RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000265203

Ensembl transcript IDs: ENST00000584701.2

Found 320 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTaGCCTTGGTGTGTGTCCCAGAGGTTCTGTCTGCCCTGGGGCTCT +
Preference number: 1 (lower is better)
Translates to: PFAAPGNLRPGHLQE*PWCVSQRFCLPWGS
Trigger: AGAGCCCCAGGGCAGACAGAACCTCTGGGACACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CAGGCCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCGGCACCGTGCGGGTGTaGAGCAGGTTGCCCGCGGTG +
Preference number: 4 (lower is better)
Translates to: QAPLLLLGTSGRATCRSAGTVRV*SRLPAV
Trigger: CACCGCGGGCAACCTGCTGCACACCCGCACGGTGCC...GGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CAGGCCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCGATGCCCACAGAGAGTaGGCCTCCGGCCGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: QAPLLLLGTSGRATCRSADAHRE*ASGRGL
Trigger: GAGCCCACGGCCGGAGGCGCACTCTCTGTGGGCATC...GGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp CAGGCCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCGGCGATCATAGGTGGTaGAGAGGTGCACGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: QAPLLLLGTSGRATCRSAGDHRW*RGARGR
Trigger: CCGGCCCCGTGCACCTCTTCACCACCTATGATCGCC...GGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTCCGTGGGCTCCCCAATaGCCGTGGCCCGCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCPWAPQ*PWPAAG
Trigger: ACCTGCAGCGGGCCACGGTCATTGGGGAGCCCACGG...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp CAGGCCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCGCCTGGAGACCTGGGTaGGCAGCTCACCGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: QAPLLLLGTSGRATCRSAAWRPG*AAHRPQ
Trigger: TTGGGGACGGTGAGCTGCTCACCCAGGTCTCCAGGC...GGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGGTCACCTCCCCAATaGCCAGGGCCCGGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVWSPPQ*PGPGPA
Trigger: GGCTGGGCCGGGCCCTGGTCATTGGGGAGGTGACCA...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CAGGCCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCGCTCCCTGGACTGTGTaGAAGGCCGTGGCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QAPLLLLGTSGRATCRSAAPWTV*KAVALL
Trigger: GAGCAGGGCCACGGCCTTGCACACAGTCCAGGGAGC...GGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CAGGCCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCCTCGGCCAGCACGATaGCATCGGGCACCACTCCAC +
Preference number: 4 (lower is better)
Translates to: QAPLLLLGTSGRATCRSAPRPAR*HRAPLH
Trigger: GTGGAGTGGTGCCCGATGCCATCGTGCTGGCCGAGG...GGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGCCCGCAGGAGGGCACTaGTCTGCCCCACGACCTCTG +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWPAGGH*SAPRPL
Trigger: CAGAGGTCGTGGGGCAGACCAGTGCCCTCCTGCGGG...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTCGCTGGCCGGCGACCTaGGGCAAGGTCCACACCTCC +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCRWPAT*GKVHTS
Trigger: GGAGGTGTGGACCTTGCCCCAGGTCGCCGGCCAGCG...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGGGGCCACCCCTGGTaGGTCTTCGGCTGCAGCGTC +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVWGHPW*VFGCSV
Trigger: GACGCTGCAGCCGAAGACTCACCAGGGGTGGCCCCA...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTCCTCCCACGTCTGGCTaGCTCCACCAAGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGPPTSG*LHQGAP
Trigger: TGGGGCCCCTTGGTGGAGGCAGCCAGACGTGGGAGG...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTCCCACACCCCACGTTGGGTaGTGTAGCGTGGGCCCGGGA +
Preference number: 4 (lower is better)
Translates to: LLGTSGRATCRSALGVCPTPHVG*CSVGPG
Trigger: TCCCGGGCCCACGCTACAGCACCCAACGTGGGGTGT...GGGACACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGCCAGCAGGTGCCCTGTaGCCTCCACCAAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVPAGAL*PPPRPP
Trigger: TGGGGGCCTTGGTGGAGGGCACAGGGCACCTGCTGG...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTCCCAGCTTCCCGGCCGTCTaGAGCACCGTGGGCACCTTG +
Preference number: 4 (lower is better)
Translates to: LLGTSGRATCRSALGVCPSFPAV*STVGTL
Trigger: CAAGGTGCCCACGGTGCTGCAGACGGCCGGGAAGCT...GGGACACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CAGGCCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCTCTGCCCTGGGGCTCTaGCTATGGGGCCCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: QAPLLLLGTSGRATCRSASALGL*LWGPSL
Trigger: TAGGGAAGGGCCCCATAGGCAGAGCCCCAGGGCAGA...GGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGATGCTCAGCACCTCCTaGCCCGGGACGCTGTCCACC +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWMLSTS*PGTLST
Trigger: GGTGGACAGCGTCCCGGGCCAGGAGGTGCTGAGCAT...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGCCACGCCCCTGGTCTaGCTGCTGGTGAGGACCACC +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCATPLV*LLVRTT
Trigger: GGTGGTCCTCACCAGCAGCCAGACCAGGGGCGTGGC...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CAGGCCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCCCGGGAGCTCCATGTaGCTGAAGTGCTCCTGCGTG +
Preference number: 4 (lower is better)
Translates to: QAPLLLLGTSGRATCRSAPGSSM*LKCSCV
Trigger: CACGCAGGAGCACTTCAGCCACATGGAGCTCCCGGG...GGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGCTGCCCCACGACCTCTaGCCGAGCATAGTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWLPHDL*PSIVGL
Trigger: GAGGCCCACTATGCTCGGCCAGAGGTCGTGGGGCAG...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CAGGCCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCGCAGGGACAACCACATaGGGTGTCACCCCCACCCCT +
Preference number: 4 (lower is better)
Translates to: QAPLLLLGTSGRATCRSAAGTTT*GVTPTP
Trigger: AGGGGTGGGGGTGACACCCCATGTGGTTGTCCCTGC...GGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGGCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGAGGCGGAGGTGCCCATaGGATTCCCCCACACGTGGG +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVRRRCP*DSPTRG
Trigger: CCCACGTGTGGGGGAATCTCATGGGCACCTCCGCCT...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTAGAGGTCCTTGTGTaGGCCGTAGCGCTGGCCGGC +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCVEVLV*AVALAG
Trigger: GCCGGCCAGCGCTACGGCTCACACAAGGACCTCTAC...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTCGTGGCCCTGCTCTGTaGAGCTGCCTTCCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGRGPAL*SCLPPL
Trigger: CAAGGGCGGAAGGCAGCTGCACAGAGCAGGGCCACG...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGGAACTCCCCCATCATaGTCAGCACCTCCTGGCCCG +
Preference number: 4 (lower is better)
Translates to: PLCCSWEPQAGPPAGVPLGTPPS*SAPPGP
Trigger: CGGGCCAGGAGGTGCTGAGCATGATGGGGGAGTTCC...CAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTAGGAGGGCACTGGTCTaGCCCACGACCTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCRRALV*PTTSGR
Trigger: TCGGCCAGAGGTCGTGGGGCAGACCAGTGCCCTCCT...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGCCAAGTCCACAGCTGTaGGGTAGGCGCCCTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVPSPQL*GRRPGP
Trigger: TGGCCCAGGGCGCCTACCGCACAGCTGTGGACTTGG...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTCCCTACAGGTGGTCCTaGAGGCCTGGGCTCCGCTTC +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGPYRWS*RPGLRF
Trigger: GAAGCGGAGCCCAGGCCTGCAGGACCACCTGTAGGG...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTCGGCTGTCAGCACACTaGCCAGCGTCTGCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGRLSAH*PASAGL
Trigger: CAGACCCGCAGACGCTGGCCAGTGTGCTGACAGCCG...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTCCCGGAATGCCAGAGACCTaGCCTCCTGTGCAGTGCCGG +
Preference number: 4 (lower is better)
Translates to: LLGTSGRATCRSALGVCPGMPET*PPVQCR
Trigger: CCGGCACTGCACAGGAGGCCAGGTCTCTGGCATTCC...GGGACACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGGCAGTGGACTACCCCTaGAAGGGCGCTGCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWAVDYP*KGAAQS
Trigger: ACTCTGCGCAGCGCCCTTCCAGGGGTAGTCCACTGC...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTTTCTGTGGGCCCGATaGCTCGCACCAGGAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWFLWAR*LAPGAW
Trigger: CCAGGCTCCTGGTGCGAGCCATCGGGCCCACAGAAA...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGAGCGGCTCCCACACCTaGCGCAGGACATATGGGGCC +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVSGSHT*RRTYGA
Trigger: GGCCCCATATGTCCTGCGCCAGGTGTGGGAGCCGCT...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGGGCACAGCAGAGGATaGCCCTCCAGGGTTGTGGCG +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGGHSRG*PSRVVA
Trigger: CGCCACAACCCTGGAGGGCCATCCTCTGCTGTGCCC...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTCCCTTGGGTGCTGTAGCGTaGGCCCGGGAGCTCCATGTG +
Preference number: 4 (lower is better)
Translates to: LLGTSGRATCRSALGVCPLGAVA*ARELHV
Trigger: CACATGGAGCTCCCGGGCCCACGCTACAGCACCCAA...GGGACACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTCAGCCGCACCAGCTGTaGCCCCACGGCCTTCACTGT +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGQPHQL*PHGLHC
Trigger: ACAGTGAAGGCCGTGGGGCCACAGCTGGTGCGGCTG...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGGTAGGTCTGTGGTaGCTGGCAGCCCCCACTGGT +
Preference number: 4 (lower is better)
Translates to: PLCCSWEPQAGPPAGVPLVVGLW*LAAPTG
Trigger: ACCAGTGGGGGCTGCCAGCCACCACAGACCTACCAC...CAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGCCCTTCCCTACAGGTaGTCCTGCAGGCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGALPYR*SCRPGL
Trigger: GAGCCCAGGCCTGCAGGACCACCTGTAGGGAAGGGC...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGCCCCTTTGCTGCTCCTaGGAACCTCAGGCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVPLCCS*EPQAGP
Trigger: TGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGCGGTGCGGTGGCTGGTaGGCAGATACACCCCACGTT +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVRCGGW*ADTPHV
Trigger: AACGTGGGGTGTATCTGCTCACCAGCCACCGCACCG...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGCAGGTTGCCCGCGGTaGTCTCACCTACCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCAGCPR*SHLPVW
Trigger: CCACACTGGTAGGTGAGATCACCGCGGGCAACCTGC...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGAGCCAGGCCTCGCCGTaGTTGTCGATGAAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWSQASP*LSMKVR
Trigger: CCTCACCTTCATCGACAATCACGGCGAGGCCTGGCT...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp CAGGCCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCAGGTCTGCTGTGAGCTaGGAGGCCAGAGACTCCAAG +
Preference number: 4 (lower is better)
Translates to: QAPLLLLGTSGRATCRSARSAVS*EARDSK
Trigger: CTTGGAGTCTCTGGCCTCTCAGCTCACAGCAGACCT...GGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp CTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTCCCCCTGGAGGTCTGCTGTaGGCTGAGAGGCCAGAGACT +
Preference number: 4 (lower is better)
Translates to: LLGTSGRATCRSALGVCPPGGLL*AERPET
Trigger: AGTCTCTGGCCTCTCAGCTCACAGCAGACCTCCAGG...GGGACACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGCCTGCTCTGTGCAGCTaGCTTCCGCCCTTGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PLCCSWEPQAGPPAGVPLPALCS*LPPLSF
Trigger: GAAGGACAAGGGCGGAAGGCAGCTGCACAGAGCAGG...CAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGCAAGGCCGTGGCCCTaGTCTGTGCAGCTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCARPWP*SVQLPS
Trigger: GGAAGGCAGCTGCACAGAGCAGGGCCACGGCCTTGC...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGCTTTCTCCAGGGCCTaGTCGGCCGGAGTCCCCACA +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCAFSRA*SAGVPT
Trigger: TGTGGGGACTCCGGCCGAGCAGGCCCTGGAGAAAGC...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTCCTCAGACGCAGCCTaGAGGCCGGCATTGAGCTTG +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWSSDAA*RPALSL
Trigger: CAAGCTCAATGCCGGCCTGCAGGCTGCGTCTGAGGA...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTCCACCAGCTGTTaGCATACCAGCCGCACCAGC +
Preference number: 4 (lower is better)
Translates to: PLCCSWEPQAGPPAGVPLVSTSC*HTSRTS
Trigger: GCTGGTGCGGCTGGTATGGCAACAGCTGGTGGACAC...CAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTCCCGTCCTGCATGGTGTGTaGAAAGGCCTCGGCCGCAGA +
Preference number: 4 (lower is better)
Translates to: LLGTSGRATCRSALGVCPVLHGV*KGLGRR
Trigger: TCTGCGGCCGAGGCCTTTGCACACACCATGCAGGAC...GGGACACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTCCCATGACCGTGGCCCGCTaGAGGTCCTGCATGGTGTGT +
Preference number: 4 (lower is better)
Translates to: LLGTSGRATCRSALGVCPMTVAR*RSCMVC
Trigger: ACACACCATGCAGGACCTGCAGCGGGCCACGGTCAT...GGGACACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTTCAGGCCGGGCCACCTaGAGGAGTGCCCTTGGTGTG +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCSGRAT*RSALGV
Trigger: CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGA...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTCTGTGTGCAAGGCCGTaGCCCTGCTCTGTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCLCARP*PCSVQL
Trigger: CAGCTGCACAGAGCAGGGCCACGGCCTTGCACACAG...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTACCCAGGGGGAGGCCTaGCTCCTGCACAAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCTQGEA*LLHKSS
Trigger: GGAGCTTTTGTGCAGGAGCCAGGCCTCCCCCTGGGT...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTCCCCCCATTCTCTCATCATaGGGACCCAGGGGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LLGTSGRATCRSALGVCPPILSS*GPRGRP
Trigger: AGGCCTCCCCCTGGGTCCCCATGATGAGAGAATGGG...GGGACACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGAGCACCAGGCTTGGCTaGAACAGGTGTGTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: PLCCSWEPQAGPPAGVPLSTRLG*NRCVGP
Trigger: TGGCCCCACACACCTGTTCCAGCCAAGCCTGGTGCT...CAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGAGTGCTGGGACTTGTaGGGGAGGCTCGGGGGTGCT +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCECWDL*GRLGGA
Trigger: AGCACCCCCGAGCCTCCCCCACAAGTCCCAGCACTC...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGGAGGCTGGTGAGTGCTaGGACTTGTGGGGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVEAGEC*DLWGRL
Trigger: GAGCCTCCCCCACAAGTCCCAGCACTCACCAGCCTC...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTAGATTCCCCCACACGTaGGCCACCAGGAACTCCCCC +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGRFPHT*ATRNSP
Trigger: GGGGGAGTTCCTGGTGGCCCACGTGTGGGGGAATCT...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTACCTCCTGGAGGCAGTaGACTACCCCTGGAAGGGCG +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGTSWRQ*TTPGRA
Trigger: CGCCCTTCCAGGGGTAGTCCACTGCCTCCAGGAGGT...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGCTGGCGCAGGACATATaGGGCCAACACACCCAGGAC +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWLAQDI*GQHTQD
Trigger: GTCCTGGGTGTGTTGGCCCCATATGTCCTGCGCCAG...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGCCGTGGCGGTGCGGTaGCTGGTGAGCAGATACACC +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCAVAVR*LVSRYT
Trigger: GGTGTATCTGCTCACCAGCCACCGCACCGCCACGGC...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTCCCTCTCACCTACCAGTGTaGCCCAGCCCAGCGACTGCA +
Preference number: 4 (lower is better)
Translates to: LLGTSGRATCRSALGVCPSHLPV*PSPATA
Trigger: TGCAGTCGCTGGGCTGGGCCACACTGGTAGGTGAGA...GGGACACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTAGGTGAGCTCCTCTaGAGAGGGGACAGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCVGELL*RGDSRG
Trigger: CCCCCTGCTGTCCCCTCTCCAGAGGAGCTCACCTAC...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGAGGCCTTGCCTGTGGTaGCACTCATGGCCATCTGGG +
Preference number: 4 (lower is better)
Translates to: PLCCSWEPQAGPPAGVPLRPCLW*HSWPSG
Trigger: CCCAGATGGCCATGAGTGCCACCACAGGCAAGGCCT...CAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTCCGTCTGCAGCACCGTaGGCACCTTGGCACGCAGAG +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCPSAAP*APWHAE
Trigger: CTCTGCGTGCCAAGGTGCCCACGGTGCTGCAGACGG...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGGACCGCTCAGTTTGGTaGCCATCTTGGCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWDRSVW*PSWPPA
Trigger: AGCTGGGGGCCAAGATGGCCACCAAACTGAGCGGTC...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGCAGACCGCTCAGTTTaGTGGCCATCTTGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PLCCSWEPQAGPPAGVPLADRSV*WPSWPP
Trigger: TGGGGGCCAAGATGGCCACCAAACTGAGCGGTCTGC...CAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTAGCAGCCTGGAGACCTaGGTGAGCAGCTCACCGTCC +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGSSLET*VSSSPS
Trigger: GGACGGTGAGCTGCTCACCCAGGTCTCCAGGCTGCT...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTCCCGCTGGAGCATCTCCTTaGCCCTGGCGAGAGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LLGTSGRATCRSALGVCPAGASP*PWREPL
Trigger: AAGAGGCTCTCGCCAGGGCCAAGGAGATGCTCCAGC...GGGACACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGGTCCTGCAGGCCTaGGCTCCGCTTCACCCTCAG +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCVVLQA*APLHPQ
Trigger: CTGAGGGTGAAGCGGAGCCCAGGCCTGCAGGACCAC...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTCTTCTGAGAGGCTGGTaGGTGCTGGGACTTGTGGGG +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGLLRGW*VLGLVG
Trigger: CCCCACAAGTCCCAGCACTCACCAGCCTCTCAGAAG...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp CCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGTGGACACGGGCACCGTaGAGAAGAAGTCAGACTCGC +
Preference number: 4 (lower is better)
Translates to: PLCCSWEPQAGPPAGVPLWTRAP*RRSQTR
Trigger: GCGAGTCTGACTTCTTCTTCACGGTGCCCGTGTCCA...CAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGGTGTCCAGAGTTCACTaGCAGAGTCATCAGGCCGGC +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWVSRVH*QSHQAG
Trigger: GCCGGCCTGATGACTCTGTCAGTGAACTCTGGACAC...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTCGTTCAGGGAGCTCTaGACCCCGGCTGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVSFREL*TPAVST
Trigger: TGTGCTGACAGCCGGGGTGCAGAGCTCCCTGAACGA...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGGCCTCCTGTGCAGTaGCGGAGATCCAGCACTAAG +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWWPPVQ*RRSSTK
Trigger: CTTAGTGCTGGATCTCCGGCACTGCACAGGAGGCCA...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGAGACCTGGCCTCCTGTaGAGTGCCGGAGATCCAGCA +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVRPGLL*SAGDPA
Trigger: TGCTGGATCTCCGGCACTGCACAGGAGGCCAGGTCT...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGGAGTCCACCAGTGCTTaGCGGATAGCCTCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWESTSA*RIASSS
Trigger: TGAGGACGAGGCTATCCGGCAAGCACTGGTGGACTC...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGGCTGAAGTGCTCCTaGGTGATGTTGGTGCGGCGA +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWWLKCS*VMLVRR
Trigger: TCGCCGCACCAACATCACGCAGGAGCACTTCAGCCA...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTTGGCCGTGGAGTAGCTaGCAGGGTTGTAGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCWPWSS*QGCSAG
Trigger: ACCTGCGCTACAACCCTGGCAGCTACTCCACGGCCA...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGCTGGCGGGGCTCTaGCTCAAAGAAGTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PLCCSWEPQAGPPAGVPLVLAGL*LKEVGA
Trigger: TGCTCCTACTTCTTTGAGGCAGAGCCCCGCCAGCAC...CAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGCCCGCTGCAGGTCCTaGATGGTGTGTGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCARCRS*MVCAKA
Trigger: GGCCTTTGCACACACCATGCAGGACCTGCAGCGGGC...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGCCCACCTGGTAGATaGCCACAGAGAGTGCGCCTC +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVCPPGR*PQRVRL
Trigger: GAGGCGCACTCTCTGTGGGCATCTACCAGGTGGGCA...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGGCGAGAGCCTCTTCTaGAGGGACAACCACATGGGG +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGGESLF*RDNHMG
Trigger: CCCCATGTGGTTGTCCCTGCAGAAGAGGCTCTCGCC...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTCTCAGCAGGCCCCTTTaGTGCTCCTGGGAACCTCAG +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCLSRPL*CSWEPQ
Trigger: CTGAGGTTCCCAGGAGCAGCAAAGGGGCCTGCTGAG...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGAGGTCCAGATCTCCGTaGTGGTGTTGGAGGGGCGGT +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVRSRSP*WCWRGG
Trigger: ACCGCCCCTCCAACACCACCACGGAGATCTGGACCT...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGCCTCGGAGACCACCGTaGAGAAGTCCATGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVPRRPP*RSPCWP
Trigger: TGGCCAGCATGGACTTCTCCACGGTGGTCTCCGAGG...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGAACTCCAGCACTTCCTaGGCTTTGTCCAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWNSSTS*ALSRAS
Trigger: GGAGGCCCTGGACAAAGCCCAGGAAGTGCTGGAGTT...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTAGCTCGCCAGGGCTGTaGAACACTAGCAAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCSSPGL*NTSKRW
Trigger: CCACCGCTTGCTAGTGTTCCACAGCCCTGGCGAGCT...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTAGCAGAGCAGCGGGATaGCCGTGGAGTAGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCSRAAG*PWSSCQ
Trigger: CTGGCAGCTACTCCACGGCCATCCCGCTGCTCTGCT...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGGCTGCAGGTCCTGCATaGTGTGTGCAAAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVAAGPA*CVQRPR
Trigger: CCGAGGCCTTTGCACACACCATGCAGGACCTGCAGC...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTCTGTGGTGGCACTCATaGCCATCTGGGTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCLWWHS*PSGWAW
Trigger: CCATGCCCACCCAGATGGCCATGAGTGCCACCACAG...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGCTTCTGAGGTCACCCTaGAGTAGCGGCTCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: PLCCSWEPQAGPPAGVPLLLRSP*SSGSAD
Trigger: GTCTGCAGAGCCGCTACTCCAGGGTGACCTCAGAAG...CAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGGCTGCCTTCAGGTGTaGGTCTCCGGAGAGCATCTG +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCGCLQV*VSGEHL
Trigger: CAGATGCTCTCCGGAGACCCACACCTGAAGGCAGCC...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGGCATCTCCTTGGCCCTaGCGAGAGCCTCTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVASPWP*REPLLQ
Trigger: CTGCAGAAGAGGCTCTCGCCAGGGCCAAGGAGATGC...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGCTGCAGGAGTGCCCTTaGTGTGTGTCCCAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWLQECP*CVSQRF
Trigger: GAACCTCTGGGACACACACCAAGGGCACTCCTGCAG...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGCAGCGTCTGCGGGTCTaGGATGCTCAGAATCTCATG +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWQRLRV*DAQNLM
Trigger: CATGAGATTCTGAGCATCTCAGACCCGCAGACGCTG...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGAGGTCCACACCTCCGTaGCTTTTGAGGTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVRSTPP*LLRWPC
Trigger: ACAGGGCCACCTCAAAAGTCACGGAGGTGTGGACCT...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTTGCTGGATGGCTTCCTaGATGCCCAGCAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGCWMAS*MPSRFS
Trigger: GGAGAACCTGCTGGGCATGCAGGAAGCCATCCAGCA...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTCCCATCTGCTTAAGGATGTaGGCGATGTCCTCGGCCACG +
Preference number: 4 (lower is better)
Translates to: LLGTSGRATCRSALGVCPICLRM*AMSSAT
Trigger: CGTGGCCGAGGACATCGCGCACATCCTTAAGCAGAT...GGGACACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTTCCATGCTGGCCAAGTaGTGCAGCAGGGTGGGCACA +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCSMLAK*CSRVGT
Trigger: TGTGCCCACCCTGCTGCAGCACTTGGCCAGCATGGA...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGCCGTGGAGAAGTCCATaGTGGCCAAGTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVPWRSP*WPSAAA
Trigger: TGCTGCAGCACTTGGCCAGCATGGACTTCTCCACGG...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTCACAGAGTCCACCAGTaGTTGCCGGATAGCCTCGTC +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCHRVHQ*LPDSLV
Trigger: GACGAGGCTATCCGGCAAGCACTGGTGGACTCTGTG...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGCAGGTAGCCCACATTaGCTGGCAGCACCGACACCT +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCAGSPH*LAAPTP
Trigger: AGGTGTCGGTGCTGCCAGGCAATGTGGGCTACCTGC...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTAGGTCCATGATGAGGTaGTCCGTGTCCTGTAGCGGC +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGRSMMR*SVSCSG
Trigger: GCCGCTACAGGACACGGAGCACCTCATCATGGACCT...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGCCCAGCCCAGCGACTaGATAAGGAAGGCGAACTCC +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCAQPSD*IRKANS
Trigger: GGAGTTCGCCTTCCTTATGCAGTCGCTGGGCTGGGC...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGAAGACAGAATACAGGTaGTGGCGGGGCTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWKTEYR*WRGSAS
Trigger: TGAGGCAGAGCCCCGCCAGCACCTGTATTCTGTCTT...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGCATATAAGGGGCTGCTaGCCACCTGGTAGATGCCCA +
Preference number: 4 (lower is better)
Translates to: PLCCSWEPQAGPPAGVPLHIRGC*PPGRCP
Trigger: TGGGCATCTACCAGGTGGGCAGCAGCCCCTTATATG...CAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTCTCAGGGATATGGGCTaGCTTCAGGTGTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGLRDMG*LQVWVS
Trigger: GGAGACCCACACCTGAAGGCAGCCCATATCCCTGAG...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGCACAAAAGCTCCCTaGACTGTGTGCAAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWCTKAP*TVCKAV
Trigger: CACGGCCTTGCACACAGTCCAGGGAGCTTTTGTGCA...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTCTCTTGATGGCCTGCTaGATGGCTTCCTGCATGCCC +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGLLMAC*MASCMP
Trigger: GGGCATGCAGGAAGCCATCCAGCAGGCCATCAAGAG...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTCCACGTGCAGGATaGTGTTCCCTGGGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVCPRAG*CSLGAG
Trigger: ACCTGCACCCAGGGAACACCATCCTGCACGTGGACA...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTTCCTTCAGGACCTCCTaGAGGCAGTGGACTACCCCT +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGSFRTS*RQWTTP
Trigger: AGGGGTAGTCCACTGCCTCCAGGAGGTCCTGAAGGA...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGGGCAGCACCGACACCTaGAACACAGAGTCCACCAGT +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVGSTDT*NTESTS
Trigger: ACTGGTGGACTCTGTGTTCCAGGTGTCGGTGCTGCC...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTAAGGCCCCCAGGCTTTaGTGGAACTCCAGCACTTCC +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGKAPRL*WNSSTS
Trigger: GGAAGTGCTGGAGTTCCACCAAAGCCTGGGGGCCTT...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTCGGCCGCAGAGCCACTaGTGTGGCTCATCAGGATGT +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCRPQSH*CGSSGC
Trigger: ACATCCTGATGAGCCACACCAGTGGCTCTGCGGCCG...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTCCCAGGCCTTGCCTGTaGTGGCACTCATGGCCATCT +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCPRPCL*WHSWPS
Trigger: AGATGGCCATGAGTGCCACCACAGGCAAGGCCTGGG...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTTGGGCTCATAGGAGATaGCCAGGCGAGGATCGTTCA +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCWAHRR*PGEDRS
Trigger: TGAACGATCCTCGCCTGGTCATCTCCTATGAGCCCA...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGGGTGCAGGTAGGAGATaGTGTAGGGAATGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWGAGRR*CRECQR
Trigger: TCTCTGGCATTCCCTACATCATCTCCTACCTGCACC...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp CACACCTCCAGCTGTAACCTAACCAGAGCTCAGCAGGCCCCTTTGCTGCTCCTGGGGCGCTGCGCAGAGTaGGGATGGCCAGGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: HTSSCNLTRAQQAPLLLLGRCAE*GWPGLS
Trigger: AGAAAGCCCTGGCCATCCTCACTCTGCGCAGCGCCC...CAGGAGCAGCAAAGGGGCCTGCTGAGCTCTGGTTAGGTTACAGCTGGAGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTCACCTCCGTGACTTTTaGGGTGGCCCTGTCAAAGAC +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGHLRDF*GGPVKD
Trigger: GTCTTTGACAGGGCCACCTCAAAAGTCACGGAGGTG...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTATGGCCCTGCGCATCTaGTTAAGGATGTGCGCGATG +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCMALRI*LRMCAM
Trigger: CATCGCGCACATCCTTAAGCAGATGCGCAGGGCCAT...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTCCCATGCATATAAGGGGCTaGTGCCCACCTGGTAGATGC +
Preference number: 4 (lower is better)
Translates to: LLGTSGRATCRSALGVCPMHIRG*CPPGRC
Trigger: GCATCTACCAGGTGGGCAGCAGCCCCTTATATGCAT...GGGACACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGCAGGATGGTGTTCCCTaGGTGCAGGTAGGAGATGAT +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWQDGVP*VQVGDD
Trigger: ATCATCTCCTACCTGCACCCAGGGAACACCATCCTG...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTTCCAGATCTCCGTGGTaGTGTTGGAGGGGCGGTTGT +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCSRSPW*CWRGGC
Trigger: ACAACCGCCCCTCCAACACCACCACGGAGATCTGGA...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CACACCTCCAGCTGTAACCTAACCAGAGCTCAGCAGGCCCCTTTGCTGCTCCTGAGTGCTGCAGCAGGGTaGGCACACGGTCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: HTSSCNLTRAQQAPLLLLSAAAG*AHGPPA
Trigger: CGCTGGTGGACCGTGTGCCCACCCTGCTGCAGCACT...CAGGAGCAGCAAAGGGGCCTGCTGAGCTCTGGTTAGGTTACAGCTGGAGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGTCTCCAGTTCAGCCATaGCGTCAAAACGCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: PLCCSWEPQAGPPAGVPLSPVQP*RQNAGS
Trigger: GCTACCTGCGTTTTGACGCCATGGCTGAACTGGAGA...CAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGCACTCATGGCCATCTaGGTGGGCATGGATGCATAT +
Preference number: 4 (lower is better)
Translates to: PLCCSWEPQAGPPAGVPLALMAI*VGMDAY
Trigger: ATATGCATCCATGCCCACCCAGATGGCCATGAGTGC...CAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTCGCTTCACCCTCAGCTaGTTGTGCTGGAGCATCTCC +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCRFTLS*LCWSIS
Trigger: GGAGATGCTCCAGCACAACCAGCTGAGGGTGAAGCG...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGAATCTCATGGCTCTTaGTGGCCTGCTGGATGGCTT +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCESHGS*WPAGWL
Trigger: AAGCCATCCAGCAGGCCATCAAGAGCCATGAGATTC...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTAAGCAGTTCCTCTTCTaGGAGGCTGGTGAGTGCTGG +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCKQFLF*EAGECW
Trigger: CCAGCACTCACCAGCCTCTCAGAAGAGGAACTGCTT...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp CACACCTCCAGCTGTAACCTAACCAGAGCTCAGCAGGCCCCTTTGCTGCTCCTGCGCTCATGGGCACAGTaGTGTCGGGCTCCACACCAG +
Preference number: 4 (lower is better)
Translates to: HTSSCNLTRAQQAPLLLLRSWAQ*CRAPHQ
Trigger: CTGGTGTGGAGCCCGACATCACTGTGCCCATGAGCG...CAGGAGCAGCAAAGGGGCCTGCTGAGCTCTGGTTAGGTTACAGCTGGAGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGTCTGCGGGTCTGAGATaGTCAGAATCTCATGGCTCT +
Preference number: 4 (lower is better)
Translates to: PLCCSWEPQAGPPAGVPLSAGLR*SESHGS
Trigger: AGAGCCATGAGATTCTGAGCATCTCAGACCCGCAGA...CAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CACACCTCCAGCTGTAACCTAACCAGAGCTCAGCAGGCCCCTTTGCTGCTCCTGATGCTGGCCAAGTGCTaGAGCAGGGTGGGCACACGG +
Preference number: 4 (lower is better)
Translates to: HTSSCNLTRAQQAPLLLLMLAKC*SRVGTR
Trigger: CCGTGTGCCCACCCTGCTGCAGCACTTGGCCAGCAT...CAGGAGCAGCAAAGGGGCCTGCTGAGCTCTGGTTAGGTTACAGCTGGAGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTTCCATGTGGCTGAAGTaGTCCTGCGTGATGTTGGTG +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCSMWLK*SCVMLV
Trigger: CACCAACATCACGCAGGAGCACTTCAGCCACATGGA...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CACACCTCCAGCTGTAACCTAACCAGAGCTCAGCAGGCCCCTTTGCTGCTCCTGAGGGGGTGGTGGGGGTaGTTCCTCTACCACCAGCTC +
Preference number: 4 (lower is better)
Translates to: HTSSCNLTRAQQAPLLLLRGWWG*FLYHQL
Trigger: GAGCTGGTGGTAGAGGAAGCACCCCCACCACCCCCT...CAGGAGCAGCAAAGGGGCCTGCTGAGCTCTGGTTAGGTTACAGCTGGAGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTCCCATGCTCAGAATCTCATaGCTCTTGATGGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LLGTSGRATCRSALGVCPMLRIS*LLMACW
Trigger: CCAGCAGGCCATCAAGAGCCATGAGATTCTGAGCAT...GGGACACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CACACCTCCAGCTGTAACCTAACCAGAGCTCAGCAGGCCCCTTTGCTGCTCCTGCTCGCACCAGGAGCCTaGGATCCTCAGACGCAGCCT +
Preference number: 4 (lower is better)
Translates to: HTSSCNLTRAQQAPLLLLLAPGA*DPQTQP
Trigger: AGGCTGCGTCTGAGGATCCCAGGCTCCTGGTGCGAG...CAGGAGCAGCAAAGGGGCCTGCTGAGCTCTGGTTAGGTTACAGCTGGAGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTAAGAAGGAGTTTCTGTaGGCCCGATGGCTCGCACCA +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCKKEFL*ARWLAP
Trigger: TGGTGCGAGCCATCGGGCCCACAGAAACTCCTTCTT...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CACACCTCCAGCTGTAACCTAACCAGAGCTCAGCAGGCCCCTTTGCTGCTCCTGGGCCCTCCAGGGTTGTaGCGCAGGTCCATGATGAGG +
Preference number: 4 (lower is better)
Translates to: HTSSCNLTRAQQAPLLLLGPPGL*RRSMMR
Trigger: CCTCATCATGGACCTGCGCCACAACCCTGGAGGGCC...CAGGAGCAGCAAAGGGGCCTGCTGAGCTCTGGTTAGGTTACAGCTGGAGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CACACCTCCAGCTGTAACCTAACCAGAGCTCAGCAGGCCCCTTTGCTGCTCCTGGCAGCGGGATGGCCGTaGAGTAGCTGCCAGGGTTGT +
Preference number: 4 (lower is better)
Translates to: HTSSCNLTRAQQAPLLLLAAGWP*SSCQGC
Trigger: ACAACCCTGGCAGCTACTCCACGGCCATCCCGCTGC...CAGGAGCAGCAAAGGGGCCTGCTGAGCTCTGGTTAGGTTACAGCTGGAGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTACAGAATACAGGTGCTaGCGGGGCTCTGCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCTEYRC*RGSASK
Trigger: CTTTGAGGCAGAGCCCCGCCAGCACCTGTATTCTGT...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTCCATCTGGGTGGGCATaGATGCATATAAGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCPSGWA*MHIRGC
Trigger: GCAGCCCCTTATATGCATCCATGCCCACCCAGATGG...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGCTATGTCCTGGGCTATaGAAAGGGCTTCGCTCATGG +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVLCPGL*KGLRSW
Trigger: CCATGAGCGAAGCCCTTTCCATAGCCCAGGACATAG...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTAGAGCCACTATGTCCTaGGCTATGGAAAGGGCTTCG +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGRATMS*AMERAS
Trigger: CGAAGCCCTTTCCATAGCCCAGGACATAGTGGCTCT...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CACACCTCCAGCTGTAACCTAACCAGAGCTCAGCAGGCCCCTTTGCTGCTCCTGGTTTGGTGGCCATCTTaGCCCCCAGCTCGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: HTSSCNLTRAQQAPLLLLVWWPS*PPARQR
Trigger: CCTCTGCCGAGCTGGGGGCCAAGATGGCCACCAAAC...CAGGAGCAGCAAAGGGGCCTGCTGAGCTCTGGTTAGGTTACAGCTGGAGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTCAGGAATGCGGTCCTTaGCATTCTCAGGGATATGGG +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCQECGP*HSQGYG
Trigger: CCCATATCCCTGAGAATGCCAAGGACCGCATTCCTG...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGCGTTCACCTACAACCTaGGCGTGTGTCCAGAGTTCA +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVRSPTT*ACVQSS
Trigger: TGAACTCTGGACACACGCCCAGGTTGTAGGTGAACG...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CACACCTCCAGCTGTAACCTAACCAGAGCTCAGCAGGCCCCTTTGCTGCTCCTGCACGTGGTAGGTCTGTaGTGGCTGGCAGCCCCCACT +
Preference number: 4 (lower is better)
Translates to: HTSSCNLTRAQQAPLLLLHVVGL*WLAAPT
Trigger: AGTGGGGGCTGCCAGCCACCACAGACCTACCACGTG...CAGGAGCAGCAAAGGGGCCTGCTGAGCTCTGGTTAGGTTACAGCTGGAGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTAGAGCAGCACGGACATaGGCAGAACCCATTCTCTCA +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCRAART*AEPILS
Trigger: TGAGAGAATGGGTTCTGCTCATGTCCGTGCTGCTCT...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTTGGCATCCGTGTGCATaGTCTTCTTCCAGATGTGCT +
Preference number: 4 (lower is better)
Translates to: PLLLLGTSGRATCRSALGWHPCA*SSSRCA
Trigger: AGCACATCTGGAAGAAGATCATGCACACGGATGCCA...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTCACTGCTGGTCAGAATaGCCATGCTCTTCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCHCWSE*PCSSWS
Trigger: GCTCCAAGAAGAGCATGGTCATTCTGACCAGCAGTG...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTCATGGCCATCTGGGTaGGCATGGATGCATATAAGG +
Preference number: 4 (lower is better)
Translates to: LLLLGTSGRATCRSALGVSWPSG*AWMHIR
Trigger: CCTTATATGCATCCATGCCCACCCAGATGGCCATGA...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CACACCTCCAGCTGTAACCTAACCAGAGCTCAGCAGGCCCCTTTGCTGCTCCTGGCACCGTGGGCACCTTaGCACGCAGAGCCACTATGT +
Preference number: 4 (lower is better)
Translates to: HTSSCNLTRAQQAPLLLLAPWAP*HAEPLC
Trigger: ACATAGTGGCTCTGCGTGCCAAGGTGCCCACGGTGC...CAGGAGCAGCAAAGGGGCCTGCTGAGCTCTGGTTAGGTTACAGCTGGAGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR TCA 90 bp CACACCTCCAGCTGTAACCTAACCAGAGCTCAGCAGGCCCCTTTGCTGCTCCTGTGGTCTGGCTGCTGGTaGGGACCACCACATCCTTGT +
Preference number: 4 (lower is better)
Translates to: HTSSCNLTRAQQAPLLLLWSGCW*GPPHPC
Trigger: ACAAGGATGTGGTGGTCCTCACCAGCAGCCAGACCA...CAGGAGCAGCAAAGGGGCCTGCTGAGCTCTGGTTAGGTTACAGCTGGAGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGCACAATTCCAGGAATaGGGTCCTTGGCATTCTCAG +
Preference number: 4 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCAQFQE*GPWHSQ
Trigger: CTGAGAATGCCAAGGACCGCATTCCTGGAATTGTGC...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CACACCTCCAGCTGTAACCTAACCAGAGCTCAGCAGGCCCCTTTGCTGCTCCTGCTTTCTCCCAGGACCTaGGGCAAGGTCCAGATCTCC +
Preference number: 4 (lower is better)
Translates to: HTSSCNLTRAQQAPLLLLLSPRT*GKVQIS
Trigger: GGAGATCTGGACCTTGCCCCAGGTCCTGGGAGAAAG...CAGGAGCAGCAAAGGGGCCTGCTGAGCTCTGGTTAGGTTACAGCTGGAGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CACACCTCCAGCTGTAACCTAACCAGAGCTCAGCAGGCCCCTTTGCTGCTCCTGAACACTAGCAAGCGGTaGTCCCCAGACACCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HTSSCNLTRAQQAPLLLLNTSKR*SPDTSW
Trigger: CCAGGAGGTGTCTGGGGACCACCGCTTGCTAGTGTT...CAGGAGCAGCAAAGGGGCCTGCTGAGCTCTGGTTAGGTTACAGCTGGAGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTCTTGTCCAGCAGAACTaGAGGGCCTTCATCAAAGAA +
Preference number: 4 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCLVQQN*RAFIKE
Trigger: TTCTTTGATGAAGGCCCTCCAGTTCTGCTGGACAAG...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CACACCTCCAGCTGTAACCTAACCAGAGCTCAGCAGGCCCCTTTGCTGCTCCTGCTCAGCTGGTTGTGCTaGAGCATCTCCTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: HTSSCNLTRAQQAPLLLLLSWLC*SISLAL
Trigger: CAGGGCCAAGGAGATGCTCCAGCACAACCAGCTGAG...CAGGAGCAGCAAAGGGGCCTGCTGAGCTCTGGTTAGGTTACAGCTGGAGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CCA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTCAAGCACGTTAGTGTaGAAGGAAAACTTGATCAGC +
Preference number: 4 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWSSTLV*KENLIS
Trigger: GCTGATCAAGTTTTCCTTCCACACTAACGTGCTTGA...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR GCA 90 bp CACACCTCCAGCTGTAACCTAACCAGAGCTCAGCAGGCCCCTTTGCTGCTCCTGATCATGGCATCCGTGTaGATGATCTTCTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: HTSSCNLTRAQQAPLLLLIMASV*MIFFQM
Trigger: CATCTGGAAGAAGATCATGCACACGGATGCCATGAT...CAGGAGCAGCAAAGGGGCCTGCTGAGCTCTGGTTAGGTTACAGCTGGAGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 90 bp AGGGCGCTGCGCAGAGTGAGGATGGCCAGGGCTTTCTCCAGGGCCTaGTCGGCCGGAGTCCCCACACAGGGCAGCACCCCGCTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: RALRRVRMARAFSRA*SAGVPTQGSTPLPS
Trigger: GGAGGGCAGCGGGGTGCTGCCCTGTGTGGGGACTCCGGCCGAGCAGGCCCTGGAGAAAGCCCTGGCCATCCTCACTCTGCGCAGCGCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 90 bp CCTCCGGCCGTGGGCTCCCCAATGACCGTGGCCCGCTGCAGGTCCTaGATGGTGTGTGCAAAGGCCTCGGCCGCAGAGCCACTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: PPAVGSPMTVARCRS*MVCAKASAAEPLVW
Trigger: CCACACCAGTGGCTCTGCGGCCGAGGCCTTTGCACACACCATGCAGGACCTGCAGCGGGCCACGGTCATTGGGGAGCCCACGGCCGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 90 bp GAGAGTGCGCCTCCGGCCGTGGGCTCCCCAATGACCGTGGCCCGCTaGAGGTCCTGCATGGTGTGTGCAAAGGCCTCGGCCGCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: ESAPPAVGSPMTVAR*RSCMVCAKASAAEP
Trigger: TGGCTCTGCGGCCGAGGCCTTTGCACACACCATGCAGGACCTGCAGCGGGCCACGGTCATTGGGGAGCCCACGGCCGGAGGCGCACTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp GAGACTCCAAGTCCACAGCTGTGCGGTAGGCGCCCTGGGCCAGCTTaGCCCGCAGGAGGGCACTGGTCTGCCCCACGACCTCTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: ETPSPQLCGRRPGPA*PAGGHWSAPRPLAE
Trigger: CTCGGCCAGAGGTCGTGGGGCAGACCAGTGCCCTCCTGCGGGCCAAGCTGGCCCAGGGCGCCTACCGCACAGCTGTGGACTTGGAGTCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 90 bp CCTCCTGGAGGCAGTGGACTACCCCTGGAAGGGCGCTGCGCAGAGTaGGGATGGCCAGGGCTTTCTCCAGGGCCTGCTCGGCCGGAGTCC +
Preference number: 5 (lower is better)
Translates to: PPGGSGLPLEGRCAE*GWPGLSPGPARPES
Trigger: GGACTCCGGCCGAGCAGGCCCTGGAGAAAGCCCTGGCCATCCTCACTCTGCGCAGCGCCCTTCCAGGGGTAGTCCACTGCCTCCAGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 90 bp GCGAGGCTGCCTTCGGGTGTGTCCAGCAGCGGCACCGTGCGGGTGTaGAGCAGGTTGCCCGCGGTGATCTCACCTACCAGTGTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: ARLPSGVSSSGTVRV*SRLPAVISPTSVAQ
Trigger: CTGGGCCACACTGGTAGGTGAGATCACCGCGGGCAACCTGCTGCACACCCGCACGGTGCCGCTGCTGGACACACCCGAAGGCAGCCTCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp CTGCAGCGTCGGGCGCGGGCCAAGAAGGAGTTTCTGTGGGCCCGATaGCTCGCACCAGGAGCCTGGGATCCTCAGACGCAGCCTGCAGGC +
Preference number: 5 (lower is better)
Translates to: LQRRARAKKEFLWAR*LAPGAWDPQTQPAG
Trigger: GCCTGCAGGCTGCGTCTGAGGATCCCAGGCTCCTGGTGCGAGCCATCGGGCCCACAGAAACTCCTTCTTGGCCCGCGCCCGACGCTGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp CAGGCCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCGGGTGTGCAGCAGGTaGCCCGCGGTGATCTCACCT +
Preference number: 5 (lower is better)
Translates to: QAPLLLLGTSGRATCRSARVCSR*PAVISP
Trigger: AGGTGAGATCACCGCGGGCAACCTGCTGCACACCCG...GGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 90 bp GTCCGCTCGCCCACCACGATGGCCCTGCGCATCTGCTTAAGGATGTaGGCGATGTCCTCGGCCACGCCCCTGGTCTGGCTGCTGGTGAGG +
Preference number: 5 (lower is better)
Translates to: VRSPTTMALRICLRM*AMSSATPLVWLLVR
Trigger: CCTCACCAGCAGCCAGACCAGGGGCGTGGCCGAGGACATCGCGCACATCCTTAAGCAGATGCGCAGGGCCATCGTGGTGGGCGAGCGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 90 bp TTGCCCGCGGTGATCTCACCTACCAGTGTGGCCCAGCCCAGCGACTaGATAAGGAAGGCGAACTCCTCCGCGGCCGTGGCGGTGCGGTGG +
Preference number: 5 (lower is better)
Translates to: LPAVISPTSVAQPSD*IRKANSSAAVAVRW
Trigger: CCACCGCACCGCCACGGCCGCGGAGGAGTTCGCCTTCCTTATGCAGTCGCTGGGCTGGGCCACACTGGTAGGTGAGATCACCGCGGGCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp CAGGCCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCTGCTGGAGCATCTCCTaGGCCCTGGCGAGAGCCTCT +
Preference number: 5 (lower is better)
Translates to: QAPLLLLGTSGRATCRSACWSIS*ALARAS
Trigger: AGAGGCTCTCGCCAGGGCCAAGGAGATGCTCCAGCA...GGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 90 bp ACGATGGCATCGGGCACCACTCCACCACCCAGCCAGGCCTCGCCGTaGTTGTCGATGAAGGTGAGGACCGGCACGGTGAGCGCGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TMASGTTPPPSQASP*LSMKVRTGTVSARL
Trigger: CAGCCTCGCGCTCACCGTGCCGGTCCTCACCTTCATCGACAATCACGGCGAGGCCTGGCTGGGTGGTGGAGTGGTGCCCGATGCCATCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 90 bp GGTAGATGCCCACAGAGAGTGCGCCTCCGGCCGTGGGCTCCCCAATaGCCGTGGCCCGCTGCAGGTCCTGCATGGTGTGTGCAAAGGCCT +
Preference number: 5 (lower is better)
Translates to: GRCPQRVRLRPWAPQ*PWPAAGPAWCVQRP
Trigger: AGGCCTTTGCACACACCATGCAGGACCTGCAGCGGGCCACGGTCATTGGGGAGCCCACGGCCGGAGGCGCACTCTCTGTGGGCATCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp AGTCTTCGGCTGCAGCGTCGGGCGCGGGCCAAGAAGGAGTTTCTGTaGGCCCGATGGCTCGCACCAGGAGCCTGGGATCCTCAGACGCAG +
Preference number: 5 (lower is better)
Translates to: SLRLQRRARAKKEFL*ARWLAPGAWDPQTQ
Trigger: CTGCGTCTGAGGATCCCAGGCTCCTGGTGCGAGCCATCGGGCCCACAGAAACTCCTTCTTGGCCCGCGCCCGACGCTGCAGCCGAAGACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGATGGCGGAGGCCCCTTaGCAGCCAGGCAAGCAGTTC +
Preference number: 5 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWMAEAP*QPGKQF
Trigger: GAACTGCTTGCCTGGCTGCAAAGGGGCCTCCGCCAT...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGGATGGCCCTCCAGGGTaGTGGCGCAGGTCCATGATG +
Preference number: 5 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWDGPPG*WRRSMM
Trigger: CATCATGGACCTGCGCCACAACCCTGGAGGGCCATC...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp CCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGCAGATACACCCCACGTaGGGTGCTGTAGCGTGGGCC +
Preference number: 5 (lower is better)
Translates to: PLCCSWEPQAGPPAGVPLQIHPT*GAVAWA
Trigger: GGCCCACGCTACAGCACCCAACGTGGGGTGTATCTG...CAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp CCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGAGCACCGTGGGCACCTaGGCACGCAGAGCCACTATG +
Preference number: 5 (lower is better)
Translates to: PLCCSWEPQAGPPAGVPLSTVGT*ARRATM
Trigger: CATAGTGGCTCTGCGTGCCAAGGTGCCCACGGTGCT...CAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 90 bp TTGCCGGATAGCCTCGTCCTCAGGCAACTCTGGGGCCACCCCTGGTaGGTCTTCGGCTGCAGCGTCGGGCGCGGGCCAAGAAGGAGTTTC +
Preference number: 5 (lower is better)
Translates to: LPDSLVLRQLWGHPW*VFGCSVGRGPRRSF
Trigger: GAAACTCCTTCTTGGCCCGCGCCCGACGCTGCAGCCGAAGACTCACCAGGGGTGGCCCCAGAGTTGCCTGAGGACGAGGCTATCCGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 90 bp GGCCCGATGGCTCGCACCAGGAGCCTGGGATCCTCAGACGCAGCCTaGAGGCCGGCATTGAGCTTGGTGACCAGATCTTCCTCGGAGACC +
Preference number: 5 (lower is better)
Translates to: GPMARTRSLGSSDAA*RPALSLVTRSSSET
Trigger: GGTCTCCGAGGAAGATCTGGTCACCAAGCTCAATGCCGGCCTGCAGGCTGCGTCTGAGGATCCCAGGCTCCTGGTGCGAGCCATCGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 90 bp GGGCTCCCCAATGACCGTGGCCCGCTGCAGGTCCTGCATGGTGTGTaGAAAGGCCTCGGCCGCAGAGCCACTGGTGTGGCTCATCAGGAT +
Preference number: 5 (lower is better)
Translates to: GLPNDRGPLQVLHGV*KGLGRRATGVAHQD
Trigger: ATCCTGATGAGCCACACCAGTGGCTCTGCGGCCGAGGCCTTTGCACACACCATGCAGGACCTGCAGCGGGCCACGGTCATTGGGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp CCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGAGCTGCCTTCCGCCCTaGTCCTTCTCAGCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: PLCCSWEPQAGPPAGVPLSCLPP*SFSAGG
Trigger: TCCACCAGCTGAGAAGGACAAGGGCGGAAGGCAGCT...CAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp CTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTCCCGCCTGCAGGCCGGCATaGAGCTTGGTGACCAGATCT +
Preference number: 5 (lower is better)
Translates to: LLGTSGRATCRSALGVCPACRPA*SLVTRS
Trigger: AGATCTGGTCACCAAGCTCAATGCCGGCCTGCAGGC...GGGACACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTAGTTTGGTGGCCATCTaGGCCCCCAGCTCGGCAGAG +
Preference number: 5 (lower is better)
Translates to: PLLLLGTSGRATCRSALGSLVAI*APSSAE
Trigger: CTCTGCCGAGCTGGGGGCCAAGATGGCCACCAAACT...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 90 bp GGATGTGCGCGATGTCCTCGGCCACGCCCCTGGTCTGGCTGCTGGTaGGGACCACCACATCCTTGTCGGCACCGTACCTTTCTCCCAGGA +
Preference number: 5 (lower is better)
Translates to: GCARCPRPRPWSGCW*GPPHPCRHRTFLPG
Trigger: TCCTGGGAGAAAGGTACGGTGCCGACAAGGATGTGGTGGTCCTCACCAGCAGCCAGACCAGGGGCGTGGCCGAGGACATCGCGCACATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 90 bp CGCAGAGCCACTGGTGTGGCTCATCAGGATGTAGAGGTCCTTGTGTaGGCCGTAGCGCTGGCCGGCGACCTGGGGCAAGGTCCACACCTC +
Preference number: 5 (lower is better)
Translates to: RRATGVAHQDVEVLV*AVALAGDLGQGPHL
Trigger: GAGGTGTGGACCTTGCCCCAGGTCGCCGGCCAGCGCTACGGCTCACACAAGGACCTCTACATCCTGATGAGCCACACCAGTGGCTCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp GGCCTGGCTCCTGCACAAAAGCTCCCTGGACTGTGTGCAAGGCCGTaGCCCTGCTCTGTGCAGCTGCCTTCCGCCCTTGTCCTTCTCAGC +
Preference number: 5 (lower is better)
Translates to: GLAPAQKLPGLCARP*PCSVQLPSALVLLS
Trigger: GCTGAGAAGGACAAGGGCGGAAGGCAGCTGCACAGAGCAGGGCCACGGCCTTGCACACAGTCCAGGGAGCTTTTGTGCAGGAGCCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp CCCTACAGGTGGTCCTGCAGGCCTGGGCTCCGCTTCACCCTCAGCTaGTTGTGCTGGAGCATCTCCTTGGCCCTGGCGAGAGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: PYRWSCRPGLRFTLS*LCWSISLALARASS
Trigger: AGAAGAGGCTCTCGCCAGGGCCAAGGAGATGCTCCAGCACAACCAGCTGAGGGTGAAGCGGAGCCCAGGCCTGCAGGACCACCTGTAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp GGGCTCTGCCTATGGGGCCCTTCCCTACAGGTGGTCCTGCAGGCCTaGGCTCCGCTTCACCCTCAGCTGGTTGTGCTGGAGCATCTCCTT +
Preference number: 5 (lower is better)
Translates to: GLCLWGPSLQVVLQA*APLHPQLVVLEHLL
Trigger: AAGGAGATGCTCCAGCACAACCAGCTGAGGGTGAAGCGGAGCCCAGGCCTGCAGGACCACCTGTAGGGAAGGGCCCCATAGGCAGAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTAGAGTCCACCAGTGCTaGCCGGATAGCCTCGTCCTC +
Preference number: 5 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCRVHQC*PDSLVL
Trigger: GAGGACGAGGCTATCCGGCAAGCACTGGTGGACTCT...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp TGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTCAAGGCCCCCAGGCTTaGGTGGAACTCCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: CCSWEPQAGPPAGVPLVCQGPQA*VELQHF
Trigger: GAAGTGCTGGAGTTCCACCAAAGCCTGGGGGCCTTG...ACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp CAGGCCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCCAGGAATGCGGTCCTaGGCATTCTCAGGGATATGG +
Preference number: 5 (lower is better)
Translates to: QAPLLLLGTSGRATCRSAPGMRS*AFSGIW
Trigger: CCATATCCCTGAGAATGCCAAGGACCGCATTCCTGG...GGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 90 bp CTCCTGTGCAGTGCCGGAGATCCAGCACTAAGGCGGAGGTGCCCATaGGATTCCCCCACACGTGGGCCACCAGGAACTCCCCCATCATGC +
Preference number: 5 (lower is better)
Translates to: LLCSAGDPALRRRCP*DSPTRGPPGTPPSC
Trigger: GCATGATGGGGGAGTTCCTGGTGGCCCACGTGTGGGGGAATCTCATGGGCACCTCCGCCTTAGTGCTGGATCTCCGGCACTGCACAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 90 bp TTGCCTGGCAGCACCGACACCTGGAACACAGAGTCCACCAGTGCTTaGCGGATAGCCTCGTCCTCAGGCAACTCTGGGGCCACCCCTGGT +
Preference number: 5 (lower is better)
Translates to: LPGSTDTWNTESTSA*RIASSSGNSGATPG
Trigger: ACCAGGGGTGGCCCCAGAGTTGCCTGAGGACGAGGCTATCCGGCAAGCACTGGTGGACTCTGTGTTCCAGGTGTCGGTGCTGCCAGGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 90 bp CACATTGCCTGGCAGCACCGACACCTGGAACACAGAGTCCACCAGTaGTTGCCGGATAGCCTCGTCCTCAGGCAACTCTGGGGCCACCCC +
Preference number: 5 (lower is better)
Translates to: HIAWQHRHLEHRVHQ*LPDSLVLRQLWGHP
Trigger: GGGGTGGCCCCAGAGTTGCCTGAGGACGAGGCTATCCGGCAAGCACTGGTGGACTCTGTGTTCCAGGTGTCGGTGCTGCCAGGCAATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 90 bp GCAGAGGATGGCCCTCCAGGGTTGTGGCGCAGGTCCATGATGAGGTaGTCCGTGTCCTGTAGCGGCTCCCACACCTGGCGCAGGACATAT +
Preference number: 5 (lower is better)
Translates to: AEDGPPGLWRRSMMR*SVSCSGSHTWRRTY
Trigger: ATATGTCCTGCGCCAGGTGTGGGAGCCGCTACAGGACACGGAGCACCTCATCATGGACCTGCGCCACAACCCTGGAGGGCCATCCTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 90 bp CACTCATGGCCATCTGGGTGGGCATGGATGCATATAAGGGGCTGCTaGCCACCTGGTAGATGCCCACAGAGAGTGCGCCTCCGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: HSWPSGWAWMHIRGC*PPGRCPQRVRLRPW
Trigger: CCACGGCCGGAGGCGCACTCTCTGTGGGCATCTACCAGGTGGGCAGCAGCCCCTTATATGCATCCATGCCCACCCAGATGGCCATGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 90 bp TGGCACTCATGGCCATCTGGGTGGGCATGGATGCATATAAGGGGCTaGTGCCCACCTGGTAGATGCCCACAGAGAGTGCGCCTCCGGCCG +
Preference number: 5 (lower is better)
Translates to: WHSWPSGWAWMHIRG*CPPGRCPQRVRLRP
Trigger: CGGCCGGAGGCGCACTCTCTGTGGGCATCTACCAGGTGGGCAGCAGCCCCTTATATGCATCCATGCCCACCCAGATGGCCATGAGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp AGATCCAGCACTAAGGCGGAGGTGCCCATGAGATTCCCCCACACGTaGGCCACCAGGAACTCCCCCATCATGCTCAGCACCTCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RSSTKAEVPMRFPHT*ATRNSPIMLSTSWP
Trigger: GGGCCAGGAGGTGCTGAGCATGATGGGGGAGTTCCTGGTGGCCCACGTGTGGGGGAATCTCATGGGCACCTCCGCCTTAGTGCTGGATCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp AGGTCCATGATGAGGTGCTCCGTGTCCTGTAGCGGCTCCCACACCTaGCGCAGGACATATGGGGCCAACACACCCAGGACGGAGGCGTCA +
Preference number: 5 (lower is better)
Translates to: RSMMRCSVSCSGSHT*RRTYGANTPRTEAS
Trigger: TGACGCCTCCGTCCTGGGTGTGTTGGCCCCATATGTCCTGCGCCAGGTGTGGGAGCCGCTACAGGACACGGAGCACCTCATCATGGACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp CGCAGCCGTGTCCACCAGCTGTTGCCATACCAGCCGCACCAGCTGTaGCCCCACGGCCTTCACTGTCTCCAGTTCAGCCATGGCGTCAAA +
Preference number: 5 (lower is better)
Translates to: RSRVHQLLPYQPHQL*PHGLHCLQFSHGVK
Trigger: TTTGACGCCATGGCTGAACTGGAGACAGTGAAGGCCGTGGGGCCACAGCTGGTGCGGCTGGTATGGCAACAGCTGGTGGACACGGCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp GGGGCTCTGCCTCAAAGAAGTAGGAGCAGAGCAGCGGGATGGCCGTaGAGTAGCTGCCAGGGTTGTAGCGCAGGTCGATCACCAGCGCAG +
Preference number: 5 (lower is better)
Translates to: GALPQRSRSRAAGWP*SSCQGCSAGRSPAQ
Trigger: CTGCGCTGGTGATCGACCTGCGCTACAACCCTGGCAGCTACTCCACGGCCATCCCGCTGCTCTGCTCCTACTTCTTTGAGGCAGAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp GCTGGCGGGGCTCTGCCTCAAAGAAGTAGGAGCAGAGCAGCGGGATaGCCGTGGAGTAGCTGCCAGGGTTGTAGCGCAGGTCGATCACCA +
Preference number: 5 (lower is better)
Translates to: AGGALPQRSRSRAAG*PWSSCQGCSAGRSP
Trigger: TGGTGATCGACCTGCGCTACAACCCTGGCAGCTACTCCACGGCCATCCCGCTGCTCTGCTCCTACTTCTTTGAGGCAGAGCCCCGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp GCTCCACACCAGCCAGGTCCCAGGCCTTGCCTGTGGTGGCACTCATaGCCATCTGGGTGGGCATGGATGCATATAAGGGGCTGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: APHQPGPRPCLWWHS*PSGWAWMHIRGCCP
Trigger: TGGGCAGCAGCCCCTTATATGCATCCATGCCCACCCAGATGGCCATGAGTGCCACCACAGGCAAGGCCTGGGACCTGGCTGGTGTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp TATCAGCCACCAGCTTCCCGGCCGTCTGCAGCACCGTGGGCACCTTaGCACGCAGAGCCACTATGTCCTGGGCTATGGAAAGGGCTTCGC +
Preference number: 5 (lower is better)
Translates to: YQPPASRPSAAPWAP*HAEPLCPGLWKGLR
Trigger: GCGAAGCCCTTTCCATAGCCCAGGACATAGTGGCTCTGCGTGCCAAGGTGCCCACGGTGCTGCAGACGGCCGGGAAGCTGGTGGCTGATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp GGTCAGCCCCCAGGATCTCGGCTAGGGCCACTTCTGAGGTCACCCTaGAGTAGCGGCTCTGCAGACCGCTCAGTTTGGTGGCCATCTTGG +
Preference number: 5 (lower is better)
Translates to: GQPPGSRLGPLLRSP*SSGSADRSVWWPSW
Trigger: CCAAGATGGCCACCAAACTGAGCGGTCTGCAGAGCCGCTACTCCAGGGTGACCTCAGAAGTGGCCCTAGCCGAGATCCTGGGGGCTGACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGAGGCCGGCATTGAGCTaGGTGACCAGATCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: LLLLGTSGRATCRSALGVRPALS*VTRSSS
Trigger: CGAGGAAGATCTGGTCACCAAGCTCAATGCCGGCCT...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp CCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGGGCAGCACCTCTGTCTaGAACAGGGCCTCAATAAGG +
Preference number: 5 (lower is better)
Translates to: PFAAPGNLRPGHLQECPWGSTSV*NRASIR
Trigger: CCTTATTGAGGCCCTGTTCAAGACAGAGGTGCTGCC...CCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp CCCCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGGGGCCACCGATGTaGAACCTCATGTCGATGATC +
Preference number: 5 (lower is better)
Translates to: PLCCSWEPQAGPPAGVPLVGPPM*NLMSMI
Trigger: GATCATCGACATGAGGTTCAACATCGGTGGCCCCAC...CAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp CTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTCCCTTCACCCTCAGCTGGTaGTGCTGGAGCATCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LLGTSGRATCRSALGVCPFTLSW*CWSISL
Trigger: CAAGGAGATGCTCCAGCACAACCAGCTGAGGGTGAA...GGGACACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp TTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTCCTGCAGGAGTGCCCTaGGTGTGTGTCCCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: FAAPGNLRPGHLQECPWCPAGVP*VCVPEV
Trigger: AACCTCTGGGACACACACCAAGGGCACTCCTGCAGG...ACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 90 bp CCTCAAAGAAGTAGGAGCAGAGCAGCGGGATGGCCGTGGAGTAGCTaGCAGGGTTGTAGCGCAGGTCGATCACCAGCGCAGCCGTGTCCA +
Preference number: 5 (lower is better)
Translates to: PQRSRSRAAGWPWSS*QGCSAGRSPAQPCP
Trigger: TGGACACGGCTGCGCTGGTGATCGACCTGCGCTACAACCCTGGCAGCTACTCCACGGCCATCCCGCTGCTCTGCTCCTACTTCTTTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp GGCGAGGATCGTTCAGGGAGCTCTGCACCCCGGCTGTCAGCACACTaGCCAGCGTCTGCGGGTCTGAGATGCTCAGAATCTCATGGCTCT +
Preference number: 5 (lower is better)
Translates to: GEDRSGSSAPRLSAH*PASAGLRCSESHGS
Trigger: AGAGCCATGAGATTCTGAGCATCTCAGACCCGCAGACGCTGGCCAGTGTGCTGACAGCCGGGGTGCAGAGCTCCCTGAACGATCCTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp AGGACCACCACATCCTTGTCGGCACCGTACCTTTCTCCCAGGACCTaGGGCAAGGTCCAGATCTCCGTGGTGGTGTTGGAGGGGCGGTTG +
Preference number: 5 (lower is better)
Translates to: RTTTSLSAPYLSPRT*GKVQISVVVLEGRL
Trigger: CAACCGCCCCTCCAACACCACCACGGAGATCTGGACCTTGCCCCAGGTCCTGGGAGAAAGGTACGGTGCCGACAAGGATGTGGTGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp GTCTGCAGCACCGTGGGCACCTTGGCACGCAGAGCCACTATGTCCTaGGCTATGGAAAGGGCTTCGCTCATGGGCACAGTGATGTCGGGC +
Preference number: 5 (lower is better)
Translates to: VCSTVGTLARRATMS*AMERASLMGTVMSG
Trigger: GCCCGACATCACTGTGCCCATGAGCGAAGCCCTTTCCATAGCCCAGGACATAGTGGCTCTGCGTGCCAAGGTGCCCACGGTGCTGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp GATAGTGAGGTAGAGGTTGGTGTCATCCACGTGGTAGGTCTGTGGTaGCTGGCAGCCCCCACTGGTCACCTCCCCAATGACCAGGGCCCG +
Preference number: 5 (lower is better)
Translates to: DSEVEVGVIHVVGLW*LAAPTGHLPNDQGP
Trigger: CGGGCCCTGGTCATTGGGGAGGTGACCAGTGGGGGCTGCCAGCCACCACAGACCTACCACGTGGATGACACCAACCTCTACCTCACTATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp TTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTTATCCAAGAGGACCTaGGCCATGTCCAGCACCAGG +
Preference number: 5 (lower is better)
Translates to: LLLLGTSGRATCRSALGVLSKRT*AMSSTR
Trigger: CCTGGTGCTGGACATGGCCAAGGTCCTCTTGGATAA...CACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp CTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTGTGTGTCCCAGAATCTCATGGCTCTaGATGGCCTGCTGGATGGCT +
Preference number: 5 (lower is better)
Translates to: LLGTSGRATCRSALGVCPRISWL*MACWMA
Trigger: AGCCATCCAGCAGGCCATCAAGAGCCATGAGATTCT...GGGACACACACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp CCTTTGCTGCTCCTGGGAACCTCAGGCCGGGCCACCTGCAGGAGTGCCCTTGGTAGGACCACCACATCCTaGTCGGCACCGTACCTTTCT +
Preference number: 5 (lower is better)
Translates to: PLLLLGTSGRATCRSALGRTTTS*SAPYLS
Trigger: AGAAAGGTACGGTGCCGACAAGGATGTGGTGGTCCT...ACCAAGGGCACTCCTGCAGGTGGCCCGGCCTGAGGTTCCCAGGAGCAGCAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 90 bp TTCAGGGAGCTCTGCACCCCGGCTGTCAGCACACTGGCCAGCGTCTaGGGGTCTGAGATGCTCAGAATCTCATGGCTCTTGATGGCCTGC +
Preference number: 5 (lower is better)
Translates to: FRELCTPAVSTLASV*GSEMLRISWLLMAC
Trigger: GCAGGCCATCAAGAGCCATGAGATTCTGAGCATCTCAGACCCGCAGACGCTGGCCAGTGTGCTGACAGCCGGGGTGCAGAGCTCCCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp ATCTGCTTAAGGATGTGCGCGATGTCCTCGGCCACGCCCCTGGTCTaGCTGCTGGTGAGGACCACCACATCCTTGTCGGCACCGTACCTT +
Preference number: 5 (lower is better)
Translates to: ICLRMCAMSSATPLV*LLVRTTTSLSAPYL
Trigger: AAGGTACGGTGCCGACAAGGATGTGGTGGTCCTCACCAGCAGCCAGACCAGGGGCGTGGCCGAGGACATCGCGCACATCCTTAAGCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp CTGAGGTCACCCTGGAGTAGCGGCTCTGCAGACCGCTCAGTTTGGTaGCCATCTTGGCCCCCAGCTCGGCAGAGGCATAGTTATCAGCCA +
Preference number: 5 (lower is better)
Translates to: LRSPWSSGSADRSVW*PSWPPARQRHSYQP
Trigger: TGGCTGATAACTATGCCTCTGCCGAGCTGGGGGCCAAGATGGCCACCAAACTGAGCGGTCTGCAGAGCCGCTACTCCAGGGTGACCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp AATGCGGTCCTTGGCATTCTCAGGGATATGGGCTGCCTTCAGGTGTaGGTCTCCGGAGAGCATCTGCAGGTCAGCCCCCAGGATCTCGGC +
Preference number: 5 (lower is better)
Translates to: NAVLGILRDMGCLQV*VSGEHLQVSPQDLG
Trigger: GCCGAGATCCTGGGGGCTGACCTGCAGATGCTCTCCGGAGACCCACACCTGAAGGCAGCCCATATCCCTGAGAATGCCAAGGACCGCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp CACACCTCCAGCTGTAACCTAACCAGAGCTCAGCAGGCCCCTTTGCTGCTCCTGTGCAGACCGCTCAGTTaGGTGGCCATCTTGGCCCCC +
Preference number: 5 (lower is better)
Translates to: HTSSCNLTRAQQAPLLLLCRPLS*VAILAP
Trigger: GGGGGCCAAGATGGCCACCAAACTGAGCGGTCTGCA...CAGGAGCAGCAAAGGGGCCTGCTGAGCTCTGGTTAGGTTACAGCTGGAGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 90 bp TGGCCAGCGTCTGCGGGTCTGAGATGCTCAGAATCTCATGGCTCTTaGTGGCCTGCTGGATGGCTTCCTGCATGCCCAGCAGGTTCTCCG +
Preference number: 5 (lower is better)
Translates to: WPASAGLRCSESHGS*WPAGWLPACPAGSP
Trigger: CGGAGAACCTGCTGGGCATGCAGGAAGCCATCCAGCAGGCCATCAAGAGCCATGAGATTCTGAGCATCTCAGACCCGCAGACGCTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp AGCACACTGGCCAGCGTCTGCGGGTCTGAGATGCTCAGAATCTCATaGCTCTTGATGGCCTGCTGGATGGCTTCCTGCATGCCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: STLASVCGSEMLRIS*LLMACWMASCMPSR
Trigger: CCTGCTGGGCATGCAGGAAGCCATCCAGCAGGCCATCAAGAGCCATGAGATTCTGAGCATCTCAGACCCGCAGACGCTGGCCAGTGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp GGAGGCGTCAGCAAAACTATCGAAGCGCAGGTAGCCCACATTGCCTaGCAGCACCGACACCTGGAACACAGAGTCCACCAGTGCTTGCCG +
Preference number: 5 (lower is better)
Translates to: GGVSKTIEAQVAHIA*QHRHLEHRVHQCLP
Trigger: CGGCAAGCACTGGTGGACTCTGTGTTCCAGGTGTCGGTGCTGCCAGGCAATGTGGGCTACCTGCGCTTCGATAGTTTTGCTGACGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp AGGCATAGTTATCAGCCACCAGCTTCCCGGCCGTCTGCAGCACCGTaGGCACCTTGGCACGCAGAGCCACTATGTCCTGGGCTATGGAAA +
Preference number: 5 (lower is better)
Translates to: RHSYQPPASRPSAAP*APWHAEPLCPGLWK
Trigger: TTTCCATAGCCCAGGACATAGTGGCTCTGCGTGCCAAGGTGCCCACGGTGCTGCAGACGGCCGGGAAGCTGGTGGCTGATAACTATGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp CTTCTGAGGTCACCCTGGAGTAGCGGCTCTGCAGACCGCTCAGTTTaGTGGCCATCTTGGCCCCCAGCTCGGCAGAGGCATAGTTATCAG +
Preference number: 5 (lower is better)
Translates to: LLRSPWSSGSADRSV*WPSWPPARQRHSYQ
Trigger: CTGATAACTATGCCTCTGCCGAGCTGGGGGCCAAGATGGCCACCAAACTGAGCGGTCTGCAGAGCCGCTACTCCAGGGTGACCTCAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS-3UTR CAA 90 bp CACACCTCCAGCTGTAACCTAACCAGAGCTCAGCAGGCCCCTTTGCTGCTCCTGTGTCCAGCACCAGGCTaGGCTGGAACAGGTGTGTGG +
Preference number: 5 (lower is better)
Translates to: HTSSCNLTRAQQAPLLLLCPAPG*AGTGVW
Trigger: CCACACACCTGTTCCAGCCAAGCCTGGTGCTGGACA...CAGGAGCAGCAAAGGGGCCTGCTGAGCTCTGGTTAGGTTACAGCTGGAGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 90 bp GGACGGAGGCGTCAGCAAAACTATCGAAGCGCAGGTAGCCCACATTaGCTGGCAGCACCGACACCTGGAACACAGAGTCCACCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: GRRRQQNYRSAGSPH*LAAPTPGTQSPPVL
Trigger: AAGCACTGGTGGACTCTGTGTTCCAGGTGTCGGTGCTGCCAGGCAATGTGGGCTACCTGCGCTTCGATAGTTTTGCTGACGCCTCCGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 90 bp CACAATTCCAGGAATGCGGTCCTTGGCATTCTCAGGGATATGGGCTaGCTTCAGGTGTGGGTCTCCGGAGAGCATCTGCAGGTCAGCCCC +
Preference number: 5 (lower is better)
Translates to: HNSRNAVLGILRDMG*LQVWVSGEHLQVSP
Trigger: GGGGCTGACCTGCAGATGCTCTCCGGAGACCCACACCTGAAGGCAGCCCATATCCCTGAGAATGCCAAGGACCGCATTCCTGGAATTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp GGAGGGGCGGTTGTAGATAGTGTCCACGTGCAGGATGGTGTTCCCTaGGTGCAGGTAGGAGATGATGTAGGGAATGCCAGAGACCTGGCC +
Preference number: 5 (lower is better)
Translates to: GGAVVDSVHVQDGVP*VQVGDDVGNARDLA
Trigger: GGCCAGGTCTCTGGCATTCCCTACATCATCTCCTACCTGCACCCAGGGAACACCATCCTGCACGTGGACACTATCTACAACCGCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 90 bp ATGGGCACAATTCCAGGAATGCGGTCCTTGGCATTCTCAGGGATATaGGCTGCCTTCAGGTGTGGGTCTCCGGAGAGCATCTGCAGGTCA +
Preference number: 5 (lower is better)
Translates to: MGTIPGMRSLAFSGI*AAFRCGSPESICRS
Trigger: TGACCTGCAGATGCTCTCCGGAGACCCACACCTGAAGGCAGCCCATATCCCTGAGAATGCCAAGGACCGCATTCCTGGAATTGTGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 90 bp GGGCCACCGATGTTGAACCTCATGTCGATGATCATGGCATCCGTGTaGATGATCTTCTTCCAGATGTGCTCCACCAGCAGCCTGGAGACC +
Preference number: 5 (lower is better)
Translates to: GPPMLNLMSMIMASV*MIFFQMCSTSSLET
Trigger: GGTCTCCAGGCTGCTGGTGGAGCACATCTGGAAGAAGATCATGCACACGGATGCCATGATCATCGACATGAGGTTCAACATCGGTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 90 bp AGCCATAGCGTTCACCTACAACCTGGGCGTGTGTCCAGAGTTCACTaGCAGAGTCATCAGGCCGGCTGTAGATCTTGTCCAGCAGAACTG +
Preference number: 5 (lower is better)
Translates to: SHSVHLQPGRVSRVH*QSHQAGCRSCPAEL
Trigger: CAGTTCTGCTGGACAAGATCTACAGCCGGCCTGATGACTCTGTCAGTGAACTCTGGACACACGCCCAGGTTGTAGGTGAACGCTATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp CCTCCGGCCGTGGGCTCCCCAATGACCGTGGCCCGCTaGAGGTCCTGCATGGTGTGTGCAAAGGCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: PPAVGSPMTVAR*RSCMVCAKASA
Trigger: GGCCGAGGCCTTTGCACACACCATGCAGGACCTGCAGCGGGCCACGGTCATTGGGGAGCCCACGGCCGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp GGCCCGCAGGAGGGCACTGGTCTGCCCCACGACCTCTaGCCGAGCATAGTGGGCCTCCAGCAGGTGCCCTGT +
Preference number: 6 (lower is better)
Translates to: GPQEGTGLPHDL*PSIVGLQQVPC
Trigger: ACAGGGCACCTGCTGGAGGCCCACTATGCTCGGCCAGAGGTCGTGGGGCAGACCAGTGCCCTCCTGCGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CAA 90 bp CCTTCGGGTGTGTCCAGCAGCGGCACCGTGCGGGTGTGCAGCAGGTaGCCCGCGGTGATCTCACCTACCAGTGTGGCCCAGCCCAGCGAC +
Preference number: 6 (lower is better)
Translates to: PSGVSSSGTVRVCSR*PAVISPTSVAQPSD
Trigger: GTCGCTGGGCTGGGCCACACTGGTAGGTGAGATCACCGCGGGCAACCTGCTGCACACCCGCACGGTGCCGCTGCTGGACACACCCGAAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 72 bp GCGGCACCGTGCGGGTGTGCAGCAGGTTGCCCGCGGTaGTCTCACCTACCAGTGTGGCCCAGCCCAGCGACT +
Preference number: 6 (lower is better)
Translates to: AAPCGCAAGCPR*SHLPVWPSPAT
Trigger: AGTCGCTGGGCTGGGCCACACTGGTAGGTGAGATCACCGCGGGCAACCTGCTGCACACCCGCACGGTGCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 72 bp CCACAGAGAGTGCGCCTCCGGCCGTGGGCTCCCCAATaGCCGTGGCCCGCTGCAGGTCCTGCATGGTGTGTG +
Preference number: 6 (lower is better)
Translates to: PQRVRLRPWAPQ*PWPAAGPAWCV
Trigger: CACACACCATGCAGGACCTGCAGCGGGCCACGGTCATTGGGGAGCCCACGGCCGGAGGCGCACTCTCTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp TCCCCCACACGTGGGCCACCAGGAACTCCCCCATCATaGTCAGCACCTCCTGGCCCGGGACGCTGTCCACCC +
Preference number: 6 (lower is better)
Translates to: SPTRGPPGTPPS*SAPPGPGRCPP
Trigger: GGGTGGACAGCGTCCCGGGCCAGGAGGTGCTGAGCATGATGGGGGAGTTCCTGGTGGCCCACGTGTGGGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp CCTGGGCTTTGTCCAGGGCCTCCTCGGCCAGCACGATaGCATCGGGCACCACTCCACCACCCAGCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: PGLCPGPPRPAR*HRAPLHHPARP
Trigger: AGGCCTGGCTGGGTGGTGGAGTGGTGCCCGATGCCATCGTGCTGGCCGAGGAGGCCCTGGACAAAGCCCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 72 bp CGAACTCCTCCGCGGCCGTGGCGGTGCGGTGGCTGGTaGGCAGATACACCCCACGTTGGGTGCTGTAGCGTG +
Preference number: 6 (lower is better)
Translates to: RTPPRPWRCGGW*ADTPHVGCCSV
Trigger: CACGCTACAGCACCCAACGTGGGGTGTATCTGCTCACCAGCCACCGCACCGCCACGGCCGCGGAGGAGTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp GGCCCTCCAGGGTTGTGGCGCAGGTCCATGATGAGGTaGTCCGTGTCCTGTAGCGGCTCCCACACCTGGCGC +
Preference number: 6 (lower is better)
Translates to: GPPGLWRRSMMR*SVSCSGSHTWR
Trigger: GCGCCAGGTGTGGGAGCCGCTACAGGACACGGAGCACCTCATCATGGACCTGCGCCACAACCCTGGAGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp GTGGGCTCCCCAATGACCGTGGCCCGCTGCAGGTCCTaGATGGTGTGTGCAAAGGCCTCGGCCGCAGAGCCA +
Preference number: 6 (lower is better)
Translates to: VGSPMTVARCRS*MVCAKASAAEP
Trigger: TGGCTCTGCGGCCGAGGCCTTTGCACACACCATGCAGGACCTGCAGCGGGCCACGGTCATTGGGGAGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp CGGGCGCGGGCCAAGAAGGAGTTTCTGTGGGCCCGATaGCTCGCACCAGGAGCCTGGGATCCTCAGACGCAG +
Preference number: 6 (lower is better)
Translates to: RARAKKEFLWAR*LAPGAWDPQTQ
Trigger: CTGCGTCTGAGGATCCCAGGCTCCTGGTGCGAGCCATCGGGCCCACAGAAACTCCTTCTTGGCCCGCGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp CTGCAGCGTCGGGCGCGGGCCAAGAAGGAGTTTCTGTaGGCCCGATGGCTCGCACCAGGAGCCTGGGATCCT +
Preference number: 6 (lower is better)
Translates to: LQRRARAKKEFL*ARWLAPGAWDP
Trigger: AGGATCCCAGGCTCCTGGTGCGAGCCATCGGGCCCACAGAAACTCCTTCTTGGCCCGCGCCCGACGCTGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp AGGAAGGCGAACTCCTCCGCGGCCGTGGCGGTGCGGTaGCTGGTGAGCAGATACACCCCACGTTGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: RKANSSAAVAVR*LVSRYTPRWVL
Trigger: CAGCACCCAACGTGGGGTGTATCTGCTCACCAGCCACCGCACCGCCACGGCCGCGGAGGAGTTCGCCTTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CAA 72 bp GTGTCCAGCAGCGGCACCGTGCGGGTGTGCAGCAGGTaGCCCGCGGTGATCTCACCTACCAGTGTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: VSSSGTVRVCSR*PAVISPTSVAQ
Trigger: CTGGGCCACACTGGTAGGTGAGATCACCGCGGGCAACCTGCTGCACACCCGCACGGTGCCGCTGCTGGACAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 72 bp GTGGGGGAGGCTCGGGGGTGCTGGGCTCATAGGAGATaGCCAGGCGAGGATCGTTCAGGGAGCTCTGCACCC +
Preference number: 6 (lower is better)
Translates to: VGEARGCWAHRR*PGEDRSGSSAP
Trigger: GGGTGCAGAGCTCCCTGAACGATCCTCGCCTGGTCATCTCCTATGAGCCCAGCACCCCCGAGCCTCCCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 72 bp TCGGGCACCACTCCACCACCCAGCCAGGCCTCGCCGTaGTTGTCGATGAAGGTGAGGACCGGCACGGTGAGC +
Preference number: 6 (lower is better)
Translates to: SGTTPPPSQASP*LSMKVRTGTVS
Trigger: GCTCACCGTGCCGGTCCTCACCTTCATCGACAATCACGGCGAGGCCTGGCTGGGTGGTGGAGTGGTGCCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp CCCACCACGATGGCCCTGCGCATCTGCTTAAGGATGTaGGCGATGTCCTCGGCCACGCCCCTGGTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: PTTMALRICLRM*AMSSATPLVWL
Trigger: CAGCCAGACCAGGGGCGTGGCCGAGGACATCGCGCACATCCTTAAGCAGATGCGCAGGGCCATCGTGGTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp CCTTCGGGTGTGTCCAGCAGCGGCACCGTGCGGGTGTaGAGCAGGTTGCCCGCGGTGATCTCACCTACCAGT +
Preference number: 6 (lower is better)
Translates to: PSGVSSSGTVRV*SRLPAVISPTS
Trigger: ACTGGTAGGTGAGATCACCGCGGGCAACCTGCTGCACACCCGCACGGTGCCGCTGCTGGACACACCCGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CAA 90 bp TCGGCCACGCCCCTGGTCTGGCTGCTGGTGAGGACCACCACATCCTaGTCGGCACCGTACCTTTCTCCCAGGACCTGGGGCAAGGTCCAG +
Preference number: 6 (lower is better)
Translates to: SATPLVWLLVRTTTS*SAPYLSPRTWGKVQ
Trigger: CTGGACCTTGCCCCAGGTCCTGGGAGAAAGGTACGGTGCCGACAAGGATGTGGTGGTCCTCACCAGCAGCCAGACCAGGGGCGTGGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp TCGGAGACCACCGTGGAGAAGTCCATGCTGGCCAAGTaGTGCAGCAGGGTGGGCACACGGTCCACCAGCGTG +
Preference number: 6 (lower is better)
Translates to: SETTVEKSMLAK*CSRVGTRSTSV
Trigger: CACGCTGGTGGACCGTGTGCCCACCCTGCTGCAGCACTTGGCCAGCATGGACTTCTCCACGGTGGTCTCCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp TGGATGCATATAAGGGGCTGCTGCCCACCTGGTAGATaGCCACAGAGAGTGCGCCTCCGGCCGTGGGCTCCC +
Preference number: 6 (lower is better)
Translates to: WMHIRGCCPPGR*PQRVRLRPWAP
Trigger: GGGAGCCCACGGCCGGAGGCGCACTCTCTGTGGGCATCTACCAGGTGGGCAGCAGCCCCTTATATGCATCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp CTGGAGCATCTCCTTGGCCCTGGCGAGAGCCTCTTCTaGAGGGACAACCACATGGGGTGTCACCCCCACCCC +
Preference number: 6 (lower is better)
Translates to: LEHLLGPGESLF*RDNHMGCHPHP
Trigger: GGGGTGGGGGTGACACCCCATGTGGTTGTCCCTGCAGAAGAGGCTCTCGCCAGGGCCAAGGAGATGCTCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp AGGATGTGCGCGATGTCCTCGGCCACGCCCCTGGTCTaGCTGCTGGTGAGGACCACCACATCCTTGTCGGCA +
Preference number: 6 (lower is better)
Translates to: RMCAMSSATPLV*LLVRTTTSLSA
Trigger: TGCCGACAAGGATGTGGTGGTCCTCACCAGCAGCCAGACCAGGGGCGTGGCCGAGGACATCGCGCACATCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp GGGGGTGCTTCCTCTACCACCAGCTCGCCAGGGCTGTaGAACACTAGCAAGCGGTGGTCCCCAGACACCTCC +
Preference number: 6 (lower is better)
Translates to: GGASSTTSSPGL*NTSKRWSPDTS
Trigger: GGAGGTGTCTGGGGACCACCGCTTGCTAGTGTTCCACAGCCCTGGCGAGCTGGTGGTAGAGGAAGCACCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp GTGGCCCCACGGCCTTCACTGTCTCCAGTTCAGCCATaGCGTCAAAACGCAGGTAGCCCAGCTGGCCGGGCA +
Preference number: 6 (lower is better)
Translates to: VAPRPSLSPVQP*RQNAGSPAGRA
Trigger: TGCCCGGCCAGCTGGGCTACCTGCGTTTTGACGCCATGGCTGAACTGGAGACAGTGAAGGCCGTGGGGCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp TATCAGCCACCAGCTTCCCGGCCGTCTGCAGCACCGTaGGCACCTTGGCACGCAGAGCCACTATGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: YQPPASRPSAAP*APWHAEPLCPG
Trigger: CCCAGGACATAGTGGCTCTGCGTGCCAAGGTGCCCACGGTGCTGCAGACGGCCGGGAAGCTGGTGGCTGATA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp CTATGGGGCCCTTCCCTACAGGTGGTCCTGCAGGCCTaGGCTCCGCTTCACCCTCAGCTGGTTGTGCTGGAG +
Preference number: 6 (lower is better)
Translates to: LWGPSLQVVLQA*APLHPQLVVLE
Trigger: CTCCAGCACAACCAGCTGAGGGTGAAGCGGAGCCCAGGCCTGCAGGACCACCTGTAGGGAAGGGCCCCATAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CAA 72 bp CCCCTGGTCTGGCTGCTGGTGAGGACCACCACATCCTaGTCGGCACCGTACCTTTCTCCCAGGACCTGGGGC +
Preference number: 6 (lower is better)
Translates to: PLVWLLVRTTTS*SAPYLSPRTWG
Trigger: GCCCCAGGTCCTGGGAGAAAGGTACGGTGCCGACAAGGATGTGGTGGTCCTCACCAGCAGCCAGACCAGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CAA 90 bp GTTGTAGCGCAGGTCGATCACCAGCGCAGCCGTGTCCACCAGCTGTaGCCATACCAGCCGCACCAGCTGTGGCCCCACGGCCTTCACTGT +
Preference number: 6 (lower is better)
Translates to: VVAQVDHQRSRVHQL*PYQPHQLWPHGLHC
Trigger: ACAGTGAAGGCCGTGGGGCCACAGCTGGTGCGGCTGGTATGGCAACAGCTGGTGGACACGGCTGCGCTGGTGATCGACCTGCGCTACAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 72 bp AGTGCCGGAGATCCAGCACTAAGGCGGAGGTGCCCATaGGATTCCCCCACACGTGGGCCACCAGGAACTCCC +
Preference number: 6 (lower is better)
Translates to: SAGDPALRRRCP*DSPTRGPPGTP
Trigger: GGGAGTTCCTGGTGGCCCACGTGTGGGGGAATCTCATGGGCACCTCCGCCTTAGTGCTGGATCTCCGGCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp GACTGTGTGCAAGGCCGTGGCCCTGCTCTGTGCAGCTaGCTTCCGCCCTTGTCCTTCTCAGCTGGTGGACAG +
Preference number: 6 (lower is better)
Translates to: DCVQGRGPALCS*LPPLSFSAGGQ
Trigger: CTGTCCACCAGCTGAGAAGGACAAGGGCGGAAGGCAGCTGCACAGAGCAGGGCCACGGCCTTGCACACAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp GCTCGCACCAGGAGCCTGGGATCCTCAGACGCAGCCTaGAGGCCGGCATTGAGCTTGGTGACCAGATCTTCC +
Preference number: 6 (lower is better)
Translates to: ARTRSLGSSDAA*RPALSLVTRSS
Trigger: GGAAGATCTGGTCACCAAGCTCAATGCCGGCCTGCAGGCTGCGTCTGAGGATCCCAGGCTCCTGGTGCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp AGTAGGAGCAGAGCAGCGGGATGGCCGTGGAGTAGCTaGCAGGGTTGTAGCGCAGGTCGATCACCAGCGCAG +
Preference number: 6 (lower is better)
Translates to: SRSRAAGWPWSS*QGCSAGRSPAQ
Trigger: CTGCGCTGGTGATCGACCTGCGCTACAACCCTGGCAGCTACTCCACGGCCATCCCGCTGCTCTGCTCCTACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp GTGTGTGTCCCAGAGGTTCTGTCTGCCCTGGGGCTCTaGCTATGGGGCCCTTCCCTACAGGTGGTCCTGCAG +
Preference number: 6 (lower is better)
Translates to: VCVPEVLSALGL*LWGPSLQVVLQ
Trigger: CTGCAGGACCACCTGTAGGGAAGGGCCCCATAGGCAGAGCCCCAGGGCAGACAGAACCTCTGGGACACACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp CCTGCACAAAAGCTCCCTGGACTGTGTGCAAGGCCGTaGCCCTGCTCTGTGCAGCTGCCTTCCGCCCTTGTC +
Preference number: 6 (lower is better)
Translates to: PAQKLPGLCARP*PCSVQLPSALV
Trigger: GACAAGGGCGGAAGGCAGCTGCACAGAGCAGGGCCACGGCCTTGCACACAGTCCAGGGAGCTTTTGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp ATGAGGTGCTCCGTGTCCTGTAGCGGCTCCCACACCTaGCGCAGGACATATGGGGCCAACACACCCAGGACG +
Preference number: 6 (lower is better)
Translates to: MRCSVSCSGSHT*RRTYGANTPRT
Trigger: CGTCCTGGGTGTGTTGGCCCCATATGTCCTGCGCCAGGTGTGGGAGCCGCTACAGGACACGGAGCACCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp AGCAGGGGCACAGCAGAGGATGGCCCTCCAGGGTTGTaGCGCAGGTCCATGATGAGGTGCTCCGTGTCCTGT +
Preference number: 6 (lower is better)
Translates to: SRGTAEDGPPGL*RRSMMRCSVSC
Trigger: ACAGGACACGGAGCACCTCATCATGGACCTGCGCCACAACCCTGGAGGGCCATCCTCTGCTGTGCCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp AAGGCCCCCAGGCTTTGGTGGAACTCCAGCACTTCCTaGGCTTTGTCCAGGGCCTCCTCGGCCAGCACGATG +
Preference number: 6 (lower is better)
Translates to: KAPRLWWNSSTS*ALSRASSASTM
Trigger: CATCGTGCTGGCCGAGGAGGCCCTGGACAAAGCCCAGGAAGTGCTGGAGTTCCACCAAAGCCTGGGGGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp ACCAGCTCGCCAGGGCTGTGGAACACTAGCAAGCGGTaGTCCCCAGACACCTCCTGGAGGTCTGCTGTGAGC +
Preference number: 6 (lower is better)
Translates to: TSSPGLWNTSKR*SPDTSWRSAVS
Trigger: GCTCACAGCAGACCTCCAGGAGGTGTCTGGGGACCACCGCTTGCTAGTGTTCCACAGCCCTGGCGAGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp CCAGCTTCCCGGCCGTCTGCAGCACCGTGGGCACCTTaGCACGCAGAGCCACTATGTCCTGGGCTATGGAAA +
Preference number: 6 (lower is better)
Translates to: PASRPSAAPWAP*HAEPLCPGLWK
Trigger: TTTCCATAGCCCAGGACATAGTGGCTCTGCGTGCCAAGGTGCCCACGGTGCTGCAGACGGCCGGGAAGCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CAA 72 bp ACCAGCTTCCCGGCCGTCTGCAGCACCGTGGGCACCTaGGCACGCAGAGCCACTATGTCCTGGGCTATGGAA +
Preference number: 6 (lower is better)
Translates to: TSFPAVCSTVGT*ARRATMSWAME
Trigger: TTCCATAGCCCAGGACATAGTGGCTCTGCGTGCCAAGGTGCCCACGGTGCTGCAGACGGCCGGGAAGCTGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CAA 90 bp CGCACCAGGAGCCTGGGATCCTCAGACGCAGCCTGCAGGCCGGCATaGAGCTTGGTGACCAGATCTTCCTCGGAGACCACCGTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: RTRSLGSSDAACRPA*SLVTRSSSETTVEK
Trigger: CTTCTCCACGGTGGTCTCCGAGGAAGATCTGGTCACCAAGCTCAATGCCGGCCTGCAGGCTGCGTCTGAGGATCCCAGGCTCCTGGTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CAA 90 bp ATTGCCTGGCAGCACCGACACCTGGAACACAGAGTCCACCAGTGCTaGCCGGATAGCCTCGTCCTCAGGCAACTCTGGGGCCACCCCTGG +
Preference number: 6 (lower is better)
Translates to: IAWQHRHLEHRVHQC*PDSLVLRQLWGHPW
Trigger: CCAGGGGTGGCCCCAGAGTTGCCTGAGGACGAGGCTATCCGGCAAGCACTGGTGGACTCTGTGTTCCAGGTGTCGGTGCTGCCAGGCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CAA 90 bp TACAGGTGGTCCTGCAGGCCTGGGCTCCGCTTCACCCTCAGCTGGTaGTGCTGGAGCATCTCCTTGGCCCTGGCGAGAGCCTCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: YRWSCRPGLRFTLSW*CWSISLALARASSA
Trigger: TGCAGAAGAGGCTCTCGCCAGGGCCAAGGAGATGCTCCAGCACAACCAGCTGAGGGTGAAGCGGAGCCCAGGCCTGCAGGACCACCTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CAA 90 bp TTATCAGCCACCAGCTTCCCGGCCGTCTGCAGCACCGTGGGCACCTaGGCACGCAGAGCCACTATGTCCTGGGCTATGGAAAGGGCTTCG +
Preference number: 6 (lower is better)
Translates to: LSATSFPAVCSTVGT*ARRATMSWAMERAS
Trigger: CGAAGCCCTTTCCATAGCCCAGGACATAGTGGCTCTGCGTGCCAAGGTGCCCACGGTGCTGCAGACGGCCGGGAAGCTGGTGGCTGATAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 72 bp CACCAAGGGGCCCCAGGGACCTGGACACGGGCACCGTaGAGAAGAAGTCAGACTCGCCTATCCTCAGCTTCC +
Preference number: 6 (lower is better)
Translates to: HQGAPGTWTRAP*RRSQTRLSSAS
Trigger: GGAAGCTGAGGATAGGCGAGTCTGACTTCTTCTTCACGGTGCCCGTGTCCAGGTCCCTGGGGCCCCTTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 72 bp ACTGGTGTGGCTCATCAGGATGTAGAGGTCCTTGTGTaGGCCGTAGCGCTGGCCGGCGACCTGGGGCAAGGT +
Preference number: 6 (lower is better)
Translates to: TGVAHQDVEVLV*AVALAGDLGQG
Trigger: ACCTTGCCCCAGGTCGCCGGCCAGCGCTACGGCTCACACAAGGACCTCTACATCCTGATGAGCCACACCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp CAAAAGCTCCCTGGACTGTGTGCAAGGCCGTGGCCCTaGTCTGTGCAGCTGCCTTCCGCCCTTGTCCTTCTC +
Preference number: 6 (lower is better)
Translates to: QKLPGLCARPWP*SVQLPSALVLL
Trigger: GAGAAGGACAAGGGCGGAAGGCAGCTGCACAGAGCAGGGCCACGGCCTTGCACACAGTCCAGGGAGCTTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp AGCACCGACACCTGGAACACAGAGTCCACCAGTGCTTaGCGGATAGCCTCGTCCTCAGGCAACTCTGGGGCC +
Preference number: 6 (lower is better)
Translates to: STDTWNTESTSA*RIASSSGNSGA
Trigger: GGCCCCAGAGTTGCCTGAGGACGAGGCTATCCGGCAAGCACTGGTGGACTCTGTGTTCCAGGTGTCGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp CGTTCAGGGAGCTCTGCACCCCGGCTGTCAGCACACTaGCCAGCGTCTGCGGGTCTGAGATGCTCAGAATCT +
Preference number: 6 (lower is better)
Translates to: RSGSSAPRLSAH*PASAGLRCSES
Trigger: AGATTCTGAGCATCTCAGACCCGCAGACGCTGGCCAGTGTGCTGACAGCCGGGGTGCAGAGCTCCCTGAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp ACTAAGGCGGAGGTGCCCATGAGATTCCCCCACACGTaGGCCACCAGGAACTCCCCCATCATGCTCAGCACC +
Preference number: 6 (lower is better)
Translates to: TKAEVPMRFPHT*ATRNSPIMLST
Trigger: GGTGCTGAGCATGATGGGGGAGTTCCTGGTGGCCCACGTGTGGGGGAATCTCATGGGCACCTCCGCCTTAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp GATCTTCCTCGGAGACCACCGTGGAGAAGTCCATGCTaGCCAAGTGCTGCAGCAGGGTGGGCACACGGTCCA +
Preference number: 6 (lower is better)
Translates to: DLPRRPPWRSPC*PSAAAGWAHGP
Trigger: TGGACCGTGTGCCCACCCTGCTGCAGCACTTGGCCAGCATGGACTTCTCCACGGTGGTCTCCGAGGAAGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp CCAGGATCTCGGCTAGGGCCACTTCTGAGGTCACCCTaGAGTAGCGGCTCTGCAGACCGCTCAGTTTGGTGG +
Preference number: 6 (lower is better)
Translates to: PGSRLGPLLRSP*SSGSADRSVWW
Trigger: CCACCAAACTGAGCGGTCTGCAGAGCCGCTACTCCAGGGTGACCTCAGAAGTGGCCCTAGCCGAGATCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CAA 72 bp GGATCCTCAGACGCAGCCTGCAGGCCGGCATTGAGCTaGGTGACCAGATCTTCCTCGGAGACCACCGTGGAG +
Preference number: 6 (lower is better)
Translates to: GSSDAACRPALS*VTRSSSETTVE
Trigger: CTCCACGGTGGTCTCCGAGGAAGATCTGGTCACCAAGCTCAATGCCGGCCTGCAGGCTGCGTCTGAGGATCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CAA 72 bp AGCCTGGGATCCTCAGACGCAGCCTGCAGGCCGGCATaGAGCTTGGTGACCAGATCTTCCTCGGAGACCACC +
Preference number: 6 (lower is better)
Translates to: SLGSSDAACRPA*SLVTRSSSETT
Trigger: GGTGGTCTCCGAGGAAGATCTGGTCACCAAGCTCAATGCCGGCCTGCAGGCTGCGTCTGAGGATCCCAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CAA 72 bp CAGCACCGACACCTGGAACACAGAGTCCACCAGTGCTaGCCGGATAGCCTCGTCCTCAGGCAACTCTGGGGC +
Preference number: 6 (lower is better)
Translates to: QHRHLEHRVHQC*PDSLVLRQLWG
Trigger: GCCCCAGAGTTGCCTGAGGACGAGGCTATCCGGCAAGCACTGGTGGACTCTGTGTTCCAGGTGTCGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CAA 90 bp AGGAGCCTGGGATCCTCAGACGCAGCCTGCAGGCCGGCATTGAGCTaGGTGACCAGATCTTCCTCGGAGACCACCGTGGAGAAGTCCATG +
Preference number: 6 (lower is better)
Translates to: RSLGSSDAACRPALS*VTRSSSETTVEKSM
Trigger: CATGGACTTCTCCACGGTGGTCTCCGAGGAAGATCTGGTCACCAAGCTCAATGCCGGCCTGCAGGCTGCGTCTGAGGATCCCAGGCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp CTCTGCACCCCGGCTGTCAGCACACTGGCCAGCGTCTaGGGGTCTGAGATGCTCAGAATCTCATGGCTCTTG +
Preference number: 6 (lower is better)
Translates to: LCTPAVSTLASV*GSEMLRISWLL
Trigger: CAAGAGCCATGAGATTCTGAGCATCTCAGACCCGCAGACGCTGGCCAGTGTGCTGACAGCCGGGGTGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp TGGCAGCACCGACACCTGGAACACAGAGTCCACCAGTaGTTGCCGGATAGCCTCGTCCTCAGGCAACTCTGG +
Preference number: 6 (lower is better)
Translates to: WQHRHLEHRVHQ*LPDSLVLRQLW
Trigger: CCAGAGTTGCCTGAGGACGAGGCTATCCGGCAAGCACTGGTGGACTCTGTGTTCCAGGTGTCGGTGCTGCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp CCATCTGGGTGGGCATGGATGCATATAAGGGGCTGCTaGCCACCTGGTAGATGCCCACAGAGAGTGCGCCTC +
Preference number: 6 (lower is better)
Translates to: PSGWAWMHIRGC*PPGRCPQRVRL
Trigger: GAGGCGCACTCTCTGTGGGCATCTACCAGGTGGGCAGCAGCCCCTTATATGCATCCATGCCCACCCAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp TGGCCATCTGGGTGGGCATGGATGCATATAAGGGGCTaGTGCCCACCTGGTAGATGCCCACAGAGAGTGCGC +
Preference number: 6 (lower is better)
Translates to: WPSGWAWMHIRG*CPPGRCPQRVR
Trigger: GCGCACTCTCTGTGGGCATCTACCAGGTGGGCAGCAGCCCCTTATATGCATCCATGCCCACCCAGATGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp GCTCTGCCTCAAAGAAGTAGGAGCAGAGCAGCGGGATaGCCGTGGAGTAGCTGCCAGGGTTGTAGCGCAGGT +
Preference number: 6 (lower is better)
Translates to: ALPQRSRSRAAG*PWSSCQGCSAG
Trigger: ACCTGCGCTACAACCCTGGCAGCTACTCCACGGCCATCCCGCTGCTCTGCTCCTACTTCTTTGAGGCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp ACCGTGGGCACCTTGGCACGCAGAGCCACTATGTCCTaGGCTATGGAAAGGGCTTCGCTCATGGGCACAGTG +
Preference number: 6 (lower is better)
Translates to: TVGTLARRATMS*AMERASLMGTV
Trigger: CACTGTGCCCATGAGCGAAGCCCTTTCCATAGCCCAGGACATAGTGGCTCTGCGTGCCAAGGTGCCCACGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp AGCGGCTCTGCAGACCGCTCAGTTTGGTGGCCATCTTaGCCCCCAGCTCGGCAGAGGCATAGTTATCAGCCA +
Preference number: 6 (lower is better)
Translates to: SGSADRSVWWPS*PPARQRHSYQP
Trigger: TGGCTGATAACTATGCCTCTGCCGAGCTGGGGGCCAAGATGGCCACCAAACTGAGCGGTCTGCAGAGCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp CTTGGCATTCTCAGGGATATGGGCTGCCTTCAGGTGTaGGTCTCCGGAGAGCATCTGCAGGTCAGCCCCCAG +
Preference number: 6 (lower is better)
Translates to: LGILRDMGCLQV*VSGEHLQVSPQ
Trigger: CTGGGGGCTGACCTGCAGATGCTCTCCGGAGACCCACACCTGAAGGCAGCCCATATCCCTGAGAATGCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp GTAGAGGTTGGTGTCATCCACGTGGTAGGTCTGTGGTaGCTGGCAGCCCCCACTGGTCACCTCCCCAATGAC +
Preference number: 6 (lower is better)
Translates to: VEVGVIHVVGLW*LAAPTGHLPND
Trigger: GTCATTGGGGAGGTGACCAGTGGGGGCTGCCAGCCACCACAGACCTACCACGTGGATGACACCAACCTCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CAA 90 bp CTGGCCAGCGTCTGCGGGTCTGAGATGCTCAGAATCTCATGGCTCTaGATGGCCTGCTGGATGGCTTCCTGCATGCCCAGCAGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: LASVCGSEMLRISWL*MACWMASCMPSRFS
Trigger: GGAGAACCTGCTGGGCATGCAGGAAGCCATCCAGCAGGCCATCAAGAGCCATGAGATTCTGAGCATCTCAGACCCGCAGACGCTGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 72 bp CGTGCAGGATGGTGTTCCCTGGGTGCAGGTAGGAGATaGTGTAGGGAATGCCAGAGACCTGGCCTCCTGTGC +
Preference number: 6 (lower is better)
Translates to: RAGWCSLGAGRR*CRECQRPGLLC
Trigger: GCACAGGAGGCCAGGTCTCTGGCATTCCCTACATCATCTCCTACCTGCACCCAGGGAACACCATCCTGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS TCA 72 bp CCTCCGCGGTGCCGGCCGTCACACTGCTGGTCAGAATaGCCATGCTCTTCTTGGAGCCATAGCGTTCACCTA +
Preference number: 6 (lower is better)
Translates to: PPRCRPSHCWSE*PCSSWSHSVHL
Trigger: TAGGTGAACGCTATGGCTCCAAGAAGAGCATGGTCATTCTGACCAGCAGTGTGACGGCCGGCACCGCGGAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp CCTCAAAGAAGTAGGAGCAGAGCAGCGGGATGGCCGTaGAGTAGCTGCCAGGGTTGTAGCGCAGGTCGATCA +
Preference number: 6 (lower is better)
Translates to: PQRSRSRAAGWP*SSCQGCSAGRS
Trigger: TGATCGACCTGCGCTACAACCCTGGCAGCTACTCCACGGCCATCCCGCTGCTCTGCTCCTACTTCTTTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp GCATGGTGTGTGCAAAGGCCTCGGCCGCAGAGCCACTaGTGTGGCTCATCAGGATGTAGAGGTCCTTGTGTG +
Preference number: 6 (lower is better)
Translates to: AWCVQRPRPQSH*CGSSGCRGPCV
Trigger: CACACAAGGACCTCTACATCCTGATGAGCCACACCAGTGGCTCTGCGGCCGAGGCCTTTGCACACACCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp TGCCTGTGGTGGCACTCATGGCCATCTGGGTGGGCATaGATGCATATAAGGGGCTGCTGCCCACCTGGTAGA +
Preference number: 6 (lower is better)
Translates to: CLWWHSWPSGWA*MHIRGCCPPGR
Trigger: TCTACCAGGTGGGCAGCAGCCCCTTATATGCATCCATGCCCACCCAGATGGCCATGAGTGCCACCACAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp AGGAATGCGGTCCTTGGCATTCTCAGGGATATGGGCTaGCTTCAGGTGTGGGTCTCCGGAGAGCATCTGCAG +
Preference number: 6 (lower is better)
Translates to: RNAVLGILRDMG*LQVWVSGEHLQ
Trigger: CTGCAGATGCTCTCCGGAGACCCACACCTGAAGGCAGCCCATATCCCTGAGAATGCCAAGGACCGCATTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp GAGATGCTCAGAATCTCATGGCTCTTGATGGCCTGCTaGATGGCTTCCTGCATGCCCAGCAGGTTCTCCGGG +
Preference number: 6 (lower is better)
Translates to: EMLRISWLLMAC*MASCMPSRFSG
Trigger: CCCGGAGAACCTGCTGGGCATGCAGGAAGCCATCCAGCAGGCCATCAAGAGCCATGAGATTCTGAGCATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp GCCAGCGTCTGCGGGTCTGAGATGCTCAGAATCTCATaGCTCTTGATGGCCTGCTGGATGGCTTCCTGCATG +
Preference number: 6 (lower is better)
Translates to: ASVCGSEMLRIS*LLMACWMASCM
Trigger: CATGCAGGAAGCCATCCAGCAGGCCATCAAGAGCCATGAGATTCTGAGCATCTCAGACCCGCAGACGCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS GCA 72 bp CAGGGGAAGGGATCTGCATGGGCACAATTCCAGGAATaGGGTCCTTGGCATTCTCAGGGATATGGGCTGCCT +
Preference number: 6 (lower is better)
Translates to: QGKGSAWAQFQE*GPWHSQGYGLP
Trigger: AGGCAGCCCATATCCCTGAGAATGCCAAGGACCGCATTCCTGGAATTGTGCCCATGCAGATCCCTTCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp GGTTCTCCGGGAAGCAGTAGTTATCCAAGAGGACCTTaGCCATGTCCAGCACCAGGCTTGGCTGGAACAGGT +
Preference number: 6 (lower is better)
Translates to: GSPGSSSYPRGP*PCPAPGLAGTG
Trigger: ACCTGTTCCAGCCAAGCCTGGTGCTGGACATGGCCAAGGTCCTCTTGGATAACTACTGCTTCCCGGAGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp AGCAAAACTATCGAAGCGCAGGTAGCCCACATTGCCTaGCAGCACCGACACCTGGAACACAGAGTCCACCAG +
Preference number: 6 (lower is better)
Translates to: SKTIEAQVAHIA*QHRHLEHRVHQ
Trigger: CTGGTGGACTCTGTGTTCCAGGTGTCGGTGCTGCCAGGCAATGTGGGCTACCTGCGCTTCGATAGTTTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp GGATCTGCATGGGCACAATTCCAGGAATGCGGTCCTTaGCATTCTCAGGGATATGGGCTGCCTTCAGGTGTG +
Preference number: 6 (lower is better)
Translates to: GSAWAQFQECGP*HSQGYGLPSGV
Trigger: CACACCTGAAGGCAGCCCATATCCCTGAGAATGCCAAGGACCGCATTCCTGGAATTGTGCCCATGCAGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CCA 72 bp GTCATCAGGCCGGCTGTAGATCTTGTCCAGCAGAACTaGAGGGCCTTCATCAAAGAAGTAGGAGCACAAGAT +
Preference number: 6 (lower is better)
Translates to: VIRPAVDLVQQN*RAFIKEVGAQD
Trigger: ATCTTGTGCTCCTACTTCTTTGATGAAGGCCCTCCAGTTCTGCTGGACAAGATCTACAGCCGGCCTGATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584701.2
CDS CAA 72 bp ATGTTGTCCTCAAGCACGTTAGTGTGGAAGGAAAACTaGATCAGCTCTTCAAATACTTCAGGGGAAGGGATC +
Preference number: 6 (lower is better)
Translates to: MLSSSTLVWKEN*ISSSNTSGEGI
Trigger: GATCCCTTCCCCTGAAGTATTTGAAGAGCTGATCAAGTTTTCCTTCCACACTAACGTGCTTGAGGACAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584701.2