Pregenerated sensors for RBM8A (Homo sapiens)
Ensembl gene IDs: ENSG00000265241Ensembl transcript IDs: ENST00000498663.5, ENST00000583313.7, ENST00000632040.1, ENST00000634130.1, ENST00000634161.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATACTGGGCGGCCCAGATCTTCGTTCCCTGCAGAACCTTGACAGTTaGACAAGTGACCTCCTCCAGAACAGATGGAGAGTCTCCAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: ILGGPDLRSLQNLDS*TSDLLQNRWRVSRS Trigger: GCTTCTGGAGACTCTCCATCTGTTCTGGAGGAGGTCACTTGTTCAACTGTCAAGGTTCTGCAGGGAACGAAGATCTGGGCCGCCCAGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000632040.1 |
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| 3UTR TCA 90 bp | ATGCAATGGGAAATGAATTTCATCCTTTCTTACAGCCTGACAATCTaGCAATATTTGCAACCTCTATTTGTTTCAATGGCAAACTGGTTG | + |
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Preference number: 1 (lower is better) Translates to: MQWEMNFILSYSLTI*QYLQPLFVSMANWL Trigger: CAACCAGTTTGCCATTGAAACAAATAGAGGTTGCAAATATTGTCAGATTGTCAGGCTGTAAGAAAGGATGAAATTCATTTCCCATTGCAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| 3UTR TCA 90 bp | ATGTCTGCTAAAATCACTTTCCCAAATGCCTTGTATCTAGGAATCTaGTGCCTACTGAGCTTACCTTTTATCAAATTAATAGTGACTCAA | + |
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Preference number: 1 (lower is better) Translates to: MSAKITFPNALYLGI*CLLSLPFIKLIVTQ Trigger: TTGAGTCACTATTAATTTGATAAAAGGTAAGCTCAGTAGGCATCAGATTCCTAGATACAAGGCATTTGGGAAAGTGATTTTAGCAGACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| 3UTR-3UTR GCA 90 bp | CACTGCACTCCGGCGTGGGCGGCAGAGCCAGACTCTGTTGGGGGTGGGGTGGGGAGCCTGTTGCTACAGTaGCATTTACAATTAGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: HCTPAWAAEPDSVGGGVGSLLLQ*HLQLGL Trigger: CAAACCTAATTGTAAATGGCACTGTAGCAACAGGCT...CCCCACCCCACCCCCAACAGAGTCTGGCTCTGCCGCCCACGCCGGAGTGCAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| 3UTR-3UTR GCA 90 bp | CACTGCACTCCGGCGTGGGCGGCAGAGCCAGACTCTGTTGGGGGTGGGGTGGGGAATCACTTTCCCAAATaGCTTGTATCTAGGAATCTG | + |
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Preference number: 2 (lower is better) Translates to: HCTPAWAAEPDSVGGGVGNHFPK*LVSRNL Trigger: CAGATTCCTAGATACAAGGCATTTGGGAAAGTGATT...CCCCACCCCACCCCCAACAGAGTCTGGCTCTGCCGCCCACGCCGGAGTGCAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| 3UTR CAA 90 bp | GAGCAAGCATACTGGGCGGCCCAGATCTTCGTTCCCTGCAGAACCTaGACAGTTGAACAAGTGACCTCCTCCAGAACAGATGGAGAGTCT | + |
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Preference number: 2 (lower is better) Translates to: EQAYWAAQIFVPCRT*TVEQVTSSRTDGES Trigger: AGACTCTCCATCTGTTCTGGAGGAGGTCACTTGTTCAACTGTCAAGGTTCTGCAGGGAACGAAGATCTGGGCCGCCCAGTATGCTTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000632040.1 |
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| 3UTR-3UTR TCA 90 bp | CACCGCGCCCAGCCAGCTTTGACTATTTTTATACTCCTCACAATTCTCAAGCACTGGGAGGAGACAGTATaGCATAGGTGGGTAGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: HRAQPALTIFILLTILKHWEETV*HRWVGW Trigger: CCAACCTACCCACCTATGTCATACTGTCTCCTCCCA...GTGCTTGAGAATTGTGAGGAGTATAAAAATAGTCAAAGCTGGCTGGGCGCGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| 3UTR-3UTR CCA 90 bp | CACCGCGCCCAGCCAGCTTTGACTATTTTTATACTCCTCACAATTCTCAAGCACAGCTGCAATCCACCCTaGGTAACACAGCAAGACTCT | + |
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Preference number: 2 (lower is better) Translates to: HRAQPALTIFILLTILKHSCNPP*VTQQDS Trigger: AGAGTCTTGCTGTGTTACCCAGGGTGGATTGCAGCT...GTGCTTGAGAATTGTGAGGAGTATAAAAATAGTCAAAGCTGGCTGGGCGCGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| 3UTR-3UTR TCA 90 bp | AACAAGACCTTTACCAATCCAAGTGTTAAAAAGAAGCCTGTTGCTACAGTGCCAAGCTGCAGTGAGCTATaGTCAGCTGCAATCCACCCT | + |
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Preference number: 2 (lower is better) Translates to: NKTFTNPSVKKKPVATVPSCSEL*SAAIHP Trigger: AGGGTGGATTGCAGCTGATCATAGCTCACTGCAGCT...TGGCACTGTAGCAACAGGCTTCTTTTTAACACTTGGATTGGTAAAGGTCTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| 3UTR-3UTR TCA 90 bp | AACAAGACCTTTACCAATCCAAGTGTTAAAAAGAAGCCTGTTGCTACAGTGCCAGCGCCCAGCCAGCTTTaGCTATTTTTATACTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: NKTFTNPSVKKKPVATVPAPSQL*LFLYSS Trigger: TGAGGAGTATAAAAATAGTCAAAGCTGGCTGGGCGC...TGGCACTGTAGCAACAGGCTTCTTTTTAACACTTGGATTGGTAAAGGTCTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| 3UTR-3UTR CCA 90 bp | TTGCAAACAAGACCTTTACCAATCCAAGTGTTAAAAAGAAGCCTGTTGCTACAGCTCAATCTCCATTACTaGAAAGCAGGCACTTTAACC | + |
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Preference number: 2 (lower is better) Translates to: LQTRPLPIQVLKRSLLLQLNLHY*KAGTLT Trigger: GGTTAAAGTGCCTGCTTTCCAGTAATGGAGATTGAG...CTGTAGCAACAGGCTTCTTTTTAACACTTGGATTGGTAAAGGTCTTGTTTGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| 3UTR-3UTR TCA 90 bp | CTGATCGTAACTCCAAACAGTTCACAAAATTCTCTTAGGCTGAAACTATTCATCTTGTATCTAGGAATCTaGTGCCTACTGAGCTTACCT | + |
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Preference number: 2 (lower is better) Translates to: LIVTPNSSQNSLRLKLFILYLGI*CLLSLP Trigger: AGGTAAGCTCAGTAGGCATCAGATTCCTAGATACAA...GATGAATAGTTTCAGCCTAAGAGAATTTTGTGAACTGTTTGGAGTTACGATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| 3UTR-3UTR CCA 90 bp | AACAAGACCTTTACCAATCCAAGTGTTAAAAAGAAGCCTGTTGCTACAGTGCCACTCTATTTGTTTCAATaGCAAACTGGTTGTGACATG | + |
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Preference number: 2 (lower is better) Translates to: NKTFTNPSVKKKPVATVPLYLFQ*QTGCDM Trigger: CATGTCACAACCAGTTTGCCATTGAAACAAATAGAG...TGGCACTGTAGCAACAGGCTTCTTTTTAACACTTGGATTGGTAAAGGTCTTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| 3UTR-3UTR TCA 90 bp | TTGCAAACAAGACCTTTACCAATCCAAGTGTTAAAAAGAAGCCTGTTGCTACAGGAATCTGATGCCTACTaGGCTTACCTTTTATCAAAT | + |
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Preference number: 2 (lower is better) Translates to: LQTRPLPIQVLKRSLLLQESDAY*AYLLSN Trigger: ATTTGATAAAAGGTAAGCTCAGTAGGCATCAGATTC...CTGTAGCAACAGGCTTCTTTTTAACACTTGGATTGGTAAAGGTCTTGTTTGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| 3UTR-3UTR CAA 90 bp | CACTGCACTCCGGCGTGGGCGGCAGAGCCAGACTCTGTTGGGGGTGGGGTGGGGCTTATTTTTGTAGGCTaGTTTCCAAGTTATCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: HCTPAWAAEPDSVGGGVGLIFVG*FPSYQQ Trigger: CTGCTGATAACTTGGAAACAAGCCTACAAAAATAAG...CCCCACCCCACCCCCAACAGAGTCTGGCTCTGCCGCCCACGCCGGAGTGCAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| 3UTR-3UTR CAA 90 bp | CACTGCACTCCGGCGTGGGCGGCAGAGCCAGACTCTGTTGGGGGTGGGGTGGGGATTTGCAACCTCTATTaGTTTCAATGGCAAACTGGT | + |
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Preference number: 3 (lower is better) Translates to: HCTPAWAAEPDSVGGGVGICNLY*FQWQTG Trigger: ACCAGTTTGCCATTGAAACAAATAGAGGTTGCAAAT...CCCCACCCCACCCCCAACAGAGTCTGGCTCTGCCGCCCACGCCGGAGTGCAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| 3UTR-3UTR CAA 90 bp | CACTGCACTCCGGCGTGGGCGGCAGAGCCAGACTCTGTTGGGGGTGGGGTGGGGTTAAAAAGAAGCCTGTaGCTACAGTGCCATTTACAA | + |
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Preference number: 3 (lower is better) Translates to: HCTPAWAAEPDSVGGGVGLKRSL*LQCHLQ Trigger: TTGTAAATGGCACTGTAGCAACAGGCTTCTTTTTAA...CCCCACCCCACCCCCAACAGAGTCTGGCTCTGCCGCCCACGCCGGAGTGCAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| 3UTR GCA 72 bp | GAGCAAGCATACTGGGCGGCCCAGATCTTCGTTCCCTaGAGAACCTTGACAGTTGAACAAGTGACCTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: EQAYWAAQIFVP*RTLTVEQVTSS Trigger: GGAGGAGGTCACTTGTTCAACTGTCAAGGTTCTGCAGGGAACGAAGATCTGGGCCGCCCAGTATGCTTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000632040.1 |
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| 3UTR TCA 72 bp | GAAGGATGGCTTGAGCCCAAGAGTTTGAAGCTGCAGTaGGCTATGATCAGCTGCAATCCACCCTGGGTAACA | + |
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Preference number: 3 (lower is better) Translates to: EGWLEPKSLKLQ*AMISCNPPWVT Trigger: TGTTACCCAGGGTGGATTGCAGCTGATCATAGCTCACTGCAGCTTCAAACTCTTGGGCTCAAGCCATCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| 3UTR TCA 72 bp | GAAATGAATTTCATCCTTTCTTACAGCCTGACAATCTaGCAATATTTGCAACCTCTATTTGTTTCAATGGCA | + |
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Preference number: 3 (lower is better) Translates to: EMNFILSYSLTI*QYLQPLFVSMA Trigger: TGCCATTGAAACAAATAGAGGTTGCAAATATTGTCAGATTGTCAGGCTGTAAGAAAGGATGAAATTCATTTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR CCA 90 bp | CACTGCACTCCGGCGTGGGCGGCAGAGCCAGACTCTGTTGGGGGTGGGGTGGGGGCAAGCTCCGCCTCCTaGGTTCAGGTCATTCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: HCTPAWAAEPDSVGGGVGASSAS*VQVILL Trigger: CAGGAGAATGACCTGAACCCAGGAGGCGGAGCTTGC...CCCCACCCCACCCCCAACAGAGTCTGGCTCTGCCGCCCACGCCGGAGTGCAGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR CCA 90 bp | CACTGCACTCCGGCGTGGGCGGCAGAGCCAGACTCTGTTGGGGGTGGGGTGGGGGAGTTCCCAAGTAGCTaGGACTACAGGCACCTACCA | + |
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Preference number: 4 (lower is better) Translates to: HCTPAWAAEPDSVGGGVGEFPSS*DYRHLP Trigger: TGGTAGGTGCCTGTAGTCCCAGCTACTTGGGAACTC...CCCCACCCCACCCCCAACAGAGTCTGGCTCTGCCGCCCACGCCGGAGTGCAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR CCA 90 bp | CACTGCACTCCGGCGTGGGCGGCAGAGCCAGACTCTGTTGGGGGTGGGGTGGGGAGCTGCAATCCACCCTaGGTAACACAGCAAGACTCT | + |
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Preference number: 4 (lower is better) Translates to: HCTPAWAAEPDSVGGGVGSCNPP*VTQQDS Trigger: AGAGTCTTGCTGTGTTACCCAGGGTGGATTGCAGCT...CCCCACCCCACCCCCAACAGAGTCTGGCTCTGCCGCCCACGCCGGAGTGCAGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR GCA 90 bp | CACTGCACTCCGGCGTGGGCGGCAGAGCCAGACTCTGTTGGGGGTGGGGTGGGGCTTTCAGTTTGTGAATaGTCTCGTCCCCATCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: HCTPAWAAEPDSVGGGVGLSVCE*SRPHPH Trigger: ATGAGGATGGGGACGAGAGCATTCACAAACTGAAAG...CCCCACCCCACCCCCAACAGAGTCTGGCTCTGCCGCCCACGCCGGAGTGCAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR TCA 90 bp | CACTGCACTCCGGCGTGGGCGGCAGAGCCAGACTCTGTTGGGGGTGGGGTGGGGGAATCTGATGCCTACTaGGCTTACCTTTTATCAAAT | + |
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Preference number: 4 (lower is better) Translates to: HCTPAWAAEPDSVGGGVGESDAY*AYLLSN Trigger: ATTTGATAAAAGGTAAGCTCAGTAGGCATCAGATTC...CCCCACCCCACCCCCAACAGAGTCTGGCTCTGCCGCCCACGCCGGAGTGCAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR GCA 90 bp | CACCGCGCCCAGCCAGCTTTGACTATTTTTATACTCCTCACAATTCTCAAGCACGCAGTGAGCCAAGACTaGACCACTGCACTCCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: HRAQPALTIFILLTILKHAVSQD*TTALRR Trigger: ACGCCGGAGTGCAGTGGTGCAGTCTTGGCTCACTGC...GTGCTTGAGAATTGTGAGGAGTATAAAAATAGTCAAAGCTGGCTGGGCGCGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR GCA 90 bp | CCCAAATGCCTTGTATCTAGGAATCTGATGCCTACTGAGCTTACCTTTTATCAACCAAGACTGCACCACTaGACTCCGGCGTGGGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: PKCLVSRNLMPTELTFYQPRLHH*TPAWAA Trigger: TGCCGCCCACGCCGGAGTGCAGTGGTGCAGTCTTGG...TTGATAAAAGGTAAGCTCAGTAGGCATCAGATTCCTAGATACAAGGCATTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR CCA 90 bp | CACCGCGCCCAGCCAGCTTTGACTATTTTTATACTCCTCACAATTCTCAAGCACTCACTATCATGGGGTTaGGGGGCAGGATACAACAGC | + |
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Preference number: 4 (lower is better) Translates to: HRAQPALTIFILLTILKHSLSWG*GAGYNS Trigger: GCTGTTGTATCCTGCCCCCCAACCCCATGATAGTGA...GTGCTTGAGAATTGTGAGGAGTATAAAAATAGTCAAAGCTGGCTGGGCGCGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR CCA 90 bp | TGCAGAACCTTGACAGTTGAACAAGTGACCTCCTCCAGAACAGATGGAGAGTCTAGAGAGCAAGCATACTaGGCGGCCCAGATCTTCGTT | + |
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Preference number: 4 (lower is better) Translates to: CRTLTVEQVTSSRTDGESREQAY*AAQIFV Trigger: AACGAAGATCTGGGCCGCCCAGTATGCTTGCTCTCT...AGACTCTCCATCTGTTCTGGAGGAGGTCACTTGTTCAACTGTCAAGGTTCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000632040.1 |
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| CDS-3UTR TCA 90 bp | ACCTTGACAGTTGAACAAGTGACCTCCTCCAGAACAGATGGAGAGTCTCCAGAACAGAACCTTGACAGTTaGACAAGTGACCTCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TLTVEQVTSSRTDGESPEQNLDS*TSDLLQ Trigger: CTGGAGGAGGTCACTTGTTCAACTGTCAAGGTTCTG...TTCTGGAGACTCTCCATCTGTTCTGGAGGAGGTCACTTGTTCAACTGTCAAGGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000632040.1 |
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| CDS-3UTR CCA 90 bp | TGCAGAACCTTGACAGTTGAACAAGTGACCTCCTCCAGAACAGATGGAGAGTCTCTCCTCCAGAACAGATaGAGAGTCTCCAGAAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: CRTLTVEQVTSSRTDGESLLQNR*RVSRSR Trigger: TCTGCTTCTGGAGACTCTCCATCTGTTCTGGAGGAG...AGACTCTCCATCTGTTCTGGAGGAGGTCACTTGTTCAACTGTCAAGGTTCTGCA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000632040.1 |
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| CDS-3UTR TCA 90 bp | CACCGCGCCCAGCCAGCTTTGACTATTTTTATACTCCTCACAATTCTCAAGCACGCGCCCAGCCAGCTTTaGCTATTTTTATACTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: HRAQPALTIFILLTILKHAPSQL*LFLYSS Trigger: TGAGGAGTATAAAAATAGTCAAAGCTGGCTGGGCGC...GTGCTTGAGAATTGTGAGGAGTATAAAAATAGTCAAAGCTGGCTGGGCGCGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR GCA 90 bp | CCCAAATGCCTTGTATCTAGGAATCTGATGCCTACTGAGCTTACCTTTTATCAATCGCCCAGGCTGGAGTaGAATGGCGCAATCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PKCLVSRNLMPTELTFYQSPRLE*NGAISA Trigger: AGCAGAGATTGCGCCATTGCACTCCAGCCTGGGCGA...TTGATAAAAGGTAAGCTCAGTAGGCATCAGATTCCTAGATACAAGGCATTTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR GCA 90 bp | ACAGTTGAACAAGTGACCTCCTCCAGAACAGATGGAGAGTCTCCAGAAGCAGAGCAGATCTTCGTTCCCTaGAGAACCTTGACAGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: TVEQVTSSRTDGESPEAEQIFVP*RTLTVE Trigger: TTCAACTGTCAAGGTTCTGCAGGGAACGAAGATCTG...CTCTGCTTCTGGAGACTCTCCATCTGTTCTGGAGGAGGTCACTTGTTCAACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000632040.1 |
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| CDS-3UTR CCA 90 bp | GAAGCAGAGGCTTTAGTGAACGAAATTCGCAATAATCAGCTCCAGATCCTGGACATCAGCTCCAGATCCTaGACAACAGAGGACCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: EAEALVNEIRNNQLQILDISSRS*TTEDLS Trigger: TGACAGGTCCTCTGTTGTCCAGGATCTGGAGCTGAT...GTCCAGGATCTGGAGCTGATTATTGCGAATTTCGTTCACTAAAGCCTCTGCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000632040.1 |
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| CDS-3UTR TCA 90 bp | CTGATCGTAACTCCAAACAGTTCACAAAATTCTCTTAGGCTGAAACTATTCATCAAGTGGAGGCTGCAGTaGGCCAAGACTGCACCACTG | + |
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Preference number: 4 (lower is better) Translates to: LIVTPNSSQNSLRLKLFIKWRLQ*AKTAPL Trigger: CAGTGGTGCAGTCTTGGCTCACTGCAGCCTCCACTT...GATGAATAGTTTCAGCCTAAGAGAATTTTGTGAACTGTTTGGAGTTACGATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR GCA 90 bp | CTGATCGTAACTCCAAACAGTTCACAAAATTCTCTTAGGCTGAAACTATTCATCCTGGGAAGTGGAGGCTaGAGTGAGCCAAGACTGCAC | + |
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Preference number: 4 (lower is better) Translates to: LIVTPNSSQNSLRLKLFILGSGG*SEPRLH Trigger: GTGCAGTCTTGGCTCACTGCAGCCTCCACTTCCCAG...GATGAATAGTTTCAGCCTAAGAGAATTTTGTGAACTGTTTGGAGTTACGATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR CCA 90 bp | CACCGCGCCCAGCCAGCTTTGACTATTTTTATACTCCTCACAATTCTCAAGCACCTCAATCTCCATTACTaGAAAGCAGGCACTTTAACC | + |
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Preference number: 4 (lower is better) Translates to: HRAQPALTIFILLTILKHLNLHY*KAGTLT Trigger: GGTTAAAGTGCCTGCTTTCCAGTAATGGAGATTGAG...GTGCTTGAGAATTGTGAGGAGTATAAAAATAGTCAAAGCTGGCTGGGCGCGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR TCA 90 bp | TTGCAAACAAGACCTTTACCAATCCAAGTGTTAAAAAGAAGCCTGTTGCTACAGAGCTGCAGTGAGCTATaGTCAGCTGCAATCCACCCT | + |
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Preference number: 4 (lower is better) Translates to: LQTRPLPIQVLKRSLLLQSCSEL*SAAIHP Trigger: AGGGTGGATTGCAGCTGATCATAGCTCACTGCAGCT...CTGTAGCAACAGGCTTCTTTTTAACACTTGGATTGGTAAAGGTCTTGTTTGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR TCA 90 bp | TTGCAAACAAGACCTTTACCAATCCAAGTGTTAAAAAGAAGCCTGTTGCTACAGTGGGAGGAGACAGTATaGCATAGGTGGGTAGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LQTRPLPIQVLKRSLLLQWEETV*HRWVGW Trigger: CCAACCTACCCACCTATGTCATACTGTCTCCTCCCA...CTGTAGCAACAGGCTTCTTTTTAACACTTGGATTGGTAAAGGTCTTGTTTGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR TCA 90 bp | CACCGCGCCCAGCCAGCTTTGACTATTTTTATACTCCTCACAATTCTCAAGCACCAAGTTATCAGCAGTTaGAAGGGATGTTTCTACAGT | + |
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Preference number: 4 (lower is better) Translates to: HRAQPALTIFILLTILKHQVISS*KGCFYS Trigger: ACTGTAGAAACATCCCTTTCAACTGCTGATAACTTG...GTGCTTGAGAATTGTGAGGAGTATAAAAATAGTCAAAGCTGGCTGGGCGCGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR TCA 90 bp | CTGATCGTAACTCCAAACAGTTCACAAAATTCTCTTAGGCTGAAACTATTCATCGGCACGAGAATTGCTTaGACCTGGGAAGTGGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: LIVTPNSSQNSLRLKLFIGTRIA*TWEVEA Trigger: AGCCTCCACTTCCCAGGTTCAAGCAATTCTCGTGCC...GATGAATAGTTTCAGCCTAAGAGAATTTTGTGAACTGTTTGGAGTTACGATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR CCA 90 bp | CACCGCGCCCAGCCAGCTTTGACTATTTTTATACTCCTCACAATTCTCAAGCACCTCTATTTGTTTCAATaGCAAACTGGTTGTGACATG | + |
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Preference number: 4 (lower is better) Translates to: HRAQPALTIFILLTILKHLYLFQ*QTGCDM Trigger: CATGTCACAACCAGTTTGCCATTGAAACAAATAGAG...GTGCTTGAGAATTGTGAGGAGTATAAAAATAGTCAAAGCTGGCTGGGCGCGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR CCA 90 bp | CCCAAATGCCTTGTATCTAGGAATCTGATGCCTACTGAGCTTACCTTTTATCAAGAACAAAGAAAGGCCTaGTGGCTCAAGCCTGTAATC | + |
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Preference number: 4 (lower is better) Translates to: PKCLVSRNLMPTELTFYQEQRKA*WLKPVI Trigger: GATTACAGGCTTGAGCCACCAGGCCTTTCTTTGTTC...TTGATAAAAGGTAAGCTCAGTAGGCATCAGATTCCTAGATACAAGGCATTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR TCA 90 bp | TTGCAAACAAGACCTTTACCAATCCAAGTGTTAAAAAGAAGCCTGTTGCTACAGTTTTCTTTCAGTTTGTaGATGCTCTCGTCCCCATCC | + |
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Preference number: 4 (lower is better) Translates to: LQTRPLPIQVLKRSLLLQFSFSL*MLSSPS Trigger: GGATGGGGACGAGAGCATTCACAAACTGAAAGAAAA...CTGTAGCAACAGGCTTCTTTTTAACACTTGGATTGGTAAAGGTCTTGTTTGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR TCA 90 bp | AACAAGACCTTTACCAATCCAAGTGTTAAAAAGAAGCCTGTTGCTACAGTGCCAATGGCAAACTGGTTGTaGCATGATACATGTGCGAAA | + |
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Preference number: 4 (lower is better) Translates to: NKTFTNPSVKKKPVATVPMANWL*HDTCAK Trigger: TTTCGCACATGTATCATGTCACAACCAGTTTGCCAT...TGGCACTGTAGCAACAGGCTTCTTTTTAACACTTGGATTGGTAAAGGTCTTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR TCA 90 bp | TTGCAAACAAGACCTTTACCAATCCAAGTGTTAAAAAGAAGCCTGTTGCTACAGTTGTATCTAGGAATCTaGTGCCTACTGAGCTTACCT | + |
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Preference number: 4 (lower is better) Translates to: LQTRPLPIQVLKRSLLLQLYLGI*CLLSLP Trigger: AGGTAAGCTCAGTAGGCATCAGATTCCTAGATACAA...CTGTAGCAACAGGCTTCTTTTTAACACTTGGATTGGTAAAGGTCTTGTTTGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR TCA 90 bp | CCCAAATGCCTTGTATCTAGGAATCTGATGCCTACTGAGCTTACCTTTTATCAATCCTTTCTTACAGCCTaGCAATCTGACAATATTTGC | + |
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Preference number: 4 (lower is better) Translates to: PKCLVSRNLMPTELTFYQSFLTA*QSDNIC Trigger: GCAAATATTGTCAGATTGTCAGGCTGTAAGAAAGGA...TTGATAAAAGGTAAGCTCAGTAGGCATCAGATTCCTAGATACAAGGCATTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR TCA 90 bp | TTGCAAACAAGACCTTTACCAATCCAAGTGTTAAAAAGAAGCCTGTTGCTACAGTACAGCCTGACAATCTaGCAATATTTGCAACCTCTA | + |
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Preference number: 4 (lower is better) Translates to: LQTRPLPIQVLKRSLLLQYSLTI*QYLQPL Trigger: TAGAGGTTGCAAATATTGTCAGATTGTCAGGCTGTA...CTGTAGCAACAGGCTTCTTTTTAACACTTGGATTGGTAAAGGTCTTGTTTGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR GCA 90 bp | TTGCAAACAAGACCTTTACCAATCCAAGTGTTAAAAAGAAGCCTGTTGCTACAGAGCCTGTTGCTACAGTaGCATTTACAATTAGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: LQTRPLPIQVLKRSLLLQSLLLQ*HLQLGL Trigger: CAAACCTAATTGTAAATGGCACTGTAGCAACAGGCT...CTGTAGCAACAGGCTTCTTTTTAACACTTGGATTGGTAAAGGTCTTGTTTGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| 3UTR CAA 72 bp | CTTATTTTTGTAGGCTTGTTTCCAAGTTATCAGCAGTaGAAAGGGATGTTTCTACAGTACGTGGTAAATGGC | + |
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Preference number: 4 (lower is better) Translates to: LIFVGLFPSYQQ*KGMFLQYVVNG Trigger: GCCATTTACCACGTACTGTAGAAACATCCCTTTCAACTGCTGATAACTTGGAAACAAGCCTACAAAAATAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR GCA 90 bp | CTGATCGTAACTCCAAACAGTTCACAAAATTCTCTTAGGCTGAAACTATTCATCAATCACTTTCCCAAATaGCTTGTATCTAGGAATCTG | + |
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Preference number: 4 (lower is better) Translates to: LIVTPNSSQNSLRLKLFINHFPK*LVSRNL Trigger: CAGATTCCTAGATACAAGGCATTTGGGAAAGTGATT...GATGAATAGTTTCAGCCTAAGAGAATTTTGTGAACTGTTTGGAGTTACGATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| 3UTR CAA 72 bp | AGACCTTTACCAATCCAAGTGTTAAAAAGAAGCCTGTaGCTACAGTGCCATTTACAATTAGGTTTGTTTATA | + |
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Preference number: 4 (lower is better) Translates to: RPLPIQVLKRSL*LQCHLQLGLFI Trigger: TATAAACAAACCTAATTGTAAATGGCACTGTAGCAACAGGCTTCTTTTTAACACTTGGATTGGTAAAGGTCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR CAA 90 bp | GAGGCTTTAGTGAACGAAATTCGCAATAATCAGCTCCAGATCCTGGACAACAGAGTTCCCTGCAGAACCTaGACAGTTGAACAAGTGACC | + |
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Preference number: 5 (lower is better) Translates to: EALVNEIRNNQLQILDNRVPCRT*TVEQVT Trigger: GGTCACTTGTTCAACTGTCAAGGTTCTGCAGGGAAC...TCTGTTGTCCAGGATCTGGAGCTGATTATTGCGAATTTCGTTCACTAAAGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000632040.1 |
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| CDS-3UTR CAA 90 bp | AACAAGACCTTTACCAATCCAAGTGTTAAAAAGAAGCCTGTTGCTACAGTGCCATTTTGGCTAAGGCACTaGAAATCCATGGGCCACAAG | + |
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Preference number: 5 (lower is better) Translates to: NKTFTNPSVKKKPVATVPFWLRH*KSMGHK Trigger: CTTGTGGCCCATGGATTTCAAGTGCCTTAGCCAAAA...TGGCACTGTAGCAACAGGCTTCTTTTTAACACTTGGATTGGTAAAGGTCTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR CAA 90 bp | CTGATCGTAACTCCAAACAGTTCACAAAATTCTCTTAGGCTGAAACTATTCATCCGCGCCCAGCCAGCTTaGACTATTTTTATACTCCTC | + |
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Preference number: 5 (lower is better) Translates to: LIVTPNSSQNSLRLKLFIRAQPA*TIFILL Trigger: GAGGAGTATAAAAATAGTCAAAGCTGGCTGGGCGCG...GATGAATAGTTTCAGCCTAAGAGAATTTTGTGAACTGTTTGGAGTTACGATCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR CAA 90 bp | TTGCAAACAAGACCTTTACCAATCCAAGTGTTAAAAAGAAGCCTGTTGCTACAGCCAAGTTATCAGCAGTaGAAAGGGATGTTTCTACAG | + |
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Preference number: 5 (lower is better) Translates to: LQTRPLPIQVLKRSLLLQPSYQQ*KGMFLQ Trigger: CTGTAGAAACATCCCTTTCAACTGCTGATAACTTGG...CTGTAGCAACAGGCTTCTTTTTAACACTTGGATTGGTAAAGGTCTTGTTTGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR CAA 90 bp | AACAAGACCTTTACCAATCCAAGTGTTAAAAAGAAGCCTGTTGCTACAGTGCCACTTATTTTTGTAGGCTaGTTTCCAAGTTATCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: NKTFTNPSVKKKPVATVPLIFVG*FPSYQQ Trigger: CTGCTGATAACTTGGAAACAAGCCTACAAAAATAAG...TGGCACTGTAGCAACAGGCTTCTTTTTAACACTTGGATTGGTAAAGGTCTTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR CAA 90 bp | CTGATCGTAACTCCAAACAGTTCACAAAATTCTCTTAGGCTGAAACTATTCATCATTTGCAACCTCTATTaGTTTCAATGGCAAACTGGT | + |
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Preference number: 5 (lower is better) Translates to: LIVTPNSSQNSLRLKLFIICNLY*FQWQTG Trigger: ACCAGTTTGCCATTGAAACAAATAGAGGTTGCAAAT...GATGAATAGTTTCAGCCTAAGAGAATTTTGTGAACTGTTTGGAGTTACGATCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS-3UTR CAA 90 bp | CTGATCGTAACTCCAAACAGTTCACAAAATTCTCTTAGGCTGAAACTATTCATCTTAAAAAGAAGCCTGTaGCTACAGTGCCATTTACAA | + |
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Preference number: 5 (lower is better) Translates to: LIVTPNSSQNSLRLKLFILKRSL*LQCHLQ Trigger: TTGTAAATGGCACTGTAGCAACAGGCTTCTTTTTAA...GATGAATAGTTTCAGCCTAAGAGAATTTTGTGAACTGTTTGGAGTTACGATCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000583313.7 |
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| CDS CCA 72 bp | TCTCCAGTTGTCGAATCTGTTTCTGTAACTCAGGACTaGCTCCATGCCTCTGCAGCGCATGGCCAAGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: SPVVESVSVTQD*LHASAAHGQEE Trigger: CTCTTCTTGGCCATGCGCTGCAGAGGCATGGAGCCAGTCCTGAGTTACAGAAACAGATTCGACAACTGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634130.1 |
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| CDS CAA 90 bp | CAGACACTAGGTACCTCGGGAAACGGAAGTGTTTCTGTGGCCATCTaGAACAGATCGCAAGCTAAATCATCCATCTTAGGAGGTACAGAC | + |
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Preference number: 6 (lower is better) Translates to: QTLGTSGNGSVSVAI*NRSQAKSSILGGTD Trigger: GTCTGTACCTCCTAAGATGGATGATTTAGCTTGCGATCTGTTCAAGATGGCCACAGAAACACTTCCGTTTCCCGAGGTACCTAGTGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634161.1 |
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| CDS CAA 72 bp | GGTACCTCGGGAAACGGAAGTGTTTCTGTGGCCATCTaGAACAGATCGCAAGCTAAATCATCCATCTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: GTSGNGSVSVAI*NRSQAKSSILG Trigger: TCCTAAGATGGATGATTTAGCTTGCGATCTGTTCAAGATGGCCACAGAAACACTTCCGTTTCCCGAGGTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000634161.1 |
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| CDS CAA 90 bp | TTTAAGCTATCTCTGAACCCATTCCTACTGCGTTTAACTATTTTATaGGTTTCTAACTACTACCACAGACACGGATACCTCACAGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: FKLSLNPFLLRLTIL*VSNYYHRHGYLTGS Trigger: GGAACCTGTGAGGTATCCGTGTCTGTGGTAGTAGTTAGAAACCAATAAAATAGTTAAACGCAGTAGGAATGGGTTCAGAGATAGCTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498663.5 |
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| CDS CAA 72 bp | TCTCTGAACCCATTCCTACTGCGTTTAACTATTTTATaGGTTTCTAACTACTACCACAGACACGGATACCTC | + |
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Preference number: 6 (lower is better) Translates to: SLNPFLLRLTIL*VSNYYHRHGYL Trigger: GAGGTATCCGTGTCTGTGGTAGTAGTTAGAAACCAATAAAATAGTTAAACGCAGTAGGAATGGGTTCAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498663.5 |
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