Pregenerated sensors for RBP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000114113Ensembl transcript IDs: ENST00000232217.6, ENST00000506825.1, ENST00000511956.1
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CTCTGTCAAGAGTGGGAAGGTCCCCACAGCTGTTTCTCAAAGCCAGTAGACCACTGGGGAGCTTGTGCTTaGCAGGCCTCCCACGTCGCC | + |
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Preference number: 2 (lower is better) Translates to: LCQEWEGPHSCFSKPVDHWGACA*QASHVA Trigger: GGCGACGTGGGAGGCCTGCCAAGCACAAGCTCCCCA...GTGGTCTACTGGCTTTGAGAAACAGCTGTGGGGACCTTCCCACTCTTGACAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| 3UTR-3UTR GCA 90 bp | CTCTGTCAAGAGTGGGAAGGTCCCCACAGCTGTTTCTCAAAGCCAGTAGACCACGCAGTGGGGAGCTTGTaGTTGGCAGGCCTCCCACGT | + |
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Preference number: 2 (lower is better) Translates to: LCQEWEGPHSCFSKPVDHAVGSL*LAGLPR Trigger: ACGTGGGAGGCCTGCCAAGCACAAGCTCCCCACTGC...GTGGTCTACTGGCTTTGAGAAACAGCTGTGGGGACCTTCCCACTCTTGACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| 3UTR-3UTR CAA 90 bp | TGTCAAGAGTGGGAAGGTCCCCACAGCTGTTTCTCAAAGCCAGTAGACCACTCATGGGCAGTGGGGAGCTaGTGCTTGGCAGGCCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: CQEWEGPHSCFSKPVDHSWAVGS*CLAGLP Trigger: TGGGAGGCCTGCCAAGCACAAGCTCCCCACTGCCCA...TGAGTGGTCTACTGGCTTTGAGAAACAGCTGTGGGGACCTTCCCACTCTTGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR CCA 90 bp | TGTTTCTCAAAGCCAGTAGACCACTCAGTGTGGGCAGTGGGGAGCTTGTGCTTGTGGGGAGCTTGTGCTTaGCAGGCCTCCCACGTCGCC | + |
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Preference number: 4 (lower is better) Translates to: CFSKPVDHSVWAVGSLCLWGACA*QASHVA Trigger: GGCGACGTGGGAGGCCTGCCAAGCACAAGCTCCCCA...CAAGCACAAGCTCCCCACTGCCCACACTGAGTGGTCTACTGGCTTTGAGAAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR TCA 90 bp | CTGTTTCTCAAAGCCAGTAGACCACTCAGTGTGGGCAGTGGGGAGCTTGTGCTTTGGCCACTGGTTCGGTaGGGGTTTGTGGTGGATGGC | + |
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Preference number: 4 (lower is better) Translates to: LFLKASRPLSVGSGELVLWPLVR*GFVVDG Trigger: GCCATCCACCACAAACCCTCACCGAACCAGTGGCCA...AAGCACAAGCTCCCCACTGCCCACACTGAGTGGTCTACTGGCTTTGAGAAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR GCA 90 bp | TGTCAAGAGTGGGAAGGTCCCCACAGCTGTTTCTCAAAGCCAGTAGACCACTCATCCCCCTCAATCCACTaGTTCCAGCCGCGGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CQEWEGPHSCFSKPVDHSSPSIH*FQPRFS Trigger: GGAGAACCGCGGCTGGAAGCAGTGGATTGAGGGGGA...TGAGTGGTCTACTGGCTTTGAGAAACAGCTGTGGGGACCTTCCCACTCTTGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR CCA 90 bp | CTGTTTCTCAAAGCCAGTAGACCACTCAGTGTGGGCAGTGGGGAGCTTGTGCTTGGTGAGGGTTTGTGGTaGATGGCAAGGAGCAGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LFLKASRPLSVGSGELVLGEGLW*MARSRL Trigger: CAGCCTGCTCCTTGCCATCCACCACAAACCCTCACC...AAGCACAAGCTCCCCACTGCCCACACTGAGTGGTCTACTGGCTTTGAGAAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR CCA 90 bp | CTGTCAAGAGTGGGAAGGTCCCCACAGCTGTTTCTCAAAGCCAGTAGACCACTCCATGGTGGTGGCCACTaGTTCGGTGAGGGTTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSRVGRSPQLFLKASRPLHGGGH*FGEGLW Trigger: CCACAAACCCTCACCGAACCAGTGGCCACCACCATG...GAGTGGTCTACTGGCTTTGAGAAACAGCTGTGGGGACCTTCCCACTCTTGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR CCA 90 bp | CTGTTTCTCAAAGCCAGTAGACCACTCAGTGTGGGCAGTGGGGAGCTTGTGCTTTCTGGTCCCTTGTCATaGTGGTGGCCACTGGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLKASRPLSVGSGELVLSGPLS*WWPLVR Trigger: CCGAACCAGTGGCCACCACCATGACAAGGGACCAGA...AAGCACAAGCTCCCCACTGCCCACACTGAGTGGTCTACTGGCTTTGAGAAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR CCA 90 bp | CTCTGTCAAGAGTGGGAAGGTCCCCACAGCTGTTTCTCAAAGCCAGTAGACCACGTAGACCACTCAGTGTaGGCAGTGGGGAGCTTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LCQEWEGPHSCFSKPVDHVDHSV*AVGSLC Trigger: GCACAAGCTCCCCACTGCCCACACTGAGTGGTCTAC...GTGGTCTACTGGCTTTGAGAAACAGCTGTGGGGACCTTCCCACTCTTGACAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR CCA 90 bp | TGTTTCTCAAAGCCAGTAGACCACTCAGTGTGGGCAGTGGGGAGCTTGTGCTTGGGGCTCTGTCAAGAGTaGGAAGGTCCCCACAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CFSKPVDHSVWAVGSLCLGLCQE*EGPHSC Trigger: ACAGCTGTGGGGACCTTCCCACTCTTGACAGAGCCC...CAAGCACAAGCTCCCCACTGCCCACACTGAGTGGTCTACTGGCTTTGAGAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR CCA 90 bp | CTCTGTCAAGAGTGGGAAGGTCCCCACAGCTGTTTCTCAAAGCCAGTAGACCACTTCGGTGAGGGTTTGTaGTGGATGGCAAGGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LCQEWEGPHSCFSKPVDHFGEGL*WMARSR Trigger: CCTGCTCCTTGCCATCCACCACAAACCCTCACCGAA...GTGGTCTACTGGCTTTGAGAAACAGCTGTGGGGACCTTCCCACTCTTGACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR GCA 90 bp | TGTTTCTCAAAGCCAGTAGACCACTCAGTGTGGGCAGTGGGGAGCTTGTGCTTGCTGAGTGAGACGTACTaGAATCTTGCGGGTGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: CFSKPVDHSVWAVGSLCLLSETY*NLAGGK Trigger: TTTGCCACCCGCAAGATTGCAGTACGTCTCACTCAG...CAAGCACAAGCTCCCCACTGCCCACACTGAGTGGTCTACTGGCTTTGAGAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR GCA 90 bp | CTCTGTCAAGAGTGGGAAGGTCCCCACAGCTGTTTCTCAAAGCCAGTAGACCACTTCCCAGGTGACCAGTaGCTTAACATGCCGGTTATC | + |
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Preference number: 4 (lower is better) Translates to: LCQEWEGPHSCFSKPVDHFPGDQ*LNMPVI Trigger: GATAACCGGCATGTTAAGGCACTGGTCACCTGGGAA...GTGGTCTACTGGCTTTGAGAAACAGCTGTGGGGACCTTCCCACTCTTGACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR TCA 90 bp | CTGTTTCTCAAAGCCAGTAGACCACTCAGTGTGGGCAGTGGGGAGCTTGTGCTTTTCTTTTTGAACACTTaGCGGCACACCTGGTCACCA | + |
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Preference number: 4 (lower is better) Translates to: LFLKASRPLSVGSGELVLFFLNT*RHTWSP Trigger: TGGTGACCAGGTGTGCCGTCAAGTGTTCAAAAAGAA...AAGCACAAGCTCCCCACTGCCCACACTGAGTGGTCTACTGGCTTTGAGAAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR GCA 90 bp | TGTTTCTCAAAGCCAGTAGACCACTCAGTGTGGGCAGTGGGGAGCTTGTGCTTGACCAGTGCCTTAACATaGCGGTTATCCAGGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CFSKPVDHSVWAVGSLCLTSALT*RLSRLF Trigger: AAAGAGCCTGGATAACCGGCATGTTAAGGCACTGGT...CAAGCACAAGCTCCCCACTGCCCACACTGAGTGGTCTACTGGCTTTGAGAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR GCA 90 bp | CTCTGTCAAGAGTGGGAAGGTCCCCACAGCTGTTTCTCAAAGCCAGTAGACCACTCCTTCTCCCCCTTTTaGACACACACAAGGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: LCQEWEGPHSCFSKPVDHSFSPF*THTRTS Trigger: TGATGTCCTTGTGTGTGTGCAAAAGGGGGAGAAGGA...GTGGTCTACTGGCTTTGAGAAACAGCTGTGGGGACCTTCCCACTCTTGACAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR CCA 90 bp | TGTTTCTCAAAGCCAGTAGACCACTCAGTGTGGGCAGTGGGGAGCTTGTGCTTGCTGCAATCTTGCGGGTaGCAAAATCAATATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CFSKPVDHSVWAVGSLCLLQSCG*QNQYPG Trigger: CCCTGGATATTGATTTTGCCACCCGCAAGATTGCAG...CAAGCACAAGCTCCCCACTGCCCACACTGAGTGGTCTACTGGCTTTGAGAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR TCA 90 bp | CTGTTTCTCAAAGCCAGTAGACCACTCAGTGTGGGCAGTGGGGAGCTTGTGCTTTCAATAACCTTCGTCTaGGTGAGACGTACTGCAATC | + |
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Preference number: 4 (lower is better) Translates to: LFLKASRPLSVGSGELVLSITFV*VRRTAI Trigger: GATTGCAGTACGTCTCACTCAGACGAAGGTTATTGA...AAGCACAAGCTCCCCACTGCCCACACTGAGTGGTCTACTGGCTTTGAGAAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR GCA 90 bp | CTGTCAAGAGTGGGAAGGTCCCCACAGCTGTTTCTCAAAGCCAGTAGACCACTCGACGTACTGCAATCTTaGGGGTGGCAAAATCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LSRVGRSPQLFLKASRPLDVLQS*GWQNQY Trigger: ATATTGATTTTGCCACCCGCAAGATTGCAGTACGTC...GAGTGGTCTACTGGCTTTGAGAAACAGCTGTGGGGACCTTCCCACTCTTGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR GCA 90 bp | CTGTTTCTCAAAGCCAGTAGACCACTCAGTGTGGGCAGTGGGGAGCTTGTGCTTGAATATGTCTATCACTaGTACATAGGCATTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LFLKASRPLSVGSGELVLEYVYH*YIGILF Trigger: AAACAGAATGCCTATGTAGCAGTGATAGACATATTC...AAGCACAAGCTCCCCACTGCCCACACTGAGTGGTCTACTGGCTTTGAGAAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS CCA 90 bp | CTGGTCCCTTGTCATGGTGGTGGCCACTGGTTCGGTGAGGGTTTGTaGTGGATGGCAAGGAGCAGGCTGCTGTCCTTGGGAGCATCTGAC | + |
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Preference number: 5 (lower is better) Translates to: LVPCHGGGHWFGEGL*WMARSRLLSLGASD Trigger: GTCAGATGCTCCCAAGGACAGCAGCCTGCTCCTTGCCATCCACCACAAACCCTCACCGAACCAGTGGCCACCACCATGACAAGGGACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506825.1 |
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| CDS-3UTR CAA 90 bp | CTCTGTCAAGAGTGGGAAGGTCCCCACAGCTGTTTCTCAAAGCCAGTAGACCACGTGGGGAGCTTGTGCTaGGCAGGCCTCCCACGTCGC | + |
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Preference number: 5 (lower is better) Translates to: LCQEWEGPHSCFSKPVDHVGSLC*AGLPRR Trigger: GCGACGTGGGAGGCCTGCCAAGCACAAGCTCCCCAC...GTGGTCTACTGGCTTTGAGAAACAGCTGTGGGGACCTTCCCACTCTTGACAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS TCA 90 bp | GGAGCTTGTGCTTGGCAGGCCTCCCACGTCGCCATCATTTCTTTTTaGACACTTGACGGCACACCTGGTCACCACAGGTCAGCTCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: GACAWQASHVAIISF*TLDGTPGHHRSAPG Trigger: ACCTGGAGCTGACCTGTGGTGACCAGGTGTGCCGTCAAGTGTTCAAAAAGAAATGATGGCGACGTGGGAGGCCTGCCAAGCACAAGCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS GCA 90 bp | CCCTCAATCCACTGCTTCCAGCCGCGGTTCTCCTTCTCCCCCTTTTaGACACACACAAGGACATCACCTTCCCAGGTGACCAGTGCCTTA | + |
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Preference number: 5 (lower is better) Translates to: PSIHCFQPRFSFSPF*THTRTSPSQVTSAL Trigger: TAAGGCACTGGTCACCTGGGAAGGTGATGTCCTTGTGTGTGTGCAAAAGGGGGAGAAGGAGAACCGCGGCTGGAAGCAGTGGATTGAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS TCA 90 bp | TGCTTGGCAGGCCTCCCACGTCGCCATCATTTCTTTTTGAACACTTaGCGGCACACCTGGTCACCACAGGTCAGCTCCAGGTACAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: CLAGLPRRHHFFLNT*RHTWSPQVSSRYSL Trigger: CAAGCTGTACCTGGAGCTGACCTGTGGTGACCAGGTGTGCCGTCAAGTGTTCAAAAAGAAATGATGGCGACGTGGGAGGCCTGCCAAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS CCA 90 bp | CTGGTCCCTTGTCATGGTGGTGGCCACTGGTTCGGTGAGGGTTTGTaGTGGATGGCAAGGAGCAGGCTAAGTCCTTGTGGAATTCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: LVPCHGGGHWFGEGL*WMARSRLSPCGILQ Trigger: CTGAAGAATTCCACAAGGACTTAGCCTGCTCCTTGCCATCCACCACAAACCCTCACCGAACCAGTGGCCACCACCATGACAAGGGACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511956.1 |
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| CDS-3UTR CAA 90 bp | TGTTTCTCAAAGCCAGTAGACCACTCAGTGTGGGCAGTGGGGAGCTTGTGCTTGAGCTCCAGGTACAGCTaGTCCCCCTCAATCCACTGC | + |
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Preference number: 5 (lower is better) Translates to: CFSKPVDHSVWAVGSLCLSSRYS*SPSIHC Trigger: GCAGTGGATTGAGGGGGACAAGCTGTACCTGGAGCT...CAAGCACAAGCTCCCCACTGCCCACACTGAGTGGTCTACTGGCTTTGAGAAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR CAA 90 bp | TGTCAAGAGTGGGAAGGTCCCCACAGCTGTTTCTCAAAGCCAGTAGACCACTCATGGTTCGGTGAGGGTTaGTGGTGGATGGCAAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: CQEWEGPHSCFSKPVDHSWFGEG*WWMARS Trigger: GCTCCTTGCCATCCACCACAAACCCTCACCGAACCA...TGAGTGGTCTACTGGCTTTGAGAAACAGCTGTGGGGACCTTCCCACTCTTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS GCA 90 bp | TTCTCAAAGCCAGTAGACCACTCAGTGTGGGCAGTGGGGAGCTTGTaGTTGGCAGGCCTCCCACGTCGCCATCATTTCTTTTTGAACACT | + |
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Preference number: 5 (lower is better) Translates to: FSKPVDHSVWAVGSL*LAGLPRRHHFFLNT Trigger: AGTGTTCAAAAAGAAATGATGGCGACGTGGGAGGCCTGCCAAGCACAAGCTCCCCACTGCCCACACTGAGTGGTCTACTGGCTTTGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR CAA 90 bp | CTGTTTCTCAAAGCCAGTAGACCACTCAGTGTGGGCAGTGGGGAGCTTGTGCTTTTTCTTTTTGAACACTaGACGGCACACCTGGTCACC | + |
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Preference number: 5 (lower is better) Translates to: LFLKASRPLSVGSGELVLFLFEH*TAHLVT Trigger: GGTGACCAGGTGTGCCGTCAAGTGTTCAAAAAGAAA...AAGCACAAGCTCCCCACTGCCCACACTGAGTGGTCTACTGGCTTTGAGAAACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR CAA 90 bp | CTGTCAAGAGTGGGAAGGTCCCCACAGCTGTTTCTCAAAGCCAGTAGACCACTCAGACGTACTGCAATCTaGCGGGTGGCAAAATCAATA | + |
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Preference number: 5 (lower is better) Translates to: LSRVGRSPQLFLKASRPLRRTAI*RVAKSI Trigger: TATTGATTTTGCCACCCGCAAGATTGCAGTACGTCT...GAGTGGTCTACTGGCTTTGAGAAACAGCTGTGGGGACCTTCCCACTCTTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR CAA 90 bp | CTCTGTCAAGAGTGGGAAGGTCCCCACAGCTGTTTCTCAAAGCCAGTAGACCACGGTTATCCAGGCTCTTaGTGTACTCGTCAAACTCTA | + |
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Preference number: 5 (lower is better) Translates to: LCQEWEGPHSCFSKPVDHGYPGS*CTRQTL Trigger: TAGAGTTTGACGAGTACACAAAGAGCCTGGATAACC...GTGGTCTACTGGCTTTGAGAAACAGCTGTGGGGACCTTCCCACTCTTGACAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS-3UTR CAA 90 bp | CTGTCAAGAGTGGGAAGGTCCCCACAGCTGTTTCTCAAAGCCAGTAGACCACTCGAAGTTATCACCATCTaGATCAATAACCTTCGTCTG | + |
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Preference number: 5 (lower is better) Translates to: LSRVGRSPQLFLKASRPLEVITI*INNLRL Trigger: CAGACGAAGGTTATTGATCAAGATGGTGATAACTTC...GAGTGGTCTACTGGCTTTGAGAAACAGCTGTGGGGACCTTCCCACTCTTGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS GCA 90 bp | GTTATCACCATCTTGATCAATAACCTTCGTCTGAGTGAGACGTACTaGAATCTTGCGGGTGGCAAAATCAATATCCAGGGCCTTCATGTA | + |
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Preference number: 5 (lower is better) Translates to: VITILINNLRLSETY*NLAGGKINIQGLHV Trigger: TACATGAAGGCCCTGGATATTGATTTTGCCACCCGCAAGATTGCAGTACGTCTCACTCAGACGAAGGTTATTGATCAAGATGGTGATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000232217.6 ENST00000511956.1 |
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| CDS CCA 72 bp | GTGGTGGCCACTGGTTCGGTGAGGGTTTGTGGTGGATaGCAAGGAGCAGGCTGCTGTCCTTGGGAGCATCTG | + |
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Preference number: 6 (lower is better) Translates to: VVATGSVRVCGG*QGAGCCPWEHL Trigger: CAGATGCTCCCAAGGACAGCAGCCTGCTCCTTGCCATCCACCACAAACCCTCACCGAACCAGTGGCCACCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506825.1 |
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| CDS CCA 72 bp | CATGGTGGTGGCCACTGGTTCGGTGAGGGTTTGTGGTaGATGGCAAGGAGCAGGCTGCTGTCCTTGGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: HGGGHWFGEGLW*MARSRLLSLGA Trigger: TGCTCCCAAGGACAGCAGCCTGCTCCTTGCCATCCACCACAAACCCTCACCGAACCAGTGGCCACCACCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506825.1 |
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| CDS TCA 72 bp | TCTGGTCCCTTGTCATGGTGGTGGCCACTGGTTCGGTaGGGGTTTGTGGTGGATGGCAAGGAGCAGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SGPLSWWWPLVR*GFVVDGKEQAA Trigger: TGCAGCCTGCTCCTTGCCATCCACCACAAACCCTCACCGAACCAGTGGCCACCACCATGACAAGGGACCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS TCA 72 bp | TCTGGTCCCTTGTCATGGTGGTGGCCACTGGTTCGGTaGGGGTTTGTGGTGGATGGCAAGGAGCAGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SGPLSWWWPLVR*GFVVDGKEQAA Trigger: AGCAGCCTGCTCCTTGCCATCCACCACAAACCCTCACCGAACCAGTGGCCACCACCATGACAAGGGACCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506825.1 |
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| CDS CAA 72 bp | AAGCCAGTAGACCACTCAGTGTGGGCAGTGGGGAGCTaGTGCTTGGCAGGCCTCCCACGTCGCCATCATTTC | + |
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Preference number: 6 (lower is better) Translates to: KPVDHSVWAVGS*CLAGLPRRHHF Trigger: GAAATGATGGCGACGTGGGAGGCCTGCCAAGCACAAGCTCCCCACTGCCCACACTGAGTGGTCTACTGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS CAA 72 bp | CCTTGTCATGGTGGTGGCCACTGGTTCGGTGAGGGTTaGTGGTGGATGGCAAGGAGCAGGCTGCTGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: PCHGGGHWFGEG*WWMARSRLLSL Trigger: CAAGGACAGCAGCCTGCTCCTTGCCATCCACCACAAACCCTCACCGAACCAGTGGCCACCACCATGACAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506825.1 |
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| CDS CAA 90 bp | ATTCTGGTCCCTTGTCATGGTGGTGGCCACTGGTTCGGTGAGGGTTaGTGGTGGATGGCAAGGAGCAGGCTGCTGTCCTTGGGAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: ILVPCHGGGHWFGEG*WWMARSRLLSLGAS Trigger: AGATGCTCCCAAGGACAGCAGCCTGCTCCTTGCCATCCACCACAAACCCTCACCGAACCAGTGGCCACCACCATGACAAGGGACCAGAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506825.1 |
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| CDS TCA 72 bp | TCTGGTCCCTTGTCATGGTGGTGGCCACTGGTTCGGTaGGGGTTTGTGGTGGATGGCAAGGAGCAGGCTAAG | + |
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Preference number: 6 (lower is better) Translates to: SGPLSWWWPLVR*GFVVDGKEQAK Trigger: CTTAGCCTGCTCCTTGCCATCCACCACAAACCCTCACCGAACCAGTGGCCACCACCATGACAAGGGACCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511956.1 |
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| CDS GCA 72 bp | CACTGCTTCCAGCCGCGGTTCTCCTTCTCCCCCTTTTaGACACACACAAGGACATCACCTTCCCAGGTGACC | + |
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Preference number: 6 (lower is better) Translates to: HCFQPRFSFSPF*THTRTSPSQVT Trigger: GGTCACCTGGGAAGGTGATGTCCTTGTGTGTGTGCAAAAGGGGGAGAAGGAGAACCGCGGCTGGAAGCAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS TCA 72 bp | GGCCTCCCACGTCGCCATCATTTCTTTTTGAACACTTaGCGGCACACCTGGTCACCACAGGTCAGCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GLPRRHHFFLNT*RHTWSPQVSSR Trigger: CCTGGAGCTGACCTGTGGTGACCAGGTGTGCCGTCAAGTGTTCAAAAAGAAATGATGGCGACGTGGGAGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS CCA 72 bp | TGTCATGGTGGTGGCCACTGGTTCGGTGAGGGTTTGTaGTGGATGGCAAGGAGCAGGCTAAGTCCTTGTGGA | + |
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Preference number: 6 (lower is better) Translates to: CHGGGHWFGEGL*WMARSRLSPCG Trigger: TCCACAAGGACTTAGCCTGCTCCTTGCCATCCACCACAAACCCTCACCGAACCAGTGGCCACCACCATGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511956.1 |
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| CDS CAA 72 bp | CCTTGTCATGGTGGTGGCCACTGGTTCGGTGAGGGTTaGTGGTGGATGGCAAGGAGCAGGCTAAGTCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: PCHGGGHWFGEG*WWMARSRLSPC Trigger: ACAAGGACTTAGCCTGCTCCTTGCCATCCACCACAAACCCTCACCGAACCAGTGGCCACCACCATGACAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511956.1 |
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| CDS CAA 90 bp | GTGCTTGGCAGGCCTCCCACGTCGCCATCATTTCTTTTTGAACACTaGACGGCACACCTGGTCACCACAGGTCAGCTCCAGGTACAGCTT | + |
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Preference number: 6 (lower is better) Translates to: VLGRPPTSPSFLFEH*TAHLVTTGQLQVQL Trigger: AAGCTGTACCTGGAGCTGACCTGTGGTGACCAGGTGTGCCGTCAAGTGTTCAAAAAGAAATGATGGCGACGTGGGAGGCCTGCCAAGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS CCA 72 bp | CATGGTGGTGGCCACTGGTTCGGTGAGGGTTTGTGGTaGATGGCAAGGAGCAGGCTAAGTCCTTGTGGAATT | + |
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Preference number: 6 (lower is better) Translates to: HGGGHWFGEGLW*MARSRLSPCGI Trigger: AATTCCACAAGGACTTAGCCTGCTCCTTGCCATCCACCACAAACCCTCACCGAACCAGTGGCCACCACCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511956.1 |
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| CDS CAA 72 bp | AGGCCTCCCACGTCGCCATCATTTCTTTTTGAACACTaGACGGCACACCTGGTCACCACAGGTCAGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: RPPTSPSFLFEH*TAHLVTTGQLQ Trigger: CTGGAGCTGACCTGTGGTGACCAGGTGTGCCGTCAAGTGTTCAAAAAGAAATGATGGCGACGTGGGAGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS CAA 90 bp | TGTTTCTCAAAGCCAGTAGACCACTCAGTGTGGGCAGTGGGGAGCTaGTGCTTGGCAGGCCTCCCACGTCGCCATCATTTCTTTTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: CFSKPVDHSVWAVGS*CLAGLPRRHHFFLN Trigger: GTTCAAAAAGAAATGATGGCGACGTGGGAGGCCTGCCAAGCACAAGCTCCCCACTGCCCACACTGAGTGGTCTACTGGCTTTGAGAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000232217.6 |
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| CDS CAA 90 bp | ATTCTGGTCCCTTGTCATGGTGGTGGCCACTGGTTCGGTGAGGGTTaGTGGTGGATGGCAAGGAGCAGGCTAAGTCCTTGTGGAATTCTT | + |
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Preference number: 6 (lower is better) Translates to: ILVPCHGGGHWFGEG*WWMARSRLSPCGIL Trigger: AAGAATTCCACAAGGACTTAGCCTGCTCCTTGCCATCCACCACAAACCCTCACCGAACCAGTGGCCACCACCATGACAAGGGACCAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511956.1 |
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| CDS GCA 72 bp | ATCTTGATCAATAACCTTCGTCTGAGTGAGACGTACTaGAATCTTGCGGGTGGCAAAATCAATATCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: ILINNLRLSETY*NLAGGKINIQG Trigger: GCCCTGGATATTGATTTTGCCACCCGCAAGATTGCAGTACGTCTCACTCAGACGAAGGTTATTGATCAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000232217.6 ENST00000511956.1 |
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| CDS CAA 90 bp | GTTGCGGAATGTGCTAGTGGTTTTTGTCTTGAAGTTATCACCATCTaGATCAATAACCTTCGTCTGAGTGAGACGTACTGCAATCTTGCG | + |
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Preference number: 6 (lower is better) Translates to: VAECASGFCLEVITI*INNLRLSETYCNLA Trigger: CGCAAGATTGCAGTACGTCTCACTCAGACGAAGGTTATTGATCAAGATGGTGATAACTTCAAGACAAAAACCACTAGCACATTCCGCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000232217.6 ENST00000511956.1 |
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| CDS CAA 72 bp | TGTGCTAGTGGTTTTTGTCTTGAAGTTATCACCATCTaGATCAATAACCTTCGTCTGAGTGAGACGTACTGC | + |
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Preference number: 6 (lower is better) Translates to: CASGFCLEVITI*INNLRLSETYC Trigger: GCAGTACGTCTCACTCAGACGAAGGTTATTGATCAAGATGGTGATAACTTCAAGACAAAAACCACTAGCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000232217.6 ENST00000511956.1 |
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