RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBMS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000076067

Ensembl transcript IDs: ENST00000262031.10, ENST00000542360.1, ENST00000550726.5, ENST00000552228.1, ENST00000552247.6, ENST00000552916.5

Found 350 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTTCTACACACCTGAGGGGGAGACGGCGTTGGGATAGGTATGACTaGCTTAAGAGACCACAGGCAAGGGAACAACAGGGGCTCCTGTTC +
Preference number: 1 (lower is better)
Translates to: PSTHLRGRRRWDRYD*LKRPQAREQQGLLF
Trigger: GAACAGGAGCCCCTGTTGTTCCCTTGCCTGTGGTCTCTTAAGCCAGTCATACCTATCCCAACGCCGTCTCCCCCTCAGGTGTGTAGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR GCA 90 bp CTGCCTAAATGTCTGGCTGAGTTGCTGGAGCAAAGGGGGATTCAGTaGATCCAGGTCCTGCCTTGTGAGATGTGGCCCCAGCTTCCTAAG +
Preference number: 1 (lower is better)
Translates to: LPKCLAELLEQRGIQ*IQVLPCEMWPQLPK
Trigger: CTTAGGAAGCTGGGGCCACATCTCACAAGGCAGGACCTGGATGCACTGAATCCCCCTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 90 bp TTGTCCTTCCACAGAAGGAACATTATTTCTGATGTCCTGGTTCCCTaGGCAAAGGGTCCAAGCACACCGGGGCAGGGCAGGTTGCTCTGG +
Preference number: 1 (lower is better)
Translates to: LSFHRRNIISDVLVP*AKGPSTPGQGRLLW
Trigger: CCAGAGCAACCTGCCCTGCCCCGGTGTGCTTGGACCCTTTGCCCAGGGAACCAGGACATCAGAAATAATGTTCCTTCTGTGGAAGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 90 bp GAAGGAGCCTATGTGGATTCAACTAGGTCGCAGCTGCAAAGGCTCTaGGCACAGCAATGTGTAACAGGGAAGAGAGGGGCCATGAAGCCC +
Preference number: 1 (lower is better)
Translates to: EGAYVDSTRSQLQRL*AQQCVTGKRGAMKP
Trigger: GGGCTTCATGGCCCCTCTCTTCCCTGTTACACATTGCTGTGCTCAGAGCCTTTGCAGCTGCGACCTAGTTGAATCCACATAGGCTCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR GCA 90 bp GCATCCAGGTCCTGCCTTGTGAGATGTGGCCCCAGCTTCCTAAGCTaGCACCTCTGTGTTCCTGTCATAGCAAATATGGGACCATCACCA +
Preference number: 1 (lower is better)
Translates to: ASRSCLVRCGPSFLS*HLCVPVIANMGPSP
Trigger: TGGTGATGGTCCCATATTTGCTATGACAGGAACACAGAGGTGGCAGCTTAGGAAGCTGGGGCCACATCTCACAAGGCAGGACCTGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 90 bp AACAGCCCACGGGTTGACATTGGAGTGACAGGCCTCAACTCCCAATaGGTTGACATTGGAGTGACAGGAGTAGGCACTGGAGGCACTAAG +
Preference number: 1 (lower is better)
Translates to: NSPRVDIGVTGLNSQ*VDIGVTGVGTGGTK
Trigger: CTTAGTGCCTCCAGTGCCTACTCCTGTCACTCCAATGTCAACCCATTGGGAGTTGAGGCCTGTCACTCCAATGTCAACCCGTGGGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 90 bp GTCCTTTCCCACCATTGCACAGCACACACCAGAACAATGCCCACCTaGATCCCTCTGAGTACATGTGTGCATTCAGCATGGAGCCACAGC +
Preference number: 1 (lower is better)
Translates to: VLSHHCTAHTRTMPT*IPLSTCVHSAWSHS
Trigger: GCTGTGGCTCCATGCTGAATGCACACATGTACTCAGAGGGATTCAGGTGGGCATTGTTCTGGTGTGTGCTGTGCAATGGTGGGAAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 90 bp GGCAGAGGAGAGGGGAGTGGCAATATCAACAATGGTTTCTATGCGTaGAAGGCCCTTCCTAAACCTCCTACCATAGCAAAGCTCCCCCGG +
Preference number: 1 (lower is better)
Translates to: GRGEGSGNINNGFYA*KALPKPPTIAKLPR
Trigger: CCGGGGGAGCTTTGCTATGGTAGGAGGTTTAGGAAGGGCCTTTCACGCATAGAAACCATTGTTGATATTGCCACTCCCCTCTCCTCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 90 bp GGCAAGGGAACAACAGGGGCTCCTGTTCCATACCCTCTGTGTGGATaGAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTTG +
Preference number: 1 (lower is better)
Translates to: GKGTTGAPVPYPLCG*KGSLVLLPKCLAEL
Trigger: CAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCCATCCACACAGAGGGTATGGAACAGGAGCCCCTGTTGTTCCCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 90 bp AAAAGCTATCTGCCCAGCCAGAGCCCTCTAGAAGGTTGCTGGGCTTaGGGCTATTTTACACTGGATAAGCCCTTCCTGAGTTTGGAAGCA +
Preference number: 1 (lower is better)
Translates to: KSYLPSQSPLEGCWA*GYFTLDKPFLSLEA
Trigger: TGCTTCCAAACTCAGGAAGGGCTTATCCAGTGTAAAATAGCCCCAAGCCCAGCAACCTTCTAGAGGGCTCTGGCTGGGCAGATAGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 90 bp TGTGTATTCATCTTCCCTTCTACACACCTGAGGGGGAGACGGCGTTaGGATAGGTATGACTGGCTTAAGAGACCACAGGCAAGGGAACAA +
Preference number: 1 (lower is better)
Translates to: CVFIFPSTHLRGRRR*DRYDWLKRPQAREQ
Trigger: TTGTTCCCTTGCCTGTGGTCTCTTAAGCCAGTCATACCTATCCCAACGCCGTCTCCCCCTCAGGTGTGTAGAAGGGAAGATGAATACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 90 bp ACCATTGCACAGCACACACCAGAACAATGCCCACCTGAATCCCTCTaGGTACATGTGTGCATTCAGCATGGAGCCACAGCTCTTTCAAGA +
Preference number: 1 (lower is better)
Translates to: TIAQHTPEQCPPESL*VHVCIQHGATALSR
Trigger: TCTTGAAAGAGCTGTGGCTCCATGCTGAATGCACACATGTACTCAGAGGGATTCAGGTGGGCATTGTTCTGGTGTGTGCTGTGCAATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 90 bp CTAGTCTTCAACCAAGTTTGGCTCAAGGGTGTGTTCCCAGGGCTGTaGAGTTGTCTCTTTAGTAAGCCTGGGTCACATCTGTGCTTTCTG +
Preference number: 1 (lower is better)
Translates to: LVFNQVWLKGVFPGL*SCLFSKPGSHLCFL
Trigger: CAGAAAGCACAGATGTGACCCAGGCTTACTAAAGAGACAACTCCACAGCCCTGGGAACACACCCTTGAGCCAAACTTGGTTGAAGACTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 90 bp AAGGAAAACGAATGGAGTGGAGCTGAAGTGGCCCAACCCAGCGCATaGCCTGTGAAGCAGCAAAGTCTGGTCTTCATCTTCAATATGAGT +
Preference number: 1 (lower is better)
Translates to: KENEWSGAEVAQPSA*PVKQQSLVFIFNMS
Trigger: ACTCATATTGAAGATGAAGACCAGACTTTGCTGCTTCACAGGCCATGCGCTGGGTTGGGCCACTTCAGCTCCACTCCATTCGTTTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 90 bp CCCACCCAAAAAGGGTATATGTTGGAGTGGGGACTTCACTCGCGCTaGATATGTATTACCCTCCAGCCTGGAAACTTTGTCTTGGTGCAA +
Preference number: 1 (lower is better)
Translates to: PTQKGYMLEWGLHSR*ICITLQPGNFVLVQ
Trigger: TTGCACCAAGACAAAGTTTCCAGGCTGGAGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTTTGGGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 90 bp CATGCAAAGAGGTGTTTACCCACCCAAAAAGGGTATATGTTGGAGTaGGGACTTCACTCGCGCTGGATATGTATTACCCTCCAGCCTGGA +
Preference number: 1 (lower is better)
Translates to: HAKRCLPTQKGYMLE*GLHSRWICITLQPG
Trigger: TCCAGGCTGGAGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTTTGGGTGGGTAAACACCTCTTTGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 90 bp GTCCACATGCAAAGAGGTGTTTACCCACCCAAAAAGGGTATATGTTaGAGTGGGGACTTCACTCGCGCTGGATATGTATTACCCTCCAGC +
Preference number: 1 (lower is better)
Translates to: VHMQRGVYPPKKGIC*SGDFTRAGYVLPSS
Trigger: GCTGGAGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTTTGGGTGGGTAAACACCTCTTTGCATGTGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 90 bp ACCATTACTTATTACCCTAAGCCGTCACTGCACAGCCTACTCCCCTaGCCTATCACAGCAGGACCTATCTGGAGAGTTCACACTATTCTA +
Preference number: 1 (lower is better)
Translates to: TITYYPKPSLHSLLP*PITAGPIWRVHTIL
Trigger: TAGAATAGTGTGAACTCTCCAGATAGGTCCTGCTGTGATAGGCCAGGGGAGTAGGCTGTGCAGTGACGGCTTAGGGTAATAAGTAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR GCA 90 bp AGCAAAAATCAGAACGGAGACAGAAGCTCACAGTCTGGTTTTAGCTaGCAACTCCTATGGAAGTCCATAGCTGACTCCTATGGAAGGCCT +
Preference number: 1 (lower is better)
Translates to: SKNQNGDRSSQSGFS*QLLWKSIADSYGRP
Trigger: AGGCCTTCCATAGGAGTCAGCTATGGACTTCCATAGGAGTTGGCAGCTAAAACCAGACTGTGAGCTTCTGTCTCCGTTCTGATTTTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 90 bp ATCATCTCAGAGCCTGAGATGAGGAGTAATAACACCGATAGGAGATaGCTAGGCAGGCTCAGAGCCTATAAAGGATTATGCCATCTGAGG +
Preference number: 1 (lower is better)
Translates to: IISEPEMRSNNTDRR*LGRLRAYKGLCHLR
Trigger: CCTCAGATGGCATAATCCTTTATAGGCTCTGAGCCTGCCTAGCCATCTCCTATCGGTGTTATTACTCCTCATCTCAGGCTCTGAGATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 90 bp AGGAACATTCGCTTCCAGCCTTATAAAAATGACAGACTCCCTCTTTaGTGTTTGGTTACCTTCACAGCTATACGCCAGCCACTGAGCAGC +
Preference number: 1 (lower is better)
Translates to: RNIRFQPYKNDRLPL*CLVTFTAIRQPLSS
Trigger: GCTGCTCAGTGGCTGGCGTATAGCTGTGAAGGTAACCAAACACCAAAGAGGGAGTCTGTCATTTTTATAAGGCTGGAAGCGAATGTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 90 bp AAGGTTGCTGGGCTTGGGGCTATTTTACACTGGATAAGCCCTTCCTaGGTTTGGAAGCATCAATTAGAAGACTGCGGCAATTTGTCCTTT +
Preference number: 1 (lower is better)
Translates to: KVAGLGAILHWISPS*VWKHQLEDCGNLSF
Trigger: AAAGGACAAATTGCCGCAGTCTTCTAATTGATGCTTCCAAACTCAGGAAGGGCTTATCCAGTGTAAAATAGCCCCAAGCCCAGCAACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 90 bp GGTACTCCCAAAAAGCTATACCTCAGATGCTGTTGGCCTTGGCAGTaGGAAGAGTTGATAAAAGTCAGTAAGTCCATTCTTCCGGAACTT +
Preference number: 1 (lower is better)
Translates to: GTPKKLYLRCCWPWQ*EELIKVSKSILPEL
Trigger: AAGTTCCGGAAGAATGGACTTACTGACTTTTATCAACTCTTCTCACTGCCAAGGCCAACAGCATCTGAGGTATAGCTTTTTGGGAGTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 90 bp ATCTTCAATATGAGTAATGTCCTCTTACCACTCCTTATCTGTTACTaGCAAGGTCTATTACCCTTTAGAGCCACCAGGCTTCCTGGCCTG +
Preference number: 1 (lower is better)
Translates to: IFNMSNVLLPLLICY*QGLLPFRATRLPGL
Trigger: CAGGCCAGGAAGCCTGGTGGCTCTAAAGGGTAATAGACCTTGTCAGTAACAGATAAGGAGTGGTAAGAGGACATTACTCATATTGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 90 bp CAAGAATCACTCTTGCTATATGCAGAGTTATCAAAAGTCAAAGTCTaGGGAGAATTCAAGGATCCCAGTCCAGTCCTTCCCCAACAGTTG +
Preference number: 1 (lower is better)
Translates to: QESLLLYAELSKVKV*GEFKDPSPVLPQQL
Trigger: CAACTGTTGGGGAAGGACTGGACTGGGATCCTTGAATTCTCCCCAGACTTTGACTTTTGATAACTCTGCATATAGCAAGAGTGATTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 90 bp TTGAAGTGCAAGGGAGTCAAATTCTCCTTTCAGTGCATAAGGGAGTaGCTGGGAGAAGACAAGAGCAGGATTTTATTTCCTAGAAGATGG +
Preference number: 1 (lower is better)
Translates to: LKCKGVKFSFQCIRE*LGEDKSRILFPRRW
Trigger: CCATCTTCTAGGAAATAAAATCCTGCTCTTGTCTTCTCCCAGTCACTCCCTTATGCACTGAAAGGAGAATTTGACTCCCTTGCACTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 90 bp CTCCTATGGAAGTCCATAGCTGACTCCTATGGAAGGCCTACCAAATaGGGAAATTTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAAT +
Preference number: 1 (lower is better)
Translates to: LLWKSIADSYGRPTK*GNFRNLLMRGRIEN
Trigger: ATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAAATTTCCTCATTTGGTAGGCCTTCCATAGGAGTCAGCTATGGACTTCCATAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR GCA 90 bp ATTCAGCATGGAGCCACAGCTCTTTCAAGAATCACTCTTGCTATATaGAGAGTTATCAAAAGTCAAAGTCTGGGGAGAATTCAAGGATCC +
Preference number: 1 (lower is better)
Translates to: IQHGATALSRITLAI*RVIKSQSLGRIQGS
Trigger: GGATCCTTGAATTCTCCCCAGACTTTGACTTTTGATAACTCTGCATATAGCAAGAGTGATTCTTGAAAGAGCTGTGGCTCCATGCTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR GCA 90 bp TGTGTGCATTCAGCATGGAGCCACAGCTCTTTCAAGAATCACTCTTaGTATATGCAGAGTTATCAAAAGTCAAAGTCTGGGGAGAATTCA +
Preference number: 1 (lower is better)
Translates to: CVHSAWSHSSFKNHS*YMQSYQKSKSGENS
Trigger: TGAATTCTCCCCAGACTTTGACTTTTGATAACTCTGCATATAGCAAGAGTGATTCTTGAAAGAGCTGTGGCTCCATGCTGAATGCACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 90 bp GACTGGGAGAAGACAAGAGCAGGATTTTATTTCCTAGAAGATGGGTaGAGTCTTTCTTCAATCTGTCTCCATGTGTATAGAGTCACATCT +
Preference number: 1 (lower is better)
Translates to: DWEKTRAGFYFLEDG*SLSSICLHVYRVTS
Trigger: AGATGTGACTCTATACACATGGAGACAGATTGAAGAAAGACTTCACCCATCTTCTAGGAAATAAAATCCTGCTCTTGTCTTCTCCCAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATCGAATGGAGTGGAGCTaGAGTGGCCCAACCCAGCGC +
Preference number: 2 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHRMEWS*SGPTQR
Trigger: GCGCTGGGTTGGGCCACTTCAGCTCCACTCCATTCG...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CAA 90 bp GCAGAGCCTAGGGGCAAGTTTGGGCCAGATCACCCACCCAGTTTATaGCCCTTGGCTAAGAATGCAAAGCCCCTCATGAGCGCAATGCTG +
Preference number: 2 (lower is better)
Translates to: AEPRGKFGPDHPPSL*PLAKNAKPLMSAML
Trigger: CAGCATTGCGCTCATGAGGGGCTTTGCATTCTTAGCCAAGGGCAATAAACTGGGTGGGTGATCTGGCCCAAACTTGCCCCTAGGCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CCA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATATAGTCCCAGCTACTTaGTGGCCGGGGAAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHIVPAT*WPGKGW
Trigger: CCACCCCTTCCCCGGCCACCAAGTAGCTGGGACTAT...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CAA 90 bp CCTAGGGGCAAGTTTGGGCCAGATCACCCACCCAGTTTATTGCCCTaGGCTAAGAATGCAAAGCCCCTCATGAGCGCAATGCTGCCACTT +
Preference number: 2 (lower is better)
Translates to: PRGKFGPDHPPSLLP*AKNAKPLMSAMLPL
Trigger: AAGTGGCAGCATTGCGCTCATGAGGGGCTTTGCATTCTTAGCCAAGGGCAATAAACTGGGTGGGTGATCTGGCCCAAACTTGCCCCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CCA 90 bp AAAAGGGTATATGTTGGAGTGGGGACTTCACTCGCGCTGGATATGTATTACCCTGTCCCAGCTACTTGGTaGCCGGGGAAGGGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: KRVYVGVGTSLALDMYYPVPATW*PGKGWL
Trigger: CAGCCACCCCTTCCCCGGCCACCAAGTAGCTGGGAC...AGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CAA 90 bp GGATGGAAAGGGTCATTAGTGCTCCTGCCTAAATGTCTGGCTGAGTaGCTGGAGCAAAGGGGGATTCAGTGCATCCAGGTCCTGCCTTGT +
Preference number: 2 (lower is better)
Translates to: GWKGSLVLLPKCLAE*LEQRGIQCIQVLPC
Trigger: ACAAGGCAGGACCTGGATGCACTGAATCCCCCTTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGAGCACTAATGACCCTTTCCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CCA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATAGCCACCAGGCTTCCTaGCCTGGGCAACTCTACAAA +
Preference number: 2 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHSHQAS*PGQLYK
Trigger: TTTGTAGAGTTGCCCAGGCCAGGAAGCCTGGTGGCT...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CAA 90 bp GCAGGTTGCTCTGGACAGTTTAGAGAGCTTTGTCCTTTCCCACCATaGCACAGCACACACCAGAACAATGCCCACCTGAATCCCTCTGAG +
Preference number: 2 (lower is better)
Translates to: AGCSGQFRELCPFPP*HSTHQNNAHLNPSE
Trigger: CTCAGAGGGATTCAGGTGGGCATTGTTCTGGTGTGTGCTGTGCAATGGTGGGAAAGGACAAAGCTCTCTAAACTGTCCAGAGCAACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp AAAAGGGTATATGTTGGAGTGGGGACTTCACTCGCGCTGGATATGTATTACCCTCCCAACCCTTGGCTGTaGGCTGGAAGGCTCCCCTAT +
Preference number: 2 (lower is better)
Translates to: KRVYVGVGTSLALDMYYPPNPWL*AGRLPY
Trigger: ATAGGGGAGCCTTCCAGCTCACAGCCAAGGGTTGGG...AGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp TCTGGGGAGAATTCAAGGATCCCAGTCCAGTCCTTCCCCAACAGTTGCATGAGTTGTCCAGGGTTGGGGTaGAAATTTACCCTAACCCAG +
Preference number: 2 (lower is better)
Translates to: SGENSRIPVQSFPNSCMSCPGLG*KFTLTQ
Trigger: CTGGGTTAGGGTAAATTTTCACCCCAACCCTGGACA...ACTCATGCAACTGTTGGGGAAGGACTGGACTGGGATCCTTGAATTCTCCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR GCA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATCACCTGGCCTTGAAGTaGAAGGGAGTCAAATTCTCC +
Preference number: 2 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHHLALK*KGVKFS
Trigger: GGAGAATTTGACTCCCTTGCACTTCAAGGCCAGGTG...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CAA 90 bp CCTATGGCCAGCCTAATGAACACCTGTCTCTCTATCCTCCATTATTaGCCTTTGTCTGACTGTCTAGTGGAGAGGCACCTGGCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: PMASLMNTCLSILHY*PLSDCLVERHLALK
Trigger: CTTCAAGGCCAGGTGCCTCTCCACTAGACAGTCAGACAAAGGCAAATAATGGAGGATAGAGAGACAGGTGTTCATTAGGCTGGCCATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR GCA 90 bp TCTGGGGAGAATTCAAGGATCCCAGTCCAGTCCTTCCCCAACAGTTGCATGAGTCATTCTTCCGGAACTTaGCAGGGAAGACCTAGTCTT +
Preference number: 2 (lower is better)
Translates to: SGENSRIPVQSFPNSCMSHSSGT*QGRPSL
Trigger: AAGACTAGGTCTTCCCTGGCAAGTTCCGGAAGAATG...ACTCATGCAACTGTTGGGGAAGGACTGGACTGGGATCCTTGAATTCTCCCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CAA 90 bp TGTCCACATGCAAAGAGGTGTTTACCCACCCAAAAAGGGTATATGTaGGAGTGGGGACTTCACTCGCGCTGGATATGTATTACCCTCCAG +
Preference number: 2 (lower is better)
Translates to: CPHAKRCLPTQKGYM*EWGLHSRWICITLQ
Trigger: CTGGAGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTTTGGGTGGGTAAACACCTCTTTGCATGTGGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp AAAAGGGTATATGTTGGAGTGGGGACTTCACTCGCGCTGGATATGTATTACCCTAGATGGAGGTTTCAGTaGGCCAAGATCACGCCACTG +
Preference number: 2 (lower is better)
Translates to: KRVYVGVGTSLALDMYYPRWRFQ*AKITPL
Trigger: CAGTGGCGTGATCTTGGCTCACTGAAACCTCCATCT...AGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR GCA 90 bp TACTCCCAAAAAGCTATACCTCAGATGCTGTTGGCCTTGGCAGTGAGAAGAGTTGCCTACTTAGTGTTCTaGCTTGTTCCTTGCCCAGCC +
Preference number: 2 (lower is better)
Translates to: YSQKAIPQMLLALAVRRVAYLVF*LVPCPA
Trigger: GGCTGGGCAAGGAACAAGGCAGAACACTAAGTAGGC...AACTCTTCTCACTGCCAAGGCCAACAGCATCTGAGGTATAGCTTTTTGGGAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR GCA 90 bp GTGAGGCAGAGGAGAGGGGAGTGGCAATATCAACAATGGTTTCTATGCGTGAAAGTCCTTTCCCACCATTaGACAGCACACACCAGAACA +
Preference number: 2 (lower is better)
Translates to: VRQRRGEWQYQQWFLCVKVLSHH*TAHTRT
Trigger: TGTTCTGGTGTGTGCTGTGCAATGGTGGGAAAGGAC...TTTCACGCATAGAAACCATTGTTGATATTGCCACTCCCCTCTCCTCTGCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR GCA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACTTGCTTTGCCATCTGTaGCTGTACACCGCTGGCCTT +
Preference number: 2 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYLLCHL*LYTAGL
Trigger: AAGGCCAGCGGTGTACAGGCACAGATGGCAAAGCAA...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552916.5
3UTR-3UTR GCA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGGGTCCTGTTCCTGTTaGTTTGCCATCTGTGCCTGT +
Preference number: 2 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYGSCSC*FAICAC
Trigger: ACAGGCACAGATGGCAAAGCAACAGGAACAGGACCC...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552916.5
3UTR-3UTR GCA 90 bp CTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAGGTTCTGTTGGCCGCTaGTCTCCTCGACTGAAACAC +
Preference number: 2 (lower is better)
Translates to: LFHIDEKLRPPCLFKVGEGSVGR*SPRLKH
Trigger: GTGTTTCAGTCGAGGAGAGCAGCGGCCAACAGAACC...TTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552916.5
3UTR-3UTR CCA 90 bp GTGAGGCAGAGGAGAGGGGAGTGGCAATATCAACAATGGTTTCTATGCGTGAAATGGAAGGAGCCTATGTaGATTCAACTAGGTCGCAGC +
Preference number: 2 (lower is better)
Translates to: VRQRRGEWQYQQWFLCVKWKEPM*IQLGRS
Trigger: GCTGCGACCTAGTTGAATCCACATAGGCTCCTTCCA...TTTCACGCATAGAAACCATTGTTGATATTGCCACTCCCCTCTCCTCTGCCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CCA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTAAGCAAGGGATCGGATaGGGCTTGCAAAGCCAACAC +
Preference number: 2 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVKQGIG*GLQSQH
Trigger: GTGTTGGCTTTGCAAGCCCCATCCGATCCCTTGCTT...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552916.5
3UTR CAA 90 bp CATTATTTGCCTTTGTCTGACTGTCTAGTGGAGAGGCACCTGGCCTaGAAGTGCAAGGGAGTCAAATTCTCCTTTCAGTGCATAAGGGAG +
Preference number: 2 (lower is better)
Translates to: HYLPLSDCLVERHLA*KCKGVKFSFQCIRE
Trigger: CTCCCTTATGCACTGAAAGGAGAATTTGACTCCCTTGCACTTCAAGGCCAGGTGCCTCTCCACTAGACAGTCAGACAAAGGCAAATAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR GCA 90 bp AAAAGGGTATATGTTGGAGTGGGGACTTCACTCGCGCTGGATATGTATTACCCTAGCCCTCTAGAAGGTTaGTGGGCTTGGGGCTATTTT +
Preference number: 2 (lower is better)
Translates to: KRVYVGVGTSLALDMYYPSPLEG*WAWGYF
Trigger: AAAATAGCCCCAAGCCCAGCAACCTTCTAGAGGGCT...AGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR GCA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATGCCTATAAAGGATTATaGCATCTGAGGAAAGGACTC +
Preference number: 2 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHAYKGL*HLRKGL
Trigger: GAGTCCTTTCCTCAGATGGCATAATCCTTTATAGGC...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CCA 90 bp GCAGAGTTATCAAAAGTCAAAGTCTGGGGAGAATTCAAGGATCCCAGTCCAGTCTCCCACCTCCAGGCGTaGCAATCAAAACTGTCTCTA +
Preference number: 2 (lower is better)
Translates to: AELSKVKVWGEFKDPSPVSHLQA*QSKLSL
Trigger: TAGAGACAGTTTTGATTGCCACGCCTGGAGGTGGGA...GACTGGACTGGGATCCTTGAATTCTCCCCAGACTTTGACTTTTGATAACTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CCA 90 bp AAAAGGGTATATGTTGGAGTGGGGACTTCACTCGCGCTGGATATGTATTACCCTCCAGGCTTCCTGGCCTaGGCAACTCTACAAATTCTT +
Preference number: 2 (lower is better)
Translates to: KRVYVGVGTSLALDMYYPPGFLA*ATLQIL
Trigger: AAGAATTTGTAGAGTTGCCCAGGCCAGGAAGCCTGG...AGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CAA 90 bp TGCTGGGCTTGGGGCTATTTTACACTGGATAAGCCCTTCCTGAGTTaGGAAGCATCAATTAGAAGACTGCGGCAATTTGTCCTTTACGCT +
Preference number: 2 (lower is better)
Translates to: CWAWGYFTLDKPFLS*EASIRRLRQFVLYA
Trigger: AGCGTAAAGGACAAATTGCCGCAGTCTTCTAATTGATGCTTCCAAACTCAGGAAGGGCTTATCCAGTGTAAAATAGCCCCAAGCCCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp TTTTCTAGCCCCCACCTTCCCAACCCTCAGAGAAGGACAGTAAAGAAATCAGTGTTATTTGCCTTTGTCTaGCTGTCTAGTGGAGAGGCA +
Preference number: 2 (lower is better)
Translates to: FSSPHLPNPQRRTVKKSVLFAFV*LSSGEA
Trigger: TGCCTCTCCACTAGACAGTCAGACAAAGGCAAATAA...CACTGATTTCTTTACTGTCCTTCTCTGAGGGTTGGGAAGGTGGGGGCTAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp TTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAATAGGCAGGAGAACTGCTTaGACCCAGGAGATGGAGGTT +
Preference number: 2 (lower is better)
Translates to: FRNLLMRGRIENVGSTEIGRRTA*TQEMEV
Trigger: AACCTCCATCTCCTGGGTTCAAGCAGTTCTCCTGCC...TATTTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp TTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAATAGGCAGGTGGATCATTTaGGCCCAGGAGTTCAACACC +
Preference number: 2 (lower is better)
Translates to: FRNLLMRGRIENVGSTEIGRWII*AQEFNT
Trigger: GGTGTTGAACTCCTGGGCTCAAATGATCCACCTGCC...TATTTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR GCA 90 bp GTGAGGCAGAGGAGAGGGGAGTGGCAATATCAACAATGGTTTCTATGCGTGAAAGAATTTATTGCTCTTTaGTACCCTAGCTCCCCGTTG +
Preference number: 2 (lower is better)
Translates to: VRQRRGEWQYQQWFLCVKEFIAL*YPSSPL
Trigger: CAACGGGGAGCTAGGGTAGCAAAGAGCAATAAATTC...TTTCACGCATAGAAACCATTGTTGATATTGCCACTCCCCTCTCCTCTGCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CCA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTGTTCCCAGGGCTGTaGAGTTGTCTCTTTAGTAAG +
Preference number: 2 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYVFPGL*SCLFSK
Trigger: CTTACTAAAGAGACAACTCCACAGCCCTGGGAACAC...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CCA 90 bp GCAGAGTTATCAAAAGTCAAAGTCTGGGGAGAATTCAAGGATCCCAGTCCAGTCCTGATTGAGAACTCCTaGTCTGTGAGTGAAGCAGCA +
Preference number: 2 (lower is better)
Translates to: AELSKVKVWGEFKDPSPVLIENS*SVSEAA
Trigger: TGCTGCTTCACTCACAGACCAGGAGTTCTCAATCAG...GACTGGACTGGGATCCTTGAATTCTCCCCAGACTTTGACTTTTGATAACTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CCA 90 bp TTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAATAAACACCGATAGGAGATaGCTAGGCAGGCTCAGAGCC +
Preference number: 2 (lower is better)
Translates to: FRNLLMRGRIENVGSTEINTDRR*LGRLRA
Trigger: GGCTCTGAGCCTGCCTAGCCATCTCCTATCGGTGTT...TATTTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CCA 90 bp AATTTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAATTGGAGGTCAGGAGTTaGACACTAGCCTGGCCAACG +
Preference number: 2 (lower is better)
Translates to: NFRNLLMRGRIENVGSTELEVRS*TLAWPT
Trigger: CGTTGGCCAGGCTAGTGTCCAACTCCTGACCTCCAA...TTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CAA 90 bp ATTCGCTTCCAGCCTTATAAAAATGACAGACTCCCTCTTTGGTGTTaGGTTACCTTCACAGCTATACGCCAGCCACTGAGCAGCTTTCTT +
Preference number: 2 (lower is better)
Translates to: IRFQPYKNDRLPLWC*VTFTAIRQPLSSFL
Trigger: AAGAAAGCTGCTCAGTGGCTGGCGTATAGCTGTGAAGGTAACCAAACACCAAAGAGGGAGTCTGTCATTTTTATAAGGCTGGAAGCGAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CAA 90 bp CACTCGCGCTGGATATGTATTACCCTCCAGCCTGGAAACTTTGTCTaGGTGCAACCCCCTAAACTGTATGTTAAGGTAGAAAAGGAACAT +
Preference number: 2 (lower is better)
Translates to: HSRWICITLQPGNFV*VQPPKLYVKVEKEH
Trigger: ATGTTCCTTTTCTACCTTAACATACAGTTTAGGGGGTTGCACCAAGACAAAGTTTCCAGGCTGGAGGGTAATACATATCCAGCGCGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp GTGAGGCAGAGGAGAGGGGAGTGGCAATATCAACAATGGTTTCTATGCGTGAAAATGGGGTGCATGAGCTaGGAGCTTTACAAAATAACA +
Preference number: 2 (lower is better)
Translates to: VRQRRGEWQYQQWFLCVKMGCMS*ELYKIT
Trigger: TGTTATTTTGTAAAGCTCTCAGCTCATGCACCCCAT...TTTCACGCATAGAAACCATTGTTGATATTGCCACTCCCCTCTCCTCTGCCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp TTTTCTAGCCCCCACCTTCCCAACCCTCAGAGAAGGACAGTAAAGAAATCAGTGTGGATAAGCCCTTCCTaGGTTTGGAAGCATCAATTA +
Preference number: 2 (lower is better)
Translates to: FSSPHLPNPQRRTVKKSVWISPS*VWKHQL
Trigger: TAATTGATGCTTCCAAACTCAGGAAGGGCTTATCCA...CACTGATTTCTTTACTGTCCTTCTCTGAGGGTTGGGAAGGTGGGGGCTAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp AAAAGGGTATATGTTGGAGTGGGGACTTCACTCGCGCTGGATATGTATTACCCTATGGTATATTTTCCTTaGCTGAGGGCTGGAGACTCA +
Preference number: 2 (lower is better)
Translates to: KRVYVGVGTSLALDMYYPMVYFP*LRAGDS
Trigger: TGAGTCTCCAGCCCTCAGTCAAGGAAAATATACCAT...AGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATTCTTCATCTTCAATATaGGTAATGTCCTCTTACCAC +
Preference number: 2 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHSSSSI*VMSSYH
Trigger: GTGGTAAGAGGACATTACTCATATTGAAGATGAAGA...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp AATTTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAGGGTTGACATTGGAGTaGCAGGCCTCAACTCCCAAT +
Preference number: 2 (lower is better)
Translates to: NFRNLLMRGRIENVGSTEGLTLE*QASTPN
Trigger: ATTGGGAGTTGAGGCCTGTCACTCCAATGTCAACCC...TTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp TTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAATAAGAACTCCTGGTCTGTaGGTGAAGCAGCAGATCTTC +
Preference number: 2 (lower is better)
Translates to: FRNLLMRGRIENVGSTEIRTPGL*VKQQIF
Trigger: GAAGATCTGCTGCTTCACTCACAGACCAGGAGTTCT...TATTTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR GCA 90 bp CATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGCTGTTCCTGTTGCTTTaGCATCTGTGCCTGTACACC +
Preference number: 2 (lower is better)
Translates to: HRKLFHIDEKLRPPCLFKLFLLL*HLCLYT
Trigger: GGTGTACAGGCACAGATGGCAAAGCAACAGGAACAG...CTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552916.5
3UTR-3UTR CCA 90 bp GGAAGGATTGGTATAACAAGGCACAAGATTTGGAATTTACCCTTTACAGACTGGAGTTCAACACCAGCCTaGGCAATGTGGCAAAACCCT +
Preference number: 2 (lower is better)
Translates to: GRIGITRHKIWNLPFTDWSSTPA*AMWQNP
Trigger: AGGGTTTTGCCACATTGCCCAGGCTGGTGTTGAACT...CCAGTCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGTTATACCAATCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp TTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGACTTTTTCATATAGATaGGAAGCTGCGACCACCATG +
Preference number: 2 (lower is better)
Translates to: FHIDEKLRPPCLFKVGEKTFSYR*EAATTM
Trigger: CATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGT...CTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262031.10
ENST00000542360.1
ENST00000550726.5
ENST00000552247.6
ENST00000552916.5
3UTR-3UTR TCA 90 bp AATTTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAAGGAGATGGGGTGCATaGGCTGAGAGCTTTACAAAA +
Preference number: 2 (lower is better)
Translates to: NFRNLLMRGRIENVGSTERRWGA*AESFTK
Trigger: TTTTGTAAAGCTCTCAGCTCATGCACCCCATCTCCT...TTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp TGTTTTCTCTTTCTCTCAAAGGCCACTGACAAGAAAGCAGCTATGGTATATTTTAGAGGCACCTGGCCTTaGAGTGCAAGGGAGTCAAAT +
Preference number: 2 (lower is better)
Translates to: CFLFLSKATDKKAAMVYFRGTWP*SARESN
Trigger: ATTTGACTCCCTTGCACTTCAAGGCCAGGTGCCTCT...AAAATATACCATAGCTGCTTTCTTGTCAGTGGCCTTTGAGAGAAAGAGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CCA 90 bp GGAAGGATTGGTATAACAAGGCACAAGATTTGGAATTTACCCTTTACAGACTGGTGTGTGCATTCAGCATaGAGCCACAGCTCTTTCAAG +
Preference number: 2 (lower is better)
Translates to: GRIGITRHKIWNLPFTDWCVHSA*SHSSFK
Trigger: CTTGAAAGAGCTGTGGCTCCATGCTGAATGCACACA...CCAGTCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGTTATACCAATCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CCA 90 bp TTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAATATTATTTCTGATGTCCTaGTTCCCTGGGCAAAGGGTC +
Preference number: 2 (lower is better)
Translates to: FRNLLMRGRIENVGSTEILFLMS*FPGQRV
Trigger: GACCCTTTGCCCAGGGAACCAGGACATCAGAAATAA...TATTTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CCA 90 bp AATTTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAACCTCTAGAAGGTTGCTaGGCTTGGGGCTATTTTACA +
Preference number: 2 (lower is better)
Translates to: NFRNLLMRGRIENVGSTEPLEGC*AWGYFT
Trigger: TGTAAAATAGCCCCAAGCCCAGCAACCTTCTAGAGG...TTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CAA 90 bp ATGTGTGCATTCAGCATGGAGCCACAGCTCTTTCAAGAATCACTCTaGCTATATGCAGAGTTATCAAAAGTCAAAGTCTGGGGAGAATTC +
Preference number: 2 (lower is better)
Translates to: MCAFSMEPQLFQESL*LYAELSKVKVWGEF
Trigger: GAATTCTCCCCAGACTTTGACTTTTGATAACTCTGCATATAGCAAGAGTGATTCTTGAAAGAGCTGTGGCTCCATGCTGAATGCACACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CCA 90 bp GGAAGGATTGGTATAACAAGGCACAAGATTTGGAATTTACCCTTTACAGACTGGTCCTTGACTGAGGGCTaGAGACTCAAAAACAAAAGC +
Preference number: 2 (lower is better)
Translates to: GRIGITRHKIWNLPFTDWSLTEG*RLKNKS
Trigger: GCTTTTGTTTTTGAGTCTCCAGCCCTCAGTCAAGGA...CCAGTCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGTTATACCAATCCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR GCA 90 bp TGTTTTCTCTTTCTCTCAAAGGCCACTGACAAGAAAGCAGCTATGGTATATTTTCCTGGGTCACATCTGTaGTTTCTGAAGCCAAAGTCT +
Preference number: 2 (lower is better)
Translates to: CFLFLSKATDKKAAMVYFPGSHL*FLKPKS
Trigger: AGACTTTGGCTTCAGAAAGCACAGATGTGACCCAGG...AAAATATACCATAGCTGCTTTCTTGTCAGTGGCCTTTGAGAGAAAGAGAAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp AATTTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAACACATCTGTGCTTTCTaGAGCCAAAGTCTAGTTTTT +
Preference number: 2 (lower is better)
Translates to: NFRNLLMRGRIENVGSTEHICAF*SQSLVF
Trigger: AAAAACTAGACTTTGGCTTCAGAAAGCACAGATGTG...TTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp AATTTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAATATATTTTCCTTGACTaGGGGCTGGAGACTCAAAAA +
Preference number: 2 (lower is better)
Translates to: NFRNLLMRGRIENVGSTEYIFLD*GLETQK
Trigger: TTTTTGAGTCTCCAGCCCTCAGTCAAGGAAAATATA...TTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp AATTTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAATGTGTTCTAGCTGACTaGAAACAGAAAAATGCCAAG +
Preference number: 2 (lower is better)
Translates to: NFRNLLMRGRIENVGSTECVLAD*KQKNAK
Trigger: CTTGGCATTTTTCTGTTTTCAGTCAGCTAGAACACA...TTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR TCA 90 bp TTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAATAACAAGTAGATTCACATaGGAAGAACTCCAAAAGGTA +
Preference number: 2 (lower is better)
Translates to: FRNLLMRGRIENVGSTEITSRFT*EELQKV
Trigger: TACCTTTTGGAGTTCTTCTCATGTGAATCTACTTGT...TATTTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CCA 90 bp TTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAATAACAAGGCACAAGATTTaGAATTTACCCTTTACAGAC +
Preference number: 2 (lower is better)
Translates to: FRNLLMRGRIENVGSTEITRHKI*NLPFTD
Trigger: GTCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGT...TATTTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp CCCATAGTCCCAGCTACTTGGTGGCCGGGGAAGGGGTaGCTGAGGCAAGAGGATCACCTGAGCCTTGGGAGG +
Preference number: 3 (lower is better)
Translates to: PIVPATWWPGKG*LRQEDHLSLGR
Trigger: CCTCCCAAGGCTCAGGTGATCCTCTTGCCTCAGCCACCCCTTCCCCGGCCACCAAGTAGCTGGGACTATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR GCA 72 bp GAATGCAAAGCCCCTCATGAGCGCAATGCTGCCACTTaGCCAGAAGGTGGGGCATGTGCACAAGGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: ECKAPHERNAAT*PEGGACAQGSS
Trigger: GCTGCTGCCTTGTGCACATGCCCCACCTTCTGGGCAAGTGGCAGCATTGCGCTCATGAGGGGCTTTGCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp CACCTGAGGGGGAGACGGCGTTGGGATAGGTATGACTaGCTTAAGAGACCACAGGCAAGGGAACAACAGGGG +
Preference number: 3 (lower is better)
Translates to: HLRGRRRWDRYD*LKRPQAREQQG
Trigger: CCCCTGTTGTTCCCTTGCCTGTGGTCTCTTAAGCCAGTCATACCTATCCCAACGCCGTCTCCCCCTCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 72 bp GTTTATTGCCCTTGGCTAAGAATGCAAAGCCCCTCATaGGCGCAATGCTGCCACTTGCCCAGAAGGTGGGGC +
Preference number: 3 (lower is better)
Translates to: VYCPWLRMQSPS*AQCCHLPRRWG
Trigger: GCCCCACCTTCTGGGCAAGTGGCAGCATTGCGCTCATGAGGGGCTTTGCATTCTTAGCCAAGGGCAATAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp CTGCCCAGCCAGAGCCCTCTAGAAGGTTGCTGGGCTTaGGGCTATTTTACACTGGATAAGCCCTTCCTGAGT +
Preference number: 3 (lower is better)
Translates to: LPSQSPLEGCWA*GYFTLDKPFLS
Trigger: ACTCAGGAAGGGCTTATCCAGTGTAAAATAGCCCCAAGCCCAGCAACCTTCTAGAGGGCTCTGGCTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp GAATGGAGTGGAGCTGAAGTGGCCCAACCCAGCGCATaGCCTGTGAAGCAGCAAAGTCTGGTCTTCATCTTC +
Preference number: 3 (lower is better)
Translates to: EWSGAEVAQPSA*PVKQQSLVFIF
Trigger: GAAGATGAAGACCAGACTTTGCTGCTTCACAGGCCATGCGCTGGGTTGGGCCACTTCAGCTCCACTCCATTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 72 bp CAAGGATCCCAGTCCAGTCCTTCCCCAACAGTTGCATaGGTGTCAAAAGGCACTGTTTGTCCAGGGTTGGGG +
Preference number: 3 (lower is better)
Translates to: QGSQSSPSPTVA*VSKGTVCPGLG
Trigger: CCCCAACCCTGGACAAACAGTGCCTTTTGACACTCATGCAACTGTTGGGGAAGGACTGGACTGGGATCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 72 bp GGAGGGAAAGCTGGGCCGAGCTCTACTTGTGACAACTaGTACTACAGTTTCTTTTCCCCTGCTGTCACCCCC +
Preference number: 3 (lower is better)
Translates to: GGKAGPSSTCDN*YYSFFSPAVTP
Trigger: GGGGGTGACAGCAGGGGAAAAGAAACTGTAGTATCAGTTGTCACAAGTAGAGCTCGGCCCAGCTTTCCCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp AGCAGCAGATCTTCCACCGTGTGGAAGGAGCCTATGTaGATTCAACTAGGTCGCAGCTGCAAAGGCTCTGAG +
Preference number: 3 (lower is better)
Translates to: SSRSSTVWKEPM*IQLGRSCKGSE
Trigger: CTCAGAGCCTTTGCAGCTGCGACCTAGTTGAATCCACATAGGCTCCTTCCACACGGTGGAAGATCTGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp AGCTATCTGCCCAGCCAGAGCCCTCTAGAAGGTTGCTaGGCTTGGGGCTATTTTACACTGGATAAGCCCTTC +
Preference number: 3 (lower is better)
Translates to: SYLPSQSPLEGC*AWGYFTLDKPF
Trigger: GAAGGGCTTATCCAGTGTAAAATAGCCCCAAGCCCAGCAACCTTCTAGAGGGCTCTGGCTGGGCAGATAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp CGGGTTGACATTGGAGTGACAGGCCTCAACTCCCAATaGGTTGACATTGGAGTGACAGGAGTAGGCACTGGA +
Preference number: 3 (lower is better)
Translates to: RVDIGVTGLNSQ*VDIGVTGVGTG
Trigger: TCCAGTGCCTACTCCTGTCACTCCAATGTCAACCCATTGGGAGTTGAGGCCTGTCACTCCAATGTCAACCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp TATTACCCTAAGCCGTCACTGCACAGCCTACTCCCCTaGCCTATCACAGCAGGACCTATCTGGAGAGTTCAC +
Preference number: 3 (lower is better)
Translates to: YYPKPSLHSLLP*PITAGPIWRVH
Trigger: GTGAACTCTCCAGATAGGTCCTGCTGTGATAGGCCAGGGGAGTAGGCTGTGCAGTGACGGCTTAGGGTAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp ATCTTCCCTTCTACACACCTGAGGGGGAGACGGCGTTaGGATAGGTATGACTGGCTTAAGAGACCACAGGCA +
Preference number: 3 (lower is better)
Translates to: IFPSTHLRGRRR*DRYDWLKRPQA
Trigger: TGCCTGTGGTCTCTTAAGCCAGTCATACCTATCCCAACGCCGTCTCCCCCTCAGGTGTGTAGAAGGGAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CAA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATTACCCTAGCTCCCCGTaGTCCTTCCACAGAAGGAAC +
Preference number: 3 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHYPSSP*SFHRRN
Trigger: GTTCCTTCTGTGGAAGGACAACGGGGAGCTAGGGTA...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CAA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATGAGCCCTCTAGAAGGTaGCTGGGCTTGGGGCTATTT +
Preference number: 3 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHEPSRR*LGLGLF
Trigger: AAATAGCCCCAAGCCCAGCAACCTTCTAGAGGGCTC...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 72 bp TATGTGGATTCAACTAGGTCGCAGCTGCAAAGGCTCTaGGCACAGCAATGTGTAACAGGGAAGAGAGGGGCC +
Preference number: 3 (lower is better)
Translates to: YVDSTRSQLQRL*AQQCVTGKRGA
Trigger: GGCCCCTCTCTTCCCTGTTACACATTGCTGTGCTCAGAGCCTTTGCAGCTGCGACCTAGTTGAATCCACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 72 bp CAGCACACACCAGAACAATGCCCACCTGAATCCCTCTaGGTACATGTGTGCATTCAGCATGGAGCCACAGCT +
Preference number: 3 (lower is better)
Translates to: QHTPEQCPPESL*VHVCIQHGATA
Trigger: AGCTGTGGCTCCATGCTGAATGCACACATGTACTCAGAGGGATTCAGGTGGGCATTGTTCTGGTGTGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 72 bp CTCCCCGTTGTCCTTCCACAGAAGGAACATTATTTCTaGTGTCCTGGTTCCCTGGGCAAAGGGTCCAAGCAC +
Preference number: 3 (lower is better)
Translates to: LPVVLPQKEHYF*CPGSLGKGSKH
Trigger: GTGCTTGGACCCTTTGCCCAGGGAACCAGGACATCAGAAATAATGTTCCTTCTGTGGAAGGACAACGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR GCA 72 bp TCCTGCCTTGTGAGATGTGGCCCCAGCTTCCTAAGCTaGCACCTCTGTGTTCCTGTCATAGCAAATATGGGA +
Preference number: 3 (lower is better)
Translates to: SCLVRCGPSFLS*HLCVPVIANMG
Trigger: TCCCATATTTGCTATGACAGGAACACAGAGGTGGCAGCTTAGGAAGCTGGGGCCACATCTCACAAGGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp GAACTTGCCAGGGAAGACCTAGTCTTCAACCAAGTTTaGCTCAAGGGTGTGTTCCCAGGGCTGTGGAGTTGT +
Preference number: 3 (lower is better)
Translates to: ELAREDLVFNQV*LKGVFPGLWSC
Trigger: ACAACTCCACAGCCCTGGGAACACACCCTTGAGCCAAACTTGGTTGAAGACTAGGTCTTCCCTGGCAAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CAA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGGGATCGGATGGGGCTaGCAAAGCCAACACCTCTGC +
Preference number: 3 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYGIGWG*QSQHLC
Trigger: GCAGAGGTGTTGGCTTTGCAAGCCCCATCCGATCCC...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552916.5
3UTR TCA 72 bp CACCATTGCACAGCACACACCAGAACAATGCCCACCTaGATCCCTCTGAGTACATGTGTGCATTCAGCATGG +
Preference number: 3 (lower is better)
Translates to: HHCTAHTRTMPT*IPLSTCVHSAW
Trigger: CCATGCTGAATGCACACATGTACTCAGAGGGATTCAGGTGGGCATTGTTCTGGTGTGTGCTGTGCAATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 72 bp CTAGGACATTCCAGCAAGGCCTCTCACAGCATCATATaGCGCAAAGTAACAGCCCACGGGTTGACATTGGAG +
Preference number: 3 (lower is better)
Translates to: LGHSSKASHSII*RKVTAHGLTLE
Trigger: CTCCAATGTCAACCCGTGGGCTGTTACTTTGCGTCATATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp AACCAAGTTTGGCTCAAGGGTGTGTTCCCAGGGCTGTaGAGTTGTCTCTTTAGTAAGCCTGGGTCACATCTG +
Preference number: 3 (lower is better)
Translates to: NQVWLKGVFPGL*SCLFSKPGSHL
Trigger: CAGATGTGACCCAGGCTTACTAAAGAGACAACTCCACAGCCCTGGGAACACACCCTTGAGCCAAACTTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CAA 90 bp AATTTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAACATAGTCCCAGCTACTaGGTGGCCGGGGAAGGGGTG +
Preference number: 3 (lower is better)
Translates to: NFRNLLMRGRIENVGSTEHSPSY*VAGEGV
Trigger: CACCCCTTCCCCGGCCACCAAGTAGCTGGGACTATG...TTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR GCA 72 bp GATAATTCTTGGCTGGGGGTAGTGGGGACTATCCTATaGAGTGTAGGATGTTTAGCAGCCACTAGATGCCAG +
Preference number: 3 (lower is better)
Translates to: DNSWLGVVGTIL*SVGCLAATRCQ
Trigger: CTGGCATCTAGTGGCTGCTAAACATCCTACACTGCATAGGATAGTCCCCACTACCCCCAGCCAAGAATTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp AGAAGCTCACAGTCTGGTTTTAGCTGCCAACTCCTATaGAAGTCCATAGCTGACTCCTATGGAAGGCCTACC +
Preference number: 3 (lower is better)
Translates to: RSSQSGFSCQLL*KSIADSYGRPT
Trigger: GGTAGGCCTTCCATAGGAGTCAGCTATGGACTTCCATAGGAGTTGGCAGCTAAAACCAGACTGTGAGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CAA 90 bp GGAAGGATTGGTATAACAAGGCACAAGATTTGGAATTTACCCTTTACAGACTGGAGCCTAGGGGCAAGTTaGGGCCAGATCACCCACCCA +
Preference number: 3 (lower is better)
Translates to: GRIGITRHKIWNLPFTDWSLGAS*GQITHP
Trigger: TGGGTGGGTGATCTGGCCCAAACTTGCCCCTAGGCT...CCAGTCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGTTATACCAATCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR GCA 72 bp CAGAACGGAGACAGAAGCTCACAGTCTGGTTTTAGCTaGCAACTCCTATGGAAGTCCATAGCTGACTCCTAT +
Preference number: 3 (lower is better)
Translates to: QNGDRSSQSGFS*QLLWKSIADSY
Trigger: ATAGGAGTCAGCTATGGACTTCCATAGGAGTTGGCAGCTAAAACCAGACTGTGAGCTTCTGTCTCCGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp GAGCCTGAGATGAGGAGTAATAACACCGATAGGAGATaGCTAGGCAGGCTCAGAGCCTATAAAGGATTATGC +
Preference number: 3 (lower is better)
Translates to: EPEMRSNNTDRR*LGRLRAYKGLC
Trigger: GCATAATCCTTTATAGGCTCTGAGCCTGCCTAGCCATCTCCTATCGGTGTTATTACTCCTCATCTCAGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp AAAGGGTATATGTTGGAGTGGGGACTTCACTCGCGCTaGATATGTATTACCCTCCAGCCTGGAAACTTTGTC +
Preference number: 3 (lower is better)
Translates to: KGYMLEWGLHSR*ICITLQPGNFV
Trigger: GACAAAGTTTCCAGGCTGGAGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp AGGTGTTTACCCACCCAAAAAGGGTATATGTTGGAGTaGGGACTTCACTCGCGCTGGATATGTATTACCCTC +
Preference number: 3 (lower is better)
Translates to: RCLPTQKGYMLE*GLHSRWICITL
Trigger: GAGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTTTGGGTGGGTAAACACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CAA 90 bp TACTCCCAAAAAGCTATACCTCAGATGCTGTTGGCCTTGGCAGTGAGAAGAGTTAGTCTTCAACCAAGTTaGGCTCAAGGGTGTGTTCCC +
Preference number: 3 (lower is better)
Translates to: YSQKAIPQMLLALAVRRVSLQPS*AQGCVP
Trigger: GGGAACACACCCTTGAGCCAAACTTGGTTGAAGACT...AACTCTTCTCACTGCCAAGGCCAACAGCATCTGAGGTATAGCTTTTTGGGAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CAA 90 bp GGAAGGATTGGTATAACAAGGCACAAGATTTGGAATTTACCCTTTACAGACTGGTTAAGAGCCCAACCCTaGGCTGTGAGCTGGAAGGCT +
Preference number: 3 (lower is better)
Translates to: GRIGITRHKIWNLPFTDWLRAQP*AVSWKA
Trigger: AGCCTTCCAGCTCACAGCCAAGGGTTGGGCTCTTAA...CCAGTCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGTTATACCAATCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CAA 90 bp GGAAGGATTGGTATAACAAGGCACAAGATTTGGAATTTACCCTTTACAGACTGGAGGTGGGAGGCTCACTaGACAGGAGTTCAAGACCAG +
Preference number: 3 (lower is better)
Translates to: GRIGITRHKIWNLPFTDWRWEAH*TGVQDQ
Trigger: CTGGTCTTGAACTCCTGTCAAGTGAGCCTCCCACCT...CCAGTCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGTTATACCAATCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 72 bp GGGCTTGGGGCTATTTTACACTGGATAAGCCCTTCCTaGGTTTGGAAGCATCAATTAGAAGACTGCGGCAAT +
Preference number: 3 (lower is better)
Translates to: GLGAILHWISPS*VWKHQLEDCGN
Trigger: ATTGCCGCAGTCTTCTAATTGATGCTTCCAAACTCAGGAAGGGCTTATCCAGTGTAAAATAGCCCCAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 72 bp GAGGGGAGTGGCAATATCAACAATGGTTTCTATGCGTaGAAGGCCCTTCCTAAACCTCCTACCATAGCAAAG +
Preference number: 3 (lower is better)
Translates to: EGSGNINNGFYA*KALPKPPTIAK
Trigger: CTTTGCTATGGTAGGAGGTTTAGGAAGGGCCTTTCACGCATAGAAACCATTGTTGATATTGCCACTCCCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp CGCTTCCAGCCTTATAAAAATGACAGACTCCCTCTTTaGTGTTTGGTTACCTTCACAGCTATACGCCAGCCA +
Preference number: 3 (lower is better)
Translates to: RFQPYKNDRLPL*CLVTFTAIRQP
Trigger: TGGCTGGCGTATAGCTGTGAAGGTAACCAAACACCAAAGAGGGAGTCTGTCATTTTTATAAGGCTGGAAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CAA 90 bp AATTTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAATGTACTTCCAGCTACTaGGGAGGCTTAGGTGGGAAG +
Preference number: 3 (lower is better)
Translates to: NFRNLLMRGRIENVGSTECTSSY*GGLGGK
Trigger: CTTCCCACCTAAGCCTCCCAAGTAGCTGGAAGTACA...TTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 72 bp ACTGTCTATATCAGTGTTTCCCAGTCTTGGCAATATTaGCCCCTGGAGTCAGATAATTCTTGGCTGGGGGTA +
Preference number: 3 (lower is better)
Translates to: TVYISVSQSWQY*PLESDNSWLGV
Trigger: TACCCCCAGCCAAGAATTATCTGACTCCAGGGGTCAATATTGCCAAGACTGGGAAACACTGATATAGACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 72 bp ACAAGGACAAGGAAGTTTGGGGATCTGCTTGGAGAATaGAGGTTTATTCAAAACAAGTGGACAGGTCAGGGG +
Preference number: 3 (lower is better)
Translates to: TRTRKFGDLLGE*RFIQNKWTGQG
Trigger: CCCCTGACCTGTCCACTTGTTTTGAATAAACCTTCATTCTCCAAGCAGATCCCCAAACTTCCTTGTCCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp CTCTTGCTATATGCAGAGTTATCAAAAGTCAAAGTCTaGGGAGAATTCAAGGATCCCAGTCCAGTCCTTCCC +
Preference number: 3 (lower is better)
Translates to: LLLYAELSKVKV*GEFKDPSPVLP
Trigger: GGGAAGGACTGGACTGGGATCCTTGAATTCTCCCCAGACTTTGACTTTTGATAACTCTGCATATAGCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp CAAAGAGGTGTTTACCCACCCAAAAAGGGTATATGTTaGAGTGGGGACTTCACTCGCGCTGGATATGTATTA +
Preference number: 3 (lower is better)
Translates to: QRGVYPPKKGIC*SGDFTRAGYVL
Trigger: TAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTTTGGGTGGGTAAACACCTCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CAA 90 bp AATTTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAGTCCTTCCCCAACAGTaGCATGAGTGTCAAAAGGCA +
Preference number: 3 (lower is better)
Translates to: NFRNLLMRGRIENVGSTEVLPQQ*HECQKA
Trigger: TGCCTTTTGACACTCATGCAACTGTTGGGGAAGGAC...TTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CAA 90 bp TGTTTTCTCTTTCTCTCAAAGGCCACTGACAAGAAAGCAGCTATGGTATATTTTTTTATATCCTACCCATaGCCCCGCACTCCCTCACCC +
Preference number: 3 (lower is better)
Translates to: CFLFLSKATDKKAAMVYFFISYP*PRTPSP
Trigger: GGGTGAGGGAGTGCGGGGCAATGGGTAGGATATAAA...AAAATATACCATAGCTGCTTTCTTGTCAGTGGCCTTTGAGAGAAAGAGAAAACA
44% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CAA 90 bp AAAAGGGTATATGTTGGAGTGGGGACTTCACTCGCGCTGGATATGTATTACCCTAAGCCCTTCCTGAGTTaGGAAGCATCAATTAGAAGA +
Preference number: 3 (lower is better)
Translates to: KRVYVGVGTSLALDMYYPKPFLS*EASIRR
Trigger: TCTTCTAATTGATGCTTCCAAACTCAGGAAGGGCTT...AGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CAA 90 bp GGAAGGATTGGTATAACAAGGCACAAGATTTGGAATTTACCCTTTACAGACTGGAGAAGGTTGCTGGGCTaGGGGCTATTTTACACTGGA +
Preference number: 3 (lower is better)
Translates to: GRIGITRHKIWNLPFTDWRRLLG*GLFYTG
Trigger: TCCAGTGTAAAATAGCCCCAAGCCCAGCAACCTTCT...CCAGTCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGTTATACCAATCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR GCA 72 bp CACTGCAAAATAACTTCAGGCCCCCATCACTTCCCATaGCCAAACCAGAAACACTCATTAATACAATCTAAC +
Preference number: 3 (lower is better)
Translates to: HCKITSGPHHFP*PNQKHSLIQSN
Trigger: GTTAGATTGTATTAATGAGTGTTTCTGGTTTGGGCATGGGAAGTGATGGGGGCCTGAAGTTATTTTGCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp ACGTGTAACAAGGACAAGGAAGTTTGGGGATCTGCTTaGAGAATGAAGGTTTATTCAAAACAAGTGGACAGG +
Preference number: 3 (lower is better)
Translates to: TCNKDKEVWGSA*RMKVYSKQVDR
Trigger: CCTGTCCACTTGTTTTGAATAAACCTTCATTCTCCAAGCAGATCCCCAAACTTCCTTGTCCTTGTTACACGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CAA 90 bp TGTTTTCTCTTTCTCTCAAAGGCCACTGACAAGAAAGCAGCTATGGTATATTTTATACCTCAGATGCTGTaGGCCTTGGCAGTGAGAAGA +
Preference number: 3 (lower is better)
Translates to: CFLFLSKATDKKAAMVYFIPQML*ALAVRR
Trigger: TCTTCTCACTGCCAAGGCCAACAGCATCTGAGGTAT...AAAATATACCATAGCTGCTTTCTTGTCAGTGGCCTTTGAGAGAAAGAGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR-3UTR CAA 90 bp AAAAGGGTATATGTTGGAGTGGGGACTTCACTCGCGCTGGATATGTATTACCCTAACAAGGCACAAGATTaGGAATTTACCCTTTACAGA +
Preference number: 3 (lower is better)
Translates to: KRVYVGVGTSLALDMYYPNKAQD*EFTLYR
Trigger: TCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGTT...AGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR GCA 72 bp GGAGCCACAGCTCTTTCAAGAATCACTCTTGCTATATaGAGAGTTATCAAAAGTCAAAGTCTGGGGAGAATT +
Preference number: 3 (lower is better)
Translates to: GATALSRITLAI*RVIKSQSLGRI
Trigger: AATTCTCCCCAGACTTTGACTTTTGATAACTCTGCATATAGCAAGAGTGATTCTTGAAAGAGCTGTGGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 72 bp AAAAAGCTATACCTCAGATGCTGTTGGCCTTGGCAGTaGGAAGAGTTGATAAAAGTCAGTAAGTCCATTCTT +
Preference number: 3 (lower is better)
Translates to: KKLYLRCCWPWQ*EELIKVSKSIL
Trigger: AAGAATGGACTTACTGACTTTTATCAACTCTTCTCACTGCCAAGGCCAACAGCATCTGAGGTATAGCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CCA 72 bp GGAGAAGACAAGAGCAGGATTTTATTTCCTAGAAGATaGGTGAAGTCTTTCTTCAATCTGTCTCCATGTGTA +
Preference number: 3 (lower is better)
Translates to: GEDKSRILFPRR*VKSFFNLSPCV
Trigger: TACACATGGAGACAGATTGAAGAAAGACTTCACCCATCTTCTAGGAAATAAAATCCTGCTCTTGTCTTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR TCA 72 bp AATAATTCCAATACATCGAAAACTTTTTCATATAGATaGGAAGCTGCGACCACCATGTCTCTTCAAGGTAGG +
Preference number: 3 (lower is better)
Translates to: NNSNTSKTFSYR*EAATTMSLQGR
Trigger: CCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATGTATTGGAATTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262031.10
ENST00000542360.1
ENST00000552916.5
CDS-3UTR TCA 90 bp GGTTCCCTGGGCAAAGGGTCCAAGCACACCGGGGCAGGGCAGGTTGCTCTGGACGGTGGGTGGATCATTTaGGCCCAGGAGTTCGAGACG +
Preference number: 4 (lower is better)
Translates to: GSLGKGSKHTGAGQVALDGGWII*AQEFET
Trigger: CGTCTCGAACTCCTGGGCTCAAATGATCCACCCACC...GTCCAGAGCAACCTGCCCTGCCCCGGTGTGCTTGGACCCTTTGCCCAGGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp GGTTCCCTGGGCAAAGGGTCCAAGCACACCGGGGCAGGGCAGGTTGCTCTGGACCGCAATGCTGCCACTTaGCCAGAAGGTGGGGCATGT +
Preference number: 4 (lower is better)
Translates to: GSLGKGSKHTGAGQVALDRNAAT*PEGGAC
Trigger: ACATGCCCCACCTTCTGGGCAAGTGGCAGCATTGCG...GTCCAGAGCAACCTGCCCTGCCCCGGTGTGCTTGGACCCTTTGCCCAGGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp GGTTCCCTGGGCAAAGGGTCCAAGCACACCGGGGCAGGGCAGGTTGCTCTGGACCACAGCCTACTCCCCTaGCCTATCACAGCAGGACCT +
Preference number: 4 (lower is better)
Translates to: GSLGKGSKHTGAGQVALDHSLLP*PITAGP
Trigger: AGGTCCTGCTGTGATAGGCCAGGGGAGTAGGCTGTG...GTCCAGAGCAACCTGCCCTGCCCCGGTGTGCTTGGACCCTTTGCCCAGGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp GGTTCCCTGGGCAAAGGGTCCAAGCACACCGGGGCAGGGCAGGTTGCTCTGGACCTCCTGGTCTGTGAGTaGAGCAGCAGATCTTCCACC +
Preference number: 4 (lower is better)
Translates to: GSLGKGSKHTGAGQVALDLLVCE*SSRSST
Trigger: GGTGGAAGATCTGCTGCTTCACTCACAGACCAGGAG...GTCCAGAGCAACCTGCCCTGCCCCGGTGTGCTTGGACCCTTTGCCCAGGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp GGTTCCCTGGGCAAAGGGTCCAAGCACACCGGGGCAGGGCAGGTTGCTCTGGACAACACCGATAGGAGATaGCTAGGCAGGCTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GSLGKGSKHTGAGQVALDNTDRR*LGRLRA
Trigger: GGCTCTGAGCCTGCCTAGCCATCTCCTATCGGTGTT...GTCCAGAGCAACCTGCCCTGCCCCGGTGTGCTTGGACCCTTTGCCCAGGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp GGTTCCCTGGGCAAAGGGTCCAAGCACACCGGGGCAGGGCAGGTTGCTCTGGACTGGAAGGAGCCTATGTaGATTCAACTAGGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: GSLGKGSKHTGAGQVALDWKEPM*IQLGRS
Trigger: GCTGCGACCTAGTTGAATCCACATAGGCTCCTTCCA...GTCCAGAGCAACCTGCCCTGCCCCGGTGTGCTTGGACCCTTTGCCCAGGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp GGTTCCCTGGGCAAAGGGTCCAAGCACACCGGGGCAGGGCAGGTTGCTCTGGACCTGATTGAGAACTCCTaGTCTGTGAGTGAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GSLGKGSKHTGAGQVALDLIENS*SVSEAA
Trigger: TGCTGCTTCACTCACAGACCAGGAGTTCTCAATCAG...GTCCAGAGCAACCTGCCCTGCCCCGGTGTGCTTGGACCCTTTGCCCAGGGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATGTCCCAGCTACTTGGTaGCCGGGGAAGGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHVPATW*PGKGWL
Trigger: CAGCCACCCCTTCCCCGGCCACCAAGTAGCTGGGAC...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp GGTTCCCTGGGCAAAGGGTCCAAGCACACCGGGGCAGGGCAGGTTGCTCTGGACGAAACTTTGTCTTGGTaGAACCCCCTAAACTGTATG +
Preference number: 4 (lower is better)
Translates to: GSLGKGSKHTGAGQVALDETLSW*NPLNCM
Trigger: CATACAGTTTAGGGGGTTGCACCAAGACAAAGTTTC...GTCCAGAGCAACCTGCCCTGCCCCGGTGTGCTTGGACCCTTTGCCCAGGGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp GGTTCCCTGGGCAAAGGGTCCAAGCACACCGGGGCAGGGCAGGTTGCTCTGGACACAGCAGGACCTATCTaGAGAGTTCACACTATTCTA +
Preference number: 4 (lower is better)
Translates to: GSLGKGSKHTGAGQVALDTAGPI*RVHTIL
Trigger: TAGAATAGTGTGAACTCTCCAGATAGGTCCTGCTGT...GTCCAGAGCAACCTGCCCTGCCCCGGTGTGCTTGGACCCTTTGCCCAGGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp GGTTCCCTGGGCAAAGGGTCCAAGCACACCGGGGCAGGGCAGGTTGCTCTGGACTCTTCATCTTCAATATaGGTAATGTCCTCTTACCAC +
Preference number: 4 (lower is better)
Translates to: GSLGKGSKHTGAGQVALDSSSSI*VMSSYH
Trigger: GTGGTAAGAGGACATTACTCATATTGAAGATGAAGA...GTCCAGAGCAACCTGCCCTGCCCCGGTGTGCTTGGACCCTTTGCCCAGGGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp GTGAGGCAGAGGAGAGGGGAGTGGCAATATCAACAATGGTTTCTATGCGTGAAATGGCCGGGGAAGGGGTaGCTGAGGCAAGAGGATCAC +
Preference number: 4 (lower is better)
Translates to: VRQRRGEWQYQQWFLCVKWPGKG*LRQEDH
Trigger: GTGATCCTCTTGCCTCAGCCACCCCTTCCCCGGCCA...TTTCACGCATAGAAACCATTGTTGATATTGCCACTCCCCTCTCCTCTGCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATATGCAAAGCCCCTCATaGGCGCAATGCTGCCACTTG +
Preference number: 4 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHMQSPS*AQCCHL
Trigger: CAAGTGGCAGCATTGCGCTCATGAGGGGCTTTGCAT...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp TCTGGGGAGAATTCAAGGATCCCAGTCCAGTCCTTCCCCAACAGTTGCATGAGTAGATGGAGGTTTCAGTaGGCCAAGATCACGCCACTG +
Preference number: 4 (lower is better)
Translates to: SGENSRIPVQSFPNSCMSRWRFQ*AKITPL
Trigger: CAGTGGCGTGATCTTGGCTCACTGAAACCTCCATCT...ACTCATGCAACTGTTGGGGAAGGACTGGACTGGGATCCTTGAATTCTCCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAACGAATGGAGTGGAGCTaGAGTGGCCCAACCCAGCGC +
Preference number: 4 (lower is better)
Translates to: LFHIDEKLRPPCLFKVGERMEWS*SGPTQR
Trigger: GCGCTGGGTTGGGCCACTTCAGCTCCACTCCATTCG...TTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATCTATACGCCAGCCACTaGGCAGCTTTCTTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHLYASH*AAFLSS
Trigger: AGAGGACAAGAAAGCTGCTCAGTGGCTGGCGTATAG...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTGGGATCGGATGGGGCTaGTACTCCAGGGGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVGIGWG*YSRGCL
Trigger: AAGACACCCCCTGGAGTACCAGCCCCATCCGATCCC...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262031.10
ENST00000542360.1
ENST00000550726.5
ENST00000552247.6
CDS-3UTR CCA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACAAGCAAGGGATCGGATaGGGCTGGTACTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYKQGIG*GWYSRG
Trigger: CCCCCTGGAGTACCAGCCCCATCCGATCCCTTGCTT...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262031.10
ENST00000542360.1
ENST00000550726.5
ENST00000552247.6
CDS-3UTR CCA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATGTCTGGCTGAGTTGCTaGAGCAAAGGGGGATTCAGT +
Preference number: 4 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHVWLSC*SKGGFS
Trigger: ACTGAATCCCCCTTTGCTCCAGCAACTCAGCCAGAC...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp CTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAGGGATCGGATGGGGCTaGTACTCCAGGGGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: LFHIDEKLRPPCLFKVGEGIGWG*YSRGCL
Trigger: AAGACACCCCCTGGAGTACCAGCCCCATCCGATCCC...TTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262031.10
ENST00000542360.1
ENST00000550726.5
ENST00000552247.6
CDS-3UTR CCA 90 bp TTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGGGGATCGGATGGGGCTaGTACTCCAGGGGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: FHIDEKLRPPCLFKVGEKGIGWG*YSRGCL
Trigger: AAGACACCCCCTGGAGTACCAGCCCCATCCGATCCC...CTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000262031.10
ENST00000542360.1
ENST00000550726.5
ENST00000552247.6
CDS-3UTR CCA 90 bp TTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGAAGCAAGGGATCGGATaGGGCTGGTACTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: FHIDEKLRPPCLFKVGEKKQGIG*GWYSRG
Trigger: CCCCCTGGAGTACCAGCCCCATCCGATCCCTTGCTT...CTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262031.10
ENST00000542360.1
ENST00000550726.5
ENST00000552247.6
CDS-3UTR CCA 90 bp GCAGAGTTATCAAAAGTCAAAGTCTGGGGAGAATTCAAGGATCCCAGTCCAGTCCTTGGGAGGCTTAGGTaGGAAGAACCCTTGGGCCCA +
Preference number: 4 (lower is better)
Translates to: AELSKVKVWGEFKDPSPVLGRLR*EEPLGP
Trigger: TGGGCCCAAGGGTTCTTCCCACCTAAGCCTCCCAAG...GACTGGACTGGGATCCTTGAATTCTCCCCAGACTTTGACTTTTGATAACTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGCCCAACCCAGCGCATaGCCTGTGAAGCAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYAQPSA*PVKQQS
Trigger: ACTTTGCTGCTTCACAGGCCATGCGCTGGGTTGGGC...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp GTGAGGCAGAGGAGAGGGGAGTGGCAATATCAACAATGGTTTCTATGCGTGAAAAGGGGGAGACGGCGTTaGGATAGGTATGACTGGCTT +
Preference number: 4 (lower is better)
Translates to: VRQRRGEWQYQQWFLCVKRGRRR*DRYDWL
Trigger: AAGCCAGTCATACCTATCCCAACGCCGTCTCCCCCT...TTTCACGCATAGAAACCATTGTTGATATTGCCACTCCCCTCTCCTCTGCCTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CAA 72 bp CCTTTGTCTGACTGTCTAGTGGAGAGGCACCTGGCCTaGAAGTGCAAGGGAGTCAAATTCTCCTTTCAGTGC +
Preference number: 4 (lower is better)
Translates to: PLSDCLVERHLA*KCKGVKFSFQC
Trigger: GCACTGAAAGGAGAATTTGACTCCCTTGCACTTCAAGGCCAGGTGCCTCTCCACTAGACAGTCAGACAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp TACTCCCAAAAAGCTATACCTCAGATGCTGTTGGCCTTGGCAGTGAGAAGAGTTCATAGGTCAAGGCCATaGCGCCCATGTCTGCATTCC +
Preference number: 4 (lower is better)
Translates to: YSQKAIPQMLLALAVRRVHRSRP*RPCLHS
Trigger: GGAATGCAGACATGGGCGTCATGGCCTTGACCTATG...AACTCTTCTCACTGCCAAGGCCAACAGCATCTGAGGTATAGCTTTTTGGGAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTCATAGGTCAAGGCCATaGCGCCCATGTCTGCATTCC +
Preference number: 4 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVHRSRP*RPCLHS
Trigger: GGAATGCAGACATGGGCGTCATGGCCTTGACCTATG...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262031.10
ENST00000542360.1
ENST00000550726.5
ENST00000552247.6
ENST00000552916.5
CDS-3UTR TCA 90 bp GTGAGGCAGAGGAGAGGGGAGTGGCAATATCAACAATGGTTTCTATGCGTGAAAAGAGGCACCTGGCCTTaGAGTGCAAGGGAGTCAAAT +
Preference number: 4 (lower is better)
Translates to: VRQRRGEWQYQQWFLCVKRGTWP*SARESN
Trigger: ATTTGACTCCCTTGCACTTCAAGGCCAGGTGCCTCT...TTTCACGCATAGAAACCATTGTTGATATTGCCACTCCCCTCTCCTCTGCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp GGAAGGATTGGTATAACAAGGCACAAGATTTGGAATTTACCCTTTACAGACTGGGGCAAGAGGATCACCTaGGCCTTGGGAGGTCGAGGC +
Preference number: 4 (lower is better)
Translates to: GRIGITRHKIWNLPFTDWGKRIT*ALGGRG
Trigger: GCCTCGACCTCCCAAGGCTCAGGTGATCCTCTTGCC...CCAGTCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGTTATACCAATCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGGCAGGTGGATCATTTaGGCCCAGGAGTTCAACACC +
Preference number: 4 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYGRWII*AQEFNT
Trigger: GGTGTTGAACTCCTGGGCTCAAATGATCCACCTGCC...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp TTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGGTCTCTGAAGCCTGCTaGTTCAGGGCTAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: FHIDEKLRPPCLFKVGEKVSEAC*FRASRA
Trigger: GGCTCTGCTAGCCCTGAATCAGCAGGCTTCAGAGAC...CTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATAATGCGTGGGAGGATTaGAAATGTAGGCAGCACAGA +
Preference number: 4 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHNAWED*KCRQHR
Trigger: TCTGTGCTGCCTACATTTTCAATCCTCCCACGCATT...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACCTCAGGAGGCAGAGGTaGGAGAATCGCTTGAACCTG +
Preference number: 4 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYLRRQR*ENRLNL
Trigger: CAGGTTCAAGCGATTCTCTCACCTCTGCCTCCTGAG...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542360.1
CDS-3UTR GCA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTGGTTCTGTTGGCCGCTaGTCTCCTCGACTGAAACAC +
Preference number: 4 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVGSVGR*SPRLKH
Trigger: GTGTTTCAGTCGAGGAGAGCAGCGGCCAACAGAACC...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262031.10
ENST00000542360.1
ENST00000550726.5
ENST00000552247.6
ENST00000552916.5
CDS-3UTR GCA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGGTTCTGTTGGCCGCTaGTCTCCTCGACTGAAACAC +
Preference number: 4 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYGSVGR*SPRLKH
Trigger: GTGTTTCAGTCGAGGAGAGCAGCGGCCAACAGAACC...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262031.10
ENST00000542360.1
ENST00000550726.5
ENST00000552247.6
ENST00000552916.5
CDS-3UTR GCA 90 bp CCATCAACCCAACCAATTAGACTATTTCATGGGAGAAACAGTATCCCTCCTTTCACCCTAAGCCGTCACTaGACAGCCTACTCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: PSTQPIRLFHGRNSIPPFTLSRH*TAYSPG
Trigger: GCCAGGGGAGTAGGCTGTGCAGTGACGGCTTAGGGT...GAAAGGAGGGATACTGTTTCTCCCATGAAATAGTCTAATTGGTTGGGTTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACAGCCTTTGCCATCTGTaGCTGTACACCGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYSLCHL*LYTAGL
Trigger: AAGGCCAGCGGTGTACAGGCACAGATGGCAAAGGCT...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542360.1
CDS-3UTR CCA 90 bp AAAAGGGTATATGTTGGAGTGGGGACTTCACTCGCGCTGGATATGTATTACCCTGATGTCCTGGTTCCCTaGGCAAAGGGTCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: KRVYVGVGTSLALDMYYPDVLVP*AKGPST
Trigger: TGTGCTTGGACCCTTTGCCCAGGGAACCAGGACATC...AGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTCCCTTGGCTGTGAGCTaGAAGGCTCCCCTATGTTTC +
Preference number: 4 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVPLAVS*KAPLCF
Trigger: GAAACATAGGGGAGCCTTCCAGCTCACAGCCAAGGG...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp GGAAGGATTGGTATAACAAGGCACAAGATTTGGAATTTACCCTTTACAGACTGGGGAGTGGAGCTGAAGTaGCCCAACCCAGCGCATGGC +
Preference number: 4 (lower is better)
Translates to: GRIGITRHKIWNLPFTDWGVELK*PNPAHG
Trigger: GCCATGCGCTGGGTTGGGCCACTTCAGCTCCACTCC...CCAGTCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGTTATACCAATCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTGGGTATATGTTGGAGTaGGGACTTCACTCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVGYMLE*GLHSRW
Trigger: CCAGCGCGAGTGAAGTCCCCACTCCAACATATACCC...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp TTTTCTAGCCCCCACCTTCCCAACCCTCAGAGAAGGACAGTAAAGAAATCAGTGAGAACTCCTGGTCTGTaGGTGAAGCAGCAGATCTTC +
Preference number: 4 (lower is better)
Translates to: FSSPHLPNPQRRTVKKSVRTPGL*VKQQIF
Trigger: GAAGATCTGCTGCTTCACTCACAGACCAGGAGTTCT...CACTGATTTCTTTACTGTCCTTCTCTGAGGGTTGGGAAGGTGGGGGCTAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp TCTGGGGAGAATTCAAGGATCCCAGTCCAGTCCTTCCCCAACAGTTGCATGAGTCAGTCTTGGCAATATTaGCCCCTGGAGTCAGATAAT +
Preference number: 4 (lower is better)
Translates to: SGENSRIPVQSFPNSCMSQSWQY*PLESDN
Trigger: ATTATCTGACTCCAGGGGTCAATATTGCCAAGACTG...ACTCATGCAACTGTTGGGGAAGGACTGGACTGGGATCCTTGAATTCTCCCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp GGAAGGATTGGTATAACAAGGCACAAGATTTGGAATTTACCCTTTACAGACTGGCCCAACCCTTGGCTGTaGGCTGGAAGGCTCCCCTAT +
Preference number: 4 (lower is better)
Translates to: GRIGITRHKIWNLPFTDWPNPWL*AGRLPY
Trigger: ATAGGGGAGCCTTCCAGCTCACAGCCAAGGGTTGGG...CCAGTCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGTTATACCAATCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGGGTTGACATTGGAGTaGCAGGCCTCAACTCCCAAT +
Preference number: 4 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYGLTLE*QASTPN
Trigger: ATTGGGAGTTGAGGCCTGTCACTCCAATGTCAACCC...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp TTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGGGTGAGAGAATCGCTTaGACCTGGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: FHIDEKLRPPCLFKVGEKGERIA*TWEAEV
Trigger: AACCTCTGCCTCCCAGGTTCAAGCGATTCTCTCACC...CTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542360.1
CDS-3UTR GCA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTTTGCTTTGCCATCTGTaGCTGTACACCGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVLLCHL*LYTAGL
Trigger: AAGGCCAGCGGTGTACAGGCACAGATGGCAAAGCAA...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262031.10
ENST00000550726.5
ENST00000552247.6
ENST00000552916.5
CDS-3UTR GCA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTGGGTCCTGTTCCTGTTaGTTTGCCATCTGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVGSCSC*FAICAC
Trigger: ACAGGCACAGATGGCAAAGCAACAGGAACAGGACCC...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262031.10
ENST00000550726.5
ENST00000552247.6
ENST00000552916.5
CDS-3UTR GCA 90 bp TTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGGGTTCTGTTGGCCGCTaGTCTCCTCGACTGAAACAC +
Preference number: 4 (lower is better)
Translates to: FHIDEKLRPPCLFKVGEKGSVGR*SPRLKH
Trigger: GTGTTTCAGTCGAGGAGAGCAGCGGCCAACAGAACC...CTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262031.10
ENST00000542360.1
ENST00000550726.5
ENST00000552247.6
ENST00000552916.5
CDS-3UTR GCA 90 bp CCATCAACCCAACCAATTAGACTATTTCATGGGAGAAACAGTATCCCTCCTTTCCCATTATGGTGCCACTaGACTCCAGCCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: PSTQPIRLFHGRNSIPPFPLWCH*TPAWAT
Trigger: TGTGGCCCAGGCTGGAGTGCAGTGGCACCATAATGG...GAAAGGAGGGATACTGTTTCTCCCATGAAATAGTCTAATTGGTTGGGTTGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp GGAAGGATTGGTATAACAAGGCACAAGATTTGGAATTTACCCTTTACAGACTGGAAGCAAGGGATCGGATaGGGCTGGTACTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GRIGITRHKIWNLPFTDWKQGIG*GWYSRG
Trigger: CCCCCTGGAGTACCAGCCCCATCCGATCCCTTGCTT...CCAGTCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGTTATACCAATCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp CATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGAAGCAAGGGATCGGATaGGGCTGGTACTCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: HRKLFHIDEKLRPPCLFKKQGIG*GWYSRG
Trigger: CCCCCTGGAGTACCAGCCCCATCCGATCCCTTGCTT...CTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262031.10
ENST00000542360.1
ENST00000550726.5
ENST00000552247.6
CDS-3UTR CCA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATTCCTTGACTGAGGGCTaGAGACTCAAAAACAAAAGC +
Preference number: 4 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHSLTEG*RLKNKS
Trigger: GCTTTTGTTTTTGAGTCTCCAGCCCTCAGTCAAGGA...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp TTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGAGCCACCAGGCTTCCTaGCCTGGGCAACTCTACAAA +
Preference number: 4 (lower is better)
Translates to: FHIDEKLRPPCLFKVGEKSHQAS*PGQLYK
Trigger: TTTGTAGAGTTGCCCAGGCCAGGAAGCCTGGTGGCT...CTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp TCTGGGGAGAATTCAAGGATCCCAGTCCAGTCCTTCCCCAACAGTTGCATGAGTACTTTTTCATATAGATaGGAAGCTGCGACCACCATG +
Preference number: 4 (lower is better)
Translates to: SGENSRIPVQSFPNSCMSTFSYR*EAATTM
Trigger: CATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGT...ACTCATGCAACTGTTGGGGAAGGACTGGACTGGGATCCTTGAATTCTCCCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAATGTTGCCAAAGGCCTaGGGGACAAAACCACCTCTG +
Preference number: 4 (lower is better)
Translates to: LFHIDEKLRPPCLFKVGEMLPKA*GTKPPL
Trigger: CAGAGGTGGTTTTGTCCCTCAGGCCTTTGGCAACAT...TTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp TTTTCTAGCCCCCACCTTCCCAACCCTCAGAGAAGGACAGTAAAGAAATCAGTGTCCCCAACAGTTGCATaGGTGTCAAAAGGCACTGTT +
Preference number: 4 (lower is better)
Translates to: FSSPHLPNPQRRTVKKSVSPTVA*VSKGTV
Trigger: AACAGTGCCTTTTGACACTCATGCAACTGTTGGGGA...CACTGATTTCTTTACTGTCCTTCTCTGAGGGTTGGGAAGGTGGGGGCTAGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAATCTCCACATCTTCCTaGCCTCTCTACTGGCACCCT +
Preference number: 4 (lower is better)
Translates to: LFHIDEKLRPPCLFKVGEISTSS*PLYWHP
Trigger: AGGGTGCCAGTAGAGAGGTCAGGAAGATGTGGAGAT...TTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGCCAGCGCATGGCCTGTaGAGCAGCAAAGTCTGGTCT +
Preference number: 4 (lower is better)
Translates to: HRKLFHIDEKLRPPCLFKPAHGL*SSKVWS
Trigger: AGACCAGACTTTGCTGCTTCACAGGCCATGCGCTGG...CTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp TACTCCCAAAAAGCTATACCTCAGATGCTGTTGGCCTTGGCAGTGAGAAGAGTTCAACTCCCAATGGGTTaGCATTGGAGTGACAGGAGT +
Preference number: 4 (lower is better)
Translates to: YSQKAIPQMLLALAVRRVQLPMG*HWSDRS
Trigger: ACTCCTGTCACTCCAATGTCAACCCATTGGGAGTTG...AACTCTTCTCACTGCCAAGGCCAACAGCATCTGAGGTATAGCTTTTTGGGAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp CTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAATTGCTTTGCCATCTGTaGCTGTACACCGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: LFHIDEKLRPPCLFKVGELLCHL*LYTAGL
Trigger: AAGGCCAGCGGTGTACAGGCACAGATGGCAAAGCAA...TTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262031.10
ENST00000550726.5
ENST00000552247.6
ENST00000552916.5
CDS-3UTR GCA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTCTGTTCCTGTTGCTTTaGCATCTGTGCCTGTACACC +
Preference number: 4 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVLFLLL*HLCLYT
Trigger: GGTGTACAGGCACAGATGGCAAAGCAACAGGAACAG...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262031.10
ENST00000550726.5
ENST00000552247.6
ENST00000552916.5
CDS-3UTR GCA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACTGTGGACTCCATCCTTaGAAAGCCAACACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYCGLHP*KANTSA
Trigger: AGCAGAGGTGTTGGCTTTGCAAGGATGGAGTCCACA...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262031.10
ENST00000550726.5
ENST00000552247.6
CDS-3UTR GCA 90 bp TTTTCTAGCCCCCACCTTCCCAACCCTCAGAGAAGGACAGTAAAGAAATCAGTGCCTGGGTCACATCTGTaGTTTCTGAAGCCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: FSSPHLPNPQRRTVKKSVPGSHL*FLKPKS
Trigger: AGACTTTGGCTTCAGAAAGCACAGATGTGACCCAGG...CACTGATTTCTTTACTGTCCTTCTCTGAGGGTTGGGAAGGTGGGGGCTAGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACCCCCATCACTTCCCATaGCCAAACCAGAAACACTCA +
Preference number: 4 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYPHHFP*PNQKHS
Trigger: TGAGTGTTTCTGGTTTGGGCATGGGAAGTGATGGGG...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp GTGAGGCAGAGGAGAGGGGAGTGGCAATATCAACAATGGTTTCTATGCGTGAAAGGGCTTGGTAGTATGTaGCTGTACTTCCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: VRQRRGEWQYQQWFLCVKGLGSM*LYFQLL
Trigger: AAGTAGCTGGAAGTACAGGCACATACTACCAAGCCC...TTTCACGCATAGAAACCATTGTTGATATTGCCACTCCCCTCTCCTCTGCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp TTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTTGCACTCCAGCCTTTaGCATCTGTGCCTGTACACC +
Preference number: 4 (lower is better)
Translates to: FHIDEKLRPPCLFKVGEKLHSSL*HLCLYT
Trigger: GGTGTACAGGCACAGATGGCAAAGGCTGGAGTGCAA...CTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542360.1
CDS-3UTR GCA 90 bp TTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTCGAGATCACGCCATTaGACTCCAGCCTTTGCCATC +
Preference number: 4 (lower is better)
Translates to: FHIDEKLRPPCLFKVGEKSRSRH*TPAFAI
Trigger: GATGGCAAAGGCTGGAGTGCAATGGCGTGATCTCGA...CTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542360.1
CDS-3UTR CCA 90 bp GTGAGGCAGAGGAGAGGGGAGTGGCAATATCAACAATGGTTTCTATGCGTGAAACCTCTAGAAGGTTGCTaGGCTTGGGGCTATTTTACA +
Preference number: 4 (lower is better)
Translates to: VRQRRGEWQYQQWFLCVKPLEGC*AWGYFT
Trigger: TGTAAAATAGCCCCAAGCCCAGCAACCTTCTAGAGG...TTTCACGCATAGAAACCATTGTTGATATTGCCACTCCCCTCTCCTCTGCCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTGGCCTCAACTCCCAATaGGTTGACATTGGAGTGACA +
Preference number: 4 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVGLNSQ*VDIGVT
Trigger: TGTCACTCCAATGTCAACCCATTGGGAGTTGAGGCC...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp TACTCCCAAAAAGCTATACCTCAGATGCTGTTGGCCTTGGCAGTGAGAAGAGTTGGACTTCACTCGCGCTaGATATGTATTACCCTCCAG +
Preference number: 4 (lower is better)
Translates to: YSQKAIPQMLLALAVRRVGLHSR*ICITLQ
Trigger: CTGGAGGGTAATACATATCCAGCGCGAGTGAAGTCC...AACTCTTCTCACTGCCAAGGCCAACAGCATCTGAGGTATAGCTTTTTGGGAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp CTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGCAAGGGATCGGATaGGGCTTGCAAAGCCAACAC +
Preference number: 4 (lower is better)
Translates to: LFHIDEKLRPPCLFKVGEKQGIG*GLQSQH
Trigger: GTGTTGGCTTTGCAAGCCCCATCCGATCCCTTGCTT...TTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552916.5
CDS-3UTR TCA 90 bp CCAATACATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCCATAGGTCAAGGCCATaGCGCCCATGTCTGCATTCC +
Preference number: 4 (lower is better)
Translates to: PIHRKLFHIDEKLRPPCLHRSRP*RPCLHS
Trigger: GGAATGCAGACATGGGCGTCATGGCCTTGACCTATG...GAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATGTATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262031.10
ENST00000542360.1
ENST00000552916.5
CDS-3UTR TCA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTAGGAGATGGGGTGCATaGGCTGAGAGCTTTACAAAA +
Preference number: 4 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVRRWGA*AESFTK
Trigger: TTTTGTAAAGCTCTCAGCTCATGCACCCCATCTCCT...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAACTAAGGGAGGGTGAGTaGGCTGATTGTCAAGTTAGG +
Preference number: 4 (lower is better)
Translates to: LFHIDEKLRPPCLFKVGELREGE*ADCQVR
Trigger: CCTAACTTGACAATCAGCTCACTCACCCTCCCTTAG...TTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp GCAGAGTTATCAAAAGTCAAAGTCTGGGGAGAATTCAAGGATCCCAGTCCAGTCTCTCACAGCATCATATaGCGCAAAGTAACAGCCCAC +
Preference number: 4 (lower is better)
Translates to: AELSKVKVWGEFKDPSPVSHSII*RKVTAH
Trigger: GTGGGCTGTTACTTTGCGTCATATGATGCTGTGAGA...GACTGGACTGGGATCCTTGAATTCTCCCCAGACTTTGACTTTTGATAACTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp GCTCTTTCAAGAATCACTCTTGCTATATGCAGAGTTATCAAAAGTCAAAGTCTGACCCACCCTCGTCTCTaGAGCCTGCTGATTCAGGGC +
Preference number: 4 (lower is better)
Translates to: ALSRITLAICRVIKSQSLTHPRL*SLLIQG
Trigger: GCCCTGAATCAGCAGGCTTCAGAGACGAGGGTGGGT...CAGACTTTGACTTTTGATAACTCTGCATATAGCAAGAGTGATTCTTGAAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp CTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAATGTGGACTCCATCCTTaGAAAGCCAACACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LFHIDEKLRPPCLFKVGECGLHP*KANTSA
Trigger: AGCAGAGGTGTTGGCTTTGCAAGGATGGAGTCCACA...TTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262031.10
ENST00000550726.5
ENST00000552247.6
CDS-3UTR GCA 90 bp CCAATACATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCGGTTCTGTTGGCCGCTaGTCTCCTCGACTGAAACAC +
Preference number: 4 (lower is better)
Translates to: PIHRKLFHIDEKLRPPCLGSVGR*SPRLKH
Trigger: GTGTTTCAGTCGAGGAGAGCAGCGGCCAACAGAACC...GAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATGTATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262031.10
ENST00000542360.1
ENST00000552916.5
CDS-3UTR GCA 90 bp GCAGAGTTATCAAAAGTCAAAGTCTGGGGAGAATTCAAGGATCCCAGTCCAGTCCATTCTTCCGGAACTTaGCAGGGAAGACCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: AELSKVKVWGEFKDPSPVHSSGT*QGRPSL
Trigger: AAGACTAGGTCTTCCCTGGCAAGTTCCGGAAGAATG...GACTGGACTGGGATCCTTGAATTCTCCCCAGACTTTGACTTTTGATAACTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp TACTCCCAAAAAGCTATACCTCAGATGCTGTTGGCCTTGGCAGTGAGAAGAGTTCAGTCTGGTTTTAGCTaGCAACTCCTATGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: YSQKAIPQMLLALAVRRVQSGFS*QLLWKS
Trigger: GGACTTCCATAGGAGTTGGCAGCTAAAACCAGACTG...AACTCTTCTCACTGCCAAGGCCAACAGCATCTGAGGTATAGCTTTTTGGGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp CCATCAACCCAACCAATTAGACTATTTCATGGGAGAAACAGTATCCCTCCTTTCCAAAGGGGGATTCAGTaGATCCAGGTCCTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: PSTQPIRLFHGRNSIPPFQRGIQ*IQVLPC
Trigger: ACAAGGCAGGACCTGGATGCACTGAATCCCCCTTTG...GAAAGGAGGGATACTGTTTCTCCCATGAAATAGTCTAATTGGTTGGGTTGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp TACTCCCAAAAAGCTATACCTCAGATGCTGTTGGCCTTGGCAGTGAGAAGAGTTTGTGTGCATTCAGCATaGAGCCACAGCTCTTTCAAG +
Preference number: 4 (lower is better)
Translates to: YSQKAIPQMLLALAVRRVCVHSA*SHSSFK
Trigger: CTTGAAAGAGCTGTGGCTCCATGCTGAATGCACACA...AACTCTTCTCACTGCCAAGGCCAACAGCATCTGAGGTATAGCTTTTTGGGAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp GCAGAGTTATCAAAAGTCAAAGTCTGGGGAGAATTCAAGGATCCCAGTCCAGTCTTATTTCTGATGTCCTaGTTCCCTGGGCAAAGGGTC +
Preference number: 4 (lower is better)
Translates to: AELSKVKVWGEFKDPSPVLFLMS*FPGQRV
Trigger: GACCCTTTGCCCAGGGAACCAGGACATCAGAAATAA...GACTGGACTGGGATCCTTGAATTCTCCCCAGACTTTGACTTTTGATAACTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTGAAGGTTGCTGGGCTTaGGGCTATTTTACACTGGAT +
Preference number: 4 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVEGCWA*GYFTLD
Trigger: ATCCAGTGTAAAATAGCCCCAAGCCCAGCAACCTTC...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp TTTTCTAGCCCCCACCTTCCCAACCCTCAGAGAAGGACAGTAAAGAAATCAGTGCAGAGGAGAGGGGAGTaGCAATATCAACAATGGTTT +
Preference number: 4 (lower is better)
Translates to: FSSPHLPNPQRRTVKKSVQRRGE*QYQQWF
Trigger: AAACCATTGTTGATATTGCCACTCCCCTCTCCTCTG...CACTGATTTCTTTACTGTCCTTCTCTGAGGGTTGGGAAGGTGGGGGCTAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp TGTTTTCTCTTTCTCTCAAAGGCCACTGACAAGAAAGCAGCTATGGTATATTTTATAGTCCCAGCTACTTaGTGGCCGGGGAAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: CFLFLSKATDKKAAMVYFIVPAT*WPGKGW
Trigger: CCACCCCTTCCCCGGCCACCAAGTAGCTGGGACTAT...AAAATATACCATAGCTGCTTTCTTGTCAGTGGCCTTTGAGAGAAAGAGAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp TTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGCCAGGCTTCCTGGCCTaGGCAACTCTACAAATTCTT +
Preference number: 4 (lower is better)
Translates to: FHIDEKLRPPCLFKVGEKPGFLA*ATLQIL
Trigger: AAGAATTTGTAGAGTTGCCCAGGCCAGGAAGCCTGG...CTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp GTGAGGCAGAGGAGAGGGGAGTGGCAATATCAACAATGGTTTCTATGCGTGAAAAAAAAGGGTATATGTTaGAGTGGGGACTTCACTCGC +
Preference number: 4 (lower is better)
Translates to: VRQRRGEWQYQQWFLCVKKKGIC*SGDFTR
Trigger: GCGAGTGAAGTCCCCACTCCAACATATACCCTTTTT...TTTCACGCATAGAAACCATTGTTGATATTGCCACTCCCCTCTCCTCTGCCTCAC
47% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp AAAAGGGTATATGTTGGAGTGGGGACTTCACTCGCGCTGGATATGTATTACCCTTCCTGCCTAAATGTCTaGCTGAGTTGCTGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: KRVYVGVGTSLALDMYYPSCLNV*LSCWSK
Trigger: TTTGCTCCAGCAACTCAGCCAGACATTTAGGCAGGA...AGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CAA 72 bp AGCCTAATGAACACCTGTCTCTCTATCCTCCATTATTaGCCTTTGTCTGACTGTCTAGTGGAGAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: SLMNTCLSILHY*PLSDCLVERHL
Trigger: CAGGTGCCTCTCCACTAGACAGTCAGACAAAGGCAAATAATGGAGGATAGAGAGACAGGTGTTCATTAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CAA 72 bp GCAAAGAGGTGTTTACCCACCCAAAAAGGGTATATGTaGGAGTGGGGACTTCACTCGCGCTGGATATGTATT +
Preference number: 4 (lower is better)
Translates to: AKRCLPTQKGYM*EWGLHSRWICI
Trigger: AATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTTTGGGTGGGTAAACACCTCTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACATCTTGCCATATGGCTaGCACAGCTTGACAAGATCT +
Preference number: 4 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYILPYG*HSLTRS
Trigger: AGATCTTGTCAAGCTGTGTCAGCCATATGGCAAGAT...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262031.10
ENST00000552247.6
CDS-3UTR TCA 90 bp GCAGAGTTATCAAAAGTCAAAGTCTGGGGAGAATTCAAGGATCCCAGTCCAGTCTGTTGGCCTTGGCAGTaGGAAGAGTTGATAAAAGTC +
Preference number: 4 (lower is better)
Translates to: AELSKVKVWGEFKDPSPVCWPWQ*EELIKV
Trigger: GACTTTTATCAACTCTTCTCACTGCCAAGGCCAACA...GACTGGACTGGGATCCTTGAATTCTCCCCAGACTTTGACTTTTGATAACTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp AAAAGGGTATATGTTGGAGTGGGGACTTCACTCGCGCTGGATATGTATTACCCTTTATTTGCCTTTGTCTaGCTGTCTAGTGGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: KRVYVGVGTSLALDMYYPLFAFV*LSSGEA
Trigger: TGCCTCTCCACTAGACAGTCAGACAAAGGCAAATAA...AGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTATGGTATATTTTCCTTaGCTGAGGGCTGGAGACTCA +
Preference number: 4 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVMVYFP*LRAGDS
Trigger: TGAGTCTCCAGCCCTCAGTCAAGGAAAATATACCAT...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp TTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTCTCTCAAAGGCCACTaGCAAGAAAGCAGCTATGGT +
Preference number: 4 (lower is better)
Translates to: FHIDEKLRPPCLFKVGEKSLKGH*QESSYG
Trigger: ACCATAGCTGCTTTCTTGTCAGTGGCCTTTGAGAGA...CTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp GCAGAGTTATCAAAAGTCAAAGTCTGGGGAGAATTCAAGGATCCCAGTCCAGTCAATGGTTTCTATGCGTaGAAGGCCCTTCCTAAACCT +
Preference number: 4 (lower is better)
Translates to: AELSKVKVWGEFKDPSPVNGFYA*KALPKP
Trigger: AGGTTTAGGAAGGGCCTTTCACGCATAGAAACCATT...GACTGGACTGGGATCCTTGAATTCTCCCCAGACTTTGACTTTTGATAACTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTAAGGATTATGCCATCTaGGGAAAGGACTCTAGTGTG +
Preference number: 4 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVKDYAI*GKDSSV
Trigger: CACACTAGAGTCCTTTCCTCAGATGGCATAATCCTT...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACAATCAGTTTAGGGTCTaGGTATCATCTCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYNQFRV*VSSQSL
Trigger: CAGGCTCTGAGATGATACTCAGACCCTAAACTGATT...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp TCTGGGGAGAATTCAAGGATCCCAGTCCAGTCCTTCCCCAACAGTTGCATGAGTGATCTGCTTGGAGAATaGAGGTTTATTCAAAACAAG +
Preference number: 4 (lower is better)
Translates to: SGENSRIPVQSFPNSCMSDLLGE*RFIQNK
Trigger: CTTGTTTTGAATAAACCTTCATTCTCCAAGCAGATC...ACTCATGCAACTGTTGGGGAAGGACTGGACTGGGATCCTTGAATTCTCCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp CATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGTTGCTTTGCCATCTGTaGCTGTACACCGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: HRKLFHIDEKLRPPCLFKLLCHL*LYTAGL
Trigger: AAGGCCAGCGGTGTACAGGCACAGATGGCAAAGCAA...CTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262031.10
ENST00000550726.5
ENST00000552247.6
ENST00000552916.5
CDS-3UTR GCA 90 bp GGAAGGATTGGTATAACAAGGCACAAGATTTGGAATTTACCCTTTACAGACTGGGGGTCCTGTTCCTGTTaGTTTGCCATCTGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: GRIGITRHKIWNLPFTDWGSCSC*FAICAC
Trigger: ACAGGCACAGATGGCAAAGCAACAGGAACAGGACCC...CCAGTCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGTTATACCAATCCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp CATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGGGTCCTGTTCCTGTTaGTTTGCCATCTGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: HRKLFHIDEKLRPPCLFKGSCSC*FAICAC
Trigger: ACAGGCACAGATGGCAAAGCAACAGGAACAGGACCC...CTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262031.10
ENST00000550726.5
ENST00000552247.6
ENST00000552916.5
CDS-3UTR GCA 90 bp AATTTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAGCCTACTTAGTGTTCTaGCTTGTTCCTTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: NFRNLLMRGRIENVGSTEAYLVF*LVPCPA
Trigger: GGCTGGGCAAGGAACAAGGCAGAACACTAAGTAGGC...TTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTGAATTTATTGCTCTTTaGTACCCTAGCTCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVEFIAL*YPSSPL
Trigger: CAACGGGGAGCTAGGGTAGCAAAGAGCAATAAATTC...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp GTGAGGCAGAGGAGAGGGGAGTGGCAATATCAACAATGGTTTCTATGCGTGAAAGCCTATAAAGGATTATaGCATCTGAGGAAAGGACTC +
Preference number: 4 (lower is better)
Translates to: VRQRRGEWQYQQWFLCVKAYKGL*HLRKGL
Trigger: GAGTCCTTTCCTCAGATGGCATAATCCTTTATAGGC...TTTCACGCATAGAAACCATTGTTGATATTGCCACTCCCCTCTCCTCTGCCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp TTTTCTAGCCCCCACCTTCCCAACCCTCAGAGAAGGACAGTAAAGAAATCAGTGCAAAAATTAGCTGTTTaGAGGTCAGGAGTTGGACAC +
Preference number: 4 (lower is better)
Translates to: FSSPHLPNPQRRTVKKSVQKLAV*RSGVGH
Trigger: GTGTCCAACTCCTGACCTCCAAACAGCTAATTTTTG...CACTGATTTCTTTACTGTCCTTCTCTGAGGGTTGGGAAGGTGGGGGCTAGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp CCATCAACCCAACCAATTAGACTATTTCATGGGAGAAACAGTATCCCTCCTTTCAGTTCAACACCAGCCTaGGCAATGTGGCAAAACCCT +
Preference number: 4 (lower is better)
Translates to: PSTQPIRLFHGRNSIPPFSSTPA*AMWQNP
Trigger: AGGGTTTTGCCACATTGCCCAGGCTGGTGTTGAACT...GAAAGGAGGGATACTGTTTCTCCCATGAAATAGTCTAATTGGTTGGGTTGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp CCATCAACCCAACCAATTAGACTATTTCATGGGAGAAACAGTATCCCTCCTTTCAGCTGCCAACTCCTATaGAAGTCCATAGCTGACTCC +
Preference number: 4 (lower is better)
Translates to: PSTQPIRLFHGRNSIPPFSCQLL*KSIADS
Trigger: GGAGTCAGCTATGGACTTCCATAGGAGTTGGCAGCT...GAAAGGAGGGATACTGTTTCTCCCATGAAATAGTCTAATTGGTTGGGTTGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp AAAAGGGTATATGTTGGAGTGGGGACTTCACTCGCGCTGGATATGTATTACCCTGACAGACTCCCTCTTTaGTGTTTGGTTACCTTCACA +
Preference number: 4 (lower is better)
Translates to: KRVYVGVGTSLALDMYYPDRLPL*CLVTFT
Trigger: TGTGAAGGTAACCAAACACCAAAGAGGGAGTCTGTC...AGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACACTTTTTCATATAGATaGGAAGCTGCGACCACCATG +
Preference number: 4 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYTFSYR*EAATTM
Trigger: CATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGT...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000262031.10
ENST00000542360.1
ENST00000550726.5
ENST00000552247.6
ENST00000552916.5
CDS-3UTR TCA 90 bp AAAAGGGTATATGTTGGAGTGGGGACTTCACTCGCGCTGGATATGTATTACCCTATGGGGTGCATGAGCTaGGAGCTTTACAAAATAACA +
Preference number: 4 (lower is better)
Translates to: KRVYVGVGTSLALDMYYPMGCMS*ELYKIT
Trigger: TGTTATTTTGTAAAGCTCTCAGCTCATGCACCCCAT...AGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp TTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAATATGTCCAGGGTTGGGGTaGAAATTTACCCTAACCCAG +
Preference number: 4 (lower is better)
Translates to: FRNLLMRGRIENVGSTEICPGLG*KFTLTQ
Trigger: CTGGGTTAGGGTAAATTTTCACCCCAACCCTGGACA...TATTTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp AATTTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAACCACCTGAATCCCTCTaGGTACATGTGTGCATTCAG +
Preference number: 4 (lower is better)
Translates to: NFRNLLMRGRIENVGSTEPPESL*VHVCIQ
Trigger: CTGAATGCACACATGTACTCAGAGGGATTCAGGTGG...TTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CCATCAACCCAACCAATTAGACTATTTCATGGGAGAAACAGTATCCCTCCTTTCAAGGAACATTATTTCTaGTGTCCTGGTTCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PSTQPIRLFHGRNSIPPFKEHYF*CPGSLG
Trigger: GCCCAGGGAACCAGGACATCAGAAATAATGTTCCTT...GAAAGGAGGGATACTGTTTCTCCCATGAAATAGTCTAATTGGTTGGGTTGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp TGTTTTCTCTTTCTCTCAAAGGCCACTGACAAGAAAGCAGCTATGGTATATTTTGGCAGGAGAACTGCTTaGACCCAGGAGATGGAGGTT +
Preference number: 4 (lower is better)
Translates to: CFLFLSKATDKKAAMVYFGRRTA*TQEMEV
Trigger: AACCTCCATCTCCTGGGTTCAAGCAGTTCTCCTGCC...AAAATATACCATAGCTGCTTTCTTGTCAGTGGCCTTTGAGAGAAAGAGAAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp TACTCCCAAAAAGCTATACCTCAGATGCTGTTGGCCTTGGCAGTGAGAAGAGTTGGAAGGCCTACCAAATaGGGAAATTTCAGGAATTTG +
Preference number: 4 (lower is better)
Translates to: YSQKAIPQMLLALAVRRVGRPTK*GNFRNL
Trigger: CAAATTCCTGAAATTTCCTCATTTGGTAGGCCTTCC...AACTCTTCTCACTGCCAAGGCCAACAGCATCTGAGGTATAGCTTTTTGGGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CCAATACATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCATGGAAGTCCATAGCTaGCTCCTATGGAAGGCCTAC +
Preference number: 4 (lower is better)
Translates to: PIHRKLFHIDEKLRPPCLMEVHS*LLWKAY
Trigger: GTAGGCCTTCCATAGGAGTCAGCTATGGACTTCCAT...GAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATGTATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGCAAAGCCATAGCGGCTaGCACAGCTTGACAAGATCT +
Preference number: 4 (lower is better)
Translates to: HRKLFHIDEKLRPPCLFKQSHSG*HSLTRS
Trigger: AGATCTTGTCAAGCTGTGTCAGCCGCTATGGCTTTG...CTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552916.5
CDS-3UTR GCA 90 bp GGAAGGATTGGTATAACAAGGCACAAGATTTGGAATTTACCCTTTACAGACTGGTGTGGACTCCATCCTTaGAAAGCCAACACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GRIGITRHKIWNLPFTDWCGLHP*KANTSA
Trigger: AGCAGAGGTGTTGGCTTTGCAAGGATGGAGTCCACA...CCAGTCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGTTATACCAATCCTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTGGAAGTTTGGGGATCTaGTTGGAGAATGAAGGTTTA +
Preference number: 4 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVGSLGI*LENEGL
Trigger: TAAACCTTCATTCTCCAAGCAGATCCCCAAACTTCC...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp GCTCTTTCAAGAATCACTCTTGCTATATGCAGAGTTATCAAAAGTCAAAGTCTGCCCAGCTTCCTAAGCTaGCACCTCTGTGTTCCTGTC +
Preference number: 4 (lower is better)
Translates to: ALSRITLAICRVIKSQSLPSFLS*HLCVPV
Trigger: GACAGGAACACAGAGGTGGCAGCTTAGGAAGCTGGG...CAGACTTTGACTTTTGATAACTCTGCATATAGCAAGAGTGATTCTTGAAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTAACAATCTTGCCATATaGCTGACACAGCTTGACAAG +
Preference number: 4 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVNNLAI*LTQLDK
Trigger: CTTGTCAAGCTGTGTCAGCCATATGGCAAGATTGTT...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262031.10
ENST00000552247.6
CDS-3UTR CCA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACAACAATCTTGCCATATaGCTGACACAGCTTGACAAG +
Preference number: 4 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYNNLAI*LTQLDK
Trigger: CTTGTCAAGCTGTGTCAGCCATATGGCAAGATTGTT...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262031.10
ENST00000552247.6
CDS-3UTR CCA 90 bp CCATCAACCCAACCAATTAGACTATTTCATGGGAGAAACAGTATCCCTCCTTTCAGATCTTCCACCGTGTaGAAGGAGCCTATGTGGATT +
Preference number: 4 (lower is better)
Translates to: PSTQPIRLFHGRNSIPPFRSSTV*KEPMWI
Trigger: AATCCACATAGGCTCCTTCCACACGGTGGAAGATCT...GAAAGGAGGGATACTGTTTCTCCCATGAAATAGTCTAATTGGTTGGGTTGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACTCAAAAGTCAAAGTCTaGGGAGAATTCAAGGATCCC +
Preference number: 4 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYSKVKV*GEFKDP
Trigger: GGGATCCTTGAATTCTCCCCAGACTTTGACTTTTGA...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp GCTCTTTCAAGAATCACTCTTGCTATATGCAGAGTTATCAAAAGTCAAAGTCTGTTGGAGGTCAGGAGTTaGACACTAGCCTGGCCAACG +
Preference number: 4 (lower is better)
Translates to: ALSRITLAICRVIKSQSLLEVRS*TLAWPT
Trigger: CGTTGGCCAGGCTAGTGTCCAACTCCTGACCTCCAA...CAGACTTTGACTTTTGATAACTCTGCATATAGCAAGAGTGATTCTTGAAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp AATTTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAGGAAAGGAAAACGAATaGAGTGGAGCTGAAGTGGCC +
Preference number: 4 (lower is better)
Translates to: NFRNLLMRGRIENVGSTEGKENE*SGAEVA
Trigger: GGCCACTTCAGCTCCACTCCATTCGTTTTCCTTTCC...TTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp TTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGAAGGACAAGGAAGTTTaGGGATCTGCTTGGAGAATG +
Preference number: 4 (lower is better)
Translates to: FHIDEKLRPPCLFKVGEKKDKEV*GSAWRM
Trigger: CATTCTCCAAGCAGATCCCCAAACTTCCTTGTCCTT...CTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CAA 72 bp TGGGGCTATTTTACACTGGATAAGCCCTTCCTGAGTTaGGAAGCATCAATTAGAAGACTGCGGCAATTTGTC +
Preference number: 4 (lower is better)
Translates to: WGYFTLDKPFLS*EASIRRLRQFV
Trigger: GACAAATTGCCGCAGTCTTCTAATTGATGCTTCCAAACTCAGGAAGGGCTTATCCAGTGTAAAATAGCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAACTTTTTCATATAGATaGGAAGCTGCGACCACCATG +
Preference number: 4 (lower is better)
Translates to: LFHIDEKLRPPCLFKVGETFSYR*EAATTM
Trigger: CATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGT...TTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262031.10
ENST00000542360.1
ENST00000550726.5
ENST00000552247.6
ENST00000552916.5
CDS-3UTR TCA 90 bp CCAATACATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCAAAACCACCTCTGATTaGGAACTCCTGGTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PIHRKLFHIDEKLRPPCLKTTSD*ELLVCE
Trigger: CTCACAGACCAGGAGTTCTCAATCAGAGGTGGTTTT...GAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATGTATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CCATCAACCCAACCAATTAGACTATTTCATGGGAGAAACAGTATCCCTCCTTTCGCCGAGCTCTACTTGTaGCAACTGATACTACAGTTT +
Preference number: 4 (lower is better)
Translates to: PSTQPIRLFHGRNSIPPFAELYL*QLILQF
Trigger: AAACTGTAGTATCAGTTGTCACAAGTAGAGCTCGGC...GAAAGGAGGGATACTGTTTCTCCCATGAAATAGTCTAATTGGTTGGGTTGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp AAAAGGGTATATGTTGGAGTGGGGACTTCACTCGCGCTGGATATGTATTACCCTCTCCTTATCTGTTACTaGCAAGGTCTATTACCCTTT +
Preference number: 4 (lower is better)
Translates to: KRVYVGVGTSLALDMYYPLLICY*QGLLPF
Trigger: AAAGGGTAATAGACCTTGTCAGTAACAGATAAGGAG...AGGGTAATACATATCCAGCGCGAGTGAAGTCCCCACTCCAACATATACCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CCAATACATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCCCTGTTGTTGAATTGTaGGGTTGTGAGGTAGACGTG +
Preference number: 4 (lower is better)
Translates to: PIHRKLFHIDEKLRPPCLPVVEL*GCEVDV
Trigger: CACGTCTACCTCACAACCTCACAATTCAACAACAGG...GAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATGTATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp CTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAAGAAGGCATAATATaGGTGAAGAGGAGATGGGGT +
Preference number: 4 (lower is better)
Translates to: LFHIDEKLRPPCLFKVGEKEGII*VKRRWG
Trigger: ACCCCATCTCCTCTTCACCCATATTATGCCTTCTTT...TTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp CCAATACATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCGTGTTCCCAGGGCTGTaGAGTTGTCTCTTTAGTAAG +
Preference number: 4 (lower is better)
Translates to: PIHRKLFHIDEKLRPPCLVFPGL*SCLFSK
Trigger: CTTACTAAAGAGACAACTCCACAGCCCTGGGAACAC...GAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATGTATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp GGAAGGATTGGTATAACAAGGCACAAGATTTGGAATTTACCCTTTACAGACTGGGTCTTCAACCAAGTTTaGCTCAAGGGTGTGTTCCCA +
Preference number: 4 (lower is better)
Translates to: GRIGITRHKIWNLPFTDWVFNQV*LKGVFP
Trigger: TGGGAACACACCCTTGAGCCAAACTTGGTTGAAGAC...CCAGTCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGTTATACCAATCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp TGTTTTCTCTTTCTCTCAAAGGCCACTGACAAGAAAGCAGCTATGGTATATTTTGTAATCATAGCACTTTaGGAGGCTGAGGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: CFLFLSKATDKKAAMVYFVIIAL*EAEVGG
Trigger: GCCTCCCACCTCAGCCTCCCAAAGTGCTATGATTAC...AAAATATACCATAGCTGCTTTCTTGTCAGTGGCCTTTGAGAGAAAGAGAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp TTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAATAACTCTGCTCCTATGCTaGTGTCCTCCAACCATTACT +
Preference number: 4 (lower is better)
Translates to: FRNLLMRGRIENVGSTEITLLLC*CPPTIT
Trigger: AGTAATGGTTGGAGGACACCAGCATAGGAGCAGAGT...TATTTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp CTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAATCCCTCTTTGGTGTTTaGTTACCTTCACAGCTATAC +
Preference number: 4 (lower is better)
Translates to: LFHIDEKLRPPCLFKVGESLFGV*LPSQLY
Trigger: GTATAGCTGTGAAGGTAACCAAACACCAAAGAGGGA...TTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CAA 72 bp TGGATATGTATTACCCTCCAGCCTGGAAACTTTGTCTaGGTGCAACCCCCTAAACTGTATGTTAAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: WICITLQPGNFV*VQPPKLYVKVE
Trigger: TTCTACCTTAACATACAGTTTAGGGGGTTGCACCAAGACAAAGTTTCCAGGCTGGAGGGTAATACATATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGATCTTGCCATATGGCTaGCACAGCTTGACAAGATCT +
Preference number: 4 (lower is better)
Translates to: HRKLFHIDEKLRPPCLFKILPYG*HSLTRS
Trigger: AGATCTTGTCAAGCTGTGTCAGCCATATGGCAAGAT...CTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262031.10
ENST00000552247.6
CDS-3UTR TCA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTACAAGTAGATTCACATaGGAAGAACTCCAAAAGGTA +
Preference number: 4 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVTSRFT*EELQKV
Trigger: TACCTTTTGGAGTTCTTCTCATGTGAATCTACTTGT...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CCATCAACCCAACCAATTAGACTATTTCATGGGAGAAACAGTATCCCTCCTTTCTGTAATGAGTGGGGGTaGGATGTAAAGTACAAAGAG +
Preference number: 4 (lower is better)
Translates to: PSTQPIRLFHGRNSIPPFCNEWG*DVKYKE
Trigger: CTCTTTGTACTTTACATCTCACCCCCACTCATTACA...GAAAGGAGGGATACTGTTTCTCCCATGAAATAGTCTAATTGGTTGGGTTGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp GCTCTTTCAAGAATCACTCTTGCTATATGCAGAGTTATCAAAAGTCAAAGTCTGGTCCTTTCCCACCATTaGACAGCACACACCAGAACA +
Preference number: 4 (lower is better)
Translates to: ALSRITLAICRVIKSQSLVLSHH*TAHTRT
Trigger: TGTTCTGGTGTGTGCTGTGCAATGGTGGGAAAGGAC...CAGACTTTGACTTTTGATAACTCTGCATATAGCAAGAGTGATTCTTGAAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp TGTTTTCTCTTTCTCTCAAAGGCCACTGACAAGAAAGCAGCTATGGTATATTTTAGCCCTCTAGAAGGTTaGTGGGCTTGGGGCTATTTT +
Preference number: 4 (lower is better)
Translates to: CFLFLSKATDKKAAMVYFSPLEG*WAWGYF
Trigger: AAAATAGCCCCAAGCCCAGCAACCTTCTAGAGGGCT...AAAATATACCATAGCTGCTTTCTTGTCAGTGGCCTTTGAGAGAAAGAGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp TTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAATAACCCACCCAGTTTATTaGCCTTGGCTAAGAATGCAA +
Preference number: 4 (lower is better)
Translates to: FRNLLMRGRIENVGSTEITHPVY*PWLRMQ
Trigger: TTGCATTCTTAGCCAAGGGCAATAAACTGGGTGGGT...TATTTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp CCATCAACCCAACCAATTAGACTATTTCATGGGAGAAACAGTATCCCTCCTTTCTTAAGTTCTAAACTCTaGTCCTATGCTGGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: PSTQPIRLFHGRNSIPPFLSSKL*SYAGVL
Trigger: GAGGACACCAGCATAGGAGCAGAGTTTAGAACTTAA...GAAAGGAGGGATACTGTTTCTCCCATGAAATAGTCTAATTGGTTGGGTTGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp CATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGTATTACCCTCCAGCCTaGAAACTTTGTCTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: HRKLFHIDEKLRPPCLFKYYPPA*KLCLGA
Trigger: TGCACCAAGACAAAGTTTCCAGGCTGGAGGGTAATA...CTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CAA 72 bp TTCAGCATGGAGCCACAGCTCTTTCAAGAATCACTCTaGCTATATGCAGAGTTATCAAAAGTCAAAGTCTGG +
Preference number: 4 (lower is better)
Translates to: FSMEPQLFQESL*LYAELSKVKVW
Trigger: CCAGACTTTGACTTTTGATAACTCTGCATATAGCAAGAGTGATTCTTGAAAGAGCTGTGGCTCCATGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAATTTTTAAAGGACTCCTaGCCTCATAAAGAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LFHIDEKLRPPCLFKVGEFLKDS*PHKELE
Trigger: TTCCAACTCTTTATGAGGTCAGGAGTCCTTTAAAAA...TTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp TTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAATATGGATAAGCCCTTCCTaGGTTTGGAAGCATCAATTA +
Preference number: 4 (lower is better)
Translates to: FRNLLMRGRIENVGSTEIWISPS*VWKHQL
Trigger: TAATTGATGCTTCCAAACTCAGGAAGGGCTTATCCA...TATTTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp CCAATACATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCCCCTATGTTTCCTTCTaGCATCAACCCAACCAATTA +
Preference number: 4 (lower is better)
Translates to: PIHRKLFHIDEKLRPPCLPYVSF*HQPNQL
Trigger: TAATTGGTTGGGTTGATGGCAGAAGGAAACATAGGG...GAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATGTATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp GCTCTTTCAAGAATCACTCTTGCTATATGCAGAGTTATCAAAAGTCAAAGTCTGCCAGTTTATTGCCCTTaGCTAAGAATGCAAAGCCCC +
Preference number: 4 (lower is better)
Translates to: ALSRITLAICRVIKSQSLPVYCP*LRMQSP
Trigger: GGGGCTTTGCATTCTTAGCCAAGGGCAATAAACTGG...CAGACTTTGACTTTTGATAACTCTGCATATAGCAAGAGTGATTCTTGAAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp TGTTTTCTCTTTCTCTCAAAGGCCACTGACAAGAAAGCAGCTATGGTATATTTTTACCCTCTGTGTGGATaGAAAGGGTCATTAGTGCTC +
Preference number: 4 (lower is better)
Translates to: CFLFLSKATDKKAAMVYFYPLCG*KGSLVL
Trigger: GAGCACTAATGACCCTTTCCATCCACACAGAGGGTA...AAAATATACCATAGCTGCTTTCTTGTCAGTGGCCTTTGAGAGAAAGAGAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp TGTTTTCTCTTTCTCTCAAAGGCCACTGACAAGAAAGCAGCTATGGTATATTTTTGGGATAGGTATGACTaGCTTAAGAGACCACAGGCA +
Preference number: 4 (lower is better)
Translates to: CFLFLSKATDKKAAMVYFWDRYD*LKRPQA
Trigger: TGCCTGTGGTCTCTTAAGCCAGTCATACCTATCCCA...AAAATATACCATAGCTGCTTTCTTGTCAGTGGCCTTTGAGAGAAAGAGAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp CATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGTTCCTAGAAGATGGGTaGAGTCTTTCTTCAATCTGT +
Preference number: 4 (lower is better)
Translates to: HRKLFHIDEKLRPPCLFKFLEDG*SLSSIC
Trigger: ACAGATTGAAGAAAGACTTCACCCATCTTCTAGGAA...CTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp TTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAATATATATTTTCCTTGACTaGGGGCTGGAGACTCAAAAA +
Preference number: 4 (lower is better)
Translates to: FRNLLMRGRIENVGSTEIYIFLD*GLETQK
Trigger: TTTTTGAGTCTCCAGCCCTCAGTCAAGGAAAATATA...TATTTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp TTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAATATGTGTTCTAGCTGACTaGAAACAGAAAAATGCCAAG +
Preference number: 4 (lower is better)
Translates to: FRNLLMRGRIENVGSTEICVLAD*KQKNAK
Trigger: CTTGGCATTTTTCTGTTTTCAGTCAGCTAGAACACA...TATTTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR GCA 90 bp CCAATACATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTATAGAGTCACATCTTaGAGAAGGGGACAGTTAAAG +
Preference number: 4 (lower is better)
Translates to: PIHRKLFHIDEKLRPPCLYRVTS*RRGQLK
Trigger: CTTTAACTGTCCCCTTCTGCAAGATGTGACTCTATA...GAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATGTATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp CCATCAACCCAACCAATTAGACTATTTCATGGGAGAAACAGTATCCCTCCTTTCACAAGGCACAAGATTTaGAATTTACCCTTTACAGAC +
Preference number: 4 (lower is better)
Translates to: PSTQPIRLFHGRNSIPPFTRHKI*NLPFTD
Trigger: GTCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGT...GAAAGGAGGGATACTGTTTCTCCCATGAAATAGTCTAATTGGTTGGGTTGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp GCTCTTTCAAGAATCACTCTTGCTATATGCAGAGTTATCAAAAGTCAAAGTCTGTCCATACCCTCTGTGTaGATGGAAAGGGTCATTAGT +
Preference number: 4 (lower is better)
Translates to: ALSRITLAICRVIKSQSLSIPSV*MERVIS
Trigger: ACTAATGACCCTTTCCATCCACACAGAGGGTATGGA...CAGACTTTGACTTTTGATAACTCTGCATATAGCAAGAGTGATTCTTGAAAGAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp GGAAGGATTGGTATAACAAGGCACAAGATTTGGAATTTACCCTTTACAGACTGGTCTACTTGTGACAACTaGTACTACAGTTTCTTTTCC +
Preference number: 4 (lower is better)
Translates to: GRIGITRHKIWNLPFTDWSTCDN*YYSFFS
Trigger: GGAAAAGAAACTGTAGTATCAGTTGTCACAAGTAGA...CCAGTCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGTTATACCAATCCTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR TCA 90 bp GCTCTTTCAAGAATCACTCTTGCTATATGCAGAGTTATCAAAAGTCAAAGTCTGCACATCTGTGCTTTCTaGAGCCAAAGTCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: ALSRITLAICRVIKSQSLHICAF*SQSLVF
Trigger: AAAAACTAGACTTTGGCTTCAGAAAGCACAGATGTG...CAGACTTTGACTTTTGATAACTCTGCATATAGCAAGAGTGATTCTTGAAAGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp TGTTTTCTCTTTCTCTCAAAGGCCACTGACAAGAAAGCAGCTATGGTATATTTTTGGCAATATCAACAATaGTTTCTATGCGTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: CFLFLSKATDKKAAMVYFWQYQQ*FLCVKG
Trigger: GCCTTTCACGCATAGAAACCATTGTTGATATTGCCA...AAAATATACCATAGCTGCTTTCTTGTCAGTGGCCTTTGAGAGAAAGAGAAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CCA 90 bp TGTTTTCTCTTTCTCTCAAAGGCCACTGACAAGAAAGCAGCTATGGTATATTTTGGAATCAGGAAGGATTaGTATAACAAGGCACAAGAT +
Preference number: 4 (lower is better)
Translates to: CFLFLSKATDKKAAMVYFGIRKD*YNKAQD
Trigger: ATCTTGTGCCTTGTTATACCAATCCTTCCTGATTCC...AAAATATACCATAGCTGCTTTCTTGTCAGTGGCCTTTGAGAGAAAGAGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
3UTR CAA 72 bp GGAATCAGGAAGGATTGGTATAACAAGGCACAAGATTaGGAATTTACCCTTTACAGACTGGCTTTTATAACA +
Preference number: 4 (lower is better)
Translates to: GIRKDWYNKAQD*EFTLYRLAFIT
Trigger: TGTTATAAAAGCCAGTCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGTTATACCAATCCTTCCTGATTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp GGTTCCCTGGGCAAAGGGTCCAAGCACACCGGGGCAGGGCAGGTTGCTCTGGACTACCCTAGCTCCCCGTaGTCCTTCCACAGAAGGAAC +
Preference number: 5 (lower is better)
Translates to: GSLGKGSKHTGAGQVALDYPSSP*SFHRRN
Trigger: GTTCCTTCTGTGGAAGGACAACGGGGAGCTAGGGTA...GTCCAGAGCAACCTGCCCTGCCCCGGTGTGCTTGGACCCTTTGCCCAGGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp GGTTCCCTGGGCAAAGGGTCCAAGCACACCGGGGCAGGGCAGGTTGCTCTGGACGTCCTTCCCCAACAGTaGCATGAGTGTCAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: GSLGKGSKHTGAGQVALDVLPQQ*HECQKA
Trigger: TGCCTTTTGACACTCATGCAACTGTTGGGGAAGGAC...GTCCAGAGCAACCTGCCCTGCCCCGGTGTGCTTGGACCCTTTGCCCAGGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATCATAGTCCCAGCTACTaGGTGGCCGGGGAAGGGGTG +
Preference number: 5 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHHSPSY*VAGEGV
Trigger: CACCCCTTCCCCGGCCACCAAGTAGCTGGGACTATG...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp GGTTCCCTGGGCAAAGGGTCCAAGCACACCGGGGCAGGGCAGGTTGCTCTGGACCCAGGTATTTACCTGTaGTTGAATTGTGAGGTTGTG +
Preference number: 5 (lower is better)
Translates to: GSLGKGSKHTGAGQVALDPGIYL*LNCEVV
Trigger: CACAACCTCACAATTCAACAACAGGTAAATACCTGG...GTCCAGAGCAACCTGCCCTGCCCCGGTGTGCTTGGACCCTTTGCCCAGGGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp GGTTCCCTGGGCAAAGGGTCCAAGCACACCGGGGCAGGGCAGGTTGCTCTGGACTCTATCCTCCATTATTaGCCTTTGTCTGACTGTCTA +
Preference number: 5 (lower is better)
Translates to: GSLGKGSKHTGAGQVALDSILHY*PLSDCL
Trigger: TAGACAGTCAGACAAAGGCAAATAATGGAGGATAGA...GTCCAGAGCAACCTGCCCTGCCCCGGTGTGCTTGGACCCTTTGCCCAGGGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATTGTACTTCCAGCTACTaGGGAGGCTTAGGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHCTSSY*GGLGGK
Trigger: CTTCCCACCTAAGCCTCCCAAGTAGCTGGAAGTACA...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATAGTCTTCAACCAAGTTaGGCTCAAGGGTGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHSLQPS*AQGCVP
Trigger: GGGAACACACCCTTGAGCCAAACTTGGTTGAAGACT...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp TCTGGGGAGAATTCAAGGATCCCAGTCCAGTCCTTCCCCAACAGTTGCATGAGTATACCTCAGATGCTGTaGGCCTTGGCAGTGAGAAGA +
Preference number: 5 (lower is better)
Translates to: SGENSRIPVQSFPNSCMSIPQML*ALAVRR
Trigger: TCTTCTCACTGCCAAGGCCAACAGCATCTGAGGTAT...ACTCATGCAACTGTTGGGGAAGGACTGGACTGGGATCCTTGAATTCTCCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp GTGAGGCAGAGGAGAGGGGAGTGGCAATATCAACAATGGTTTCTATGCGTGAAATTAAGAGCCCAACCCTaGGCTGTGAGCTGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: VRQRRGEWQYQQWFLCVKLRAQP*AVSWKA
Trigger: AGCCTTCCAGCTCACAGCCAAGGGTTGGGCTCTTAA...TTTCACGCATAGAAACCATTGTTGATATTGCCACTCCCCTCTCCTCTGCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp GTGAGGCAGAGGAGAGGGGAGTGGCAATATCAACAATGGTTTCTATGCGTGAAATTTGGAGGTCAGGAGTaGGACACTAGCCTGGCCAAC +
Preference number: 5 (lower is better)
Translates to: VRQRRGEWQYQQWFLCVKFGGQE*DTSLAN
Trigger: GTTGGCCAGGCTAGTGTCCAACTCCTGACCTCCAAA...TTTCACGCATAGAAACCATTGTTGATATTGCCACTCCCCTCTCCTCTGCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp TTTTCTAGCCCCCACCTTCCCAACCCTCAGAGAAGGACAGTAAAGAAATCAGTGAGGCAGGAGAACTGCTaGAACCCAGGAGATGGAGGT +
Preference number: 5 (lower is better)
Translates to: FSSPHLPNPQRRTVKKSVRQENC*NPGDGG
Trigger: ACCTCCATCTCCTGGGTTCAAGCAGTTCTCCTGCCT...CACTGATTTCTTTACTGTCCTTCTCTGAGGGTTGGGAAGGTGGGGGCTAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp TACTCCCAAAAAGCTATACCTCAGATGCTGTTGGCCTTGGCAGTGAGAAGAGTTGAGAGGCACCTGGCCTaGAAGTGCAAGGGAGTCAAA +
Preference number: 5 (lower is better)
Translates to: YSQKAIPQMLLALAVRRVERHLA*KCKGVK
Trigger: TTTGACTCCCTTGCACTTCAAGGCCAGGTGCCTCTC...AACTCTTCTCACTGCCAAGGCCAACAGCATCTGAGGTATAGCTTTTTGGGAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTAGGTGGGAGGCTCACTaGACAGGAGTTCAAGACCAG +
Preference number: 5 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVRWEAH*TGVQDQ
Trigger: CTGGTCTTGAACTCCTGTCAAGTGAGCCTCCCACCT...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp AATTTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAAGCGCAATGCTGCCACTaGCCCAGAAGGTGGGGCATG +
Preference number: 5 (lower is better)
Translates to: NFRNLLMRGRIENVGSTEAQCCH*PRRWGM
Trigger: CATGCCCCACCTTCTGGGCAAGTGGCAGCATTGCGC...TTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATTATGGTATATTTTCCTaGACTGAGGGCTGGAGACTC +
Preference number: 5 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHYGIFS*TEGWRL
Trigger: GAGTCTCCAGCCCTCAGTCAAGGAAAATATACCATA...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp CATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGAGCCTAGGGGCAAGTTaGGGCCAGATCACCCACCCA +
Preference number: 5 (lower is better)
Translates to: HRKLFHIDEKLRPPCLFKSLGAS*GQITHP
Trigger: TGGGTGGGTGATCTGGCCCAAACTTGCCCCTAGGCT...CTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp TTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGGTCGAGATCACGCCATaGCACTCCAGCCTTTGCCAT +
Preference number: 5 (lower is better)
Translates to: FHIDEKLRPPCLFKVGEKVEITP*HSSLCH
Trigger: ATGGCAAAGGCTGGAGTGCAATGGCGTGATCTCGAC...CTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542360.1
CDS-3UTR CAA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTCAGATGCTGTTGGCCTaGGCAGTGAGAAGAGTTGAT +
Preference number: 5 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVQMLLA*AVRRVD
Trigger: ATCAACTCTTCTCACTGCCAAGGCCAACAGCATCTG...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp ATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACGTTAGAAGGTTGCTGGGCTaGGGGCTATTTTACACTGGA +
Preference number: 5 (lower is better)
Translates to: IDEKLRPPCLFKVGEKYVRRLLG*GLFYTG
Trigger: TCCAGTGTAAAATAGCCCCAAGCCCAGCAACCTTCT...AACGTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp TACTCCCAAAAAGCTATACCTCAGATGCTGTTGGCCTTGGCAGTGAGAAGAGTTCCCAGTTTATTGCCCTaGGCTAAGAATGCAAAGCCC +
Preference number: 5 (lower is better)
Translates to: YSQKAIPQMLLALAVRRVPSLLP*AKNAKP
Trigger: GGGCTTTGCATTCTTAGCCAAGGGCAATAAACTGGG...AACTCTTCTCACTGCCAAGGCCAACAGCATCTGAGGTATAGCTTTTTGGGAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACAAATGTCTGGCTGAGTaGCTGGAGCAAAGGGGGATT +
Preference number: 5 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYKCLAE*LEQRGI
Trigger: AATCCCCCTTTGCTCCAGCAACTCAGCCAGACATTT...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp CCACTGCTACTAGGGATTCCTAGGACATTCCAGCAAGGCCTCTCACAGCATCATAAGAGTTGGAATTTATaGCTCTTTGCTACCCTAGCT +
Preference number: 5 (lower is better)
Translates to: PLLLGIPRTFQQGLSQHHKSWNL*LFATLA
Trigger: AGCTAGGGTAGCAAAGAGCAATAAATTCCAACTCTT...ATGATGCTGTGAGAGGCCTTGCTGGAATGTCCTAGGAATCCCTAGTAGCAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp TTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGCCTGGAAACTTTGTCTaGGTGCAACCCCCTAAACTG +
Preference number: 5 (lower is better)
Translates to: FHIDEKLRPPCLFKVGEKPGNFV*VQPPKL
Trigger: CAGTTTAGGGGGTTGCACCAAGACAAAGTTTCCAGG...CTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp CCAATACATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCATTGCACTCCAGCCTTaGCCATCTGTGCCTGTACAC +
Preference number: 5 (lower is better)
Translates to: PIHRKLFHIDEKLRPPCLIALQP*PSVPVH
Trigger: GTGTACAGGCACAGATGGCAAAGGCTGGAGTGCAAT...GAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATGTATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542360.1
CDS-3UTR CAA 90 bp CATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGTAGGGGAAAAGTACAAGCCCTTCCTGAGTTaGGAAGCATCAATTAGAAGA +
Preference number: 5 (lower is better)
Translates to: HIDEKLRPPCLFKVGEKYKPFLS*EASIRR
Trigger: TCTTCTAATTGATGCTTCCAAACTCAGGAAGGGCTT...GTACTTTTCCCCTACCTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp TACTCCCAAAAAGCTATACCTCAGATGCTGTTGGCCTTGGCAGTGAGAAGAGTTGGAAATTTCAGGAATTaGCTAATGCGTGGGAGGATT +
Preference number: 5 (lower is better)
Translates to: YSQKAIPQMLLALAVRRVGNFRN*LMRGRI
Trigger: AATCCTCCCACGCATTAGCAAATTCCTGAAATTTCC...AACTCTTCTCACTGCCAAGGCCAACAGCATCTGAGGTATAGCTTTTTGGGAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp GCAGAGTTATCAAAAGTCAAAGTCTGGGGAGAATTCAAGGATCCCAGTCCAGTCAGTTTGGGGATCTGCTaGGAGAATGAAGGTTTATTC +
Preference number: 5 (lower is better)
Translates to: AELSKVKVWGEFKDPSPVSLGIC*ENEGLF
Trigger: GAATAAACCTTCATTCTCCAAGCAGATCCCCAAACT...GACTGGACTGGGATCCTTGAATTCTCCCCAGACTTTGACTTTTGATAACTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS GCA 90 bp ACGTACTGTAGCTCTCAAGCTTTCCACCTAAGCTCACAGAAATCATaGCATGATCATTTCCGTTCCACTTTAATGTCGTTAGTACTCCTG +
Preference number: 5 (lower is better)
Translates to: TYCSSQAFHLSSQKS*HDHFRSTLMSLVLL
Trigger: CAGGAGTACTAACGACATTAAAGTGGAACGGAAATGATCATGGCATGATTTCTGTGAGCTTAGGTGGAAAGCTTGAGAGCTACAGTACGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552228.1
CDS-3UTR CAA 90 bp GTGAGGCAGAGGAGAGGGGAGTGGCAATATCAACAATGGTTTCTATGCGTGAAAAACAAGGCACAAGATTaGGAATTTACCCTTTACAGA +
Preference number: 5 (lower is better)
Translates to: VRQRRGEWQYQQWFLCVKNKAQD*EFTLYR
Trigger: TCTGTAAAGGGTAAATTCCAAATCTTGTGCCTTGTT...TTTCACGCATAGAAACCATTGTTGATATTGCCACTCCCCTCTCCTCTGCCTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp TGTTTTCTCTTTCTCTCAAAGGCCACTGACAAGAAAGCAGCTATGGTATATTTTTCCAGCCTGGAAACTTaGTCTTGGTGCAACCCCCTA +
Preference number: 5 (lower is better)
Translates to: CFLFLSKATDKKAAMVYFSSLET*SWCNPL
Trigger: TAGGGGGTTGCACCAAGACAAAGTTTCCAGGCTGGA...AAAATATACCATAGCTGCTTTCTTGTCAGTGGCCTTTGAGAGAAAGAGAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp AATTTCAGGAATTTGCTAATGCGTGGGAGGATTGAAAATGTAGGCAGCACAGAACAAAAAGGGTATATGTaGGAGTGGGGACTTCACTCG +
Preference number: 5 (lower is better)
Translates to: NFRNLLMRGRIENVGSTEQKGYM*EWGLHS
Trigger: CGAGTGAAGTCCCCACTCCAACATATACCCTTTTTG...TTCTGTGCTGCCTACATTTTCAATCCTCCCACGCATTAGCAAATTCCTGAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp CCATCAACCCAACCAATTAGACTATTTCATGGGAGAAACAGTATCCCTCCTTTCACAAAAATTAGCTGTTaGGAGGTCAGGAGTTGGACA +
Preference number: 5 (lower is better)
Translates to: PSTQPIRLFHGRNSIPPFTKISC*EVRSWT
Trigger: TGTCCAACTCCTGACCTCCAAACAGCTAATTTTTGT...GAAAGGAGGGATACTGTTTCTCCCATGAAATAGTCTAATTGGTTGGGTTGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp CATCGAAAACTTTTTCATATAGATGAGAAGCTGCGACCACCATGTCTCTTCAAGGGTATTTACCTGTTGTaGAATTGTGAGGTTGTGAGG +
Preference number: 5 (lower is better)
Translates to: HRKLFHIDEKLRPPCLFKGIYLL*NCEVVR
Trigger: CCTCACAACCTCACAATTCAACAACAGGTAAATACC...CTTGAAGAGACATGGTGGTCGCAGCTTCTCATCTATATGAAAAAGTTTTCGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp TGTTTTCTCTTTCTCTCAAAGGCCACTGACAAGAAAGCAGCTATGGTATATTTTCTCCCTCTTTGGTGTTaGGTTACCTTCACAGCTATA +
Preference number: 5 (lower is better)
Translates to: CFLFLSKATDKKAAMVYFLPLWC*VTFTAI
Trigger: TATAGCTGTGAAGGTAACCAAACACCAAAGAGGGAG...AAAATATACCATAGCTGCTTTCTTGTCAGTGGCCTTTGAGAGAAAGAGAAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10
CDS-3UTR CAA 90 bp TGTTTTCTCTTTCTCTCAAAGGCCACTGACAAGAAAGCAGCTATGGTATATTTTGAAGACTGCGGCAATTaGTCCTTTACGCTTTATATC +
Preference number: 5 (lower is better)
Translates to: CFLFLSKATDKKAAMVYFEDCGN*SFTLYI
Trigger: GATATAAAGCGTAAAGGACAAATTGCCGCAGTCTTC...AAAATATACCATAGCTGCTTTCTTGTCAGTGGCCTTTGAGAGAAAGAGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262031.10