Pregenerated sensors for RBMX (Homo sapiens)
Ensembl gene IDs: ENSG00000147274Ensembl transcript IDs: ENST00000562646.5, ENST00000568578.5
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATTCACTGGCTCGGGATGGACTGGAATGGCTTAAATTGTTAAGTTaGATGGCTTATGGATTGTCATTCTGTTCCAATGGTGCACTGCCA | + |
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Preference number: 1 (lower is better) Translates to: DSLARDGLEWLKLLS*MAYGLSFCSNGALP Trigger: TGGCAGTGCACCATTGGAACAGAATGACAATCCATAAGCCATGCAACTTAACAATTTAAGCCATTCCAGTCCATCCCGAGCCAGTGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| 3UTR-3UTR TCA 90 bp | TGTCTTAAGTGGTGGAAGATTCACTGGCTCGGGATGGACTGGAATGGCTTAAATAGGTGGAGCACTACGTaGGTTACCTGCAGGGTCAAT | + |
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Preference number: 2 (lower is better) Translates to: CLKWWKIHWLGMDWNGLNRWSTT*VTCRVN Trigger: ATTGACCCTGCAGGTAACTCACGTAGTGCTCCACCT...ATTTAAGCCATTCCAGTCCATCCCGAGCCAGTGAATCTTCCACCACTTAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| 3UTR-3UTR CCA 90 bp | TGTCTTAAGTGGTGGAAGATTCACTGGCTCGGGATGGACTGGAATGGCTTAAATTTTCAACTTCATGGCTaGACCTGGGTCATGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: CLKWWKIHWLGMDWNGLNFQLHG*TWVMLP Trigger: AGGCAGCATGACCCAGGTCCAGCCATGAAGTTGAAA...ATTTAAGCCATTCCAGTCCATCCCGAGCCAGTGAATCTTCCACCACTTAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| 3UTR-3UTR CCA 90 bp | TGTCTTAAGTGGTGGAAGATTCACTGGCTCGGGATGGACTGGAATGGCTTAAATTACCTGCAGGGTCAATaGTCAGGTAATATGGCAACA | + |
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Preference number: 2 (lower is better) Translates to: CLKWWKIHWLGMDWNGLNYLQGQ*SGNMAT Trigger: TGTTGCCATATTACCTGACCATTGACCCTGCAGGTA...ATTTAAGCCATTCCAGTCCATCCCGAGCCAGTGAATCTTCCACCACTTAAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| 3UTR-3UTR GCA 90 bp | TGTCTTAAGTGGTGGAAGATTCACTGGCTCGGGATGGACTGGAATGGCTTAAATGTTCCAATGGTGCACTaGCACGTTAAATCCATAAGT | + |
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Preference number: 2 (lower is better) Translates to: CLKWWKIHWLGMDWNGLNVPMVH*HVKSIS Trigger: ACTTATGGATTTAACGTGGCAGTGCACCATTGGAAC...ATTTAAGCCATTCCAGTCCATCCCGAGCCAGTGAATCTTCCACCACTTAAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| 3UTR-3UTR GCA 90 bp | TGTCTTAAGTGGTGGAAGATTCACTGGCTCGGGATGGACTGGAATGGCTTAAATATTCTGTTCCAATGGTaGACTGCCACGTTAAATCCA | + |
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Preference number: 2 (lower is better) Translates to: CLKWWKIHWLGMDWNGLNILFQW*TATLNP Trigger: TGGATTTAACGTGGCAGTGCACCATTGGAACAGAAT...ATTTAAGCCATTCCAGTCCATCCCGAGCCAGTGAATCTTCCACCACTTAAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| 3UTR-3UTR GCA 90 bp | TGTCTTAAGTGGTGGAAGATTCACTGGCTCGGGATGGACTGGAATGGCTTAAATAGAAGGCATTTCCATTaGCTTGAGGTACAGTATGTT | + |
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Preference number: 2 (lower is better) Translates to: CLKWWKIHWLGMDWNGLNRRHFH*LEVQYV Trigger: AACATACTGTACCTCAAGGCAATGGAAATGCCTTCT...ATTTAAGCCATTCCAGTCCATCCCGAGCCAGTGAATCTTCCACCACTTAAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| 3UTR-3UTR CCA 90 bp | TGTCTTAAGTGGTGGAAGATTCACTGGCTCGGGATGGACTGGAATGGCTTAAATCACAGCCTAATAAACTaGCTCACGAACCTAAAAACT | + |
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Preference number: 2 (lower is better) Translates to: CLKWWKIHWLGMDWNGLNHSLIN*LTNLKT Trigger: AGTTTTTAGGTTCGTGAGCCAGTTTATTAGGCTGTG...ATTTAAGCCATTCCAGTCCATCCCGAGCCAGTGAATCTTCCACCACTTAAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| 3UTR CCA 72 bp | GTGGTGGAAGATTCACTGGCTCGGGATGGACTGGAATaGCTTAAATTGTTAAGTTGCATGGCTTATGGATTG | + |
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Preference number: 3 (lower is better) Translates to: VVEDSLARDGLE*LKLLSCMAYGL Trigger: CAATCCATAAGCCATGCAACTTAACAATTTAAGCCATTCCAGTCCATCCCGAGCCAGTGAATCTTCCACCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| 3UTR-3UTR CAA 90 bp | TGTCTTAAGTGGTGGAAGATTCACTGGCTCGGGATGGACTGGAATGGCTTAAATGACGGAAAAACTAGTTaGCTTTGCTTACCATCTTTG | + |
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Preference number: 3 (lower is better) Translates to: CLKWWKIHWLGMDWNGLNDGKTS*LCLPSL Trigger: CAAAGATGGTAAGCAAAGCAAACTAGTTTTTCCGTC...ATTTAAGCCATTCCAGTCCATCCCGAGCCAGTGAATCTTCCACCACTTAAGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| 3UTR GCA 72 bp | GCTCGGGATGGACTGGAATGGCTTAAATTGTTAAGTTaGATGGCTTATGGATTGTCATTCTGTTCCAATGGT | + |
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Preference number: 3 (lower is better) Translates to: ARDGLEWLKLLS*MAYGLSFCSNG Trigger: ACCATTGGAACAGAATGACAATCCATAAGCCATGCAACTTAACAATTTAAGCCATTCCAGTCCATCCCGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR GCA 90 bp | TGTCTTAAGTGGTGGAAGATTCACTGGCTCGGGATGGACTGGAATGGCTTAAATGCTGGACCTGGGTCATaGTGCCTCAGGTTTTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: CLKWWKIHWLGMDWNGLNAGPGS*CLRFCF Trigger: AAAGCAAAACCTGAGGCAGCATGACCCAGGTCCAGC...ATTTAAGCCATTCCAGTCCATCCCGAGCCAGTGAATCTTCCACCACTTAAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR CCA 90 bp | CCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTAAAAACCTTCATGGCTGGACCTaGGTCATGCTGCCTCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: PLKASTTQPNKLAHEPKNLHGWT*VMLPQV Trigger: AACCTGAGGCAGCATGACCCAGGTCCAGCCATGAAG...GTTTTTAGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR TCA 90 bp | CCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTAAAAACAGGTGGAGCACTACGTaGGTTACCTGCAGGGTCAAT | + |
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Preference number: 4 (lower is better) Translates to: PLKASTTQPNKLAHEPKNRWSTT*VTCRVN Trigger: ATTGACCCTGCAGGTAACTCACGTAGTGCTCCACCT...GTTTTTAGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000562646.5 ENST00000568578.5 |
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| CDS-3UTR CCA 90 bp | AACATCCCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTTGGTGGAAGATTCACTaGCTCGGGATGGACTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: NIPLKASTTQPNKLAHEPWWKIH*LGMDWN Trigger: ATTCCAGTCCATCCCGAGCCAGTGAATCTTCCACCA...AGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGGGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR CCA 90 bp | TGTCTTAAGTGGTGGAAGATTCACTGGCTCGGGATGGACTGGAATGGCTTAAATACTTTCTCAACTGGGTaGGAGGTTTTAAACTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: CLKWWKIHWLGMDWNGLNTFSTG*EVLNSA Trigger: GGCAGAGTTTAAAACCTCCCACCCAGTTGAGAAAGT...ATTTAAGCCATTCCAGTCCATCCCGAGCCAGTGAATCTTCCACCACTTAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR GCA 90 bp | AACATCCCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTGCCATAACAGGGATTTaGTCATCTGCTGAGATATGG | + |
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Preference number: 4 (lower is better) Translates to: NIPLKASTTQPNKLAHEPAITGI*SSAEIW Trigger: CCATATCTCAGCAGATGAGCAAATCCCTGTTATGGC...AGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGGGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000562646.5 ENST00000568578.5 |
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| CDS-3UTR CCA 90 bp | AACATCCCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTACTTTCTCAACTGGGTaGGAGGTTTTAAACTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: NIPLKASTTQPNKLAHEPTFSTG*EVLNSA Trigger: GGCAGAGTTTAAAACCTCCCACCCAGTTGAGAAAGT...AGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGGGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000562646.5 ENST00000568578.5 |
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| CDS-3UTR CCA 90 bp | AACATCCCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTTACCTGCAGGGTCAATaGTCAGGTAATATGGCAACA | + |
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Preference number: 4 (lower is better) Translates to: NIPLKASTTQPNKLAHEPYLQGQ*SGNMAT Trigger: TGTTGCCATATTACCTGACCATTGACCCTGCAGGTA...AGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGGGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000562646.5 ENST00000568578.5 |
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| CDS-3UTR CCA 90 bp | AGCCTAATAAACTGGCTCACGAACCTAAAAACTCAAGCTGGTGATACTAAAGACTTTCAACTTCATGGCTaGACCTGGGTCATGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: SLINWLTNLKTQAGDTKDFQLHG*TWVMLP Trigger: AGGCAGCATGACCCAGGTCCAGCCATGAAGTTGAAA...GTCTTTAGTATCACCAGCTTGAGTTTTTAGGTTCGTGAGCCAGTTTATTAGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR TCA 90 bp | TGTCTTAAGTGGTGGAAGATTCACTGGCTCGGGATGGACTGGAATGGCTTAAATGATTTGCTCATCTGCTaGGATATGGAATTGGATTCA | + |
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Preference number: 4 (lower is better) Translates to: CLKWWKIHWLGMDWNGLNDLLIC*DMELDS Trigger: TGAATCCAATTCCATATCTCAGCAGATGAGCAAATC...ATTTAAGCCATTCCAGTCCATCCCGAGCCAGTGAATCTTCCACCACTTAAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR CCA 90 bp | AACATCCCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTGTCATTCTGTTCCAATaGTGCACTGCCACGTTAAAT | + |
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Preference number: 4 (lower is better) Translates to: NIPLKASTTQPNKLAHEPVILFQ*CTATLN Trigger: ATTTAACGTGGCAGTGCACCATTGGAACAGAATGAC...AGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGGGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR TCA 90 bp | TGTCTTAAGTGGTGGAAGATTCACTGGCTCGGGATGGACTGGAATGGCTTAAATGATAAGTTGCAATTTTaGACTGTAGAACTTGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: CLKWWKIHWLGMDWNGLNDKLQF*TVELAF Trigger: GAAGGCAAGTTCTACAGTTCAAAATTGCAACTTATC...ATTTAAGCCATTCCAGTCCATCCCGAGCCAGTGAATCTTCCACCACTTAAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR TCA 90 bp | AACATCCCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTGATTTGCTCATCTGCTaGGATATGGAATTGGATTCA | + |
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Preference number: 4 (lower is better) Translates to: NIPLKASTTQPNKLAHEPDLLIC*DMELDS Trigger: TGAATCCAATTCCATATCTCAGCAGATGAGCAAATC...AGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGGGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000562646.5 ENST00000568578.5 |
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| CDS-3UTR TCA 90 bp | CCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTAAAAACGCATTTCCATTGCCTTaGGGTACAGTATGTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: PLKASTTQPNKLAHEPKNAFPLP*GTVCFT Trigger: AGTGAAACATACTGTACCTCAAGGCAATGGAAATGC...GTTTTTAGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR GCA 90 bp | AACATCCCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTAGAAGGCATTTCCATTaGCTTGAGGTACAGTATGTT | + |
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Preference number: 4 (lower is better) Translates to: NIPLKASTTQPNKLAHEPRRHFH*LEVQYV Trigger: AACATACTGTACCTCAAGGCAATGGAAATGCCTTCT...AGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGGGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR CCA 90 bp | AGCCTAATAAACTGGCTCACGAACCTAAAAACTCAAGCTGGTGATACTAAAGACTACCTGCAGGGTCAATaGTCAGGTAATATGGCAACA | + |
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Preference number: 4 (lower is better) Translates to: SLINWLTNLKTQAGDTKDYLQGQ*SGNMAT Trigger: TGTTGCCATATTACCTGACCATTGACCCTGCAGGTA...GTCTTTAGTATCACCAGCTTGAGTTTTTAGGTTCGTGAGCCAGTTTATTAGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR GCA 90 bp | AGCCTAATAAACTGGCTCACGAACCTAAAAACTCAAGCTGGTGATACTAAAGACATTCTGTTCCAATGGTaGACTGCCACGTTAAATCCA | + |
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Preference number: 4 (lower is better) Translates to: SLINWLTNLKTQAGDTKDILFQW*TATLNP Trigger: TGGATTTAACGTGGCAGTGCACCATTGGAACAGAAT...GTCTTTAGTATCACCAGCTTGAGTTTTTAGGTTCGTGAGCCAGTTTATTAGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR CCA 90 bp | CCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTAAAAACCACAGCCTAATAAACTaGCTCACGAACCTAAAAACT | + |
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Preference number: 4 (lower is better) Translates to: PLKASTTQPNKLAHEPKNHSLIN*LTNLKT Trigger: AGTTTTTAGGTTCGTGAGCCAGTTTATTAGGCTGTG...GTTTTTAGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000562646.5 ENST00000568578.5 |
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| CDS-3UTR CCA 90 bp | CCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTAAAAACGTTTACTTTCTCAACTaGGTGGGAGGTTTTAAACTC | + |
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Preference number: 4 (lower is better) Translates to: PLKASTTQPNKLAHEPKNVYFLN*VGGFKL Trigger: GAGTTTAAAACCTCCCACCCAGTTGAGAAAGTAAAC...GTTTTTAGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000562646.5 ENST00000568578.5 |
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| CDS-3UTR CCA 90 bp | CCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTAAAAACATGTCAAGTTTGCAATaGCTTACAGGGGTAAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: PLKASTTQPNKLAHEPKNMSSLQ*LTGVKR Trigger: CCTTTTTACCCCTGTAAGCCATTGCAAACTTGACAT...GTTTTTAGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR CCA 90 bp | AACATCCCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTAAGTTGCATGGCTTATaGATTGTCATTCTGTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: NIPLKASTTQPNKLAHEPKLHGL*IVILFQ Trigger: TTGGAACAGAATGACAATCCATAAGCCATGCAACTT...AGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGGGATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR CCA 90 bp | AGCCTAATAAACTGGCTCACGAACCTAAAAACTCAAGCTGGTGATACTAAAGACCGGGATGGACTGGAATaGCTTAAATTGTTAAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: SLINWLTNLKTQAGDTKDRDGLE*LKLLSC Trigger: GCAACTTAACAATTTAAGCCATTCCAGTCCATCCCG...GTCTTTAGTATCACCAGCTTGAGTTTTTAGGTTCGTGAGCCAGTTTATTAGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR CCA 90 bp | CCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTAAAAACACTATTTGTCTTAAGTaGTGGAAGATTCACTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PLKASTTQPNKLAHEPKNTICLK*WKIHWL Trigger: GAGCCAGTGAATCTTCCACCACTTAAGACAAATAGT...GTTTTTAGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR TCA 90 bp | CCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTAAAAACGATAAGTTGCAATTTTaGACTGTAGAACTTGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: PLKASTTQPNKLAHEPKNDKLQF*TVELAF Trigger: GAAGGCAAGTTCTACAGTTCAAAATTGCAACTTATC...GTTTTTAGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000562646.5 ENST00000568578.5 |
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| CDS-3UTR GCA 90 bp | AACATCCCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTTTCCAAATAAGACAGTaGCATAACTACACGACAAAA | + |
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Preference number: 4 (lower is better) Translates to: NIPLKASTTQPNKLAHEPFQIRQ*HNYTTK Trigger: TTTTGTCGTGTAGTTATGGCACTGTCTTATTTGGAA...AGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGGGATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR GCA 90 bp | CCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTAAAAACACGGAAAAACTAGTTTaGTTTGCTTACCATCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: PLKASTTQPNKLAHEPKNTEKLV*FAYHLC Trigger: GCAAAGATGGTAAGCAAAGCAAACTAGTTTTTCCGT...GTTTTTAGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR CCA 90 bp | AGCCTAATAAACTGGCTCACGAACCTAAAAACTCAAGCTGGTGATACTAAAGACCACAGCCTAATAAACTaGCTCACGAACCTAAAAACT | + |
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Preference number: 4 (lower is better) Translates to: SLINWLTNLKTQAGDTKDHSLIN*LTNLKT Trigger: AGTTTTTAGGTTCGTGAGCCAGTTTATTAGGCTGTG...GTCTTTAGTATCACCAGCTTGAGTTTTTAGGTTCGTGAGCCAGTTTATTAGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| 3UTR CAA 72 bp | AGACGGTGTGTATTTCAAGAGGATATTCCAGAGAGCTaGTTATTTTATAGTAGACACTCAGCCACTTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RRCVFQEDIPES*LFYSRHSATFQ Trigger: CTGGAAAGTGGCTGAGTGTCTACTATAAAATAACAAGCTCTCTGGAATATCCTCTTGAAATACACACCGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000562646.5 ENST00000568578.5 |
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| CDS-3UTR GCA 90 bp | CCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTAAAAACTTGAACTGTAGAACTTaGCTTCATATTGCAATGGTA | + |
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Preference number: 4 (lower is better) Translates to: PLKASTTQPNKLAHEPKNLNCRT*LHIAMV Trigger: TACCATTGCAATATGAAGGCAAGTTCTACAGTTCAA...GTTTTTAGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000562646.5 ENST00000568578.5 |
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| CDS-3UTR GCA 90 bp | CCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTAAAAACAGGCAAGTTCAGACTTaGAGCTTAATATATTTCATG | + |
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Preference number: 4 (lower is better) Translates to: PLKASTTQPNKLAHEPKNRQVQT*SLIYFM Trigger: CATGAAATATATTAAGCTGCAAGTCTGAACTTGCCT...GTTTTTAGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR GCA 90 bp | AGCCTAATAAACTGGCTCACGAACCTAAAAACTCAAGCTGGTGATACTAAAGACTTGAACTGTAGAACTTaGCTTCATATTGCAATGGTA | + |
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Preference number: 4 (lower is better) Translates to: SLINWLTNLKTQAGDTKDLNCRT*LHIAMV Trigger: TACCATTGCAATATGAAGGCAAGTTCTACAGTTCAA...GTCTTTAGTATCACCAGCTTGAGTTTTTAGGTTCGTGAGCCAGTTTATTAGGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR CAA 90 bp | TGTCTTAAGTGGTGGAAGATTCACTGGCTCGGGATGGACTGGAATGGCTTAAATAGCCCCAGATCGCCATaGGTAAACAACAGCTCTATT | + |
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Preference number: 5 (lower is better) Translates to: CLKWWKIHWLGMDWNGLNSPRSP*VNNSSI Trigger: AATAGAGCTGTTGTTTACCAATGGCGATCTGGGGCT...ATTTAAGCCATTCCAGTCCATCCCGAGCCAGTGAATCTTCCACCACTTAAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR CAA 90 bp | TGTCTTAAGTGGTGGAAGATTCACTGGCTCGGGATGGACTGGAATGGCTTAAATTGCATGGCTTATGGATaGTCATTCTGTTCCAATGGT | + |
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Preference number: 5 (lower is better) Translates to: CLKWWKIHWLGMDWNGLNCMAYG*SFCSNG Trigger: ACCATTGGAACAGAATGACAATCCATAAGCCATGCA...ATTTAAGCCATTCCAGTCCATCCCGAGCCAGTGAATCTTCCACCACTTAAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR CAA 90 bp | CCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTAAAAACGGCATTTCCATTGCCTaGAGGTACAGTATGTTTCAC | + |
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Preference number: 5 (lower is better) Translates to: PLKASTTQPNKLAHEPKNGISIA*RYSMFH Trigger: GTGAAACATACTGTACCTCAAGGCAATGGAAATGCC...GTTTTTAGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR CAA 90 bp | AACATCCCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTGACGGAAAAACTAGTTaGCTTTGCTTACCATCTTTG | + |
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Preference number: 5 (lower is better) Translates to: NIPLKASTTQPNKLAHEPDGKTS*LCLPSL Trigger: CAAAGATGGTAAGCAAAGCAAACTAGTTTTTCCGTC...AGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGGGATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR CAA 90 bp | CCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTAAAAACATGCTGCCTCAGGTTTaGCTTTTTAAAGACCACTTG | + |
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Preference number: 5 (lower is better) Translates to: PLKASTTQPNKLAHEPKNMLPQV*LFKDHL Trigger: CAAGTGGTCTTTAAAAAGCAAAACCTGAGGCAGCAT...GTTTTTAGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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| CDS-3UTR CAA 90 bp | AACATCCCTTTAAAAGCAAGCACCACACAGCCTAATAAACTGGCTCACGAACCTCTGGAATGGCTTAAATaGTTAAGTTGCATGGCTTAT | + |
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Preference number: 5 (lower is better) Translates to: NIPLKASTTQPNKLAHEPLEWLK*LSCMAY Trigger: ATAAGCCATGCAACTTAACAATTTAAGCCATTCCAG...AGGTTCGTGAGCCAGTTTATTAGGCTGTGTGGTGCTTGCTTTTAAAGGGATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568578.5 |
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