Pregenerated sensors for RBPMS2 (Homo sapiens)
Ensembl gene IDs: ENSG00000166831Ensembl transcript IDs: ENST00000300069.5, ENST00000560606.5
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGAGAGGGCTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGGAACTTGGGCCTCCCTaGAGCGGGGTGGGTGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: REGFLTTVGPSEKAGAEEELGPP*SGVGAG Trigger: CCCTGCACCCACCCCGCTTCAGGGAGGCCCAAGTTC...CTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAGCCCTCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGGGCTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGGTGAGGCCTCCGAGCTaGATCTGGGCGCCCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: REGFLTTVGPSEKAGAEEVRPPS*IWAPQG Trigger: TCCCTGGGGCGCCCAGATCCAGCTCGGAGGCCTCAC...CTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAGCCCTCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| 3UTR-3UTR CCA 90 bp | AACACCTCACTTCCTCGAGGGGGAGCTACAGAAGCAAGTTTGGGCGGGAGGTCAGTGAGGCCTCCGAGCTaGATCTGGGCGCCCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: NTSLPRGGATEASLGGRSVRPPS*IWAPQG Trigger: TCCCTGGGGCGCCCAGATCCAGCTCGGAGGCCTCAC...TGACCTCCCGCCCAAACTTGCTTCTGTAGCTCCCCCTCGAGGAAGTGAGGTGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| 3UTR-3UTR CCA 90 bp | AGAGAGGGCTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGTGGGGCCACGGAACTTaGGCCTCCCTGAAGCGGGGT | + |
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Preference number: 2 (lower is better) Translates to: REGFLTTVGPSEKAGAEEWGHGT*ASLKRG Trigger: ACCCCGCTTCAGGGAGGCCCAAGTTCCGTGGCCCCA...CTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAGCCCTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| 3UTR-3UTR TCA 90 bp | CTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCCCCATGTCAGGAAGCAGTCCACTaGGTCAGGCTTGGGATTCAC | + |
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Preference number: 2 (lower is better) Translates to: LSYDCWPIREGRSGGAPCQEAVH*VRLGIH Trigger: GTGAATCCCAAGCCTGACTCAGTGGACTGCTTCCTG...ACATGGGGCTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| 3UTR-3UTR TCA 90 bp | AGAGAGGGCTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCAGGAAGCAGTCCACTaGGTCAGGCTTGGGATTCAC | + |
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Preference number: 2 (lower is better) Translates to: REGFLTTVGPSEKAGAEEQEAVH*VRLGIH Trigger: GTGAATCCCAAGCCTGACTCAGTGGACTGCTTCCTG...CTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAGCCCTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| 3UTR-3UTR CAA 90 bp | CTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCCCCATGTGTGGGGCCACGGAACTaGGGCCTCCCTGAAGCGGGG | + |
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Preference number: 3 (lower is better) Translates to: LSYDCWPIREGRSGGAPCVGPRN*GLPEAG Trigger: CCCCGCTTCAGGGAGGCCCAAGTTCCGTGGCCCCAC...ACATGGGGCTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| 3UTR-3UTR CAA 90 bp | AGAGAGGGCTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGTCCACTGAGTCAGGCTaGGGATTCACAGTCTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: REGFLTTVGPSEKAGAEESTESG*GFTVSG Trigger: TCCAGAGACTGTGAATCCCAAGCCTGACTCAGTGGA...CTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAGCCCTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| 3UTR-3UTR CAA 90 bp | AACACCTCACTTCCTCGAGGGGGAGCTACAGAAGCAAGTTTGGGCGGGAGGTCATCCACTGAGTCAGGCTaGGGATTCACAGTCTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: NTSLPRGGATEASLGGRSSTESG*GFTVSG Trigger: TCCAGAGACTGTGAATCCCAAGCCTGACTCAGTGGA...TGACCTCCCGCCCAAACTTGCTTCTGTAGCTCCCCCTCGAGGAAGTGAGGTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR TCA 90 bp | CTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCCCCATGTGGACCCACGGGGCAGTaGGAGGGGCAGCCTCCGCGT | + |
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Preference number: 4 (lower is better) Translates to: LSYDCWPIREGRSGGAPCGPTGQ*EGQPPR Trigger: ACGCGGAGGCTGCCCCTCTCACTGCCCCGTGGGTCC...ACATGGGGCTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000300069.5 |
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| CDS-3UTR TCA 90 bp | CTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCCCCATGTGGGTACCAGCGCACCTaGGCGTGGAGGGCGGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: LSYDCWPIREGRSGGAPCGYQRT*AWRAAA Trigger: TGCCGCCGCCCTCCACGCTCAGGTGCGCTGGTACCC...ACATGGGGCTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR GCA 90 bp | AACACCTCACTTCCTCGAGGGGGAGCTACAGAAGCAAGTTTGGGCGGGAGGTCACCGGTGCTGCCGCCGTaGTCGCCGTCCGGCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: NTSLPRGGATEASLGGRSPVLPP*SPSGFR Trigger: CCTGAAGCCGGACGGCGAGCACGGCGGCAGCACCGG...TGACCTCCCGCCCAAACTTGCTTCTGTAGCTCCCCCTCGAGGAAGTGAGGTGTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300069.5 |
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| CDS-3UTR TCA 90 bp | AACACCTCACTTCCTCGAGGGGGAGCTACAGAAGCAAGTTTGGGCGGGAGGTCAGAACTTGGGCCTCCCTaGAGCGGGGTGGGTGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: NTSLPRGGATEASLGGRSELGPP*SGVGAG Trigger: CCCTGCACCCACCCCGCTTCAGGGAGGCCCAAGTTC...TGACCTCCCGCCCAAACTTGCTTCTGTAGCTCCCCCTCGAGGAAGTGAGGTGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR CCA 90 bp | AACACCTCACTTCCTCGAGGGGGAGCTACAGAAGCAAGTTTGGGCGGGAGGTCAGCTTCAGGTTGCTCATaGTGCGGGGGAGGGGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: NTSLPRGGATEASLGGRSASGCS*CGGGGG Trigger: GCCGCCCCCTCCCCCGCACCATGAGCAACCTGAAGC...TGACCTCCCGCCCAAACTTGCTTCTGTAGCTCCCCCTCGAGGAAGTGAGGTGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000300069.5 |
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| CDS-3UTR CCA 90 bp | CTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCCCCATGTTGGGGCCACGGAACTTaGGCCTCCCTGAAGCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: LSYDCWPIREGRSGGAPCWGHGT*ASLKRG Trigger: ACCCCGCTTCAGGGAGGCCCAAGTTCCGTGGCCCCA...ACATGGGGCTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR CCA 90 bp | CTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCCCCATGTGGGCGGGGTGCGCTGTaGAGAGGTGAACAGAACGGG | + |
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Preference number: 4 (lower is better) Translates to: LSYDCWPIREGRSGGAPCGRGAL*RGEQNG Trigger: CCCGTTCTGTTCACCTCTCCACAGCGCACCCCGCCC...ACATGGGGCTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR CCA 90 bp | AGAGAGGGCTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGGGGCGGGGTGCGCTGTaGAGAGGTGAACAGAACGGG | + |
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Preference number: 4 (lower is better) Translates to: REGFLTTVGPSEKAGAEEGRGAL*RGEQNG Trigger: CCCGTTCTGTTCACCTCTCCACAGCGCACCCCGCCC...CTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAGCCCTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR TCA 90 bp | CTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCCCCATGTCCACAGGGAGGCCGCTaGCAAACAGTGTCCGGACCT | + |
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Preference number: 4 (lower is better) Translates to: LSYDCWPIREGRSGGAPCPQGGR*QTVSGP Trigger: AGGTCCGGACACTGTTTGTCAGCGGCCTCCCTGTGG...ACATGGGGCTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300069.5 |
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| CDS-3UTR GCA 90 bp | AACACCTCACTTCCTCGAGGGGGAGCTACAGAAGCAAGTTTGGGCGGGAGGTCACGTCCGGCTTCAGGTTaGTCATGGTGCGGGGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: NTSLPRGGATEASLGGRSRPASG*SWCGGG Trigger: CCCTCCCCCGCACCATGAGCAACCTGAAGCCGGACG...TGACCTCCCGCCCAAACTTGCTTCTGTAGCTCCCCCTCGAGGAAGTGAGGTGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000300069.5 |
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| CDS-3UTR GCA 90 bp | AGAGAGGGCTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCAGTCCCCTACCCACTaGTTCGAGCGAGCTCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: REGFLTTVGPSEKAGAEEQSPTH*FERALP Trigger: CGGGAGAGCTCGCTCGAAGCAGTGGGTAGGGGACTG...CTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAGCCCTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560606.5 |
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| CDS-3UTR TCA 90 bp | AGAGAGGGCTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCCACAGGGAGGCCGCTaGCAAACAGTGTCCGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: REGFLTTVGPSEKAGAEEPQGGR*QTVSGQ Trigger: TTGTCCGGACACTGTTTGTCAGCGGCCTCCCTGTGG...CTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAGCCCTCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000560606.5 |
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| CDS-3UTR CCA 90 bp | AACACCTCACTTCCTCGAGGGGGAGCTACAGAAGCAAGTTTGGGCGGGAGGTCAGGGTCACATCAAGTTTaGCGGGTGCGGAAGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: NTSLPRGGATEASLGGRSGSHQV*RVRKVG Trigger: CCCCACCTTCCGCACCCGCCAAACTTGATGTGACCC...TGACCTCCCGCCCAAACTTGCTTCTGTAGCTCCCCCTCGAGGAAGTGAGGTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300069.5 |
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| CDS-3UTR CCA 90 bp | CTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCCCCATGTAGCGGCAGTGGCAGTTaGGTAGGTGAACGCAGCATG | + |
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Preference number: 4 (lower is better) Translates to: LSYDCWPIREGRSGGAPCSGSGS*VGERSM Trigger: CATGCTGCGTTCACCTACCCAACTGCCACTGCCGCT...ACATGGGGCTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR CCA 90 bp | AGAGAGGGCTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGAGCGGCAGTGGCAGTTaGGTAGGTGAACGCAGCATG | + |
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Preference number: 4 (lower is better) Translates to: REGFLTTVGPSEKAGAEESGSGS*VGERSM Trigger: CATGCTGCGTTCACCTACCCAACTGCCACTGCCGCT...CTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAGCCCTCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR TCA 90 bp | CTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCCCCATGTACCCTTCATACCCCTTaGACGGCCGGAAGAGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: LSYDCWPIREGRSGGAPCTLHTP*TAGRAS Trigger: ACTTGCTCTTCCGGCCGTTCAAGGGGTATGAAGGGT...ACATGGGGCTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR TCA 90 bp | AGAGAGGGCTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGTCACAGGATCAGCAATaGCAACAGCCGCCTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: REGFLTTVGPSEKAGAEESQDQQ*QQPPHL Trigger: GAGATGAGGCGGCTGTTGTCATTGCTGATCCTGTGA...CTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAGCCCTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR GCA 90 bp | CTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCCCCATGTAGTAACGAATGCACGTaGTTCAGCAGTCCCCTACCC | + |
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Preference number: 4 (lower is better) Translates to: LSYDCWPIREGRSGGAPCSNECT*FSSPLP Trigger: GGGTAGGGGACTGCTGAAGCACGTGCATTCGTTACT...ACATGGGGCTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000560606.5 |
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| CDS-3UTR TCA 90 bp | AACACCTCACTTCCTCGAGGGGGAGCTACAGAAGCAAGTTTGGGCGGGAGGTCATCACAGGATCAGCAATaGCAACAGCCGCCTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: NTSLPRGGATEASLGGRSSQDQQ*QQPPHL Trigger: GAGATGAGGCGGCTGTTGTCATTGCTGATCCTGTGA...TGACCTCCCGCCCAAACTTGCTTCTGTAGCTCCCCCTCGAGGAAGTGAGGTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR GCA 90 bp | CTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCCCCATGTACCAACAGGCTGTCTTaGAGTGAGCTTGATCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: LSYDCWPIREGRSGGAPCTNRLS*SELDQG Trigger: TCCCTGATCAAGCTCACTGCAAGACAGCCTGTTGGT...ACATGGGGCTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR GCA 90 bp | AGAGAGGGCTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGACCAACAGGCTGTCTTaGAGTGAGCTTGATCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: REGFLTTVGPSEKAGAEETNRLS*SELDQG Trigger: TCCCTGATCAAGCTCACTGCAAGACAGCCTGTTGGT...CTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAGCCCTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR CCA 90 bp | AACACCTCACTTCCTCGAGGGGGAGCTACAGAAGCAAGTTTGGGCGGGAGGTCACTTTCTTACGACTGTTaGCCCATCCGAGAAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: NTSLPRGGATEASLGGRSLSYDC*PIREGR Trigger: CCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAG...TGACCTCCCGCCCAAACTTGCTTCTGTAGCTCCCCCTCGAGGAAGTGAGGTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR GCA 90 bp | CTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCCCCATGTTGTTCAAGTAACGAATaGACGTGCTTCAGCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LSYDCWPIREGRSGGAPCCSSNE*TCFSSP Trigger: GGGACTGCTGAAGCACGTGCATTCGTTACTTGAACA...ACATGGGGCTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560606.5 |
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| CDS-3UTR TCA 90 bp | AACACCTCACTTCCTCGAGGGGGAGCTACAGAAGCAAGTTTGGGCGGGAGGTCAAACATTAAACTTATCTaGCAGGGCGAACGAGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: NTSLPRGGATEASLGGRSNIKLI*QGERGR Trigger: GCGACCTCGTTCGCCCTGTCAGATAAGTTTAATGTT...TGACCTCCCGCCCAAACTTGCTTCTGTAGCTCCCCCTCGAGGAAGTGAGGTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR TCA 90 bp | CTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCCCCATGTACAAAGGCGTACTGCTaGAGAATGGAAACCCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: LSYDCWPIREGRSGGAPCTKAYC*RMETLF Trigger: GAAAAGGGTTTCCATTCTTCAGCAGTACGCCTTTGT...ACATGGGGCTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR TCA 90 bp | AGAGAGGGCTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGACAAAGGCGTACTGCTaGAGAATGGAAACCCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: REGFLTTVGPSEKAGAEETKAYC*RMETLF Trigger: GAAAAGGGTTTCCATTCTTCAGCAGTACGCCTTTGT...CTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAGCCCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR GCA 90 bp | AACACCTCACTTCCTCGAGGGGGAGCTACAGAAGCAAGTTTGGGCGGGAGGTCAATTTTCTTAAACAAATaGCAGACACAAAGGCGTACT | + |
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Preference number: 4 (lower is better) Translates to: NTSLPRGGATEASLGGRSIFLNK*QTQRRT Trigger: AGTACGCCTTTGTGTCTGGCATTTGTTTAAGAAAAT...TGACCTCCCGCCCAAACTTGCTTCTGTAGCTCCCCCTCGAGGAAGTGAGGTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS GCA 90 bp | GCGCCGCCGGAGCCCGCGCCGGAGCCGGTGCCGGTGCTGCCGCCGTaGTCGCCGTCCGGCTTCAGGTTGCTCATGGTGCGGGGGAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: APPEPAPEPVPVLPP*SPSGFRLLMVRGRG Trigger: CCCCCTCCCCCGCACCATGAGCAACCTGAAGCCGGACGGCGAGCACGGCGGCAGCACCGGCACCGGCTCCGGCGCGGGCTCCGGCGGCGC 80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000300069.5 |
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| CDS GCA 90 bp | CCTCCTCCAGGGCGCCGCCGGAGCCCGCGCCGGAGCCGGTGCCGGTaGTGCCGCCGTGCTCGCCGTCCGGCTTCAGGTTGCTCATGGTGC | + |
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Preference number: 5 (lower is better) Translates to: PPPGRRRSPRRSRCR*CRRARRPASGCSWC Trigger: GCACCATGAGCAACCTGAAGCCGGACGGCGAGCACGGCGGCAGCACCGGCACCGGCTCCGGCGCGGGCTCCGGCGGCGCCCTGGAGGAGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000300069.5 |
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| CDS-3UTR CAA 90 bp | CTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCCCCATGTAGGGTCACATCAAGTTaGGCGGGTGCGGAAGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: LSYDCWPIREGRSGGAPCRVTSS*AGAEGG Trigger: CCCACCTTCCGCACCCGCCAAACTTGATGTGACCCT...ACATGGGGCTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000300069.5 |
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| CDS-3UTR CAA 90 bp | AACACCTCACTTCCTCGAGGGGGAGCTACAGAAGCAAGTTTGGGCGGGAGGTCAGACCCTTCATACCCCTaGAACGGCCGGAAGAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: NTSLPRGGATEASLGGRSDPSYP*NGRKSK Trigger: CTTGCTCTTCCGGCCGTTCAAGGGGTATGAAGGGTC...TGACCTCCCGCCCAAACTTGCTTCTGTAGCTCCCCCTCGAGGAAGTGAGGTGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR CAA 90 bp | CTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCCCCATGTGCTTTCTTACGACTGTaGGCCCATCCGAGAAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LSYDCWPIREGRSGGAPCAFLRL*AHPRRQ Trigger: CTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAGC...ACATGGGGCTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR CAA 90 bp | AACACCTCACTTCCTCGAGGGGGAGCTACAGAAGCAAGTTTGGGCGGGAGGTCAGCTTTCTTACGACTGTaGGCCCATCCGAGAAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: NTSLPRGGATEASLGGRSAFLRL*AHPRRQ Trigger: CTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAGC...TGACCTCCCGCCCAAACTTGCTTCTGTAGCTCCCCCTCGAGGAAGTGAGGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR CAA 90 bp | AGAGAGGGCTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGTGTCTTGCAGTGAGCTaGATCAGGGACCCTTCATAC | + |
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Preference number: 5 (lower is better) Translates to: REGFLTTVGPSEKAGAEECLAVS*IRDPSY Trigger: GTATGAAGGGTCCCTGATCAAGCTCACTGCAAGACA...CTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAGCCCTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR CAA 90 bp | AACACCTCACTTCCTCGAGGGGGAGCTACAGAAGCAAGTTTGGGCGGGAGGTCATGTCTTGCAGTGAGCTaGATCAGGGACCCTTCATAC | + |
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Preference number: 5 (lower is better) Translates to: NTSLPRGGATEASLGGRSCLAVS*IRDPSY Trigger: GTATGAAGGGTCCCTGATCAAGCTCACTGCAAGACA...TGACCTCCCGCCCAAACTTGCTTCTGTAGCTCCCCCTCGAGGAAGTGAGGTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR CAA 90 bp | CTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCCCCATGTCTTCTCACGTTTTGGTaGGTTTCGAGGTTTGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: LSYDCWPIREGRSGGAPCLLTFW*VSRFGK Trigger: CTTTCCAAACCTCGAAACCAACCAAAACGTGAGAAG...ACATGGGGCTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR CAA 90 bp | AGAGAGGGCTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGCTTCTCACGTTTTGGTaGGTTTCGAGGTTTGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: REGFLTTVGPSEKAGAEELLTFW*VSRFGK Trigger: CTTTCCAAACCTCGAAACCAACCAAAACGTGAGAAG...CTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAGCCCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS-3UTR CAA 90 bp | AGAGAGGGCTTTCTTACGACTGTTGGCCCATCCGAGAAGGCAGGAGCGGAGGAGAATACTTCTCACGTTTaGGTTGGTTTCGAGGTTTGG | + |
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Preference number: 5 (lower is better) Translates to: REGFLTTVGPSEKAGAEENTSHV*VGFEVW Trigger: CCAAACCTCGAAACCAACCAAAACGTGAGAAGTATT...CTCCTCCGCTCCTGCCTTCTCGGATGGGCCAACAGTCGTAAGAAAGCCCTCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000300069.5 ENST00000560606.5 |
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| CDS GCA 72 bp | ACAGTGTCCGGACAATGTTCAAGTAACGAATGCACGTaGTTCAGCAGTCCCCTACCCACTGCTTCGAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: TVSGQCSSNECT*FSSPLPTASSE Trigger: CTCGCTCGAAGCAGTGGGTAGGGGACTGCTGAAGCACGTGCATTCGTTACTTGAACATTGTCCGGACACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560606.5 |
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