Pregenerated sensors for RBMX2 (Homo sapiens)
Ensembl gene IDs: ENSG00000134597Ensembl transcript IDs: ENST00000305536.11, ENST00000370947.1, ENST00000469953.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCCAATCGTATGACGCCACACAGGTAAGGGCCAGAAGGGCCCTGTaGCCATGGGTTACCCCTAGTTTGCAAGAGCCCAAGGAGTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: PQSYDATQVRARRAL*PWVTPSLQEPKESS Trigger: ACTGGACTCCTTGGGCTCTTGCAAACTAGGGGTAACCCATGGTCACAGGGCCCTTCTGGCCCTTACCTGTGTGGCGTCATACGATTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| 3UTR TCA 90 bp | GAAGAATATACAGGTCTCCTATTCATTCTTGTTCCCTTCGGGCTGTaGTTCTCAGCCTCCAGGCAGAGATTGCCTTTGCTCACTAACCTT | + |
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Preference number: 1 (lower is better) Translates to: EEYTGLLFILVPFGL*FSASRQRLPLLTNL Trigger: AAGGTTAGTGAGCAAAGGCAATCTCTGCCTGGAGGCTGAGAATCACAGCCCGAAGGGAACAAGAATGAATAGGAGACCTGTATATTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| 3UTR-3UTR GCA 90 bp | GACCATGGGTTACCCCTAGTTTGCAAGAGCCCAAGGAGTCCAGTCTGTTCCAGTCTCCAGCCCTCCCCATaGAGGGATGCCATTCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: DHGLPLVCKSPRSPVCSSLQPSP*RDAIQP Trigger: AGGCTGAATGGCATCCCTGCATGGGGAGGGCTGGAG...ACTGGAACAGACTGGACTCCTTGGGCTCTTGCAAACTAGGGGTAACCCATGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| 3UTR-3UTR TCA 90 bp | CCCTGTGACCATGGGTTACCCCTAGTTTGCAAGAGCCCAAGGAGTCCAGTCTGTACCATGTCCTGGGACTaGTCTAGAACAGAAGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: PCDHGLPLVCKSPRSPVCTMSWD*SRTEAP Trigger: TGGAGCTTCTGTTCTAGATCAGTCCCAGGACATGGT...ACAGACTGGACTCCTTGGGCTCTTGCAAACTAGGGGTAACCCATGGTCACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| 3UTR-3UTR CCA 90 bp | GTCCACTGGTGGTTGCTAGGGACAGGGAGGAGGGAGGAAACGGGGAGCTCTTGTGGTTACACAACACTGTaGATGTTCAGTACCAAATGC | + |
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Preference number: 2 (lower is better) Translates to: VHWWLLGTGRREETGSSCGYTTL*MFSTKC Trigger: GCATTTGGTACTGAACATCCACAGTGTTGTGTAACC...ACAAGAGCTCCCCGTTTCCTCCCTCCTCCCTGTCCCTAGCAACCACCAGTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305536.11 |
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| 3UTR-3UTR TCA 90 bp | ATATACAGGTCTCCTATTCATTCTTGTTCCCTTCGGGCTGTGATTCTCAGCCTCGCCAGAAGGGCCCTGTaGCCATGGGTTACCCCTAGT | + |
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Preference number: 2 (lower is better) Translates to: IYRSPIHSCSLRAVILSLARRAL*PWVTPS Trigger: ACTAGGGGTAACCCATGGTCACAGGGCCCTTCTGGC...GAGGCTGAGAATCACAGCCCGAAGGGAACAAGAATGAATAGGAGACCTGTATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| 3UTR-3UTR GCA 90 bp | GAAGTCCACTGGTGGTTGCTAGGGACAGGGAGGAGGGAGGAAACGGGGAGCTCTGACATTAAAAAGTTCTaGAAACAGGAAGGTTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: EVHWWLLGTGRREETGSSDIKKF*KQEGLG Trigger: GCCCAAACCTTCCTGTTTGCAGAACTTTTTAATGTC...AGAGCTCCCCGTTTCCTCCCTCCTCCCTGTCCCTAGCAACCACCAGTGGACTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305536.11 |
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| 3UTR-3UTR GCA 90 bp | CAGGTCTCCTATTCATTCTTGTTCCCTTCGGGCTGTGATTCTCAGCCTCCAGGCATTTCCTCTGTGCTTTaGCCCAATCGTATGACGCCA | + |
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Preference number: 2 (lower is better) Translates to: QVSYSFLFPSGCDSQPPGISSVL*PNRMTP Trigger: TGGCGTCATACGATTGGGGCAAAGCACAGAGGAAAT...GCCTGGAGGCTGAGAATCACAGCCCGAAGGGAACAAGAATGAATAGGAGACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| 3UTR-3UTR TCA 90 bp | CAGAGATTGCCTTTGCTCACTAACCTTACACTCATCGAGAAACAAAGAAAGCAATTTGCCCCAATCGTATaGCGCCACACAGGTAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: QRLPLLTNLTLIEKQRKQFAPIV*RHTGKG Trigger: GCCCTTACCTGTGTGGCGTCATACGATTGGGGCAAA...TTGCTTTCTTTGTTTCTCGATGAGTGTAAGGTTAGTGAGCAAAGGCAATCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| 3UTR TCA 72 bp | TATGACGCCACACAGGTAAGGGCCAGAAGGGCCCTGTaGCCATGGGTTACCCCTAGTTTGCAAGAGCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: YDATQVRARRAL*PWVTPSLQEPK Trigger: CTTGGGCTCTTGCAAACTAGGGGTAACCCATGGTCACAGGGCCCTTCTGGCCCTTACCTGTGTGGCGTCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| 3UTR TCA 72 bp | TTACCCCAATTTCCTCTGTGCTTTGCCCCAATCGTATaGCGCCACACAGGTAAGGGCCAGAAGGGCCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: LPQFPLCFAPIV*RHTGKGQKGPV Trigger: CACAGGGCCCTTCTGGCCCTTACCTGTGTGGCGTCATACGATTGGGGCAAAGCACAGAGGAAATTGGGGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| 3UTR CCA 72 bp | CAGAATAGGCAAACCCATAAACAGGAAGTCCACTGGTaGTTGCTAGGGACAGGGAGGAGGGAGGAAACGGGG | + |
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Preference number: 3 (lower is better) Translates to: QNRQTHKQEVHW*LLGTGRREETG Trigger: CCCCGTTTCCTCCCTCCTCCCTGTCCCTAGCAACCACCAGTGGACTTCCTGTTTATGGGTTTGCCTATTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305536.11 |
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| 3UTR CCA 72 bp | ATCCAGAATAGGCAAACCCATAAACAGGAAGTCCACTaGTGGTTGCTAGGGACAGGGAGGAGGGAGGAAACG | + |
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Preference number: 3 (lower is better) Translates to: IQNRQTHKQEVH*WLLGTGRREET Trigger: CGTTTCCTCCCTCCTCCCTGTCCCTAGCAACCACCAGTGGACTTCCTGTTTATGGGTTTGCCTATTCTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305536.11 |
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| 3UTR-3UTR CAA 90 bp | AGTCCACTGGTGGTTGCTAGGGACAGGGAGGAGGGAGGAAACGGGGAGCTCTTGCCAAATGCCACTGAATaGTTCCCTTTAAAATGGTTA | + |
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Preference number: 3 (lower is better) Translates to: SPLVVARDREEGGNGELLPNATE*FPLKWL Trigger: TAACCATTTTAAAGGGAACAATTCAGTGGCATTTGG...CAAGAGCTCCCCGTTTCCTCCCTCCTCCCTGTCCCTAGCAACCACCAGTGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305536.11 |
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| 3UTR TCA 72 bp | ACAGGTCTCCTATTCATTCTTGTTCCCTTCGGGCTGTaGTTCTCAGCCTCCAGGCAGAGATTGCCTTTGCTC | + |
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Preference number: 3 (lower is better) Translates to: TGLLFILVPFGL*FSASRQRLPLL Trigger: GAGCAAAGGCAATCTCTGCCTGGAGGCTGAGAATCACAGCCCGAAGGGAACAAGAATGAATAGGAGACCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| 3UTR-3UTR CAA 90 bp | ATATACAGGTCTCCTATTCATTCTTGTTCCCTTCGGGCTGTGATTCTCAGCCTCAATTTCCTCTGTGCTTaGCCCCAATCGTATGACGCC | + |
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Preference number: 3 (lower is better) Translates to: IYRSPIHSCSLRAVILSLNFLCA*PQSYDA Trigger: GGCGTCATACGATTGGGGCAAAGCACAGAGGAAATT...GAGGCTGAGAATCACAGCCCGAAGGGAACAAGAATGAATAGGAGACCTGTATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| 3UTR-3UTR CAA 90 bp | AGCAGAATGAAGAATATACAGGTCTCCTATTCATTCTTGTTCCCTTCGGGCTGTGCCTCCAGGCAGAGATaGCCTTTGCTCACTAACCTT | + |
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Preference number: 3 (lower is better) Translates to: SRMKNIQVSYSFLFPSGCASRQR*PLLTNL Trigger: AAGGTTAGTGAGCAAAGGCAATCTCTGCCTGGAGGC...ACAGCCCGAAGGGAACAAGAATGAATAGGAGACCTGTATATTCTTCATTCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| 3UTR GCA 72 bp | GGCTGTGATTCTCAGCCTCCAGGCAGAGATTGCCTTTaGTCACTAACCTTACACTCATCGAGAAACAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: GCDSQPPGRDCL*SLTLHSSRNKE Trigger: TTCTTTGTTTCTCGATGAGTGTAAGGTTAGTGAGCAAAGGCAATCTCTGCCTGGAGGCTGAGAATCACAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| 3UTR GCA 72 bp | GTGAAAAACAACAGAAATAGACTAGGATCCCCAAGATaGCCTCCCAAATTAACAAACCTCTTGGATCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: VKNNRNRLGSPR*PPKLTNLLDLP Trigger: TGGGAGATCCAAGAGGTTTGTTAATTTGGGAGGGCATCTTGGGGATCCTAGTCTATTTCTGTTGTTTTTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| CDS-3UTR CCA 90 bp | GTCCACTGGTGGTTGCTAGGGACAGGGAGGAGGGAGGAAACGGGGAGCTCTTGTCAGGAAGTCCACTGGTaGTTGCTAGGGACAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VHWWLLGTGRREETGSSCQEVHW*LLGTGR Trigger: CCTCCCTGTCCCTAGCAACCACCAGTGGACTTCCTG...ACAAGAGCTCCCCGTTTCCTCCCTCCTCCCTGTCCCTAGCAACCACCAGTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305536.11 |
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| CDS-3UTR GCA 90 bp | CAGGTCTCCTATTCATTCTTGTTCCCTTCGGGCTGTGATTCTCAGCCTCCAGGCCTCCAGCCCTCCCCATaGAGGGATGCCATTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: QVSYSFLFPSGCDSQPPGLQPSP*RDAIQP Trigger: AGGCTGAATGGCATCCCTGCATGGGGAGGGCTGGAG...GCCTGGAGGCTGAGAATCACAGCCCGAAGGGAACAAGAATGAATAGGAGACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| CDS-3UTR TCA 90 bp | CAGGTCTCCTATTCATTCTTGTTCCCTTCGGGCTGTGATTCTCAGCCTCCAGGCAGTCTAGGCCCAGGCTaGACAAGCCTCAGTGAAAAA | + |
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Preference number: 4 (lower is better) Translates to: QVSYSFLFPSGCDSQPPGSLGPG*TSLSEK Trigger: TTTTTCACTGAGGCTTGTTCAGCCTGGGCCTAGACT...GCCTGGAGGCTGAGAATCACAGCCCGAAGGGAACAAGAATGAATAGGAGACCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| CDS-3UTR GCA 90 bp | GTCCACTGGTGGTTGCTAGGGACAGGGAGGAGGGAGGAAACGGGGAGCTCTTGTGACATTAAAAAGTTCTaGAAACAGGAAGGTTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: VHWWLLGTGRREETGSSCDIKKF*KQEGLG Trigger: GCCCAAACCTTCCTGTTTGCAGAACTTTTTAATGTC...ACAAGAGCTCCCCGTTTCCTCCCTCCTCCCTGTCCCTAGCAACCACCAGTGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305536.11 |
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| CDS-3UTR TCA 90 bp | CAGAAGCTCCAGCCCTCCCCATGCAGGGATGCCATTCAGCCTAGAGTGAAAATATCAGGAGGCAGGAAATaGAAGGACACTTACTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: QKLQPSPCRDAIQPRVKISGGRK*KDTYCE Trigger: CTCACAGTAAGTGTCCTTTCATTTCCTGCCTCCTGA...TATTTTCACTCTAGGCTGAATGGCATCCCTGCATGGGGAGGGCTGGAGCTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| CDS-3UTR TCA 90 bp | CCAGGCAGAGATTGCCTTTGCTCACTAACCTTACACTCATCGAGAAACAAAGAAGCCAGAAGGGCCCTGTaGCCATGGGTTACCCCTAGT | + |
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Preference number: 4 (lower is better) Translates to: PGRDCLCSLTLHSSRNKEARRAL*PWVTPS Trigger: ACTAGGGGTAACCCATGGTCACAGGGCCCTTCTGGC...TTCTTTGTTTCTCGATGAGTGTAAGGTTAGTGAGCAAAGGCAATCTCTGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| CDS-3UTR GCA 90 bp | GACCATGGGTTACCCCTAGTTTGCAAGAGCCCAAGGAGTCCAGTCTGTTCCAGTCCTCCAGGCAGAGATTaGCTTTGCTCACTAACCTTA | + |
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Preference number: 4 (lower is better) Translates to: DHGLPLVCKSPRSPVCSSPPGRD*LCSLTL Trigger: TAAGGTTAGTGAGCAAAGGCAATCTCTGCCTGGAGG...ACTGGAACAGACTGGACTCCTTGGGCTCTTGCAAACTAGGGGTAACCCATGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| CDS-3UTR TCA 90 bp | AGCAGAATGAAGAATATACAGGTCTCCTATTCATTCTTGTTCCCTTCGGGCTGTGTTCCCTTCGGGCTGTaGTTCTCAGCCTCCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: SRMKNIQVSYSFLFPSGCVPFGL*FSASRQ Trigger: CTGCCTGGAGGCTGAGAATCACAGCCCGAAGGGAAC...ACAGCCCGAAGGGAACAAGAATGAATAGGAGACCTGTATATTCTTCATTCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| CDS-3UTR TCA 90 bp | CCAGGCAGAGATTGCCTTTGCTCACTAACCTTACACTCATCGAGAAACAAAGAATTTGCCCCAATCGTATaGCGCCACACAGGTAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PGRDCLCSLTLHSSRNKEFAPIV*RHTGKG Trigger: GCCCTTACCTGTGTGGCGTCATACGATTGGGGCAAA...TTCTTTGTTTCTCGATGAGTGTAAGGTTAGTGAGCAAAGGCAATCTCTGCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| CDS-3UTR CCA 90 bp | GAACTAGACAGAGGCAATGGTTACACAACACTGTGGATGTTCAGTACCAAATGCAAACAGGAAGTCCACTaGTGGTTGCTAGGGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: ELDRGNGYTTLWMFSTKCKQEVH*WLLGTG Trigger: CCCTGTCCCTAGCAACCACCAGTGGACTTCCTGTTT...GCATTTGGTACTGAACATCCACAGTGTTGTGTAACCATTGCCTCTGTCTAGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305536.11 |
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| 3UTR CAA 72 bp | GGATCCCCAAGATGCCCTCCCAAATTAACAAACCTCTaGGATCTCCCACAGAACATTCTAGAACCATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GSPRCPPKLTNL*DLPQNILEPCP Trigger: AGGACATGGTTCTAGAATGTTCTGTGGGAGATCCAAGAGGTTTGTTAATTTGGGAGGGCATCTTGGGGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| 3UTR CAA 72 bp | AGCAGAATGAAGAATATACAGGTCTCCTATTCATTCTaGTTCCCTTCGGGCTGTGATTCTCAGCCTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SRMKNIQVSYSF*FPSGCDSQPPG Trigger: GCCTGGAGGCTGAGAATCACAGCCCGAAGGGAACAAGAATGAATAGGAGACCTGTATATTCTTCATTCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| CDS-3UTR GCA 90 bp | AGAATATACAGGTCTCCTATTCATTCTTGTTCCCTTCGGGCTGTGATTCTCAGCCTAGGATCCCCAAGATaGCCTCCCAAATTAACAAAC | + |
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Preference number: 4 (lower is better) Translates to: RIYRSPIHSCSLRAVILSLGSPR*PPKLTN Trigger: GTTTGTTAATTTGGGAGGGCATCTTGGGGATCCTAG...GCTGAGAATCACAGCCCGAAGGGAACAAGAATGAATAGGAGACCTGTATATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| CDS-3UTR GCA 90 bp | AGCAGAATGAAGAATATACAGGTCTCCTATTCATTCTTGTTCCCTTCGGGCTGTGGCAGAGATTGCCTTTaGTCACTAACCTTACACTCA | + |
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Preference number: 4 (lower is better) Translates to: SRMKNIQVSYSFLFPSGCGRDCL*SLTLHS Trigger: TGAGTGTAAGGTTAGTGAGCAAAGGCAATCTCTGCC...ACAGCCCGAAGGGAACAAGAATGAATAGGAGACCTGTATATTCTTCATTCTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| CDS-3UTR CCA 90 bp | GAACTAGACAGAGGCAATGGTTACACAACACTGTGGATGTTCAGTACCAAATGCACTAGACAGAGGCAATaGTTACACAACACTGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: ELDRGNGYTTLWMFSTKCTRQRQ*LHNTVD Trigger: ATCCACAGTGTTGTGTAACCATTGCCTCTGTCTAGT...GCATTTGGTACTGAACATCCACAGTGTTGTGTAACCATTGCCTCTGTCTAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305536.11 |
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| CDS-3UTR TCA 90 bp | GTATTACAGAAACAAAGTACTCTGTCGACTCAGGAGGCAGGAAATGAAAGGACACTGAACAAGCCTCAGTaGAAAACAACAGAAATAGAC | + |
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Preference number: 4 (lower is better) Translates to: VLQKQSTLSTQEAGNERTLNKPQ*KTTEID Trigger: GTCTATTTCTGTTGTTTTTCACTGAGGCTTGTTCAG...TGTCCTTTCATTTCCTGCCTCCTGAGTCGACAGAGTACTTTGTTTCTGTAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| CDS-3UTR TCA 90 bp | TTGCTCACTAACCTTACACTCATCGAGAAACAAAGAAAGCAAACTACGACCTTCAACACCTCAGCAGAATaGAGAATATACAGGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LLTNLTLIEKQRKQTTTFNTSAE*RIYRSP Trigger: AGGAGACCTGTATATTCTTCATTCTGCTGAGGTGTT...GAAGGTCGTAGTTTGCTTTCTTTGTTTCTCGATGAGTGTAAGGTTAGTGAGCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| CDS-3UTR CCA 90 bp | GAAACGGGGAGCTCTTGTTTAATGGCTACAGGGTTTCATTTTGGGATGATAAAAGGTTACACAACACTGTaGATGTTCAGTACCAAATGC | + |
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Preference number: 4 (lower is better) Translates to: ETGSSCLMATGFHFGMIKGYTTL*MFSTKC Trigger: GCATTTGGTACTGAACATCCACAGTGTTGTGTAACC...TTTTATCATCCCAAAATGAAACCCTGTAGCCATTAAACAAGAGCTCCCCGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000305536.11 |
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| CDS TCA 90 bp | GTGGACCACCCCCAGTGGCCCGCTGCTCCTTCCTCAAAAGGAAGCTaGCGCCTTACTTCATCTCCTCGGGTTCGCGCTCAGCACTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: VDHPQWPAAPSSKGS*RLTSSPRVRAQHSG Trigger: TCCTGAGTGCTGAGCGCGAACCCGAGGAGATGAAGTAAGGCGTCAGCTTCCTTTTGAGGAAGGAGCAGCGGGCCACTGGGGGTGGTCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000469953.1 |
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| CDS GCA 90 bp | ACGCTCTACCACACCAGTCCCGGTGGACCACCCCCAGTGGCCCGCTaGTCCTTCCTCAAAAGGAAGCTGACGCCTTACTTCATCTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: TLYHTSPGGPPPVAR*SFLKRKLTPYFISS Trigger: CGAGGAGATGAAGTAAGGCGTCAGCTTCCTTTTGAGGAAGGAGCAGCGGGCCACTGGGGGTGGTCCACCGGGACTGGTGTGGTAGAGCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000469953.1 |
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| CDS-3UTR CAA 90 bp | GAAGTCCACTGGTGGTTGCTAGGGACAGGGAGGAGGGAGGAAACGGGGAGCTCTGAAGTCCACTGGTGGTaGCTAGGGACAGGGAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: EVHWWLLGTGRREETGSSEVHWW*LGTGRR Trigger: CCTCCTCCCTGTCCCTAGCAACCACCAGTGGACTTC...AGAGCTCCCCGTTTCCTCCCTCCTCCCTGTCCCTAGCAACCACCAGTGGACTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305536.11 |
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| CDS-3UTR CAA 90 bp | GTCCACTGGTGGTTGCTAGGGACAGGGAGGAGGGAGGAAACGGGGAGCTCTTGTGGAAACGGGGAGCTCTaGTTTAATGGCTACAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: VHWWLLGTGRREETGSSCGNGEL*FNGYRV Trigger: AACCCTGTAGCCATTAAACAAGAGCTCCCCGTTTCC...ACAAGAGCTCCCCGTTTCCTCCCTCCTCCCTGTCCCTAGCAACCACCAGTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305536.11 |
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| CDS-3UTR CAA 90 bp | AAGAATATACAGGTCTCCTATTCATTCTTGTTCCCTTCGGGCTGTGATTCTCAGTGGGTTACCCCTAGTTaGCAAGAGCCCAAGGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: KNIQVSYSFLFPSGCDSQWVTPS*QEPKES Trigger: GGACTCCTTGGGCTCTTGCAAACTAGGGGTAACCCA...CTGAGAATCACAGCCCGAAGGGAACAAGAATGAATAGGAGACCTGTATATTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| CDS-3UTR CAA 90 bp | GATGCCACAAAATGTATTACAGAAACAAAGTACTCTGTCGACTCAGGAGGCAGGGCCTCCAGGCAGAGATaGCCTTTGCTCACTAACCTT | + |
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Preference number: 5 (lower is better) Translates to: DATKCITETKYSVDSGGRASRQR*PLLTNL Trigger: AAGGTTAGTGAGCAAAGGCAATCTCTGCCTGGAGGC...CCTGCCTCCTGAGTCGACAGAGTACTTTGTTTCTGTAATACATTTTGTGGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| CDS-3UTR CAA 90 bp | ATATACAGGTCTCCTATTCATTCTTGTTCCCTTCGGGCTGTGATTCTCAGCCTCAGGCAGAGATTGCCTTaGCTCACTAACCTTACACTC | + |
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Preference number: 5 (lower is better) Translates to: IYRSPIHSCSLRAVILSLRQRLP*LTNLTL Trigger: GAGTGTAAGGTTAGTGAGCAAAGGCAATCTCTGCCT...GAGGCTGAGAATCACAGCCCGAAGGGAACAAGAATGAATAGGAGACCTGTATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| CDS-3UTR CAA 90 bp | CAGAGATTGCCTTTGCTCACTAACCTTACACTCATCGAGAAACAAAGAAAGCAAAATTTCCTCTGTGCTTaGCCCCAATCGTATGACGCC | + |
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Preference number: 5 (lower is better) Translates to: QRLPLLTNLTLIEKQRKQNFLCA*PQSYDA Trigger: GGCGTCATACGATTGGGGCAAAGCACAGAGGAAATT...TTGCTTTCTTTGTTTCTCGATGAGTGTAAGGTTAGTGAGCAAAGGCAATCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| CDS-3UTR CAA 90 bp | ATGCCACAAAATGTATTACAGAAACAAAGTACTCTGTCGACTCAGGAGGCAGGAGTCTCCTATTCATTCTaGTTCCCTTCGGGCTGTGAT | + |
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Preference number: 5 (lower is better) Translates to: MPQNVLQKQSTLSTQEAGVSYSF*FPSGCD Trigger: ATCACAGCCCGAAGGGAACAAGAATGAATAGGAGAC...TCCTGCCTCCTGAGTCGACAGAGTACTTTGTTTCTGTAATACATTTTGTGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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| CDS CCA 72 bp | CTCGGCCCCGCAGACGCTCTACCACACCAGTCCCGGTaGACCACCCCCAGTGGCCCGCTGCTCCTTCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: LGPADALPHQSR*TTPSGPLLLPQ Trigger: TTGAGGAAGGAGCAGCGGGCCACTGGGGGTGGTCCACCGGGACTGGTGTGGTAGAGCGTCTGCGGGGCCGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000469953.1 |
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| CDS TCA 72 bp | CCCCAGTGGCCCGCTGCTCCTTCCTCAAAAGGAAGCTaGCGCCTTACTTCATCTCCTCGGGTTCGCGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: PQWPAAPSSKGS*RLTSSPRVRAQ Trigger: CTGAGCGCGAACCCGAGGAGATGAAGTAAGGCGTCAGCTTCCTTTTGAGGAAGGAGCAGCGGGCCACTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469953.1 |
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| CDS TCA 72 bp | GAAACAAAGTACTCTGTCGACTCAGGAGGCAGGAAATaGAAGGACACTTACTGTGAGAACACACAGATGATG | + |
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Preference number: 6 (lower is better) Translates to: ETKYSVDSGGRK*KDTYCENTQMM Trigger: CATCATCTGTGTGTTCTCACAGTAAGTGTCCTTTCATTTCCTGCCTCCTGAGTCGACAGAGTACTTTGTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370947.1 |
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