Pregenerated sensors for RBX1 (Homo sapiens)
Ensembl gene IDs: ENSG00000100387Ensembl transcript IDs: ENST00000216225.9, ENST00000467617.1, ENST00000476110.1
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTACCCAAGCTGTGGAACCAGGACTCAGAACTGGGTTTGATGACTaGATCCCACATTCTTCCCTCTTTCAGCTGCCCACTGCTGTCACA | + |
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Preference number: 1 (lower is better) Translates to: STQAVEPGLRTGFDD*IPHSSLFQLPTAVT Trigger: TGTGACAGCAGTGGGCAGCTGAAAGAGGGAAGAATGTGGGATTCAGTCATCAAACCCAGTTCTGAGTCCTGGTTCCACAGCTTGGGTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| 3UTR CCA 90 bp | AGTAGAGAGACAACTTGGCCAAGATTGCCATCAGTACCCAAGCTGTaGAACCAGGACTCAGAACTGGGTTTGATGACTGAATCCCACATT | + |
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Preference number: 1 (lower is better) Translates to: SRETTWPRLPSVPKL*NQDSELGLMTESHI Trigger: AATGTGGGATTCAGTCATCAAACCCAGTTCTGAGTCCTGGTTCCACAGCTTGGGTACTGATGGCAATCTTGGCCAAGTTGTCTCTCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGACAACTTGGCCAAGATTGCCATCAGTACCCAAGCTGTGGAACCAGGACTCAGGAGAAAGAAGGGCTaGCTGCTGTTTTCGGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: RDNLAKIAISTQAVEPGLRRKKG*LLFSGA Trigger: GGCTCCCGAAAACAGCAGTCAGCCCTTCTTTCTCCT...GAGTCCTGGTTCCACAGCTTGGGTACTGATGGCAATCTTGGCCAAGTTGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| 3UTR-3UTR GCA 90 bp | GAGAGACAACTTGGCCAAGATTGCCATCAGTACCCAAGCTGTGGAACCAGGACTCTCAGAGGACAACCCTaGTCTGGCCCCGATGAACAA | + |
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Preference number: 2 (lower is better) Translates to: ERQLGQDCHQYPSCGTRTLRGQP*SGPDEQ Trigger: TTGTTCATCGGGGCCAGAGCAGGGTTGTCCTCTGAG...AGTCCTGGTTCCACAGCTTGGGTACTGATGGCAATCTTGGCCAAGTTGTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| 3UTR-3UTR TCA 90 bp | GAATCCCACATTCTTCCCTCTTTCAGCTGCCCACTGCTGTCACACAGGAGAAAGATCCACACTCTGCCTTaGGCTGTTGGATTCCTCGTC | + |
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Preference number: 2 (lower is better) Translates to: ESHILPSFSCPLLSHRRKIHTLP*AVGFLV Trigger: GACGAGGAATCCAACAGCTCAAGGCAGAGTGTGGAT...CTTTCTCCTGTGTGACAGCAGTGGGCAGCTGAAAGAGGGAAGAATGTGGGATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| 3UTR-3UTR GCA 90 bp | TCCATCTACTGCCTCATGATCTCAGGTGGAACAGTTCCAAAACCATCCCCAAGCCTTCCCTCTTTCAGCTaGCCACTGCTGTCACACAGG | + |
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Preference number: 2 (lower is better) Translates to: SIYCLMISGGTVPKPSPSLPSFS*PLLSHR Trigger: CCTGTGTGACAGCAGTGGGCAGCTGAAAGAGGGAAG...GCTTGGGGATGGTTTTGGAACTGTTCCACCTGAGATCATGAGGCAGTAGATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| 3UTR CAA 90 bp | TTGCCATCAGTACCCAAGCTGTGGAACCAGGACTCAGAACTGGGTTaGATGACTGAATCCCACATTCTTCCCTCTTTCAGCTGCCCACTG | + |
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Preference number: 2 (lower is better) Translates to: LPSVPKLWNQDSELG*MTESHILPSFSCPL Trigger: CAGTGGGCAGCTGAAAGAGGGAAGAATGTGGGATTCAGTCATCAAACCCAGTTCTGAGTCCTGGTTCCACAGCTTGGGTACTGATGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| 3UTR-3UTR TCA 90 bp | TCCATCTACTGCCTCATGATCTCAGGTGGAACAGTTCCAAAACCATCCCCAAGCTTCCTCGTCACTAAGTaGTGCGCTCAGAGGACAACC | + |
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Preference number: 2 (lower is better) Translates to: SIYCLMISGGTVPKPSPSFLVTK*CAQRTT Trigger: GGTTGTCCTCTGAGCGCATCACTTAGTGACGAGGAA...GCTTGGGGATGGTTTTGGAACTGTTCCACCTGAGATCATGAGGCAGTAGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| 3UTR-3UTR TCA 90 bp | AGGAAAGTTCAGAGTAGAGAGACAACTTGGCCAAGATTGCCATCAGTACCCAAGGTTTTCGGGAGCCGGTaGTCCACACTCTGCCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: RKVQSRETTWPRLPSVPKVFGSR*STLCLE Trigger: CTCAAGGCAGAGTGTGGATCACCGGCTCCCGAAAAC...CTTGGGTACTGATGGCAATCTTGGCCAAGTTGTCTCTCTACTCTGAACTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| 3UTR-3UTR TCA 90 bp | TCCATCTACTGCCTCATGATCTCAGGTGGAACAGTTCCAAAACCATCCCCAAGCCTCTCTGTGCCCACATaGTGCCACTTAGTCCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: SIYCLMISGGTVPKPSPSLSVPT*CHLVLR Trigger: TCTGAGGACTAAGTGGCATCATGTGGGCACAGAGAG...GCTTGGGGATGGTTTTGGAACTGTTCCACCTGAGATCATGAGGCAGTAGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| 3UTR-3UTR GCA 90 bp | GAGAGACAACTTGGCCAAGATTGCCATCAGTACCCAAGCTGTGGAACCAGGACTCTTTCAGCTGCCCACTaGTGTCACACAGGAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: ERQLGQDCHQYPSCGTRTLSAAH*CHTGER Trigger: TCTTTCTCCTGTGTGACAGCAGTGGGCAGCTGAAAG...AGTCCTGGTTCCACAGCTTGGGTACTGATGGCAATCTTGGCCAAGTTGTCTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| 3UTR-3UTR TCA 90 bp | AGGAAAGTTCAGAGTAGAGAGACAACTTGGCCAAGATTGCCATCAGTACCCAAGACTGGGTTTGATGACTaGATCCCACATTCTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: RKVQSRETTWPRLPSVPKTGFDD*IPHSSL Trigger: GAGGGAAGAATGTGGGATTCAGTCATCAAACCCAGT...CTTGGGTACTGATGGCAATCTTGGCCAAGTTGTCTCTCTACTCTGAACTTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| 3UTR TCA 72 bp | GCTGTGGAACCAGGACTCAGAACTGGGTTTGATGACTaGATCCCACATTCTTCCCTCTTTCAGCTGCCCACT | + |
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Preference number: 3 (lower is better) Translates to: AVEPGLRTGFDD*IPHSSLFQLPT Trigger: AGTGGGCAGCTGAAAGAGGGAAGAATGTGGGATTCAGTCATCAAACCCAGTTCTGAGTCCTGGTTCCACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| 3UTR-3UTR CAA 90 bp | TCCATCTACTGCCTCATGATCTCAGGTGGAACAGTTCCAAAACCATCCCCAAGCGCTGAGTTTTCAGCCTaGGAAGGGGAGACTCTTCAT | + |
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Preference number: 3 (lower is better) Translates to: SIYCLMISGGTVPKPSPSAEFSA*EGETLH Trigger: ATGAAGAGTCTCCCCTTCCAAGGCTGAAAACTCAGC...GCTTGGGGATGGTTTTGGAACTGTTCCACCTGAGATCATGAGGCAGTAGATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| 3UTR-3UTR CAA 90 bp | AGGAAAGTTCAGAGTAGAGAGACAACTTGGCCAAGATTGCCATCAGTACCCAAGGATCCACACTCTGCCTaGAGCTGTTGGATTCCTCGT | + |
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Preference number: 3 (lower is better) Translates to: RKVQSRETTWPRLPSVPKDPHSA*SCWIPR Trigger: ACGAGGAATCCAACAGCTCAAGGCAGAGTGTGGATC...CTTGGGTACTGATGGCAATCTTGGCCAAGTTGTCTCTCTACTCTGAACTTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| 3UTR CCA 72 bp | ACAACTTGGCCAAGATTGCCATCAGTACCCAAGCTGTaGAACCAGGACTCAGAACTGGGTTTGATGACTGAA | + |
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Preference number: 3 (lower is better) Translates to: TTWPRLPSVPKL*NQDSELGLMTE Trigger: TTCAGTCATCAAACCCAGTTCTGAGTCCTGGTTCCACAGCTTGGGTACTGATGGCAATCTTGGCCAAGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| 3UTR-3UTR CAA 90 bp | AGGAAAGTTCAGAGTAGAGAGACAACTTGGCCAAGATTGCCATCAGTACCCAAGCTCTGCCTTGAGCTGTaGGATTCCTCGTCACTAAGT | + |
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Preference number: 3 (lower is better) Translates to: RKVQSRETTWPRLPSVPKLCLEL*DSSSLS Trigger: ACTTAGTGACGAGGAATCCAACAGCTCAAGGCAGAG...CTTGGGTACTGATGGCAATCTTGGCCAAGTTGTCTCTCTACTCTGAACTTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| 3UTR TCA 72 bp | GTTTTACATTTTACAAAGCTTCTCTCTGTGCCCACATaGTGCCACTTAGTCCTCAGAAGCCCACAGTACAGA | + |
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Preference number: 3 (lower is better) Translates to: VLHFTKLLSVPT*CHLVLRSPQYR Trigger: TCTGTACTGTGGGCTTCTGAGGACTAAGTGGCATCATGTGGGCACAGAGAGAAGCTTTGTAAAATGTAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR CCA 90 bp | GGAAAGTTCAGAGTAGAGAGACAACTTGGCCAAGATTGCCATCAGTACCCAAGCTGCCCGCGCCGCTGTTaGTGCCGCTCGGGGTATCCA | + |
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Preference number: 4 (lower is better) Translates to: GKFRVERQLGQDCHQYPSCPRRC*CRSGYP Trigger: TGGATACCCCGAGCGGCACCAACAGCGGCGCGGGCA...GCTTGGGTACTGATGGCAATCTTGGCCAAGTTGTCTCTCTACTCTGAACTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR GCA 90 bp | GACAACTTGGCCAAGATTGCCATCAGTACCCAAGCTGTGGAACCAGGACTCAGACTTCAAAGCGCTTCTTaGCCGCGCCGCTGTTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: DNLAKIAISTQAVEPGLRLQSAS*PRRCWC Trigger: GCACCAACAGCGGCGCGGGCAAGAAGCGCTTTGAAG...TCTGAGTCCTGGTTCCACAGCTTGGGTACTGATGGCAATCTTGGCCAAGTTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR TCA 90 bp | TGCGCGGTCCATCTACTGCCTCATGATCTCAGGTGGAACAGTTCCAAAACCATCGTTTTCGGGAGCCGGTaGTCCACACTCTGCCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: CAVHLLPHDLRWNSSKTIVFGSR*STLCLE Trigger: CTCAAGGCAGAGTGTGGATCACCGGCTCCCGAAAAC...GATGGTTTTGGAACTGTTCCACCTGAGATCATGAGGCAGTAGATGGACCGCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR TCA 90 bp | GGTTGCGCGGTCCATCTACTGCCTCATGATCTCAGGTGGAACAGTTCCAAAACCACACCTGTCGTGTTTTaGGCCAGCGAGAGATGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GCAVHLLPHDLRWNSSKTTPVVF*ASERCS Trigger: ACTGCATCTCTCGCTGGCTCAAAACACGACAGGTGT...GGTTTTGGAACTGTTCCACCTGAGATCATGAGGCAGTAGATGGACCGCGCAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR TCA 90 bp | GAATCCCACATTCTTCCCTCTTTCAGCTGCCCACTGCTGTCACACAGGAGAAAGAGGAGAAAGAAGGGCTaGCTGCTGTTTTCGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: ESHILPSFSCPLLSHRRKRRKKG*LLFSGA Trigger: GGCTCCCGAAAACAGCAGTCAGCCCTTCTTTCTCCT...CTTTCTCCTGTGTGACAGCAGTGGGCAGCTGAAAGAGGGAAGAATGTGGGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR GCA 90 bp | GACAACTTGGCCAAGATTGCCATCAGTACCCAAGCTGTGGAACCAGGACTCAGACTCAGAGGACAACCCTaGTCTGGCCCCGATGAACAA | + |
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Preference number: 4 (lower is better) Translates to: DNLAKIAISTQAVEPGLRLRGQP*SGPDEQ Trigger: TTGTTCATCGGGGCCAGAGCAGGGTTGTCCTCTGAG...TCTGAGTCCTGGTTCCACAGCTTGGGTACTGATGGCAATCTTGGCCAAGTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR TCA 90 bp | AGAGACAACTTGGCCAAGATTGCCATCAGTACCCAAGCTGTGGAACCAGGACTCGACAGTACACTCTTCTaGAGTAGCGGACGCCTGGTT | + |
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Preference number: 4 (lower is better) Translates to: RDNLAKIAISTQAVEPGLDSTLF*SSGRLV Trigger: AACCAGGCGTCCGCTACTTCAGAAGAGTGTACTGTC...GAGTCCTGGTTCCACAGCTTGGGTACTGATGGCAATCTTGGCCAAGTTGTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR TCA 90 bp | GAATCCCACATTCTTCCCTCTTTCAGCTGCCCACTGCTGTCACACAGGAGAAAGTTCCTCGTCACTAAGTaGTGCGCTCAGAGGACAACC | + |
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Preference number: 4 (lower is better) Translates to: ESHILPSFSCPLLSHRRKFLVTK*CAQRTT Trigger: GGTTGTCCTCTGAGCGCATCACTTAGTGACGAGGAA...CTTTCTCCTGTGTGACAGCAGTGGGCAGCTGAAAGAGGGAAGAATGTGGGATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR TCA 90 bp | CCCAAGCTGTGGAACCAGGACTCAGAACTGGGTTTGATGACTGAATCCCACATTATCCACACTCTGCCTTaGGCTGTTGGATTCCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: PKLWNQDSELGLMTESHIIHTLP*AVGFLV Trigger: GACGAGGAATCCAACAGCTCAAGGCAGAGTGTGGAT...AATGTGGGATTCAGTCATCAAACCCAGTTCTGAGTCCTGGTTCCACAGCTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR TCA 90 bp | ACAACTTGGCCAAGATTGCCATCAGTACCCAAGCTGTGGAACCAGGACTCAGAACTCTCTGTGCCCACATaGTGCCACTTAGTCCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: TTWPRLPSVPKLWNQDSELSVPT*CHLVLR Trigger: TCTGAGGACTAAGTGGCATCATGTGGGCACAGAGAG...TTCTGAGTCCTGGTTCCACAGCTTGGGTACTGATGGCAATCTTGGCCAAGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR GCA 90 bp | GACAACTTGGCCAAGATTGCCATCAGTACCCAAGCTGTGGAACCAGGACTCAGAGGCCCAGAGGGCTACTaGATTCCACTTTTTCACTTC | + |
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Preference number: 4 (lower is better) Translates to: DNLAKIAISTQAVEPGLRGPEGY*IPLFHF Trigger: GAAGTGAAAAAGTGGAATGCAGTAGCCCTCTGGGCC...TCTGAGTCCTGGTTCCACAGCTTGGGTACTGATGGCAATCTTGGCCAAGTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR CCA 90 bp | GAATCCCACATTCTTCCCTCTTTCAGCTGCCCACTGCTGTCACACAGGAGAAAGGAAACCAATCCCTGGTaGCAAAAAGGTTGGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: ESHILPSFSCPLLSHRRKETNPW*QKGWGL Trigger: CAGTCCCCAACCTTTTTGCCACCAGGGATTGGTTTC...CTTTCTCCTGTGTGACAGCAGTGGGCAGCTGAAAGAGGGAAGAATGTGGGATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR CCA 90 bp | GACAACTTGGCCAAGATTGCCATCAGTACCCAAGCTGTGGAACCAGGACTCAGACATGAAACCAATCCCTaGTGGCAAAAAGGTTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: DNLAKIAISTQAVEPGLRHETNP*WQKGWG Trigger: TCCCCAACCTTTTTGCCACCAGGGATTGGTTTCATG...TCTGAGTCCTGGTTCCACAGCTTGGGTACTGATGGCAATCTTGGCCAAGTTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| 3UTR CAA 72 bp | GTACCCAAGCTGTGGAACCAGGACTCAGAACTGGGTTaGATGACTGAATCCCACATTCTTCCCTCTTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: VPKLWNQDSELG*MTESHILPSFS Trigger: GCTGAAAGAGGGAAGAATGTGGGATTCAGTCATCAAACCCAGTTCTGAGTCCTGGTTCCACAGCTTGGGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR GCA 90 bp | TTAGTCCTCAGAAGCCCACAGTACAGAGGAGGAAAGTTCAGAGTAGAGAGACAACTTTCAGCTGCCCACTaGTGTCACACAGGAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: LVLRSPQYRGGKFRVERQLSAAH*CHTGER Trigger: TCTTTCTCCTGTGTGACAGCAGTGGGCAGCTGAAAG...TTGTCTCTCTACTCTGAACTTTCCTCCTCTGTACTGTGGGCTTCTGAGGACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR CCA 90 bp | TTAGTCCTCAGAAGCCCACAGTACAGAGGAGGAAAGTTCAGAGTAGAGAGACAATCAGTACCCAAGCTGTaGAACCAGGACTCAGAACTG | + |
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Preference number: 4 (lower is better) Translates to: LVLRSPQYRGGKFRVERQSVPKL*NQDSEL Trigger: CAGTTCTGAGTCCTGGTTCCACAGCTTGGGTACTGA...TTGTCTCTCTACTCTGAACTTTCCTCCTCTGTACTGTGGGCTTCTGAGGACTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR TCA 90 bp | TTAGTCCTCAGAAGCCCACAGTACAGAGGAGGAAAGTTCAGAGTAGAGAGACAAACTGGGTTTGATGACTaGATCCCACATTCTTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LVLRSPQYRGGKFRVERQTGFDD*IPHSSL Trigger: GAGGGAAGAATGTGGGATTCAGTCATCAAACCCAGT...TTGTCTCTCTACTCTGAACTTTCCTCCTCTGTACTGTGGGCTTCTGAGGACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR CCA 90 bp | TTAGTCCTCAGAAGCCCACAGTACAGAGGAGGAAAGTTCAGAGTAGAGAGACAAAGTAGAGAGACAACTTaGCCAAGATTGCCATCAGTA | + |
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Preference number: 4 (lower is better) Translates to: LVLRSPQYRGGKFRVERQSRETT*PRLPSV Trigger: TACTGATGGCAATCTTGGCCAAGTTGTCTCTCTACT...TTGTCTCTCTACTCTGAACTTTCCTCCTCTGTACTGTGGGCTTCTGAGGACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS GCA 90 bp | CGACCTGTAGGAGCAGAGCCTTCTCCCCAGCCCTTGGTAGAGAAGTaGATGGTCACTGCCGCCCACCCAGAACTGAGACGGGCACTTCCC | + |
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Preference number: 5 (lower is better) Translates to: RPVGAEPSPQPLVEK*MVTAAHPELRRALP Trigger: GGGAAGTGCCCGTCTCAGTTCTGGGTGGGCGGCAGTGACCATGCACTTCTCTACCAAGGGCTGGGGAGAAGGCTCTGCTCCTACAGGTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467617.1 |
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| CDS-3UTR CAA 90 bp | AGAGACAACTTGGCCAAGATTGCCATCAGTACCCAAGCTGTGGAACCAGGACTCTTGCCCGCGCCGCTGTaGGTGCCGCTCGGGGTATCC | + |
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Preference number: 5 (lower is better) Translates to: RDNLAKIAISTQAVEPGLLPAPL*VPLGVS Trigger: GGATACCCCGAGCGGCACCAACAGCGGCGCGGGCAA...GAGTCCTGGTTCCACAGCTTGGGTACTGATGGCAATCTTGGCCAAGTTGTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR CAA 90 bp | ACAACTTGGCCAAGATTGCCATCAGTACCCAAGCTGTGGAACCAGGACTCAGAAACTTCAAAGCGCTTCTaGCCCGCGCCGCTGTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: TTWPRLPSVPKLWNQDSETSKRF*PAPLLV Trigger: CACCAACAGCGGCGCGGGCAAGAAGCGCTTTGAAGT...TTCTGAGTCCTGGTTCCACAGCTTGGGTACTGATGGCAATCTTGGCCAAGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR CAA 90 bp | TCGTCACTAAGTGATGCGCTCAGAGGACAACCCTGCTCTGGCCCCGATGAACAAGATCCACACTCTGCCTaGAGCTGTTGGATTCCTCGT | + |
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Preference number: 5 (lower is better) Translates to: SSLSDALRGQPCSGPDEQDPHSA*SCWIPR Trigger: ACGAGGAATCCAACAGCTCAAGGCAGAGTGTGGATC...TTGTTCATCGGGGCCAGAGCAGGGTTGTCCTCTGAGCGCATCACTTAGTGACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS TCA 90 bp | TGCGTATTAGGACAGACGCAGCAAGTGCTTCCTTCATTTCGTCTGTaGTTGGTGCACTGTGGTGGGGCACGGGCAGAAATTACTCACCCT | + |
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Preference number: 5 (lower is better) Translates to: CVLGQTQQVLPSFRL*LVHCGGARAEITHP Trigger: AGGGTGAGTAATTTCTGCCCGTGCCCCACCACAGTGCACCAATCACAGACGAAATGAAGGAAGCACTTGCTGCGTCTGTCCTAATACGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467617.1 |
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| CDS TCA 90 bp | GCGTGGGCTCATGACATGCAGATGCTAATCACAATGCTTCTGCAATaGGCACTTCTCCCCCTGCTCATGTGCGTATTAGGACAGACGCAG | + |
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Preference number: 5 (lower is better) Translates to: AWAHDMQMLITMLLQ*ALLPLLMCVLGQTQ Trigger: CTGCGTCTGTCCTAATACGCACATGAGCAGGGGGAGAAGTGCTCATTGCAGAAGCATTGTGATTAGCATCTGCATGTCATGAGCCCACGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000467617.1 |
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| CDS-3UTR CAA 90 bp | GGAAAGTTCAGAGTAGAGAGACAACTTGGCCAAGATTGCCATCAGTACCCAAGCCACACCTGTCGTGTTTaGAGCCAGCGAGAGATGCAG | + |
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Preference number: 5 (lower is better) Translates to: GKFRVERQLGQDCHQYPSHTCRV*SQREMQ Trigger: CTGCATCTCTCGCTGGCTCAAAACACGACAGGTGTG...GCTTGGGTACTGATGGCAATCTTGGCCAAGTTGTCTCTCTACTCTGAACTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR CAA 90 bp | TGCGCGGTCCATCTACTGCCTCATGATCTCAGGTGGAACAGTTCCAAAACCATCGCTGAGTTTTCAGCCTaGGAAGGGGAGACTCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: CAVHLLPHDLRWNSSKTIAEFSA*EGETLH Trigger: ATGAAGAGTCTCCCCTTCCAAGGCTGAAAACTCAGC...GATGGTTTTGGAACTGTTCCACCTGAGATCATGAGGCAGTAGATGGACCGCGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR CAA 90 bp | CTGAATCCCACATTCTTCCCTCTTTCAGCTGCCCACTGCTGTCACACAGGAGAACTCTGCCTTGAGCTGTaGGATTCCTCGTCACTAAGT | + |
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Preference number: 5 (lower is better) Translates to: LNPTFFPLSAAHCCHTGELCLEL*DSSSLS Trigger: ACTTAGTGACGAGGAATCCAACAGCTCAAGGCAGAG...TTCTCCTGTGTGACAGCAGTGGGCAGCTGAAAGAGGGAAGAATGTGGGATTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS-3UTR CAA 90 bp | AGAGACAACTTGGCCAAGATTGCCATCAGTACCCAAGCTGTGGAACCAGGACTCACAACTTGGCCAAGATaGCCATCAGTACCCAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: RDNLAKIAISTQAVEPGLTTWPR*PSVPKL Trigger: CAGCTTGGGTACTGATGGCAATCTTGGCCAAGTTGT...GAGTCCTGGTTCCACAGCTTGGGTACTGATGGCAATCTTGGCCAAGTTGTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000216225.9 |
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| CDS CCA 90 bp | GCACTGAGCTCTCTTCTATTTAAGAGAACGTGGAATGTGGCTCCTTaGTCCCATTCAGCCTGTAAGGGGATACTTCCACTTTCTTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: ALSSLLFKRTWNVAP*SHSACKGILPLSLG Trigger: TCCCAAAGAAAGTGGAAGTATCCCCTTACAGGCTGAATGGGACCAAGGAGCCACATTCCACGTTCTCTTAAATAGAAGAGAGCTCAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467617.1 |
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| CDS TCA 90 bp | AGACTAGCAAAGCAGGAAAAGTGGAAATATGTTTACAAGCCATGCTaGCAGGTAAAGATGCTTCCTTACGTTACAGACTCCCCATGCGAC | + |
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Preference number: 5 (lower is better) Translates to: RLAKQEKWKYVYKPC*QVKMLPYVTDSPCD Trigger: GTCGCATGGGGAGTCTGTAACGTAAGGAAGCATCTTTACCTGTCAGCATGGCTTGTAAACATATTTCCACTTTTCCTGCTTTGCTAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476110.1 |
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| CDS GCA 72 bp | GGAGCAGAGCCTTCTCCCCAGCCCTTGGTAGAGAAGTaGATGGTCACTGCCGCCCACCCAGAACTGAGACGG | + |
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Preference number: 6 (lower is better) Translates to: GAEPSPQPLVEK*MVTAAHPELRR Trigger: CCGTCTCAGTTCTGGGTGGGCGGCAGTGACCATGCACTTCTCTACCAAGGGCTGGGGAGAAGGCTCTGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467617.1 |
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| CDS CAA 72 bp | ATGCGACCTGTAGGAGCAGAGCCTTCTCCCCAGCCCTaGGTAGAGAAGTGCATGGTCACTGCCGCCCACCCA | + |
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Preference number: 6 (lower is better) Translates to: MRPVGAEPSPQP*VEKCMVTAAHP Trigger: TGGGTGGGCGGCAGTGACCATGCACTTCTCTACCAAGGGCTGGGGAGAAGGCTCTGCTCCTACAGGTCGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467617.1 |
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| CDS CAA 90 bp | CCCTGGAGAATGCGACCTGTAGGAGCAGAGCCTTCTCCCCAGCCCTaGGTAGAGAAGTGCATGGTCACTGCCGCCCACCCAGAACTGAGA | + |
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Preference number: 6 (lower is better) Translates to: PWRMRPVGAEPSPQP*VEKCMVTAAHPELR Trigger: TCTCAGTTCTGGGTGGGCGGCAGTGACCATGCACTTCTCTACCAAGGGCTGGGGAGAAGGCTCTGCTCCTACAGGTCGCATTCTCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467617.1 |
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| CDS TCA 72 bp | GGACAGACGCAGCAAGTGCTTCCTTCATTTCGTCTGTaGTTGGTGCACTGTGGTGGGGCACGGGCAGAAATT | + |
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Preference number: 6 (lower is better) Translates to: GQTQQVLPSFRL*LVHCGGARAEI Trigger: AATTTCTGCCCGTGCCCCACCACAGTGCACCAATCACAGACGAAATGAAGGAAGCACTTGCTGCGTCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467617.1 |
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| CDS GCA 72 bp | CGCAGCAAGTGCTTCCTTCATTTCGTCTGTGATTGGTaGACTGTGGTGGGGCACGGGCAGAAATTACTCACC | + |
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Preference number: 6 (lower is better) Translates to: RSKCFLHFVCDW*TVVGHGQKLLT Trigger: GGTGAGTAATTTCTGCCCGTGCCCCACCACAGTGCACCAATCACAGACGAAATGAAGGAAGCACTTGCTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467617.1 |
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| CDS CCA 72 bp | AGACGCAGCAAGTGCTTCCTTCATTTCGTCTGTGATTaGTGCACTGTGGTGGGGCACGGGCAGAAATTACTC | + |
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Preference number: 6 (lower is better) Translates to: RRSKCFLHFVCD*CTVVGHGQKLL Trigger: GAGTAATTTCTGCCCGTGCCCCACCACAGTGCACCAATCACAGACGAAATGAAGGAAGCACTTGCTGCGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467617.1 |
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| CDS CCA 72 bp | CCATCGAGCGACAACAGGTCCCACAGGGTAGTGGCATaGGTGACATATAGTGGGCAAGAAAAGAAAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: PSSDNRSHRVVA*VTYSGQEKKRR Trigger: TCTTCTTTTCTTTTCTTGCCCACTATATGTCACCCATGCCACTACCCTGTGGGACCTGTTGTCGCTCGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467617.1 |
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| CDS GCA 72 bp | CTTCCACTTTCTTTGGGAAAGGAGGCCCCTCATCAATaGAGATTTCAAATATCCCCATTCTGGGTCTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: LPLSLGKEAPHQ*RFQISPFWVSS Trigger: GCTAGAGACCCAGAATGGGGATATTTGAAATCTGCATTGATGAGGGGCCTCCTTTCCCAAAGAAAGTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467617.1 |
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| CDS CCA 72 bp | TCTCTTCTATTTAAGAGAACGTGGAATGTGGCTCCTTaGTCCCATTCAGCCTGTAAGGGGATACTTCCACTT | + |
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Preference number: 6 (lower is better) Translates to: SLLFKRTWNVAP*SHSACKGILPL Trigger: AAGTGGAAGTATCCCCTTACAGGCTGAATGGGACCAAGGAGCCACATTCCACGTTCTCTTAAATAGAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467617.1 |
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| CDS CAA 90 bp | GAAGTCTGCTTAGATTTGGGAAAAGGACAATCTGCATGCAGTTTTTaGGCGTGGGCTCATGACATGCAGATGCTAATCACAATGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: EVCLDLGKGQSACSF*AWAHDMQMLITMLL Trigger: CAGAAGCATTGTGATTAGCATCTGCATGTCATGAGCCCACGCCAAAAAACTGCATGCAGATTGTCCTTTTCCCAAATCTAAGCAGACTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000467617.1 |
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| CDS CAA 72 bp | TTAGATTTGGGAAAAGGACAATCTGCATGCAGTTTTTaGGCGTGGGCTCATGACATGCAGATGCTAATCACA | + |
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Preference number: 6 (lower is better) Translates to: LDLGKGQSACSF*AWAHDMQMLIT Trigger: TGTGATTAGCATCTGCATGTCATGAGCCCACGCCAAAAAACTGCATGCAGATTGTCCTTTTCCCAAATCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000467617.1 |
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| CDS CCA 72 bp | CAACGAGAGGCAAAAGTTCAACAACTGATTATATCTTaGTTAGATGCAAGGGTATTTCCAACAAAGCATTTG | + |
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Preference number: 6 (lower is better) Translates to: QREAKVQQLIIS*LDARVFPTKHL Trigger: CAAATGCTTTGTTGGAAATACCCTTGCATCTAACCAAGATATAATCAGTTGTTGAACTTTTGCCTCTCGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467617.1 |
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