTGGTGACACTTGTAAACTGTCAACTGGTGGAGGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000471874.2
ENST00000478216.1
ENST00000498479.5
CDS TCA 72 bp GTGCCCAAGCTAGCCACTGAGGAAAGGAGACAACAATaGAGATATAGTCCACGGGGGTTACACTTTTCAAGC +
Preference number: 6 (lower is better)
Translates to: VPKLATEERRQQ*RYSPRGLHFSS
Trigger: GCTTGAAAAGTGTAACCCCCGTGGACTATATCTTCATTGTTGTCTCCTTTCCTCAGTGGCTAGCTTGGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335387.9
CDS CCA 72 bp ACCAGTTTCCTTTGCATTGGACGGCTCAGTGCACTCTaGTTCAAGCTAGCTACACCTTTACCTCCACTTAGT +
Preference number: 6 (lower is better)
Translates to: TSFLCIGRLSAL*FKLATPLPPLS
Trigger: ACTAAGTGGAGGTAAAGGTGTAGCTAGCTTGAACCAGAGTGCACTGAGCCGTCCAATGCAAAGGAAACTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000471874.2
ENST00000498479.5
CDS CCA 72 bp TTCCTGAGAATGGGCAAATGTACAATTTGTTCCTCGTaGACAACCCCCTTGCTGTCGCAAATCTCGGCACAT +
Preference number: 6 (lower is better)
Translates to: FLRMGKCTICSS*TTPLLSQISAH
Trigger: ATGTGCCGAGATTTGCGACAGCAAGGGGGTTGTCCACGAGGAACAAATTGTACATTTGCCCATTCTCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000498479.5
CDS CAA 72 bp CACCAGTTGACAGTTTACAAGTGTCACCAGTTTCCTTaGCATTGGACGGCTCAGTGCACTCTGGTTCAAGCT +
Preference number: 6 (lower is better)
Translates to: HQLTVYKCHQFP*HWTAQCTLVQA
Trigger: AGCTTGAACCAGAGTGCACTGAGCCGTCCAATGCAAAGGAAACTGGTGACACTTGTAAACTGTCAACTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000471874.2
ENST00000478216.1
ENST00000498479.5
CDS CAA 72 bp GGCAAATGTACAATTTGTTCCTCGTGGACAACCCCCTaGCTGTCGCAAATCTCGGCACATGCTAGTCTTGTA +
Preference number: 6 (lower is better)
Translates to: GKCTICSSWTTP*LSQISAHASLV
Trigger: TACAAGACTAGCATGTGCCGAGATTTGCGACAGCAAGGGGGTTGTCCACGAGGAACAAATTGTACATTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000498479.5
CDS CAA 72 bp ATTATAGCAGATTGGACAGGACAGAAATTCTGTCCATaGAGCTGCCTGCACAGGCATTGTGGAAGCTGGATG +
Preference number: 6 (lower is better)
Translates to: IIADWTGQKFCP*SCLHRHCGSWM
Trigger: CATCCAGCTTCCACAATGCCTGTGCAGGCAGCTCAATGGACAGAATTTCTGTCCTGTCCAATCTGCTATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000471874.2
ENST00000498479.5
CDS CAA 90 bp ATCAAATTCATTATAGCAGATTGGACAGGACAGAAATTCTGTCCATaGAGCTGCCTGCACAGGCATTGTGGAAGCTGGATGCTCGGGTTA +
Preference number: 6 (lower is better)
Translates to: IKFIIADWTGQKFCP*SCLHRHCGSWMLGL
Trigger: TAACCCGAGCATCCAGCTTCCACAATGCCTGTGCAGGCAGCTCAATGGACAGAATTTCTGTCCTGTCCAATCTGCTATAATGAATTTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000471874.2
ENST00000498479.5
CDS GCA 72 bp CTCAGTCTATTTAAGTTAGCTGGGTCACCTGTTCGTTaGAAAACAATTGTCAATTCCTGGACACTCTTTGCA +
Preference number: 6 (lower is better)
Translates to: LSLFKLAGSPVR*KTIVNSWTLFA
Trigger: TGCAAAGAGTGTCCAGGAATTGACAATTGTTTTGCAACGAACAGGTGACCCAGCTAACTTAAATAGACTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000498479.5
CDS CAA 72 bp AGGCTGAGGGGTCTCATGGCCTTTTCTACTATAATTTaGTATGAAGTCCACAAGGCCATGAACTACTGTTTT +
Preference number: 6 (lower is better)
Translates to: RLRGLMAFSTII*YEVHKAMNYCF
Trigger: AAAACAGTAGTTCATGGCCTTGTGGACTTCATACAAAATTATAGTAGAAAAGGCCATGAGACCCCTCAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000498479.5
CDS CAA 90 bp GTGAGATTAGCTGGGAAACACTGTTTTCTGCATTTGAAATTCCGTTaGTACTTGGAACAATTTTCCCTGTTGTTTCAGTACTTCAGTGGC +
Preference number: 6 (lower is better)
Translates to: VRLAGKHCFLHLKFR*YLEQFSLLFQYFSG
Trigger: GCCACTGAAGTACTGAAACAACAGGGAAAATTGTTCCAAGTACAAACGGAATTTCAAATGCAGAAAACAGTGTTTCCCAGCTAATCTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS CCA 72 bp TTTGTGCACATTCTCATCAAATTCATTATAGCAGATTaGACAGGACAGAAATTCTGTCCATTGAGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: FVHILIKFIIAD*TGQKFCPLSCL
Trigger: CAGGCAGCTCAATGGACAGAATTTCTGTCCTGTCCAATCTGCTATAATGAATTTGATGAGAATGTGCACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000471874.2
ENST00000498479.5
CDS CCA 72 bp GCTCTTAAGGTACTGTCAGTACTACGTGAGATTAGCTaGGAAACACTGTTTTCTGCATTTGAAATTCCGTTT +
Preference number: 6 (lower is better)
Translates to: ALKVLSVLREIS*ETLFSAFEIPF
Trigger: AAACGGAATTTCAAATGCAGAAAACAGTGTTTCCCAGCTAATCTCACGTAGTACTGACAGTACCTTAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000498479.5
CDS CAA 72 bp GTTTGTGCACATTCTCATCAAATTCATTATAGCAGATaGGACAGGACAGAAATTCTGTCCATTGAGCTGCCT +
Preference number: 6 (lower is better)
Translates to: VCAHSHQIHYSR*DRTEILSIELP
Trigger: AGGCAGCTCAATGGACAGAATTTCTGTCCTGTCCAATCTGCTATAATGAATTTGATGAGAATGTGCACAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000471874.2
ENST00000498479.5
CDS CAA 72 bp AAGCTCGATACAGTAGTTGCACAACATGACCAATACTaGTTTTTGATGCCTGAGGAAATCTTGGTTCTAGTC +
Preference number: 6 (lower is better)
Translates to: KLDTVVAQHDQY*FLMPEEILVLV
Trigger: GACTAGAACCAAGATTTCCTCAGGCATCAAAAACAAGTATTGGTCATGTTGTGCAACTACTGTATCGAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000498479.5
CDS CAA 90 bp TGTCAGTACTACGTGAGATTAGCTGGGAAACACTGTTTTCTGCATTaGAAATTCCGTTTGTACTTGGAACAATTTTCCCTGTTGTTTCAG +
Preference number: 6 (lower is better)
Translates to: CQYYVRLAGKHCFLH*KFRLYLEQFSLLFQ
Trigger: CTGAAACAACAGGGAAAATTGTTCCAAGTACAAACGGAATTTCAAATGCAGAAAACAGTGTTTCCCAGCTAATCTCACGTAGTACTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000498479.5
CDS TCA 72 bp AGCAGGTCTTGCAAACAGTGTGTGAACAACCTAAACTaGTGGGTTTGTGCACATTCTCATCAAATTCATTAT +
Preference number: 6 (lower is better)
Translates to: SRSCKQCVNNLN*WVCAHSHQIHY
Trigger: ATAATGAATTTGATGAGAATGTGCACAAACCCATCAGTTTAGGTTGTTCACACACTGTTTGCAAGACCTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335387.9
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000471874.2
ENST00000498479.5
CDS TCA 72 bp ACTACTGATCCAAACAATATTGTAGAGACTCAAGTGTaGAGAAAACAGCTTTGCCACCTGAAAGAGGAAATC +
Preference number: 6 (lower is better)
Translates to: TTDPNNIVETQV*RKQLCHLKEEI
Trigger: GATTTCCTCTTTCAGGTGGCAAAGCTGTTTTCTTCACACTTGAGTCTCTACAATATTGTTTGGATCAGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373670.5
CDS CCA 72 bp CCTTGGATAACCAGTACCCCAAAACATAATAAAGTATaGCCAGGAGTTAATGAACTTTGGAAACTACTGATC +
Preference number: 6 (lower is better)
Translates to: PWITSTPKHNKV*PGVNELWKLLI
Trigger: GATCAGTAGTTTCCAAAGTTCATTAACTCCTGGCCATACTTTATTATGTTTTGGGGTACTGGTTATCCAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373670.5
CDS CAA 72 bp TACGTGAGATTAGCTGGGAAACACTGTTTTCTGCATTaGAAATTCCGTTTGTACTTGGAACAATTTTCCCTG +
Preference number: 6 (lower is better)
Translates to: YVRLAGKHCFLH*KFRLYLEQFSL
Trigger: CAGGGAAAATTGTTCCAAGTACAAACGGAATTTCAAATGCAGAAAACAGTGTTTCCCAGCTAATCTCACGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357244.7
ENST00000373670.5
ENST00000423239.6
ENST00000498479.5
CDS CAA 90 bp TTAGCTGGGAAACACTGTTTTCTGCATTTGAAATTCCGTTTGTACTaGGAACAATTTTCCCTGTTGTTTCAGTACTTCAGTGGCATTGAT +
Preference number: 6 (lower is better)
Translates to: LAGKHCFLHLKFRLY*EQFSLLFQYFSGID
Trigger: ATCAATGCCACTGAAGTACTGAAACAACAGGGAAAATTGTTCCAAGTACAAACGGAATTTCAAATGCAGAAAACAGTGTTTCCCAGCTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498479.5
CDS TCA 72 bp AAGTATGGCCAGGAGTTAATGAACTTTGGAAACTACTaGTCCAAACAATATTGTAGAGACTCAAGTGTGAAG +
Preference number: 6 (lower is better)
Translates to: KYGQELMNFGNY*SKQYCRDSSVK
Trigger: CTTCACACTTGAGTCTCTACAATATTGTTTGGATCAGTAGTTTCCAAAGTTCATTAACTCCTGGCCATACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373670.5
CDS CAA 72 bp TTGAAATTCCGTTTGTACTTGGAACAATTTTCCCTGTaGTTTCAGTACTTCAGTGGCATTGATCTTTTTGTT +
Preference number: 6 (lower is better)
Translates to: LKFRLYLEQFSL*FQYFSGIDLFV
Trigger: AACAAAAAGATCAATGCCACTGAAGTACTGAAACAACAGGGAAAATTGTTCCAAGTACAAACGGAATTTCAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498479.5