Pregenerated sensors for RBMXL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000170748

Ensembl transcript IDs: ENST00000306904.7

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CAA 90 bp	AATAAATTTGTTGGTAGTGAAAATGAATGCTATCAATTGAAGGATTaGGGATTTGCTTGTTTTGTAGCTTTGTGGTTGGTTGGCCAAACC	+
Preference number: 2 (lower is better) Translates to: NKFVGSENECYQLKD*GFACFVALWLVGQT Trigger: GGTTTGGCCAACCAACCACAAAGCTACAAAACAAGCAAATCCCAAATCCTTCAATTGATAGCATTCATTTTCACTACCAACAAATTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000306904.7
CDS TCA 90 bp	CCATGTTTGCCGGTCGAACGGTCGGTCAGTGGCGGTGGGAGGCGGTaGGGCGGCGCCAGTCGCAGCCTTCGAGCTCGCTCGTCGAGGGCG	+
Preference number: 5 (lower is better) Translates to: PCLPVERSVSGGGRR*GGASRSLRARSSRA Trigger: CGCCCTCGACGAGCGAGCTCGAAGGCTGCGACTGGCGCCGCCTCACCGCCTCCCACCGCCACTGACCGACCGTTCGACCGGCAAACATGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306904.7
CDS CCA 90 bp	TCCGCTTCAACCATGTTTGCCGGTCGAACGGTCGGTCAGTGGCGGTaGGAGGCGGTGAGGCGGCGCCAGTCGCAGCCTTCGAGCTCGCTC	+
Preference number: 5 (lower is better) Translates to: SASTMFAGRTVGQWR*EAVRRRQSQPSSSL Trigger: GAGCGAGCTCGAAGGCTGCGACTGGCGCCGCCTCACCGCCTCCCACCGCCACTGACCGACCGTTCGACCGGCAAACATGGTTGAAGCGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306904.7
CDS TCA 72 bp	CCGGTCGAACGGTCGGTCAGTGGCGGTGGGAGGCGGTaGGGCGGCGCCAGTCGCAGCCTTCGAGCTCGCTCG	+
Preference number: 6 (lower is better) Translates to: PVERSVSGGGRR*GGASRSLRARS Trigger: CGAGCGAGCTCGAAGGCTGCGACTGGCGCCGCCTCACCGCCTCCCACCGCCACTGACCGACCGTTCGACCGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306904.7
CDS CCA 72 bp	ACCATGTTTGCCGGTCGAACGGTCGGTCAGTGGCGGTaGGAGGCGGTGAGGCGGCGCCAGTCGCAGCCTTCG	+
Preference number: 6 (lower is better) Translates to: TMFAGRTVGQWR*EAVRRRQSQPS Trigger: CGAAGGCTGCGACTGGCGCCGCCTCACCGCCTCCCACCGCCACTGACCGACCGTTCGACCGGCAAACATGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306904.7
CDS CCA 72 bp	GCTTCAACCATGTTTGCCGGTCGAACGGTCGGTCAGTaGCGGTGGGAGGCGGTGAGGCGGCGCCAGTCGCAG	+
Preference number: 6 (lower is better) Translates to: ASTMFAGRTVGQ*RWEAVRRRQSQ Trigger: CTGCGACTGGCGCCGCCTCACCGCCTCCCACCGCCACTGACCGACCGTTCGACCGGCAAACATGGTTGAAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000306904.7
CDS CCA 72 bp	GGGGTTCGCGGTAGTCTCGGCTCGAGTAGCCGTCTCTaGACGAGTAGCCCTCATCCCGCGGGCCCAGGTAGG	+
Preference number: 6 (lower is better) Translates to: GVRGSLGSSSRL*TSSPHPAGPGR Trigger: CCTACCTGGGCCCGCGGGATGAGGGCTACTCGTCCAGAGACGGCTACTCGAGCCGAGACTACCGCGAACCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000306904.7

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