RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBM6 (Homo sapiens)

Ensembl gene IDs: ENSG00000004534

Ensembl transcript IDs: ENST00000266022.9, ENST00000419610.5, ENST00000421682.1, ENST00000422955.5, ENST00000425608.5, ENST00000433811.1, ENST00000434592.5, ENST00000441115.5, ENST00000442092.5, ENST00000443081.5, ENST00000446471.1, ENST00000454079.5, ENST00000464013.5, ENST00000466247.1, ENST00000483350.1, ENST00000488807.2, ENST00000491874.5

Found 802 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCTTTTGATGTCCTAAGCGTGACTCTTGGCCTTCTTCCCTCTTCCTaGGTTCAGGTTCCTTATCAGCTGGTCTTAGGGGCTGGTTGGGCT +
Preference number: 1 (lower is better)
Translates to: SFDVLSVTLGLLPSS*VQVPYQLVLGAGWA
Trigger: AGCCCAACCAGCCCCTAAGACCAGCTGATAAGGAACCTGAACCCAGGAAGAGGGAAGAAGGCCAAGAGTCACGCTTAGGACATCAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419610.5
3UTR TCA 90 bp TCCGCCTGCTTCGGGATTCACGCTCATCACGGTCATCCCTGTCTATaGTGGAACCGTATCTTCCACTACGCTCTGTTCTACTCACTCTTT +
Preference number: 1 (lower is better)
Translates to: SACFGIHAHHGHPCL*WNRIFHYALFYSLF
Trigger: AAAGAGTGAGTAGAACAGAGCGTAGTGGAAGATACGGTTCCATCATAGACAGGGATGACCGTGATGAGCGTGAATCCCGAAGCAGGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434592.5
3UTR TCA 90 bp ATCATATCTATCACCCCTCCGATCATCACTAGATCTTTTGTAATCTaGGTCCCTCCGCCTGCTTCGGGATTCACGCTCATCACGGTCATC +
Preference number: 1 (lower is better)
Translates to: IISITPPIITRSFVI*VPPPASGFTLITVI
Trigger: GATGACCGTGATGAGCGTGAATCCCGAAGCAGGCGGAGGGACTCAGATTACAAAAGATCTAGTGATGATCGGAGGGGTGATAGATATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434592.5
3UTR TCA 90 bp GTCACTGATGTCATGCCTATAGTCGTGCTCACCATAGTCACCATCTaGATGGTAGCCATCTTCGGATCGGTCACTGTTCCTTCTTTCACG +
Preference number: 1 (lower is better)
Translates to: VTDVMPIVVLTIVTI*MVAIFGSVTVPSFT
Trigger: CGTGAAAGAAGGAACAGTGACCGATCCGAAGATGGCTACCATTCAGATGGTGACTATGGTGAGCACGACTATAGGCATGACATCAGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434592.5
3UTR TCA 90 bp GAAACTGCCTTCTGCAAAGCAGACAAGCCAGTTTATTCCAGTCAGTaGGTTTGTCTTCTTCATTCTCCTTCTTGGTTTGCTCCTCTCGCT +
Preference number: 1 (lower is better)
Translates to: ETAFCKADKPVYSSQ*VCLLHSPSWFAPLA
Trigger: AGCGAGAGGAGCAAACCAAGAAGGAGAATGAAGAAGACAAACTCACTGACTGGAATAAACTGGCTTGTCTGCTTTGCAGAAGGCAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
3UTR CCA 90 bp TCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAAGACTaGAGCTTTTCCCTGCGATCATTTCCTCTTCCTTTAAACTTTCCC +
Preference number: 1 (lower is better)
Translates to: SLEYLIRFLSGESKD*SFSLRSFPLPLNFP
Trigger: GGGAAAGTTTAAAGGAAGAGGAAATGATCGCAGGGAAAAGCTCCAGTCTTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
3UTR GCA 90 bp GGGCACATAGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTaGCAAGGGGTCATAATAGTAGCCAGTAGCAGAATCATATATGTA +
Preference number: 1 (lower is better)
Translates to: GHIDFLLGIGVIISS*QGVIIVASSRIIYV
Trigger: TACATATATGATTCTGCTACTGGCTACTATTATGACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCTATGTGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
3UTR GCA 90 bp ACCCACTGTCCACTTTTTCAAGAGCAACACTGTTCTTACCTGTATTaGCACAAGGCACTGATTTTCCATATAGGCAACAGTTCTGTTTCC +
Preference number: 1 (lower is better)
Translates to: THCPLFQEQHCSYLY*HKALIFHIGNSSVS
Trigger: GGAAACAGAACTGTTGCCTATATGGAAAATCAGTGCCTTGTGGCAATACAGGTAAGAACAGTGTTGCTCTTGAAAAAGTGGACAGTGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454079.5
3UTR TCA 90 bp GAACTTGTCTCCTTTCTTAATCGAGTTCTTTATATCGAGCAAACATaGCTCTTCGAACAGCATCTCGGTAAGTCTCGTTGGACTGTCTTT +
Preference number: 1 (lower is better)
Translates to: ELVSFLNRVLYIEQT*LFEQHLGKSRWTVF
Trigger: AAAGACAGTCCAACGAGACTTACCGAGATGCTGTTCGAAGAGTCATGTTTGCTCGATATAAAGAACTCGATTAAGAAAGGAGACAAGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
3UTR-3UTR CCA 90 bp CCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTAGTGTCTGCTCCTCTCGCTTCTaGGGCTGTGCTGTGCGGGGC +
Preference number: 2 (lower is better)
Translates to: PFPPASSLLDTASFAASVCSSRF*GCAVRG
Trigger: GCCCCGCACAGCACAGCCCCAGAAGCGAGAGGAGCA...GACACTAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
3UTR-3UTR TCA 90 bp CCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTAGTGTCTGTCTCTCCAGACCATaGCTCCCTCTCTCGGTCTCT +
Preference number: 2 (lower is better)
Translates to: PFPPASSLLDTASFAASVCLSRP*LPLSVS
Trigger: AGAGACCGAGAGAGGGAGTCATGGTCTGGAGAGACA...GACACTAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419610.5
3UTR-3UTR TCA 90 bp AGGCCTGTCCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGTCACTGGCATTTTCCTaGAACCTCGTCACTCCTCTG +
Preference number: 2 (lower is better)
Translates to: RPVPFLQPVACWTQPPLLSLAFS*NLVTPL
Trigger: CAGAGGAGTGACGAGGTTTCAGGAAAATGCCAGTGA...CAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGGACAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
3UTR-3UTR GCA 90 bp CCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTAGTGTCTCCAGGTTTTGCTTGTaGAGGTCTGACAGCTGCTGG +
Preference number: 2 (lower is better)
Translates to: PFPPASSLLDTASFAASVSRFCL*RSDSCW
Trigger: CCAGCAGCTGTCAGACCTGCACAAGCAAAACCTGGA...GACACTAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
3UTR-3UTR CCA 90 bp CCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTAGTGTCCCTAAGCGTGACTCTTaGCCTTCTTCCCTCTTCCTG +
Preference number: 2 (lower is better)
Translates to: PFPPASSLLDTASFAASVPKRDS*PSSLFL
Trigger: CAGGAAGAGGGAAGAAGGCCAAGAGTCACGCTTAGG...GACACTAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419610.5
3UTR-3UTR CCA 90 bp AGGCCTGTCCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGGGAGAGTCAAAAGACTaGAGCTTTTCCCTGCGATCA +
Preference number: 2 (lower is better)
Translates to: RPVPFLQPVACWTQPPLLGESKD*SFSLRS
Trigger: TGATCGCAGGGAAAAGCTCCAGTCTTTTGACTCTCC...CAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGGACAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
3UTR-3UTR CCA 90 bp CTCTTCGAACAGCATCTCGGTAAGTCTCGTTGGACTGTCTTTTGCTGGTTCTTCCTGAGGCTCCAACACTaGGGCCCCTCATCCGGCCTT +
Preference number: 2 (lower is better)
Translates to: LFEQHLGKSRWTVFCWFFLRLQH*GPSSGL
Trigger: AAGGCCGGATGAGGGGCCCCAGTGTTGGAGCCTCAG...GAAGAACCAGCAAAAGACAGTCCAACGAGACTTACCGAGATGCTGTTCGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
3UTR-3UTR GCA 90 bp GCAAAGCAGACAAGCCAGTTTATTCCAGTCAGTGAGTTTGTCTTCTTCATTCTCTCGCTTCTGGGGCTGTaGTGTGCGGGGCTGTGGGGG +
Preference number: 2 (lower is better)
Translates to: AKQTSQFIPVSEFVFFILSLLGL*CAGLWG
Trigger: CCCCCACAGCCCCGCACAGCACAGCCCCAGAAGCGA...GAGAATGAAGAAGACAAACTCACTGACTGGAATAAACTGGCTTGTCTGCTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
3UTR-3UTR TCA 90 bp TATTCACCCAAGAGGCCGATCAGTGGGTTTACCACTTTAGGTGGAGGGGGACTCCCACTTTTCATGCAATaGGCATCCAGAGAATCCAGG +
Preference number: 2 (lower is better)
Translates to: YSPKRPISGFTTLGGGGLPLFMQ*ASRESR
Trigger: CCTGGATTCTCTGGATGCTCATTGCATGAAAAGTGG...GAGTCCCCCTCCACCTAAAGTGGTAAACCCACTGATCGGCCTCTTGGGTGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454079.5
3UTR-3UTR CCA 90 bp CCTGTCCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTACTTCTTGCTGGGTATTaGGGTCATAATAAGTTCCTG +
Preference number: 2 (lower is better)
Translates to: PVPFLQPVACWTQPPLLLLLAGY*GHNKFL
Trigger: CAGGAACTTATTATGACCCCAATACCCAGCAAGAAG...TAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGGACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419610.5
3UTR-3UTR CCA 90 bp GAACAGCATCTCGGTAAGTCTCGTTGGACTGTCTTTTGCTGGTTCTTCCTGAGGGGGCCTTCCCTTCACTaGCATTTTCCTGAAACCTCG +
Preference number: 2 (lower is better)
Translates to: EQHLGKSRWTVFCWFFLRGPSLH*HFPETS
Trigger: CGAGGTTTCAGGAAAATGCCAGTGAAGGGAAGGCCC...CCTCAGGAAGAACCAGCAAAAGACAGTCCAACGAGACTTACCGAGATGCTGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
3UTR-3UTR GCA 90 bp GGGCCTTCGAAGGACTCCATCATTTCTCGAATATCGCTCTCTGTGATGGTGATGCTTAAAGACGTCTTCTaGAGGGGCCTTCCCTTCACT +
Preference number: 2 (lower is better)
Translates to: GPSKDSIISRISLSVMVMLKDVF*RGLPFT
Trigger: AGTGAAGGGAAGGCCCCTGCAGAAGACGTCTTTAAG...CATCACCATCACAGAGAGCGATATTCGAGAAATGATGGAGTCCTTCGAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434592.5
3UTR CAA 90 bp CCTGTCCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTaGCTGCTAGTGTCGATATCTTCTTTATCAACAAGTTTACGATCA +
Preference number: 2 (lower is better)
Translates to: PVPFLQPVACWTQPP*LLVSISSLSTSLRS
Trigger: TGATCGTAAACTTGTTGATAAAGAAGATATCGACACTAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGGACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
3UTR-3UTR TCA 90 bp GTATGGATGTTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGTGGGTTCTTGCAGAATaGACAGGAAGATCGGTGCCC +
Preference number: 2 (lower is better)
Translates to: VWMFSEAEGRLLILAWPLWVLAE*TGRSVP
Trigger: GGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCA...CAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAACATCCATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425608.5
3UTR-3UTR CCA 90 bp TATTCACCCAAGAGGCCGATCAGTGGGTTTACCACTTTAGGTGGAGGGGGACTCTTTTTCCAATGGTGCTaGTATGGATGTTTTCTGAGG +
Preference number: 2 (lower is better)
Translates to: YSPKRPISGFTTLGGGGLFFQWC*YGCFLR
Trigger: CCTCAGAAAACATCCATACCAGCACCATTGGAAAAA...GAGTCCCCCTCCACCTAAAGTGGTAAACCCACTGATCGGCCTCTTGGGTGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000419610.5
3UTR-3UTR CCA 90 bp GGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTCATAATAGTAGCCAGTAGCCGAAGAGCTTCCGCATaGGAGTCGAGGTCAATAAAG +
Preference number: 2 (lower is better)
Translates to: GIGVIISSCQGVIIVASSRRASA*ESRSIK
Trigger: CTTTATTGACCTCGACTCCCATGCGGAAGCTCTTCG...GCTACTGGCTACTATTATGACCCCTTGGCAGGAACTTATTATGACCCCAATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419610.5
3UTR-3UTR CCA 90 bp CATGACTCTTCGAACAGCATCTCGGTAAGTCTCGTTGGACTGTCTTTTGCTGGTGTTTACCACTTTAGGTaGAGGGGGACTCTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: HDSSNSISVSLVGLSFAGVYHFR*RGTLFL
Trigger: AAGGAAGAGAGTCCCCCTCCACCTAAAGTGGTAAAC...ACCAGCAAAAGACAGTCCAACGAGACTTACCGAGATGCTGTTCGAAGAGTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
3UTR CAA 90 bp TGCCTTCTGCAAAGCAGACAAGCCAGTTTATTCCAGTCAGTGAGTTaGTCTTCTTCATTCTCCTTCTTGGTTTGCTCCTCTCGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: CLLQSRQASLFQSVS*SSSFSFLVCSSRFW
Trigger: CCAGAAGCGAGAGGAGCAAACCAAGAAGGAGAATGAAGAAGACAAACTCACTGACTGGAATAAACTGGCTTGTCTGCTTTGCAGAAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
3UTR-3UTR GCA 90 bp CAGGTTCCTTATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGTTTTTCCAATGGTaGTGGTATGGATGTTTTCTG +
Preference number: 2 (lower is better)
Translates to: QVPYQLVLGAGWAVFPMVLFFQW*WYGCFL
Trigger: CAGAAAACATCCATACCAGCACCATTGGAAAAACAG...CACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATAAGGAACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000425608.5
3UTR-3UTR GCA 90 bp CTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTAGTGTCGATATCTCTTTTCCACTTTTCATaGAATGAGCATCCAGAGAAT +
Preference number: 2 (lower is better)
Translates to: LQPVACWTQPPLLLVSISLFHFS*NEHPEN
Trigger: ATTCTCTGGATGCTCATTGCATGAAAAGTGGAAAAG...AGATATCGACACTAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454079.5
3UTR-3UTR CCA 90 bp AGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTCATAATGCTGGTCTTAGGGGCTaGTTGGGCTGTTTTTCCAAT +
Preference number: 2 (lower is better)
Translates to: RLLAGYWGHNKFLPRGHNAGLRG*LGCFSN
Trigger: ATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGC...ATTATGACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000419610.5
3UTR-3UTR TCA 90 bp TTACGATCACTGTCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTTCCTTCTTGCTACTTaGCTTTCCTTGACTGGTGGG +
Preference number: 2 (lower is better)
Translates to: LRSLSVSLEYLIRFLSGEFLLAT*LSLTGG
Trigger: CCCACCAGTCAAGGAAAGTCAAGTAGCAAGAAGGAA...CTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGACAGTGATCGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
3UTR-3UTR CCA 90 bp GAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCTTGTCTTAGGGGCTGGTTaGGCTGTTTTTCCAATGGTG +
Preference number: 2 (lower is better)
Translates to: ETNKTRGRLYPMELVSFLVLGAG*AVFPMV
Trigger: CACCATTGGAAAAACAGCCCAACCAGCCCCTAAGAC...AAGAAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419610.5
3UTR-3UTR CCA 90 bp ATCACGGTCATCCCTGTCTATGATGGAACCGTATCTTCCACTACGCTCTGTTCTCTTCTTGCTGGGTATTaGGGTCATAATAAGTTCCTG +
Preference number: 2 (lower is better)
Translates to: ITVIPVYDGTVSSTTLCSLLAGY*GHNKFL
Trigger: CAGGAACTTATTATGACCCCAATACCCAGCAAGAAG...AGAACAGAGCGTAGTGGAAGATACGGTTCCATCATAGACAGGGATGACCGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434592.5
3UTR-3UTR CCA 90 bp GCAAAGCAGACAAGCCAGTTTATTCCAGTCAGTGAGTTTGTCTTCTTCATTCTCCAAGAGGCCGATCAGTaGGTTTACCACTTTAGGTGG +
Preference number: 2 (lower is better)
Translates to: AKQTSQFIPVSEFVFFILQEADQ*VYHFRW
Trigger: CCACCTAAAGTGGTAAACCCACTGATCGGCCTCTTG...GAGAATGAAGAAGACAAACTCACTGACTGGAATAAACTGGCTTGTCTGCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
3UTR-3UTR CCA 90 bp CCTTATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATTATTAATTCTTGCTTaGCCTCTGTCACTTCTCTTG +
Preference number: 2 (lower is better)
Translates to: PYQLVLGAGWAVFPMVLVLLILA*PLSLLL
Trigger: CAAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAA...TACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
3UTR-3UTR GCA 90 bp GGGCCTTCGAAGGACTCCATCATTTCTCGAATATCGCTCTCTGTGATGGTGATGGTCATAATAAGTTCCTaGCAAGGGGTCATAATAGTA +
Preference number: 2 (lower is better)
Translates to: GPSKDSIISRISLSVMVMVIISS*QGVIIV
Trigger: TACTATTATGACCCCTTGGCAGGAACTTATTATGAC...CATCACCATCACAGAGAGCGATATTCGAGAAATGATGGAGTCCTTCGAAGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434592.5
3UTR-3UTR CCA 90 bp GGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTCATAATAGTAGCCAGTAGCGGGCTGTTTTTCCAATaGTGCTGGTATGGATGTTTT +
Preference number: 2 (lower is better)
Translates to: GIGVIISSCQGVIIVASSGLFFQ*CWYGCF
Trigger: AAAACATCCATACCAGCACCATTGGAAAAACAGCCC...GCTACTGGCTACTATTATGACCCCTTGGCAGGAACTTATTATGACCCCAATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419610.5
3UTR-3UTR CCA 90 bp TTTCTGGAGAGTCAAAAGACTGGAGCTTTTCCCTGCGATCATTTCCTCTTCCTTTTCTTCGTTTTCCAGTaGCCAGGTTTACAGCTACCA +
Preference number: 2 (lower is better)
Translates to: FLESQKTGAFPCDHFLFLFFVFQ*PGLQLP
Trigger: TGGTAGCTGTAAACCTGGCCACTGGAAAACGAAGAA...AAGGAAGAGGAAATGATCGCAGGGAAAAGCTCCAGTCTTTTGACTCTCCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
3UTR-3UTR CCA 90 bp GCAAAGCAGACAAGCCAGTTTATTCCAGTCAGTGAGTTTGTCTTCTTCATTCTCGTTTACCACTTTAGGTaGAGGGGGACTCTCTTCCTT +
Preference number: 2 (lower is better)
Translates to: AKQTSQFIPVSEFVFFILVYHFR*RGTLFL
Trigger: AAGGAAGAGAGTCCCCCTCCACCTAAAGTGGTAAAC...GAGAATGAAGAAGACAAACTCACTGACTGGAATAAACTGGCTTGTCTGCTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
3UTR-3UTR TCA 90 bp GGAGGTTGTATCCCATGGAACTTGTCTCCTTTCTTAATCGAGTTCTTTATATCGTTCCTTCTTGCTACTTaGCTTTCCTTGACTGGTGGG +
Preference number: 2 (lower is better)
Translates to: GGCIPWNLSPFLIEFFISFLLAT*LSLTGG
Trigger: CCCACCAGTCAAGGAAAGTCAAGTAGCAAGAAGGAA...CGATATAAAGAACTCGATTAAGAAAGGAGACAAGTTCCATGGGATACAACCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
3UTR-3UTR CCA 90 bp TGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGGAGTCAAGAGGCCGATCAGTaGGTTTACCACTTTAGGTGG +
Preference number: 2 (lower is better)
Translates to: CRYLLYQQVYDHCQFPWSQEADQ*VYHFRW
Trigger: CCACCTAAAGTGGTAAACCCACTGATCGGCCTCTTG...ACTCCAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
3UTR-3UTR CCA 90 bp TTACGATCACTGTCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTTGCTGCGATACAGTTaGAAACAAGTAAGTCTACAG +
Preference number: 2 (lower is better)
Translates to: LRSLSVSLEYLIRFLSGELLRYS*KQVSLQ
Trigger: CTGTAGACTTACTTGTTTCCAACTGTATCGCAGCAA...CTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGACAGTGATCGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
3UTR-3UTR TCA 90 bp TTTCTGGAGAGTCAAAAGACTGGAGCTTTTCCCTGCGATCATTTCCTCTTCCTTGTTTATTCCAGTCAGTaGGTTTGTCTTCTTCATTCT +
Preference number: 2 (lower is better)
Translates to: FLESQKTGAFPCDHFLFLVYSSQ*VCLLHS
Trigger: AGAATGAAGAAGACAAACTCACTGACTGGAATAAAC...AAGGAAGAGGAAATGATCGCAGGGAAAAGCTCCAGTCTTTTGACTCTCCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
3UTR CAA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTaGTCTCCTTTCTTAATCGAGTTCTTTATATCGAGCAAACATGAC +
Preference number: 2 (lower is better)
Translates to: KERQTKQEGGCIPWN*SPFLIEFFISSKHD
Trigger: GTCATGTTTGCTCGATATAAAGAACTCGATTAAGAAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
3UTR-3UTR CCA 90 bp ATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGGAGTACTTATTCTTCGTTTTCCAGTaGCCAGGTTTACAGCTACCA +
Preference number: 2 (lower is better)
Translates to: ISSLSTSLRSLSVSLEYLFFVFQ*PGLQLP
Trigger: TGGTAGCTGTAAACCTGGCCACTGGAAAACGAAGAA...TAAGTACTCCAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419610.5
3UTR-3UTR CAA 90 bp CTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTAGTGTCGATATCTGGTCTCTTCGGAAAGTaGGCCCTTCCCTTCGAGAAG +
Preference number: 3 (lower is better)
Translates to: LQPVACWTQPPLLLVSISGLFGK*ALPFEK
Trigger: CTTCTCGAAGGGAAGGGCCAACTTTCCGAAGAGACC...AGATATCGACACTAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419610.5
3UTR CCA 72 bp ACTGTCTCCTCCATATTCACCCAAGAGGCCGATCAGTaGGTTTACCACTTTAGGTGGAGGGGGACTCTCTTC +
Preference number: 3 (lower is better)
Translates to: TVSSIFTQEADQ*VYHFRWRGTLF
Trigger: GAAGAGAGTCCCCCTCCACCTAAAGTGGTAAACCCACTGATCGGCCTCTTGGGTGAATATGGAGGAGACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
3UTR-3UTR CAA 90 bp GGGCCTTCGAAGGACTCCATCATTTCTCGAATATCGCTCTCTGTGATGGTGATGATTCTCCTTCTTGGTTaGCTCCTCTCGCTTCTGGGG +
Preference number: 3 (lower is better)
Translates to: GPSKDSIISRISLSVMVMILLLG*LLSLLG
Trigger: CCCCAGAAGCGAGAGGAGCAAACCAAGAAGGAGAAT...CATCACCATCACAGAGAGCGATATTCGAGAAATGATGGAGTCCTTCGAAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434592.5
3UTR TCA 72 bp TTCGGGATTCACGCTCATCACGGTCATCCCTGTCTATaGTGGAACCGTATCTTCCACTACGCTCTGTTCTAC +
Preference number: 3 (lower is better)
Translates to: FGIHAHHGHPCL*WNRIFHYALFY
Trigger: GTAGAACAGAGCGTAGTGGAAGATACGGTTCCATCATAGACAGGGATGACCGTGATGAGCGTGAATCCCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434592.5
3UTR TCA 72 bp GTCATGCCTATAGTCGTGCTCACCATAGTCACCATCTaGATGGTAGCCATCTTCGGATCGGTCACTGTTCCT +
Preference number: 3 (lower is better)
Translates to: VMPIVVLTIVTI*MVAIFGSVTVP
Trigger: AGGAACAGTGACCGATCCGAAGATGGCTACCATTCAGATGGTGACTATGGTGAGCACGACTATAGGCATGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434592.5
3UTR-3UTR CAA 90 bp GCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGATGTTAAAACAAGAGGGAGGTaGTATCCCATGGAACTTGTC +
Preference number: 3 (lower is better)
Translates to: AGLRGWLGCFSNGAGMDVKTRGR*YPMELV
Trigger: GACAAGTTCCATGGGATACAACCTCCCTCTTGTTTT...AACATCCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419610.5
3UTR-3UTR CAA 90 bp CCCACTCCAGGGACCAGGACACATTCAGACCACCCACTGTCCACTTTTTCAAGACTGTTCTTACCTGTATaGCCACAAGGCACTGATTTT +
Preference number: 3 (lower is better)
Translates to: PTPGTRTHSDHPLSTFSRLFLPV*PQGTDF
Trigger: AAAATCAGTGCCTTGTGGCAATACAGGTAAGAACAG...TCTTGAAAAAGTGGACAGTGGGTGGTCTGAATGTGTCCTGGTCCCTGGAGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454079.5
3UTR CCA 72 bp GTTCAGGTTCCTTATCAGCTGGTCTTAGGGGCTGGTTaGGCTGTTTTTCCAATGGTGCTGGTATGGATGTTT +
Preference number: 3 (lower is better)
Translates to: VQVPYQLVLGAG*AVFPMVLVWMF
Trigger: AAACATCCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATAAGGAACCTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000425608.5
3UTR-3UTR CAA 90 bp CCAGATAGGCTAGCTCCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTGTTGTCCTTGTCGATTaGTATCTGAAGACCAGTCTG +
Preference number: 3 (lower is better)
Translates to: PDRLAPAQTVLSSGGFPGVVLVD*YLKTSL
Trigger: CAGACTGGTCTTCAGATACAAATCGACAAGGACAAC...ACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGGAGCTAGCCTATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
3UTR-3UTR CAA 90 bp GGGCCTTCGAAGGACTCCATCATTTCTCGAATATCGCTCTCTGTGATGGTGATGGTTGTCCTTGTCGATTaGTATCTGAAGACCAGTCTG +
Preference number: 3 (lower is better)
Translates to: GPSKDSIISRISLSVMVMVVLVD*YLKTSL
Trigger: CAGACTGGTCTTCAGATACAAATCGACAAGGACAAC...CATCACCATCACAGAGAGCGATATTCGAGAAATGATGGAGTCCTTCGAAGGCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434592.5
3UTR-3UTR CAA 90 bp CTCTTCGAACAGCATCTCGGTAAGTCTCGTTGGACTGTCTTTTGCTGGTTCTTCTCTTCATTCTCCTTCTaGGTTTGCTCCTCTCGCTTC +
Preference number: 3 (lower is better)
Translates to: LFEQHLGKSRWTVFCWFFSSFSF*VCSSRF
Trigger: GAAGCGAGAGGAGCAAACCAAGAAGGAGAATGAAGA...GAAGAACCAGCAAAAGACAGTCCAACGAGACTTACCGAGATGCTGTTCGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
3UTR-3UTR CAA 90 bp TATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGACTTCTCTTGGGTTCTaGCAGAATGAACAGGAAGAT +
Preference number: 3 (lower is better)
Translates to: YQLVLGAGWAVFPMVLVWTSLGF*QNEQED
Trigger: ATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGT...CCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
3UTR-3UTR CAA 90 bp CATGACTCTTCGAACAGCATCTCGGTAAGTCTCGTTGGACTGTCTTTTGCTGGTTTTCCTTCTTGCTACTaGACTTTCCTTGACTGGTGG +
Preference number: 3 (lower is better)
Translates to: HDSSNSISVSLVGLSFAGFPSCY*TFLDWW
Trigger: CCACCAGTCAAGGAAAGTCAAGTAGCAAGAAGGAAA...ACCAGCAAAAGACAGTCCAACGAGACTTACCGAGATGCTGTTCGAAGAGTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
3UTR GCA 72 bp GACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTaGCAAGGGGTCATAATAGTAGCCAGTAGCAGAATC +
Preference number: 3 (lower is better)
Translates to: DFLLGIGVIISS*QGVIIVASSRI
Trigger: GATTCTGCTACTGGCTACTATTATGACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
3UTR-3UTR CAA 90 bp CTGTCCACTTTTTCAAGAGCAACACTGTTCTTACCTGTATTGCCACAAGGCACTAAAACAAGAGGGAGGTaGTATCCCATGGAACTTGTC +
Preference number: 3 (lower is better)
Translates to: LSTFSRATLFLPVLPQGTKTRGR*YPMELV
Trigger: GACAAGTTCCATGGGATACAACCTCCCTCTTGTTTT...AGTGCCTTGTGGCAATACAGGTAAGAACAGTGTTGCTCTTGAAAAAGTGGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454079.5
3UTR CCA 72 bp TTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTaGCCTCTGTCACTTCTCTTGGGTTCTTGCAGAATG +
Preference number: 3 (lower is better)
Translates to: FSEAEGRLLILA*PLSLLLGSCRM
Trigger: CATTCTGCAAGAACCCAAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425608.5
3UTR-3UTR CAA 90 bp TCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAAGACTGGGACAGCTGCTGGTGTTaGATCAGAACTTCTTTATTG +
Preference number: 3 (lower is better)
Translates to: SVSLEYLIRFLSGESKDWDSCWC*IRTSLL
Trigger: CAATAAAGAAGTTCTGATCAAACACCAGCAGCTGTC...CCAGTCTTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
3UTR-3UTR CAA 90 bp TTTCTGGAGAGTCAAAAGACTGGAGCTTTTCCCTGCGATCATTTCCTCTTCCTTCTTGCTGCGATACAGTaGGAAACAAGTAAGTCTACA +
Preference number: 3 (lower is better)
Translates to: FLESQKTGAFPCDHFLFLLAAIQ*ETSKST
Trigger: TGTAGACTTACTTGTTTCCAACTGTATCGCAGCAAG...AAGGAAGAGGAAATGATCGCAGGGAAAAGCTCCAGTCTTTTGACTCTCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454079.5
3UTR TCA 72 bp TCCTTTCTTAATCGAGTTCTTTATATCGAGCAAACATaGCTCTTCGAACAGCATCTCGGTAAGTCTCGTTGG +
Preference number: 3 (lower is better)
Translates to: SFLNRVLYIEQT*LFEQHLGKSRW
Trigger: CCAACGAGACTTACCGAGATGCTGTTCGAAGAGTCATGTTTGCTCGATATAAAGAACTCGATTAAGAAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
3UTR GCA 72 bp CCACTTTTTCAAGAGCAACACTGTTCTTACCTGTATTaGCACAAGGCACTGATTTTCCATATAGGCAACAGT +
Preference number: 3 (lower is better)
Translates to: PLFQEQHCSYLY*HKALIFHIGNS
Trigger: ACTGTTGCCTATATGGAAAATCAGTGCCTTGTGGCAATACAGGTAAGAACAGTGTTGCTCTTGAAAAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR GCA 90 bp CCTCAGGTAATCCAGGATCCTGGGGCACATAGACTTCTTGCTGGGTATTGGGGTTCGCTTCTGGGGCTGTaGTGTGCGGGGCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: PQVIQDPGAHRLLAGYWGSLLGL*CAGLWG
Trigger: CCCCCACAGCCCCGCACAGCACAGCCCCAGAAGCGA...ACCCCAATACCCAGCAAGAAGTCTATGTGCCCCAGGATCCTGGATTACCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR GCA 90 bp GCATGTGGTCAGAATGGTCCCCAGAATCATTTCTTCGTTTTCCAGTGGCCAGGTTCCGCGCGGGGCCACTaGTACCACAAAGGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: ACGQNGPQNHFFVFQWPGSARGH*YHKGAA
Trigger: CGCGGCGCCTTTGTGGTAGCAGTGGCCCCGCGCGGA...ACCTGGCCACTGGAAAACGAAGAAATGATTCTGGGGACCATTCTGACCACATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419610.5
CDS-3UTR TCA 90 bp GAGTCCCTCCGCCTGCTTCGGGATTCACGCTCATCACGGTCATCCCTGTCTATGTGTCTCTCCAGACCATaGCTCCCTCTCTCGGTCTCT +
Preference number: 4 (lower is better)
Translates to: ESLRLLRDSRSSRSSLSMCLSRP*LPLSVS
Trigger: AGAGACCGAGAGAGGGAGTCATGGTCTGGAGAGACA...CATAGACAGGGATGACCGTGATGAGCGTGAATCCCGAAGCAGGCGGAGGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR GCA 90 bp CTCATAGTCACTGTCTCCTCCATATTCACCCAAGAGGCCGATCAGTGGGTTTACTCGCTTCTGGGGCTGTaGTGTGCGGGGCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: LIVTVSSIFTQEADQWVYSLLGL*CAGLWG
Trigger: CCCCCACAGCCCCGCACAGCACAGCCCCAGAAGCGA...GTAAACCCACTGATCGGCCTCTTGGGTGAATATGGAGGAGACAGTGACTATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR TCA 90 bp CCCACTCCAGGGACCAGGACACATTCAGACCACCCACTGTCCACTTTTTCAAGAAAGTGCCCCGGCCCCTaGAGTCAGATGGAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: PTPGTRTHSDHPLSTFSRKCPGP*SQMEEH
Trigger: ATGCTCCTCCATCTGACTTCAGGGGCCGGGGCACTT...TCTTGAAAAAGTGGACAGTGGGTGGTCTGAATGTGTCCTGGTCCCTGGAGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR TCA 90 bp CCTGTCCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTATGTCTCTCCAGACCATaGCTCCCTCTCTCGGTCTCT +
Preference number: 4 (lower is better)
Translates to: PVPFLQPVACWTQPPLLLCLSRP*LPLSVS
Trigger: AGAGACCGAGAGAGGGAGTCATGGTCTGGAGAGACA...TAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp CCTGTCCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTAGCCCCTGAAGTCAGATaGAGGAGCATCCCTACCTCT +
Preference number: 4 (lower is better)
Translates to: PVPFLQPVACWTQPPLLLAPEVR*RSIPTS
Trigger: AGAGGTAGGGATGCTCCTCCATCTGACTTCAGGGGC...TAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGGACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTCCGCGCGGGGCCACTaGTACCACAAAGGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFSARGH*YHKGAA
Trigger: CGCGGCGCCTTTGTGGTAGCAGTGGCCCCGCGCGGA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
CDS-3UTR GCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCCGCGCGGGGCCACTaGTACCACAAAGGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPSARGH*YHKGAA
Trigger: CGCGGCGCCTTTGTGGTAGCAGTGGCCCCGCGCGGA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
CDS-3UTR CCA 90 bp CTCTTCGAACAGCATCTCGGTAAGTCTCGTTGGACTGTCTTTTGCTGGTTCTTCTGCTCCTCTCGCTTCTaGGGCTGTGCTGTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: LFEQHLGKSRWTVFCWFFCSSRF*GCAVRG
Trigger: GCCCCGCACAGCACAGCCCCAGAAGCGAGAGGAGCA...GAAGAACCAGCAAAAGACAGTCCAACGAGACTTACCGAGATGCTGTTCGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GCTTGGCCTCTGTCACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCGGTAAGTGCCCCGGCCCCTaGAGTCAGATGGAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: AWPLSLLLGSCRMNRKIGKCPGP*SQMEEH
Trigger: ATGCTCCTCCATCTGACTTCAGGGGCCGGGGCACTT...ACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGTGACAGAGGCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR TCA 90 bp CCTGTCCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTAAAACAGACCAGCATCTaGACTCTGCTCTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: PVPFLQPVACWTQPPLLLKQTSI*TLLFTS
Trigger: GGACGTGAAGAGCAGAGTTCAGATGCTGGTCTGTTT...TAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR TCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCGGCCCGCTGGGAGATaGAGTACAGCTGCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLRPAGR*STAAGP
Trigger: GGGACCGGCAGCTGTACTTCATCTCCCAGCGGGCCG...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442092.5
ENST00000443081.5
CDS-3UTR TCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTCGGCCCGCTGGGAGATaGAGTACAGCTGCCGGTCCC +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPRPAGR*STAAGP
Trigger: GGGACCGGCAGCTGTACTTCATCTCCCAGCGGGCCG...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442092.5
ENST00000443081.5
CDS-3UTR GCA 90 bp TCCTCTTCATCAGCCTCACATCCGCAGGCTGAGGGCCTTCGAAGGACTCCATCACTTAAAGACGTCTTCTaGAGGGGCCTTCCCTTCACT +
Preference number: 4 (lower is better)
Translates to: SSSSASHPQAEGLRRTPSLKDVF*RGLPFT
Trigger: AGTGAAGGGAAGGCCCCTGCAGAAGACGTCTTTAAG...TGATGGAGTCCTTCGAAGGCCCTCAGCCTGCGGATGTGAGGCTGATGAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR GCA 90 bp CCTGTCCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTACTTAAAGACGTCTTCTaGAGGGGCCTTCCCTTCACT +
Preference number: 4 (lower is better)
Translates to: PVPFLQPVACWTQPPLLLLKDVF*RGLPFT
Trigger: AGTGAAGGGAAGGCCCCTGCAGAAGACGTCTTTAAG...TAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTCGCTTCTGGGGCTGTaGTGTGCGGGGCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFSLLGL*CAGLWG
Trigger: CCCCCACAGCCCCGCACAGCACAGCCCCAGAAGCGA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCGCTTCTGGGGCTGTaGTGTGCGGGGCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPSLLGL*CAGLWG
Trigger: CCCCCACAGCCCCGCACAGCACAGCCCCAGAAGCGA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTCCGCGCGGGGCCACTaGTACCACAAAGGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSSARGH*YHKGAA
Trigger: CGCGGCGCCTTTGTGGTAGCAGTGGCCCCGCGCGGA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
CDS-3UTR CCA 90 bp GACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGGTCTGACAGCCTGAGGCTCCAACACTaGGGCCCCTCATCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: DCFIFRWISRFCLCRSDSLRLQH*GPSSGL
Trigger: AAGGCCGGATGAGGGGCCCCAGTGTTGGAGCCTCAG...GCTGTCAGACCTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR GCA 90 bp TGGCCTCTGTCACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCGGTGCCCCTTCCCCTAAAATCTaGATGGGATCCATCCCGGCC +
Preference number: 4 (lower is better)
Translates to: WPLSLLLGSCRMNRKIGAPSPKI*MGSIPA
Trigger: GGCCGGGATGGATCCCATGCAGATTTTAGGGGAAGG...GGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGTGACAGAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR GCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTCGCTTCTGGGGCTGTaGTGTGCGGGGCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLSLLGL*CAGLWG
Trigger: CCCCCACAGCCCCGCACAGCACAGCCCCAGAAGCGA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTCGCTTCTGGGGCTGTaGTGTGCGGGGCTGTGGGGG +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSSLLGL*CAGLWG
Trigger: CCCCCACAGCCCCGCACAGCACAGCCCCAGAAGCGA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp CCTGTCCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTATGGATTTCCAGGTTTTaGTTGTGCAGGTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: PVPFLQPVACWTQPPLLLWISRF*LCRSDS
Trigger: GCTGTCAGACCTGCACAAGCAAAACCTGGAAATCCA...TAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGGACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTCTTACTCCCGCCGTaGCCCGCGCGCAGGGGACTT +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSLLLPP*PARRGL
Trigger: AAGTCCCCTGCGCGCGGGGCACGGCGGGAGTAAGAG...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442092.5
CDS-3UTR CCA 90 bp GCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGATGTTGCCCCTGAAGTCAGATaGAGGAGCATCCCTACCTCT +
Preference number: 4 (lower is better)
Translates to: AGLRGWLGCFSNGAGMDVAPEVR*RSIPTS
Trigger: AGAGGTAGGGATGCTCCTCCATCTGACTTCAGGGGC...AACATCCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CCA 90 bp CCTCAGGTAATCCAGGATCCTGGGGCACATAGACTTCTTGCTGGGTATTGGGGTGTCTCTTCGGAAAGTTaGCCCTTCCCTTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: PQVIQDPGAHRLLAGYWGVSSES*PFPSRR
Trigger: CCTTCTCGAAGGGAAGGGCCAACTTTCCGAAGAGAC...ACCCCAATACCCAGCAAGAAGTCTATGTGCCCCAGGATCCTGGATTACCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR CCA 90 bp TCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAAGACTGGTGCTCCTCTCGCTTCTaGGGCTGTGCTGTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SVSLEYLIRFLSGESKDWCSSRF*GCAVRG
Trigger: GCCCCGCACAGCACAGCCCCAGAAGCGAGAGGAGCA...CCAGTCTTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGCTCCTCTCGCTTCTaGGGCTGTGCTGTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLCSSRF*GCAVRG
Trigger: GCCCCGCACAGCACAGCCCCAGAAGCGAGAGGAGCA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGCTCCTCTCGCTTCTaGGGCTGTGCTGTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPCSSRF*GCAVRG
Trigger: GCCCCGCACAGCACAGCCCCAGAAGCGAGAGGAGCA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TTTCTGGAGAGTCAAAAGACTGGAGCTTTTCCCTGCGATCATTTCCTCTTCCTTTGCTCCTCTCGCTTCTaGGGCTGTGCTGTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: FLESQKTGAFPCDHFLFLCSSRF*GCAVRG
Trigger: GCCCCGCACAGCACAGCCCCAGAAGCGAGAGGAGCA...AAGGAAGAGGAAATGATCGCAGGGAAAAGCTCCAGTCTTTTGACTCTCCAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR TCA 90 bp CCTTATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTAGAGCATCCCTACCTCTaGAGTCAACAGCGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: PYQLVLGAGWAVFPMVLVEHPYL*SQQREH
Trigger: ATGCTCACGCTGTTGACTTCAGAGGTAGGGATGCTC...TACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR TCA 90 bp TATTCACCCAAGAGGCCGATCAGTGGGTTTACCACTTTAGGTGGAGGGGGACTCGGACTTTGGCTGTTCTaGAAGTCTGCTGGAGACTCA +
Preference number: 4 (lower is better)
Translates to: YSPKRPISGFTTLGGGGLGLWLF*KSAGDS
Trigger: TGAGTCTCCAGCAGACTTTCAGAACAGCCAAAGTCC...GAGTCCCCCTCCACCTAAAGTGGTAAACCCACTGATCGGCCTCTTGGGTGAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR TCA 90 bp GAACAGCATCTCGGTAAGTCTCGTTGGACTGTCTTTTGCTGGTTCTTCCTGAGGTGTCTCTCCAGACCATaGCTCCCTCTCTCGGTCTCT +
Preference number: 4 (lower is better)
Translates to: EQHLGKSRWTVFCWFFLRCLSRP*LPLSVS
Trigger: AGAGACCGAGAGAGGGAGTCATGGTCTGGAGAGACA...CCTCAGGAAGAACCAGCAAAAGACAGTCCAACGAGACTTACCGAGATGCTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR TCA 90 bp CCCATAGGGCCTGTTCTGTTCTTGATGATACGGACGTTGGCAGTAGTAAGGCGGTCACTGGCATTTTCCTaGAACCTCGTCACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PIGPVLFLMIRTLAVVRRSLAFS*NLVTPL
Trigger: CAGAGGAGTGACGAGGTTTCAGGAAAATGCCAGTGA...CCGCCTTACTACTGCCAACGTCCGTATCATCAAGAACAGAACAGGCCCTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419610.5
CDS-3UTR TCA 90 bp AGGCCTGTCCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGACAGCTGCTGGTGTTTaGTCAGAACTTCTTTATTGG +
Preference number: 4 (lower is better)
Translates to: RPVPFLQPVACWTQPPLLTAAGV*SELLYW
Trigger: CCAATAAAGAAGTTCTGATCAAACACCAGCAGCTGT...CAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGGACAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AGCTCCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCTTTGCTGGTTCTTCCTaGGGCTCCAACACTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SSCSDCFIFRWISRFCLCFAGSS*GSNTGA
Trigger: GGCCCCAGTGTTGGAGCCTCAGGAAGAACCAGCAAA...GCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR GCA 90 bp CCTGTCCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTACATCACGGTACTCCATaGTTCTGTAATCGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: PVPFLQPVACWTQPPLLLHHGTP*FCNRCL
Trigger: AAGACACCGATTACAGAAGCATGGAGTACCGTGATG...TAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR GCA 90 bp GAGTCCCTCCGCCTGCTTCGGGATTCACGCTCATCACGGTCATCCCTGTCTATGTTGCCTTACATCGTTTaGAGTACCAAAAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: ESLRLLRDSRSSRSSLSMLPYIV*STKNPG
Trigger: GCCTGGATTTTTGGTACTGCAAACGATGTAAGGCAA...CATAGACAGGGATGACCGTGATGAGCGTGAATCCCGAAGCAGGCGGAGGGACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR CCA 90 bp TCCAGGGACCAGGACACATTCAGACCACCCACTGTCCACTTTTTCAAGAGCAACTTAGAGTTCCCTGGTTaGCCTCCATGCATCCGATGG +
Preference number: 4 (lower is better)
Translates to: SRDQDTFRPPTVHFFKSNLEFPG*PPCIRW
Trigger: CCATCGGATGCATGGAGGCCAACCAGGGAACTCTAA...GTTGCTCTTGAAAAAGTGGACAGTGGGTGGTCTGAATGTGTCCTGGTCCCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp AGGCCTGTCCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGGGGCTGTTTTTCCAATaGTGCTGGTATGGATGTTTT +
Preference number: 4 (lower is better)
Translates to: RPVPFLQPVACWTQPPLLGLFFQ*CWYGCF
Trigger: AAAACATCCATACCAGCACCATTGGAAAAACAGCCC...CAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGGACAGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TCCAGGGACCAGGACACATTCAGACCACCCACTGTCCACTTTTTCAAGAGCAACCCTAAGCGTGACTCTTaGCCTTCTTCCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SRDQDTFRPPTVHFFKSNPKRDS*PSSLFL
Trigger: CAGGAAGAGGGAAGAAGGCCAAGAGTCACGCTTAGG...GTTGCTCTTGAAAAAGTGGACAGTGGGTGGTCTGAATGTGTCCTGGTCCCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp GAGTCCCTCCGCCTGCTTCGGGATTCACGCTCATCACGGTCATCCCTGTCTATGCTTCTTGCTGGGTATTaGGGTCATAATAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: ESLRLLRDSRSSRSSLSMLLAGY*GHNKFL
Trigger: CAGGAACTTATTATGACCCCAATACCCAGCAAGAAG...CATAGACAGGGATGACCGTGATGAGCGTGAATCCCGAAGCAGGCGGAGGGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTGCTCCTCTCGCTTCTaGGGCTGTGCTGTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSCSSRF*GCAVRG
Trigger: GCCCCGCACAGCACAGCCCCAGAAGCGAGAGGAGCA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTGCTCCTCTCGCTTCTaGGGCTGTGCTGTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLCSSRF*GCAVRG
Trigger: GCCCCGCACAGCACAGCCCCAGAAGCGAGAGGAGCA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GCATGTGGTCAGAATGGTCCCCAGAATCATTTCTTCGTTTTCCAGTGGCCAGGTGAAGCCAATCCAGGATaGCCATATCCCAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: ACGQNGPQNHFFVFQWPGEANPG*PYPRPV
Trigger: GACAGGCCTGGGATATGGCCATCCTGGATTGGCTTC...ACCTGGCCACTGGAAAACGAAGAAATGATTCTGGGGACCATTCTGACCACATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419610.5
CDS-3UTR CCA 90 bp AGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTCATAATCTGAGGCTCCAACACTaGGGCCCCTCATCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: RLLAGYWGHNKFLPRGHNLRLQH*GPSSGL
Trigger: AAGGCCGGATGAGGGGCCCCAGTGTTGGAGCCTCAG...ATTATGACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419610.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCTGAGGCTCCAACACTaGGGCCCCTCATCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFLRLQH*GPSSGL
Trigger: AAGGCCGGATGAGGGGCCCCAGTGTTGGAGCCTCAG...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCTGAGGCTCCAACACTaGGGCCCCTCATCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLLRLQH*GPSSGL
Trigger: AAGGCCGGATGAGGGGCCCCAGTGTTGGAGCCTCAG...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTCTGAGGCTCCAACACTaGGGCCCCTCATCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPLRLQH*GPSSGL
Trigger: AAGGCCGGATGAGGGGCCCCAGTGTTGGAGCCTCAG...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCAGCGCTCGGCCCGCTaGGAGATGAAGTACAGCTGC +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLQRSAR*EMKYSC
Trigger: GCAGCTGTACTTCATCTCCCAGCGGGCCGAGCGCTG...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442092.5
ENST00000443081.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCAGCGCTCGGCCCGCTaGGAGATGAAGTACAGCTGC +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFQRSAR*EMKYSC
Trigger: GCAGCTGTACTTCATCTCCCAGCGGGCCGAGCGCTG...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442092.5
ENST00000443081.5
CDS-3UTR TCA 90 bp TATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGCTGCCCCTAAAATCCTaGTCAGTCCTAGATCGGTGT +
Preference number: 4 (lower is better)
Translates to: YQLVLGAGWAVFPMVLVWLPLKS*SVLDRC
Trigger: ACACCGATCTAGGACTGATCAGGATTTTAGGGGCAG...CCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR TCA 90 bp CCTTATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTAGGACTTTGGCTGTTCTaGAAGTCTGCTGGAGACTCA +
Preference number: 4 (lower is better)
Translates to: PYQLVLGAGWAVFPMVLVGLWLF*KSAGDS
Trigger: TGAGTCTCCAGCAGACTTTCAGAACAGCCAAAGTCC...TACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR TCA 90 bp CCCACTCCAGGGACCAGGACACATTCAGACCACCCACTGTCCACTTTTTCAAGATTCCTTCTTGCTACTTaGCTTTCCTTGACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PTPGTRTHSDHPLSTFSRFLLAT*LSLTGG
Trigger: CCCACCAGTCAAGGAAAGTCAAGTAGCAAGAAGGAA...TCTTGAAAAAGTGGACAGTGGGTGGTCTGAATGTGTCCTGGTCCCTGGAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR GCA 90 bp CCTTATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTACTCTGCCAGGAAAGTTaGCAGAGTGTCTCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: PYQLVLGAGWAVFPMVLVLCQES*QSVSLE
Trigger: CTCAAGAGAGACACTCTGGCAACTTTCCTGGCAGAG...TACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR GCA 90 bp GCTTGGCCTCTGTCACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCGGTAAAGGAGGCCCCGAATaGCCCTGGAAATCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: AWPLSLLLGSCRMNRKIGKGGPE*PWKSKG
Trigger: TCCCTTTGATTTCCAGGGGCATTCGGGGCCTCCTTT...ACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGTGACAGAGGCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR GCA 90 bp TCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGATCCAGCATCTGAACTCTaGTCTTCACGTCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: SAGLRGWLGCFSNGAGMDPASEL*SSRPES
Trigger: GCTTTCTGGACGTGAAGAGCAGAGTTCAGATGCTGG...ATCCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR GCA 90 bp AGGCCTGTCCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGTTTCAACATGACTGCTaGAGAAAAAGCTTTCACCCA +
Preference number: 4 (lower is better)
Translates to: RPVPFLQPVACWTQPPLLFQHDC*RKSFHP
Trigger: TGGGTGAAAGCTTTTTCTGCAGCAGTCATGTTGAAA...CAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGGACAGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp CTGCTTCGGGATTCACGCTCATCACGGTCATCCCTGTCTATGATGGAACCGTATGCTGGTCTTAGGGGCTaGTTGGGCTGTTTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: LLRDSRSSRSSLSMMEPYAGLRG*LGCFSN
Trigger: ATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGC...ATACGGTTCCATCATAGACAGGGATGACCGTGATGAGCGTGAATCCCGAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR CCA 90 bp GAACAGCATCTCGGTAAGTCTCGTTGGACTGTCTTTTGCTGGTTCTTCCTGAGGCCTAAGCGTGACTCTTaGCCTTCTTCCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: EQHLGKSRWTVFCWFFLRPKRDS*PSSLFL
Trigger: CAGGAAGAGGGAAGAAGGCCAAGAGTCACGCTTAGG...CCTCAGGAAGAACCAGCAAAAGACAGTCCAACGAGACTTACCGAGATGCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGCGAAGAGCTTCCGCATaGGAGTCGAGGTCAATAAAG +
Preference number: 4 (lower is better)
Translates to: YQLVLGAGWAVFPMVLVWRRASA*ESRSIK
Trigger: CTTTATTGACCTCGACTCCCATGCGGAAGCTCTTCG...CCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419610.5
CDS-3UTR CCA 90 bp CTCATAGTCACTGTCTCCTCCATATTCACCCAAGAGGCCGATCAGTGGGTTTACGGGCCTTCCCTTCACTaGCATTTTCCTGAAACCTCG +
Preference number: 4 (lower is better)
Translates to: LIVTVSSIFTQEADQWVYGPSLH*HFPETS
Trigger: CGAGGTTTCAGGAAAATGCCAGTGAAGGGAAGGCCC...GTAAACCCACTGATCGGCCTCTTGGGTGAATATGGAGGAGACAGTGACTATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTGAGGCTCCAACACTaGGGCCCCTCATCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSLRLQH*GPSSGL
Trigger: AAGGCCGGATGAGGGGCCCCAGTGTTGGAGCCTCAG...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTAAGTGCCCCGGCCCCTaGAGTCAGATGGAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSKCPGP*SQMEEH
Trigger: ATGCTCCTCCATCTGACTTCAGGGGCCGGGGCACTT...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp CCCACTCCAGGGACCAGGACACATTCAGACCACCCACTGTCCACTTTTTCAAGAACGTCCAGAAAGCTGTaGCTTATCTTGGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: PTPGTRTHSDHPLSTFSRTSRKL*LILVLN
Trigger: GTTCAAGACCAAGATAAGTCACAGCTTTCTGGACGT...TCTTGAAAAAGTGGACAGTGGGTGGTCTGAATGTGTCCTGGTCCCTGGAGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR TCA 90 bp TCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGTCACTTCTCTTGCTTCCTGGCAGCCTATaGTCCACATCACGGTACTCC +
Preference number: 4 (lower is better)
Translates to: SEAEGRLLILAWPLSLLLLPGSL*STSRYS
Trigger: GGAGTACCGTGATGTGGATCATAGGCTGCCAGGAAG...CAAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR TCA 90 bp CTCCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGTGGGTTCTTGCAGAATaGACAGGAAGATCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LLLRLFYLPVDFQVLLVQWVLAE*TGRSVP
Trigger: GGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCA...CTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GGGCCTTCGAAGGACTCCATCATTTCTCGAATATCGCTCTCTGTGATGGTGATGTCACTGGCATTTTCCTaGAACCTCGTCACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GPSKDSIISRISLSVMVMSLAFS*NLVTPL
Trigger: CAGAGGAGTGACGAGGTTTCAGGAAAATGCCAGTGA...CATCACCATCACAGAGAGCGATATTCGAGAAATGATGGAGTCCTTCGAAGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR TCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTTTGCTGGTTCTTCCTaGGGCTCCAACACTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFFAGSS*GSNTGA
Trigger: GGCCCCAGTGTTGGAGCCTCAGGAAGAACCAGCAAA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTGCTGGTTCTTCCTaGGGCTCCAACACTGGGGCC +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPFAGSS*GSNTGA
Trigger: GGCCCCAGTGTTGGAGCCTCAGGAAGAACCAGCAAA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp CTCTTCGAACAGCATCTCGGTAAGTCTCGTTGGACTGTCTTTTGCTGGTTCTTCAAAGGAGGCCCCGAATaGCCCTGGAAATCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: LFEQHLGKSRWTVFCWFFKGGPE*PWKSKG
Trigger: TCCCTTTGATTTCCAGGGGCATTCGGGGCCTCCTTT...GAAGAACCAGCAAAAGACAGTCCAACGAGACTTACCGAGATGCTGTTCGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR GCA 90 bp TGGCCTCTGTCACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCGGTGCCCCTCTGGAAAAGACTTaGTCTGGCCATAGCCAAACA +
Preference number: 4 (lower is better)
Translates to: WPLSLLLGSCRMNRKIGAPLEKT*SGHSQT
Trigger: TGTTTGGCTATGGCCAGAGCAAGTCTTTTCCAGAGG...GGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGTGACAGAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR GCA 90 bp GCACATAGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTTCCAGGTTTTGCTTGTaGAGGTCTGACAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: AHRLLAGYWGHNKFLPRGSRFCL*RSDSCW
Trigger: CCAGCAGCTGTCAGACCTGCACAAGCAAAACCTGGA...ACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCTATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR GCA 90 bp CTCATAGTCACTGTCTCCTCCATATTCACCCAAGAGGCCGATCAGTGGGTTTACCGTTGGACTGTCTTTTaGTGGTTCTTCCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LIVTVSSIFTQEADQWVYRWTVF*WFFLRL
Trigger: GAGCCTCAGGAAGAACCAGCAAAAGACAGTCCAACG...GTAAACCCACTGATCGGCCTCTTGGGTGAATATGGAGGAGACAGTGACTATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AGGCCTGTCCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTTTTCCACTTTTCATaGAATGAGCATCCAGAGAAT +
Preference number: 4 (lower is better)
Translates to: RPVPFLQPVACWTQPPLLLFHFS*NEHPEN
Trigger: ATTCTCTGGATGCTCATTGCATGAAAAGTGGAAAAG...CAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGGACAGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp CTCATAGTCACTGTCTCCTCCATATTCACCCAAGAGGCCGATCAGTGGGTTTACGGGTTTCTCCTCACTTaGGCCGGTCCTATAATCTTG +
Preference number: 4 (lower is better)
Translates to: LIVTVSSIFTQEADQWVYGFLLT*AGPIIL
Trigger: CAAGATTATAGGACCGGCCCAAGTGAGGAGAAACCC...GTAAACCCACTGATCGGCCTCTTGGGTGAATATGGAGGAGACAGTGACTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAACAGCATCTCGGTAAGTCTCGTTGGACTGTCTTTTGCTGGTTCTTCCTGAGGGTCTTAGGGGCTGGTTaGGCTGTTTTTCCAATGGTG +
Preference number: 4 (lower is better)
Translates to: EQHLGKSRWTVFCWFFLRVLGAG*AVFPMV
Trigger: CACCATTGGAAAAACAGCCCAACCAGCCCCTAAGAC...CCTCAGGAAGAACCAGCAAAAGACAGTCCAACGAGACTTACCGAGATGCTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GCTTGGCCTCTGTCACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCGGTGCTGGTCTTAGGGGCTaGTTGGGCTGTTTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: AWPLSLLLGSCRMNRKIGAGLRG*LGCFSN
Trigger: ATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGC...ACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGTGACAGAGGCCAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CCA 90 bp CATGACTCTTCGAACAGCATCTCGGTAAGTCTCGTTGGACTGTCTTTTGCTGGTGTCTCTTCGGAAAGTTaGCCCTTCCCTTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HDSSNSISVSLVGLSFAGVSSES*PFPSRR
Trigger: CCTTCTCGAAGGGAAGGGCCAACTTTCCGAAGAGAC...ACCAGCAAAAGACAGTCCAACGAGACTTACCGAGATGCTGTTCGAAGAGTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
3UTR CAA 72 bp GGTTCAGGTTCCTTATCAGCTGGTCTTAGGGGCTGGTaGGGCTGTTTTTCCAATGGTGCTGGTATGGATGTT +
Preference number: 4 (lower is better)
Translates to: GSGSLSAGLRGW*GCFSNGAGMDV
Trigger: AACATCCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATAAGGAACCTGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000425608.5
CDS-3UTR TCA 90 bp TATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGATCGGTGTCTACCTCTaGAATCTGAATGTGGCGTAT +
Preference number: 4 (lower is better)
Translates to: YQLVLGAGWAVFPMVLVWIGVYL*NLNVAY
Trigger: ATACGCCACATTCAGATTTCAGAGGTAGACACCGAT...CCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR TCA 90 bp GCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGATGTTTCAAATTCTCCCTTCTaGATGCCAAAAGCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: AGLRGWLGCFSNGAGMDVSNSPF*MPKAGL
Trigger: AAGGCCTGCTTTTGGCATTCAGAAGGGAGAATTTGA...AACATCCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR TCA 90 bp GCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGATGTTGACTTATCTTGGTCTTaGACTGGACTTTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: AGLRGWLGCFSNGAGMDVDLSWS*TGLWLF
Trigger: GAACAGCCAAAGTCCAGTTCAAGACCAAGATAAGTC...AACATCCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR TCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTCTTCCTGGCAGCCTATaGTCCACATCACGGTACTCC +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPLPGSL*STSRYS
Trigger: GGAGTACCGTGATGTGGATCATAGGCTGCCAGGAAG...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp CTGTCCACTTTTTCAAGAGCAACACTGTTCTTACCTGTATTGCCACAAGGCACTCTTCCTGGCAGCCTATaGTCCACATCACGGTACTCC +
Preference number: 4 (lower is better)
Translates to: LSTFSRATLFLPVLPQGTLPGSL*STSRYS
Trigger: GGAGTACCGTGATGTGGATCATAGGCTGCCAGGAAG...AGTGCCTTGTGGCAATACAGGTAAGAACAGTGTTGCTCTTGAAAAAGTGGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR TCA 90 bp TCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGATCCAAAAATCCAGGCTTaGTACATACTCCAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: SAGLRGWLGCFSNGAGMDPKIQA*YILQGN
Trigger: GTTACCCTGGAGTATGTATCAAGCCTGGATTTTTGG...ATCCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR TCA 90 bp TCTTGCTTGGCCTCTGTCACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATTGGGTTCTTGCAGAATaGACAGGAAGATCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: SCLASVTSLGFLQNEQEDWVLAE*TGRSVP
Trigger: GGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCA...ATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGTGACAGAGGCCAAGCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR TCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGTCTCTCCAGACCATaGCTCCCTCTCTCGGTCTCT +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPCLSRP*LPLSVS
Trigger: AGAGACCGAGAGAGGGAGTCATGGTCTGGAGAGACA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp CCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTAGTGTCGTTTATTCCAGTCAGTaGGTTTGTCTTCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: PFPPASSLLDTASFAASVVYSSQ*VCLLHS
Trigger: AGAATGAAGAAGACAAACTCACTGACTGGAATAAAC...GACACTAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GTTGTCCTTGTCGATTTGTATCTGAAGACCAGTCTGAATTTCTGCCACCTCCCCTTGCTTGTGCAGGTCTaGCAGCTGCTGGTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: VVLVDLYLKTSLNFCHLPLLVQV*QLLVFD
Trigger: ATCAAACACCAGCAGCTGTCAGACCTGCACAAGCAA...GGGGAGGTGGCAGAAATTCAGACTGGTCTTCAGATACAAATCGACAAGGACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR TCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTTTGCTGGTTCTTCCTaGGGCTCCAACACTGGGGCC +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLFAGSS*GSNTGA
Trigger: GGCCCCAGTGTTGGAGCCTCAGGAAGAACCAGCAAA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTTTGCTGGTTCTTCCTaGGGCTCCAACACTGGGGCC +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSFAGSS*GSNTGA
Trigger: GGCCCCAGTGTTGGAGCCTCAGGAAGAACCAGCAAA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTCCTTCCCCTAAAATCTaGATGGGATCCATCCCGGCC +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPPSPKI*MGSIPA
Trigger: GGCCGGGATGGATCCCATGCAGATTTTAGGGGAAGG...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp TTACGATCACTGTCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGCCTTCCCCTAAAATCTaGATGGGATCCATCCCGGCC +
Preference number: 4 (lower is better)
Translates to: LRSLSVSLEYLIRFLSGEPSPKI*MGSIPA
Trigger: GGCCGGGATGGATCCCATGCAGATTTTAGGGGAAGG...CTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGACAGTGATCGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR GCA 90 bp CCCACTCCAGGGACCAGGACACATTCAGACCACCCACTGTCCACTTTTTCAAGAGCTGTTCTGAAAGTCTaGTGGAGACTCATGTTCAAA +
Preference number: 4 (lower is better)
Translates to: PTPGTRTHSDHPLSTFSRAVLKV*WRLMFK
Trigger: TTTGAACATGAGTCTCCAGCAGACTTTCAGAACAGC...TCTTGAAAAAGTGGACAGTGGGTGGTCTGAATGTGTCCTGGTCCCTGGAGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR GCA 90 bp CATGACTCTTCGAACAGCATCTCGGTAAGTCTCGTTGGACTGTCTTTTGCTGGTCATCTCGGGCAGTTTTaGCCTCTGGAAAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: HDSSNSISVSLVGLSFAGHLGQF*PLEKTC
Trigger: GCAAGTCTTTTCCAGAGGGCAAAACTGCCCGAGATG...ACCAGCAAAAGACAGTCCAACGAGACTTACCGAGATGCTGTTCGAAGAGTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR GCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTCCTGGTTGGCCTCCATaGATCCGATGGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPPGWPP*IRWHLP
Trigger: TGGAAGATGCCATCGGATGCATGGAGGCCAACCAGG...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp CCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTAGTGTCGTCATAATAAGTTCCTaGCAAGGGGTCATAATAGTA +
Preference number: 4 (lower is better)
Translates to: PFPPASSLLDTASFAASVVIISS*QGVIIV
Trigger: TACTATTATGACCCCTTGGCAGGAACTTATTATGAC...GACACTAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR GCA 90 bp CCAGATAGGCTAGCTCCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTGCAGGTCTGACAGCTaGTGGTGTTTGATCAGAACT +
Preference number: 4 (lower is better)
Translates to: PDRLAPAQTVLSSGGFPGCRSDS*WCLIRT
Trigger: AGTTCTGATCAAACACCAGCAGCTGTCAGACCTGCA...ACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGGAGCTAGCCTATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTCATAATAGTAGCCAGTAGCTCCAGGTTTTGCTTGTaGAGGTCTGACAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GIGVIISSCQGVIIVASSSRFCL*RSDSCW
Trigger: CCAGCAGCTGTCAGACCTGCACAAGCAAAACCTGGA...GCTACTGGCTACTATTATGACCCCTTGGCAGGAACTTATTATGACCCCAATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR CCA 90 bp CTGTCACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCGGTGCCCACCAAGCAAACCTTTCTTCTTaGCTCCCACGAAAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LSLLLGSCRMNRKIGAHQANLSS*LPRKGP
Trigger: TGGACCTTTTCGTGGGAGCCAAGAAGAAAGGTTTGC...TTGGTGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CCA 90 bp ACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCGGTGCCCACCAATGTTTGGCCCCGAATGCCCCTaGAAATCAAAGGGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: TSLGFLQNEQEDRCPPMFGPECP*KSKGSE
Trigger: TTCACTTCCCTTTGATTTCCAGGGGCATTCGGGGCC...AAACATTGGTGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CCA 90 bp CCTTATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTACCTATAGTCCATAGGTaGTCCTTCTCTATCCCGAAA +
Preference number: 4 (lower is better)
Translates to: PYQLVLGAGWAVFPMVLVPIVHR*SFSIPK
Trigger: TTTCGGGATAGAGAAGGACCACCTATGGACTATAGG...TACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGCCCCTGAAGTCAGATaGAGGAGCATCCCTACCTCT +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLAPEVR*RSIPTS
Trigger: AGAGGTAGGGATGCTCCTCCATCTGACTTCAGGGGC...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp ACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCGGTGCCCACCAATGTTTCCCCTAAAATCTGCATaGGATCCATCCCGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: TSLGFLQNEQEDRCPPMFPLKSA*DPSRPL
Trigger: TAGAGGCCGGGATGGATCCCATGCAGATTTTAGGGG...AAACATTGGTGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CCA 90 bp CTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTAGTGTCGATATCTGTAACTTCTTTGTCCTaGATCATTAGAGTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LQPVACWTQPPLLLVSISVTSLS*IIRVPW
Trigger: CCAGGGAACTCTAATGATCCAGGACAAAGAAGTTAC...AGATATCGACACTAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp CCCACTCCAGGGACCAGGACACATTCAGACCACCCACTGTCCACTTTTTCAAGAGGGCTGTTTTTCCAATaGTGCTGGTATGGATGTTTT +
Preference number: 4 (lower is better)
Translates to: PTPGTRTHSDHPLSTFSRGLFFQ*CWYGCF
Trigger: AAAACATCCATACCAGCACCATTGGAAAAACAGCCC...TCTTGAAAAAGTGGACAGTGGGTGGTCTGAATGTGTCCTGGTCCCTGGAGTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp GCACATAGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTGTCTTAGGGGCTGGTTaGGCTGTTTTTCCAATGGTG +
Preference number: 4 (lower is better)
Translates to: AHRLLAGYWGHNKFLPRGVLGAG*AVFPMV
Trigger: CACCATTGGAAAAACAGCCCAACCAGCCCCTAAGAC...ACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCTATGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR CCA 90 bp CATGACTCTTCGAACAGCATCTCGGTAAGTCTCGTTGGACTGTCTTTTGCTGGTGCTGGTCTTAGGGGCTaGTTGGGCTGTTTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: HDSSNSISVSLVGLSFAGAGLRG*LGCFSN
Trigger: ATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGC...ACCAGCAAAAGACAGTCCAACGAGACTTACCGAGATGCTGTTCGAAGAGTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp CTGGGGCACATAGACTTCTTGCTGCGATACAGTTGGAAACAAGTAAGTCTACAGGGGCCTTCCCTTCACTaGCATTTTCCTGAAACCTCG +
Preference number: 4 (lower is better)
Translates to: LGHIDFLLRYSWKQVSLQGPSLH*HFPETS
Trigger: CGAGGTTTCAGGAAAATGCCAGTGAAGGGAAGGCCC...CTGTAGACTTACTTGTTTCCAACTGTATCGCAGCAAGAAGTCTATGTGCCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp GACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGGTCTGACAGCCAAGAGGCCGATCAGTaGGTTTACCACTTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: DCFIFRWISRFCLCRSDSQEADQ*VYHFRW
Trigger: CCACCTAAAGTGGTAAACCCACTGATCGGCCTCTTG...GCTGTCAGACCTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CCA 90 bp ATCGGTCACTGTTCCTTCTTTCACGCTCTCTCTCTGGACTGTCATAGTCTCGGTGGAGAGTCAAAAGACTaGAGCTTTTCCCTGCGATCA +
Preference number: 4 (lower is better)
Translates to: IGHCSFFHALSLDCHSLGGESKD*SFSLRS
Trigger: TGATCGCAGGGAAAAGCTCCAGTCTTTTGACTCTCC...ACCGAGACTATGACAGTCCAGAGAGAGAGCGTGAAAGAAGGAACAGTGACCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGAAGCCAATCCAGGATaGCCATATCCCAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFEANPG*PYPRPV
Trigger: GACAGGCCTGGGATATGGCCATCCTGGATTGGCTTC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGAAGCCAATCCAGGATaGCCATATCCCAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLEANPG*PYPRPV
Trigger: GACAGGCCTGGGATATGGCCATCCTGGATTGGCTTC...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp TATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGGAAATCAAAGGGAAGTaGATCTCTGCCAGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: YQLVLGAGWAVFPMVLVWEIKGK*ISARKV
Trigger: AACTTTCCTGGCAGAGATTCACTTCCCTTTGATTTC...CCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR TCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGAGCATCCCTACCTCTaGAGTCAACAGCGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFEHPYL*SQQREH
Trigger: ATGCTCACGCTGTTGACTTCAGAGGTAGGGATGCTC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGAGCATCCCTACCTCTaGAGTCAACAGCGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPEHPYL*SQQREH
Trigger: ATGCTCACGCTGTTGACTTCAGAGGTAGGGATGCTC...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp CTCCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGTCTACCTCTGAAATCTaGATGTGGCGTATCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LLLRLFYLPVDFQVLLVQSTSEI*MWRIPV
Trigger: GACAGGGATACGCCACATTCAGATTTCAGAGGTAGA...CTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR TCA 90 bp ACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCGGTGCCCACCAATGTTTAAACAGACCAGCATCTaGACTCTGCTCTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: TSLGFLQNEQEDRCPPMFKQTSI*TLLFTS
Trigger: GGACGTGAAGAGCAGAGTTCAGATGCTGGTCTGTTT...AAACATTGGTGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR TCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTTCCTGGCAGCCTATaGTCCACATCACGGTACTCC +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSLPGSL*STSRYS
Trigger: GGAGTACCGTGATGTGGATCATAGGCTGCCAGGAAG...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTGGGTTCTTGCAGAATaGACAGGAAGATCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFWVLAE*TGRSVP
Trigger: GGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp TTACGATCACTGTCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTGGGTTCTTGCAGAATaGACAGGAAGATCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: LRSLSVSLEYLIRFLSGEWVLAE*TGRSVP
Trigger: GGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCA...CTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGACAGTGATCGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTGTCTCTCCAGACCATaGCTCCCTCTCTCGGTCTCT +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLCLSRP*LPLSVS
Trigger: AGAGACCGAGAGAGGGAGTCATGGTCTGGAGAGACA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTGTCTCTCCAGACCATaGCTCCCTCTCTCGGTCTCT +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSCLSRP*LPLSVS
Trigger: AGAGACCGAGAGAGGGAGTCATGGTCTGGAGAGACA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp CCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGGTCCACTTTTCATGCAATaGGCATCCAGAGAATCCAGG +
Preference number: 4 (lower is better)
Translates to: PAQTVLSSGGFPGFACAGPLFMQ*ASRESR
Trigger: CCTGGATTCTCTGGATGCTCATTGCATGAAAAGTGG...ACCTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR GCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTAAAGGAGGCCCCGAATaGCCCTGGAAATCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPKGGPE*PWKSKG
Trigger: TCCCTTTGATTTCCAGGGGCATTCGGGGCCTCCTTT...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp TCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGATGTAGTTCATATGAGGTaGCTCCCTACCTCTATAATC +
Preference number: 4 (lower is better)
Translates to: SAGLRGWLGCFSNGAGMDVVHMR*LPTSII
Trigger: GATTATAGAGGTAGGGAGGCACCTCATATGAACTAC...ATCCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR GCA 90 bp TCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGTCACTTCTCTTGCATCTCGGGCAGTTTTaGCCTCTGGAAAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: SEAEGRLLILAWPLSLLLHLGQF*PLEKTC
Trigger: GCAAGTCTTTTCCAGAGGGCAAAACTGCCCGAGATG...CAAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR GCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCCTGGTTGGCCTCCATaGATCCGATGGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLPGWPP*IRWHLP
Trigger: TGGAAGATGCCATCGGATGCATGGAGGCCAACCAGG...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp CTCATAGTCACTGTCTCCTCCATATTCACCCAAGAGGCCGATCAGTGGGTTTACGTGCCCACCAATGTTTaGCTTACATCGTTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: LIVTVSSIFTQEADQWVYVPTNV*LTSFAV
Trigger: TACTGCAAACGATGTAAGGCAAACATTGGTGGGCAC...GTAAACCCACTGATCGGCCTCTTGGGTGAATATGGAGGAGACAGTGACTATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434592.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGTCACTTCTCTTGGGTGAACAGGAAGATCGGTaGCCACCAATGTTTGCCTTA +
Preference number: 4 (lower is better)
Translates to: EAEGRLLILAWPLSLLLGEQEDR*PPMFAL
Trigger: TAAGGCAAACATTGGTGGGCACCGATCTTCCTGTTC...ACCCAAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR GCA 90 bp GACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGGTCTGACAGCTGGGAAACTGCCTTCTaGAAAGCAGACAAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: DCFIFRWISRFCLCRSDSWETAF*KADKPV
Trigger: AACTGGCTTGTCTGCTTTGCAGAAGGCAGTTTCCCA...GCTGTCAGACCTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCCAGGTTTTGCTTGTaGAGGTCTGACAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPSRFCL*RSDSCW
Trigger: CCAGCAGCTGTCAGACCTGCACAAGCAAAACCTGGA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCCAGGTTTTGCTTGTaGAGGTCTGACAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLSRFCL*RSDSCW
Trigger: CCAGCAGCTGTCAGACCTGCACAAGCAAAACCTGGA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTCCAGGTTTTGCTTGTaGAGGTCTGACAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFSRFCL*RSDSCW
Trigger: CCAGCAGCTGTCAGACCTGCACAAGCAAAACCTGGA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp CTCCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGTGGATTTCCAGGTTTTaGTTGTGCAGGTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: LLLRLFYLPVDFQVLLVQWISRF*LCRSDS
Trigger: GCTGTCAGACCTGCACAAGCAAAACCTGGAAATCCA...CTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGAGATGAAGTACAGCTaGCGGTCCCGCAGACTCTTA +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFEMKYS*RSRRLL
Trigger: TAAGAGTCTGCGGGACCGGCAGCTGTACTTCATCTC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442092.5
ENST00000443081.5
CDS-3UTR GCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGAGATGAAGTACAGCTaGCGGTCCCGCAGACTCTTA +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPEMKYS*RSRRLL
Trigger: TAAGAGTCTGCGGGACCGGCAGCTGTACTTCATCTC...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442092.5
ENST00000443081.5
CDS-3UTR CCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGGCCCCGAATGCCCCTaGAAATCAAAGGGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPGPECP*KSKGSE
Trigger: TTCACTTCCCTTTGATTTCCAGGGGCATTCGGGGCC...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGCCCCTGAAGTCAGATaGAGGAGCATCCCTACCTCT +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSAPEVR*RSIPTS
Trigger: AGAGGTAGGGATGCTCCTCCATCTGACTTCAGGGGC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp CAGGTTCCTTATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGGTAATCCAAAATATTTaGATCCACAGGGGGCATCTC +
Preference number: 4 (lower is better)
Translates to: QVPYQLVLGAGWAVFPMVVIQNI*IHRGHL
Trigger: GAGATGCCCCCTGTGGATCCAAATATTTTGGATTAC...CACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATAAGGAACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CCA 90 bp GCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGATGTTGGCCTTTCTATCGTATaGTCATGTGTGGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: AGLRGWLGCFSNGAGMDVGLSIV*SCVDSS
Trigger: AGAAGAATCCACACATGACCATACGATAGAAAGGCC...AACATCCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CCA 90 bp CTCATAGTCACTGTCTCCTCCATATTCACCCAAGAGGCCGATCAGTGGGTTTACGTTCTGAAAGTCTGCTaGAGACTCATGTTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LIVTVSSIFTQEADQWVYVLKVC*RLMFKG
Trigger: GCCTTTGAACATGAGTCTCCAGCAGACTTTCAGAAC...GTAAACCCACTGATCGGCCTCTTGGGTGAATATGGAGGAGACAGTGACTATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp CTTGCTTGGCCTCTGTCACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCAAACATCTGGCTTCCTaGCAGCCTATGATCCACATC +
Preference number: 4 (lower is better)
Translates to: LAWPLSLLLGSCRMNRKIKHLAS*QPMIHI
Trigger: GATGTGGATCATAGGCTGCCAGGAAGCCAGATGTTT...GATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGTGACAGAGGCCAAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CCA 90 bp ACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCGGTGCCCACCAATGTTTGGGTTTCTCCTCACTTaGGCCGGTCCTATAATCTTG +
Preference number: 4 (lower is better)
Translates to: TSLGFLQNEQEDRCPPMFGFLLT*AGPIIL
Trigger: CAAGATTATAGGACCGGCCCAAGTGAGGAGAAACCC...AAACATTGGTGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CCA 90 bp CATAGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTCATGTCTTAGGGGCTGGTTaGGCTGTTTTTCCAATGGTG +
Preference number: 4 (lower is better)
Translates to: HRLLAGYWGHNKFLPRGHVLGAG*AVFPMV
Trigger: CACCATTGGAAAAACAGCCCAACCAGCCCCTAAGAC...ATGACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCCTAAGCGTGACTCTTaGCCTTCTTCCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLPKRDS*PSSLFL
Trigger: CAGGAAGAGGGAAGAAGGCCAAGAGTCACGCTTAGG...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTCATAATCCTAAGCGTGACTCTTaGCCTTCTTCCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: RLLAGYWGHNKFLPRGHNPKRDS*PSSLFL
Trigger: CAGGAAGAGGGAAGAAGGCCAAGAGTCACGCTTAGG...ATTATGACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCCTAAGCGTGACTCTTaGCCTTCTTCCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFPKRDS*PSSLFL
Trigger: CAGGAAGAGGGAAGAAGGCCAAGAGTCACGCTTAGG...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGTCTCTTCGGAAAGTTaGCCCTTCCCTTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLVSSES*PFPSRR
Trigger: CCTTCTCGAAGGGAAGGGCCAACTTTCCGAAGAGAC...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGTCTCTTCGGAAAGTTaGCCCTTCCCTTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPVSSES*PFPSRR
Trigger: CCTTCTCGAAGGGAAGGGCCAACTTTCCGAAGAGAC...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp CTGTCCACTTTTTCAAGAGCAACACTGTTCTTACCTGTATTGCCACAAGGCACTGTCTCTTCGGAAAGTTaGCCCTTCCCTTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LSTFSRATLFLPVLPQGTVSSES*PFPSRR
Trigger: CCTTCTCGAAGGGAAGGGCCAACTTTCCGAAGAGAC...AGTGCCTTGTGGCAATACAGGTAAGAACAGTGTTGCTCTTGAAAAAGTGGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGCTCTCTCCATCCTaGCGTGTCTCTCCAGACCAT +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPLLSPS*RVSPDH
Trigger: ATGGTCTGGAGAGACACGCCAGGATGGAGAGAGCAA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAAGACTGGTTGCTCTCTCCATCCTaGCGTGTCTCTCCAGACCAT +
Preference number: 4 (lower is better)
Translates to: SVSLEYLIRFLSGESKDWLLSPS*RVSPDH
Trigger: ATGGTCTGGAGAGACACGCCAGGATGGAGAGAGCAA...CCAGTCTTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTGCTCTCTCCATCCTaGCGTGTCTCTCCAGACCAT +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLLLSPS*RVSPDH
Trigger: ATGGTCTGGAGAGACACGCCAGGATGGAGAGAGCAA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TGCTTGTGCAGGTCTGACAGCTGCTGGTGTTTGATCAGAACTTCTTTATTGGGACGAAGAGCTTCCGCATaGGAGTCGAGGTCAATAAAG +
Preference number: 4 (lower is better)
Translates to: CLCRSDSCWCLIRTSLLGRRASA*ESRSIK
Trigger: CTTTATTGACCTCGACTCCCATGCGGAAGCTCTTCG...TCCCAATAAAGAAGTTCTGATCAAACACCAGCAGCTGTCAGACCTGCACAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGGGCCTTCCCTTCACTaGCATTTTCCTGAAACCTCG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFGPSLH*HFPETS
Trigger: CGAGGTTTCAGGAAAATGCCAGTGAAGGGAAGGCCC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAAGACTGGGGGCCTTCCCTTCACTaGCATTTTCCTGAAACCTCG +
Preference number: 4 (lower is better)
Translates to: SVSLEYLIRFLSGESKDWGPSLH*HFPETS
Trigger: CGAGGTTTCAGGAAAATGCCAGTGAAGGGAAGGCCC...CCAGTCTTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGGGCCTTCCCTTCACTaGCATTTTCCTGAAACCTCG +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLGPSLH*HFPETS
Trigger: CGAGGTTTCAGGAAAATGCCAGTGAAGGGAAGGCCC...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp CCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGGTGTTTACCACTTTAGGTaGAGGGGGACTCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: PAQTVLSSGGFPGFACAGVYHFR*RGTLFL
Trigger: AAGGAAGAGAGTCCCCCTCCACCTAAAGTGGTAAAC...ACCTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGAAGCCAATCCAGGATaGCCATATCCCAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLEANPG*PYPRPV
Trigger: GACAGGCCTGGGATATGGCCATCCTGGATTGGCTTC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGAAGCCAATCCAGGATaGCCATATCCCAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSEANPG*PYPRPV
Trigger: GACAGGCCTGGGATATGGCCATCCTGGATTGGCTTC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TCACTGTCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAAGAAGCCAATCCAGGATaGCCATATCCCAGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: SLSVSLEYLIRFLSGESKEANPG*PYPRPV
Trigger: GACAGGCCTGGGATATGGCCATCCTGGATTGGCTTC...TTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGACAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GTTGTCCTTGTCGATTTGTATCTGAAGACCAGTCTGAATTTCTGCCACCTCCCCAACCAGACACACGCATaGGAGTCGAGGTCAATAAAG +
Preference number: 4 (lower is better)
Translates to: VVLVDLYLKTSLNFCHLPNQTHA*ESRSIK
Trigger: CTTTATTGACCTCGACTCCCATGCGTGTGTCTGGTT...GGGGAGGTGGCAGAAATTCAGACTGGTCTTCAGATACAAATCGACAAGGACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR TCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGAGCATCCCTACCTCTaGAGTCAACAGCGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSEHPYL*SQQREH
Trigger: ATGCTCACGCTGTTGACTTCAGAGGTAGGGATGCTC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp TCTTGCTTGGCCTCTGTCACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATTCTACCTCTGAAATCTaGATGTGGCGTATCCCTGTC +
Preference number: 4 (lower is better)
Translates to: SCLASVTSLGFLQNEQEDSTSEI*MWRIPV
Trigger: GACAGGGATACGCCACATTCAGATTTCAGAGGTAGA...ATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGTGACAGAGGCCAAGCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR TCA 90 bp GTAATCCAGGATCCTGGGGCACATAGACTTCTTGCTGCGATACAGTTGGAAACAATCGGTGTCTACCTCTaGAATCTGAATGTGGCGTAT +
Preference number: 4 (lower is better)
Translates to: VIQDPGAHRLLAAIQLETIGVYL*NLNVAY
Trigger: ATACGCCACATTCAGATTTCAGAGGTAGACACCGAT...TGTTTCCAACTGTATCGCAGCAAGAAGTCTATGTGCCCCAGGATCCTGGATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR TCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCTGCCCCTAAAATCCTaGTCAGTCCTAGATCGGTGT +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLLPLKS*SVLDRC
Trigger: ACACCGATCTAGGACTGATCAGGATTTTAGGGGCAG...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGATGTTTCCTTCTCTTGTTTCTaGATGCTCAAATTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: AGLRGWLGCFSNGAGMDVSFSCF*MLKFSL
Trigger: AAGGGAGAATTTGAGCATTCAGAAACAAGAGAAGGA...AACATCCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR TCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGGACTTTGGCTGTTCTaGAAGTCTGCTGGAGACTCA +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPGLWLF*KSAGDS
Trigger: TGAGTCTCCAGCAGACTTTCAGAACAGCCAAAGTCC...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGGACTTTGGCTGTTCTaGAAGTCTGCTGGAGACTCA +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLGLWLF*KSAGDS
Trigger: TGAGTCTCCAGCAGACTTTCAGAACAGCCAAAGTCC...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGTCACTTCTCTTGGGTACGTCCAGAAAGCTGTaGCTTATCTTGGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: EAEGRLLILAWPLSLLLGTSRKL*LILVLN
Trigger: GTTCAAGACCAAGATAAGTCACAGCTTTCTGGACGT...ACCCAAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR TCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTAAACAGACCAGCATCTaGACTCTGCTCTTCACGTCC +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLKQTSI*TLLFTS
Trigger: GGACGTGAAGAGCAGAGTTCAGATGCTGGTCTGTTT...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGGTCTGACAGCCCAAAAATCCAGGCTTaGTACATACTCCAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: DCFIFRWISRFCLCRSDSPKIQA*YILQGN
Trigger: GTTACCCTGGAGTATGTATCAAGCCTGGATTTTTGG...GCTGTCAGACCTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434592.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTGGGTTCTTGCAGAATaGACAGGAAGATCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLWVLAE*TGRSVP
Trigger: GGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GCAAAGCAGACAAGCCAGTTTATTCCAGTCAGTGAGTTTGTCTTCTTCATTCTCTGGGTTCTTGCAGAATaGACAGGAAGATCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: AKQTSQFIPVSEFVFFILWVLAE*TGRSVP
Trigger: GGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCA...GAGAATGAAGAAGACAAACTCACTGACTGGAATAAACTGGCTTGTCTGCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTGGGTTCTTGCAGAATaGACAGGAAGATCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSWVLAE*TGRSVP
Trigger: GGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp CATAGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTCATTTCCTTCTTGCTACTTaGCTTTCCTTGACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: HRLLAGYWGHNKFLPRGHFLLAT*LSLTGG
Trigger: CCCACCAGTCAAGGAAAGTCAAGTAGCAAGAAGGAA...ATGACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR TCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCACTGGCATTTTCCTaGAACCTCGTCACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPSLAFS*NLVTPL
Trigger: CAGAGGAGTGACGAGGTTTCAGGAAAATGCCAGTGA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTCACTGGCATTTTCCTaGAACCTCGTCACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFSLAFS*NLVTPL
Trigger: CAGAGGAGTGACGAGGTTTCAGGAAAATGCCAGTGA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp CTGTCCACTTTTTCAAGAGCAACACTGTTCTTACCTGTATTGCCACAAGGCACTTCACTGGCATTTTCCTaGAACCTCGTCACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: LSTFSRATLFLPVLPQGTSLAFS*NLVTPL
Trigger: CAGAGGAGTGACGAGGTTTCAGGAAAATGCCAGTGA...AGTGCCTTGTGGCAATACAGGTAAGAACAGTGTTGCTCTTGAAAAAGTGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR TCA 90 bp CTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTAGTGTCGATATCTGTTTATTCCAGTCAGTaGGTTTGTCTTCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: LQPVACWTQPPLLLVSISVYSSQ*VCLLHS
Trigger: AGAATGAAGAAGACAAACTCACTGACTGGAATAAAC...AGATATCGACACTAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGCTTGTGCAGGTCTaGCAGCTGCTGGTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPLLVQV*QLLVFD
Trigger: ATCAAACACCAGCAGCTGTCAGACCTGCACAAGCAA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTGCTTGTGCAGGTCTaGCAGCTGCTGGTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLLLVQV*QLLVFD
Trigger: ATCAAACACCAGCAGCTGTCAGACCTGCACAAGCAA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp CTAGTGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGTTTGCTGGTTCTTCCTaGGGCTCCAACACTGGGGCC +
Preference number: 4 (lower is better)
Translates to: LVSISSLSTSLRSLSVSLFAGSS*GSNTGA
Trigger: GGCCCCAGTGTTGGAGCCTCAGGAAGAACCAGCAAA...CAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR TCA 90 bp CTCATAGTCACTGTCTCCTCCATATTCACCCAAGAGGCCGATCAGTGGGTTTACTATATCGAGCAAACATaGCTCTTCGAACAGCATCTC +
Preference number: 4 (lower is better)
Translates to: LIVTVSSIFTQEADQWVYYIEQT*LFEQHL
Trigger: GAGATGCTGTTCGAAGAGTCATGTTTGCTCGATATA...GTAAACCCACTGATCGGCCTCTTGGGTGAATATGGAGGAGACAGTGACTATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCTCTGCCAGGAAAGTTaGCAGAGTGTCTCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFLCQES*QSVSLE
Trigger: CTCAAGAGAGACACTCTGGCAACTTTCCTGGCAGAG...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCAAAGGAGGCCCCGAATaGCCCTGGAAATCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLKGGPE*PWKSKG
Trigger: TCCCTTTGATTTCCAGGGGCATTCGGGGCCTCCTTT...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCCAGCATCTGAACTCTaGTCTTCACGTCCAGAAAGC +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLPASEL*SSRPES
Trigger: GCTTTCTGGACGTGAAGAGCAGAGTTCAGATGCTGG...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCATCTCGGGCAGTTTTaGCCTCTGGAAAAGACTTGC +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFHLGQF*PLEKTC
Trigger: GCAAGTCTTTTCCAGAGGGCAAAACTGCCCGAGATG...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AGCTCCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGTTCTTTACAGGCATaGCATCAGGAGTCCGAAAAG +
Preference number: 4 (lower is better)
Translates to: SSCSDCFIFRWISRFCLCSSLQA*HQESEK
Trigger: CTTTTCGGACTCCTGATGGCATGCCTGTAAAGAACT...GCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000434592.5
ENST00000454079.5
CDS-3UTR GCA 90 bp ATCACGGTCATCCCTGTCTATGATGGAACCGTATCTTCCACTACGCTCTGTTCTGTGCCCACCAATGTTTaGCTTACATCGTTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: ITVIPVYDGTVSSTTLCSVPTNV*LTSFAV
Trigger: TACTGCAAACGATGTAAGGCAAACATTGGTGGGCAC...AGAACAGAGCGTAGTGGAAGATACGGTTCCATCATAGACAGGGATGACCGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR GCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCTTAAAGACGTCTTCTaGAGGGGCCTTCCCTTCACT +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLLKDVF*RGLPFT
Trigger: AGTGAAGGGAAGGCCCCTGCAGAAGACGTCTTTAAG...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCTTAAAGACGTCTTCTaGAGGGGCCTTCCCTTCACT +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFLKDVF*RGLPFT
Trigger: AGTGAAGGGAAGGCCCCTGCAGAAGACGTCTTTAAG...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTCTTAAAGACGTCTTCTaGAGGGGCCTTCCCTTCACT +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPLKDVF*RGLPFT
Trigger: AGTGAAGGGAAGGCCCCTGCAGAAGACGTCTTTAAG...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp CATAGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTCATTGCAGGTCTGACAGCTaGTGGTGTTTGATCAGAACT +
Preference number: 4 (lower is better)
Translates to: HRLLAGYWGHNKFLPRGHCRSDS*WCLIRT
Trigger: AGTTCTGATCAAACACCAGCAGCTGTCAGACCTGCA...ATGACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR GCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTCCAGGTTTTGCTTGTaGAGGTCTGACAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSSRFCL*RSDSCW
Trigger: CCAGCAGCTGTCAGACCTGCACAAGCAAAACCTGGA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCGTTGGACTGTCTTTTaGTGGTTCTTCCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFRWTVF*WFFLRL
Trigger: GAGCCTCAGGAAGAACCAGCAAAAGACAGTCCAACG...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTCGTTGGACTGTCTTTTaGTGGTTCTTCCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPRWTVF*WFFLRL
Trigger: GAGCCTCAGGAAGAACCAGCAAAAGACAGTCCAACG...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp TCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAAGACTGGCGTTGGACTGTCTTTTaGTGGTTCTTCCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SVSLEYLIRFLSGESKDWRWTVF*WFFLRL
Trigger: GAGCCTCAGGAAGAACCAGCAAAAGACAGTCCAACG...CCAGTCTTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGGCCCCGAATGCCCCTaGAAATCAAAGGGAAGTGAA +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSGPECP*KSKGSE
Trigger: TTCACTTCCCTTTGATTTCCAGGGGCATTCGGGGCC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCCCCTAAAATCTGCATaGGATCCATCCCGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLPLKSA*DPSRPL
Trigger: TAGAGGCCGGGATGGATCCCATGCAGATTTTAGGGG...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAACAGCATCTCGGTAAGTCTCGTTGGACTGTCTTTTGCTGGTTCTTCCTGAGGTCGTATGGTCATGTGTaGATTCTTCTCTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: EQHLGKSRWTVFCWFFLRSYGHV*ILLSCS
Trigger: TGAACAGGAGAGAAGAATCCACACATGACCATACGA...CCTCAGGAAGAACCAGCAAAAGACAGTCCAACGAGACTTACCGAGATGCTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGGGTTTCTCCTCACTTaGGCCGGTCCTATAATCTTG +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPGFLLT*AGPIIL
Trigger: CAAGATTATAGGACCGGCCCAAGTGAGGAGAAACCC...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAAGACTGGGGGTTTCTCCTCACTTaGGCCGGTCCTATAATCTTG +
Preference number: 4 (lower is better)
Translates to: SVSLEYLIRFLSGESKDWGFLLT*AGPIIL
Trigger: CAAGATTATAGGACCGGCCCAAGTGAGGAGAAACCC...CCAGTCTTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTTAGAGTTCCCTGGTTaGCCTCCATGCATCCGATGG +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLLEFPG*PPCIRW
Trigger: CCATCGGATGCATGGAGGCCAACCAGGGAACTCTAA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTATCATTAGAGTTCCCTaGTTGGCCTCCATGCATCCG +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLIIRVP*LASMHP
Trigger: CGGATGCATGGAGGCCAACCAGGGAACTCTAATGAT...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTATCATTAGAGTTCCCTaGTTGGCCTCCATGCATCCG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFIIRVP*LASMHP
Trigger: CGGATGCATGGAGGCCAACCAGGGAACTCTAATGAT...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp CTGTCCACTTTTTCAAGAGCAACACTGTTCTTACCTGTATTGCCACAAGGCACTATCATTAGAGTTCCCTaGTTGGCCTCCATGCATCCG +
Preference number: 4 (lower is better)
Translates to: LSTFSRATLFLPVLPQGTIIRVP*LASMHP
Trigger: CGGATGCATGGAGGCCAACCAGGGAACTCTAATGAT...AGTGCCTTGTGGCAATACAGGTAAGAACAGTGTTGCTCTTGAAAAAGTGGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp CCTTATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATTTTTCCAATGGTGCTaGTATGGATGTTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: PYQLVLGAGWAVFPMVLVFFQWC*YGCFLR
Trigger: CCTCAGAAAACATCCATACCAGCACCATTGGAAAAA...TACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000425608.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGTCTTAGGGGCTGGTTaGGCTGTTTTTCCAATGGTG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFVLGAG*AVFPMV
Trigger: CACCATTGGAAAAACAGCCCAACCAGCCCCTAAGAC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGTCTTAGGGGCTGGTTaGGCTGTTTTTCCAATGGTG +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPVLGAG*AVFPMV
Trigger: CACCATTGGAAAAACAGCCCAACCAGCCCCTAAGAC...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGCTGGTCTTAGGGGCTaGTTGGGCTGTTTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFAGLRG*LGCFSN
Trigger: ATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCCTAAGCGTGACTCTTaGCCTTCTTCCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLPKRDS*PSSLFL
Trigger: CAGGAAGAGGGAAGAAGGCCAAGAGTCACGCTTAGG...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTAAGCGTGACTCTTaGCCTTCTTCCCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSPKRDS*PSSLFL
Trigger: CAGGAAGAGGGAAGAAGGCCAAGAGTCACGCTTAGG...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGTCTCTTCGGAAAGTTaGCCCTTCCCTTCGAGAAGG +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSVSSES*PFPSRR
Trigger: CCTTCTCGAAGGGAAGGGCCAACTTTCCGAAGAGAC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GACACAGCCTCCTTTGCTGCTAGTGTCGATATCTTCTTTATCAACAAGTTTACGTTGCTCTCTCCATCCTaGCGTGTCTCTCCAGACCAT +
Preference number: 4 (lower is better)
Translates to: DTASFAASVDIFFINKFTLLSPS*RVSPDH
Trigger: ATGGTCTGGAGAGACACGCCAGGATGGAGAGAGCAA...CGTAAACTTGTTGATAAAGAAGATATCGACACTAGCAGCAAAGGAGGCTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTTGCTCTCTCCATCCTaGCGTGTCTCTCCAGACCAT +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSLLSPS*RVSPDH
Trigger: ATGGTCTGGAGAGACACGCCAGGATGGAGAGAGCAA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AGCTCCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCTCACCTCAGGTGGTGTaGAACGATAGATACGCTTTA +
Preference number: 4 (lower is better)
Translates to: SSCSDCFIFRWISRFCLCSPQVV*NDRYAL
Trigger: TAAAGCGTATCTATCGTTCCACACCACCTGAGGTGA...GCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CCA 90 bp ATCACGGTCATCCCTGTCTATGATGGAACCGTATCTTCCACTACGCTCTGTTCTTCACCTCAGGTGGTGTaGAACGATAGATACGCTTTA +
Preference number: 4 (lower is better)
Translates to: ITVIPVYDGTVSSTTLCSSPQVV*NDRYAL
Trigger: TAAAGCGTATCTATCGTTCCACACCACCTGAGGTGA...AGAACAGAGCGTAGTGGAAGATACGGTTCCATCATAGACAGGGATGACCGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCGAAGAGCTTCCGCATaGGAGTCGAGGTCAATAAAG +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLRRASA*ESRSIK
Trigger: CTTTATTGACCTCGACTCCCATGCGGAAGCTCTTCG...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCGAAGAGCTTCCGCATaGGAGTCGAGGTCAATAAAG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFRRASA*ESRSIK
Trigger: CTTTATTGACCTCGACTCCCATGCGGAAGCTCTTCG...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGGGCCTTCCCTTCACTaGCATTTTCCTGAAACCTCG +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLGPSLH*HFPETS
Trigger: CGAGGTTTCAGGAAAATGCCAGTGAAGGGAAGGCCC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCAAGAGGCCGATCAGTaGGTTTACCACTTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFQEADQ*VYHFRW
Trigger: CCACCTAAAGTGGTAAACCCACTGATCGGCCTCTTG...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGGTAACTTCTTTGTCCTaGATCATTAGAGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: YQLVLGAGWAVFPMVLVWVTSLS*IIRVPC
Trigger: ACAGGGAACTCTAATGATCCAGGACAAAGAAGTTAC...CCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
3UTR CAA 72 bp TTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTaGCTGCTAGTGTCGATATCTTCTTTATCAACAAGT +
Preference number: 4 (lower is better)
Translates to: FLQPVACWTQPP*LLVSISSLSTS
Trigger: ACTTGTTGATAAAGAAGATATCGACACTAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AGCTCCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCGAAATCAAAGGGAAGTaGATCTCTGCCAGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: SSCSDCFIFRWISRFCLCEIKGK*ISARKV
Trigger: AACTTTCCTGGCAGAGATTCACTTCCCTTTGATTTC...GCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR TCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCTACCTCTGAAATCTaGATGTGGCGTATCCCTGTC +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPSTSEI*MWRIPV
Trigger: GACAGGGATACGCCACATTCAGATTTCAGAGGTAGA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGCCCCTAAAATCCTaGTCAGTCCTAGATCGGTGT +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLLPLKS*SVLDRC
Trigger: ACACCGATCTAGGACTGATCAGGATTTTAGGGGCAG...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGGCATCTTCCAAGAGTaGAAACTCCACGCAGACATA +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFGIFQE*KLHADI
Trigger: TATGTCTGCGTGGAGTTTTCACTCTTGGAAGATGCC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GAATCATTTCTTCGTTTTCCAGTGGCCAGGTTTACAGCTACCATCTTCCCATCATTCCTTCTTGCTACTTaGCTTTCCTTGACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ESFLRFPVARFTATIFPSFLLAT*LSLTGG
Trigger: CCCACCAGTCAAGGAAAGTCAAGTAGCAAGAAGGAA...TGATGGGAAGATGGTAGCTGTAAACCTGGCCACTGGAAAACGAAGAAATGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR TCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTTCCTTCTTGCTACTTaGCTTTCCTTGACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFFLLAT*LSLTGG
Trigger: CCCACCAGTCAAGGAAAGTCAAGTAGCAAGAAGGAA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTCACTGGCATTTTCCTaGAACCTCGTCACTCCTCTG +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLSLAFS*NLVTPL
Trigger: CAGAGGAGTGACGAGGTTTCAGGAAAATGCCAGTGA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GCACATAGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTACAGCTGCTGGTGTTTaGTCAGAACTTCTTTATTGG +
Preference number: 4 (lower is better)
Translates to: AHRLLAGYWGHNKFLPRGTAAGV*SELLYW
Trigger: CCAATAAAGAAGTTCTGATCAAACACCAGCAGCTGT...ACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCTATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR TCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTTGCTTGTGCAGGTCTaGCAGCTGCTGGTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLLLVQV*QLLVFD
Trigger: ATCAAACACCAGCAGCTGTCAGACCTGCACAAGCAA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTTGCTTGTGCAGGTCTaGCAGCTGCTGGTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSLLVQV*QLLVFD
Trigger: ATCAAACACCAGCAGCTGTCAGACCTGCACAAGCAA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GCAAAGCAGACAAGCCAGTTTATTCCAGTCAGTGAGTTTGTCTTCTTCATTCTCTTGCTTGTGCAGGTCTaGCAGCTGCTGGTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: AKQTSQFIPVSEFVFFILLLVQV*QLLVFD
Trigger: ATCAAACACCAGCAGCTGTCAGACCTGCACAAGCAA...GAGAATGAAGAAGACAAACTCACTGACTGGAATAAACTGGCTTGTCTGCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTCTGCCAGGAAAGTTaGCAGAGTGTCTCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLLCQES*QSVSLE
Trigger: CTCAAGAGAGACACTCTGGCAACTTTCCTGGCAGAG...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GACACAGCCTCCTTTGCTGCTAGTGTCGATATCTTCTTTATCAACAAGTTTACGCTCTGCCAGGAAAGTTaGCAGAGTGTCTCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: DTASFAASVDIFFINKFTLCQES*QSVSLE
Trigger: CTCAAGAGAGACACTCTGGCAACTTTCCTGGCAGAG...CGTAAACTTGTTGATAAAGAAGATATCGACACTAGCAGCAAAGGAGGCTGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTATGCTCCTCTACATTTaGAAAAGGAGGCCCCGAATG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFMLLYI*KRRPRM
Trigger: CATTCGGGGCCTCCTTTTGCAAATGTAGAGGAGCAT...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp TTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGTCACTTCTCATGCTCCTCTACATTTaGAAAAGGAGGCCCCGAATG +
Preference number: 4 (lower is better)
Translates to: FSEAEGRLLILAWPLSLLMLLYI*KRRPRM
Trigger: CATTCGGGGCCTCCTTTTGCAAATGTAGAGGAGCAT...GAGAAGTGACAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR GCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTATGCTCCTCTACATTTaGAAAAGGAGGCCCCGAATG +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLMLLYI*KRRPRM
Trigger: CATTCGGGGCCTCCTTTTGCAAATGTAGAGGAGCAT...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGTCACTTCTCTTGGGTGCTGTTCTGAAAGTCTaGTGGAGACTCATGTTCAAA +
Preference number: 4 (lower is better)
Translates to: EAEGRLLILAWPLSLLLGAVLKV*WRLMFK
Trigger: TTTGAACATGAGTCTCCAGCAGACTTTCAGAACAGC...ACCCAAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCCTCTGGAAAAGACTTaGTCTGGCCATAGCCAAACA +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFPLEKT*SGHSQT
Trigger: TGTTTGGCTATGGCCAGAGCAAGTCTTTTCCAGAGG...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTCATAATAGTAGCCAGTAGCAGTTCTTTACAGGCATaGCATCAGGAGTCCGAAAAG +
Preference number: 4 (lower is better)
Translates to: GIGVIISSCQGVIIVASSSSLQA*HQESEK
Trigger: CTTTTCGGACTCCTGATGGCATGCCTGTAAAGAACT...GCTACTGGCTACTATTATGACCCCTTGGCAGGAACTTATTATGACCCCAATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR GCA 90 bp CAGGTTCCTTATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGTTATACTCCTTCAACTaGAAGTTCTTTACAGGCATG +
Preference number: 4 (lower is better)
Translates to: QVPYQLVLGAGWAVFPMVLYSFN*KFFTGM
Trigger: CATGCCTGTAAAGAACTTGCAGTTGAAGGAGTATAA...CACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATAAGGAACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR GCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGAACAGGAAGATCGGTaGCCACCAATGTTTGCCTTA +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLEQEDR*PPMFAL
Trigger: TAAGGCAAACATTGGTGGGCACCGATCTTCCTGTTC...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTCATAATGAACAGGAAGATCGGTaGCCACCAATGTTTGCCTTA +
Preference number: 4 (lower is better)
Translates to: RLLAGYWGHNKFLPRGHNEQEDR*PPMFAL
Trigger: TAAGGCAAACATTGGTGGGCACCGATCTTCCTGTTC...ATTATGACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR GCA 90 bp GACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGGTCTGACAGCCTTCTCTTGGGTTCTTaGAGAATGAACAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: DCFIFRWISRFCLCRSDSLLLGS*RMNRKI
Trigger: GATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAG...GCTGTCAGACCTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR GCA 90 bp CCAGATAGGCTAGCTCCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTCTGTTTTTCCAATGGTaGTGGTATGGATGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: PDRLAPAQTVLSSGGFPGLFFQW*WYGCFL
Trigger: CAGAAAACATCCATACCAGCACCATTGGAAAAACAG...ACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGGAGCTAGCCTATCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGATGTTGTCATAATAAGTTCCTaGCAAGGGGTCATAATAGTA +
Preference number: 4 (lower is better)
Translates to: AGLRGWLGCFSNGAGMDVVIISS*QGVIIV
Trigger: TACTATTATGACCCCTTGGCAGGAACTTATTATGAC...AACATCCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419610.5
CDS-3UTR GCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTAAAGACGTCTTCTaGAGGGGCCTTCCCTTCACT +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLLKDVF*RGLPFT
Trigger: AGTGAAGGGAAGGCCCCTGCAGAAGACGTCTTTAAG...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp TTACGATCACTGTCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTGGGAAACTGCCTTCTaGAAAGCAGACAAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LRSLSVSLEYLIRFLSGEWETAF*KADKPV
Trigger: AACTGGCTTGTCTGCTTTGCAGAAGGCAGTTTCCCA...CTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGACAGTGATCGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGGGAAACTGCCTTCTaGAAAGCAGACAAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPWETAF*KADKPV
Trigger: AACTGGCTTGTCTGCTTTGCAGAAGGCAGTTTCCCA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGGGAAACTGCCTTCTaGAAAGCAGACAAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLWETAF*KADKPV
Trigger: AACTGGCTTGTCTGCTTTGCAGAAGGCAGTTTCCCA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GCATGTGGTCAGAATGGTCCCCAGAATCATTTCTTCGTTTTCCAGTGGCCAGGTTCTTTATTGGGAAACTaGCTTCTGCAAAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: ACGQNGPQNHFFVFQWPGSLLGN*LLQSRQ
Trigger: TTGTCTGCTTTGCAGAAGGCAGTTTCCCAATAAAGA...ACCTGGCCACTGGAAAACGAAGAAATGATTCTGGGGACCATTCTGACCACATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTGCAGGTCTGACAGCTaGTGGTGTTTGATCAGAACT +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFCRSDS*WCLIRT
Trigger: AGTTCTGATCAAACACCAGCAGCTGTCAGACCTGCA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp CTGGTATGGATGTTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTTGCAGGTCTGACAGCTaGTGGTGTTTGATCAGAACT +
Preference number: 4 (lower is better)
Translates to: LVWMFSEAEGRLLILAWPCRSDS*WCLIRT
Trigger: AGTTCTGATCAAACACCAGCAGCTGTCAGACCTGCA...AGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAACATCCATACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419610.5
CDS-3UTR GCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGCAGGTCTGACAGCTaGTGGTGTTTGATCAGAACT +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLCRSDS*WCLIRT
Trigger: AGTTCTGATCAAACACCAGCAGCTGTCAGACCTGCA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp CTGGTATGGATGTTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTTGGATTTCCAGGTTTTaGTTGTGCAGGTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: LVWMFSEAEGRLLILAWPWISRF*LCRSDS
Trigger: GCTGTCAGACCTGCACAAGCAAAACCTGGAAATCCA...AGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAACATCCATACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419610.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTGGATTTCCAGGTTTTaGTTGTGCAGGTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFWISRF*LCRSDS
Trigger: GCTGTCAGACCTGCACAAGCAAAACCTGGAAATCCA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGGATTTCCAGGTTTTaGTTGTGCAGGTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPWISRF*LCRSDS
Trigger: GCTGTCAGACCTGCACAAGCAAAACCTGGAAATCCA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGTTGGACTGTCTTTTaGTGGTTCTTCCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSRWTVF*WFFLRL
Trigger: GAGCCTCAGGAAGAACCAGCAAAAGACAGTCCAACG...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGTGCCCACCAATGTTTaGCTTACACGAAAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFVPTNV*LTRKGP
Trigger: TGGACCTTTTCGTGTAAGGCAAACATTGGTGGGCAC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419610.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGCAAACCTTTCTTCTTaGCTCCCACGAAAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFANLSS*LPRKGP
Trigger: TGGACCTTTTCGTGGGAGCCAAGAAGAAAGGTTTGC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266022.9
CDS-3UTR CCA 90 bp CCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGGTGGCCTTTCTATCGTATaGTCATGTGTGGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: PAQTVLSSGGFPGFACAGGLSIV*SCVDSS
Trigger: AGAAGAATCCACACATGACCATACGATAGAAAGGCC...ACCTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTAAACATCTGGCTTCCTaGCAGCCTATGATCCACATC +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPKHLAS*QPMIHI
Trigger: GATGTGGATCATAGGCTGCCAGGAAGCCAGATGTTT...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGGGTTTCTCCTCACTTaGGCCGGTCCTATAATCTTG +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLGFLLT*AGPIIL
Trigger: CAAGATTATAGGACCGGCCCAAGTGAGGAGAAACCC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCCTCCATGCATCCGATaGCATCTTCCAAGAGTGAAA +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFPPCIR*HLPRVK
Trigger: TTTCACTCTTGGAAGATGCCATCGGATGCATGGAGG...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCCTCCATGCATCCGATaGCATCTTCCAAGAGTGAAA +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLPPCIR*HLPRVK
Trigger: TTTCACTCTTGGAAGATGCCATCGGATGCATGGAGG...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp CTCATAGTCACTGTCTCCTCCATATTCACCCAAGAGGCCGATCAGTGGGTTTACTTTTTCCAATGGTGCTaGTATGGATGTTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: LIVTVSSIFTQEADQWVYFFQWC*YGCFLR
Trigger: CCTCAGAAAACATCCATACCAGCACCATTGGAAAAA...GTAAACCCACTGATCGGCCTCTTGGGTGAATATGGAGGAGACAGTGACTATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CCA 90 bp CTTGCTTGGCCTCTGTCACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCGGGCTGTTTTTCCAATaGTGCTGGTATGGATGTTTT +
Preference number: 4 (lower is better)
Translates to: LAWPLSLLLGSCRMNRKIGLFFQ*CWYGCF
Trigger: AAAACATCCATACCAGCACCATTGGAAAAACAGCCC...GATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGTGACAGAGGCCAAGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CCA 90 bp GCACATAGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTGGGCTGTTTTTCCAATaGTGCTGGTATGGATGTTTT +
Preference number: 4 (lower is better)
Translates to: AHRLLAGYWGHNKFLPRGGLFFQ*CWYGCF
Trigger: AAAACATCCATACCAGCACCATTGGAAAAACAGCCC...ACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCTATGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGTCTTAGGGGCTGGTTaGGCTGTTTTTCCAATGGTG +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLVLGAG*AVFPMV
Trigger: CACCATTGGAAAAACAGCCCAACCAGCCCCTAAGAC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGTCTTAGGGGCTGGTTaGGCTGTTTTTCCAATGGTG +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSVLGAG*AVFPMV
Trigger: CACCATTGGAAAAACAGCCCAACCAGCCCCTAAGAC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp ATGTTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGTCACTTGTCTTAGGGGCTGGTTaGGCTGTTTTTCCAATGGTG +
Preference number: 4 (lower is better)
Translates to: MFSEAEGRLLILAWPLSLVLGAG*AVFPMV
Trigger: CACCATTGGAAAAACAGCCCAACCAGCCCCTAAGAC...AAGTGACAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGCTGGTCTTAGGGGCTaGTTGGGCTGTTTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSAGLRG*LGCFSN
Trigger: ATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GCAAAGCAGACAAGCCAGTTTATTCCAGTCAGTGAGTTTGTCTTCTTCATTCTCGCTGGTCTTAGGGGCTaGTTGGGCTGTTTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: AKQTSQFIPVSEFVFFILAGLRG*LGCFSN
Trigger: ATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGC...GAGAATGAAGAAGACAAACTCACTGACTGGAATAAACTGGCTTGTCTGCTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGCTGGTCTTAGGGGCTaGTTGGGCTGTTTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLAGLRG*LGCFSN
Trigger: ATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAACAAGTAAGTCTACAGAATGTTTCAGTTTCCCAGCAATTCCAGGTCTAAGGTTGCTCTCTCCATCCTaGCGTGTCTCTCCAGACCAT +
Preference number: 4 (lower is better)
Translates to: ETSKSTECFSFPAIPGLRLLSPS*RVSPDH
Trigger: ATGGTCTGGAGAGACACGCCAGGATGGAGAGAGCAA...CCTTAGACCTGGAATTGCTGGGAAACTGAAACATTCTGTAGACTTACTTGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp GTATCTGAAGACCAGTCTGAATTTCTGCCACCTCCCCTCCTATCTCGGAAATATTTCTTCGTTTTCCAGTaGCCAGGTTTACAGCTACCA +
Preference number: 4 (lower is better)
Translates to: VSEDQSEFLPPPLLSRKYFFVFQ*PGLQLP
Trigger: TGGTAGCTGTAAACCTGGCCACTGGAAAACGAAGAA...ATATTTCCGAGATAGGAGGGGAGGTGGCAGAAATTCAGACTGGTCTTCAGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR CCA 90 bp CTGGGGCACATAGACTTCTTGCTGCGATACAGTTGGAAACAAGTAAGTCTACAGTTCTTCGTTTTCCAGTaGCCAGGTTTACAGCTACCA +
Preference number: 4 (lower is better)
Translates to: LGHIDFLLRYSWKQVSLQFFVFQ*PGLQLP
Trigger: TGGTAGCTGTAAACCTGGCCACTGGAAAACGAAGAA...CTGTAGACTTACTTGTTTCCAACTGTATCGCAGCAAGAAGTCTATGTGCCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGTTTACCACTTTAGGTaGAGGGGGACTCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFVYHFR*RGTLFL
Trigger: AAGGAAGAGAGTCCCCCTCCACCTAAAGTGGTAAAC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGTTTACCACTTTAGGTaGAGGGGGACTCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLVYHFR*RGTLFL
Trigger: AAGGAAGAGAGTCCCCCTCCACCTAAAGTGGTAAAC...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GACACAGCCTCCTTTGCTGCTAGTGTCGATATCTTCTTTATCAACAAGTTTACGCAAGAGGCCGATCAGTaGGTTTACCACTTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: DTASFAASVDIFFINKFTQEADQ*VYHFRW
Trigger: CCACCTAAAGTGGTAAACCCACTGATCGGCCTCTTG...CGTAAACTTGTTGATAAAGAAGATATCGACACTAGCAGCAAAGGAGGCTGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCAAGAGGCCGATCAGTaGGTTTACCACTTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLQEADQ*VYHFRW
Trigger: CCACCTAAAGTGGTAAACCCACTGATCGGCCTCTTG...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCAAGAGGCCGATCAGTaGGTTTACCACTTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSQEADQ*VYHFRW
Trigger: CCACCTAAAGTGGTAAACCCACTGATCGGCCTCTTG...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GGGCCTTCGAAGGACTCCATCATTTCTCGAATATCGCTCTCTGTGATGGTGATGTGTTTTATCTTCCGGTaGATTTCCAGGTTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: GPSKDSIISRISLSVMVMCFIFR*ISRFCL
Trigger: CAAGCAAAACCTGGAAATCCACCGGAAGATAAAACA...CATCACCATCACAGAGAGCGATATTCGAGAAATGATGGAGTCCTTCGAAGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGGAGAGTCAAAAGACTaGAGCTTTTCCCTGCGATCA +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLGESKD*SFSLRS
Trigger: TGATCGCAGGGAAAAGCTCCAGTCTTTTGACTCTCC...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TTTCTGGAGAGTCAAAAGACTGGAGCTTTTCCCTGCGATCATTTCCTCTTCCTTGGAGAGTCAAAAGACTaGAGCTTTTCCCTGCGATCA +
Preference number: 4 (lower is better)
Translates to: FLESQKTGAFPCDHFLFLGESKD*SFSLRS
Trigger: TGATCGCAGGGAAAAGCTCCAGTCTTTTGACTCTCC...AAGGAAGAGGAAATGATCGCAGGGAAAAGCTCCAGTCTTTTGACTCTCCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGGAGAGTCAAAAGACTaGAGCTTTTCCCTGCGATCA +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFGESKD*SFSLRS
Trigger: TGATCGCAGGGAAAAGCTCCAGTCTTTTGACTCTCC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGGACTGTCTTTTGCTaGTTCTTCCTGAGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPWTVFC*FFLRLQ
Trigger: TTGGAGCCTCAGGAAGAACCAGCAAAAGACAGTCCA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GTATGGATGTTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGTGGACTGTCTTTTGCTaGTTCTTCCTGAGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: VWMFSEAEGRLLILAWPLWTVFC*FFLRLQ
Trigger: TTGGAGCCTCAGGAAGAACCAGCAAAAGACAGTCCA...CAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAACATCCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419610.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTGGACTGTCTTTTGCTaGTTCTTCCTGAGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFWTVFC*FFLRLQ
Trigger: TTGGAGCCTCAGGAAGAACCAGCAAAAGACAGTCCA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp CCCACTCCAGGGACCAGGACACATTCAGACCACCCACTGTCCACTTTTTCAAGATATTTTAAGACGAAGTaGCGGAGTAAACTTTTATGC +
Preference number: 4 (lower is better)
Translates to: PTPGTRTHSDHPLSTFSRYFKTK*RSKLLC
Trigger: GCATAAAAGTTTACTCCGCCACTTCGTCTTAAAATA...TCTTGAAAAAGTGGACAGTGGGTGGTCTGAATGTGTCCTGGTCCCTGGAGTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR TCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGTATGTCCCTACCCCTaGAGTCCAACTGTGATGAAT +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLVCPYP*SPTVMN
Trigger: ATTCATCACAGTTGGACTTCAGGGGTAGGGACATAC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTCTACCTCTGAAATCTaGATGTGGCGTATCCCTGTC +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSSTSEI*MWRIPV
Trigger: GACAGGGATACGCCACATTCAGATTTCAGAGGTAGA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTATCGGTGTCTACCTCTaGAATCTGAATGTGGCGTAT +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFIGVYL*NLNVAY
Trigger: ATACGCCACATTCAGATTTCAGAGGTAGACACCGAT...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTCAAATTCTCCCTTCTaGATGCCAAAAGCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFSNSPF*MPKAGL
Trigger: AAGGCCTGCTTTTGGCATTCAGAAGGGAGAATTTGA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGACTTATCTTGGTCTTaGACTGGACTTTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPDLSWS*TGLWLF
Trigger: GAACAGCCAAAGTCCAGTTCAAGACCAAGATAAGTC...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTACGTCCAGAAAGCTGTaGCTTATCTTGGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPTSRKL*LILVLN
Trigger: GTTCAAGACCAAGATAAGTCACAGCTTTCTGGACGT...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTACGTCCAGAAAGCTGTaGCTTATCTTGGTCTTGAAC +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFTSRKL*LILVLN
Trigger: GTTCAAGACCAAGATAAGTCACAGCTTTCTGGACGT...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGGCATCTTCCAAGAGTaGAAACTCCACGCAGACATA +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSGIFQE*KLHADI
Trigger: TATGTCTGCGTGGAGTTTTCACTCTTGGAAGATGCC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCCAAAAATCCAGGCTTaGTACATACTCCAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLPKIQA*YILQGN
Trigger: GTTACCCTGGAGTATGTATCAAGCCTGGATTTTTGG...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTCCAAAAATCCAGGCTTaGTACATACTCCAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPPKIQA*YILQGN
Trigger: GTTACCCTGGAGTATGTATCAAGCCTGGATTTTTGG...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCCAAAAATCCAGGCTTaGTACATACTCCAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFPKIQA*YILQGN
Trigger: GTTACCCTGGAGTATGTATCAAGCCTGGATTTTTGG...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp TTTCTGGAGAGTCAAAAGACTGGAGCTTTTCCCTGCGATCATTTCCTCTTCCTTCCAAAAATCCAGGCTTaGTACATACTCCAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: FLESQKTGAFPCDHFLFLPKIQA*YILQGN
Trigger: GTTACCCTGGAGTATGTATCAAGCCTGGATTTTTGG...AAGGAAGAGGAAATGATCGCAGGGAAAAGCTCCAGTCTTTTGACTCTCCAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000434592.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTTCCTTCTTGCTACTTaGCTTTCCTTGACTGGTGGG +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLFLLAT*LSLTGG
Trigger: CCCACCAGTCAAGGAAAGTCAAGTAGCAAGAAGGAA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp CATAGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTCATTATATCGAGCAAACATaGCTCTTCGAACAGCATCTC +
Preference number: 4 (lower is better)
Translates to: HRLLAGYWGHNKFLPRGHYIEQT*LFEQHL
Trigger: GAGATGCTGTTCGAAGAGTCATGTTTGCTCGATATA...ATGACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419610.5
CDS-3UTR GCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCAGGGAAGTGAATCTCTaGCAGGAAAGTTGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLREVNL*QESCQS
Trigger: ACTCTGGCAACTTTCCTGGCAGAGATTCACTTCCCT...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCATCACGGTACTCCATaGTTCTGTAATCGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLHHGTP*FCNRCL
Trigger: AAGACACCGATTACAGAAGCATGGAGTACCGTGATG...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GTATGGATGTTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGCATCACGGTACTCCATaGTTCTGTAATCGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: VWMFSEAEGRLLILAWPLHHGTP*FCNRCL
Trigger: AAGACACCGATTACAGAAGCATGGAGTACCGTGATG...CAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAACATCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCATCACGGTACTCCATaGTTCTGTAATCGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFHHGTP*FCNRCL
Trigger: AAGACACCGATTACAGAAGCATGGAGTACCGTGATG...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCCTCTGGAAAAGACTTaGTCTGGCCATAGCCAAACA +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLPLEKT*SGHSQT
Trigger: TGTTTGGCTATGGCCAGAGCAAGTCTTTTCCAGAGG...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTAGTTCTTTACAGGCATaGCATCAGGAGTCCGAAAAG +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLSSLQA*HQESEK
Trigger: CTTTTCGGACTCCTGATGGCATGCCTGTAAAGAACT...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTAGTTCTTTACAGGCATaGCATCAGGAGTCCGAAAAG +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPSSLQA*HQESEK
Trigger: CTTTTCGGACTCCTGATGGCATGCCTGTAAAGAACT...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GTATGGATGTTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGAGTTCTTTACAGGCATaGCATCAGGAGTCCGAAAAG +
Preference number: 4 (lower is better)
Translates to: VWMFSEAEGRLLILAWPLSSLQA*HQESEK
Trigger: CTTTTCGGACTCCTGATGGCATGCCTGTAAAGAACT...CAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAACATCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR GCA 90 bp TTGCTGCTAGTGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTCCTGGTTGGCCTCCATaGATCCGATGGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLLVSISSLSTSLRSLSVPGWPP*IRWHLP
Trigger: TGGAAGATGCCATCGGATGCATGGAGGCCAACCAGG...AACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACACTAGCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR GCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGTGCCCACCAATGTTTaGCTTACATCGTTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPVPTNV*LTSFAV
Trigger: TACTGCAAACGATGTAAGGCAAACATTGGTGGGCAC...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGTGCCCACCAATGTTTaGCTTACATCGTTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFVPTNV*LTSFAV
Trigger: TACTGCAAACGATGTAAGGCAAACATTGGTGGGCAC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp CTGGTATGGATGTTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTGTGCCCACCAATGTTTaGCTTACATCGTTTGCAGTA +
Preference number: 4 (lower is better)
Translates to: LVWMFSEAEGRLLILAWPVPTNV*LTSFAV
Trigger: TACTGCAAACGATGTAAGGCAAACATTGGTGGGCAC...AGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAACATCCATACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR GCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGAACAGGAAGATCGGTaGCCACCAATGTTTGCCTTA +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLEQEDR*PPMFAL
Trigger: TAAGGCAAACATTGGTGGGCACCGATCTTCCTGTTC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGAACAGGAAGATCGGTaGCCACCAATGTTTGCCTTA +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSEQEDR*PPMFAL
Trigger: TAAGGCAAACATTGGTGGGCACCGATCTTCCTGTTC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGTCACTTCTCTTGGGTCTGTTTTTCCAATGGTaGTGGTATGGATGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: EAEGRLLILAWPLSLLLGLFFQW*WYGCFL
Trigger: CAGAAAACATCCATACCAGCACCATTGGAAAAACAG...ACCCAAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR GCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTGGGAAACTGCCTTCTaGAAAGCAGACAAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLWETAF*KADKPV
Trigger: AACTGGCTTGTCTGCTTTGCAGAAGGCAGTTTCCCA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTGGGAAACTGCCTTCTaGAAAGCAGACAAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSWETAF*KADKPV
Trigger: AACTGGCTTGTCTGCTTTGCAGAAGGCAGTTTCCCA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTGCAGGTCTGACAGCTaGTGGTGTTTGATCAGAACT +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLCRSDS*WCLIRT
Trigger: AGTTCTGATCAAACACCAGCAGCTGTCAGACCTGCA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTGGATTTCCAGGTTTTaGTTGTGCAGGTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSWISRF*LCRSDS
Trigger: GCTGTCAGACCTGCACAAGCAAAACCTGGAAATCCA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTGGATTTCCAGGTTTTaGTTGTGCAGGTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLWISRF*LCRSDS
Trigger: GCTGTCAGACCTGCACAAGCAAAACCTGGAAATCCA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TCTTGCTTGGCCTCTGTCACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATTCGTATGGTCATGTGTaGATTCTTCTCTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SCLASVTSLGFLQNEQEDSYGHV*ILLSCS
Trigger: TGAACAGGAGAGAAGAATCCACACATGACCATACGA...ATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGTGACAGAGGCCAAGCAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CCA 90 bp GTATGGATGTTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGGTTCTGAAAGTCTGCTaGAGACTCATGTTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: VWMFSEAEGRLLILAWPLVLKVC*RLMFKG
Trigger: GCCTTTGAACATGAGTCTCCAGCAGACTTTCAGAAC...CAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAACATCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCAAACATCTGGCTTCCTaGCAGCCTATGATCCACATC +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLKHLAS*QPMIHI
Trigger: GATGTGGATCATAGGCTGCCAGGAAGCCAGATGTTT...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp CTGTCACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCGGTGCCCACCAATTATTAATTCTTGCTTaGCCTCTGTCACTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LSLLLGSCRMNRKIGAHQLLILA*PLSLLL
Trigger: CAAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAA...TTGGTGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGTGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CCA 90 bp ATCACGGTCATCCCTGTCTATGATGGAACCGTATCTTCCACTACGCTCTGTTCTTTTTTCCAATGGTGCTaGTATGGATGTTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: ITVIPVYDGTVSSTTLCSFFQWC*YGCFLR
Trigger: CCTCAGAAAACATCCATACCAGCACCATTGGAAAAA...AGAACAGAGCGTAGTGGAAGATACGGTTCCATCATAGACAGGGATGACCGTGAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTCACCTCAGGTGGTGTaGAACGATAGATACGCTTTA +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFSPQVV*NDRYAL
Trigger: TAAAGCGTATCTATCGTTCCACACCACCTGAGGTGA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCACCTCAGGTGGTGTaGAACGATAGATACGCTTTA +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPSPQVV*NDRYAL
Trigger: TAAAGCGTATCTATCGTTCCACACCACCTGAGGTGA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTTCTTCGTTTTCCAGTaGCCAGGTTTACAGCTACCA +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFFFVFQ*PGLQLP
Trigger: TGGTAGCTGTAAACCTGGCCACTGGAAAACGAAGAA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAAGACTGGTTCTTCGTTTTCCAGTaGCCAGGTTTACAGCTACCA +
Preference number: 4 (lower is better)
Translates to: SVSLEYLIRFLSGESKDWFFVFQ*PGLQLP
Trigger: TGGTAGCTGTAAACCTGGCCACTGGAAAACGAAGAA...CCAGTCTTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGTTTACCACTTTAGGTaGAGGGGGACTCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLVYHFR*RGTLFL
Trigger: AAGGAAGAGAGTCCCCCTCCACCTAAAGTGGTAAAC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TCACTGTCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAAGTTTACCACTTTAGGTaGAGGGGGACTCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SLSVSLEYLIRFLSGESKVYHFR*RGTLFL
Trigger: AAGGAAGAGAGTCCCCCTCCACCTAAAGTGGTAAAC...TTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGACAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGGAGAGTCAAAAGACTaGAGCTTTTCCCTGCGATCA +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLGESKD*SFSLRS
Trigger: TGATCGCAGGGAAAAGCTCCAGTCTTTTGACTCTCC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTGGACTGTCTTTTGCTaGTTCTTCCTGAGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLWTVFC*FFLRLQ
Trigger: TTGGAGCCTCAGGAAGAACCAGCAAAAGACAGTCCA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTGGACTGTCTTTTGCTaGTTCTTCCTGAGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSWTVFC*FFLRLQ
Trigger: TTGGAGCCTCAGGAAGAACCAGCAAAAGACAGTCCA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp CATAGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTCATGGAGGTTGTATCCCATaGAACTTGTCTCCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: HRLLAGYWGHNKFLPRGHGGCIP*NLSPFL
Trigger: TAAGAAAGGAGACAAGTTCCATGGGATACAACCTCC...ATGACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419610.5
CDS-3UTR CCA 90 bp CTGGGGCACATAGACTTCTTGCTGCGATACAGTTGGAAACAAGTAAGTCTACAGAACTCACCTGGGTATTaGGGTCATAATAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LGHIDFLLRYSWKQVSLQNSPGY*GHNKFL
Trigger: CAGGAACTTATTATGACCCCAATACCCAGGTGAGTT...CTGTAGACTTACTTGTTTCCAACTGTATCGCAGCAAGAAGTCTATGTGCCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR TCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGAAATCAAAGGGAAGTaGATCTCTGCCAGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFEIKGK*ISARKV
Trigger: AACTTTCCTGGCAGAGATTCACTTCCCTTTGATTTC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGAAATCAAAGGGAAGTaGATCTCTGCCAGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPEIKGK*ISARKV
Trigger: AACTTTCCTGGCAGAGATTCACTTCCCTTTGATTTC...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCATCGGTGTCTACCTCTaGAATCTGAATGTGGCGTAT +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLIGVYL*NLNVAY
Trigger: ATACGCCACATTCAGATTTCAGAGGTAGACACCGAT...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTCAAATTCTCCCTTCTaGATGCCAAAAGCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSSNSPF*MPKAGL
Trigger: AAGGCCTGCTTTTGGCATTCAGAAGGGAGAATTTGA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp TCACTGTCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAATCAAATTCTCCCTTCTaGATGCCAAAAGCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SLSVSLEYLIRFLSGESKSNSPF*MPKAGL
Trigger: AAGGCCTGCTTTTGGCATTCAGAAGGGAGAATTTGA...TTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGACAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR TCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGACTTATCTTGGTCTTaGACTGGACTTTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLDLSWS*TGLWLF
Trigger: GAACAGCCAAAGTCCAGTTCAAGACCAAGATAAGTC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GACACAGCCTCCTTTGCTGCTAGTGTCGATATCTTCTTTATCAACAAGTTTACGGACTTATCTTGGTCTTaGACTGGACTTTGGCTGTTC +
Preference number: 4 (lower is better)
Translates to: DTASFAASVDIFFINKFTDLSWS*TGLWLF
Trigger: GAACAGCCAAAGTCCAGTTCAAGACCAAGATAAGTC...CGTAAACTTGTTGATAAAGAAGATATCGACACTAGCAGCAAAGGAGGCTGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR TCA 90 bp GAAACAAGTAAGTCTACAGAATGTTTCAGTTTCCCAGCAATTCCAGGTCTAAGGGGCATCTTCCAAGAGTaGAAACTCCACGCAGACATA +
Preference number: 4 (lower is better)
Translates to: ETSKSTECFSFPAIPGLRGIFQE*KLHADI
Trigger: TATGTCTGCGTGGAGTTTTCACTCTTGGAAGATGCC...CCTTAGACCTGGAATTGCTGGGAAACTGAAACATTCTGTAGACTTACTTGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR TCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCCAAAAATCCAGGCTTaGTACATACTCCAGGGTAAC +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLPKIQA*YILQGN
Trigger: GTTACCCTGGAGTATGTATCAAGCCTGGATTTTTGG...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GTTGTCCTTGTCGATTTGTATCTGAAGACCAGTCTGAATTTCTGCCACCTCCCCGTTTATTCCAGTCAGTaGGTTTGTCTTCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: VVLVDLYLKTSLNFCHLPVYSSQ*VCLLHS
Trigger: AGAATGAAGAAGACAAACTCACTGACTGGAATAAAC...GGGGAGGTGGCAGAAATTCAGACTGGTCTTCAGATACAAATCGACAAGGACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR TCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTACAGCTGCTGGTGTTTaGTCAGAACTTCTTTATTGG +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPTAAGV*SELLYW
Trigger: CCAATAAAGAAGTTCTGATCAAACACCAGCAGCTGT...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTCATAATACAGCTGCTGGTGTTTaGTCAGAACTTCTTTATTGG +
Preference number: 4 (lower is better)
Translates to: RLLAGYWGHNKFLPRGHNTAAGV*SELLYW
Trigger: CCAATAAAGAAGTTCTGATCAAACACCAGCAGCTGT...ATTATGACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR TCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTACAGCTGCTGGTGTTTaGTCAGAACTTCTTTATTGG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFTAAGV*SELLYW
Trigger: CCAATAAAGAAGTTCTGATCAAACACCAGCAGCTGT...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTATATCGAGCAAACATaGCTCTTCGAACAGCATCTC +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFYIEQT*LFEQHL
Trigger: GAGATGCTGTTCGAAGAGTCATGTTTGCTCGATATA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTATATCGAGCAAACATaGCTCTTCGAACAGCATCTC +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLYIEQT*LFEQHL
Trigger: GAGATGCTGTTCGAAGAGTCATGTTTGCTCGATATA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGTAGTTCATATGAGGTaGCTCCCTACCTCTATAATC +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFVVHMR*LPTSII
Trigger: GATTATAGAGGTAGGGAGGCACCTCATATGAACTAC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGCTGTTCTGAAAGTCTaGTGGAGACTCATGTTCAAA +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPAVLKV*WRLMFK
Trigger: TTTGAACATGAGTCTCCAGCAGACTTTCAGAACAGC...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGCTGTTCTGAAAGTCTaGTGGAGACTCATGTTCAAA +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFAVLKV*WRLMFK
Trigger: TTTGAACATGAGTCTCCAGCAGACTTTCAGAACAGC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTAGTTCTTTACAGGCATaGCATCAGGAGTCCGAAAAG +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSSSLQA*HQESEK
Trigger: CTTTTCGGACTCCTGATGGCATGCCTGTAAAGAACT...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp CCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGGTTTATACTCCTTCAACTaGAAGTTCTTTACAGGCATG +
Preference number: 4 (lower is better)
Translates to: PAQTVLSSGGFPGFACAGLYSFN*KFFTGM
Trigger: CATGCCTGTAAAGAACTTGCAGTTGAAGGAGTATAA...ACCTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434592.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTGCCTTACATCGTTTaGAGTACCAAAAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLLPYIV*STKNPG
Trigger: GCCTGGATTTTTGGTACTGCAAACGATGTAAGGCAA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTTGCCTTACATCGTTTaGAGTACCAAAAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFLPYIV*STKNPG
Trigger: GCCTGGATTTTTGGTACTGCAAACGATGTAAGGCAA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp TTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGTCACTTCTCTTGCCTTACATCGTTTaGAGTACCAAAAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: FSEAEGRLLILAWPLSLLLPYIV*STKNPG
Trigger: GCCTGGATTTTTGGTACTGCAAACGATGTAAGGCAA...GAGAAGTGACAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR GCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGCCTTACATCGTTTaGAGTACCAAAAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPLPYIV*STKNPG
Trigger: GCCTGGATTTTTGGTACTGCAAACGATGTAAGGCAA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTCTTCTCTTGGGTTCTTaGAGAATGAACAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPLLLGS*RMNRKI
Trigger: GATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAG...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCTTCTCTTGGGTTCTTaGAGAATGAACAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFLLLGS*RMNRKI
Trigger: GATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAG...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp CTGGTATGGATGTTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTTCTCTTGGGTTCTTaGAGAATGAACAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: LVWMFSEAEGRLLILAWPLLLGS*RMNRKI
Trigger: GATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAG...AGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAACATCCATACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000425608.5
CDS-3UTR GCA 90 bp CTGGGGCACATAGACTTCTTGCTGCGATACAGTTGGAAACAAGTAAGTCTACAGTCTTTATTGGGAAACTaGCTTCTGCAAAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: LGHIDFLLRYSWKQVSLQSLLGN*LLQSRQ
Trigger: TTGTCTGCTTTGCAGAAGGCAGTTTCCCAATAAAGA...CTGTAGACTTACTTGTTTCCAACTGTATCGCAGCAAGAAGTCTATGTGCCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTATAGTCCATAGGTaGTCCTTCTCTATCCCGAAA +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSPIVHR*SFSIPK
Trigger: TTTCGGGATAGAGAAGGACCACCTATGGACTATAGG...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGTAATCCAAAATATTTaGATCCACAGGGGGCATCTC +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPVIQNI*IHRGHL
Trigger: GAGATGCCCCCTGTGGATCCAAATATTTTGGATTAC...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGGCCTTTCTATCGTATaGTCATGTGTGGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPGLSIV*SCVDSS
Trigger: AGAAGAATCCACACATGACCATACGATAGAAAGGCC...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGTTCTGAAAGTCTGCTaGAGACTCATGTTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSVLKVC*RLMFKG
Trigger: GCCTTTGAACATGAGTCTCCAGCAGACTTTCAGAAC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGTTCTGAAAGTCTGCTaGAGACTCATGTTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLVLKVC*RLMFKG
Trigger: GCCTTTGAACATGAGTCTCCAGCAGACTTTCAGAAC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGTAACTTCTTTGTCCTaGATCATTAGAGTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPVTSLS*IIRVPW
Trigger: CCAGGGAACTCTAATGATCCAGGACAAAGAAGTTAC...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGGGCTGTTTTTCCAATaGTGCTGGTATGGATGTTTT +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLGLFFQ*CWYGCF
Trigger: AAAACATCCATACCAGCACCATTGGAAAAACAGCCC...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTCACCTCAGGTGGTGTaGAACGATAGATACGCTTTA +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLSPQVV*NDRYAL
Trigger: TAAAGCGTATCTATCGTTCCACACCACCTGAGGTGA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTTCTTCGTTTTCCAGTaGCCAGGTTTACAGCTACCA +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSFFVFQ*PGLQLP
Trigger: TGGTAGCTGTAAACCTGGCCACTGGAAAACGAAGAA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTCTTCTTGCTGGGTATTaGGGTCATAATAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPLLAGY*GHNKFL
Trigger: CAGGAACTTATTATGACCCCAATACCCAGCAAGAAG...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCTTCTTGCTGGGTATTaGGGTCATAATAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLLLAGY*GHNKFL
Trigger: CAGGAACTTATTATGACCCCAATACCCAGCAAGAAG...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCTTCTTGCTGGGTATTaGGGTCATAATAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFLLAGY*GHNKFL
Trigger: CAGGAACTTATTATGACCCCAATACCCAGCAAGAAG...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
CDS-3UTR CCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGGAGGTTGTATCCCATaGAACTTGTCTCCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPGGCIP*NLSPFL
Trigger: TAAGAAAGGAGACAAGTTCCATGGGATACAACCTCC...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
3UTR CAA 72 bp CAAAGCAGACAAGCCAGTTTATTCCAGTCAGTGAGTTaGTCTTCTTCATTCTCCTTCTTGGTTTGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QSRQASLFQSVS*SSSFSFLVCSS
Trigger: AGAGGAGCAAACCAAGAAGGAGAATGAAGAAGACAAACTCACTGACTGGAATAAACTGGCTTGTCTGCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR TCA 90 bp TTGCTGCTAGTGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTCTGCCCCTAAAATCCTaGTCAGTCCTAGATCGGTGT +
Preference number: 4 (lower is better)
Translates to: LLLVSISSLSTSLRSLSVLPLKS*SVLDRC
Trigger: ACACCGATCTAGGACTGATCAGGATTTTAGGGGCAG...AACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACACTAGCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR TCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTACAGCTGCTGGTGTTTaGTCAGAACTTCTTTATTGG +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSTAAGV*SELLYW
Trigger: CCAATAAAGAAGTTCTGATCAAACACCAGCAGCTGT...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCACAGCTGCTGGTGTTTaGTCAGAACTTCTTTATTGG +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLTAAGV*SELLYW
Trigger: CCAATAAAGAAGTTCTGATCAAACACCAGCAGCTGT...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp TTGCTGCTAGTGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTTGCTTGTGCAGGTCTaGCAGCTGCTGGTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: LLLVSISSLSTSLRSLSVLLVQV*QLLVFD
Trigger: ATCAAACACCAGCAGCTGTCAGACCTGCACAAGCAA...AACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACACTAGCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTATATCGAGCAAACATaGCTCTTCGAACAGCATCTC +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSYIEQT*LFEQHL
Trigger: GAGATGCTGTTCGAAGAGTCATGTTTGCTCGATATA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTACAAGGTTTTCAACATaGCTGCTGCAGAAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPTRFST*LLQKKL
Trigger: AAGCTTTTTCTGCAGCAGTCATGTTGAAAACCTTGT...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp TCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAAGACTGGACAAGGTTTTCAACATaGCTGCTGCAGAAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: SVSLEYLIRFLSGESKDWTRFST*LLQKKL
Trigger: AAGCTTTTTCTGCAGCAGTCATGTTGAAAACCTTGT...CCAGTCTTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR TCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTATTGTCCAGAGAGTTTaGAATCTACACACCAGCATA +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFIVQRV*NLHTSI
Trigger: TATGCTGGTGTGTAGATTTCAAACTCTCTGGACAAT...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp TGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGGAGTATGCTCCTCTACATTTaGAAAAGGAGGCCCCGAATG +
Preference number: 4 (lower is better)
Translates to: CRYLLYQQVYDHCQFPWSMLLYI*KRRPRM
Trigger: CATTCGGGGCCTCCTTTTGCAAATGTAGAGGAGCAT...ACTCCAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR GCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGTAGTTCATATGAGGTaGCTCCCTACCTCTATAATC +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLVVHMR*LPTSII
Trigger: GATTATAGAGGTAGGGAGGCACCTCATATGAACTAC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp TCACTGTCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAATTGCCTTACATCGTTTaGAGTACCAAAAATCCAGGC +
Preference number: 4 (lower is better)
Translates to: SLSVSLEYLIRFLSGESKLPYIV*STKNPG
Trigger: GCCTGGATTTTTGGTACTGCAAACGATGTAAGGCAA...TTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGACAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR GCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCTCTTGGGTTCTTaGAGAATGAACAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLLLLGS*RMNRKI
Trigger: GATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAG...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTTCTCTTGGGTTCTTaGAGAATGAACAGGAAGATC +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSLLLGS*RMNRKI
Trigger: GATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAG...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCTGTTTTTCCAATGGTaGTGGTATGGATGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFLFFQW*WYGCFL
Trigger: CAGAAAACATCCATACCAGCACCATTGGAAAAACAG...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCTGTTTTTCCAATGGTaGTGGTATGGATGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLLFFQW*WYGCFL
Trigger: CAGAAAACATCCATACCAGCACCATTGGAAAAACAG...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp ATGTGGTCAGAATGGTCCCCAGAATCATTTCTTCGTTTTCCAGTGGCCAGGTTTGTCATAATAAGTTCCTaGCAAGGGGTCATAATAGTA +
Preference number: 4 (lower is better)
Translates to: MWSEWSPESFLRFPVARFVIISS*QGVIIV
Trigger: TACTATTATGACCCCTTGGCAGGAACTTATTATGAC...AAACCTGGCCACTGGAAAACGAAGAAATGATTCTGGGGACCATTCTGACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR GCA 90 bp TTGCTGCTAGTGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTCTTAAAGACGTCTTCTaGAGGGGCCTTCCCTTCACT +
Preference number: 4 (lower is better)
Translates to: LLLVSISSLSTSLRSLSVLKDVF*RGLPFT
Trigger: AGTGAAGGGAAGGCCCCTGCAGAAGACGTCTTTAAG...AACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACACTAGCAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTCTTTATTGGGAAACTaGCTTCTGCAAAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFSLLGN*LLQSRQ
Trigger: TTGTCTGCTTTGCAGAAGGCAGTTTCCCAATAAAGA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTTCAACATGACTGCTaGAGAAAAAGCTTTCACCCA +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLFQHDC*RKSFHP
Trigger: TGGGTGAAAGCTTTTTCTGCAGCAGTCATGTTGAAA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCGGAGTAAACTTTTATaGTCCCATTTCAGAACACGA +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLRSKLL*SHFRTR
Trigger: TCGTGTTCTGAAATGGGAGCATAAAAGTTTACTCCG...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp ATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGGAGTACTTACCCCTAAAATCTGCATaGGATCCATCCCGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: ISSLSTSLRSLSVSLEYLPLKSA*DPSRPL
Trigger: TAGAGGCCGGGATGGATCCCATGCAGATTTTAGGGG...TAAGTACTCCAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGTAATCCAAAATATTTaGATCCACAGGGGGCATCTC +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSVIQNI*IHRGHL
Trigger: GAGATGCCCCCTGTGGATCCAAATATTTTGGATTAC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TCACTGTCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAAGTAATCCAAAATATTTaGATCCACAGGGGGCATCTC +
Preference number: 4 (lower is better)
Translates to: SLSVSLEYLIRFLSGESKVIQNI*IHRGHL
Trigger: GAGATGCCCCCTGTGGATCCAAATATTTTGGATTAC...TTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGACAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTCGTATGGTCATGTGTaGATTCTTCTCTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLSYGHV*ILLSCS
Trigger: TGAACAGGAGAGAAGAATCCACACATGACCATACGA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTCGTATGGTCATGTGTaGATTCTTCTCTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSSYGHV*ILLSCS
Trigger: TGAACAGGAGAGAAGAATCCACACATGACCATACGA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGGCCTTTCTATCGTATaGTCATGTGTGGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLGLSIV*SCVDSS
Trigger: AGAAGAATCCACACATGACCATACGATAGAAAGGCC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGTAACTTCTTTGTCCTaGATCATTAGAGTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLVTSLS*IIRVPW
Trigger: CCAGGGAACTCTAATGATCCAGGACAAAGAAGTTAC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp ATGTGGTCAGAATGGTCCCCAGAATCATTTCTTCGTTTTCCAGTGGCCAGGTTTTTATTAATTCTTGCTTaGCCTCTGTCACTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: MWSEWSPESFLRFPVARFLLILA*PLSLLL
Trigger: CAAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAA...AAACCTGGCCACTGGAAAACGAAGAAATGATTCTGGGGACCATTCTGACCACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTTTTTCCAATGGTGCTaGTATGGATGTTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFFFQWC*YGCFLR
Trigger: CCTCAGAAAACATCCATACCAGCACCATTGGAAAAA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
42% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGGGCTGTTTTTCCAATaGTGCTGGTATGGATGTTTT +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSGLFFQ*CWYGCF
Trigger: AAAACATCCATACCAGCACCATTGGAAAAACAGCCC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGGGCTGTTTTTCCAATaGTGCTGGTATGGATGTTTT +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLGLFFQ*CWYGCF
Trigger: AAAACATCCATACCAGCACCATTGGAAAAACAGCCC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GGAGGTTGTATCCCATGGAACTTGTCTCCTTTCTTAATCGAGTTCTTTATATCGTCACCTCAGGTGGTGTaGAACGATAGATACGCTTTA +
Preference number: 4 (lower is better)
Translates to: GGCIPWNLSPFLIEFFISSPQVV*NDRYAL
Trigger: TAAAGCGTATCTATCGTTCCACACCACCTGAGGTGA...CGATATAAAGAACTCGATTAAGAAAGGAGACAAGTTCCATGGGATACAACCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TCACTGTCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAACTTCTTGCTGGGTATTaGGGTCATAATAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SLSVSLEYLIRFLSGESKLLAGY*GHNKFL
Trigger: CAGGAACTTATTATGACCCCAATACCCAGCAAGAAG...TTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGACAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419610.5
CDS-3UTR CCA 90 bp TGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGGAGTGTTTACCACTTTAGGTaGAGGGGGACTCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: CRYLLYQQVYDHCQFPWSVYHFR*RGTLFL
Trigger: AAGGAAGAGAGTCCCCCTCCACCTAAAGTGGTAAAC...ACTCCAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TGCTTGTGCAGGTCTGACAGCTGCTGGTGTTTGATCAGAACTTCTTTATTGGGATCAGAACTTCTTTATTaGGAAACTGCCTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: CLCRSDSCWCLIRTSLLGSELLY*ETAFCK
Trigger: TTTGCAGAAGGCAGTTTCCCAATAAAGAAGTTCTGA...TCCCAATAAAGAAGTTCTGATCAAACACCAGCAGCTGTCAGACCTGCACAAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CCA 90 bp CATAGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTCATTCAGAACTTCTTTATTaGGAAACTGCCTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: HRLLAGYWGHNKFLPRGHSELLY*ETAFCK
Trigger: TTTGCAGAAGGCAGTTTCCCAATAAAGAAGTTCTGA...ATGACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGTTTTATCTTCCGGTaGATTTCCAGGTTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLCFIFR*ISRFCL
Trigger: CAAGCAAAACCTGGAAATCCACCGGAAGATAAAACA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTGTTTTATCTTCCGGTaGATTTCCAGGTTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFCFIFR*ISRFCL
Trigger: CAAGCAAAACCTGGAAATCCACCGGAAGATAAAACA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGTTTTATCTTCCGGTaGATTTCCAGGTTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPCFIFR*ISRFCL
Trigger: CAAGCAAAACCTGGAAATCCACCGGAAGATAAAACA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp CTAGTGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGGGAGAGTCAAAAGACTaGAGCTTTTCCCTGCGATCA +
Preference number: 4 (lower is better)
Translates to: LVSISSLSTSLRSLSVSLGESKD*SFSLRS
Trigger: TGATCGCAGGGAAAAGCTCCAGTCTTTTGACTCTCC...CAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGGAGGTTGTATCCCATaGAACTTGTCTCCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSGGCIP*NLSPFL
Trigger: TAAGAAAGGAGACAAGTTCCATGGGATACAACCTCC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGGAGGTTGTATCCCATaGAACTTGTCTCCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLGGCIP*NLSPFL
Trigger: TAAGAAAGGAGACAAGTTCCATGGGATACAACCTCC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGTAACTTCTTTGTCCTaGATCATTAGAGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFVTSLS*IIRVPC
Trigger: ACAGGGAACTCTAATGATCCAGGACAAAGAAGTTAC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422955.5
CDS-3UTR CCA 90 bp GAATCATTTCTTCGTTTTCCAGTGGCCAGGTTTACAGCTACCATCTTCCCATCAGTAACTTCTTTGTCCTaGATCATTAGAGTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: ESFLRFPVARFTATIFPSVTSLS*IIRVPC
Trigger: ACAGGGAACTCTAATGATCCAGGACAAAGAAGTTAC...TGATGGGAAGATGGTAGCTGTAAACCTGGCCACTGGAAAACGAAGAAATGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR TCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTCCTTCTCTTGTTTCTaGATGCTCAAATTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSSFSCF*MLKFSL
Trigger: AAGGGAGAATTTGAGCATTCAGAAACAAGAGAAGGA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGTTTATTCCAGTCAGTaGGTTTGTCTTCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPVYSSQ*VCLLHS
Trigger: AGAATGAAGAAGACAAACTCACTGACTGGAATAAAC...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGTTTATTCCAGTCAGTaGGTTTGTCTTCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFVYSSQ*VCLLHS
Trigger: AGAATGAAGAAGACAAACTCACTGACTGGAATAAAC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR TCA 90 bp GAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCTTATTGTCCAGAGAGTTTaGAATCTACACACCAGCATA +
Preference number: 4 (lower is better)
Translates to: ETNKTRGRLYPMELVSFLIVQRV*NLHTSI
Trigger: TATGCTGGTGTGTAGATTTCAAACTCTCTGGACAAT...AAGAAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR GCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTTATACTCCTTCAACTaGAAGTTCTTTACAGGCATG +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFLYSFN*KFFTGM
Trigger: CATGCCTGTAAAGAACTTGCAGTTGAAGGAGTATAA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTATACTCCTTCAACTaGAAGTTCTTTACAGGCATG +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPLYSFN*KFFTGM
Trigger: CATGCCTGTAAAGAACTTGCAGTTGAAGGAGTATAA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp TTGCTGCTAGTGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTGAACAGGAAGATCGGTaGCCACCAATGTTTGCCTTA +
Preference number: 4 (lower is better)
Translates to: LLLVSISSLSTSLRSLSVEQEDR*PPMFAL
Trigger: TAAGGCAAACATTGGTGGGCACCGATCTTCCTGTTC...AACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACACTAGCAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTGTTTTTCCAATGGTaGTGGTATGGATGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSLFFQW*WYGCFL
Trigger: CAGAAAACATCCATACCAGCACCATTGGAAAAACAG...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGTTTTTCCAATGGTaGTGGTATGGATGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLLFFQW*WYGCFL
Trigger: CAGAAAACATCCATACCAGCACCATTGGAAAAACAG...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GCAAAGCAGACAAGCCAGTTTATTCCAGTCAGTGAGTTTGTCTTCTTCATTCTCCTGTTTTTCCAATGGTaGTGGTATGGATGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: AKQTSQFIPVSEFVFFILLFFQW*WYGCFL
Trigger: CAGAAAACATCCATACCAGCACCATTGGAAAAACAG...GAGAATGAAGAAGACAAACTCACTGACTGGAATAAACTGGCTTGTCTGCTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGTCATAATAAGTTCCTaGCAAGGGGTCATAATAGTA +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLVIISS*QGVIIV
Trigger: TACTATTATGACCCCTTGGCAGGAACTTATTATGAC...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGTCATAATAAGTTCCTaGCAAGGGGTCATAATAGTA +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPVIISS*QGVIIV
Trigger: TACTATTATGACCCCTTGGCAGGAACTTATTATGAC...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GACACAGCCTCCTTTGCTGCTAGTGTCGATATCTTCTTTATCAACAAGTTTACGTCTTTATTGGGAAACTaGCTTCTGCAAAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: DTASFAASVDIFFINKFTSLLGN*LLQSRQ
Trigger: TTGTCTGCTTTGCAGAAGGCAGTTTCCCAATAAAGA...CGTAAACTTGTTGATAAAGAAGATATCGACACTAGCAGCAAAGGAGGCTGTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTCTTTATTGGGAAACTaGCTTCTGCAAAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSSLLGN*LLQSRQ
Trigger: TTGTCTGCTTTGCAGAAGGCAGTTTCCCAATAAAGA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCAAGTTTACGATCACTaGAAAAGAAGCAGACACCAT +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSQVYDH*KRSRHH
Trigger: ATGGTGTCTGCTTCTTTTGCAGTGATCGTAAACTTG...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000421682.1
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGATGAATCTCTGCTCTaGAAATCAGAAGACGAAAAA +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLDESLL*KSEDEK
Trigger: TTTTTCGTCTTCTGATTTCCAGAGCAGAGATTCATC...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGTCACTTCTCGATGAATCTCTGCTCTaGAAATCAGAAGACGAAAAA +
Preference number: 4 (lower is better)
Translates to: FSEAEGRLLILAWPLSLLDESLL*KSEDEK
Trigger: TTTTTCGTCTTCTGATTTCCAGAGCAGAGATTCATC...GAGAAGTGACAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CCA 90 bp CTAGTGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGCCTATAGTCCATAGGTaGTCCTTCTCTATCCCGAAA +
Preference number: 4 (lower is better)
Translates to: LVSISSLSTSLRSLSVSLPIVHR*SFSIPK
Trigger: TTTCGGGATAGAGAAGGACCACCTATGGACTATAGG...CAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACACTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp TTGCTGCTAGTGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTCCTCCATGCATCCGATaGCATCTTCCAAGAGTGAAA +
Preference number: 4 (lower is better)
Translates to: LLLVSISSLSTSLRSLSVPPCIR*HLPRVK
Trigger: TTTCACTCTTGGAAGATGCCATCGGATGCATGGAGG...AACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACACTAGCAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTATTAATTCTTGCTTaGCCTCTGTCACTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLLLILA*PLSLLL
Trigger: CAAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTATTAATTCTTGCTTaGCCTCTGTCACTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPLLILA*PLSLLL
Trigger: CAAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTTTTTCCAATGGTGCTaGTATGGATGTTTTCTGAGG +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLFFQWC*YGCFLR
Trigger: CCTCAGAAAACATCCATACCAGCACCATTGGAAAAA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp ATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGGAGTACTTACAAGAGGCCGATCAGTaGGTTTACCACTTTAGGTGG +
Preference number: 4 (lower is better)
Translates to: ISSLSTSLRSLSVSLEYLQEADQ*VYHFRW
Trigger: CCACCTAAAGTGGTAAACCCACTGATCGGCCTCTTG...TAAGTACTCCAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCAGAACTTCTTTATTaGGAAACTGCCTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLSELLY*ETAFCK
Trigger: TTTGCAGAAGGCAGTTTCCCAATAAAGAAGTTCTGA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCAGAACTTCTTTATTaGGAAACTGCCTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPSELLY*ETAFCK
Trigger: TTTGCAGAAGGCAGTTTCCCAATAAAGAAGTTCTGA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TCACTGTCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAATGTTTTATCTTCCGGTaGATTTCCAGGTTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: SLSVSLEYLIRFLSGESKCFIFR*ISRFCL
Trigger: CAAGCAAAACCTGGAAATCCACCGGAAGATAAAACA...TTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGACAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTGTTTTATCTTCCGGTaGATTTCCAGGTTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSCFIFR*ISRFCL
Trigger: CAAGCAAAACCTGGAAATCCACCGGAAGATAAAACA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAACAAGTAAGTCTACAGAATGTTTCAGTTTCCCAGCAATTCCAGGTCTAAGGGGAGGTTGTATCCCATaGAACTTGTCTCCTTTCTTA +
Preference number: 4 (lower is better)
Translates to: ETSKSTECFSFPAIPGLRGGCIP*NLSPFL
Trigger: TAAGAAAGGAGACAAGTTCCATGGGATACAACCTCC...CCTTAGACCTGGAATTGCTGGGAAACTGAAACATTCTGTAGACTTACTTGTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGTAACTTCTTTGTCCTaGATCATTAGAGTTCCCGAA +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLVTSLS*IIRVPE
Trigger: TTCGGGAACTCTAATGATCCAGGACAAAGAAGTTAC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442092.5
CDS-3UTR TCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGTTTATTCCAGTCAGTaGGTTTGTCTTCTTCATTCT +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSVYSSQ*VCLLHS
Trigger: AGAATGAAGAAGACAAACTCACTGACTGGAATAAAC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR GCA 90 bp GACACAGCCTCCTTTGCTGCTAGTGTCGATATCTTCTTTATCAACAAGTTTACGTTATACTCCTTCAACTaGAAGTTCTTTACAGGCATG +
Preference number: 4 (lower is better)
Translates to: DTASFAASVDIFFINKFTLYSFN*KFFTGM
Trigger: CATGCCTGTAAAGAACTTGCAGTTGAAGGAGTATAA...CGTAAACTTGTTGATAAAGAAGATATCGACACTAGCAGCAAAGGAGGCTGTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR GCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGTCATAATAAGTTCCTaGCAAGGGGTCATAATAGTA +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSVIISS*QGVIIV
Trigger: TACTATTATGACCCCTTGGCAGGAACTTATTATGAC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGATGAATCTCTGCTCTaGAAATCAGAAGACGAAAAA +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLDESLL*KSEDEK
Trigger: TTTTTCGTCTTCTGATTTCCAGAGCAGAGATTCATC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCTTGATGAATCTCTGCTCTaGAAATCAGAAGACGAAAAA +
Preference number: 4 (lower is better)
Translates to: ETNKTRGRLYPMELVSFLDESLL*KSEDEK
Trigger: TTTTTCGTCTTCTGATTTCCAGAGCAGAGATTCATC...AAGAAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp ATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGGAGTACTTAAAACATCTGGCTTCCTaGCAGCCTATGATCCACATC +
Preference number: 4 (lower is better)
Translates to: ISSLSTSLRSLSVSLEYLKHLAS*QPMIHI
Trigger: GATGTGGATCATAGGCTGCCAGGAAGCCAGATGTTT...TAAGTACTCCAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTTATTAATTCTTGCTTaGCCTCTGTCACTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLLLILA*PLSLLL
Trigger: CAAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTTATTAATTCTTGCTTaGCCTCTGTCACTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSLLILA*PLSLLL
Trigger: CAAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTCAGAACTTCTTTATTaGGAAACTGCCTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLSELLY*ETAFCK
Trigger: TTTGCAGAAGGCAGTTTCCCAATAAAGAAGTTCTGA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CCA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTATTTTAAGACGAAGTaGCGGAGTAAACTTTTATGC +
Preference number: 4 (lower is better)
Translates to: GETNKTRGRLYPMELVSFYFKTK*RSKLLC
Trigger: GCATAAAAGTTTACTCCGCCACTTCGTCTTAAAATA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000443081.5
ENST00000454079.5
3UTR CAA 72 bp CAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTaGTCTCCTTTCTTAATCGAGTTCTTTATATCGAGC +
Preference number: 4 (lower is better)
Translates to: QTKQEGGCIPWN*SPFLIEFFISS
Trigger: GCTCGATATAAAGAACTCGATTAAGAAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR GCA 90 bp CTAGTGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGCGGAGTAAACTTTTATaGTCCCATTTCAGAACACGA +
Preference number: 4 (lower is better)
Translates to: LVSISSLSTSLRSLSVSLRSKLL*SHFRTR
Trigger: TCGTGTTCTGAAATGGGAGCATAAAAGTTTACTCCG...CAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACACTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR GCA 90 bp TGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGGAGTTGTTCTTACCTGTATTaGCACAAGGCACTGATTTTC +
Preference number: 4 (lower is better)
Translates to: CRYLLYQQVYDHCQFPWSCSYLY*HKALIF
Trigger: GAAAATCAGTGCCTTGTGGCAATACAGGTAAGAACA...ACTCCAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR GCA 90 bp TATCCCATGGAACTTGTCTCCTTTCTTAATCGAGTTCTTTATATCGAGCAAACACTGTTTTTCCAATGGTaGTGGTATGGATGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: YPMELVSFLNRVLYIEQTLFFQW*WYGCFL
Trigger: CAGAAAACATCCATACCAGCACCATTGGAAAAACAG...TGTTTGCTCGATATAAAGAACTCGATTAAGAAAGGAGACAAGTTCCATGGGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp CTAGTGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGTTATTAATTCTTGCTTaGCCTCTGTCACTTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LVSISSLSTSLRSLSVSLLLILA*PLSLLL
Trigger: CAAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAA...CAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACACTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGGAGTTCAGAACTTCTTTATTaGGAAACTGCCTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: CRYLLYQQVYDHCQFPWSSELLY*ETAFCK
Trigger: TTTGCAGAAGGCAGTTTCCCAATAAAGAAGTTCTGA...ACTCCAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CCA 90 bp TTGCTGCTAGTGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTTGCTGCGATACAGTTaGAAACAAGTAAGTCTACAG +
Preference number: 4 (lower is better)
Translates to: LLLVSISSLSTSLRSLSVLLRYS*KQVSLQ
Trigger: CTGTAGACTTACTTGTTTCCAACTGTATCGCAGCAA...AACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACACTAGCAGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR TCA 90 bp ATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGGAGTACTTATCCTTCTCTTGTTTCTaGATGCTCAAATTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: ISSLSTSLRSLSVSLEYLSFSCF*MLKFSL
Trigger: AAGGGAGAATTTGAGCATTCAGAAACAAGAGAAGGA...TAAGTACTCCAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS GCA 90 bp CGACCCAGCGCCGCGGACACCGGAACTTCCTCCGCGCGGGGCCACTaGTACCACAAAGGCGCCGCGCCGCTGCCTTCAGCGCTCGGCCCG +
Preference number: 5 (lower is better)
Translates to: RPSAADTGTSSARGH*YHKGAAPLPSALGP
Trigger: CGGGCCGAGCGCTGAAGGCAGCGGCGCGGCGCCTTTGTGGTAGCAGTGGCCCCGCGCGGAGGAAGTTCCGGTGTCCGCGGCGCTGGGTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419610.5
ENST00000441115.5
ENST00000442092.5
ENST00000443081.5
CDS GCA 90 bp CTTCCTCCGCGCGGGGCCACTGCTACCACAAAGGCGCCGCGCCGCTaGCTTCAGCGCTCGGCCCGCTGGGAGATGAAGTACAGCTGCCGG +
Preference number: 5 (lower is better)
Translates to: LPPRGATATTKAPRR*LQRSARWEMKYSCR
Trigger: CCGGCAGCTGTACTTCATCTCCCAGCGGGCCGAGCGCTGAAGGCAGCGGCGCGGCGCCTTTGTGGTAGCAGTGGCCCCGCGCGGAGGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000442092.5
ENST00000443081.5
CDS TCA 90 bp CAAAGGCGCCGCGCCGCTGCCTTCAGCGCTCGGCCCGCTGGGAGATaGAGTACAGCTGCCGGTCCCGCAGACTCTTACTCCCGCCGTGCC +
Preference number: 5 (lower is better)
Translates to: QRRRAAAFSARPAGR*STAAGPADSYSRRA
Trigger: GGCACGGCGGGAGTAAGAGTCTGCGGGACCGGCAGCTGTACTTCATCTCCCAGCGGGCCGAGCGCTGAAGGCAGCGGCGCGGCGCCTTTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442092.5
CDS CCA 90 bp GCTACCACAAAGGCGCCGCGCCGCTGCCTTCAGCGCTCGGCCCGCTaGGAGATGAAGTACAGCTGCCGGTCCCGCAGACTCTTACTCCCG +
Preference number: 5 (lower is better)
Translates to: ATTKAPRRCLQRSAR*EMKYSCRSRRLLLP
Trigger: CGGGAGTAAGAGTCTGCGGGACCGGCAGCTGTACTTCATCTCCCAGCGGGCCGAGCGCTGAAGGCAGCGGCGCGGCGCCTTTGTGGTAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442092.5
CDS GCA 90 bp CGCTTCCAGGTTCTACCGCCCCGACGACCGGGCTCGGAGCTCTTGTaGCCTCCGGTCCAGCGGAGCCTCCCTTGTGTCTGTCCAAGTCTG +
Preference number: 5 (lower is better)
Translates to: RFQVLPPRRPGSELL*PPVQRSLPCVCPSL
Trigger: CAGACTTGGACAGACACAAGGGAGGCTCCGCTGGACCGGAGGGCACAAGAGCTCCGAGCCCGGTCGTCGGGGCGGTAGAACCTGGAAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433811.1
ENST00000491874.5
CDS GCA 90 bp CTCGGCTCACTGCAAGCTCCGCCTCCGGAGTTCACGCCATTCTCCTaGCTCAGCCTCCCGAGTAGCTGCGACTACAGGCGCCTGCCACCA +
Preference number: 5 (lower is better)
Translates to: LGSLQAPPPEFTPFS*LSLPSSCDYRRLPP
Trigger: TGGTGGCAGGCGCCTGTAGTCGCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACTCCGGAGGCGGAGCTTGCAGTGAGCCGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483350.1
CDS TCA 90 bp TGTGCCCTCCGGTCCAGCGGAGCCTCCCTTGTGTCTGTCCAAGTCTaGGGACGAGGCTACGTGCTAAGCACAAGAGCTCCCTTCCTAGTG +
Preference number: 5 (lower is better)
Translates to: CALRSSGASLVSVQV*GRGYVLSTRAPFLV
Trigger: CACTAGGAAGGGAGCTCTTGTGCTTAGCACGTAGCCTCGTCCTCAGACTTGGACAGACACAAGGGAGGCTCCGCTGGACCGGAGGGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433811.1
ENST00000491874.5
CDS-3UTR CAA 90 bp CCTGTCCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTAGGTCTCTTCGGAAAGTaGGCCCTTCCCTTCGAGAAG +
Preference number: 5 (lower is better)
Translates to: PVPFLQPVACWTQPPLLLGLFGK*ALPFEK
Trigger: CTTCTCGAAGGGAAGGGCCAACTTTCCGAAGAGACC...TAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGGACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS GCA 90 bp GGTCCCGTTGGGCATCTCGGGCAGTTTTGCCCTCTGGAAAAGACTTaGTCTGGCCATAGCCAAACATCTGGCTTCCTGGCAGCCTATGAT +
Preference number: 5 (lower is better)
Translates to: GPVGHLGQFCPLEKT*SGHSQTSGFLAAYD
Trigger: ATCATAGGCTGCCAGGAAGCCAGATGTTTGGCTATGGCCAGAGCAAGTCTTTTCCAGAGGGCAAAACTGCCCGAGATGCCCAACGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS GCA 90 bp ACATCTGGCTTCCTGGCAGCCTATGATCCACATCACGGTACTCCATaGTTCTGTAATCGGTGTCTTGCCGCCCAAGAAAGTCCAGACCGC +
Preference number: 5 (lower is better)
Translates to: TSGFLAAYDPHHGTP*FCNRCLAAQESPDR
Trigger: GCGGTCTGGACTTTCTTGGGCGGCAAGACACCGATTACAGAAGCATGGAGTACCGTGATGTGGATCATAGGCTGCCAGGAAGCCAGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS CCA 90 bp TTGATCCTGAAGGTCCCGTTGGGCATCTCGGGCAGTTTTGCCCTCTaGAAAAGACTTGCTCTGGCCATAGCCAAACATCTGGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: LILKVPLGISGSFAL*KRLALAIAKHLASW
Trigger: CCAGGAAGCCAGATGTTTGGCTATGGCCAGAGCAAGTCTTTTCCAGAGGGCAAAACTGCCCGAGATGCCCAACGGGACCTTCAGGATCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp CCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTAGTGTCTTGATGATACGGACGTaGGCAGTAGTAAGGCGGACA +
Preference number: 5 (lower is better)
Translates to: PFPPASSLLDTASFAASVLMIRT*AVVRRT
Trigger: TGTCCGCCTTACTACTGCCAACGTCCGTATCATCAA...GACACTAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TATTCACCCAAGAGGCCGATCAGTGGGTTTACCACTTTAGGTGGAGGGGGACTCTCTGTAATCGGTGTCTaGCCGCCCAAGAAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: YSPKRPISGFTTLGGGGLSVIGV*PPKKVQ
Trigger: CTGGACTTTCTTGGGCGGCAAGACACCGATTACAGA...GAGTCCCCCTCCACCTAAAGTGGTAAACCCACTGATCGGCCTCTTGGGTGAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CAA 90 bp CAGGTTCCTTATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGATCCTGAAGGTCCCGTaGGGCATCTCGGGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: QVPYQLVLGAGWAVFPMVILKVP*GISGSF
Trigger: AAAACTGCCCGAGATGCCCAACGGGACCTTCAGGAT...CACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATAAGGAACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CAA 90 bp CTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTAGTGTCGATATCTGGGCCTGTTCTGTTCTaGATGATACGGACGTTGGCA +
Preference number: 5 (lower is better)
Translates to: LQPVACWTQPPLLLVSISGPVLF*MIRTLA
Trigger: TGCCAACGTCCGTATCATCAAGAACAGAACAGGCCC...AGATATCGACACTAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CAA 90 bp CCCACTCCAGGGACCAGGACACATTCAGACCACCCACTGTCCACTTTTTCAAGAATTCTCCTTCTTGGTTaGCTCCTCTCGCTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: PTPGTRTHSDHPLSTFSRILLLG*LLSLLG
Trigger: CCCCAGAAGCGAGAGGAGCAAACCAAGAAGGAGAAT...TCTTGAAAAAGTGGACAGTGGGTGGTCTGAATGTGTCCTGGTCCCTGGAGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CAA 90 bp CCAGATAGGCTAGCTCCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTCCAGCCAGTAGCCTGTaGGACACAGCCTCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: PDRLAPAQTVLSSGGFPGPASSL*DTASFA
Trigger: AGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGG...ACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGGAGCTAGCCTATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGATGCCAGAGTGTCTCTCTaGAGCATGACTCTTAAGGGG +
Preference number: 5 (lower is better)
Translates to: SAGLRGWLGCFSNGAGMDARVSL*SMTLKG
Trigger: CCCCTTAAGAGTCATGCTCAAGAGAGACACTCTGGC...ATCCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CAA 90 bp CCTTATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATCTGTAATCGGTGTCTaGCCGCCCAAGAAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: PYQLVLGAGWAVFPMVLVSVIGV*PPKKVQ
Trigger: CTGGACTTTCTTGGGCGGCAAGACACCGATTACAGA...TACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CAA 90 bp CAGGTTCCTTATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGGCATCTCGGGCAGTTTaGCCCTCTGGAAAAGACTTG +
Preference number: 5 (lower is better)
Translates to: QVPYQLVLGAGWAVFPMVASRAV*PSGKDL
Trigger: CAAGTCTTTTCCAGAGGGCAAAACTGCCCGAGATGC...CACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATAAGGAACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CAA 90 bp GCGCAGCATGATGGTCTTGCTCTCCCTCTCGTCACTGATGTCATGCCTATAGTCTTGATGATACGGACGTaGGCAGTAGTAAGGCGGACA +
Preference number: 5 (lower is better)
Translates to: AQHDGLALPLVTDVMPIVLMIRT*AVVRRT
Trigger: TGTCCGCCTTACTACTGCCAACGTCCGTATCATCAA...GACTATAGGCATGACATCAGTGACGAGAGGGAGAGCAAGACCATCATGCTGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR CAA 90 bp CCTGTCCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTATTTCCTTCTTGCTACTaGACTTTCCTTGACTGGTGG +
Preference number: 5 (lower is better)
Translates to: PVPFLQPVACWTQPPLLLFPSCY*TFLDWW
Trigger: CCACCAGTCAAGGAAAGTCAAGTAGCAAGAAGGAAA...TAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGGACAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGATGGTGCCCACCAATGTTaGCCTTACACGAAAAGGTCC +
Preference number: 5 (lower is better)
Translates to: SAGLRGWLGCFSNGAGMDGAHQC*PYTKRS
Trigger: GGACCTTTTCGTGTAAGGCAAACATTGGTGGGCACC...ATCCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419610.5
CDS-3UTR CAA 90 bp GTTGTCCTTGTCGATTTGTATCTGAAGACCAGTCTGAATTTCTGCCACCTCCCCCGCAGCATGATGGTCTaGCTCTCCCTCTCGTCACTG +
Preference number: 5 (lower is better)
Translates to: VVLVDLYLKTSLNFCHLPRSMMV*LSLSSL
Trigger: CAGTGACGAGAGGGAGAGCAAGACCATCATGCTGCG...GGGGAGGTGGCAGAAATTCAGACTGGTCTTCAGATACAAATCGACAAGGACAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS GCA 90 bp TATAATCTTGATCCTGAAGGTCCCGTTGGGCATCTCGGGCAGTTTTaGCCTCTGGAAAAGACTTGCTCTGGCCATAGCCAAACATCTGGC +
Preference number: 5 (lower is better)
Translates to: YNLDPEGPVGHLGQF*PLEKTCSGHSQTSG
Trigger: GCCAGATGTTTGGCTATGGCCAGAGCAAGTCTTTTCCAGAGGGCAAAACTGCCCGAGATGCCCAACGGGACCTTCAGGATCAAGATTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp CCTGTCCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTATGTAATCCAAAATATTaGGATCCACAGGGGGCATCT +
Preference number: 5 (lower is better)
Translates to: PVPFLQPVACWTQPPLLLCNPKY*DPQGAS
Trigger: AGATGCCCCCTGTGGATCCAAATATTTTGGATTACA...TAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGGACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CAA 90 bp CCAGATAGGCTAGCTCCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTGCATCTCGGGCAGTTTaGCCCTCTGGAAAAGACTTG +
Preference number: 5 (lower is better)
Translates to: PDRLAPAQTVLSSGGFPGASRAV*PSGKDL
Trigger: CAAGTCTTTTCCAGAGGGCAAAACTGCCCGAGATGC...ACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGGAGCTAGCCTATCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CAA 90 bp CCTTATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGGTTTCTCCTCACTaGGGCCGGTCCTATAATCTT +
Preference number: 5 (lower is better)
Translates to: PYQLVLGAGWAVFPMVLVWVSPH*GRSYNL
Trigger: AAGATTATAGGACCGGCCCAAGTGAGGAGAAACCCA...TACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CAA 90 bp CTGCTTCGGGATTCACGCTCATCACGGTCATCCCTGTCTATGATGGAACCGTATTGGGTTTCTCCTCACTaGGGCCGGTCCTATAATCTT +
Preference number: 5 (lower is better)
Translates to: LLRDSRSSRSSLSMMEPYWVSPH*GRSYNL
Trigger: AAGATTATAGGACCGGCCCAAGTGAGGAGAAACCCA...ATACGGTTCCATCATAGACAGGGATGACCGTGATGAGCGTGAATCCCGAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR CAA 90 bp CCCTTTCCTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTAGTGTCACTTCTCTTGGGTTCTaGCAGAATGAACAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: PFPPASSLLDTASFAASVTSLGF*QNEQED
Trigger: ATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGT...GACACTAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAGGAAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CAA 90 bp CCTTATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATTGATGATACGGACGTaGGCAGTAGTAAGGCGGACA +
Preference number: 5 (lower is better)
Translates to: PYQLVLGAGWAVFPMVLVLMIRT*AVVRRT
Trigger: TGTCCGCCTTACTACTGCCAACGTCCGTATCATCAA...TACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419610.5
CDS-3UTR CAA 90 bp CCTCAGGTAATCCAGGATCCTGGGGCACATAGACTTCTTGCTGGGTATTGGGGTTCTTCATTCTCCTTCTaGGTTTGCTCCTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: PQVIQDPGAHRLLAGYWGSSFSF*VCSSRF
Trigger: GAAGCGAGAGGAGCAAACCAAGAAGGAGAATGAAGA...ACCCCAATACCCAGCAAGAAGTCTATGTGCCCCAGGATCCTGGATTACCTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS TCA 90 bp CTAAGCACAAGAGCTCCCTTCCTAGTGATGCCACAGAATTGGATCTaGAACAGGAAAACCGCAAGAACAGCCCGCTTACAGCTCCGAAGA +
Preference number: 5 (lower is better)
Translates to: LSTRAPFLVMPQNWI*NRKTARTARLQLRR
Trigger: TCTTCGGAGCTGTAAGCGGGCTGTTCTTGCGGTTTTCCTGTTTCAGATCCAATTCTGTGGCATCACTAGGAAGGGAGCTCTTGTGCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433811.1
ENST00000491874.5
CDS TCA 90 bp AGTTCCCTGGTTGGCCTCCATGCATCCGATGGCATCTTCCAAGAGTaGAAACTCCACGCAGACATAGCCATAGTCGTAACCAACACTACT +
Preference number: 5 (lower is better)
Translates to: SSLVGLHASDGIFQE*KLHADIAIVVTNTT
Trigger: AGTAGTGTTGGTTACGACTATGGCTATGTCTGCGTGGAGTTTTCACTCTTGGAAGATGCCATCGGATGCATGGAGGCCAACCAGGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464013.5
CDS CCA 90 bp CTCTGGAAAAGACTTGCTCTGGCCATAGCCAAACATCTGGCTTCCTaGCAGCCTATGATCCACATCACGGTACTCCATGCTTCTGTAATC +
Preference number: 5 (lower is better)
Translates to: LWKRLALAIAKHLAS*QPMIHITVLHASVI
Trigger: GATTACAGAAGCATGGAGTACCGTGATGTGGATCATAGGCTGCCAGGAAGCCAGATGTTTGGCTATGGCCAGAGCAAGTCTTTTCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GCTTGGCCTCTGTCACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCGGTGGTGCCCACCAATGTTaGCCTTACATCGTTTGCAGT +
Preference number: 5 (lower is better)
Translates to: AWPLSLLLGSCRMNRKIGGAHQC*PYIVCS
Trigger: ACTGCAAACGATGTAAGGCAAACATTGGTGGGCACC...ACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGTGACAGAGGCCAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CAA 90 bp CTCATAGTCACTGTCTCCTCCATATTCACCCAAGAGGCCGATCAGTGGGTTTACGGTGCCCACCAATGTTaGCCTTACATCGTTTGCAGT +
Preference number: 5 (lower is better)
Translates to: LIVTVSSIFTQEADQWVYGAHQC*PYIVCS
Trigger: ACTGCAAACGATGTAAGGCAAACATTGGTGGGCACC...GTAAACCCACTGATCGGCCTCTTGGGTGAATATGGAGGAGACAGTGACTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TGCTTGTGCAGGTCTGACAGCTGCTGGTGTTTGATCAGAACTTCTTTATTGGGAGGTCTCTTCGGAAAGTaGGCCCTTCCCTTCGAGAAG +
Preference number: 5 (lower is better)
Translates to: CLCRSDSCWCLIRTSLLGGLFGK*ALPFEK
Trigger: CTTCTCGAAGGGAAGGGCCAACTTTCCGAAGAGACC...TCCCAATAAAGAAGTTCTGATCAAACACCAGCAGCTGTCAGACCTGCACAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGGTCTGACAGCGGGCCTGTTCTGTTCTaGATGATACGGACGTTGGCA +
Preference number: 5 (lower is better)
Translates to: DCFIFRWISRFCLCRSDSGPVLF*MIRTLA
Trigger: TGCCAACGTCCGTATCATCAAGAACAGAACAGGCCC...GCTGTCAGACCTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AGCTCCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCATTCTCCTTCTTGGTTaGCTCCTCTCGCTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: SSCSDCFIFRWISRFCLCILLLG*LLSLLG
Trigger: CCCCAGAAGCGAGAGGAGCAAACCAAGAAGGAGAAT...GCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CAA 90 bp CCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGGTATTCTCCTTCTTGGTTaGCTCCTCTCGCTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: PAQTVLSSGGFPGFACAGILLLG*LLSLLG
Trigger: CCCCAGAAGCGAGAGGAGCAAACCAAGAAGGAGAAT...ACCTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GCATGTGGTCAGAATGGTCCCCAGAATCATTTCTTCGTTTTCCAGTGGCCAGGTATTTCCAGGTTTTGCTaGTGCAGGTCTGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: ACGQNGPQNHFFVFQWPGISRFC*CRSDSC
Trigger: GCAGCTGTCAGACCTGCACAAGCAAAACCTGGAAAT...ACCTGGCCACTGGAAAACGAAGAAATGATTCTGGGGACCATTCTGACCACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR CAA 90 bp GAACAGCATCTCGGTAAGTCTCGTTGGACTGTCTTTTGCTGGTTCTTCCTGAGGATTTCCAGGTTTTGCTaGTGCAGGTCTGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: EQHLGKSRWTVFCWFFLRISRFC*CRSDSC
Trigger: GCAGCTGTCAGACCTGCACAAGCAAAACCTGGAAAT...CCTCAGGAAGAACCAGCAAAAGACAGTCCAACGAGACTTACCGAGATGCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CAA 90 bp CTCATAGTCACTGTCTCCTCCATATTCACCCAAGAGGCCGATCAGTGGGTTTACTGGACACAGCCTCCTTaGCTGCTAGTGTCGATATCT +
Preference number: 5 (lower is better)
Translates to: LIVTVSSIFTQEADQWVYWTQPP*LLVSIS
Trigger: AGATATCGACACTAGCAGCAAAGGAGGCTGTGTCCA...GTAAACCCACTGATCGGCCTCTTGGGTGAATATGGAGGAGACAGTGACTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCCAGCCAGTAGCCTGTaGGACACAGCCTCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLPASSL*DTASFA
Trigger: AGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGG...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTCCAGCCAGTAGCCTGTaGGACACAGCCTCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPPASSL*DTASFA
Trigger: AGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGG...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS TCA 90 bp AGTTCCCTGGTTGGCCTCCATGCATCCGATGGCATCTTCCAAGAGTaGAAACTCCACGCAGACATAGCCATAGTCGTAACCTGTGTTATA +
Preference number: 5 (lower is better)
Translates to: SSLVGLHASDGIFQE*KLHADIAIVVTCVI
Trigger: TATAACACAGGTTACGACTATGGCTATGTCTGCGTGGAGTTTTCACTCTTGGAAGATGCCATCGGATGCATGGAGGCCAACCAGGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000441115.5
ENST00000443081.5
ENST00000454079.5
CDS GCA 90 bp GAAGTCAACAGCGTGAGCATCCCTGTCTCTGTAGTTCATATGAGGTaGCTCCCTACCTCTATAATCCATAGAAGTACCATCTCCACCCCT +
Preference number: 5 (lower is better)
Translates to: EVNSVSIPVSVVHMR*LPTSIIHRSTISTP
Trigger: AGGGGTGGAGATGGTACTTCTATGGATTATAGAGGTAGGGAGGCACCTCATATGAACTACAGAGACAGGGATGCTCACGCTGTTGACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS GCA 90 bp GAGGGCACAATCCAGGGTTCAGAAAATGAACCAGGTGACCATGTCTaGATGTCTACTGAACTCCTTCACTTAAATCCGGCTACTCTGACC +
Preference number: 5 (lower is better)
Translates to: EGTIQGSENEPGDHV*MSTELLHLNPATLT
Trigger: GGTCAGAGTAGCCGGATTTAAGTGAAGGAGTTCAGTAGACATGCAGACATGGTCACCTGGTTCATTTTCTGAACCCTGGATTGTGCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488807.2
CDS-3UTR CAA 90 bp CTGTCACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCGGTGCCCACCAAGTCTTGAACTGGACTTaGGCTGTTCTGAAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: LSLLLGSCRMNRKIGAHQVLNWT*AVLKVC
Trigger: GCAGACTTTCAGAACAGCCAAAGTCCAGTTCAAGAC...TTGGTGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGTGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CAA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTATCCTGAAGGTCCCGTaGGGCATCTCGGGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: GETNKTRGRLYPMELVSFILKVP*GISGSF
Trigger: AAAACTGCCCGAGATGCCCAACGGGACCTTCAGGAT...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTATCCTGAAGGTCCCGTaGGGCATCTCGGGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPILKVP*GISGSF
Trigger: AAAACTGCCCGAGATGCCCAACGGGACCTTCAGGAT...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TTACGATCACTGTCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGATCCTGAAGGTCCCGTaGGGCATCTCGGGCAGTTTT +
Preference number: 5 (lower is better)
Translates to: LRSLSVSLEYLIRFLSGEILKVP*GISGSF
Trigger: AAAACTGCCCGAGATGCCCAACGGGACCTTCAGGAT...CTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGACAGTGATCGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CAA 90 bp TCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAAGACTGGGGTCTCTTCGGAAAGTaGGCCCTTCCCTTCGAGAAG +
Preference number: 5 (lower is better)
Translates to: SVSLEYLIRFLSGESKDWGLFGK*ALPFEK
Trigger: CTTCTCGAAGGGAAGGGCCAACTTTCCGAAGAGACC...CCAGTCTTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGGTCTCTTCGGAAAGTaGGCCCTTCCCTTCGAGAAG +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLGLFGK*ALPFEK
Trigger: CTTCTCGAAGGGAAGGGCCAACTTTCCGAAGAGACC...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGGTCTCTTCGGAAAGTaGGCCCTTCCCTTCGAGAAG +
Preference number: 5 (lower is better)
Translates to: GETNKTRGRLYPMELVSFGLFGK*ALPFEK
Trigger: CTTCTCGAAGGGAAGGGCCAACTTTCCGAAGAGACC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp ATGTGGTCAGAATGGTCCCCAGAATCATTTCTTCGTTTTCCAGTGGCCAGGTTTGGGCCTGTTCTGTTCTaGATGATACGGACGTTGGCA +
Preference number: 5 (lower is better)
Translates to: MWSEWSPESFLRFPVARFGPVLF*MIRTLA
Trigger: TGCCAACGTCCGTATCATCAAGAACAGAACAGGCCC...AAACCTGGCCACTGGAAAACGAAGAAATGATTCTGGGGACCATTCTGACCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR CAA 90 bp CTTCACCACACGAAGAGCTTCCGCATGGGAGTCGAGGTCAATAAAGCCATAGGTGTTGTCCTTGTCGATTaGTATCTGAAGACCAGTCTG +
Preference number: 5 (lower is better)
Translates to: LHHTKSFRMGVEVNKAIGVVLVD*YLKTSL
Trigger: CAGACTGGTCTTCAGATACAAATCGACAAGGACAAC...ACCTATGGCTTTATTGACCTCGACTCCCATGCGGAAGCTCTTCGTGTGGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419610.5
CDS-3UTR CAA 90 bp CTCCAGCCAGTAGCCTGTTGGACACAGCCTCCTTTGCTGCTAGTGTCGATATCTTTCCAGTCAGTGAGTTaGTCTTCTTCATTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LQPVACWTQPPLLLVSISFQSVS*SSSFSF
Trigger: GAAGGAGAATGAAGAAGACAAACTCACTGACTGGAA...AGATATCGACACTAGCAGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TATTCACCCAAGAGGCCGATCAGTGGGTTTACCACTTTAGGTGGAGGGGGACTCGACAGCTGCTGGTGTTaGATCAGAACTTCTTTATTG +
Preference number: 5 (lower is better)
Translates to: YSPKRPISGFTTLGGGGLDSCWC*IRTSLL
Trigger: CAATAAAGAAGTTCTGATCAAACACCAGCAGCTGTC...GAGTCCCCCTCCACCTAAAGTGGTAAACCCACTGATCGGCCTCTTGGGTGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCAGCCAGTAGCCTGTaGGACACAGCCTCCTTTGCT +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSPASSL*DTASFA
Trigger: AGCAAAGGAGGCTGTGTCCAACAGGCTACTGGCTGG...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp CTCCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGTCGTTGGACTGTCTTTaGCTGGTTCTTCCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: LLLRLFYLPVDFQVLLVQSLDCL*LVLPEA
Trigger: AGCCTCAGGAAGAACCAGCAAAAGACAGTCCAACGA...CTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GGGCCTTCGAAGGACTCCATCATTTCTCGAATATCGCTCTCTGTGATGGTGATGGCCGGTCCTATAATCTaGATCCGAAAAGGTCCAGTT +
Preference number: 5 (lower is better)
Translates to: GPSKDSIISRISLSVMVMAGPII*IRKGPV
Trigger: AACTGGACCTTTTCGGATCAAGATTATAGGACCGGC...CATCACCATCACAGAGAGCGATATTCGAGAAATGATGGAGTCCTTCGAAGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR CAA 90 bp CCAGATAGGCTAGCTCCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTGGGCACATAGACTTCTaGCTGCGATACAGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: PDRLAPAQTVLSSGGFPGGHIDF*LRYSWK
Trigger: TTTCCAACTGTATCGCAGCAAGAAGTCTATGTGCCC...ACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGGAGCTAGCCTATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS TCA 90 bp ATTCTCCGCCCTCTAGGGTCCTCTGTGTTTCCTCAGACAGGGCTCTaGGTTATACAAGCCATTTCTTTGCAATTGGACCTCAGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: ILRPLGSSVFPQTGL*VIQAISLQLDLSFL
Trigger: CAAGAAACTGAGGTCCAATTGCAAAGAAATGGCTTGTATAACTCAGAGCCCTGTCTGAGGAAACACAGAGGACCCTAGAGGGCGGAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446471.1
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGCCAGAGTGTCTCTCTaGAGCATGACTCTTAAGGGG +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLARVSL*SMTLKG
Trigger: CCCCTTAAGAGTCATGCTCAAGAGAGACACTCTGGC...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGCCAGAGTGTCTCTCTaGAGCATGACTCTTAAGGGG +
Preference number: 5 (lower is better)
Translates to: GETNKTRGRLYPMELVSFARVSL*SMTLKG
Trigger: CCCCTTAAGAGTCATGCTCAAGAGAGACACTCTGGC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGATTGTAATCCAAAATATTaGGATCCACAGGGGGCATCT +
Preference number: 5 (lower is better)
Translates to: SAGLRGWLGCFSNGAGMDCNPKY*DPQGAS
Trigger: AGATGCCCCCTGTGGATCCAAATATTTTGGATTACA...ATCCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CAA 90 bp TATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTATGGTTCAAAGGCTACACCTaGTGTTTCTCCTTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: YQLVLGAGWAVFPMVLVWFKGYT*CFSFSC
Trigger: ACAAGAGAAGGAGAAACACAAGGTGTAGCCTTTGAA...CCATACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CAA 90 bp CTCCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGGTCTTGAACTGGACTTaGGCTGTTCTGAAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: LLLRLFYLPVDFQVLLVQVLNWT*AVLKVC
Trigger: GCAGACTTTCAGAACAGCCAAAGTCCAGTTCAAGAC...CTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCTGTAATCGGTGTCTaGCCGCCCAAGAAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLSVIGV*PPKKVQ
Trigger: CTGGACTTTCTTGGGCGGCAAGACACCGATTACAGA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGCATCTCGGGCAGTTTaGCCCTCTGGAAAAGACTTG +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLASRAV*PSGKDL
Trigger: CAAGTCTTTTCCAGAGGGCAAAACTGCCCGAGATGC...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGCCGGTCCTATAATCTaGATCCTGAAGGTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: GETNKTRGRLYPMELVSFAGPII*ILKVPL
Trigger: CAACGGGACCTTCAGGATCAAGATTATAGGACCGGC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTATTAGAGTTCCCTGGTaGGCCTCCATGCATCCGATG +
Preference number: 5 (lower is better)
Translates to: GETNKTRGRLYPMELVSFIRVPW*ASMHPM
Trigger: CATCGGATGCATGGAGGCCAACCAGGGAACTCTAAT...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TTACGATCACTGTCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGATTAGAGTTCCCTGGTaGGCCTCCATGCATCCGATG +
Preference number: 5 (lower is better)
Translates to: LRSLSVSLEYLIRFLSGEIRVPW*ASMHPM
Trigger: CATCGGATGCATGGAGGCCAACCAGGGAACTCTAAT...CTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGACAGTGATCGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CAA 90 bp TGCTTGTGCAGGTCTGACAGCTGCTGGTGTTTGATCAGAACTTCTTTATTGGGAGGTGCCCACCAATGTTaGCCTTACATCGTTTGCAGT +
Preference number: 5 (lower is better)
Translates to: CLCRSDSCWCLIRTSLLGGAHQC*PYIVCS
Trigger: ACTGCAAACGATGTAAGGCAAACATTGGTGGGCACC...TCCCAATAAAGAAGTTCTGATCAAACACCAGCAGCTGTCAGACCTGCACAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGGTCTCTTCGGAAAGTaGGCCCTTCCCTTCGAGAAG +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLGLFGK*ALPFEK
Trigger: CTTCTCGAAGGGAAGGGCCAACTTTCCGAAGAGACC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTGGGCCTGTTCTGTTCTaGATGATACGGACGTTGGCA +
Preference number: 5 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPGPVLF*MIRTLA
Trigger: TGCCAACGTCCGTATCATCAAGAACAGAACAGGCCC...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTATTCTCCTTCTTGGTTaGCTCCTCTCGCTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLILLLG*LLSLLG
Trigger: CCCCAGAAGCGAGAGGAGCAAACCAAGAAGGAGAAT...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTATTCTCCTTCTTGGTTaGCTCCTCTCGCTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPILLLG*LLSLLG
Trigger: CCCCAGAAGCGAGAGGAGCAAACCAAGAAGGAGAAT...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTATTCTCCTTCTTGGTTaGCTCCTCTCGCTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: GETNKTRGRLYPMELVSFILLLG*LLSLLG
Trigger: CCCCAGAAGCGAGAGGAGCAAACCAAGAAGGAGAAT...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GCACATAGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTTCTTCATTCTCCTTCTaGGTTTGCTCCTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: AHRLLAGYWGHNKFLPRGSSFSF*VCSSRF
Trigger: GAAGCGAGAGGAGCAAACCAAGAAGGAGAATGAAGA...ACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCTATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR CAA 90 bp CCAGATAGGCTAGCTCCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTGTTCTACTCACTCTTTaGTCTGAACCCATTGTCCCA +
Preference number: 5 (lower is better)
Translates to: PDRLAPAQTVLSSGGFPGVLLTL*SEPIVP
Trigger: TGGGACAATGGGTTCAGACAAAAGAGTGAGTAGAAC...ACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGGAGCTAGCCTATCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS CCA 90 bp GAGCTACTGTTTGAGAGCTACCTTATAACAAGGCATCTGGGACTTTaGTGCAGCCCAAATGCCTTTGCCCTGGATAAAGATTCCTATAGG +
Preference number: 5 (lower is better)
Translates to: ELLFESYLITRHLGL*CSPNAFALDKDSYR
Trigger: CCTATAGGAATCTTTATCCAGGGCAAAGGCATTTGGGCTGCACCAAAGTCCCAGATGCCTTGTTATAAGGTAGCTCTCAAACAGTAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466247.1
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTAGCAAACCTTTCTTCTaGGCTCCCACGAAAAGGTCC +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLSKPFF*APTKRS
Trigger: GGACCTTTTCGTGGGAGCCAAGAAGAAAGGTTTGCT...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000266022.9
CDS-3UTR CAA 90 bp TTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGTCACTTCTCAGCAAACCTTTCTTCTaGGCTCCCACGAAAAGGTCC +
Preference number: 5 (lower is better)
Translates to: FSEAEGRLLILAWPLSLLSKPFF*APTKRS
Trigger: GGACCTTTTCGTGGGAGCCAAGAAGAAAGGTTTGCT...GAGAAGTGACAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTCTGTAATCGGTGTCTaGCCGCCCAAGAAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSSVIGV*PPKKVQ
Trigger: CTGGACTTTCTTGGGCGGCAAGACACCGATTACAGA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGCATCTCGGGCAGTTTaGCCCTCTGGAAAAGACTTG +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSASRAV*PSGKDL
Trigger: CAAGTCTTTTCCAGAGGGCAAAACTGCCCGAGATGC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp ATGTTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGTCACTTGCCGGTCCTATAATCTaGATCCTGAAGGTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: MFSEAEGRLLILAWPLSLAGPII*ILKVPL
Trigger: CAACGGGACCTTCAGGATCAAGATTATAGGACCGGC...AAGTGACAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGCCGGTCCTATAATCTaGATCCTGAAGGTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSAGPII*ILKVPL
Trigger: CAACGGGACCTTCAGGATCAAGATTATAGGACCGGC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGGGTTTCTCCTCACTaGGGCCGGTCCTATAATCTT +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLWVSPH*GRSYNL
Trigger: AAGATTATAGGACCGGCCCAAGTGAGGAGAAACCCA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCATTAGAGTTCCCTGGTaGGCCTCCATGCATCCGATG +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLIRVPW*ASMHPM
Trigger: CATCGGATGCATGGAGGCCAACCAGGGAACTCTAAT...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGGTGCCCACCAATGTTaGCCTTACATCGTTTGCAGT +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLGAHQC*PYIVCS
Trigger: ACTGCAAACGATGTAAGGCAAACATTGGTGGGCACC...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp CCTTATCAGCTGGTCTTAGGGGCTGGTTGGGCTGTTTTTCCAATGGTGCTGGTAGTTATTAATTCTTGCTaGGCCTCTGTCACTTCTCTT +
Preference number: 5 (lower is better)
Translates to: PYQLVLGAGWAVFPMVLVVINSC*ASVTSL
Trigger: AAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAAC...TACCAGCACCATTGGAAAAACAGCCCAACCAGCCCCTAAGACCAGCTGATAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000425608.5
CDS-3UTR CAA 90 bp CCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGGTTTTAGCATGATAGTTTaGCTCTCTCCATCCTGGCGT +
Preference number: 5 (lower is better)
Translates to: PAQTVLSSGGFPGFACAGFSMIV*LSPSWR
Trigger: ACGCCAGGATGGAGAGAGCAAAACTATCATGCTAAA...ACCTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTGATGATACGGACGTaGGCAGTAGTAAGGCGGACA +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLLMIRT*AVVRRT
Trigger: TGTCCGCCTTACTACTGCCAACGTCCGTATCATCAA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGGGCCTGTTCTGTTCTaGATGATACGGACGTTGGCA +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLGPVLF*MIRTLA
Trigger: TGCCAACGTCCGTATCATCAAGAACAGAACAGGCCC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGGGCCTGTTCTGTTCTaGATGATACGGACGTTGGCA +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSGPVLF*MIRTLA
Trigger: TGCCAACGTCCGTATCATCAAGAACAGAACAGGCCC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCATTCTCCTTCTTGGTTaGCTCCTCTCGCTTCTGGGG +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLILLLG*LLSLLG
Trigger: CCCCAGAAGCGAGAGGAGCAAACCAAGAAGGAGAAT...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TGCTTGTGCAGGTCTGACAGCTGCTGGTGTTTGATCAGAACTTCTTTATTGGGATCTTCATTCTCCTTCTaGGTTTGCTCCTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: CLCRSDSCWCLIRTSLLGSSFSF*VCSSRF
Trigger: GAAGCGAGAGGAGCAAACCAAGAAGGAGAATGAAGA...TCCCAATAAAGAAGTTCTGATCAAACACCAGCAGCTGTCAGACCTGCACAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTATTTCCAGGTTTTGCTaGTGCAGGTCTGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLISRFC*CRSDSC
Trigger: GCAGCTGTCAGACCTGCACAAGCAAAACCTGGAAAT...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTCATAATATTTCCAGGTTTTGCTaGTGCAGGTCTGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: RLLAGYWGHNKFLPRGHNISRFC*CRSDSC
Trigger: GCAGCTGTCAGACCTGCACAAGCAAAACCTGGAAAT...ATTATGACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGGACACAGCCTCCTTaGCTGCTAGTGTCGATATCT +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLWTQPP*LLVSIS
Trigger: AGATATCGACACTAGCAGCAAAGGAGGCTGTGTCCA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGGACACAGCCTCCTTaGCTGCTAGTGTCGATATCT +
Preference number: 5 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPWTQPP*LLVSIS
Trigger: AGATATCGACACTAGCAGCAAAGGAGGCTGTGTCCA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTCGTTGGACTGTCTTTaGCTGGTTCTTCCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPSLDCL*LVLPEA
Trigger: AGCCTCAGGAAGAACCAGCAAAAGACAGTCCAACGA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTCGTTGGACTGTCTTTaGCTGGTTCTTCCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: GETNKTRGRLYPMELVSFSLDCL*LVLPEA
Trigger: AGCCTCAGGAAGAACCAGCAAAAGACAGTCCAACGA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp CCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGGTAGCAAACCTTTCTTCTaGGCTCCCACTGTAGAAACA +
Preference number: 5 (lower is better)
Translates to: PAQTVLSSGGFPGFACAGSKPFF*APTVET
Trigger: TGTTTCTACAGTGGGAGCCAAGAAGAAAGGTTTGCT...ACCTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CAA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGTCTTGAACTGGACTTaGGCTGTTCTGAAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: GETNKTRGRLYPMELVSFVLNWT*AVLKVC
Trigger: GCAGACTTTCAGAACAGCCAAAGTCCAGTTCAAGAC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GACACAGCCTCCTTTGCTGCTAGTGTCGATATCTTCTTTATCAACAAGTTTACGTGGGTTTCTCCTCACTaGGGCCGGTCCTATAATCTT +
Preference number: 5 (lower is better)
Translates to: DTASFAASVDIFFINKFTWVSPH*GRSYNL
Trigger: AAGATTATAGGACCGGCCCAAGTGAGGAGAAACCCA...CGTAAACTTGTTGATAAAGAAGATATCGACACTAGCAGCAAAGGAGGCTGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CAA 90 bp CCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGGTTCCAGGGTAACTTCTTaGTCCTGGATCATTAGAGTT +
Preference number: 5 (lower is better)
Translates to: PAQTVLSSGGFPGFACAGSRVTS*SWIIRV
Trigger: AACTCTAATGATCCAGGACAAAGAAGTTACCCTGGA...ACCTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CAA 90 bp CTTGCTTGGCCTCTGTCACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCTTTGCCTTACATCGTTaGCAGTACCAAAAATCCAGG +
Preference number: 5 (lower is better)
Translates to: LAWPLSLLLGSCRMNRKIFALHR*QYQKSR
Trigger: CCTGGATTTTTGGTACTGCAAACGATGTAAGGCAAA...GATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGTGACAGAGGCCAAGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CAA 90 bp GTAATCCAGGATCCTGGGGCACATAGACTTCTTGCTGCGATACAGTTGGAAACATTTGCCTTACATCGTTaGCAGTACCAAAAATCCAGG +
Preference number: 5 (lower is better)
Translates to: VIQDPGAHRLLAAIQLETFALHR*QYQKSR
Trigger: CCTGGATTTTTGGTACTGCAAACGATGTAAGGCAAA...TGTTTCCAACTGTATCGCAGCAAGAAGTCTATGTGCCCCAGGATCCTGGATTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGGTGCCCACCAATGTTaGCCTTACATCGTTTGCAGT +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLGAHQC*PYIVCS
Trigger: ACTGCAAACGATGTAAGGCAAACATTGGTGGGCACC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AGCTCCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCACTTCTCTTGGGTTCTaGCAGAATGAACAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: SSCSDCFIFRWISRFCLCTSLGF*QNEQED
Trigger: ATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGT...GCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TGCTTGTGCAGGTCTGACAGCTGCTGGTGTTTGATCAGAACTTCTTTATTGGGATTTAGCATGATAGTTTaGCTCTCTCCATCCTGGCGT +
Preference number: 5 (lower is better)
Translates to: CLCRSDSCWCLIRTSLLGFSMIV*LSPSWR
Trigger: ACGCCAGGATGGAGAGAGCAAAACTATCATGCTAAA...TCCCAATAAAGAAGTTCTGATCAAACACCAGCAGCTGTCAGACCTGCACAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTTGATGATACGGACGTaGGCAGTAGTAAGGCGGACA +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLLMIRT*AVVRRT
Trigger: TGTCCGCCTTACTACTGCCAACGTCCGTATCATCAA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp ATGTGGTCAGAATGGTCCCCAGAATCATTTCTTCGTTTTCCAGTGGCCAGGTTTGTTGTCCTTGTCGATTaGTATCTGAAGACCAGTCTG +
Preference number: 5 (lower is better)
Translates to: MWSEWSPESFLRFPVARFVVLVD*YLKTSL
Trigger: CAGACTGGTCTTCAGATACAAATCGACAAGGACAAC...AAACCTGGCCACTGGAAAACGAAGAAATGATTCTGGGGACCATTCTGACCACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR CAA 90 bp GGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTCATAATAGTAGCCAGTAGCTTTCCTTCTTGCTACTaGACTTTCCTTGACTGGTGG +
Preference number: 5 (lower is better)
Translates to: GIGVIISSCQGVIIVASSFPSCY*TFLDWW
Trigger: CCACCAGTCAAGGAAAGTCAAGTAGCAAGAAGGAAA...GCTACTGGCTACTATTATGACCCCTTGGCAGGAACTTATTATGACCCCAATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCTTCATTCTCCTTCTaGGTTTGCTCCTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLSSFSF*VCSSRF
Trigger: GAAGCGAGAGGAGCAAACCAAGAAGGAGAATGAAGA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp CCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGGTTTCCAGTCAGTGAGTTaGTCTTCTTCATTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PAQTVLSSGGFPGFACAGFQSVS*SSSFSF
Trigger: GAAGGAGAATGAAGAAGACAAACTCACTGACTGGAA...ACCTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CAA 90 bp ATCACGGTCATCCCTGTCTATGATGGAACCGTATCTTCCACTACGCTCTGTTCTGACAGCTGCTGGTGTTaGATCAGAACTTCTTTATTG +
Preference number: 5 (lower is better)
Translates to: ITVIPVYDGTVSSTTLCSDSCWC*IRTSLL
Trigger: CAATAAAGAAGTTCTGATCAAACACCAGCAGCTGTC...AGAACAGAGCGTAGTGGAAGATACGGTTCCATCATAGACAGGGATGACCGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTATTTCCAGGTTTTGCTaGTGCAGGTCTGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSISRFC*CRSDSC
Trigger: GCAGCTGTCAGACCTGCACAAGCAAAACCTGGAAAT...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCATTTCCAGGTTTTGCTaGTGCAGGTCTGACAGCTGC +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLISRFC*CRSDSC
Trigger: GCAGCTGTCAGACCTGCACAAGCAAAACCTGGAAAT...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTGGACACAGCCTCCTTaGCTGCTAGTGTCGATATCT +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLWTQPP*LLVSIS
Trigger: AGATATCGACACTAGCAGCAAAGGAGGCTGTGTCCA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TCACTGTCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAATGGACACAGCCTCCTTaGCTGCTAGTGTCGATATCT +
Preference number: 5 (lower is better)
Translates to: SLSVSLEYLIRFLSGESKWTQPP*LLVSIS
Trigger: AGATATCGACACTAGCAGCAAAGGAGGCTGTGTCCA...TTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGACAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTCGTTGGACTGTCTTTaGCTGGTTCTTCCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLSLDCL*LVLPEA
Trigger: AGCCTCAGGAAGAACCAGCAAAAGACAGTCCAACGA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp CCTGCTCAGACTGTTTTATCTTCCGGTGGATTTCCAGGTTTTGCTTGTGCAGGTTGTATCCCATGGAACTaGTCTCCTTTCTTAATCGAG +
Preference number: 5 (lower is better)
Translates to: PAQTVLSSGGFPGFACAGCIPWN*SPFLIE
Trigger: CTCGATTAAGAAAGGAGACAAGTTCCATGGGATACA...ACCTGCACAAGCAAAACCTGGAAATCCACCGGAAGATAAAACAGTCTGAGCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CAA 90 bp CTGGGGCACATAGACTTCTTGCTGCGATACAGTTGGAAACAAGTAAGTCTACAGAAAACAAGAGGGAGGTaGTATCCCATGGAACTTGTC +
Preference number: 5 (lower is better)
Translates to: LGHIDFLLRYSWKQVSLQKTRGR*YPMELV
Trigger: GACAAGTTCCATGGGATACAACCTCCCTCTTGTTTT...CTGTAGACTTACTTGTTTCCAACTGTATCGCAGCAAGAAGTCTATGTGCCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS GCA 90 bp CTACTGTTTGAGAGCTACCTTATAACAAGGCATCTGGGACTTTGGTaGAGCCCAAATGCCTTTGCCCTGGATAAAGATTCCTATAGGAAA +
Preference number: 5 (lower is better)
Translates to: LLFESYLITRHLGLW*SPNAFALDKDSYRK
Trigger: TTTCCTATAGGAATCTTTATCCAGGGCAAAGGCATTTGGGCTGCACCAAAGTCCCAGATGCCTTGTTATAAGGTAGCTCTCAAACAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466247.1
CDS GCA 90 bp TCTGTCACTTCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCGGTaGCCACCAATGTTTGCCTTACACTGTAAGGAAGAAGGAAATCAA +
Preference number: 5 (lower is better)
Translates to: SVTSLGFLQNEQEDR*PPMFALHCKEEGNQ
Trigger: TTGATTTCCTTCTTCCTTACAGTGTAAGGCAAACATTGGTGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGTGACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466247.1
CDS CCA 90 bp CTTATCTTGGTCTTGAACTGGACTTTGGCTGTTCTGAAAGTCTGCTaGAGACTCATGTTCAAAGGCTACACCTTGTGTTTCTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: LILVLNWTLAVLKVC*RLMFKGYTLCFSFS
Trigger: AGAGAAGGAGAAACACAAGGTGTAGCCTTTGAACATGAGTCTCCAGCAGACTTTCAGAACAGCCAAAGTCCAGTTCAAGACCAAGATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GTATGGATGTTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGGCCTCTAAAGTCTACTaGTGTTCCGTCTTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: VWMFSEAEGRLLILAWPLASKVY*CSVFVS
Trigger: AGAGACAAAGACGGAACACAAGTAGACTTTAGAGGC...CAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAACATCCATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CAA 90 bp CTGTCCACTTTTTCAAGAGCAACACTGTTCTTACCTGTATTGCCACAAGGCACTGCCTCTAAAGTCTACTaGTGTTCCGTCTTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: LSTFSRATLFLPVLPQGTASKVY*CSVFVS
Trigger: AGAGACAAAGACGGAACACAAGTAGACTTTAGAGGC...AGTGCCTTGTGGCAATACAGGTAAGAACAGTGTTGCTCTTGAAAAAGTGGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGTCTTGAACTGGACTTaGGCTGTTCTGAAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLVLNWT*AVLKVC
Trigger: GCAGACTTTCAGAACAGCCAAAGTCCAGTTCAAGAC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGTCACTTCTCTTGTCCAGGGTAACTTCTTaGTCCTGGATCATTAGAGTT +
Preference number: 5 (lower is better)
Translates to: SEAEGRLLILAWPLSLLLSRVTS*SWIIRV
Trigger: AACTCTAATGATCCAGGACAAAGAAGTTACCCTGGA...CAAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CAA 90 bp AGACTTCTTGCTGGGTATTGGGGTCATAATAAGTTCCTGCCAAGGGGTCATAATTTTAGCATGATAGTTTaGCTCTCTCCATCCTGGCGT +
Preference number: 5 (lower is better)
Translates to: RLLAGYWGHNKFLPRGHNFSMIV*LSPSWR
Trigger: ACGCCAGGATGGAGAGAGCAAAACTATCATGCTAAA...ATTATGACCCCTTGGCAGGAACTTATTATGACCCCAATACCCAGCAAGAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000434592.5
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTTAGCATGATAGTTTaGCTCTCTCCATCCTGGCGT +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLFSMIV*LSPSWR
Trigger: ACGCCAGGATGGAGAGAGCAAAACTATCATGCTAAA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGTTGTCCTTGTCGATTaGTATCTGAAGACCAGTCTG +
Preference number: 5 (lower is better)
Translates to: GETNKTRGRLYPMELVSFVVLVD*YLKTSL
Trigger: CAGACTGGTCTTCAGATACAAATCGACAAGGACAAC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTTCCTTCTTGCTACTaGACTTTCCTTGACTGGTGG +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLFPSCY*TFLDWW
Trigger: CCACCAGTCAAGGAAAGTCAAGTAGCAAGAAGGAAA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTTTCCTTCTTGCTACTaGACTTTCCTTGACTGGTGG +
Preference number: 5 (lower is better)
Translates to: GETNKTRGRLYPMELVSFFPSCY*TFLDWW
Trigger: CCACCAGTCAAGGAAAGTCAAGTAGCAAGAAGGAAA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTCTTCATTCTCCTTCTaGGTTTGCTCCTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLSSFSF*VCSSRF
Trigger: GAAGCGAGAGGAGCAAACCAAGAAGGAGAATGAAGA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTCTTCATTCTCCTTCTaGGTTTGCTCCTCTCGCTTC +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSSSFSF*VCSSRF
Trigger: GAAGCGAGAGGAGCAAACCAAGAAGGAGAATGAAGA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TGCTTGTGCAGGTCTGACAGCTGCTGGTGTTTGATCAGAACTTCTTTATTGGGATTCCAGTCAGTGAGTTaGTCTTCTTCATTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: CLCRSDSCWCLIRTSLLGFQSVS*SSSFSF
Trigger: GAAGGAGAATGAAGAAGACAAACTCACTGACTGGAA...TCCCAATAAAGAAGTTCTGATCAAACACCAGCAGCTGTCAGACCTGCACAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TGCTTGTGCAGGTCTGACAGCTGCTGGTGTTTGATCAGAACTTCTTTATTGGGATGTATCCCATGGAACTaGTCTCCTTTCTTAATCGAG +
Preference number: 5 (lower is better)
Translates to: CLCRSDSCWCLIRTSLLGCIPWN*SPFLIE
Trigger: CTCGATTAAGAAAGGAGACAAGTTCCATGGGATACA...TCCCAATAAAGAAGTTCTGATCAAACACCAGCAGCTGTCAGACCTGCACAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTAAAACAAGAGGGAGGTaGTATCCCATGGAACTTGTC +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLKTRGR*YPMELV
Trigger: GACAAGTTCCATGGGATACAACCTCCCTCTTGTTTT...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGCCGGTCCTATAATCTaGATCCGAAAAGGTCCAGTT +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSAGPII*IRKGPV
Trigger: AACTGGACCTTTTCGGATCAAGATTATAGGACCGGC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422955.5
CDS-3UTR CAA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTAGCAAACCTTTCTTCTaGGCTCCCACTGTAGAAACA +
Preference number: 5 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPSKPFF*APTVET
Trigger: TGTTTCTACAGTGGGAGCCAAGAAGAAAGGTTTGCT...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443081.5
ENST00000454079.5
CDS TCA 90 bp TCTTTAAATTCCATACAAGATCCCATCTCTCTGCCCCTAAAATCCTaGTCAGTCCTAGATCGGTGTCTACCTCTGAAATCTGAATGTGGC +
Preference number: 5 (lower is better)
Translates to: SLNSIQDPISLPLKS*SVLDRCLPLKSECG
Trigger: GCCACATTCAGATTTCAGAGGTAGACACCGATCTAGGACTGATCAGGATTTTAGGGGCAGAGAGATGGGATCTTGTATGGAATTTAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGCCTCTAAAGTCTACTaGTGTTCCGTCTTTGTCTCT +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSASKVY*CSVFVS
Trigger: AGAGACAAAGACGGAACACAAGTAGACTTTAGAGGC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGTAATCCAAAATATTaGGATCCACAGGGGGCATCT +
Preference number: 5 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPCNPKY*DPQGAS
Trigger: AGATGCCCCCTGTGGATCCAAATATTTTGGATTACA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTTCAAAGGCTACACCTaGTGTTTCTCCTTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: GETNKTRGRLYPMELVSFFKGYT*CFSFSC
Trigger: ACAAGAGAAGGAGAAACACAAGGTGTAGCCTTTGAA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TTTCTGGAGAGTCAAAAGACTGGAGCTTTTCCCTGCGATCATTTCCTCTTCCTTTTCAAAGGCTACACCTaGTGTTTCTCCTTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: FLESQKTGAFPCDHFLFLFKGYT*CFSFSC
Trigger: ACAAGAGAAGGAGAAACACAAGGTGTAGCCTTTGAA...AAGGAAGAGGAAATGATCGCAGGGAAAAGCTCCAGTCTTTTGACTCTCCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CAA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTCCAGGGTAACTTCTTaGTCCTGGATCATTAGAGTT +
Preference number: 5 (lower is better)
Translates to: GETNKTRGRLYPMELVSFSRVTS*SWIIRV
Trigger: AACTCTAATGATCCAGGACAAAGAAGTTACCCTGGA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTGCCTTACATCGTTaGCAGTACCAAAAATCCAGG +
Preference number: 5 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPFALHR*QYQKSR
Trigger: CCTGGATTTTTGGTACTGCAAACGATGTAAGGCAAA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTTGCCTTACATCGTTaGCAGTACCAAAAATCCAGG +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLFALHR*QYQKSR
Trigger: CCTGGATTTTTGGTACTGCAAACGATGTAAGGCAAA...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GAATCATTTCTTCGTTTTCCAGTGGCCAGGTTTACAGCTACCATCTTCCCATCATTTGCCTTACATCGTTaGCAGTACCAAAAATCCAGG +
Preference number: 5 (lower is better)
Translates to: ESFLRFPVARFTATIFPSFALHR*QYQKSR
Trigger: CCTGGATTTTTGGTACTGCAAACGATGTAAGGCAAA...TGATGGGAAGATGGTAGCTGTAAACCTGGCCACTGGAAAACGAAGAAATGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434592.5
CDS-3UTR CAA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTACTTCTCTTGGGTTCTaGCAGAATGAACAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: GETNKTRGRLYPMELVSFTSLGF*QNEQED
Trigger: ATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGT...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTACTTCTCTTGGGTTCTaGCAGAATGAACAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLTSLGF*QNEQED
Trigger: ATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGT...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTTTAGCATGATAGTTTaGCTCTCTCCATCCTGGCGT +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLFSMIV*LSPSWR
Trigger: ACGCCAGGATGGAGAGAGCAAAACTATCATGCTAAA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGTTGTCCTTGTCGATTaGTATCTGAAGACCAGTCTG +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLVVLVD*YLKTSL
Trigger: CAGACTGGTCTTCAGATACAAATCGACAAGGACAAC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTTTCCTTCTTGCTACTaGACTTTCCTTGACTGGTGG +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSFPSCY*TFLDWW
Trigger: CCACCAGTCAAGGAAAGTCAAGTAGCAAGAAGGAAA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTCCAGTCAGTGAGTTaGTCTTCTTCATTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPFQSVS*SSSFSF
Trigger: GAAGGAGAATGAAGAAGACAAACTCACTGACTGGAA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTGACAGCTGCTGGTGTTaGATCAGAACTTCTTTATTG +
Preference number: 5 (lower is better)
Translates to: RRDKQNKREVVSHGTCLLDSCWC*IRTSLL
Trigger: CAATAAAGAAGTTCTGATCAAACACCAGCAGCTGTC...AAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGACAGCTGCTGGTGTTaGATCAGAACTTCTTTATTG +
Preference number: 5 (lower is better)
Translates to: GETNKTRGRLYPMELVSFDSCWC*IRTSLL
Trigger: CAATAAAGAAGTTCTGATCAAACACCAGCAGCTGTC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTGTATCCCATGGAACTaGTCTCCTTTCTTAATCGAG +
Preference number: 5 (lower is better)
Translates to: GETNKTRGRLYPMELVSFCIPWN*SPFLIE
Trigger: CTCGATTAAGAAAGGAGACAAGTTCCATGGGATACA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTAAAACAAGAGGGAGGTaGTATCCCATGGAACTTGTC +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSKTRGR*YPMELV
Trigger: GACAAGTTCCATGGGATACAACCTCCCTCTTGTTTT...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCAAAACAAGAGGGAGGTaGTATCCCATGGAACTTGTC +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLKTRGR*YPMELV
Trigger: GACAAGTTCCATGGGATACAACCTCCCTCTTGTTTT...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS GCA 90 bp CTGTGTTTCCTCAGACAGGGCTCTGAGTTATACAAGCCATTTCTTTaGAATTGGACCTCAGTTTCTTGCTTGAATCCATACATCTGTCAA +
Preference number: 5 (lower is better)
Translates to: LCFLRQGSELYKPFL*NWTSVSCLNPYICQ
Trigger: TTGACAGATGTATGGATTCAAGCAAGAAACTGAGGTCCAATTGCAAAGAAATGGCTTGTATAACTCAGAGCCCTGTCTGAGGAAACACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446471.1
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTGTAATCCAAAATATTaGGATCCACAGGGGGCATCT +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSCNPKY*DPQGAS
Trigger: AGATGCCCCCTGTGGATCCAAATATTTTGGATTACA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTAGAATGTTCTCTATCTaGTGTAGAGGGCTGAATGTA +
Preference number: 5 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPRMFSI*CRGLNV
Trigger: TACATTCAGCCCTCTACACAAGATAGAGAACATTCT...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp CTGGTATGGATGTTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTAGAATGTTCTCTATCTaGTGTAGAGGGCTGAATGTA +
Preference number: 5 (lower is better)
Translates to: LVWMFSEAEGRLLILAWPRMFSI*CRGLNV
Trigger: TACATTCAGCCCTCTACACAAGATAGAGAACATTCT...AGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAACATCCATACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CAA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTAGAATGTTCTCTATCTaGTGTAGAGGGCTGAATGTA +
Preference number: 5 (lower is better)
Translates to: GETNKTRGRLYPMELVSFRMFSI*CRGLNV
Trigger: TACATTCAGCCCTCTACACAAGATAGAGAACATTCT...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTTCAAAGGCTACACCTaGTGTTTCTCCTTCTCTTGT +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSFKGYT*CFSFSC
Trigger: ACAAGAGAAGGAGAAACACAAGGTGTAGCCTTTGAA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000266022.9
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp ATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGGAGTACTTAGCCGGTCCTATAATCTaGATCCTGAAGGTCCCGTTG +
Preference number: 5 (lower is better)
Translates to: ISSLSTSLRSLSVSLEYLAGPII*ILKVPL
Trigger: CAACGGGACCTTCAGGATCAAGATTATAGGACCGGC...TAAGTACTCCAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTCCAGGGTAACTTCTTaGTCCTGGATCATTAGAGTT +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLSRVTS*SWIIRV
Trigger: AACTCTAATGATCCAGGACAAAGAAGTTACCCTGGA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTCCAGGGTAACTTCTTaGTCCTGGATCATTAGAGTT +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSSRVTS*SWIIRV
Trigger: AACTCTAATGATCCAGGACAAAGAAGTTACCCTGGA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTTTGCCTTACATCGTTaGCAGTACCAAAAATCCAGG +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSFALHR*QYQKSR
Trigger: CCTGGATTTTTGGTACTGCAAACGATGTAAGGCAAA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTACTTCTCTTGGGTTCTaGCAGAATGAACAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSTSLGF*QNEQED
Trigger: ATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGT...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp ATGTTTTCTGAGGCTGAGGGTAGGTTATTAATTCTTGCTTGGCCTCTGTCACTTACTTCTCTTGGGTTCTaGCAGAATGAACAGGAAGAT +
Preference number: 5 (lower is better)
Translates to: MFSEAEGRLLILAWPLSLTSLGF*QNEQED
Trigger: ATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGT...AAGTGACAGAGGCCAAGCAAGAATTAATAACCTACCCTCAGCCTCAGAAAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425608.5
CDS-3UTR CAA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTGTTATTAATTCTTGCTaGGCCTCTGTCACTTCTCTT +
Preference number: 5 (lower is better)
Translates to: GETNKTRGRLYPMELVSFVINSC*ASVTSL
Trigger: AAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAAC...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TTTCTGGAGAGTCAAAAGACTGGAGCTTTTCCCTGCGATCATTTCCTCTTCCTTGTTATTAATTCTTGCTaGGCCTCTGTCACTTCTCTT +
Preference number: 5 (lower is better)
Translates to: FLESQKTGAFPCDHFLFLVINSC*ASVTSL
Trigger: AAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAAC...AAGGAAGAGGAAATGATCGCAGGGAAAAGCTCCAGTCTTTTGACTCTCCAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TCAGTTTCCCTGGAGTACTTAATCCGTTTCCTTTCTGGAGAGTCAAAAGACTGGGTTATTAATTCTTGCTaGGCCTCTGTCACTTCTCTT +
Preference number: 5 (lower is better)
Translates to: SVSLEYLIRFLSGESKDWVINSC*ASVTSL
Trigger: AAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAAC...CCAGTCTTTTGACTCTCCAGAAAGGAAACGGATTAAGTACTCCAGGGAAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000434592.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTTCCAGTCAGTGAGTTaGTCTTCTTCATTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSFQSVS*SSSFSF
Trigger: GAAGGAGAATGAAGAAGACAAACTCACTGACTGGAA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTTCCAGTCAGTGAGTTaGTCTTCTTCATTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLFQSVS*SSSFSF
Trigger: GAAGGAGAATGAAGAAGACAAACTCACTGACTGGAA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGACAGCTGCTGGTGTTaGATCAGAACTTCTTTATTG +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLDSCWC*IRTSLL
Trigger: CAATAAAGAAGTTCTGATCAAACACCAGCAGCTGTC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TTGCTGCTAGTGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCGTTGGACTGTCTTTaGCTGGTTCTTCCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: LLLVSISSLSTSLRSLSVSLDCL*LVLPEA
Trigger: AGCCTCAGGAAGAACCAGCAAAAGACAGTCCAACGA...AACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACACTAGCAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCTGTATCCCATGGAACTaGTCTCCTTTCTTAATCGAG +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLCIPWN*SPFLIE
Trigger: CTCGATTAAGAAAGGAGACAAGTTCCATGGGATACA...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTTGTATCCCATGGAACTaGTCTCCTTTCTTAATCGAG +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSCIPWN*SPFLIE
Trigger: CTCGATTAAGAAAGGAGACAAGTTCCATGGGATACA...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000421682.1
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTTTATTGTCCAGAGAGTTaGAAATCTACACACCAGCAT +
Preference number: 5 (lower is better)
Translates to: GETNKTRGRLYPMELVSFYCPES*KSTHQH
Trigger: ATGCTGGTGTGTAGATTTCAAACTCTCTGGACAATA...AAAGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCCTTATTGTCCAGAGAGTTaGAAATCTACACACCAGCAT +
Preference number: 5 (lower is better)
Translates to: KERQTKQEGGCIPWNLSPYCPES*KSTHQH
Trigger: ATGCTGGTGTGTAGATTTCAAACTCTCTGGACAATA...AGGAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp GCAAAGCAGACAAGCCAGTTTATTCCAGTCAGTGAGTTTGTCTTCTTCATTCTCAGAATGTTCTCTATCTaGTGTAGAGGGCTGAATGTA +
Preference number: 5 (lower is better)
Translates to: AKQTSQFIPVSEFVFFILRMFSI*CRGLNV
Trigger: TACATTCAGCCCTCTACACAAGATAGAGAACATTCT...GAGAATGAAGAAGACAAACTCACTGACTGGAATAAACTGGCTTGTCTGCTTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CAA 90 bp GGAGGTTGTATCCCATGGAACTTGTCTCCTTTCTTAATCGAGTTCTTTATATCGTCCAGGGTAACTTCTTaGTCCTGGATCATTAGAGTT +
Preference number: 5 (lower is better)
Translates to: GGCIPWNLSPFLIEFFISSRVTS*SWIIRV
Trigger: AACTCTAATGATCCAGGACAAAGAAGTTACCCTGGA...CGATATAAAGAACTCGATTAAGAAAGGAGACAAGTTCCATGGGATACAACCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CAA 90 bp GAAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTGTTATTAATTCTTGCTaGGCCTCTGTCACTTCTCTT +
Preference number: 5 (lower is better)
Translates to: EKERQTKQEGGCIPWNLSVINSC*ASVTSL
Trigger: AAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAAC...AGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp AAAAGGAGAGACAAACAAAACAAGAGGGAGGTTGTATCCCATGGAACTTGTCTCGTTATTAATTCTTGCTaGGCCTCTGTCACTTCTCTT +
Preference number: 5 (lower is better)
Translates to: KRRDKQNKREVVSHGTCLVINSC*ASVTSL
Trigger: AAGAGAAGTGACAGAGGCCAAGCAAGAATTAATAAC...GAGACAAGTTCCATGGGATACAACCTCCCTCTTGTTTTGTTTGTCTCTCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000442092.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGGAGTTTTCCTTCTTGCTACTaGACTTTCCTTGACTGGTGG +
Preference number: 5 (lower is better)
Translates to: CRYLLYQQVYDHCQFPWSFPSCY*TFLDWW
Trigger: CCACCAGTCAAGGAAAGTCAAGTAGCAAGAAGGAAA...ACTCCAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS CCA 90 bp TTCCTCAGACAGGGCTCTGAGTTATACAAGCCATTTCTTTGCAATTaGACCTCAGTTTCTTGCTTGAATCCATACATCTGTCAAATAATG +
Preference number: 5 (lower is better)
Translates to: FLRQGSELYKPFLCN*TSVSCLNPYICQIM
Trigger: CATTATTTGACAGATGTATGGATTCAAGCAAGAAACTGAGGTCCAATTGCAAAGAAATGGCTTGTATAACTCAGAGCCCTGTCTGAGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446471.1
CDS-3UTR CAA 90 bp TATCCCATGGAACTTGTCTCCTTTCTTAATCGAGTTCTTTATATCGAGCAAACAGTTGTCCTTGTCGATTaGTATCTGAAGACCAGTCTG +
Preference number: 5 (lower is better)
Translates to: YPMELVSFLNRVLYIEQTVVLVD*YLKTSL
Trigger: CAGACTGGTCTTCAGATACAAATCGACAAGGACAAC...TGTTTGCTCGATATAAAGAACTCGATTAAGAAAGGAGACAAGTTCCATGGGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGGAGTGACAGCTGCTGGTGTTaGATCAGAACTTCTTTATTG +
Preference number: 5 (lower is better)
Translates to: CRYLLYQQVYDHCQFPWSDSCWC*IRTSLL
Trigger: CAATAAAGAAGTTCTGATCAAACACCAGCAGCTGTC...ACTCCAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419610.5
ENST00000454079.5
CDS CCA 90 bp ATGTTCTCTATCTTGTGTAGAGGGCTGAATGTAATCCAAAATATTTaGATCCACAGGGGGCATCTCCCTATCTTTAAATTCCATACAAGA +
Preference number: 5 (lower is better)
Translates to: MFSILCRGLNVIQNI*IHRGHLPIFKFHTR
Trigger: TCTTGTATGGAATTTAAAGATAGGGAGATGCCCCCTGTGGATCCAAATATTTTGGATTACATTCAGCCCTCTACACAAGATAGAGAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS-3UTR CAA 90 bp TTGCTGCTAGTGTCGATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTCTTGCTGCGATACAGTaGGAAACAAGTAAGTCTACA +
Preference number: 5 (lower is better)
Translates to: LLLVSISSLSTSLRSLSVLAAIQ*ETSKST
Trigger: TGTAGACTTACTTGTTTCCAACTGTATCGCAGCAAG...AACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACACTAGCAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS-3UTR CAA 90 bp ATATCTTCTTTATCAACAAGTTTACGATCACTGTCAGTTTCCCTGGAGTACTTACTGTTCTTACCTGTATaGCCACAAGGCACTGATTTT +
Preference number: 5 (lower is better)
Translates to: ISSLSTSLRSLSVSLEYLLFLPV*PQGTDF
Trigger: AAAATCAGTGCCTTGTGGCAATACAGGTAAGAACAG...TAAGTACTCCAGGGAAACTGACAGTGATCGTAAACTTGTTGATAAAGAAGATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000454079.5
CDS GCA 72 bp GCCGCGGACACCGGAACTTCCTCCGCGCGGGGCCACTaGTACCACAAAGGCGCCGCGCCGCTGCCTTCAGCG +
Preference number: 6 (lower is better)
Translates to: AADTGTSSARGH*YHKGAAPLPSA
Trigger: CGCTGAAGGCAGCGGCGCGGCGCCTTTGTGGTAGCAGTGGCCCCGCGCGGAGGAAGTTCCGGTGTCCGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419610.5
ENST00000441115.5
ENST00000442092.5
ENST00000443081.5
CDS GCA 72 bp CGCGGGGCCACTGCTACCACAAAGGCGCCGCGCCGCTaGCTTCAGCGCTCGGCCCGCTGGGAGATGAAGTAC +
Preference number: 6 (lower is better)
Translates to: RGATATTKAPRR*LQRSARWEMKY
Trigger: GTACTTCATCTCCCAGCGGGCCGAGCGCTGAAGGCAGCGGCGCGGCGCCTTTGTGGTAGCAGTGGCCCCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419610.5
ENST00000442092.5
ENST00000443081.5
CDS CCA 72 bp AAGGCGCCGCGCCGCTGCCTTCAGCGCTCGGCCCGCTaGGAGATGAAGTACAGCTGCCGGTCCCGCAGACTC +
Preference number: 6 (lower is better)
Translates to: KAPRRCLQRSAR*EMKYSCRSRRL
Trigger: GAGTCTGCGGGACCGGCAGCTGTACTTCATCTCCCAGCGGGCCGAGCGCTGAAGGCAGCGGCGCGGCGCCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000442092.5
ENST00000443081.5
CDS CAA 72 bp CAGGTTCTACCGCCCCGACGACCGGGCTCGGAGCTCTaGTGCCCTCCGGTCCAGCGGAGCCTCCCTTGTGTC +
Preference number: 6 (lower is better)
Translates to: QVLPPRRPGSEL*CPPVQRSLPCV
Trigger: GACACAAGGGAGGCTCCGCTGGACCGGAGGGCACAAGAGCTCCGAGCCCGGTCGTCGGGGCGGTAGAACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433811.1
ENST00000491874.5
CDS TCA 72 bp CGCGCCGCTGCCTTCAGCGCTCGGCCCGCTGGGAGATaGAGTACAGCTGCCGGTCCCGCAGACTCTTACTCC +
Preference number: 6 (lower is better)
Translates to: RAAAFSARPAGR*STAAGPADSYS
Trigger: GGAGTAAGAGTCTGCGGGACCGGCAGCTGTACTTCATCTCCCAGCGGGCCGAGCGCTGAAGGCAGCGGCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442092.5
CDS GCA 72 bp GTTCTACCGCCCCGACGACCGGGCTCGGAGCTCTTGTaGCCTCCGGTCCAGCGGAGCCTCCCTTGTGTCTGT +
Preference number: 6 (lower is better)
Translates to: VLPPRRPGSELL*PPVQRSLPCVC
Trigger: ACAGACACAAGGGAGGCTCCGCTGGACCGGAGGGCACAAGAGCTCCGAGCCCGGTCGTCGGGGCGGTAGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433811.1
ENST00000491874.5
CDS GCA 72 bp CTTCAGCGCTCGGCCCGCTGGGAGATGAAGTACAGCTaGCGGTCCCGCAGACTCTTACTCCCGCCGTGCCCC +
Preference number: 6 (lower is better)
Translates to: LQRSARWEMKYS*RSRRLLLPPCP
Trigger: GGGGCACGGCGGGAGTAAGAGTCTGCGGGACCGGCAGCTGTACTTCATCTCCCAGCGGGCCGAGCGCTGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442092.5
CDS CAA 90 bp TCCCGCTTCCAGGTTCTACCGCCCCGACGACCGGGCTCGGAGCTCTaGTGCCCTCCGGTCCAGCGGAGCCTCCCTTGTGTCTGTCCAAGT +
Preference number: 6 (lower is better)
Translates to: SRFQVLPPRRPGSEL*CPPVQRSLPCVCPS
Trigger: ACTTGGACAGACACAAGGGAGGCTCCGCTGGACCGGAGGGCACAAGAGCTCCGAGCCCGGTCGTCGGGGCGGTAGAACCTGGAAGCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433811.1
ENST00000491874.5
CDS GCA 72 bp CTGCAAGCTCCGCCTCCGGAGTTCACGCCATTCTCCTaGCTCAGCCTCCCGAGTAGCTGCGACTACAGGCGC +
Preference number: 6 (lower is better)
Translates to: LQAPPPEFTPFS*LSLPSSCDYRR
Trigger: GCGCCTGTAGTCGCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACTCCGGAGGCGGAGCTTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483350.1
CDS GCA 72 bp CCCAGGCTGAAGTGCAGTGGCGCGATCTCGGCTCACTaGAAGCTCCGCCTCCGGAGTTCACGCCATTCTCCT +
Preference number: 6 (lower is better)
Translates to: PRLKCSGAISAH*KLRLRSSRHSP
Trigger: AGGAGAATGGCGTGAACTCCGGAGGCGGAGCTTGCAGTGAGCCGAGATCGCGCCACTGCACTTCAGCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483350.1
CDS CAA 72 bp GGAGCTCTTGTGCCCTCCGGTCCAGCGGAGCCTCCCTaGTGTCTGTCCAAGTCTGAGGACGAGGCTACGTGC +
Preference number: 6 (lower is better)
Translates to: GALVPSGPAEPP*CLSKSEDEATC
Trigger: GCACGTAGCCTCGTCCTCAGACTTGGACAGACACAAGGGAGGCTCCGCTGGACCGGAGGGCACAAGAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433811.1
ENST00000491874.5
CDS TCA 72 bp CGGTCCAGCGGAGCCTCCCTTGTGTCTGTCCAAGTCTaGGGACGAGGCTACGTGCTAAGCACAAGAGCTCCC +
Preference number: 6 (lower is better)
Translates to: RSSGASLVSVQV*GRGYVLSTRAP
Trigger: GGGAGCTCTTGTGCTTAGCACGTAGCCTCGTCCTCAGACTTGGACAGACACAAGGGAGGCTCCGCTGGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000433811.1
ENST00000491874.5
CDS TCA 72 bp GTAAGCCACCAGGCCCGGCCCCCAGTCAAACCTTCTTaGAGGTTCTTTAGCCATCTGTCTCTAGGCCAATCC +
Preference number: 6 (lower is better)
Translates to: VSHQARPPVKPS*RFFSHLSLGQS
Trigger: GGATTGGCCTAGAGACAGATGGCTAAAGAACCTTCAAGAAGGTTTGACTGGGGGCCGGGCCTGGTGGCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000483350.1
CDS GCA 72 bp GGGCATCTCGGGCAGTTTTGCCCTCTGGAAAAGACTTaGTCTGGCCATAGCCAAACATCTGGCTTCCTGGCA +
Preference number: 6 (lower is better)
Translates to: GHLGQFCPLEKT*SGHSQTSGFLA
Trigger: TGCCAGGAAGCCAGATGTTTGGCTATGGCCAGAGCAAGTCTTTTCCAGAGGGCAAAACTGCCCGAGATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS TCA 72 bp AGGAGGCCCCGAATGCCCCTGGAAATCAAAGGGAAGTaGATCTCTGCCAGGAAAGTTGCCAGAGTGTCTCTC +
Preference number: 6 (lower is better)
Translates to: RRPRMPLEIKGK*ISARKVARVSL
Trigger: GAGAGACACTCTGGCAACTTTCCTGGCAGAGATTCACTTCCCTTTGATTTCCAGGGGCATTCGGGGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000433811.1
ENST00000443081.5
ENST00000454079.5
CDS CCA 72 bp AGACTTGCTCTGGCCATAGCCAAACATCTGGCTTCCTaGCAGCCTATGATCCACATCACGGTACTCCATGCT +
Preference number: 6 (lower is better)
Translates to: RLALAIAKHLAS*QPMIHITVLHA
Trigger: AGCATGGAGTACCGTGATGTGGATCATAGGCTGCCAGGAAGCCAGATGTTTGGCTATGGCCAGAGCAAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS GCA 72 bp TTCCTGGCAGCCTATGATCCACATCACGGTACTCCATaGTTCTGTAATCGGTGTCTTGCCGCCCAAGAAAGT +
Preference number: 6 (lower is better)
Translates to: FLAAYDPHHGTP*FCNRCLAAQES
Trigger: ACTTTCTTGGGCGGCAAGACACCGATTACAGAAGCATGGAGTACCGTGATGTGGATCATAGGCTGCCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS CAA 72 bp CACATCACGGTACTCCATGCTTCTGTAATCGGTGTCTaGCCGCCCAAGAAAGTCCAGACCGCCTTCTTCTTT +
Preference number: 6 (lower is better)
Translates to: HITVLHASVIGV*PPKKVQTAFFF
Trigger: AAAGAAGAAGGCGGTCTGGACTTTCTTGGGCGGCAAGACACCGATTACAGAAGCATGGAGTACCGTGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS CAA 90 bp CCTATGATCCACATCACGGTACTCCATGCTTCTGTAATCGGTGTCTaGCCGCCCAAGAAAGTCCAGACCGCCTTCTTCTTTAAACAGACC +
Preference number: 6 (lower is better)
Translates to: PMIHITVLHASVIGV*PPKKVQTAFFFKQT
Trigger: GGTCTGTTTAAAGAAGAAGGCGGTCTGGACTTTCTTGGGCGGCAAGACACCGATTACAGAAGCATGGAGTACCGTGATGTGGATCATAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS TCA 72 bp CTTGGCCTCTGTCACTTCTCTTGGGTTCTTGCAGAATaGACAGGAAGATCGGTGCCCACCAATGTTTGCCTT +
Preference number: 6 (lower is better)
Translates to: LGLCHFSWVLAE*TGRSVPTNVCL
Trigger: AAGGCAAACATTGGTGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGAAGTGACAGAGGCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000266022.9
ENST00000419610.5
ENST00000422955.5
ENST00000425608.5
ENST00000434592.5
ENST00000441115.5
ENST00000442092.5
ENST00000443081.5
ENST00000446471.1
ENST00000454079.5
ENST00000464013.5
ENST00000466247.1
ENST00000483350.1
CDS TCA 72 bp AGAGCTCCCTTCCTAGTGATGCCACAGAATTGGATCTaGAACAGGAAAACCGCAAGAACAGCCCGCTTACAG +
Preference number: 6 (lower is better)
Translates to: RAPFLVMPQNWI*NRKTARTARLQ
Trigger: CTGTAAGCGGGCTGTTCTTGCGGTTTTCCTGTTTCAGATCCAATTCTGTGGCATCACTAGGAAGGGAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000433811.1
ENST00000491874.5
CDS GCA 72 bp CCGAATGCCCCTGGAAATCAAAGGGAAGTGAATCTCTaGCAGGAAAGTTGCCAGAGTGTCTCTCTTGAGCAT +
Preference number: 6 (lower is better)
Translates to: PNAPGNQREVNL*QESCQSVSLEH
Trigger: ATGCTCAAGAGAGACACTCTGGCAACTTTCCTGGCAGAGATTCACTTCCCTTTGATTTCCAGGGGCATTCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000433811.1
ENST00000443081.5
ENST00000454079.5
CDS GCA 72 bp GAATGCTCCTCTACATTTGCAAAAGGAGGCCCCGAATaGCCCTGGAAATCAAAGGGAAGTGAATCTCTGCCA +
Preference number: 6 (lower is better)
Translates to: ECSSTFAKGGPE*PWKSKGSESLP
Trigger: TGGCAGAGATTCACTTCCCTTTGATTTCCAGGGGCATTCGGGGCCTCCTTTTGCAAATGTAGAGGAGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000433811.1
ENST00000443081.5
ENST00000454079.5
CDS GCA 72 bp TCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCGGTaGCCACCAATGTTTGCCTTACACGAAAAGGTCCAG +
Preference number: 6 (lower is better)
Translates to: SLGFLQNEQEDR*PPMFALHEKVQ
Trigger: CTGGACCTTTTCGTGTAAGGCAAACATTGGTGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419610.5
CDS CAA 90 bp CAGTACCAAAAATCCAGGCTTGATACATACTCCAGGGTAACTTCTTaGTCCTGGATCATTAGAGTTCCCTGGTTGGCCTCCATGCATCCG +
Preference number: 6 (lower is better)
Translates to: QYQKSRLDTYSRVTS*SWIIRVPWLASMHP
Trigger: CGGATGCATGGAGGCCAACCAGGGAACTCTAATGATCCAGGACAAAGAAGTTACCCTGGAGTATGTATCAAGCCTGGATTTTTGGTACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000441115.5
ENST00000443081.5
ENST00000454079.5
ENST00000464013.5
ENST00000483350.1
CDS GCA 72 bp AGCGTGAGCATCCCTGTCTCTGTAGTTCATATGAGGTaGCTCCCTACCTCTATAATCCATAGAAGTACCATC +
Preference number: 6 (lower is better)
Translates to: SVSIPVSVVHMR*LPTSIIHRSTI
Trigger: GATGGTACTTCTATGGATTATAGAGGTAGGGAGGCACCTCATATGAACTACAGAGACAGGGATGCTCACGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS GCA 72 bp CCGCCTTCTTCTTTAAACAGACCAGCATCTGAACTCTaGTCTTCACGTCCAGAAAGCTGTGACTTATCTTGG +
Preference number: 6 (lower is better)
Translates to: PPSSLNRPASEL*SSRPESCDLSW
Trigger: CCAAGATAAGTCACAGCTTTCTGGACGTGAAGAGCAGAGTTCAGATGCTGGTCTGTTTAAAGAAGAAGGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS GCA 72 bp TCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCGGTaGCCACCAATGTTTGCCTTACATCGTTTGCAGTAC +
Preference number: 6 (lower is better)
Translates to: SLGFLQNEQEDR*PPMFALHRLQY
Trigger: GTACTGCAAACGATGTAAGGCAAACATTGGTGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000425608.5
ENST00000434592.5
ENST00000441115.5
ENST00000442092.5
ENST00000443081.5
ENST00000446471.1
ENST00000454079.5
ENST00000464013.5
ENST00000483350.1
CDS CCA 72 bp ACTGTCTCCTCCATATTCACCCAAGAGGCCGATCAGTaGGTTTACCACTTTAGGCTGCATTCAATCAGAATC +
Preference number: 6 (lower is better)
Translates to: TVSSIFTQEADQ*VYHFRLHSIRI
Trigger: GATTCTGATTGAATGCAGCCTAAAGTGGTAAACCCACTGATCGGCCTCTTGGGTGAATATGGAGGAGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441115.5
CDS CAA 72 bp AAATCCAGGCTTGATACATACTCCAGGGTAACTTCTTaGTCCTGGATCATTAGAGTTCCCTGGTTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: KSRLDTYSRVTS*SWIIRVPWLAS
Trigger: GGAGGCCAACCAGGGAACTCTAATGATCCAGGACAAAGAAGTTACCCTGGAGTATGTATCAAGCCTGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000266022.9
ENST00000441115.5
ENST00000443081.5
ENST00000454079.5
ENST00000464013.5
ENST00000483350.1
CDS CAA 72 bp TTAGGCTGCATTCAATCAGAATCACTGGTGATTAGGTaGAGACTACTGCTTGAAGGCATTGGAGGGGGACTC +
Preference number: 6 (lower is better)
Translates to: LGCIQSESLVIR*RLLLEGIGGGL
Trigger: GAGTCCCCCTCCAATGCCTTCAAGCAGTAGTCTCAACCTAATCACCAGTGATTCTGATTGAATGCAGCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441115.5
CDS CAA 72 bp CAAGGCATCTGGGACTTTGGTGCAGCCCAAATGCCTTaGCCCTGGATAAAGATTCCTATAGGAAATATGCCT +
Preference number: 6 (lower is better)
Translates to: QGIWDFGAAQMP*PWIKIPIGNMP
Trigger: AGGCATATTTCCTATAGGAATCTTTATCCAGGGCAAAGGCATTTGGGCTGCACCAAAGTCCCAGATGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466247.1
CDS CAA 90 bp TTTACCACTTTAGGCTGCATTCAATCAGAATCACTGGTGATTAGGTaGAGACTACTGCTTGAAGGCATTGGAGGGGGACTCTCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: FTTLGCIQSESLVIR*RLLLEGIGGGLSSF
Trigger: GAAGGAAGAGAGTCCCCCTCCAATGCCTTCAAGCAGTAGTCTCAACCTAATCACCAGTGATTCTGATTGAATGCAGCCTAAAGTGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441115.5
CDS TCA 72 bp TCCATACAAGATCCCATCTCTCTGCCCCTAAAATCCTaGTCAGTCCTAGATCGGTGTCTACCTCTGAAATCT +
Preference number: 6 (lower is better)
Translates to: SIQDPISLPLKS*SVLDRCLPLKS
Trigger: AGATTTCAGAGGTAGACACCGATCTAGGACTGATCAGGATTTTAGGGGCAGAGAGATGGGATCTTGTATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS GCA 72 bp TTGGTCTTGAACTGGACTTTGGCTGTTCTGAAAGTCTaGTGGAGACTCATGTTCAAAGGCTACACCTTGTGT +
Preference number: 6 (lower is better)
Translates to: LVLNWTLAVLKV*WRLMFKGYTLC
Trigger: ACACAAGGTGTAGCCTTTGAACATGAGTCTCCAGCAGACTTTCAGAACAGCCAAAGTCCAGTTCAAGACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS GCA 72 bp GGATCATTAGAGTTCCCTGTGTTATACTCCTTCAACTaGAAGTTCTTTACAGGCATGCCATCAGGAGTCCGA +
Preference number: 6 (lower is better)
Translates to: GSLEFPVLYSFN*KFFTGMPSGVR
Trigger: TCGGACTCCTGATGGCATGCCTGTAAAGAACTTGCAGTTGAAGGAGTATAACACAGGGAACTCTAATGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422955.5
ENST00000425608.5
ENST00000434592.5
CDS GCA 72 bp TCTCTTGGGTTCTTGCAGAATGAACAGGAAGATCGGTaGCCACCAATGTTTGCCTTACACTGTAAGGAAGAA +
Preference number: 6 (lower is better)
Translates to: SLGFLQNEQEDR*PPMFALHCKEE
Trigger: TTCTTCCTTACAGTGTAAGGCAAACATTGGTGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466247.1
CDS GCA 72 bp ATCCAGGGTTCAGAAAATGAACCAGGTGACCATGTCTaGATGTCTACTGAACTCCTTCACTTAAATCCGGCT +
Preference number: 6 (lower is better)
Translates to: IQGSENEPGDHV*MSTELLHLNPA
Trigger: AGCCGGATTTAAGTGAAGGAGTTCAGTAGACATGCAGACATGGTCACCTGGTTCATTTTCTGAACCCTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488807.2
CDS CCA 72 bp GTCTTGAACTGGACTTTGGCTGTTCTGAAAGTCTGCTaGAGACTCATGTTCAAAGGCTACACCTTGTGTTTC +
Preference number: 6 (lower is better)
Translates to: VLNWTLAVLKVC*RLMFKGYTLCF
Trigger: GAAACACAAGGTGTAGCCTTTGAACATGAGTCTCCAGCAGACTTTCAGAACAGCCAAAGTCCAGTTCAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS CCA 72 bp TTTGAGAGCTACCTTATAACAAGGCATCTGGGACTTTaGTGCAGCCCAAATGCCTTTGCCCTGGATAAAGAT +
Preference number: 6 (lower is better)
Translates to: FESYLITRHLGL*CSPNAFALDKD
Trigger: ATCTTTATCCAGGGCAAAGGCATTTGGGCTGCACCAAAGTCCCAGATGCCTTGTTATAAGGTAGCTCTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466247.1
CDS CAA 90 bp CAGTACCAAAAATCCAGGCTTGATACATACTCCAGGGTAACTTCTTaGTCCTGGATCATTAGAGTTCCCGAGAATGCGACTCTGGAACTA +
Preference number: 6 (lower is better)
Translates to: QYQKSRLDTYSRVTS*SWIIRVPENATLEL
Trigger: TAGTTCCAGAGTCGCATTCTCGGGAACTCTAATGATCCAGGACAAAGAAGTTACCCTGGAGTATGTATCAAGCCTGGATTTTTGGTACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446471.1
CDS CAA 72 bp AAATCCAGGCTTGATACATACTCCAGGGTAACTTCTTaGTCCTGGATCATTAGAGTTCCCGAAAAGGTCCAG +
Preference number: 6 (lower is better)
Translates to: KSRLDTYSRVTS*SWIIRVPEKVQ
Trigger: CTGGACCTTTTCGGGAACTCTAATGATCCAGGACAAAGAAGTTACCCTGGAGTATGTATCAAGCCTGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442092.5
CDS CAA 72 bp AAATCCAGGCTTGATACATACTCCAGGGTAACTTCTTaGTCCTGGATCATTAGAGTTCCCGAGAATGCGACT +
Preference number: 6 (lower is better)
Translates to: KSRLDTYSRVTS*SWIIRVPENAT
Trigger: AGTCGCATTCTCGGGAACTCTAATGATCCAGGACAAAGAAGTTACCCTGGAGTATGTATCAAGCCTGGATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446471.1
CDS TCA 72 bp TGCCTTACATCGTTTGCAGTACCAAAAATCCAGGCTTaGTACATACTCCAGGGTAACTTCTTTGTCCTGGAT +
Preference number: 6 (lower is better)
Translates to: CLTSFAVPKIQA*YILQGNFFVLD
Trigger: ATCCAGGACAAAGAAGTTACCCTGGAGTATGTATCAAGCCTGGATTTTTGGTACTGCAAACGATGTAAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000266022.9
ENST00000422955.5
ENST00000425608.5
ENST00000434592.5
ENST00000441115.5
ENST00000442092.5
ENST00000443081.5
ENST00000446471.1
ENST00000454079.5
ENST00000464013.5
ENST00000483350.1
CDS CCA 72 bp TGCCAAAAGCAGGCCTTTCTATCGTATGGTCATGTGTaGATTCTTCTCTCCTGTTCACATTCATACCAGAAT +
Preference number: 6 (lower is better)
Translates to: CQKQAFLSYGHV*ILLSCSHSYQN
Trigger: ATTCTGGTATGAATGTGAACAGGAGAGAAGAATCCACACATGACCATACGATAGAAAGGCCTGCTTTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS CAA 72 bp TGCAGAATGAACAGGAAGATCGGTGCCCACCAATGTTaGCCTTACACTGTAAGGAAGAAGGAAATCAATTTG +
Preference number: 6 (lower is better)
Translates to: CRMNRKIGAHQC*PYTVRKKEINL
Trigger: CAAATTGATTTCCTTCTTCCTTACAGTGTAAGGCAAACATTGGTGGGCACCGATCTTCCTGTTCATTCTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466247.1
CDS CAA 90 bp CAGTACCAAAAATCCAGGCTTGATACATACTCCAGGGTAACTTCTTaGTCCTGGATCATTAGAGTTCCCTGTGTTATACTCCTTCAACTG +
Preference number: 6 (lower is better)
Translates to: QYQKSRLDTYSRVTS*SWIIRVPCVILLQL
Trigger: CAGTTGAAGGAGTATAACACAGGGAACTCTAATGATCCAGGACAAAGAAGTTACCCTGGAGTATGTATCAAGCCTGGATTTTTGGTACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000422955.5
ENST00000425608.5
ENST00000434592.5
CDS CAA 90 bp TTGGGTTCTTGCAGAATGAACAGGAAGATCGGTGCCCACCAATGTTaGCCTTACACTGTAAGGAAGAAGGAAATCAATTTGACTGAAAAC +
Preference number: 6 (lower is better)
Translates to: LGSCRMNRKIGAHQC*PYTVRKKEINLTEN
Trigger: GTTTTCAGTCAAATTGATTTCCTTCTTCCTTACAGTGTAAGGCAAACATTGGTGGGCACCGATCTTCCTGTTCATTCTGCAAGAACCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466247.1
CDS CCA 72 bp CAGGGCTCTGAGTTATACAAGCCATTTCTTTGCAATTaGACCTCAGTTTCTTGCTTGAATCCATACATCTGT +
Preference number: 6 (lower is better)
Translates to: QGSELYKPFLCN*TSVSCLNPYIC
Trigger: ACAGATGTATGGATTCAAGCAAGAAACTGAGGTCCAATTGCAAAGAAATGGCTTGTATAACTCAGAGCCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446471.1
CDS CAA 72 bp AAATCCAGGCTTGATACATACTCCAGGGTAACTTCTTaGTCCTGGATCATTAGAGTTCCCTGTGTTATACTC +
Preference number: 6 (lower is better)
Translates to: KSRLDTYSRVTS*SWIIRVPCVIL
Trigger: GAGTATAACACAGGGAACTCTAATGATCCAGGACAAAGAAGTTACCCTGGAGTATGTATCAAGCCTGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000422955.5
ENST00000425608.5
ENST00000434592.5
CDS CAA 90 bp GTAGTACCTGAACCTCGGCCTCTAAAGTCTACTTGTGTTCCGTCTTaGTCTCTAAAGTCCAAATCAGATACATCTCTATTCCTAAAATCA +
Preference number: 6 (lower is better)
Translates to: VVPEPRPLKSTCVPS*SLKSKSDTSLFLKS
Trigger: TGATTTTAGGAATAGAGATGTATCTGATTTGGACTTTAGAGACAAAGACGGAACACAAGTAGACTTTAGAGGCCGAGGTTCAGGTACTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS GCA 72 bp TGCTATTTTAAGACGAAGTGGCGGAGTAAACTTTTATaGTCCCATTTCAGAACACGAGGAAAGTCAACACAA +
Preference number: 6 (lower is better)
Translates to: CYFKTKWRSKLL*SHFRTRGKSTQ
Trigger: TTGTGTTGACTTTCCTCGTGTTCTGAAATGGGAGCATAAAAGTTTACTCCGCCACTTCGTCTTAAAATAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000443081.5
ENST00000454079.5
ENST00000488807.2
ENST00000491874.5
CDS CCA 72 bp ATCTTGTGTAGAGGGCTGAATGTAATCCAAAATATTTaGATCCACAGGGGGCATCTCCCTATCTTTAAATTC +
Preference number: 6 (lower is better)
Translates to: ILCRGLNVIQNI*IHRGHLPIFKF
Trigger: GAATTTAAAGATAGGGAGATGCCCCCTGTGGATCCAAATATTTTGGATTACATTCAGCCCTCTACACAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000266022.9
ENST00000425608.5
ENST00000443081.5
ENST00000454079.5
CDS GCA 72 bp TGTCGATATCTTCTTTATCAACAAGTTTACGATCACTaGAAAAGAAGCAGACACCATCACTTCCTGTCAGTT +
Preference number: 6 (lower is better)
Translates to: CRYLLYQQVYDH*KRSRHHHFLSV
Trigger: AACTGACAGGAAGTGATGGTGTCTGCTTCTTTTGCAGTGATCGTAAACTTGTTGATAAAGAAGATATCGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421682.1
CDS CAA 72 bp AAGCCATTTCTTTGCAATTGGACCTCAGTTTCTTGCTaGAATCCATACATCTGTCAAATAATGCTTTACCTC +
Preference number: 6 (lower is better)
Translates to: KPFLCNWTSVSC*NPYICQIMLYL
Trigger: GAGGTAAAGCATTATTTGACAGATGTATGGATTCAAGCAAGAAACTGAGGTCCAATTGCAAAGAAATGGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446471.1
CDS CAA 90 bp GAGTTATACAAGCCATTTCTTTGCAATTGGACCTCAGTTTCTTGCTaGAATCCATACATCTGTCAAATAATGCTTTACCTCTCTGCTTTT +
Preference number: 6 (lower is better)
Translates to: ELYKPFLCNWTSVSC*NPYICQIMLYLSAF
Trigger: AAAAGCAGAGAGGTAAAGCATTATTTGACAGATGTATGGATTCAAGCAAGAAACTGAGGTCCAATTGCAAAGAAATGGCTTGTATAACTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446471.1
CDS TCA 72 bp AACAAAGACAGTGTTATTCATATTGTCCAGAGAGTTTaGAATCTACACACCAGCATATTCTTCTCTAATCAC +
Preference number: 6 (lower is better)
Translates to: NKDSVIHIVQRV*NLHTSIFFSNH
Trigger: GTGATTAGAGAAGAATATGCTGGTGTGTAGATTTCAAACTCTCTGGACAATATGAATAACACTGTCTTTGTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000443081.5
ENST00000454079.5