RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBM5 (Homo sapiens)

Ensembl gene IDs: ENSG00000003756

Ensembl transcript IDs: ENST00000347869.8, ENST00000395174.6, ENST00000404526.6, ENST00000433556.6, ENST00000438369.5, ENST00000441812.6, ENST00000461242.1, ENST00000462025.1, ENST00000464087.6, ENST00000464988.1, ENST00000469838.5, ENST00000471995.5, ENST00000474470.1, ENST00000474818.5, ENST00000475128.5, ENST00000475590.5, ENST00000479275.1, ENST00000489437.1, ENST00000492430.1, ENST00000492472.1, ENST00000493993.1, ENST00000494360.5, ENST00000496179.5

Found 352 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCATAGCCATCTTGACCTGGTTGCAGATAACTGTAGTCAACACTaGCTCCTTCACCACTTTGAGACTGGGTGGATGACCACTGAGCAG +
Preference number: 1 (lower is better)
Translates to: GHSHLDLVADNCSQH*LLHHFETGWMTTEQ
Trigger: CTGCTCAGTGGTCATCCACCCAGTCTCAAAGTGGTGAAGGAGGCAGTGTTGACTACAGTTATCTGCAACCAGGTCAAGATGGCTATGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395174.6
3UTR CCA 90 bp AGGCATGCCCTTAAAGAGACAGGCGGTAACAGCGAATTCGGGAGATaGACCACTTCTTGTGCTCCTTGTCATCTCTCTCTCTCTCTCTCT +
Preference number: 1 (lower is better)
Translates to: RHALKETGGNSEFGR*TTSCAPCHLSLSLS
Trigger: AGAGAGAGAGAGAGAGAGATGACAAGGAGCACAAGAAGTGGTCCATCTCCCGAATTCGCTGTTACCGCCTGTCTCTTTAAGGGCATGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
3UTR CCA 90 bp AAGGCCATTCACCAGGCAACCCACATAAGGGGAACTTCTTTAAGGTaGGAGGGAGAACCCTGCAGAATGAAGTGGTTCACCCTAAGATCT +
Preference number: 1 (lower is better)
Translates to: KAIHQATHIRGTSLR*EGEPCRMKWFTLRS
Trigger: AGATCTTAGGGTGAACCACTTCATTCTGCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGTTGCCTGGTGAATGGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
3UTR GCA 90 bp GCATCCATTGCAGAGGACAGCTGCACAAATGCGAAGCCTCTGTTCTaGTGGGTCTGTTTGTCTTTTATGAGGCGGATGTTATTGACAGCT +
Preference number: 1 (lower is better)
Translates to: ASIAEDSCTNAKPLF*WVCLSFMRRMLLTA
Trigger: AGCTGTCAATAACATCCGCCTCATAAAAGACAAACAGACCCAGCAGAACAGAGGCTTCGCATTTGTGCAGCTGTCCTCTGCAATGGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
3UTR GCA 90 bp GCAACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTaGAGAATGAAGTGGTTCACCCTAAGATCTATTAACAGCACAAGG +
Preference number: 1 (lower is better)
Translates to: ATHIRGTSLRWEGEP*RMKWFTLRSINSTR
Trigger: CCTTGTGCTGTTAATAGATCTTAGGGTGAACCACTTCATTCTGCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
3UTR CCA 90 bp AGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTGCAGAATGAAGTaGTTCACCCTAAGATCTATTAACAGCACAAGGCATGCCCTTAAA +
Preference number: 1 (lower is better)
Translates to: RGTSLRWEGEPCRMK*FTLRSINSTRHALK
Trigger: TTTAAGGGCATGCCTTGTGCTGTTAATAGATCTTAGGGTGAACCACTTCATTCTGCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
3UTR CCA 90 bp TCCATTGCAGAGGACAGCTGCACAAATGCGAAGCCTCTGTTCTGCTaGGTCTGTTTGTCTTTTATGAGGCGGATGTTATTGACAGCTAAA +
Preference number: 1 (lower is better)
Translates to: SIAEDSCTNAKPLFC*VCLSFMRRMLLTAK
Trigger: TTTAGCTGTCAATAACATCCGCCTCATAAAAGACAAACAGACCCAGCAGAACAGAGGCTTCGCATTTGTGCAGCTGTCCTCTGCAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
3UTR TCA 90 bp ACATTCCTTAGCCATGGCAAACCTTTCATTCTGAATTCATGTGCTTaGAGACTGGGGGAATCAGGATGTTCTTTAGGGACTGAGGTGGGA +
Preference number: 1 (lower is better)
Translates to: TFLSHGKPFILNSCA*RLGESGCSLGTEVG
Trigger: TCCCACCTCAGTCCCTAAAGAACATCCTGATTCCCCCAGTCTTCAAGCACATGAATTCAGAATGAAAGGTTTGCCATGGCTAAGGAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR TCA 90 bp TCAACACTGCGTGACAAAGCCAATTGGGAAGCAGCTTTACAAATGTaGCTTGACTTGGGGATCTTCTTGATACTTTGCCATGGCAAGGAA +
Preference number: 1 (lower is better)
Translates to: STLRDKANWEAALQM*LDLGIFLILCHGKE
Trigger: TTCCTTGCCATGGCAAAGTATCAAGAAGATCCCCAAGTCAAGTCACATTTGTAAAGCTGCTTCCCAATTGGCTTTGTCACGCAGTGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR CCA 90 bp AACATAGGCTACACATGTAAACACGCTACATTACACTATGTACACTaGAGTATAAACAATCCACTGTCCTCTCCGGTCTGTTCACAAGCC +
Preference number: 1 (lower is better)
Translates to: NIGYTCKHATLHYVH*SINNPLSSPVCSQA
Trigger: GGCTTGTGAACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTGTACATAGTGTAATGTAGCGTGTTTACATGTGTAGCCTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
3UTR TCA 90 bp ACAAATATACACAAGGCTTTTGCCAAGAAAAGACATCACAACAAATaGCAGAGGTGGCTTTGGTGTCACATACCACCTACAGCATCTCAA +
Preference number: 1 (lower is better)
Translates to: TNIHKAFAKKRHHNK*QRWLWCHIPPTASQ
Trigger: TTGAGATGCTGTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTTTCTTGGCAAAAGCCTTGTGTATATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347869.8
3UTR TCA 90 bp AAAATGTTATTTAAGTGCCAAGCACTGAACATTATCTTGACAAACTaGAGAACACTTCAGTTAACACTACCTCGAAGAACCATCAATGAC +
Preference number: 1 (lower is better)
Translates to: KMLFKCQALNIILTN*RTLQLTLPRRTIND
Trigger: GTCATTGATGGTTCTTCGAGGTAGTGTTAACTGAAGTGTTCTTCAGTTTGTCAAGATAATGTTCAGTGCTTGGCACTTAAATAACATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR TCA 90 bp TGCTGTCATGATGGAATCCACCACAGTGTGCGGAGCTATGTTCCGAAGAATGATCTCACATCCGCAGGCTaGGGGCCTTCGAAGGACTCC +
Preference number: 2 (lower is better)
Translates to: CCHDGIHHSVRSYVPKNDLTSAG*GPSKDS
Trigger: GGAGTCCTTCGAAGGCCCTCAGCCTGCGGATGTGAG...ATCATTCTTCGGAACATAGCTCCGCACACTGTGGTGGATTCCATCATGACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
3UTR-3UTR TCA 90 bp CTCTCTGTGATGGTGATGGGAAGGCCGCGCAGCATGATGGTCTTGCTCTCCCTCACCATAGTCACCATCTaGATGGTAGCCATCTTCGGA +
Preference number: 2 (lower is better)
Translates to: LSVMVMGRPRSMMVLLSLTIVTI*MVAIFG
Trigger: TCCGAAGATGGCTACCATTCAGATGGTGACTATGGT...GAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTCCCATCACCATCACAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438369.5
3UTR-3UTR CCA 90 bp AACAATCCACTGTCCTCTCCGGTCTGTTCACAAGCCCTCTGGCGGGAAGGAAGGCCCTGCAGAATGAAGTaGTTCACCCTAAGATCTATT +
Preference number: 2 (lower is better)
Translates to: NNPLSSPVCSQALWREGRPCRMK*FTLRSI
Trigger: AATAGATCTTAGGGTGAACCACTTCATTCTGCAGGG...CCTTCCTTCCCGCCAGAGGGCTTGTGAACAGACCGGAGAGGACAGTGGATTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
3UTR-3UTR TCA 90 bp AGACTGCATGTCTGGCCAGGAGAGAAAAAGCTGAAGGGCCATCCACTCACTGTGAAGCTGGGAGATATGTaGATAGATCATCCCACTAGG +
Preference number: 2 (lower is better)
Translates to: RLHVWPGEKKLKGHPLTVKLGDM*IDHPTR
Trigger: CCTAGTGGGATGATCTATTCACATATCTCCCAGCTT...CACAGTGAGTGGATGGCCCTTCAGCTTTTTCTCTCCTGGCCAGACATGCAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR TCA 90 bp CTGCGATATCTAAAGGCAAGACTGCATGTCTGGCCAGGAGAGAAAAAGCTGAAGATGTTCTTTAGGGACTaGGGTGGGAATGGGGAAGAG +
Preference number: 2 (lower is better)
Translates to: LRYLKARLHVWPGEKKLKMFFRD*GGNGEE
Trigger: CTCTTCCCCATTCCCACCTCAGTCCCTAAAGAACAT...CTTCAGCTTTTTCTCTCCTGGCCAGACATGCAGTCTTGCCTTTAGATATCGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR TCA 90 bp CTGCGATATCTAAAGGCAAGACTGCATGTCTGGCCAGGAGAGAAAAAGCTGAAGACTCCAAACTACCAGTaGGTCCCTAATCCTACTGGC +
Preference number: 2 (lower is better)
Translates to: LRYLKARLHVWPGEKKLKTPNYQ*VPNPTG
Trigger: GCCAGTAGGATTAGGGACTCACTGGTAGTTTGGAGT...CTTCAGCTTTTTCTCTCCTGGCCAGACATGCAGTCTTGCCTTTAGATATCGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR GCA 90 bp AGACTGCATGTCTGGCCAGGAGAGAAAAAGCTGAAGGGCCATCCACTCACTGTGCATTCTGAATTCATGTaGTTGAAGACTGGGGGAATC +
Preference number: 2 (lower is better)
Translates to: RLHVWPGEKKLKGHPLTVHSEFM*LKTGGI
Trigger: GATTCCCCCAGTCTTCAAGCACATGAATTCAGAATG...CACAGTGAGTGGATGGCCCTTCAGCTTTTTCTCTCCTGGCCAGACATGCAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR TCA 90 bp CTGCGATATCTAAAGGCAAGACTGCATGTCTGGCCAGGAGAGAAAAAGCTGAAGAAGGAACAAGCCGCCTaGACTAAATGCCACTCCATT +
Preference number: 2 (lower is better)
Translates to: LRYLKARLHVWPGEKKLKKEQAA*TKCHSI
Trigger: AATGGAGTGGCATTTAGTTCAGGCGGCTTGTTCCTT...CTTCAGCTTTTTCTCTCCTGGCCAGACATGCAGTCTTGCCTTTAGATATCGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR TCA 90 bp AGACTGCATGTCTGGCCAGGAGAGAAAAAGCTGAAGGGCCATCCACTCACTGTGTCATGGATTCATGGATaGCTCAAATCACAGAATGCT +
Preference number: 2 (lower is better)
Translates to: RLHVWPGEKKLKGHPLTVSWIHG*LKSQNA
Trigger: AGCATTCTGTGATTTGAGTCATCCATGAATCCATGA...CACAGTGAGTGGATGGCCCTTCAGCTTTTTCTCTCCTGGCCAGACATGCAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR TCA 90 bp ATGCATCAGATTCCAATCCTCCAGCTTGTTGTTGATAAAACTGCTGATAATCCTTGGGTGGATGACCACTaGGCAGCAGCAATAGCCGTA +
Preference number: 2 (lower is better)
Translates to: MHQIPILQLVVDKTADNPWVDDH*AAAIAV
Trigger: TACGGCTATTGCTGCTGCTCAGTGGTCATCCACCCA...AGGATTATCAGCAGTTTTATCAACAACAAGCTGGAGGATTGGAATCTGATGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
3UTR-3UTR GCA 90 bp GCCTCTGTTCTGCTGGGTCTGTTTGTCTTTTATGAGGCGGATGTTATTGACAGCAGAGTCAAACTTGTCTaGTCCACATCGGAAGCATTT +
Preference number: 2 (lower is better)
Translates to: ASVLLGLFVFYEADVIDSRVKLV*STSEAF
Trigger: AAATGCTTCCGATGTGGAGCAGACAAGTTTGACTCT...GCTGTCAATAACATCCGCCTCATAAAAGACAAACAGACCCAGCAGAACAGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
3UTR-3UTR CCA 90 bp TGCATCAGATTCCAATCCTCCAGCTTGTTGTTGATAAAACTGCTGATAATCCTGACTGAACCGACTCTGTaGTTCCAGGAGGCACTTCCT +
Preference number: 2 (lower is better)
Translates to: CIRFQSSSLLLIKLLIILTEPTL*FQEALP
Trigger: AGGAAGTGCCTCCTGGAACCACAGAGTCGGTTCAGT...CAGGATTATCAGCAGTTTTATCAACAACAAGCTGGAGGATTGGAATCTGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
3UTR-3UTR CCA 90 bp AGACTGCATGTCTGGCCAGGAGAGAAAAAGCTGAAGGGCCATCCACTCACTGTGCTAGGATGGTATCTATaGTATGAAATGAATGAAGCT +
Preference number: 2 (lower is better)
Translates to: RLHVWPGEKKLKGHPLTVLGWYL*YEMNEA
Trigger: AGCTTCATTCATTTCATACCATAGATACCATCCTAG...CACAGTGAGTGGATGGCCCTTCAGCTTTTTCTCTCCTGGCCAGACATGCAGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR TCA 90 bp AAATGCCGCCACAGACTTTCACTATGTTCTCTTCACTGTCAAATGGAGAGTTTGTCTAGACTTGGTGAGTaGAGCAACCTGATTGGCTTC +
Preference number: 2 (lower is better)
Translates to: KCRHRLSLCSLHCQMESLSRLGE*SNLIGF
Trigger: GAAGCCAATCAGGTTGCTTCACTCACCAAGTCTAGA...CAAACTCTCCATTTGACAGTGAAGAGAACATAGTGAAAGTCTGTGGCGGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR GCA 90 bp ATGCATCAGATTCCAATCCTCCAGCTTGTTGTTGATAAAACTGCTGATAATCCTGGACAGCTGCACAAATaGGAAGCCTCTGTTCTGCTG +
Preference number: 2 (lower is better)
Translates to: MHQIPILQLVVDKTADNPGQLHK*EASVLL
Trigger: CAGCAGAACAGAGGCTTCGCATTTGTGCAGCTGTCC...AGGATTATCAGCAGTTTTATCAACAACAAGCTGGAGGATTGGAATCTGATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
3UTR-3UTR CCA 90 bp ATGGACCACAACATAGGCTACACATGTAAACACGCTACATTACACTATGTACACAGCGAATTCGGGAGATaGACCACTTCTTGTGCTCCT +
Preference number: 2 (lower is better)
Translates to: MDHNIGYTCKHATLHYVHSEFGR*TTSCAP
Trigger: AGGAGCACAAGAAGTGGTCCATCTCCCGAATTCGCT...GTGTACATAGTGTAATGTAGCGTGTTTACATGTGTAGCCTATGTTGTGGTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
3UTR-3UTR CCA 90 bp CCCATTTCTCAAGGTATTTCTTTTGTAAAGGAGCCAGATTTGGCAACTAGACTGGGAACTTCTTTAAGGTaGGAGGGAGAACCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: PISQGISFVKEPDLATRLGTSLR*EGEPCR
Trigger: TCTGCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCC...CAGTCTAGTTGCCAAATCTGGCTCCTTTACAAAAGAAATACCTTGAGAAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
3UTR-3UTR CCA 90 bp GGGATACTTGTGTTAGTCAGTTCCTTTATAACAGGTGAATCTCTCTCCCACTGCCATGTGCTTGAAGACTaGGGGAATCAGGATGTTCTT +
Preference number: 2 (lower is better)
Translates to: GILVLVSSFITGESLSHCHVLED*GNQDVL
Trigger: AAGAACATCCTGATTCCCCCAGTCTTCAAGCACATG...GCAGTGGGAGAGAGATTCACCTGTTATAAAGGAACTGACTAACACAAGTATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR GCA 90 bp AGAAAGCAGACTCACATGAACCTTGTATATGTTCTGGATTTACTAGGATGGTATACTAGATTAGACAGCTaGAGGACACCACTCCCAGGC +
Preference number: 2 (lower is better)
Translates to: RKQTHMNLVYVLDLLGWYTRLDS*RTPLPG
Trigger: GCCTGGGAGTGGTGTCCTGCAGCTGTCTAATCTAGT...ATACCATCCTAGTAAATCCAGAACATATACAAGGTTCATGTGAGTCTGCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR CCA 90 bp GTGAATACTGAGCATATTGGGCATAGCCATCTTGACCTGGTTGCAGATAACTGTAAGCCTCTGTTCTGCTaGGTCTGTTTGTCTTTTATG +
Preference number: 2 (lower is better)
Translates to: VNTEHIGHSHLDLVADNCKPLFC*VCLSFM
Trigger: CATAAAAGACAAACAGACCCAGCAGAACAGAGGCTT...ACAGTTATCTGCAACCAGGTCAAGATGGCTATGCCCAATATGCTCAGTATTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
3UTR-3UTR GCA 90 bp CCCATTTCTCAAGGTATTTCTTTTGTAAAGGAGCCAGATTTGGCAACTAGACTGATGGACCACTTCTTGTaGTCCTTGTCATCTCTCTCT +
Preference number: 2 (lower is better)
Translates to: PISQGISFVKEPDLATRLMDHFL*SLSSLS
Trigger: AGAGAGAGATGACAAGGAGCACAAGAAGTGGTCCAT...CAGTCTAGTTGCCAAATCTGGCTCCTTTACAAAAGAAATACCTTGAGAAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
3UTR-3UTR GCA 90 bp ATGTCAAGAAAGCAGACTCACATGAACCTTGTATATGTTCTGGATTTACTAGGACCACTGCTTCAACACTaGGTGACAAAGCCAATTGGG +
Preference number: 2 (lower is better)
Translates to: MSRKQTHMNLVYVLDLLGPLLQH*VTKPIG
Trigger: CCCAATTGGCTTTGTCACGCAGTGTTGAAGCAGTGG...TCCTAGTAAATCCAGAACATATACAAGGTTCATGTGAGTCTGCTTTCTTGACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR TCA 90 bp ATGTCAAGAAAGCAGACTCACATGAACCTTGTATATGTTCTGGATTTACTAGGACTGAATTCATGTGCTTaGAGACTGGGGGAATCAGGA +
Preference number: 2 (lower is better)
Translates to: MSRKQTHMNLVYVLDLLGLNSCA*RLGESG
Trigger: TCCTGATTCCCCCAGTCTTCAAGCACATGAATTCAG...TCCTAGTAAATCCAGAACATATACAAGGTTCATGTGAGTCTGCTTTCTTGACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR CCA 90 bp CAGGACACCCATTTCTCAAGGTATTTCTTTTGTAAAGGAGCCAGATTTGGCAACTTACACTATGTACACTaGAGTATAAACAATCCACTG +
Preference number: 2 (lower is better)
Translates to: QDTHFSRYFFCKGARFGNLHYVH*SINNPL
Trigger: CAGTGGATTGTTTATACTCCAGTGTACATAGTGTAA...GTTGCCAAATCTGGCTCCTTTACAAAAGAAATACCTTGAGAAATGGGTGTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
3UTR-3UTR TCA 90 bp ATGTCAAGAAAGCAGACTCACATGAACCTTGTATATGTTCTGGATTTACTAGGAGCAAACCTTTCATTCTaGATTCATGTGCTTGAAGAC +
Preference number: 2 (lower is better)
Translates to: MSRKQTHMNLVYVLDLLGANLSF*IHVLED
Trigger: GTCTTCAAGCACATGAATTCAGAATGAAAGGTTTGC...TCCTAGTAAATCCAGAACATATACAAGGTTCATGTGAGTCTGCTTTCTTGACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR TCA 90 bp TTACTTATAAAAATGCCGCCACAGACTTTCACTATGTTCTCTTCACTGTCAAATTTCCTTTATAACAGGTaGATCTCTCTCCCACTGCTT +
Preference number: 2 (lower is better)
Translates to: LLIKMPPQTFTMFSSLSNFLYNR*ISLPLL
Trigger: AAGCAGTGGGAGAGAGATTCACCTGTTATAAAGGAA...ATTTGACAGTGAAGAGAACATAGTGAAAGTCTGTGGCGGCATTTTTATAAGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR TCA 90 bp GTTAGTCATTCTGACATATCCACTGCATCAAACAATGCTATCATGTCAAGAAAGTCGAAGAACCATCAATaGCTTGCTTTGAACAGACTA +
Preference number: 2 (lower is better)
Translates to: VSHSDISTASNNAIMSRKSKNHQ*LALNRL
Trigger: TAGTCTGTTCAAAGCAAGTCATTGATGGTTCTTCGA...CTTTCTTGACATGATAGCATTGTTTGATGCAGTGGATATGTCAGAATGACTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR TCA 90 bp AGAAAGCAGACTCACATGAACCTTGTATATGTTCTGGATTTACTAGGATGGTATTTTACAAATGTGACTTaGCTTGGGGATCTTCTTGAT +
Preference number: 2 (lower is better)
Translates to: RKQTHMNLVYVLDLLGWYFTNVT*LGDLLD
Trigger: ATCAAGAAGATCCCCAAGTCAAGTCACATTTGTAAA...ATACCATCCTAGTAAATCCAGAACATATACAAGGTTCATGTGAGTCTGCTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR TCA 90 bp GTTAGTCATTCTGACATATCCACTGCATCAAACAATGCTATCATGTCAAGAAAGGTCAAATGGAGAGTTTaGTATACTAAGCTTACTCTC +
Preference number: 2 (lower is better)
Translates to: VSHSDISTASNNAIMSRKVKWRV*YTKLTL
Trigger: GAGAGTAAGCTTAGTATATCAAACTCTCCATTTGAC...CTTTCTTGACATGATAGCATTGTTTGATGCAGTGGATATGTCAGAATGACTAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR CCA 90 bp GTTAGTCATTCTGACATATCCACTGCATCAAACAATGCTATCATGTCAAGAAAGAAAAAGTCACTCCTTTaGAACAAACCACTCCTTCAA +
Preference number: 2 (lower is better)
Translates to: VSHSDISTASNNAIMSRKKKSLL*NKPLLQ
Trigger: TTGAAGGAGTGGTTTGTTCCAAAGGAGTGACTTTTT...CTTTCTTGACATGATAGCATTGTTTGATGCAGTGGATATGTCAGAATGACTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR CCA 90 bp TTACTTATAAAAATGCCGCCACAGACTTTCACTATGTTCTCTTCACTGTCAAATCCTCAGATGCTAACATaGTTTTCAAAGAGTCACATT +
Preference number: 2 (lower is better)
Translates to: LLIKMPPQTFTMFSSLSNPQMLT*FSKSHI
Trigger: AATGTGACTCTTTGAAAACCATGTTAGCATCTGAGG...ATTTGACAGTGAAGAGAACATAGTGAAAGTCTGTGGCGGCATTTTTATAAGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR CCA 90 bp GTTAGTCATTCTGACATATCCACTGCATCAAACAATGCTATCATGTCAAGAAAGCTGGATTTACTAGGATaGTATCTATGGTATGAAATG +
Preference number: 2 (lower is better)
Translates to: VSHSDISTASNNAIMSRKLDLLG*YLWYEM
Trigger: CATTTCATACCATAGATACCATCCTAGTAAATCCAG...CTTTCTTGACATGATAGCATTGTTTGATGCAGTGGATATGTCAGAATGACTAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR CAA 90 bp CATTCACCAGGCAACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCGAGATGGACCACTTCTaGTGCTCCTTGTCATCTCTC +
Preference number: 3 (lower is better)
Translates to: HSPGNPHKGNFFKVGGRTEMDHF*CSLSSL
Trigger: GAGAGATGACAAGGAGCACAAGAAGTGGTCCATCTC...GGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGTTGCCTGGTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
3UTR-3UTR CAA 90 bp AGACTGCATGTCTGGCCAGGAGAGAAAAAGCTGAAGGGCCATCCACTCACTGTGGACTTGGGGATCTTCTaGATACTTTGCCATGGCAAG +
Preference number: 3 (lower is better)
Translates to: RLHVWPGEKKLKGHPLTVDLGIF*ILCHGK
Trigger: CTTGCCATGGCAAAGTATCAAGAAGATCCCCAAGTC...CACAGTGAGTGGATGGCCCTTCAGCTTTTTCTCTCCTGGCCAGACATGCAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR TCA 72 bp AGGAGGGATGTGTGCTGGGAGACTCCAAACTACCAGTaGGTCCCTAATCCTACTGGCCTTTTATTTCTGGAG +
Preference number: 3 (lower is better)
Translates to: RRDVCWETPNYQ*VPNPTGLLFLE
Trigger: CTCCAGAAATAAAAGGCCAGTAGGATTAGGGACTCACTGGTAGTTTGGAGTCTCCCAGCACACATCCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR GCA 72 bp CATCTTGACCTGGTTGCAGATAACTGTAGTCAACACTaGCTCCTTCACCACTTTGAGACTGGGTGGATGACC +
Preference number: 3 (lower is better)
Translates to: HLDLVADNCSQH*LLHHFETGWMT
Trigger: GGTCATCCACCCAGTCTCAAAGTGGTGAAGGAGGCAGTGTTGACTACAGTTATCTGCAACCAGGTCAAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395174.6
3UTR CCA 72 bp CTTAAAGAGACAGGCGGTAACAGCGAATTCGGGAGATaGACCACTTCTTGTGCTCCTTGTCATCTCTCTCTC +
Preference number: 3 (lower is better)
Translates to: LKETGGNSEFGR*TTSCAPCHLSL
Trigger: GAGAGAGAGATGACAAGGAGCACAAGAAGTGGTCCATCTCCCGAATTCGCTGTTACCGCCTGTCTCTTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
3UTR CCA 72 bp TTGTCTCTGCGATATCTAAAGGCAAGACTGCATGTCTaGCCAGGAGAGAAAAAGCTGAAGGGCCATCCACTC +
Preference number: 3 (lower is better)
Translates to: LSLRYLKARLHV*PGEKKLKGHPL
Trigger: GAGTGGATGGCCCTTCAGCTTTTTCTCTCCTGGCCAGACATGCAGTCTTGCCTTTAGATATCGCAGAGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR CAA 90 bp CCGACTCTGTGGTTCCAGGAGGCACTTCCTGTTCAGAGTCAAACTTGTCTGCTCGATTGCTATAATGCATaGCAATGTGCTTTCCTTGAA +
Preference number: 3 (lower is better)
Translates to: PTLWFQEALPVQSQTCLLDCYNA*QCAFLE
Trigger: TTCAAGGAAAGCACATTGCAATGCATTATAGCAATC...GAGCAGACAAGTTTGACTCTGAACAGGAAGTGCCTCCTGGAACCACAGAGTCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395174.6
3UTR-3UTR CAA 90 bp CCGACTCTGTGGTTCCAGGAGGCACTTCCTGTTCAGAGTCAAACTTGTCTGCTCAGTCTTTTCCTGAAATaGTTAAGGCAGCACTTGTTA +
Preference number: 3 (lower is better)
Translates to: PTLWFQEALPVQSQTCLLSLFLK*LRQHLL
Trigger: TAACAAGTGCTGCCTTAACAATTTCAGGAAAAGACT...GAGCAGACAAGTTTGACTCTGAACAGGAAGTGCCTCCTGGAACCACAGAGTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
3UTR TCA 72 bp ACTAGCTACAGAGAAAGCGCTGACGCGGTTACCATCTaGGAGGACCAAGTCTTTTCTGGCACTTTTTGCAAA +
Preference number: 3 (lower is better)
Translates to: TSYRESADAVTI*EDQVFSGTFCK
Trigger: TTTGCAAAAAGTGCCAGAAAAGACTTGGTCCTCTCAGATGGTAACCGCGTCAGCGCTTTCTCTGTAGCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395174.6
3UTR TCA 72 bp ACAGGTGAATCTCTCTCCCACTGCTTCAACACTGCGTaGCAAAGCCAATTGGGAAGCAGCTTTACAAATGTG +
Preference number: 3 (lower is better)
Translates to: TGESLSHCFNTA*QSQLGSSFTNV
Trigger: CACATTTGTAAAGCTGCTTCCCAATTGGCTTTGTCACGCAGTGTTGAAGCAGTGGGAGAGAGATTCACCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR TCA 72 bp TTCTTGGGGGTGGGAGGATCAAGGGTGGGGGTGGTTTaGCACTATCAAACAGATTTAAGTAGGTGGTTAGAT +
Preference number: 3 (lower is better)
Translates to: FLGVGGSRVGVV*HYQTDLSRWLD
Trigger: ATCTAACCACCTACTTAAATCTGTTTGATAGTGTCAAACCACCCCCACCCTTGATCCTCCCACCCCCAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR CAA 90 bp AAAGACATCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACAGCACTTCTTGTGCTCCTaGTCATCTCTCTCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: KDITTNDRGGFGVTYHLQHFLCS*SSLSLS
Trigger: AGAGAGAGAGAGAGATGACAAGGAGCACAAGAAGTG...CTGTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
3UTR TCA 72 bp CGGGATACTTGTGTTAGTCAGTTCCTTTATAACAGGTaGATCTCTCTCCCACTGCTTCAACACTGCGTGACA +
Preference number: 3 (lower is better)
Translates to: RDTCVSQFLYNR*ISLPLLQHCVT
Trigger: TGTCACGCAGTGTTGAAGCAGTGGGAGAGAGATTCACCTGTTATAAAGGAACTGACTAACACAAGTATCCCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR CCA 72 bp TCTTTAAGGTGGGAGGGAGAACCCTGCAGAATGAAGTaGTTCACCCTAAGATCTATTAACAGCACAAGGCAT +
Preference number: 3 (lower is better)
Translates to: SLRWEGEPCRMK*FTLRSINSTRH
Trigger: ATGCCTTGTGCTGTTAATAGATCTTAGGGTGAACCACTTCATTCTGCAGGGTTCTCCCTCCCACCTTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
3UTR-3UTR CAA 90 bp ATGCATCAGATTCCAATCCTCCAGCTTGTTGTTGATAAAACTGCTGATAATCCTGCTGAGAAGCATCCATaGCAGAGGACAGCTGCACAA +
Preference number: 3 (lower is better)
Translates to: MHQIPILQLVVDKTADNPAEKHP*QRTAAQ
Trigger: TTGTGCAGCTGTCCTCTGCAATGGATGCTTCTCAGC...AGGATTATCAGCAGTTTTATCAACAACAAGCTGGAGGATTGGAATCTGATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
3UTR-3UTR CAA 90 bp GGGATACTTGTGTTAGTCAGTTCCTTTATAACAGGTGAATCTCTCTCCCACTGCGATCTTCTTGATACTTaGCCATGGCAAGGAACAAGC +
Preference number: 3 (lower is better)
Translates to: GILVLVSSFITGESLSHCDLLDT*PWQGTS
Trigger: GCTTGTTCCTTGCCATGGCAAAGTATCAAGAAGATC...GCAGTGGGAGAGAGATTCACCTGTTATAAAGGAACTGACTAACACAAGTATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR TCA 72 bp CACAAGGCTTTTGCCAAGAAAAGACATCACAACAAATaGCAGAGGTGGCTTTGGTGTCACATACCACCTACA +
Preference number: 3 (lower is better)
Translates to: HKAFAKKRHHNK*QRWLWCHIPPT
Trigger: TGTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTTTCTTGGCAAAAGCCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347869.8
3UTR TCA 72 bp GAGTCACATTCCTTAGCCATGGCAAACCTTTCATTCTaGATTCATGTGCTTGAAGACTGGGGGAATCAGGAT +
Preference number: 3 (lower is better)
Translates to: ESHSLAMANLSF*IHVLEDWGNQD
Trigger: ATCCTGATTCCCCCAGTCTTCAAGCACATGAATTCAGAATGAAAGGTTTGCCATGGCTAAGGAATGTGACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR GCA 72 bp ATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTaGAGAATGAAGTGGTTCACCCTAAGATCTATTAAC +
Preference number: 3 (lower is better)
Translates to: IRGTSLRWEGEP*RMKWFTLRSIN
Trigger: GTTAATAGATCTTAGGGTGAACCACTTCATTCTGCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
3UTR-3UTR CAA 90 bp TGCATCAGATTCCAATCCTCCAGCTTGTTGTTGATAAAACTGCTGATAATCCTGTGTTCAGAGTCAAACTaGTCTGCTCCACATCGGAAG +
Preference number: 3 (lower is better)
Translates to: CIRFQSSSLLLIKLLIILCSESN*SAPHRK
Trigger: CTTCCGATGTGGAGCAGACAAGTTTGACTCTGAACA...CAGGATTATCAGCAGTTTTATCAACAACAAGCTGGAGGATTGGAATCTGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
3UTR-3UTR CAA 90 bp TGCATCAGATTCCAATCCTCCAGCTTGTTGTTGATAAAACTGCTGATAATCCTGGCCATCTTGACCTGGTaGCAGATAACTGTAGTCAAC +
Preference number: 3 (lower is better)
Translates to: CIRFQSSSLLLIKLLIILAILTW*QITVVN
Trigger: GTTGACTACAGTTATCTGCAACCAGGTCAAGATGGC...CAGGATTATCAGCAGTTTTATCAACAACAAGCTGGAGGATTGGAATCTGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
3UTR TCA 72 bp CAAAGCCAATTGGGAAGCAGCTTTACAAATGTGACTTaGCTTGGGGATCTTCTTGATACTTTGCCATGGCAA +
Preference number: 3 (lower is better)
Translates to: QSQLGSSFTNVT*LGDLLDTLPWQ
Trigger: TTGCCATGGCAAAGTATCAAGAAGATCCCCAAGTCAAGTCACATTTGTAAAGCTGCTTCCCAATTGGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR TCA 72 bp CGTGACAAAGCCAATTGGGAAGCAGCTTTACAAATGTaGCTTGACTTGGGGATCTTCTTGATACTTTGCCAT +
Preference number: 3 (lower is better)
Translates to: RDKANWEAALQM*LDLGIFLILCH
Trigger: ATGGCAAAGTATCAAGAAGATCCCCAAGTCAAGTCACATTTGTAAAGCTGCTTCCCAATTGGCTTTGTCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR CCA 72 bp TACACATGTAAACACGCTACATTACACTATGTACACTaGAGTATAAACAATCCACTGTCCTCTCCGGTCTGT +
Preference number: 3 (lower is better)
Translates to: YTCKHATLHYVH*SINNPLSSPVC
Trigger: ACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTGTACATAGTGTAATGTAGCGTGTTTACATGTGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
3UTR-3UTR CAA 90 bp GTTAGTCATTCTGACATATCCACTGCATCAAACAATGCTATCATGTCAAGAAAGTCTGAATTCATGTGCTaGAAGACTGGGGGAATCAGG +
Preference number: 3 (lower is better)
Translates to: VSHSDISTASNNAIMSRKSEFMC*KTGGIR
Trigger: CCTGATTCCCCCAGTCTTCAAGCACATGAATTCAGA...CTTTCTTGACATGATAGCATTGTTTGATGCAGTGGATATGTCAGAATGACTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR-3UTR CAA 90 bp ATGTCAAGAAAGCAGACTCACATGAACCTTGTATATGTTCTGGATTTACTAGGACCAGCTGGTAGCATCTaGCAAGTGATAAAACTCCAC +
Preference number: 3 (lower is better)
Translates to: MSRKQTHMNLVYVLDLLGPAGSI*QVIKLH
Trigger: GTGGAGTTTTATCACTTGCAAGATGCTACCAGCTGG...TCCTAGTAAATCCAGAACATATACAAGGTTCATGTGAGTCTGCTTTCTTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR CCA 72 bp CACATGAACCTTGTATATGTTCTGGATTTACTAGGATaGTATCTATGGTATGAAATGAATGAAGCTCTACTT +
Preference number: 3 (lower is better)
Translates to: HMNLVYVLDLLG*YLWYEMNEALL
Trigger: AAGTAGAGCTTCATTCATTTCATACCATAGATACCATCCTAGTAAATCCAGAACATATACAAGGTTCATGTG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR TCA 90 bp CTCTCTGTGATGGTGATGGGAAGGCCGCGCAGCATGATGGTCTTGCTCTCCCTCGAAGGCCGCGCAGCATaGTGGTCTTGCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LSVMVMGRPRSMMVLLSLEGRAA*WSCSPS
Trigger: AGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTC...GAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTCCCATCACCATCACAGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438369.5
CDS-3UTR TCA 90 bp TCGCTCTCTGTGATGGTGATGGGAAGGCCGCGCAGCATGATGGTCTTGCTCTCCAGCCTCCTGAGTAGCTaGGGTCGCACCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: SLSVMVMGRPRSMMVLLSSLLSS*GRTTAL
Trigger: GAGTGCAGTGGTGCGACCTCAGCTACTCAGGAGGCT...GGAGAGCAAGACCATCATGCTGCGCGGCCTTCCCATCACCATCACAGAGAGCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438369.5
CDS-3UTR GCA 90 bp CAATCCACTGTCCTCTCCGGTCTGTTCACAAGCCCTCTGGCGGGAAGGAAGGCCCTCTTTCCCCTCTTTTaGAGGAGGCAGGCCCGACTG +
Preference number: 4 (lower is better)
Translates to: QSTVLSGLFTSPLAGRKALFPLF*RRQARL
Trigger: CAGTCGGGCCTGCCTCCTGCAAAAGAGGGGAAAGAG...GGCCTTCCTTCCCGCCAGAGGGCTTGTGAACAGACCGGAGAGGACAGTGGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp GTGATGGGAAGGCCGCGCAGCATGATGGTCTTGCTCTCCCTCTCGTCACTGATGTCTCTCTCAGCCTCCTaGGTAGCTGAGGTCGCACCA +
Preference number: 4 (lower is better)
Translates to: VMGRPRSMMVLLSLSSLMSLSAS*VAEVAP
Trigger: TGGTGCGACCTCAGCTACTCAGGAGGCTGAGAGAGA...CATCAGTGACGAGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTCCCATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438369.5
CDS-3UTR GCA 90 bp GGAAGGCCGCGCAGCATGATGGTCTTGCTCTCCCTCTCGTCACTGATGTCATGCCTGAGTCCCTCCGCCTaGTTCGGGATTCACGCTCAT +
Preference number: 4 (lower is better)
Translates to: GRPRSMMVLLSLSSLMSCLSPSA*FGIHAH
Trigger: ATGAGCGTGAATCCCGAAGCAGGCGGAGGGACTCAG...GCATGACATCAGTGACGAGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438369.5
CDS-3UTR CCA 90 bp AACAATCCACTGTCCTCTCCGGTCTGTTCACAAGCCCTCTGGCGGGAAGGAAGGAGGCCCGACTGCTGGTaGGAGCTAGACTCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: NNPLSSPVCSQALWREGRRPDCW*ELDSAA
Trigger: AGCTGCAGAGTCTAGCTCCCACCAGCAGTCGGGCCT...CCTTCCTTCCCGCCAGAGGGCTTGTGAACAGACCGGAGAGGACAGTGGATTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp CCAGGCAACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTGCAGGGCAGGCCCGACTGCTaGTGGGAGCTAGACTCTGCA +
Preference number: 4 (lower is better)
Translates to: PGNPHKGNFFKVGGRTLQGRPDC*WELDSA
Trigger: TGCAGAGTCTAGCTCCCACCAGCAGTCGGGCCTGCC...CTGCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGTTGCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp ACAAGGCATGCCCTTAAAGAGACAGGCGGTAACAGCGAATTCGGGAGATGGACCGGAGGCAGGCCCGACTaGTGGTGGGAGCTAGACTCT +
Preference number: 4 (lower is better)
Translates to: TRHALKETGGNSEFGRWTGGRPD*WWELDS
Trigger: AGAGTCTAGCTCCCACCAGCAGTCGGGCCTGCCTCC...GGTCCATCTCCCGAATTCGCTGTTACCGCCTGTCTCTTTAAGGGCATGCCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp CACCAGGCAACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTGCAAGGCTTCCAGCTCCTaGTCGCTCAGCCTGGATCGT +
Preference number: 4 (lower is better)
Translates to: HQATHIRGTSLRWEGEPCKASSS*SLSLDR
Trigger: ACGATCCAGGCTGAGCGAGCAGGAGCTGGAAGCCTT...GCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGTTGCCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp CCAGGCAACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTGCAGAGTAGGGGAAGCGGCTaGGGCCTGTGTACTTGTGCT +
Preference number: 4 (lower is better)
Translates to: PGNPHKGNFFKVGGRTLQSRGSG*GLCTCA
Trigger: AGCACAAGTACACAGGCCCCAGCCGCTTCCCCTACT...CTGCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGTTGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp TGTGATGGTGATGGGAAGGCCGCGCAGCATGATGGTCTTGCTCTCCCTCTCGTCGGTCATCCCTGTCTATaGTGGAACCGTATCTTCCAC +
Preference number: 4 (lower is better)
Translates to: CDGDGKAAQHDGLALPLVGHPCL*WNRIFH
Trigger: GTGGAAGATACGGTTCCATCATAGACAGGGATGACC...GACGAGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTCCCATCACCATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438369.5
CDS-3UTR TCA 90 bp CCAGGCAACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTGCAGTGGGTGGATGACCACTaGGCAGCAGCAATAGCCGTA +
Preference number: 4 (lower is better)
Translates to: PGNPHKGNFFKVGGRTLQWVDDH*AAAIAV
Trigger: TACGGCTATTGCTGCTGCTCAGTGGTCATCCACCCA...CTGCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGTTGCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp AGACAGGCGGTAACAGCGAATTCGGGAGATGGACCACTTCTTGTGCTCCTTGTCGCTAGTGCTAGGCTGTaGTTCCTCAGTCGGAGAGCC +
Preference number: 4 (lower is better)
Translates to: RQAVTANSGDGPLLVLLVASARL*FLSRRA
Trigger: GGCTCTCCGACTGAGGAAGCACAGCCTAGCACTAGC...GACAAGGAGCACAAGAAGTGGTCCATCTCCCGAATTCGCTGTTACCGCCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp CACCAGGCAACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTGCTCTGGGATGAGCTGCTaGCTTTCAGCTAAGGCTCCC +
Preference number: 4 (lower is better)
Translates to: HQATHIRGTSLRWEGEPCSGMSC*LSAKAP
Trigger: GGGAGCCTTAGCTGAAAGGCAGCAGCTCATCCCAGA...GCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGTTGCCTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp CATTCACCAGGCAACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTTCCCGCCAGCCCATaGCCTGCAGCATCTTGTTGC +
Preference number: 4 (lower is better)
Translates to: HSPGNPHKGNFFKVGGRTLPASP*PAASCC
Trigger: GCAACAAGATGCTGCAGGCCATGGGCTGGCGGGAAG...GGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGTTGCCTGGTGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp GGAAGGCCGCGCAGCATGATGGTCTTGCTCTCCCTCTCGTCACTGATGTCATGCACCATAGTCACCATCTaGATGGTAGCCATCTTCGGA +
Preference number: 4 (lower is better)
Translates to: GRPRSMMVLLSLSSLMSCTIVTI*MVAIFG
Trigger: TCCGAAGATGGCTACCATTCAGATGGTGACTATGGT...GCATGACATCAGTGACGAGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438369.5
CDS-3UTR TCA 90 bp ACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTGCAGAATGAAGGGACACTACAGCCGCTaGGGTGGTGGTCACTGCTGT +
Preference number: 4 (lower is better)
Translates to: THIRGTSLRWEGEPCRMKGHYSR*GGGHCC
Trigger: ACAGCAGTGACCACCACCTCAGCGGCTGTAGTGTCC...CTTCATTCTGCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp CCAGGCAACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTGCAGCTCACTCCATCTCAGTaGACCGGGCAAACATGGCTT +
Preference number: 4 (lower is better)
Translates to: PGNPHKGNFFKVGGRTLQLTPSQ*TGQTWL
Trigger: AAGCCATGTTTGCCCGGTTCACTGAGATGGAGTGAG...CTGCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGTTGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp CACCAGGCAACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTGCGGACAGCTGCACAAATaGGAAGCCTCTGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: HQATHIRGTSLRWEGEPCGQLHK*EASVLL
Trigger: CAGCAGAACAGAGGCTTCGCATTTGTGCAGCTGTCC...GCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGTTGCCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp CACTGGAGTATAAACAATCCACTGTCCTCTCCGGTCTGTTCACAAGCCCTCTGGGTGGGAGCTAGACTCTaGAGCTGGCACGTAGGTCTC +
Preference number: 4 (lower is better)
Translates to: HWSINNPLSSPVCSQALWVGARL*SWHVGL
Trigger: GAGACCTACGTGCCAGCTGCAGAGTCTAGCTCCCAC...CCAGAGGGCTTGTGAACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp AAAGACATCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACAGGGCGGCTACACAAAATaGCGCCTCCGCCGACGGCCG +
Preference number: 4 (lower is better)
Translates to: KDITTNDRGGFGVTYHLQGGYTK*RLRRRP
Trigger: CGGCCGTCGGCGGAGGCGCCATTTTGTGTAGCCGCC...CTGTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp CCAGGCAACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTGCAGACTGCTTCTTGCGCTTaGGCTCTGGAGGTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: PGNPHKGNFFKVGGRTLQTASCA*ALEVLE
Trigger: TTCCAGAACCTCCAGAGCCCAAGCGCAAGAAGCAGT...CTGCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGTTGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp CCAGGCAACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTGCAGGGTCATCCCTGTCTATaGTGGAACCGTATCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PGNPHKGNFFKVGGRTLQGHPCL*WNRIFH
Trigger: GTGGAAGATACGGTTCCATCATAGACAGGGATGACC...CTGCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGTTGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp CTGCGATATCTAAAGGCAAGACTGCATGTCTGGCCAGGAGAGAAAAAGCTGAAGGAAGGCCGCGCAGCATaGTGGTCTTGCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LRYLKARLHVWPGEKKLKEGRAA*WSCSPS
Trigger: AGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTC...CTTCAGCTTTTTCTCTCCTGGCCAGACATGCAGTCTTGCCTTTAGATATCGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR TCA 90 bp ACAAGGCATGCCCTTAAAGAGACAGGCGGTAACAGCGAATTCGGGAGATGGACCTTGAGACTGGGTGGATaGCCACTGAGCAGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: TRHALKETGGNSEFGRWTLRLGG*PLSSSN
Trigger: ATTGCTGCTGCTCAGTGGTCATCCACCCAGTCTCAA...GGTCCATCTCCCGAATTCGCTGTTACCGCCTGTCTCTTTAAGGGCATGCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp AGACAGGCGGTAACAGCGAATTCGGGAGATGGACCACTTCTTGTGCTCCTTGTCTTGCTTGTGAAGGTCTaGGAGTTGCTGGTGCCTGAC +
Preference number: 4 (lower is better)
Translates to: RQAVTANSGDGPLLVLLVLLVKV*ELLVPD
Trigger: GTCAGGCACCAGCAACTCTCAGACCTTCACAAGCAA...GACAAGGAGCACAAGAAGTGGTCCATCTCCCGAATTCGCTGTTACCGCCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp AAATGCCGCCACAGACTTTCACTATGTTCTCTTCACTGTCAAATGGAGAGTTTGGGCGGCTACACAAAATaGCGCCTCCGCCGACGGCCG +
Preference number: 4 (lower is better)
Translates to: KCRHRLSLCSLHCQMESLGGYTK*RLRRRP
Trigger: CGGCCGTCGGCGGAGGCGCCATTTTGTGTAGCCGCC...CAAACTCTCCATTTGACAGTGAAGAGAACATAGTGAAAGTCTGTGGCGGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR CCA 90 bp CAATCCACTGTCCTCTCCGGTCTGTTCACAAGCCCTCTGGCGGGAAGGAAGGCCATAGCCATCTTGACCTaGTTGCAGATAACTGTAGTC +
Preference number: 4 (lower is better)
Translates to: QSTVLSGLFTSPLAGRKAIAILT*LQITVV
Trigger: GACTACAGTTATCTGCAACCAGGTCAAGATGGCTAT...GGCCTTCCTTCCCGCCAGAGGGCTTGTGAACAGACCGGAGAGGACAGTGGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp CACTGGAGTATAAACAATCCACTGTCCTCTCCGGTCTGTTCACAAGCCCTCTGGCCTGCTCGCTCAGCCTaGATCGTCGATAGATGTCCA +
Preference number: 4 (lower is better)
Translates to: HWSINNPLSSPVCSQALWPARSA*IVDRCP
Trigger: TGGACATCTATCGACGATCCAGGCTGAGCGAGCAGG...CCAGAGGGCTTGTGAACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp TTCGGGAGATGGACCACTTCTTGTGCTCCTTGTCATCTCTCTCTCTCTCTCTCTGGGCTCTGGAGGTTCTaGAATGCCGTACTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: FGRWTTSCAPCHLSLSLSGLWRF*NAVLLP
Trigger: CGGGAGAAGTACGGCATTCCAGAACCTCCAGAGCCC...AGAGAGAGAGAGAGAGAGATGACAAGGAGCACAAGAAGTGGTCCATCTCCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp CACTGGAGTATAAACAATCCACTGTCCTCTCCGGTCTGTTCACAAGCCCTCTGGTGTTCACAAGCCCTCTaGCGGGAAGGAAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: HWSINNPLSSPVCSQALWCSQAL*REGRPF
Trigger: GAATGGCCTTCCTTCCCGCCAGAGGGCTTGTGAACA...CCAGAGGGCTTGTGAACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp AATATCGCTCTCTGTGATGGTGATGGGAAGGCCGCGCAGCATGATGGTCTTGCTAGATCTTTTGTAATCTaGGTCCCTCCGCCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: NIALCDGDGKAAQHDGLARSFVI*VPPPAS
Trigger: CGAAGCAGGCGGAGGGACTCAGATTACAAAAGATCT...AGCAAGACCATCATGCTGCGCGGCCTTCCCATCACCATCACAGAGAGCGATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438369.5
CDS-3UTR TCA 90 bp AGACAGGCGGTAACAGCGAATTCGGGAGATGGACCACTTCTTGTGCTCCTTGTCTCTCCCTCTCGTCACTaGTGTCATGCCTATAGTCGT +
Preference number: 4 (lower is better)
Translates to: RQAVTANSGDGPLLVLLVSPSRH*CHAYSR
Trigger: ACGACTATAGGCATGACATCAGTGACGAGAGGGAGA...GACAAGGAGCACAAGAAGTGGTCCATCTCCCGAATTCGCTGTTACCGCCTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp CTCCATCATTTCTCGAATATCGCTCTCTGTGATGGTGATGGGAAGGCCGCGCAGTCTCCCTCTCGTCACTaGTGTCATGCCTATAGTCGT +
Preference number: 4 (lower is better)
Translates to: LHHFSNIALCDGDGKAAQSPSRH*CHAYSR
Trigger: ACGACTATAGGCATGACATCAGTGACGAGAGGGAGA...CTGCGCGGCCTTCCCATCACCATCACAGAGAGCGATATTCGAGAAATGATGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438369.5
CDS-3UTR TCA 90 bp GCACTTCCTGTTCAGAGTCAAACTTGTCTGCTCCACATCGGAAGCATTTTAGTCGAAGGCCGCGCAGCATaGTGGTCTTGCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: ALPVQSQTCLLHIGSILVEGRAA*WSCSPS
Trigger: AGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTC...GACTAAAATGCTTCCGATGTGGAGCAGACAAGTTTGACTCTGAACAGGAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR GCA 90 bp CCAGGCAACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTGCAGCTGAGAAGCATCCATTaGAGAGGACAGCTGCACAAA +
Preference number: 4 (lower is better)
Translates to: PGNPHKGNFFKVGGRTLQLRSIH*RGQLHK
Trigger: TTTGTGCAGCTGTCCTCTGCAATGGATGCTTCTCAG...CTGCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGTTGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp CATGCCCTTAAAGAGACAGGCGGTAACAGCGAATTCGGGAGATGGACCACTTCTAGCAAAGCCAGCGTCTaGTGCAGCAGATTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: HALKETGGNSEFGRWTTSSKASV*CSRFSP
Trigger: AGGAGAGAATCTGCTGCAGCAGACGCTGGCTTTGCT...AGAAGTGGTCCATCTCCCGAATTCGCTGTTACCGCCTGTCTCTTTAAGGGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp TTCACCCTAAGATCTATTAACAGCACAAGGCATGCCCTTAAAGAGACAGGCGGTCAGCCGCTGAGGTGGTaGTCACTGCTGTGCCTGATG +
Preference number: 4 (lower is better)
Translates to: FTLRSINSTRHALKETGGQPLRW*SLLCLM
Trigger: CATCAGGCACAGCAGTGACCACCACCTCAGCGGCTG...ACCGCCTGTCTCTTTAAGGGCATGCCTTGTGCTGTTAATAGATCTTAGGGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp AGACAGTGCTGTCATGATGGAATCCACCACAGTGTGCGGAGCTATGTTCCGAAGTCTCCCTCTCGTCACTaGTGTCATGCCTATAGTCGT +
Preference number: 4 (lower is better)
Translates to: RQCCHDGIHHSVRSYVPKSPSRH*CHAYSR
Trigger: ACGACTATAGGCATGACATCAGTGACGAGAGGGAGA...CTTCGGAACATAGCTCCGCACACTGTGGTGGATTCCATCATGACAGCACTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR TCA 90 bp GGTAACAGCGAATTCGGGAGATGGACCACTTCTTGTGCTCCTTGTCATCTCTCTAGAGTTGCTGGTGCCTaGCTAGGGCATCTTTGTTCG +
Preference number: 4 (lower is better)
Translates to: GNSEFGRWTTSCAPCHLSRVAGA*LGHLCS
Trigger: CGAACAAAGATGCCCTAGTCAGGCACCAGCAACTCT...AGAGAGATGACAAGGAGCACAAGAAGTGGTCCATCTCCCGAATTCGCTGTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp TCTATTAACAGCACAAGGCATGCCCTTAAAGAGACAGGCGGTAACAGCGAATTCCTGAGTCCCTCCGCCTaGTTCGGGATTCACGCTCAT +
Preference number: 4 (lower is better)
Translates to: SINSTRHALKETGGNSEFLSPSA*FGIHAH
Trigger: ATGAGCGTGAATCCCGAAGCAGGCGGAGGGACTCAG...GAATTCGCTGTTACCGCCTGTCTCTTTAAGGGCATGCCTTGTGCTGTTAATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp CCGACTCTGTGGTTCCAGGAGGCACTTCCTGTTCAGAGTCAAACTTGTCTGCTCCTGAGAAGCATCCATTaGAGAGGACAGCTGCACAAA +
Preference number: 4 (lower is better)
Translates to: PTLWFQEALPVQSQTCLLLRSIH*RGQLHK
Trigger: TTTGTGCAGCTGTCCTCTGCAATGGATGCTTCTCAG...GAGCAGACAAGTTTGACTCTGAACAGGAAGTGCCTCCTGGAACCACAGAGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR GCA 90 bp CATGCCCTTAAAGAGACAGGCGGTAACAGCGAATTCGGGAGATGGACCACTTCTCTTCTCCCGTCTTTCTaGAGCTCGGTCTCGGTATTT +
Preference number: 4 (lower is better)
Translates to: HALKETGGNSEFGRWTTSLLPSF*SSVSVF
Trigger: AAATACCGAGACCGAGCTGCAGAAAGACGGGAGAAG...AGAAGTGGTCCATCTCCCGAATTCGCTGTTACCGCCTGTCTCTTTAAGGGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp GGCTCAGACATGCTTGACCCACCTACCCACCCAAGAATAAAGAGACACAGGACACATCAAACTGCTTCTTaGGCTTGGGCTCTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GSDMLDPPTHPRIKRHRTHQTAS*AWALEV
Trigger: AACCTCCAGAGCCCAAGCGCAAGAAGCAGTTTGATG...TGTCCTGTGTCTCTTTATTCTTGGGTGGGTAGGTGGGTCAAGCATGTCTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp CACCAGGCAACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTGCTGTTACTGTGGTCAATaGCATCTTTGGTGGGTTGCT +
Preference number: 4 (lower is better)
Translates to: HQATHIRGTSLRWEGEPCCYCGQ*HLWWVA
Trigger: AGCAACCCACCAAAGATGGCATTGACCACAGTAACA...GCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGTTGCCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp TCGCTCTCTGTGATGGTGATGGGAAGGCCGCGCAGCATGATGGTCTTGCTCTCCAAGACTAAAAAGCTCTaGACTGTCATAGTCTCGGTA +
Preference number: 4 (lower is better)
Translates to: SLSVMVMGRPRSMMVLLSKTKKL*TVIVSV
Trigger: TACCGAGACTATGACAGTCCAGAGCTTTTTAGTCTT...GGAGAGCAAGACCATCATGCTGCGCGGCCTTCCCATCACCATCACAGAGAGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000438369.5
CDS-3UTR TCA 90 bp ACATTACACTATGTACACTGGAGTATAAACAATCCACTGTCCTCTCCGGTCTGTGAAGGCCGCGCAGCATaGTGGTCTTGCTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TLHYVHWSINNPLSSPVCEGRAA*WSCSPS
Trigger: AGAGGGAGAGCAAGACCATCATGCTGCGCGGCCTTC...ACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTGTACATAGTGTAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp ATGGACCACAACATAGGCTACACATGTAAACACGCTACATTACACTATGTACACCTCACATCCGCAGGCTaGGGGCCTTCGAAGGACTCC +
Preference number: 4 (lower is better)
Translates to: MDHNIGYTCKHATLHYVHLTSAG*GPSKDS
Trigger: GGAGTCCTTCGAAGGCCCTCAGCCTGCGGATGTGAG...GTGTACATAGTGTAATGTAGCGTGTTTACATGTGTAGCCTATGTTGTGGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp ACTTCTTTAAGGTGGGAGGGAGAACCCTGCAGAATGAAGTGGTTCACCCTAAGACTACAGAGAAAGCGCTaGCGCGGTTACCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: TSLRWEGEPCRMKWFTLRLQRKR*RGYHLR
Trigger: TCTCAGATGGTAACCGCGTCAGCGCTTTCTCTGTAG...TCTTAGGGTGAACCACTTCATTCTGCAGGGTTCTCCCTCCCACCTTAAAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp TGTACACTGGAGTATAAACAATCCACTGTCCTCTCCGGTCTGTTCACAAGCCCTAAACCCCTAGGAATGTaGGGGGCTGATGGACCACAA +
Preference number: 4 (lower is better)
Translates to: CTLEYKQSTVLSGLFTSPKPLGM*GADGPQ
Trigger: TTGTGGTCCATCAGCCCCTCACATTCCTAGGGGTTT...AGGGCTTGTGAACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp GGTAACAGCGAATTCGGGAGATGGACCACTTCTTGTGCTCCTTGTCATCTCTCTCGCGTAAGGAGACAGTaGTGTCATGATGGAATCCAC +
Preference number: 4 (lower is better)
Translates to: GNSEFGRWTTSCAPCHLSRVRRQ*CHDGIH
Trigger: GTGGATTCCATCATGACAGCACTGTCTCCTTACGCG...AGAGAGATGACAAGGAGCACAAGAAGTGGTCCATCTCCCGAATTCGCTGTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp CATGCCCTTAAAGAGACAGGCGGTAACAGCGAATTCGGGAGATGGACCACTTCTAATTCTGGGATGAGCTaGTGCCTTTCAGCTAAGGCT +
Preference number: 4 (lower is better)
Translates to: HALKETGGNSEFGRWTTSNSGMS*CLSAKA
Trigger: AGCCTTAGCTGAAAGGCAGCAGCTCATCCCAGAATT...AGAAGTGGTCCATCTCCCGAATTCGCTGTTACCGCCTGTCTCTTTAAGGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp CTAAGATCTATTAACAGCACAAGGCATGCCCTTAAAGAGACAGGCGGTAACAGCGTGCCGGCATCAAACTaGTTCTTGCGCTTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LRSINSTRHALKETGGNSVPASN*FLRLGS
Trigger: AGAGCCCAAGCGCAAGAAGCAGTTTGATGCCGGCAC...GCTGTTACCGCCTGTCTCTTTAAGGGCATGCCTTGTGCTGTTAATAGATCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp TGTACACTGGAGTATAAACAATCCACTGTCCTCTCCGGTCTGTTCACAAGCCCTACAAACCATATGCGCTaGCTTTGGCTCCTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: CTLEYKQSTVLSGLFTSPTNHMR*LWLLGQ
Trigger: CTGGCCTAGGAGCCAAAGGCAGCGCATATGGTTTGT...AGGGCTTGTGAACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp CATGCCCTTAAAGAGACAGGCGGTAACAGCGAATTCGGGAGATGGACCACTTCTTTCACGCTCTCTCTCTaGACTGTCATAGTCTCGGTA +
Preference number: 4 (lower is better)
Translates to: HALKETGGNSEFGRWTTSFTLSL*TVIVSV
Trigger: TACCGAGACTATGACAGTCCAGAGAGAGAGCGTGAA...AGAAGTGGTCCATCTCCCGAATTCGCTGTTACCGCCTGTCTCTTTAAGGGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp ACTTCTTTAAGGTGGGAGGGAGAACCCTGCAGAATGAAGTGGTTCACCCTAAGAACTGAACCGACTCTGTaGTTCCAGGAGGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: TSLRWEGEPCRMKWFTLRTEPTL*FQEALP
Trigger: AGGAAGTGCCTCCTGGAACCACAGAGTCGGTTCAGT...TCTTAGGGTGAACCACTTCATTCTGCAGGGTTCTCCCTCCCACCTTAAAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp CACTGGAGTATAAACAATCCACTGTCCTCTCCGGTCTGTTCACAAGCCCTCTGGATTTCGCACCAATTCTaGGATGAGCTGCTGCCTTTC +
Preference number: 4 (lower is better)
Translates to: HWSINNPLSSPVCSQALWISHQF*DELLPF
Trigger: GAAAGGCAGCAGCTCATCCCAGAATTGGTGCGAAAT...CCAGAGGGCTTGTGAACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp CTGCGATATCTAAAGGCAAGACTGCATGTCTGGCCAGGAGAGAAAAAGCTGAAGGGTCATCCCTGTCTATaGTGGAACCGTATCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LRYLKARLHVWPGEKKLKGHPCL*WNRIFH
Trigger: GTGGAAGATACGGTTCCATCATAGACAGGGATGACC...CTTCAGCTTTTTCTCTCCTGGCCAGACATGCAGTCTTGCCTTTAGATATCGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR TCA 90 bp CACCACAGTGTGCGGAGCTATGTTCCGAAGAATGATCGTATCACAGTAGTAATCCTACAGAGAAAGCGCTaGCGCGGTTACCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: HHSVRSYVPKNDRITVVILQRKR*RGYHLR
Trigger: TCTCAGATGGTAACCGCGTCAGCGCTTTCTCTGTAG...GATTACTACTGTGATACGATCATTCTTCGGAACATAGCTCCGCACACTGTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR TCA 90 bp CTAAGATCTATTAACAGCACAAGGCATGCCCTTAAAGAGACAGGCGGTAACAGCGCACCAATTCTGGGATaGGCTGCTGCCTTTCAGCTA +
Preference number: 4 (lower is better)
Translates to: LRSINSTRHALKETGGNSAPILG*AAAFQL
Trigger: TAGCTGAAAGGCAGCAGCTCATCCCAGAATTGGTGC...GCTGTTACCGCCTGTCTCTTTAAGGGCATGCCTTGTGCTGTTAATAGATCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp ACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTGCAGAATGAAGTCCATGTTTTGCTTGTaGAGGTCTGAGAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: THIRGTSLRWEGEPCRMKSMFCL*RSESCW
Trigger: CCAGCAACTCTCAGACCTTCACAAGCAAAACATGGA...CTTCATTCTGCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp GCACTTCCTGTTCAGAGTCAAACTTGTCTGCTCCACATCGGAAGCATTTTAGTCGGACAGCTGCACAAATaGGAAGCCTCTGTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: ALPVQSQTCLLHIGSILVGQLHK*EASVLL
Trigger: CAGCAGAACAGAGGCTTCGCATTTGTGCAGCTGTCC...GACTAAAATGCTTCCGATGTGGAGCAGACAAGTTTGACTCTGAACAGGAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR GCA 90 bp GCAAGGAACAAGCCGCCTGAACTAAATGCCACTCCATTTGATTCCACGCTTAAAACTAGATTAGACAGCTaGAGGACACCACTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: ARNKPPELNATPFDSTLKTRLDS*RTPLPG
Trigger: GCCTGGGAGTGGTGTCCTGCAGCTGTCTAATCTAGT...TTTAAGCGTGGAATCAAATGGAGTGGCATTTAGTTCAGGCGGCTTGTTCCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR CCA 90 bp TGTACACTGGAGTATAAACAATCCACTGTCCTCTCCGGTCTGTTCACAAGCCCTGCTAGACTCTGCAGCTaGCACGTAGGTCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: CTLEYKQSTVLSGLFTSPARLCS*HVGLFF
Trigger: GAAAAAGAGACCTACGTGCCAGCTGCAGAGTCTAGC...AGGGCTTGTGAACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp TCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACAGCATCTCAAGGTCTGAGAGTTGCTaGTGCCTGACTAGGGCATCT +
Preference number: 4 (lower is better)
Translates to: SQQMTEVALVSHTTYSISRSESC*CLTRAS
Trigger: AGATGCCCTAGTCAGGCACCAGCAACTCTCAGACCT...TGAGATGCTGTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp GCAAGGAACAAGCCGCCTGAACTAAATGCCACTCCATTTGATTCCACGCTTAAAAGGAGGGATGTGTGCTaGGAGACTCCAAACTACCAG +
Preference number: 4 (lower is better)
Translates to: ARNKPPELNATPFDSTLKRRDVC*ETPNYQ
Trigger: CTGGTAGTTTGGAGTCTCCCAGCACACATCCCTCCT...TTTAAGCGTGGAATCAAATGGAGTGGCATTTAGTTCAGGCGGCTTGTTCCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR TCA 90 bp CACCACAGTGTGCGGAGCTATGTTCCGAAGAATGATCGTATCACAGTAGTAATCGAGACAGTGCTGTCATaGTGGAATCCACCACAGTGT +
Preference number: 4 (lower is better)
Translates to: HHSVRSYVPKNDRITVVIETVLS*WNPPQC
Trigger: ACACTGTGGTGGATTCCATCATGACAGCACTGTCTC...GATTACTACTGTGATACGATCATTCTTCGGAACATAGCTCCGCACACTGTGGTG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR TCA 90 bp CTAAGATCTATTAACAGCACAAGGCATGCCCTTAAAGAGACAGGCGGTAACAGCGACGCGGTTACCATCTaGGAGGACCAAGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LRSINSTRHALKETGGNSDAVTI*EDQVFS
Trigger: AGAAAAGACTTGGTCCTCTCAGATGGTAACCGCGTC...GCTGTTACCGCCTGTCTCTTTAAGGGCATGCCTTGTGCTGTTAATAGATCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp GTGAATACTGAGCATATTGGGCATAGCCATCTTGACCTGGTTGCAGATAACTGTTTGAGACTGGGTGGATaGCCACTGAGCAGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: VNTEHIGHSHLDLVADNCLRLGG*PLSSSN
Trigger: ATTGCTGCTGCTCAGTGGTCATCCACCCAGTCTCAA...ACAGTTATCTGCAACCAGGTCAAGATGGCTATGCCCAATATGCTCAGTATTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR TCA 90 bp ACATTACACTATGTACACTGGAGTATAAACAATCCACTGTCCTCTCCGGTCTGTGGAGCCGTAATGCCTTaGCACTTTCGTCCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: TLHYVHWSINNPLSSPVCGAVMP*HFRPKP
Trigger: TGGCTTGGGACGAAAGTGTCAAGGCATTACGGCTCC...ACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTGTACATAGTGTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp GGCTCAGACATGCTTGACCCACCTACCCACCCAAGAATAAAGAGACACAGGACAAGAGTCAAACTTGTCTaGTCCACATCGGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: GSDMLDPPTHPRIKRHRTRVKLV*STSEAF
Trigger: AAATGCTTCCGATGTGGAGCAGACAAGTTTGACTCT...TGTCCTGTGTCTCTTTATTCTTGGGTGGGTAGGTGGGTCAAGCATGTCTGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp AACCGACTCTGTGGTTCCAGGAGGCACTTCCTGTTCAGAGTCAAACTTGTCTGCAGAGTCAAACTTGTCTaGTCCACATCGGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: NRLCGSRRHFLFRVKLVCRVKLV*STSEAF
Trigger: AAATGCTTCCGATGTGGAGCAGACAAGTTTGACTCT...GCAGACAAGTTTGACTCTGAACAGGAAGTGCCTCCTGGAACCACAGAGTCGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR GCA 90 bp GCAAGGAACAAGCCGCCTGAACTAAATGCCACTCCATTTGATTCCACGCTTAAACCACTGCTTCAACACTaGGTGACAAAGCCAATTGGG +
Preference number: 4 (lower is better)
Translates to: ARNKPPELNATPFDSTLKPLLQH*VTKPIG
Trigger: CCCAATTGGCTTTGTCACGCAGTGTTGAAGCAGTGG...TTTAAGCGTGGAATCAAATGGAGTGGCATTTAGTTCAGGCGGCTTGTTCCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR CCA 90 bp ACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTGCAGAATGAAGAGTAGTATTGCGAGTTaGGGTCATAATAGAGCCCTG +
Preference number: 4 (lower is better)
Translates to: THIRGTSLRWEGEPCRMKSSIAS*GHNRAL
Trigger: CAGGGCTCTATTATGACCCCAACTCGCAATACTACT...CTTCATTCTGCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp CCCATTTCTCAAGGTATTTCTTTTGTAAAGGAGCCAGATTTGGCAACTAGACTGCATATGCGCTGCCTTTaGCTCCTAGGCCAGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PISQGISFVKEPDLATRLHMRCL*LLGQLP
Trigger: AGGGAGCTGGCCTAGGAGCCAAAGGCAGCGCATATG...CAGTCTAGTTGCCAAATCTGGCTCCTTTACAAAAGAAATACCTTGAGAAATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp TCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACAGCATCTCAAGCGAATTCGGGAGATaGACCACTTCTTGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: SQQMTEVALVSHTTYSISSEFGR*TTSCAP
Trigger: AGGAGCACAAGAAGTGGTCCATCTCCCGAATTCGCT...TGAGATGCTGTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp TCTATTAACAGCACAAGGCATGCCCTTAAAGAGACAGGCGGTAACAGCGAATTCACCATAGTCACCATCTaGATGGTAGCCATCTTCGGA +
Preference number: 4 (lower is better)
Translates to: SINSTRHALKETGGNSEFTIVTI*MVAIFG
Trigger: TCCGAAGATGGCTACCATTCAGATGGTGACTATGGT...GAATTCGCTGTTACCGCCTGTCTCTTTAAGGGCATGCCTTGTGCTGTTAATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp GATTGCTATAATGCATTGCAATGTGCTTTCCTTGAATCACCAACTTTTTCTGTTCTCACATCCGCAGGCTaGGGGCCTTCGAAGGACTCC +
Preference number: 4 (lower is better)
Translates to: DCYNALQCAFLESPTFSVLTSAG*GPSKDS
Trigger: GGAGTCCTTCGAAGGCCCTCAGCCTGCGGATGTGAG...AACAGAAAAAGTTGGTGATTCAAGGAAAGCACATTGCAATGCATTATAGCAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR TCA 90 bp TTACTTATAAAAATGCCGCCACAGACTTTCACTATGTTCTCTTCACTGTCAAATCTCACATCCGCAGGCTaGGGGCCTTCGAAGGACTCC +
Preference number: 4 (lower is better)
Translates to: LLIKMPPQTFTMFSSLSNLTSAG*GPSKDS
Trigger: GGAGTCCTTCGAAGGCCCTCAGCCTGCGGATGTGAG...ATTTGACAGTGAAGAGAACATAGTGAAAGTCTGTGGCGGCATTTTTATAAGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR TCA 90 bp GAAAAGACATCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACGAGACAGTGCTGTCATaGTGGAATCCACCACAGTGT +
Preference number: 4 (lower is better)
Translates to: EKTSQQMTEVALVSHTTYETVLS*WNPPQC
Trigger: ACACTGTGGTGGATTCCATCATGACAGCACTGTCTC...GTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp GCAAGGAACAAGCCGCCTGAACTAAATGCCACTCCATTTGATTCCACGCTTAAAAAGGAACAAGCCGCCTaGACTAAATGCCACTCCATT +
Preference number: 4 (lower is better)
Translates to: ARNKPPELNATPFDSTLKKEQAA*TKCHSI
Trigger: AATGGAGTGGCATTTAGTTCAGGCGGCTTGTTCCTT...TTTAAGCGTGGAATCAAATGGAGTGGCATTTAGTTCAGGCGGCTTGTTCCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR GCA 90 bp TCTATTAACAGCACAAGGCATGCCCTTAAAGAGACAGGCGGTAACAGCGAATTCGCTCGTAATTCACAGTaGCGGCATCAAACTGCTTCT +
Preference number: 4 (lower is better)
Translates to: SINSTRHALKETGGNSEFARNSQ*RHQTAS
Trigger: AGAAGCAGTTTGATGCCGGCACTGTGAATTACGAGC...GAATTCGCTGTTACCGCCTGTCTCTTTAAGGGCATGCCTTGTGCTGTTAATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp ACTTCTTTAAGGTGGGAGGGAGAACCCTGCAGAATGAAGTGGTTCACCCTAAGAATGGACCACTTCTTGTaGTCCTTGTCATCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: TSLRWEGEPCRMKWFTLRMDHFL*SLSSLS
Trigger: AGAGAGAGATGACAAGGAGCACAAGAAGTGGTCCAT...TCTTAGGGTGAACCACTTCATTCTGCAGGGTTCTCCCTCCCACCTTAAAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp GGTAACAGCGAATTCGGGAGATGGACCACTTCTTGTGCTCCTTGTCATCTCTCTAAGCCTCTGTTCTGCTaGGTCTGTTTGTCTTTTATG +
Preference number: 4 (lower is better)
Translates to: GNSEFGRWTTSCAPCHLSKPLFC*VCLSFM
Trigger: CATAAAAGACAAACAGACCCAGCAGAACAGAGGCTT...AGAGAGATGACAAGGAGCACAAGAAGTGGTCCATCTCCCGAATTCGCTGTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp ATTACACTATGTACACTGGAGTATAAACAATCCACTGTCCTCTCCGGTCTGTTCCACTTTGAGACTGGGTaGATGACCACTGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ITLCTLEYKQSTVLSGLFHFETG*MTTEQQ
Trigger: CTGCTGCTCAGTGGTCATCCACCCAGTCTCAAAGTG...GAACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTGTACATAGTGTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp TCTATTAACAGCACAAGGCATGCCCTTAAAGAGACAGGCGGTAACAGCGAATTCAGCGTTCCATGTCTTTaGCAATCTGCTGGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SINSTRHALKETGGNSEFSVPCL*QSAGLF
Trigger: AAACAGCCCAGCAGATTGCCAAAGACATGGAACGCT...GAATTCGCTGTTACCGCCTGTCTCTTTAAGGGCATGCCTTGTGCTGTTAATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp CCCATTTCTCAAGGTATTTCTTTTGTAAAGGAGCCAGATTTGGCAACTAGACTGCTTGCGCTTGGGCTCTaGAGGTTCTGGAATGCCGTA +
Preference number: 4 (lower is better)
Translates to: PISQGISFVKEPDLATRLLALGL*RFWNAV
Trigger: TACGGCATTCCAGAACCTCCAGAGCCCAAGCGCAAG...CAGTCTAGTTGCCAAATCTGGCTCCTTTACAAAAGAAATACCTTGAGAAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp GAAAAGACATCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACGGAACTTCTTTAAGGTaGGAGGGAGAACCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: EKTSQQMTEVALVSHTTYGTSLR*EGEPCR
Trigger: TCTGCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCC...GTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp AAATGCCGCCACAGACTTTCACTATGTTCTCTTCACTGTCAAATGGAGAGTTTGTGGGAGGATCAAGGGTaGGGGTGGTTTGACACTATC +
Preference number: 4 (lower is better)
Translates to: KCRHRLSLCSLHCQMESLWEDQG*GWFDTI
Trigger: GATAGTGTCAAACCACCCCCACCCTTGATCCTCCCA...CAAACTCTCCATTTGACAGTGAAGAGAACATAGTGAAAGTCTGTGGCGGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469838.5
3UTR CAA 72 bp ATACTGAGCATATTGGGCATAGCCATCTTGACCTGGTaGCAGATAACTGTAGTCAACACTGCCTCCTTCACC +
Preference number: 4 (lower is better)
Translates to: ILSILGIAILTW*QITVVNTASFT
Trigger: GGTGAAGGAGGCAGTGTTGACTACAGTTATCTGCAACCAGGTCAAGATGGCTATGCCCAATATGCTCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395174.6
3UTR CAA 72 bp GAAGACCGGTCTGAGCAGTTACGCCTCCAGGAGGCTTaGTGGTCTTCAGGCAGAAATAAGGAATTACTTATA +
Preference number: 4 (lower is better)
Translates to: EDRSEQLRLQEA*WSSGRNKELLI
Trigger: TATAAGTAATTCCTTATTTCTGCCTGAAGACCACAAAGCCTCCTGGAGGCGTAACTGCTCAGACCGGTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR TCA 90 bp ACATTACACTATGTACACTGGAGTATAAACAATCCACTGTCCTCTCCGGTCTGTAGATCTTTTGTAATCTaGGTCCCTCCGCCTGCTTCG +
Preference number: 4 (lower is better)
Translates to: TLHYVHWSINNPLSSPVCRSFVI*VPPPAS
Trigger: CGAAGCAGGCGGAGGGACTCAGATTACAAAAGATCT...ACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTGTACATAGTGTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp AAATGCCGCCACAGACTTTCACTATGTTCTCTTCACTGTCAAATGGAGAGTTTGTCTCCCTCTCGTCACTaGTGTCATGCCTATAGTCGT +
Preference number: 4 (lower is better)
Translates to: KCRHRLSLCSLHCQMESLSPSRH*CHAYSR
Trigger: ACGACTATAGGCATGACATCAGTGACGAGAGGGAGA...CAAACTCTCCATTTGACAGTGAAGAGAACATAGTGAAAGTCTGTGGCGGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR TCA 90 bp GTCTGGGATTGCTATAATGCATTGCAATGTGCTTTCCTTGAATCACCAACTTTTTGGGTGGATGACCACTaGGCAGCAGCAATAGCCGTA +
Preference number: 4 (lower is better)
Translates to: VWDCYNALQCAFLESPTFWVDDH*AAAIAV
Trigger: TACGGCTATTGCTGCTGCTCAGTGGTCATCCACCCA...AAAAGTTGGTGATTCAAGGAAAGCACATTGCAATGCATTATAGCAATCCCAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR TCA 90 bp AAATGCCGCCACAGACTTTCACTATGTTCTCTTCACTGTCAAATGGAGAGTTTGTGCTTCAACACTGCGTaGCAAAGCCAATTGGGAAGC +
Preference number: 4 (lower is better)
Translates to: KCRHRLSLCSLHCQMESLCFNTA*QSQLGS
Trigger: GCTTCCCAATTGGCTTTGTCACGCAGTGTTGAAGCA...CAAACTCTCCATTTGACAGTGAAGAGAACATAGTGAAAGTCTGTGGCGGCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR TCA 90 bp CTGCGATATCTAAAGGCAAGACTGCATGTCTGGCCAGGAGAGAAAAAGCTGAAGTTCCTTTATAACAGGTaGATCTCTCTCCCACTGCTT +
Preference number: 4 (lower is better)
Translates to: LRYLKARLHVWPGEKKLKFLYNR*ISLPLL
Trigger: AAGCAGTGGGAGAGAGATTCACCTGTTATAAAGGAA...CTTCAGCTTTTTCTCTCCTGGCCAGACATGCAGTCTTGCCTTTAGATATCGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR TCA 90 bp CTGCGATATCTAAAGGCAAGACTGCATGTCTGGCCAGGAGAGAAAAAGCTGAAGGAAAGCAGACTCACATaGACCTTGTATATGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LRYLKARLHVWPGEKKLKESRLT*TLYMFW
Trigger: CCAGAACATATACAAGGTTCATGTGAGTCTGCTTTC...CTTCAGCTTTTTCTCTCCTGGCCAGACATGCAGTCTTGCCTTTAGATATCGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR GCA 90 bp AGAAAGCAGACTCACATGAACCTTGTATATGTTCTGGATTTACTAGGATGGTATCTGAGTCCCTCCGCCTaGTTCGGGATTCACGCTCAT +
Preference number: 4 (lower is better)
Translates to: RKQTHMNLVYVLDLLGWYLSPSA*FGIHAH
Trigger: ATGAGCGTGAATCCCGAAGCAGGCGGAGGGACTCAG...ATACCATCCTAGTAAATCCAGAACATATACAAGGTTCATGTGAGTCTGCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR GCA 90 bp TCCTGTTCAGAGTCAAACTTGTCTGCTCCACATCGGAAGCATTTTAGTCTTTTCCGCGTAAGGAGACAGTaGTGTCATGATGGAATCCAC +
Preference number: 4 (lower is better)
Translates to: SCSESNLSAPHRKHFSLFRVRRQ*CHDGIH
Trigger: GTGGATTCCATCATGACAGCACTGTCTCCTTACGCG...GAAAAGACTAAAATGCTTCCGATGTGGAGCAGACAAGTTTGACTCTGAACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR GCA 90 bp TCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACAGCATCTCAAACTGTAGTCAACACTaGCTCCTTCACCACTTTGAG +
Preference number: 4 (lower is better)
Translates to: SQQMTEVALVSHTTYSISNCSQH*LLHHFE
Trigger: CTCAAAGTGGTGAAGGAGGCAGTGTTGACTACAGTT...TGAGATGCTGTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp ATTACACTATGTACACTGGAGTATAAACAATCCACTGTCCTCTCCGGTCTGTTCCTGGAGGTTCTGGAATaGCGTACTTCTCCCGTCTTT +
Preference number: 4 (lower is better)
Translates to: ITLCTLEYKQSTVLSGLFLEVLE*RTSPVF
Trigger: AAAGACGGGAGAAGTACGGCATTCCAGAACCTCCAG...GAACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTGTACATAGTGTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp CTGCGATATCTAAAGGCAAGACTGCATGTCTGGCCAGGAGAGAAAAAGCTGAAGGCAAACTTCCCAGAATaGACTTGGTTAAAGGCATTC +
Preference number: 4 (lower is better)
Translates to: LRYLKARLHVWPGEKKLKANFPE*TWLKAF
Trigger: GAATGCCTTTAACCAAGTGCATTCTGGGAAGTTTGC...CTTCAGCTTTTTCTCTCCTGGCCAGACATGCAGTCTTGCCTTTAGATATCGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR CCA 90 bp GGGATACTTGTGTTAGTCAGTTCCTTTATAACAGGTGAATCTCTCTCCCACTGCTTCACGCTCTCTCTCTaGACTGTCATAGTCTCGGTA +
Preference number: 4 (lower is better)
Translates to: GILVLVSSFITGESLSHCFTLSL*TVIVSV
Trigger: TACCGAGACTATGACAGTCCAGAGAGAGAGCGTGAA...GCAGTGGGAGAGAGATTCACCTGTTATAAAGGAACTGACTAACACAAGTATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR CCA 90 bp TCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACAGCATCTCACATCATACTGGTAAGTaGACGTGTCAGGTACTGCAT +
Preference number: 4 (lower is better)
Translates to: SQQMTEVALVSHTTYSISHHTGK*TCQVLH
Trigger: ATGCAGTACCTGACACGTCCACTTACCAGTATGATG...TGAGATGCTGTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp AAAGACATCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACAGTCTTTGGCAATCTGCTaGGCTGTTTTGCTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: KDITTNDRGGFGVTYHLQSLAIC*AVLLLG
Trigger: ACCCAAGAGCAAAACAGCCCAGCAGATTGCCAAAGA...CTGTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp TTCACCCTAAGATCTATTAACAGCACAAGGCATGCCCTTAAAGAGACAGGCGGTCAATGCCATCTTTGGTaGGTTGCTCGTAATTCACAG +
Preference number: 4 (lower is better)
Translates to: FTLRSINSTRHALKETGGQCHLW*VARNSQ
Trigger: CTGTGAATTACGAGCAACCCACCAAAGATGGCATTG...ACCGCCTGTCTCTTTAAGGGCATGCCTTGTGCTGTTAATAGATCTTAGGGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp GAAAAGACATCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACCTGCTGATAATCCTGTaGATACTGAGCATATTGGGC +
Preference number: 4 (lower is better)
Translates to: EKTSQQMTEVALVSHTTYLLIIL*ILSILG
Trigger: GCCCAATATGCTCAGTATTCACAGGATTATCAGCAG...GTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp GTGAATACTGAGCATATTGGGCATAGCCATCTTGACCTGGTTGCAGATAACTGTCTGCTGATAATCCTGTaGATACTGAGCATATTGGGC +
Preference number: 4 (lower is better)
Translates to: VNTEHIGHSHLDLVADNCLLIIL*ILSILG
Trigger: GCCCAATATGCTCAGTATTCACAGGATTATCAGCAG...ACAGTTATCTGCAACCAGGTCAAGATGGCTATGCCCAATATGCTCAGTATTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR TCA 90 bp TCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACAGCATCTCACTTCCCTCAAGGAATTaGCAGGCTGAAAGCTATTTT +
Preference number: 4 (lower is better)
Translates to: SQQMTEVALVSHTTYSISLPSRN*QAESYF
Trigger: AAAATAGCTTTCAGCCTGTCAATTCCTTGAGGGAAG...TGAGATGCTGTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp GGGATACTTGTGTTAGTCAGTTCCTTTATAACAGGTGAATCTCTCTCCCACTGCAGGGTGGGGGTGGTTTaGCACTATCAAACAGATTTA +
Preference number: 4 (lower is better)
Translates to: GILVLVSSFITGESLSHCRVGVV*HYQTDL
Trigger: TAAATCTGTTTGATAGTGTCAAACCACCCCCACCCT...GCAGTGGGAGAGAGATTCACCTGTTATAAAGGAACTGACTAACACAAGTATCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR GCA 90 bp CCCATTTCTCAAGGTATTTCTTTTGTAAAGGAGCCAGATTTGGCAACTAGACTGTGGTGGTCACTGCTGTaGCTGATGCAGATGATGCAT +
Preference number: 4 (lower is better)
Translates to: PISQGISFVKEPDLATRLWWSLL*LMQMMH
Trigger: ATGCATCATCTGCATCAGGCACAGCAGTGACCACCA...CAGTCTAGTTGCCAAATCTGGCTCCTTTACAAAAGAAATACCTTGAGAAATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp ATGGACCACAACATAGGCTACACATGTAAACACGCTACATTACACTATGTACACAAAGCCAGCGTCTGCTaGAGCAGATTCTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: MDHNIGYTCKHATLHYVHKASVC*SRFSPF
Trigger: GAAAGGAGAGAATCTGCTGCAGCAGACGCTGGCTTT...GTGTACATAGTGTAATGTAGCGTGTTTACATGTGTAGCCTATGTTGTGGTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp ATGGACCACAACATAGGCTACACATGTAAACACGCTACATTACACTATGTACACTCTGAGAGTTGCTGGTaGCTGACTAGGGCATCTTTG +
Preference number: 4 (lower is better)
Translates to: MDHNIGYTCKHATLHYVHSESCW*LTRASL
Trigger: CAAAGATGCCCTAGTCAGGCACCAGCAACTCTCAGA...GTGTACATAGTGTAATGTAGCGTGTTTACATGTGTAGCCTATGTTGTGGTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp CATTCACCAGGCAACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCTATACACAAGGCTTTTaGCAAGAAAAGACATCACAA +
Preference number: 4 (lower is better)
Translates to: HSPGNPHKGNFFKVGGRTYTQGF*QEKTSQ
Trigger: TTGTGATGTCTTTTCTTGGCAAAAGCCTTGTGTATA...GGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGTTGCCTGGTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp GCACTTCCTGTTCAGAGTCAAACTTGTCTGCTCCACATCGGAAGCATTTTAGTCAAGCCTCTGTTCTGCTaGGTCTGTTTGTCTTTTATG +
Preference number: 4 (lower is better)
Translates to: ALPVQSQTCLLHIGSILVKPLFC*VCLSFM
Trigger: CATAAAAGACAAACAGACCCAGCAGAACAGAGGCTT...GACTAAAATGCTTCCGATGTGGAGCAGACAAGTTTGACTCTGAACAGGAAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR CCA 90 bp CTTGTTACAAAGCCAATCTTCAAACTTAGGTCTGGGATTGCTATAATGCATTGCCACTTTGAGACTGGGTaGATGACCACTGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LVTKPIFKLRSGIAIMHCHFETG*MTTEQQ
Trigger: CTGCTGCTCAGTGGTCATCCACCCAGTCTCAAAGTG...GCAATGCATTATAGCAATCCCAGACCTAAGTTTGAAGATTGGCTTTGTAACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR CCA 90 bp GAAAAGACATCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACGAGAGCCAGGTGGATTaGAGGTTTGATTATACAGCT +
Preference number: 4 (lower is better)
Translates to: EKTSQQMTEVALVSHTTYESQVD*RFDYTA
Trigger: AGCTGTATAATCAAACCTCCAATCCACCTGGCTCTC...GTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp GAAAAGACATCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACAGTCGGAGAGCCAGGTaGATTGGAGGTTTGATTATA +
Preference number: 4 (lower is better)
Translates to: EKTSQQMTEVALVSHTTYSRRAR*IGGLII
Trigger: TATAATCAAACCTCCAATCCACCTGGCTCTCCGACT...GTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp AAAGACATCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACAGGGTCAATGCCATCTTTaGTGGGTTGCTCGTAATTCA +
Preference number: 4 (lower is better)
Translates to: KDITTNDRGGFGVTYHLQGQCHL*WVARNS
Trigger: TGAATTACGAGCAACCCACCAAAGATGGCATTGACC...CTGTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp TGCATCAGATTCCAATCCTCCAGCTTGTTGTTGATAAAACTGCTGATAATCCTGACCATAGTCACCATCTaGATGGTAGCCATCTTCGGA +
Preference number: 4 (lower is better)
Translates to: CIRFQSSSLLLIKLLIILTIVTI*MVAIFG
Trigger: TCCGAAGATGGCTACCATTCAGATGGTGACTATGGT...CAGGATTATCAGCAGTTTTATCAACAACAAGCTGGAGGATTGGAATCTGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR TCA 90 bp TTTCATTCTGAATTCATGTGCTTGAAGACTGGGGGAATCAGGATGTTCTTTAGGACCATAGTCACCATCTaGATGGTAGCCATCTTCGGA +
Preference number: 4 (lower is better)
Translates to: FHSEFMCLKTGGIRMFFRTIVTI*MVAIFG
Trigger: TCCGAAGATGGCTACCATTCAGATGGTGACTATGGT...CCTAAAGAACATCCTGATTCCCCCAGTCTTCAAGCACATGAATTCAGAATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR TCA 90 bp CTTGTTACAAAGCCAATCTTCAAACTTAGGTCTGGGATTGCTATAATGCATTGCGACGCGGTTACCATCTaGGAGGACCAAGTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LVTKPIFKLRSGIAIMHCDAVTI*EDQVFS
Trigger: AGAAAAGACTTGGTCCTCTCAGATGGTAACCGCGTC...GCAATGCATTATAGCAATCCCAGACCTAAGTTTGAAGATTGGCTTTGTAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR TCA 90 bp ACATTACACTATGTACACTGGAGTATAAACAATCCACTGTCCTCTCCGGTCTGTAGACATCACAACAAATaGCAGAGGTGGCTTTGGTGT +
Preference number: 4 (lower is better)
Translates to: TLHYVHWSINNPLSSPVCRHHNK*QRWLWC
Trigger: ACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCT...ACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTGTACATAGTGTAATGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR TCA 90 bp TTTCATTCTGAATTCATGTGCTTGAAGACTGGGGGAATCAGGATGTTCTTTAGGCTGAATTCATGTGCTTaGAGACTGGGGGAATCAGGA +
Preference number: 4 (lower is better)
Translates to: FHSEFMCLKTGGIRMFFRLNSCA*RLGESG
Trigger: TCCTGATTCCCCCAGTCTTCAAGCACATGAATTCAG...CCTAAAGAACATCCTGATTCCCCCAGTCTTCAAGCACATGAATTCAGAATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR TCA 90 bp AAATGCCGCCACAGACTTTCACTATGTTCTCTTCACTGTCAAATGGAGAGTTTGGCAGCTTTACAAATGTaGCTTGACTTGGGGATCTTC +
Preference number: 4 (lower is better)
Translates to: KCRHRLSLCSLHCQMESLAALQM*LDLGIF
Trigger: GAAGATCCCCAAGTCAAGTCACATTTGTAAAGCTGC...CAAACTCTCCATTTGACAGTGAAGAGAACATAGTGAAAGTCTGTGGCGGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR CCA 90 bp GTGAATACTGAGCATATTGGGCATAGCCATCTTGACCTGGTTGCAGATAACTGTATAGCCATCTTGACCTaGTTGCAGATAACTGTAGTC +
Preference number: 4 (lower is better)
Translates to: VNTEHIGHSHLDLVADNCIAILT*LQITVV
Trigger: GACTACAGTTATCTGCAACCAGGTCAAGATGGCTAT...ACAGTTATCTGCAACCAGGTCAAGATGGCTATGCCCAATATGCTCAGTATTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR CCA 90 bp TTCGGGAGATGGACCACTTCTTGTGCTCCTTGTCATCTCTCTCTCTCTCTCTCTTTACACTATGTACACTaGAGTATAAACAATCCACTG +
Preference number: 4 (lower is better)
Translates to: FGRWTTSCAPCHLSLSLSLHYVH*SINNPL
Trigger: CAGTGGATTGTTTATACTCCAGTGTACATAGTGTAA...AGAGAGAGAGAGAGAGAGATGACAAGGAGCACAAGAAGTGGTCCATCTCCCGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp GAAATTGTTAAGGCAGCACTTGTTACAAAGCCAATCTTCAAACTTAGGTCTGGGAACTGTAGTCAACACTaGCTCCTTCACCACTTTGAG +
Preference number: 4 (lower is better)
Translates to: EIVKAALVTKPIFKLRSGNCSQH*LLHHFE
Trigger: CTCAAAGTGGTGAAGGAGGCAGTGTTGACTACAGTT...CCCAGACCTAAGTTTGAAGATTGGCTTTGTAACAAGTGCTGCCTTAACAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR GCA 90 bp ATGGACCACAACATAGGCTACACATGTAAACACGCTACATTACACTATGTACACCCTGCAGCATCTTGTTaGCAATGTTACTGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: MDHNIGYTCKHATLHYVHPAASC*QCYCGQ
Trigger: TTGACCACAGTAACATTGGCAACAAGATGCTGCAGG...GTGTACATAGTGTAATGTAGCGTGTTTACATGTGTAGCCTATGTTGTGGTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR GCA 90 bp AAATGCCGCCACAGACTTTCACTATGTTCTCTTCACTGTCAAATGGAGAGTTTGCATTCTGAATTCATGTaGTTGAAGACTGGGGGAATC +
Preference number: 4 (lower is better)
Translates to: KCRHRLSLCSLHCQMESLHSEFM*LKTGGI
Trigger: GATTCCCCCAGTCTTCAAGCACATGAATTCAGAATG...CAAACTCTCCATTTGACAGTGAAGAGAACATAGTGAAAGTCTGTGGCGGCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR CCA 90 bp ATTACACTATGTACACTGGAGTATAAACAATCCACTGTCCTCTCCGGTCTGTTCCCCTGCAGAATGAAGTaGTTCACCCTAAGATCTATT +
Preference number: 4 (lower is better)
Translates to: ITLCTLEYKQSTVLSGLFPCRMK*FTLRSI
Trigger: AATAGATCTTAGGGTGAACCACTTCATTCTGCAGGG...GAACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTGTACATAGTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CCA 90 bp GTTAGTCATTCTGACATATCCACTGCATCAAACAATGCTATCATGTCAAGAAAGCTTGATACTTTGCCATaGCAAGGAACAAGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: VSHSDISTASNNAIMSRKLDTLP*QGTSRL
Trigger: CAGGCGGCTTGTTCCTTGCCATGGCAAAGTATCAAG...CTTTCTTGACATGATAGCATTGTTTGATGCAGTGGATATGTCAGAATGACTAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR TCA 90 bp AAATGCCGCCACAGACTTTCACTATGTTCTCTTCACTGTCAAATGGAGAGTTTGGCAAACCTTTCATTCTaGATTCATGTGCTTGAAGAC +
Preference number: 4 (lower is better)
Translates to: KCRHRLSLCSLHCQMESLANLSF*IHVLED
Trigger: GTCTTCAAGCACATGAATTCAGAATGAAAGGTTTGC...CAAACTCTCCATTTGACAGTGAAGAGAACATAGTGAAAGTCTGTGGCGGCATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR TCA 90 bp GTTAGTCATTCTGACATATCCACTGCATCAAACAATGCTATCATGTCAAGAAAGTCTAGACTTGGTGAGTaGAGCAACCTGATTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VSHSDISTASNNAIMSRKSRLGE*SNLIGF
Trigger: GAAGCCAATCAGGTTGCTTCACTCACCAAGTCTAGA...CTTTCTTGACATGATAGCATTGTTTGATGCAGTGGATATGTCAGAATGACTAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR CCA 90 bp TTACTTATAAAAATGCCGCCACAGACTTTCACTATGTTCTCTTCACTGTCAAATGCAAGACTGCATGTCTaGCCAGGAGAGAAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLIKMPPQTFTMFSSLSNARLHV*PGEKKL
Trigger: CAGCTTTTTCTCTCCTGGCCAGACATGCAGTCTTGC...ATTTGACAGTGAAGAGAACATAGTGAAAGTCTGTGGCGGCATTTTTATAAGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR CCA 90 bp GTTAGTCATTCTGACATATCCACTGCATCAAACAATGCTATCATGTCAAGAAAGGATCAAGGGTGGGGGTaGTTTGACACTATCAAACAG +
Preference number: 4 (lower is better)
Translates to: VSHSDISTASNNAIMSRKDQGWG*FDTIKQ
Trigger: CTGTTTGATAGTGTCAAACCACCCCCACCCTTGATC...CTTTCTTGACATGATAGCATTGTTTGATGCAGTGGATATGTCAGAATGACTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR TCA 90 bp TTTCATTCTGAATTCATGTGCTTGAAGACTGGGGGAATCAGGATGTTCTTTAGGTCGAAGAACCATCAATaGCTTGCTTTGAACAGACTA +
Preference number: 4 (lower is better)
Translates to: FHSEFMCLKTGGIRMFFRSKNHQ*LALNRL
Trigger: TAGTCTGTTCAAAGCAAGTCATTGATGGTTCTTCGA...CCTAAAGAACATCCTGATTCCCCCAGTCTTCAAGCACATGAATTCAGAATGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR TCA 90 bp GCATTGCAATGTGCTTTCCTTGAATCACCAACTTTTTCTGTTTTCCTCTTCATCGCAATGTGCTTTCCTTaGATCACCAACTTTTTCTGT +
Preference number: 4 (lower is better)
Translates to: ALQCAFLESPTFSVFLFIAMCFP*ITNFFC
Trigger: ACAGAAAAAGTTGGTGATTCAAGGAAAGCACATTGC...GATGAAGAGGAAAACAGAAAAAGTTGGTGATTCAAGGAAAGCACATTGCAATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR CCA 90 bp TTACTTATAAAAATGCCGCCACAGACTTTCACTATGTTCTCTTCACTGTCAAATCATGTGCTTGAAGACTaGGGGAATCAGGATGTTCTT +
Preference number: 4 (lower is better)
Translates to: LLIKMPPQTFTMFSSLSNHVLED*GNQDVL
Trigger: AAGAACATCCTGATTCCCCCAGTCTTCAAGCACATG...ATTTGACAGTGAAGAGAACATAGTGAAAGTCTGTGGCGGCATTTTTATAAGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR TCA 90 bp GTTAGTCATTCTGACATATCCACTGCATCAAACAATGCTATCATGTCAAGAAAGTCATGGATTCATGGATaGCTCAAATCACAGAATGCT +
Preference number: 4 (lower is better)
Translates to: VSHSDISTASNNAIMSRKSWIHG*LKSQNA
Trigger: AGCATTCTGTGATTTGAGTCATCCATGAATCCATGA...CTTTCTTGACATGATAGCATTGTTTGATGCAGTGGATATGTCAGAATGACTAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR CCA 90 bp ATGTCAAGAAAGCAGACTCACATGAACCTTGTATATGTTCTGGATTTACTAGGACCTCAGATGCTAACATaGTTTTCAAAGAGTCACATT +
Preference number: 4 (lower is better)
Translates to: MSRKQTHMNLVYVLDLLGPQMLT*FSKSHI
Trigger: AATGTGACTCTTTGAAAACCATGTTAGCATCTGAGG...TCCTAGTAAATCCAGAACATATACAAGGTTCATGTGAGTCTGCTTTCTTGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR CCA 90 bp ATGTCAAGAAAGCAGACTCACATGAACCTTGTATATGTTCTGGATTTACTAGGAAAAAAGTCACTCCTTTaGAACAAACCACTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: MSRKQTHMNLVYVLDLLGKKSLL*NKPLLQ
Trigger: TTGAAGGAGTGGTTTGTTCCAAAGGAGTGACTTTTT...TCCTAGTAAATCCAGAACATATACAAGGTTCATGTGAGTCTGCTTTCTTGACAT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR CCA 90 bp ACAGCATTCAGATATAGACGGGATACTTGTGTTAGTCAGTTCCTTTATAACAGGCTAGGATGGTATCTATaGTATGAAATGAATGAAGCT +
Preference number: 4 (lower is better)
Translates to: TAFRYRRDTCVSQFLYNRLGWYL*YEMNEA
Trigger: AGCTTCATTCATTTCATACCATAGATACCATCCTAG...CCTGTTATAAAGGAACTGACTAACACAAGTATCCCGTCTATATCTGAATGCTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR TCA 90 bp TTACTTATAAAAATGCCGCCACAGACTTTCACTATGTTCTCTTCACTGTCAAATTTTACAAATGTGACTTaGCTTGGGGATCTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: LLIKMPPQTFTMFSSLSNFTNVT*LGDLLD
Trigger: ATCAAGAAGATCCCCAAGTCAAGTCACATTTGTAAA...ATTTGACAGTGAAGAGAACATAGTGAAAGTCTGTGGCGGCATTTTTATAAGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS GCA 90 bp GGACAGCATCTTTGTAGGAATCGGCGCCCGACAAACCATATGCGCTaGCTTTGGCTCCTAGGCCAGCTCCCTTTAGCCGAACTTGAGCCT +
Preference number: 5 (lower is better)
Translates to: GQHLCRNRRPTNHMR*LWLLGQLPLAELEP
Trigger: AGGCTCAAGTTCGGCTAAAGGGAGCTGGCCTAGGAGCCAAAGGCAGCGCATATGGTTTGTCGGGCGCCGATTCCTACAAAGATGCTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347869.8
ENST00000464087.6
ENST00000464988.1
CDS CCA 90 bp CATCTTTGTAGGAATCGGCGCCCGACAAACCATATGCGCTGCCTTTaGCTCCTAGGCCAGCTCCCTTTAGCCGAACTTGAGCCTCAATGG +
Preference number: 5 (lower is better)
Translates to: HLCRNRRPTNHMRCL*LLGQLPLAELEPQW
Trigger: CCATTGAGGCTCAAGTTCGGCTAAAGGGAGCTGGCCTAGGAGCCAAAGGCAGCGCATATGGTTTGTCGGGCGCCGATTCCTACAAAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347869.8
ENST00000464087.6
ENST00000464988.1
CDS CCA 90 bp CACATACACAGTGCCGGCATCAAACTGCTTCTTGCGCTTGGGCTCTaGAGGTTCTGGAATGCCGTACTTCTCCCGTCTTTCTGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: HIHSAGIKLLLALGL*RFWNAVLLPSFCSS
Trigger: CGAGCTGCAGAAAGACGGGAGAAGTACGGCATTCCAGAACCTCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGCCGGCACTGTGTATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000475590.5
CDS GCA 90 bp GGGCCCCAGCTTACGAACTGGAAAATGTGCACATCACATACACAGTaGCGGCATCAAACTGCTTCTTGCGCTTGGGCTCTGGAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: GPQLTNWKMCTSHTQ*RHQTASCAWALEVL
Trigger: CAGAACCTCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGCCGGCACTGTGTATGTGATGTGCACATTTTCCAGTTCGTAAGCTGGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000475590.5
CDS CCA 90 bp GTAATTCACAGTGCCGGCATCAAACTGCTTCTTGCGCTTGGGCTCTaGAGGTTCTGGAATGCCGTACTTCTCCCGTCTTTCTGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: VIHSAGIKLLLALGL*RFWNAVLLPSFCSS
Trigger: CGAGCTGCAGAAAGACGGGAGAAGTACGGCATTCCAGAACCTCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGCCGGCACTGTGAATTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347869.8
ENST00000464087.6
CDS-3UTR CAA 90 bp GGCTCAGACATGCTTGACCCACCTACCCACCCAAGAATAAAGAGACACAGGACAGGGAGCCGTAATGCCTaGACACTTTCGTCCCAAGCC +
Preference number: 5 (lower is better)
Translates to: GSDMLDPPTHPRIKRHRTGSRNA*TLSSQA
Trigger: GGCTTGGGACGAAAGTGTCAAGGCATTACGGCTCCC...TGTCCTGTGTCTCTTTATTCTTGGGTGGGTAGGTGGGTCAAGCATGTCTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp ACTTCTTTAAGGTGGGAGGGAGAACCCTGCAGAATGAAGTGGTTCACCCTAAGACCATATGCGCTGCCTTaGGCTCCTAGGCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: TSLRWEGEPCRMKWFTLRPYALP*APRPAP
Trigger: GGGAGCTGGCCTAGGAGCCAAAGGCAGCGCATATGG...TCTTAGGGTGAACCACTTCATTCTGCAGGGTTCTCCCTCCCACCTTAAAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS TCA 90 bp AAACGGAGTCAGGGAGTGCTGAGAAAGCTGTCAAACACTAAACGCTaGCTTGCACCAGGCCGTGTCTCCAGCGGAGACAGAAGTCCTAAC +
Preference number: 5 (lower is better)
Translates to: KRSQGVLRKLSNTKR*LAPGRVSSGDRSPN
Trigger: GTTAGGACTTCTGTCTCCGCTGGAGACACGGCCTGGTGCAAGTCAGCGTTTAGTGTTTGACAGCTTTCTCAGCACTCCCTGACTCCGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462025.1
ENST00000464087.6
ENST00000496179.5
CDS GCA 90 bp TCTGGCATTGCTGTGAGAGAGTCTCGGCAGTGTGCTTCTGCCTTGTaGACCCTTATGATGAAGGGACAATGTGAGGCTCACAAGGCACAC +
Preference number: 5 (lower is better)
Translates to: SGIAVRESRQCASAL*TLMMKGQCEAHKAH
Trigger: GTGTGCCTTGTGAGCCTCACATTGTCCCTTCATCATAAGGGTGCACAAGGCAGAAGCACACTGCCGAGACTCTCTCACAGCAATGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479275.1
CDS CCA 90 bp CTCTCTCCCTTAGCTCCAAGGCTTCCAGCTCCTGCTCGCTCAGCCTaGATCGTCGATAGATGTCCATGTTTTGCTTGTGAAGGTCTGAGA +
Preference number: 5 (lower is better)
Translates to: LSPLAPRLPAPARSA*IVDRCPCFACEGLR
Trigger: TCTCAGACCTTCACAAGCAAAACATGGACATCTATCGACGATCCAGGCTGAGCGAGCAGGAGCTGGAAGCCTTGGAGCTAAGGGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000347869.8
ENST00000464087.6
ENST00000464988.1
ENST00000475590.5
ENST00000479275.1
ENST00000492430.1
CDS CCA 90 bp GTTGCTCGTAATTCACAGTGCCGGCATCAAACTGCTTCTTGCGCTTaGGCTCTGGAGGTTCTGGAATGCCGTACTTCTCCCGTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: VARNSQCRHQTASCA*ALEVLECRTSPVFL
Trigger: CAGAAAGACGGGAGAAGTACGGCATTCCAGAACCTCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGCCGGCACTGTGAATTACGAGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347869.8
ENST00000464087.6
CDS CCA 90 bp TGCACATCACATACACAGTGCCGGCATCAAACTGCTTCTTGCGCTTaGGCTCTGGAGGTTCTGGAATGCCGTACTTCTCCCGTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: CTSHTQCRHQTASCA*ALEVLECRTSPVFL
Trigger: CAGAAAGACGGGAGAAGTACGGCATTCCAGAACCTCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGCCGGCACTGTGTATGTGATGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000475590.5
CDS-3UTR CAA 90 bp TTAAAGAGACAGGCGGTAACAGCGAATTCGGGAGATGGACCACTTCTTGTGCTCCTGGCTCAGACATGCTaGACCCACCTACCCACCCAA +
Preference number: 5 (lower is better)
Translates to: LKRQAVTANSGDGPLLVLLAQTC*THLPTQ
Trigger: TTGGGTGGGTAGGTGGGTCAAGCATGTCTGAGCCAG...GAGCACAAGAAGTGGTCCATCTCCCGAATTCGCTGTTACCGCCTGTCTCTTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS CCA 90 bp CCAGGGCAGAGCACACTTCGGAAAAATCAGTGCTCTGGAATTAAATaGACAACATACGGGGAGGACCAACCACCGCCACCTATACTCTGC +
Preference number: 5 (lower is better)
Translates to: PGQSTLRKNQCSGIK*TTYGEDQPPPPILC
Trigger: GCAGAGTATAGGTGGCGGTGGTTGGTCCTCCCCGTATGTTGTCCATTTAATTCCAGAGCACTGATTTTTCCGAAGTGTGCTCTGCCCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462025.1
ENST00000464087.6
ENST00000496179.5
CDS-3UTR CAA 90 bp CATGCCCTTAAAGAGACAGGCGGTAACAGCGAATTCGGGAGATGGACCACTTCTGCTGAGAAGCATCCATaGCAGAGGACAGCTGCACAA +
Preference number: 5 (lower is better)
Translates to: HALKETGGNSEFGRWTTSAEKHP*QRTAAQ
Trigger: TTGTGCAGCTGTCCTCTGCAATGGATGCTTCTCAGC...AGAAGTGGTCCATCTCCCGAATTCGCTGTTACCGCCTGTCTCTTTAAGGGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS TCA 90 bp AAGAGAATGGGATGCGGAGTAAAGGTAAACGGAGTCAGGGAGTGCTaGGAAAGCTGTCAAACACTAAACGCTGACTTGCACCAGGCCGTG +
Preference number: 5 (lower is better)
Translates to: KRMGCGVKVNGVREC*ESCQTLNADLHQAV
Trigger: CACGGCCTGGTGCAAGTCAGCGTTTAGTGTTTGACAGCTTTCTCAGCACTCCCTGACTCCGTTTACCTTTACTCCGCATCCCATTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462025.1
ENST00000464087.6
ENST00000496179.5
CDS TCA 90 bp AGTAATGAATCACATTTTGTCAACTGCGTGGAGCAGTCAGGTCCTTaGGTGCTAGGCCTGACAGCCTCCTGGTACCAACCTTCTTGGAGC +
Preference number: 5 (lower is better)
Translates to: SNESHFVNCVEQSGP*VLGLTASWYQPSWS
Trigger: GCTCCAAGAAGGTTGGTACCAGGAGGCTGTCAGGCCTAGCACTCAAGGACCTGACTGCTCCACGCAGTTGACAAAATGTGATTCATTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479275.1
CDS CCA 90 bp TGTGGTCAATGCCATCTTTGGTGGGTTGCTCGTAATTCCTGCCAGTaGCAAACACACAGTTACTTAAAACAGCCAGGGCCCCAGCTTACG +
Preference number: 5 (lower is better)
Translates to: CGQCHLWWVARNSCQ*QTHSYLKQPGPQLT
Trigger: CGTAAGCTGGGGCCCTGGCTGTTTTAAGTAACTGTGTGTTTGCCACTGGCAGGAATTACGAGCAACCCACCAAAGATGGCATTGACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000475590.5
CDS-3UTR CAA 90 bp AGACTGCATGTCTGGCCAGGAGAGAAAAAGCTGAAGGGCCATCCACTCACTGTGCCAGCTGGTAGCATCTaGCAAGTGATAAAACTCCAC +
Preference number: 5 (lower is better)
Translates to: RLHVWPGEKKLKGHPLTVPAGSI*QVIKLH
Trigger: GTGGAGTTTTATCACTTGCAAGATGCTACCAGCTGG...CACAGTGAGTGGATGGCCCTTCAGCTTTTTCTCTCCTGGCCAGACATGCAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR CAA 90 bp ACAAGGCATGCCCTTAAAGAGACAGGCGGTAACAGCGAATTCGGGAGATGGACCTTCTGCTGGGTCTGTTaGTCTTTTATGAGGCGGATG +
Preference number: 5 (lower is better)
Translates to: TRHALKETGGNSEFGRWTFCWVC*SFMRRM
Trigger: CATCCGCCTCATAAAAGACAAACAGACCCAGCAGAA...GGTCCATCTCCCGAATTCGCTGTTACCGCCTGTCTCTTTAAGGGCATGCCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp GCTGTCATGATGGAATCCACCACAGTGTGCGGAGCTATGTTCCGAAGAATGATCGCTGAGAAGCATCCATaGCAGAGGACAGCTGCACAA +
Preference number: 5 (lower is better)
Translates to: AVMMESTTVCGAMFRRMIAEKHP*QRTAAQ
Trigger: TTGTGCAGCTGTCCTCTGCAATGGATGCTTCTCAGC...GATCATTCTTCGGAACATAGCTCCGCACACTGTGGTGGATTCCATCATGACAGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR CAA 90 bp CCGACTCTGTGGTTCCAGGAGGCACTTCCTGTTCAGAGTCAAACTTGTCTGCTCGCCATCTTGACCTGGTaGCAGATAACTGTAGTCAAC +
Preference number: 5 (lower is better)
Translates to: PTLWFQEALPVQSQTCLLAILTW*QITVVN
Trigger: GTTGACTACAGTTATCTGCAACCAGGTCAAGATGGC...GAGCAGACAAGTTTGACTCTGAACAGGAAGTGCCTCCTGGAACCACAGAGTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR CAA 90 bp GGTAACAGCGAATTCGGGAGATGGACCACTTCTTGTGCTCCTTGTCATCTCTCTGCCATCTTTGGTGGGTaGCTCGTAATTCACAGTGCC +
Preference number: 5 (lower is better)
Translates to: GNSEFGRWTTSCAPCHLSAIFGG*LVIHSA
Trigger: GGCACTGTGAATTACGAGCAACCCACCAAAGATGGC...AGAGAGATGACAAGGAGCACAAGAAGTGGTCCATCTCCCGAATTCGCTGTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS TCA 90 bp GCTCCTTGTCATCTCTCTCTCTCTCTCTCTCTCACTCCATCTCAGTaGACCGGGCAAACATGGCTTTCCGGACAGCATCTTTGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: APCHLSLSLSLTPSQ*TGQTWLSGQHLCRN
Trigger: ATTCCTACAAAGATGCTGTCCGGAAAGCCATGTTTGCCCGGTTCACTGAGATGGAGTGAGAGAGAGAGAGAGAGAGAGATGACAAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347869.8
ENST00000464087.6
ENST00000464988.1
CDS GCA 90 bp AGGGGATTCTCCTCATCTCCATTTCGCACCAATTCTGGGATGAGCTaGTGCCTTTCAGCTAAGGCTCCCTTCTTCTCAAAGAGAGCAAAG +
Preference number: 5 (lower is better)
Translates to: RGFSSSPFRTNSGMS*CLSAKAPFFSKRAK
Trigger: CTTTGCTCTCTTTGAGAAGAAGGGAGCCTTAGCTGAAAGGCAGCAGCTCATCCCAGAATTGGTGCGAAATGGAGATGAGGAGAATCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347869.8
ENST00000464087.6
ENST00000475128.5
ENST00000475590.5
ENST00000492430.1
CDS GCA 90 bp TGTTACTGTGGTCAATGCCATCTTTGGTGGGTTGCTCGTAATTCCTaGCAGTGGCAAACACACAGTTACTTAAAACAGCCAGGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: CYCGQCHLWWVARNS*QWQTHSYLKQPGPQ
Trigger: CTGGGGCCCTGGCTGTTTTAAGTAACTGTGTGTTTGCCACTGGCAGGAATTACGAGCAACCCACCAAAGATGGCATTGACCACAGTAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000475590.5
CDS GCA 90 bp AACGCAGAATGCAAACTTTGGGCCACAGTGGGACTGACACTACCCTaGACTAAAGAAAGGCAGATGCAGAATGCAAACCAGGTGAGCAGA +
Preference number: 5 (lower is better)
Translates to: NAECKLWATVGLTLP*TKERQMQNANQVSR
Trigger: TCTGCTCACCTGGTTTGCATTCTGCATCTGCCTTTCTTTAGTGCAGGGTAGTGTCAGTCCCACTGTGGCCCAAAGTTTGCATTCTGCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471995.5
CDS CCA 90 bp AAGCAGCAACCAGACCCCTCTGGAGACAAAAGGAGGACAGGTCACTaGAAATGTACAATAGGAAGATGGCGGTGGCTATGTACCTGGATA +
Preference number: 5 (lower is better)
Translates to: KQQPDPSGDKRRTGH*KCTIGRWRWLCTWI
Trigger: TATCCAGGTACATAGCCACCGCCATCTTCCTATTGTACATTTCCAGTGACCTGTCCTCCTTTTGTCTCCAGAGGGGTCTGGTTGCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000479275.1
CDS CCA 90 bp GCCATGACAACAGCTCATCATTGGGCCCATCCACATAGAATCCATTaGATACCAGGCAACCACACACAGGGTGTAAACACTAGCACAGAG +
Preference number: 5 (lower is better)
Translates to: AMTTAHHWAHPHRIH*IPGNHTQGVNTSTE
Trigger: CTCTGTGCTAGTGTTTACACCCTGTGTGTGGTTGCCTGGTATCCAATGGATTCTATGTGGATGGGCCCAATGATGAGCTGTTGTCATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475128.5
CDS CCA 90 bp GCGTGTCATGGAGTTCAGACATCTGCCATGACAACAGCTCATCATTaGGCCCATCCACATAGAATCCATTGGATACCAGGCAACCACACA +
Preference number: 5 (lower is better)
Translates to: ACHGVQTSAMTTAHH*AHPHRIHWIPGNHT
Trigger: TGTGTGGTTGCCTGGTATCCAATGGATTCTATGTGGATGGGCCCAATGATGAGCTGTTGTCATGGCAGATGTCTGAACTCCATGACACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475128.5
CDS-3UTR CAA 90 bp AGACAGTGCTGTCATGATGGAATCCACCACAGTGTGCGGAGCTATGTTCCGAAGTTCTGCTGGGTCTGTTaGTCTTTTATGAGGCGGATG +
Preference number: 5 (lower is better)
Translates to: RQCCHDGIHHSVRSYVPKFCWVC*SFMRRM
Trigger: CATCCGCCTCATAAAAGACAAACAGACCCAGCAGAA...CTTCGGAACATAGCTCCGCACACTGTGGTGGATTCCATCATGACAGCACTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR CAA 90 bp ACAAGGCATGCCCTTAAAGAGACAGGCGGTAACAGCGAATTCGGGAGATGGACCAGGTGGATTGGAGGTTaGATTATACAGCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: TRHALKETGGNSEFGRWTRWIGG*IIQLRT
Trigger: AGTCCTCAGCTGTATAATCAAACCTCCAATCCACCT...GGTCCATCTCCCGAATTCGCTGTTACCGCCTGTCTCTTTAAGGGCATGCCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp ACTTCTTTAAGGTGGGAGGGAGAACCCTGCAGAATGAAGTGGTTCACCCTAAGACAGCGTTCCATGTCTTaGGCAATCTGCTGGGCTGTT +
Preference number: 5 (lower is better)
Translates to: TSLRWEGEPCRMKWFTLRQRSMS*AICWAV
Trigger: AACAGCCCAGCAGATTGCCAAAGACATGGAACGCTG...TCTTAGGGTGAACCACTTCATTCTGCAGGGTTCTCCCTCCCACCTTAAAGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp ACATTACACTATGTACACTGGAGTATAAACAATCCACTGTCCTCTCCGGTCTGTCTGACTAGGGCATCTTaGTTCGGGAACTGGCGCCGG +
Preference number: 5 (lower is better)
Translates to: TLHYVHWSINNPLSSPVCLTRAS*FGNWRR
Trigger: CCGGCGCCAGTTCCCGAACAAAGATGCCCTAGTCAG...ACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTGTACATAGTGTAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp CACCAGGCAACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTGCGTAAAGGAGCCAGATTaGGCAACTAGACTGAAAATC +
Preference number: 5 (lower is better)
Translates to: HQATHIRGTSLRWEGEPCVKEPD*ATRLKI
Trigger: GATTTTCAGTCTAGTTGCCAAATCTGGCTCCTTTAC...GCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGTTGCCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS TCA 90 bp GTGACTTGGTTAACGCAGAATGCAAACTTTGGGCCACAGTGGGACTaGCACTACCCTGCACTAAAGAAAGGCAGATGCAGAATGCAAACC +
Preference number: 5 (lower is better)
Translates to: VTWLTQNANFGPQWD*HYPALKKGRCRMQT
Trigger: GGTTTGCATTCTGCATCTGCCTTTCTTTAGTGCAGGGTAGTGTCAGTCCCACTGTGGCCCAAAGTTTGCATTCTGCGTTAACCAAGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471995.5
CDS CCA 90 bp CCTGCAGCATCTTGTTGCCAATGTTACTGTGGTCAATGCCATCTTTaGTGGGTTGCTCGTAATTCCTGCCAGTGGCAAACACACAGTTAC +
Preference number: 5 (lower is better)
Translates to: PAASCCQCYCGQCHL*WVARNSCQWQTHSY
Trigger: GTAACTGTGTGTTTGCCACTGGCAGGAATTACGAGCAACCCACCAAAGATGGCATTGACCACAGTAACATTGGCAACAAGATGCTGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000475590.5
CDS CCA 90 bp CTCTGTTCCACAGACTATTTACATAAACCAGGCAGCCAGAACAGGTaGGCGTGTCATGGAGTTCAGACATCTGCCATGACAACAGCTCAT +
Preference number: 5 (lower is better)
Translates to: LCSTDYLHKPGSQNR*ACHGVQTSAMTTAH
Trigger: ATGAGCTGTTGTCATGGCAGATGTCTGAACTCCATGACACGCCCACCTGTTCTGGCTGCCTGGTTTATGTAAATAGTCTGTGGAACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475128.5
CDS-3UTR CAA 90 bp GGTAACAGCGAATTCGGGAGATGGACCACTTCTTGTGCTCCTTGTCATCTCTCTCCAGCTGGTAGCATCTaGCAAGTGATAAAACTCCAC +
Preference number: 5 (lower is better)
Translates to: GNSEFGRWTTSCAPCHLSPAGSI*QVIKLH
Trigger: GTGGAGTTTTATCACTTGCAAGATGCTACCAGCTGG...AGAGAGATGACAAGGAGCACAAGAAGTGGTCCATCTCCCGAATTCGCTGTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp ACCCACATAAGGGGAACTTCTTTAAGGTGGGAGGGAGAACCCTGCAGAATGAAGTTGGGCATAGCCATCTaGACCTGGTTGCAGATAACT +
Preference number: 5 (lower is better)
Translates to: THIRGTSLRWEGEPCRMKLGIAI*TWLQIT
Trigger: AGTTATCTGCAACCAGGTCAAGATGGCTATGCCCAA...CTTCATTCTGCAGGGTTCTCCCTCCCACCTTAAAGAAGTTCCCCTTATGTGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp ACTTCTTTAAGGTGGGAGGGAGAACCCTGCAGAATGAAGTGGTTCACCCTAAGAGCCTGCAGCATCTTGTaGCCAATGTTACTGTGGTCA +
Preference number: 5 (lower is better)
Translates to: TSLRWEGEPCRMKWFTLRACSIL*PMLLWS
Trigger: TGACCACAGTAACATTGGCAACAAGATGCTGCAGGC...TCTTAGGGTGAACCACTTCATTCTGCAGGGTTCTCCCTCCCACCTTAAAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS CCA 90 bp AGTTTTGTATATAGGACAACAGGATTACCGGAGAGCCAGGTGGATTaGAGGTTTGATTATACAGCTGAGGACTCTGGGACACTACAGCCG +
Preference number: 5 (lower is better)
Translates to: SFVYRTTGLPESQVD*RFDYTAEDSGTLQP
Trigger: CGGCTGTAGTGTCCCAGAGTCCTCAGCTGTATAATCAAACCTCCAATCCACCTGGCTCTCCGGTAATCCTGTTGTCCTATATACAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494360.5
CDS CCA 90 bp CCACGAGTTTTGTATATAGGACAACAGGATTACCGGAGAGCCAGGTaGATTGGAGGTTTGATTATACAGCTGAGGACTCTGGGACACTAC +
Preference number: 5 (lower is better)
Translates to: PRVLYIGQQDYRRAR*IGGLIIQLRTLGHY
Trigger: GTAGTGTCCCAGAGTCCTCAGCTGTATAATCAAACCTCCAATCCACCTGGCTCTCCGGTAATCCTGTTGTCCTATATACAAAACTCGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494360.5
CDS-3UTR CAA 90 bp GCCTCTGTTCTGCTGGGTCTGTTTGTCTTTTATGAGGCGGATGTTATTGACAGCTTGGGCATAGCCATCTaGACCTGGTTGCAGATAACT +
Preference number: 5 (lower is better)
Translates to: ASVLLGLFVFYEADVIDSLGIAI*TWLQIT
Trigger: AGTTATCTGCAACCAGGTCAAGATGGCTATGCCCAA...GCTGTCAATAACATCCGCCTCATAAAAGACAAACAGACCCAGCAGAACAGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR CAA 90 bp TTCGGGAGATGGACCACTTCTTGTGCTCCTTGTCATCTCTCTCTCTCTCTCTCTTCAGGTACTGCATATTaGGTACCAGGAACTACACCA +
Preference number: 5 (lower is better)
Translates to: FGRWTTSCAPCHLSLSLSSGTAY*VPGTTP
Trigger: TGGTGTAGTTCCTGGTACCAAATATGCAGTACCTGA...AGAGAGAGAGAGAGAGAGATGACAAGGAGCACAAGAAGTGGTCCATCTCCCGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp AAAGACATCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACAGGCAACCAGACCCCTTTaGAGGGGATTCTCCTCATCT +
Preference number: 5 (lower is better)
Translates to: KDITTNDRGGFGVTYHLQATRPL*RGFSSS
Trigger: AGATGAGGAGAATCCCCTCAAAAGGGGTCTGGTTGC...CTGTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp CAGGACACCCATTTCTCAAGGTATTTCTTTTGTAAAGGAGCCAGATTTGGCAACAACTGCTTCTTGCGCTaGGGCTCTGGAGGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: QDTHFSRYFFCKGARFGNNCFLR*GSGGSG
Trigger: TCCAGAACCTCCAGAGCCCAAGCGCAAGAAGCAGTT...GTTGCCAAATCTGGCTCCTTTACAAAAGAAATACCTTGAGAAATGGGTGTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp TTCACCCTAAGATCTATTAACAGCACAAGGCATGCCCTTAAAGAGACAGGCGGTGAGATGGACCACTTCTaGTGCTCCTTGTCATCTCTC +
Preference number: 5 (lower is better)
Translates to: FTLRSINSTRHALKETGGEMDHF*CSLSSL
Trigger: GAGAGATGACAAGGAGCACAAGAAGTGGTCCATCTC...ACCGCCTGTCTCTTTAAGGGCATGCCTTGTGCTGTTAATAGATCTTAGGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp CTGCGATATCTAAAGGCAAGACTGCATGTCTGGCCAGGAGAGAAAAAGCTGAAGGACTTGGGGATCTTCTaGATACTTTGCCATGGCAAG +
Preference number: 5 (lower is better)
Translates to: LRYLKARLHVWPGEKKLKDLGIF*ILCHGK
Trigger: CTTGCCATGGCAAAGTATCAAGAAGATCCCCAAGTC...CTTCAGCTTTTTCTCTCCTGGCCAGACATGCAGTCTTGCCTTTAGATATCGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS GCA 90 bp CATTCCTGCTATTACCTTCTTCTCAAAGAGAGCAAAGCCAGCGTCTaGTGCAGCAGATTCTCTCCTTTCTTCTTCCCTCAAGGAATTGAC +
Preference number: 5 (lower is better)
Translates to: HSCYYLLLKESKASV*CSRFSPFFFPQGID
Trigger: GTCAATTCCTTGAGGGAAGAAGAAAGGAGAGAATCTGCTGCAGCAGACGCTGGCTTTGCTCTCTTTGAGAAGAAGGTAATAGCAGGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493993.1
CDS CCA 90 bp GCAGCATCTTGTTGCCAATGTTACTGTGGTCAATGCCATCTTTGGTaGGTTGCTCGTAATTCCTGCCAGTGGCAAACACACAGTTACTTA +
Preference number: 5 (lower is better)
Translates to: AASCCQCYCGQCHLW*VARNSCQWQTHSYL
Trigger: TAAGTAACTGTGTGTTTGCCACTGGCAGGAATTACGAGCAACCCACCAAAGATGGCATTGACCACAGTAACATTGGCAACAAGATGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000475590.5
CDS-3UTR CAA 90 bp GCACTTCCTGTTCAGAGTCAAACTTGTCTGCTCCACATCGGAAGCATTTTAGTCTGTTCAGAGTCAAACTaGTCTGCTCCACATCGGAAG +
Preference number: 5 (lower is better)
Translates to: ALPVQSQTCLLHIGSILVCSESN*SAPHRK
Trigger: CTTCCGATGTGGAGCAGACAAGTTTGACTCTGAACA...GACTAAAATGCTTCCGATGTGGAGCAGACAAGTTTGACTCTGAACAGGAAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR CAA 90 bp GAAAAGACATCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACATCTGCTGGGCTGTTTaGCTCTTGGGTTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: EKTSQQMTEVALVSHTTYICWAV*LLGFSF
Trigger: GAAGGAGAAACCCAAGAGCAAAACAGCCCAGCAGAT...GTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp CCCATTTCTCAAGGTATTTCTTTTGTAAAGGAGCCAGATTTGGCAACTAGACTGGCATCAAACTGCTTCTaGCGCTTGGGCTCTGGAGGT +
Preference number: 5 (lower is better)
Translates to: PISQGISFVKEPDLATRLASNCF*RLGSGG
Trigger: ACCTCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGC...CAGTCTAGTTGCCAAATCTGGCTCCTTTACAAAAGAAATACCTTGAGAAATGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp TCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACAGCATCTCACACTTCTTGTGCTCCTaGTCATCTCTCTCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: SQQMTEVALVSHTTYSISHFLCS*SSLSLS
Trigger: AGAGAGAGAGAGAGATGACAAGGAGCACAAGAAGTG...TGAGATGCTGTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp CCAAGAAAAGACATCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACATGACAGAGGTGGCTTaGGTGTCACATACCACCTAC +
Preference number: 5 (lower is better)
Translates to: PRKDITTNDRGGFGVTYHMTEVA*VSHTTY
Trigger: GTAGGTGGTATGTGACACCAAAGCCACCTCTGTCAT...GTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTTTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp CTGCGATATCTAAAGGCAAGACTGCATGTCTGGCCAGGAGAGAAAAAGCTGAAGAAGGGTGGGGGTGGTTaGACACTATCAAACAGATTT +
Preference number: 5 (lower is better)
Translates to: LRYLKARLHVWPGEKKLKKGGGG*TLSNRF
Trigger: AAATCTGTTTGATAGTGTCAAACCACCCCCACCCTT...CTTCAGCTTTTTCTCTCCTGGCCAGACATGCAGTCTTGCCTTTAGATATCGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS CCA 90 bp CATCACTCCATCTCATCTGCTCTCACAGAAAACAAAGCCCCGACATaGAATCTATGTGCAGAAACTGCTCCAATACCCATCAACAGTGAT +
Preference number: 5 (lower is better)
Translates to: HHSISSALTENKAPT*NLCAETAPIPINSD
Trigger: ATCACTGTTGATGGGTATTGGAGCAGTTTCTGCACATAGATTCCATGTCGGGGCTTTGTTTTCTGTGAGAGCAGATGAGATGGAGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479275.1
CDS-3UTR CAA 90 bp AAAGACATCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACAGTGTTCAGAGTCAAACTaGTCTGCTCCACATCGGAAG +
Preference number: 5 (lower is better)
Translates to: KDITTNDRGGFGVTYHLQCSESN*SAPHRK
Trigger: CTTCCGATGTGGAGCAGACAAGTTTGACTCTGAACA...CTGTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp GAAAAGACATCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACGCCATCTTGACCTGGTaGCAGATAACTGTAGTCAAC +
Preference number: 5 (lower is better)
Translates to: EKTSQQMTEVALVSHTTYAILTW*QITVVN
Trigger: GTTGACTACAGTTATCTGCAACCAGGTCAAGATGGC...GTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp TTCGGGAGATGGACCACTTCTTGTGCTCCTTGTCATCTCTCTCTCTCTCTCTCTCATAATAGAGCCCTGTaGTCGGATCATAGTAATATC +
Preference number: 5 (lower is better)
Translates to: FGRWTTSCAPCHLSLSLSHNRAL*SDHSNI
Trigger: GATATTACTATGATCCGACAACAGGGCTCTATTATG...AGAGAGAGAGAGAGAGAGATGACAAGGAGCACAAGAAGTGGTCCATCTCCCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS TCA 90 bp CAGAGGACAAGCCATGAGACTCAAGTTTTAGGTAAGTTCCCATCATaGCATACTGGCCATTCCTGCTATTACCTTCTTCTCAAAGAGAGC +
Preference number: 5 (lower is better)
Translates to: QRTSHETQVLGKFPS*HTGHSCYYLLLKES
Trigger: GCTCTCTTTGAGAAGAAGGTAATAGCAGGAATGGCCAGTATGTCATGATGGGAACTTACCTAAAACTTGAGTCTCATGGCTTGTCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493993.1
CDS-3UTR CAA 90 bp GCTGTCATGATGGAATCCACCACAGTGTGCGGAGCTATGTTCCGAAGAATGATCGATTGCTATAATGCATaGCAATGTGCTTTCCTTGAA +
Preference number: 5 (lower is better)
Translates to: AVMMESTTVCGAMFRRMIDCYNA*QCAFLE
Trigger: TTCAAGGAAAGCACATTGCAATGCATTATAGCAATC...GATCATTCTTCGGAACATAGCTCCGCACACTGTGGTGGATTCCATCATGACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR CAA 90 bp TGCTGTCATGATGGAATCCACCACAGTGTGCGGAGCTATGTTCCGAAGAATGATCAATCCTCCAGCTTGTaGTTGATAAAACTGCTGATA +
Preference number: 5 (lower is better)
Translates to: CCHDGIHHSVRSYVPKNDQSSSL*LIKLLI
Trigger: TATCAGCAGTTTTATCAACAACAAGCTGGAGGATTG...ATCATTCTTCGGAACATAGCTCCGCACACTGTGGTGGATTCCATCATGACAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR CAA 90 bp ATGTCAAGAAAGCAGACTCACATGAACCTTGTATATGTTCTGGATTTACTAGGACGCCTCCAGGAGGCTTaGTGGTCTTCAGGCAGAAAT +
Preference number: 5 (lower is better)
Translates to: MSRKQTHMNLVYVLDLLGRLQEA*WSSGRN
Trigger: ATTTCTGCCTGAAGACCACAAAGCCTCCTGGAGGCG...TCCTAGTAAATCCAGAACATATACAAGGTTCATGTGAGTCTGCTTTCTTGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR CAA 90 bp CTGCGATATCTAAAGGCAAGACTGCATGTCTGGCCAGGAGAGAAAAAGCTGAAGATACTGTTGAGCAATTaGGTTCTTGCAAATCCTGGA +
Preference number: 5 (lower is better)
Translates to: LRYLKARLHVWPGEKKLKILLSN*VLANPG
Trigger: TCCAGGATTTGCAAGAACCAAATTGCTCAACAGTAT...CTTCAGCTTTTTCTCTCCTGGCCAGACATGCAGTCTTGCCTTTAGATATCGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS CCA 90 bp AAAGTATGTTGTGGACTAGTGATATTTCCTGCCCAGAAAAGACCCTaGGCACACCTTGGTATAAGTAAAGGTGATGAACCACCTAGCAAA +
Preference number: 5 (lower is better)
Translates to: KVCCGLVIFPAQKRP*AHLGISKGDEPPSK
Trigger: TTTGCTAGGTGGTTCATCACCTTTACTTATACCAAGGTGTGCCCAGGGTCTTTTCTGGGCAGGAAATATCACTAGTCCACAACATACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000474470.1
ENST00000475128.5
CDS-3UTR CAA 90 bp GCCTCTGTTCTGCTGGGTCTGTTTGTCTTTTATGAGGCGGATGTTATTGACAGCAGTCTTTTCCTGAAATaGTTAAGGCAGCACTTGTTA +
Preference number: 5 (lower is better)
Translates to: ASVLLGLFVFYEADVIDSSLFLK*LRQHLL
Trigger: TAACAAGTGCTGCCTTAACAATTTCAGGAAAAGACT...GCTGTCAATAACATCCGCCTCATAAAAGACAAACAGACCCAGCAGAACAGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR CAA 90 bp CCAAGAAAAGACATCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACTTCCAATCCTCCAGCTaGTTGTTGATAAAACTGCTG +
Preference number: 5 (lower is better)
Translates to: PRKDITTNDRGGFGVTYHFQSSS*LLIKLL
Trigger: CAGCAGTTTTATCAACAACAAGCTGGAGGATTGGAA...GTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTTTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp CCTGTTCAGAGTCAAACTTGTCTGCTCCACATCGGAAGCATTTTAGTCTTTTCCTTCCAATCCTCCAGCTaGTTGTTGATAAAACTGCTG +
Preference number: 5 (lower is better)
Translates to: PVQSQTCLLHIGSILVFSFQSSS*LLIKLL
Trigger: CAGCAGTTTTATCAACAACAAGCTGGAGGATTGGAA...GGAAAAGACTAAAATGCTTCCGATGTGGAGCAGACAAGTTTGACTCTGAACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR CAA 90 bp TGTACACTGGAGTATAAACAATCCACTGTCCTCTCCGGTCTGTTCACAAGCCCTGGAATTATAGTAGTATaGCGAGTTGGGGTCATAATA +
Preference number: 5 (lower is better)
Translates to: CTLEYKQSTVLSGLFTSPGIIVV*RVGVII
Trigger: TATTATGACCCCAACTCGCAATACTACTATAATTCC...AGGGCTTGTGAACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp TGTACACTGGAGTATAAACAATCCACTGTCCTCTCCGGTCTGTTCACAAGCCCTATATACACAAGGCTTTaGCCAAGAAAAGACATCACA +
Preference number: 5 (lower is better)
Translates to: CTLEYKQSTVLSGLFTSPIYTRL*PRKDIT
Trigger: TGTGATGTCTTTTCTTGGCAAAAGCCTTGTGTATAT...AGGGCTTGTGAACAGACCGGAGAGGACAGTGGATTGTTTATACTCCAGTGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp TTTCATTCTGAATTCATGTGCTTGAAGACTGGGGGAATCAGGATGTTCTTTAGGTCTGAATTCATGTGCTaGAAGACTGGGGGAATCAGG +
Preference number: 5 (lower is better)
Translates to: FHSEFMCLKTGGIRMFFRSEFMC*KTGGIR
Trigger: CCTGATTCCCCCAGTCTTCAAGCACATGAATTCAGA...CCTAAAGAACATCCTGATTCCCCCAGTCTTCAAGCACATGAATTCAGAATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR CAA 90 bp AAAGACATCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACAGTTGTTAAGGCAGCACTaGTTACAAAGCCAATCTTCA +
Preference number: 5 (lower is better)
Translates to: KDITTNDRGGFGVTYHLQLLRQH*LQSQSS
Trigger: TGAAGATTGGCTTTGTAACAAGTGCTGCCTTAACAA...CTGTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp TTCACCCTAAGATCTATTAACAGCACAAGGCATGCCCTTAAAGAGACAGGCGGTAGTCTTTTCCTGAAATaGTTAAGGCAGCACTTGTTA +
Preference number: 5 (lower is better)
Translates to: FTLRSINSTRHALKETGGSLFLK*LRQHLL
Trigger: TAACAAGTGCTGCCTTAACAATTTCAGGAAAAGACT...ACCGCCTGTCTCTTTAAGGGCATGCCTTGTGCTGTTAATAGATCTTAGGGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp TTCACCCTAAGATCTATTAACAGCACAAGGCATGCCCTTAAAGAGACAGGCGGTTCAACCCCAATAGTTTaGCCATCAATTTTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: FTLRSINSTRHALKETGGSTPIV*PSIFKG
Trigger: TCCTTTGAAAATTGATGGCAAAACTATTGGGGTTGA...ACCGCCTGTCTCTTTAAGGGCATGCCTTGTGCTGTTAATAGATCTTAGGGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp GAAAAGACATCACAACAAATGACAGAGGTGGCTTTGGTGTCACATACCACCTACTCCTCCAGCTTGTTGTaGATAAAACTGCTGATAATC +
Preference number: 5 (lower is better)
Translates to: EKTSQQMTEVALVSHTTYSSSLL*IKLLII
Trigger: GATTATCAGCAGTTTTATCAACAACAAGCTGGAGGA...GTAGGTGGTATGTGACACCAAAGCCACCTCTGTCATTTGTTGTGATGTCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp TCCTGTTCAGAGTCAAACTTGTCTGCTCCACATCGGAAGCATTTTAGTCTTTTCTCCTCCAGCTTGTTGTaGATAAAACTGCTGATAATC +
Preference number: 5 (lower is better)
Translates to: SCSESNLSAPHRKHFSLFSSSLL*IKLLII
Trigger: GATTATCAGCAGTTTTATCAACAACAAGCTGGAGGA...GAAAAGACTAAAATGCTTCCGATGTGGAGCAGACAAGTTTGACTCTGAACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS-3UTR CAA 90 bp CAGGACACCCATTTCTCAAGGTATTTCTTTTGTAAAGGAGCCAGATTTGGCAACGATTGCTATAATGCATaGCAATGTGCTTTCCTTGAA +
Preference number: 5 (lower is better)
Translates to: QDTHFSRYFFCKGARFGNDCYNA*QCAFLE
Trigger: TTCAAGGAAAGCACATTGCAATGCATTATAGCAATC...GTTGCCAAATCTGGCTCCTTTACAAAAGAAATACCTTGAGAAATGGGTGTCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp CCCATTTCTCAAGGTATTTCTTTTGTAAAGGAGCCAGATTTGGCAACTAGACTGCAATCCTCCAGCTTGTaGTTGATAAAACTGCTGATA +
Preference number: 5 (lower is better)
Translates to: PISQGISFVKEPDLATRLQSSSL*LIKLLI
Trigger: TATCAGCAGTTTTATCAACAACAAGCTGGAGGATTG...CAGTCTAGTTGCCAAATCTGGCTCCTTTACAAAAGAAATACCTTGAGAAATGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS-3UTR CAA 90 bp GTTAGTCATTCTGACATATCCACTGCATCAAACAATGCTATCATGTCAAGAAAGGATCTTCTTGATACTTaGCCATGGCAAGGAACAAGC +
Preference number: 5 (lower is better)
Translates to: VSHSDISTASNNAIMSRKDLLDT*PWQGTS
Trigger: GCTTGTTCCTTGCCATGGCAAAGTATCAAGAAGATC...CTTTCTTGACATGATAGCATTGTTTGATGCAGTGGATATGTCAGAATGACTAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469838.5
CDS-3UTR CAA 90 bp GCATTGCAATGTGCTTTCCTTGAATCACCAACTTTTTCTGTTTTCCTCTTCATCTCAACCCCAATAGTTTaGCCATCAATTTTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: ALQCAFLESPTFSVFLFISTPIV*PSIFKG
Trigger: TCCTTTGAAAATTGATGGCAAAACTATTGGGGTTGA...GATGAAGAGGAAAACAGAAAAAGTTGGTGATTCAAGGAAAGCACATTGCAATGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395174.6
CDS CCA 72 bp CCAGAACCTCCAACAAGGTTCGGCGGCTACACAAAATaGCGCCTCCGCCGACGGCCGTCTCCTACCCACAGT +
Preference number: 6 (lower is better)
Translates to: PEPPTRFGGYTK*RLRRRPSPTHS
Trigger: ACTGTGGGTAGGAGACGGCCGTCGGCGGAGGCGCCATTTTGTGTAGCCGCCGAACCTTGTTGGAGGTTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000347869.8
ENST00000404526.6
ENST00000469838.5
CDS GCA 72 bp AGGAGGCAGGCCCGACTGCTGGTGGGAGCTAGACTCTaGAGCTGGCACGTAGGTCTCTTTTTCCCCATCCCA +
Preference number: 6 (lower is better)
Translates to: RRQARLLVGARL*SWHVGLFFPIP
Trigger: TGGGATGGGGAAAAAGAGACCTACGTGCCAGCTGCAGAGTCTAGCTCCCACCAGCAGTCGGGCCTGCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000347869.8
ENST00000464087.6
ENST00000474470.1
ENST00000475128.5
ENST00000493993.1
CDS CCA 72 bp GCTGAGGACTCTGGGACACTACAGCCGCTGAGGTGGTaGTCACTGCTGTGCCTGATGCAGATGATGCATCAG +
Preference number: 6 (lower is better)
Translates to: AEDSGTLQPLRW*SLLCLMQMMHQ
Trigger: CTGATGCATCATCTGCATCAGGCACAGCAGTGACCACCACCTCAGCGGCTGTAGTGTCCCAGAGTCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347869.8
ENST00000441812.6
ENST00000464087.6
ENST00000474818.5
ENST00000489437.1
ENST00000494360.5
CDS CCA 72 bp CAGGCCCGACTGCTGGTGGGAGCTAGACTCTGCAGCTaGCACGTAGGTCTCTTTTTCCCCATCCCAGTAAAG +
Preference number: 6 (lower is better)
Translates to: QARLLVGARLCS*HVGLFFPIPVK
Trigger: CTTTACTGGGATGGGGAAAAAGAGACCTACGTGCCAGCTGCAGAGTCTAGCTCCCACCAGCAGTCGGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000347869.8
ENST00000441812.6
ENST00000464087.6
ENST00000474470.1
ENST00000475128.5
ENST00000493993.1
CDS CCA 72 bp AGGAATCGGCGCCCGACAAACCATATGCGCTGCCTTTaGCTCCTAGGCCAGCTCCCTTTAGCCGAACTTGAG +
Preference number: 6 (lower is better)
Translates to: RNRRPTNHMRCL*LLGQLPLAELE
Trigger: CTCAAGTTCGGCTAAAGGGAGCTGGCCTAGGAGCCAAAGGCAGCGCATATGGTTTGTCGGGCGCCGATTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347869.8
ENST00000464087.6
ENST00000464988.1
CDS CCA 72 bp ACAGCTGAGGACTCTGGGACACTACAGCCGCTGAGGTaGTGGTCACTGCTGTGCCTGATGCAGATGATGCAT +
Preference number: 6 (lower is better)
Translates to: TAEDSGTLQPLR*WSLLCLMQMMH
Trigger: ATGCATCATCTGCATCAGGCACAGCAGTGACCACCACCTCAGCGGCTGTAGTGTCCCAGAGTCCTCAGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000347869.8
ENST00000441812.6
ENST00000464087.6
ENST00000474818.5
ENST00000489437.1
ENST00000494360.5
CDS CCA 72 bp AGTGCCGGCATCAAACTGCTTCTTGCGCTTGGGCTCTaGAGGTTCTGGAATGCCGTACTTCTCCCGTCTTTC +
Preference number: 6 (lower is better)
Translates to: SAGIKLLLALGL*RFWNAVLLPSF
Trigger: GAAAGACGGGAGAAGTACGGCATTCCAGAACCTCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGCCGGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347869.8
ENST00000461242.1
ENST00000464087.6
ENST00000464988.1
ENST00000475590.5
CDS CCA 72 bp CATACACAGTGCCGGCATCAAACTGCTTCTTGCGCTTaGGCTCTGGAGGTTCTGGAATGCCGTACTTCTCCC +
Preference number: 6 (lower is better)
Translates to: HTQCRHQTASCA*ALEVLECRTSP
Trigger: GGGAGAAGTACGGCATTCCAGAACCTCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGCCGGCACTGTGTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000475590.5
CDS TCA 72 bp TCACATTTTGTCAACTGCGTGGAGCAGTCAGGTCCTTaGGTGCTAGGCCTGACAGCCTCCTGGTACCAACCT +
Preference number: 6 (lower is better)
Translates to: SHFVNCVEQSGP*VLGLTASWYQP
Trigger: AGGTTGGTACCAGGAGGCTGTCAGGCCTAGCACTCAAGGACCTGACTGCTCCACGCAGTTGACAAAATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479275.1
CDS GCA 72 bp GCTCGTAATTCACAGTGCCGGCATCAAACTGCTTCTTaGGCTTGGGCTCTGGAGGTTCTGGAATGCCGTACT +
Preference number: 6 (lower is better)
Translates to: ARNSQCRHQTAS*AWALEVLECRT
Trigger: AGTACGGCATTCCAGAACCTCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGCCGGCACTGTGAATTACGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347869.8
ENST00000464087.6
CDS GCA 72 bp GCTGTGAGAGAGTCTCGGCAGTGTGCTTCTGCCTTGTaGACCCTTATGATGAAGGGACAATGTGAGGCTCAC +
Preference number: 6 (lower is better)
Translates to: AVRESRQCASAL*TLMMKGQCEAH
Trigger: GTGAGCCTCACATTGTCCCTTCATCATAAGGGTGCACAAGGCAGAAGCACACTGCCGAGACTCTCTCACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479275.1
CDS GCA 72 bp CCAGAACAGGTGGGCGTGTCATGGAGTTCAGACATCTaGCATGACAACAGCTCATCATTGGGCCCATCCACA +
Preference number: 6 (lower is better)
Translates to: PEQVGVSWSSDI*HDNSSSLGPST
Trigger: TGTGGATGGGCCCAATGATGAGCTGTTGTCATGGCAGATGTCTGAACTCCATGACACGCCCACCTGTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475128.5
CDS CAA 72 bp ACATACACAGTGCCGGCATCAAACTGCTTCTTGCGCTaGGGCTCTGGAGGTTCTGGAATGCCGTACTTCTCC +
Preference number: 6 (lower is better)
Translates to: TYTVPASNCFLR*GSGGSGMPYFS
Trigger: GGAGAAGTACGGCATTCCAGAACCTCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGCCGGCACTGTGTATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000475590.5
CDS CAA 72 bp CACATCACATACACAGTGCCGGCATCAAACTGCTTCTaGCGCTTGGGCTCTGGAGGTTCTGGAATGCCGTAC +
Preference number: 6 (lower is better)
Translates to: HITYTVPASNCF*RLGSGGSGMPY
Trigger: GTACGGCATTCCAGAACCTCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGCCGGCACTGTGTATGTGATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000475590.5
CDS CAA 72 bp ATCACATTTTGTCAACTGCGTGGAGCAGTCAGGTCCTaGAGTGCTAGGCCTGACAGCCTCCTGGTACCAACC +
Preference number: 6 (lower is better)
Translates to: ITFCQLRGAVRS*SARPDSLLVPT
Trigger: GGTTGGTACCAGGAGGCTGTCAGGCCTAGCACTCAAGGACCTGACTGCTCCACGCAGTTGACAAAATGTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479275.1
CDS CAA 90 bp GTGCACATCACATACACAGTGCCGGCATCAAACTGCTTCTTGCGCTaGGGCTCTGGAGGTTCTGGAATGCCGTACTTCTCCCGTCTTTCT +
Preference number: 6 (lower is better)
Translates to: VHITYTVPASNCFLR*GSGGSGMPYFSRLS
Trigger: AGAAAGACGGGAGAAGTACGGCATTCCAGAACCTCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGCCGGCACTGTGTATGTGATGTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000475590.5
CDS GCA 72 bp TGGAGGTTCTGGAATGCCGTACTTCTCCCGTCTTTCTaGAGCTCGGTCTCGGTATTTCATCTCTCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: WRFWNAVLLPSF*SSVSVFHLSLP
Trigger: AGGGAGAGAGAGATGAAATACCGAGACCGAGCTGCAGAAAGACGGGAGAAGTACGGCATTCCAGAACCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347869.8
ENST00000464087.6
ENST00000464988.1
ENST00000475590.5
CDS GCA 72 bp ACATCACATACACAGTGCCGGCATCAAACTGCTTCTTaGGCTTGGGCTCTGGAGGTTCTGGAATGCCGTACT +
Preference number: 6 (lower is better)
Translates to: TSHTQCRHQTAS*AWALEVLECRT
Trigger: AGTACGGCATTCCAGAACCTCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGCCGGCACTGTGTATGTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000475590.5
CDS GCA 72 bp TCATCTCCATTTCGCACCAATTCTGGGATGAGCTGCTaGCTTTCAGCTAAGGCTCCCTGGGAAACAGAGGAC +
Preference number: 6 (lower is better)
Translates to: SSPFRTNSGMSC*LSAKAPWETED
Trigger: GTCCTCTGTTTCCCAGGGAGCCTTAGCTGAAAGGCAGCAGCTCATCCCAGAATTGGTGCGAAATGGAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493993.1
CDS CAA 72 bp TGCTTCCTCAGTCGGAGAGCCAGGTGGATTGGAGGTTaGATTATACAGCTGAGGACTCTGGGACACTACAGC +
Preference number: 6 (lower is better)
Translates to: CFLSRRARWIGG*IIQLRTLGHYS
Trigger: GCTGTAGTGTCCCAGAGTCCTCAGCTGTATAATCAAACCTCCAATCCACCTGGCTCTCCGACTGAGGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000347869.8
ENST00000464087.6
ENST00000489437.1
CDS GCA 72 bp GGCTCCCTTCTTCTCAAAGAGAGCAAAGCCAGCGTCTaGTGCAGCAGATTCTCTCCTTTCTTCTTCCCTCAA +
Preference number: 6 (lower is better)
Translates to: GSLLLKESKASV*CSRFSPFFFPQ
Trigger: TTGAGGGAAGAAGAAAGGAGAGAATCTGCTGCAGCAGACGCTGGCTTTGCTCTCTTTGAGAAGAAGGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000347869.8
ENST00000464087.6
ENST00000475128.5
ENST00000475590.5
CDS GCA 72 bp AATGTGCACATCACATACACAGTGCCGGCATCAAACTaGTTCTTGCGCTTGGGCTCTGGAGGTTCTGGAATG +
Preference number: 6 (lower is better)
Translates to: NVHITYTVPASN*FLRLGSGGSGM
Trigger: CATTCCAGAACCTCCAGAGCCCAAGCGCAAGAAGCAGTTTGATGCCGGCACTGTGTATGTGATGTGCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000475590.5
CDS GCA 72 bp AAACAGCCAGGGCCCCAGCTTACGAACTGGAAAATGTaGACATCACATACACAGTGCCGGCATCAAACTGCT +
Preference number: 6 (lower is better)
Translates to: KQPGPQLTNWKM*TSHTQCRHQTA
Trigger: AGCAGTTTGATGCCGGCACTGTGTATGTGATGTGCACATTTTCCAGTTCGTAAGCTGGGGCCCTGGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000475590.5
CDS CAA 72 bp ATTGCTGTGAGAGAGTCTCGGCAGTGTGCTTCTGCCTaGTGCACCCTTATGATGAAGGGACAATGTGAGGCT +
Preference number: 6 (lower is better)
Translates to: IAVRESRQCASA*CTLMMKGQCEA
Trigger: AGCCTCACATTGTCCCTTCATCATAAGGGTGCACAAGGCAGAAGCACACTGCCGAGACTCTCTCACAGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479275.1
CDS CAA 72 bp CAACAGGATTACCGGAGAGCCAGGTGGATTGGAGGTTaGATTATACAGCTGAGGACTCTGGGACACTACAGC +
Preference number: 6 (lower is better)
Translates to: QQDYRRARWIGG*IIQLRTLGHYS
Trigger: GCTGTAGTGTCCCAGAGTCCTCAGCTGTATAATCAAACCTCCAATCCACCTGGCTCTCCGGTAATCCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494360.5
CDS TCA 72 bp GATTCTCCTCATCTCCATTTCGCACCAATTCTGGGATaGGCTGCTGCCTTTCAGCTAAGGCTCCCTTCTTCT +
Preference number: 6 (lower is better)
Translates to: DSPHLHFAPILG*AAAFQLRLPSS
Trigger: AGAAGAAGGGAGCCTTAGCTGAAAGGCAGCAGCTCATCCCAGAATTGGTGCGAAATGGAGATGAGGAGAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347869.8
ENST00000464087.6
ENST00000475128.5
ENST00000475590.5
ENST00000492430.1
CDS TCA 72 bp GGATGCGGAGTAAAGGTAAACGGAGTCAGGGAGTGCTaGGAAAGCTGTCAAACACTAAACGCTGACTTGCAC +
Preference number: 6 (lower is better)
Translates to: GCGVKVNGVREC*ESCQTLNADLH
Trigger: GTGCAAGTCAGCGTTTAGTGTTTGACAGCTTTCTCAGCACTCCCTGACTCCGTTTACCTTTACTCCGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000462025.1
ENST00000464087.6
ENST00000496179.5
CDS GCA 72 bp TCCTCATCTCCATTTCGCACCAATTCTGGGATGAGCTaGTGCCTTTCAGCTAAGGCTCCCTTCTTCTCAAAG +
Preference number: 6 (lower is better)
Translates to: SSSPFRTNSGMS*CLSAKAPFFSK
Trigger: CTTTGAGAAGAAGGGAGCCTTAGCTGAAAGGCAGCAGCTCATCCCAGAATTGGTGCGAAATGGAGATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347869.8
ENST00000464087.6
ENST00000475128.5
ENST00000475590.5
ENST00000492430.1
CDS GCA 72 bp TGGAGGTTCTGGAATGCCGTACTTCTCCCGTCTTTCTaGAGCTCGGTCTCGGTATTTCATCTCCAACATTTG +
Preference number: 6 (lower is better)
Translates to: WRFWNAVLLPSF*SSVSVFHLQHL
Trigger: CAAATGTTGGAGATGAAATACCGAGACCGAGCTGCAGAAAGACGGGAGAAGTACGGCATTCCAGAACCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461242.1
CDS GCA 72 bp CTTACGAACTGGAAAATGTGCACATCACATACACAGTaGCGGCATCAAACTGCTTCTTGCGCTTGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: LTNWKMCTSHTQ*RHQTASCAWAL
Trigger: CAGAGCCCAAGCGCAAGAAGCAGTTTGATGCCGGCACTGTGTATGTGATGTGCACATTTTCCAGTTCGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000475590.5
CDS GCA 72 bp TGCAAACTTTGGGCCACAGTGGGACTGACACTACCCTaGACTAAAGAAAGGCAGATGCAGAATGCAAACCAG +
Preference number: 6 (lower is better)
Translates to: CKLWATVGLTLP*TKERQMQNANQ
Trigger: CTGGTTTGCATTCTGCATCTGCCTTTCTTTAGTGCAGGGTAGTGTCAGTCCCACTGTGGCCCAAAGTTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471995.5
CDS CCA 72 bp AGCACACTTCGGAAAAATCAGTGCTCTGGAATTAAATaGACAACATACGGGGAGGACCAACCACCGCCACCT +
Preference number: 6 (lower is better)
Translates to: STLRKNQCSGIK*TTYGEDQPPPP
Trigger: AGGTGGCGGTGGTTGGTCCTCCCCGTATGTTGTCCATTTAATTCCAGAGCACTGATTTTTCCGAAGTGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000462025.1
ENST00000464087.6
ENST00000496179.5
CDS CCA 72 bp GGAGTTCAGACATCTGCCATGACAACAGCTCATCATTaGGCCCATCCACATAGAATCCATTGGATACCAGGC +
Preference number: 6 (lower is better)
Translates to: GVQTSAMTTAHH*AHPHRIHWIPG
Trigger: GCCTGGTATCCAATGGATTCTATGTGGATGGGCCCAATGATGAGCTGTTGTCATGGCAGATGTCTGAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475128.5
CDS TCA 72 bp TTAACGCAGAATGCAAACTTTGGGCCACAGTGGGACTaGCACTACCCTGCACTAAAGAAAGGCAGATGCAGA +
Preference number: 6 (lower is better)
Translates to: LTQNANFGPQWD*HYPALKKGRCR
Trigger: TCTGCATCTGCCTTTCTTTAGTGCAGGGTAGTGTCAGTCCCACTGTGGCCCAAAGTTTGCATTCTGCGTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471995.5
CDS GCA 72 bp TCATCTCCATTTCGCACCAATTCTGGGATGAGCTGCTaGCTTTCAGCTAAGGCTCCCTTCTTCTCAAAGAGA +
Preference number: 6 (lower is better)
Translates to: SSPFRTNSGMSC*LSAKAPFFSKR
Trigger: TCTCTTTGAGAAGAAGGGAGCCTTAGCTGAAAGGCAGCAGCTCATCCCAGAATTGGTGCGAAATGGAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347869.8
ENST00000464087.6
ENST00000475128.5
ENST00000475590.5
ENST00000492430.1
CDS CCA 72 bp TGTTGCCAATGTTACTGTGGTCAATGCCATCTTTGGTaGGTTGCTCGTAATTCCTGCCAGTGGCAAACACAC +
Preference number: 6 (lower is better)
Translates to: CCQCYCGQCHLW*VARNSCQWQTH
Trigger: GTGTGTTTGCCACTGGCAGGAATTACGAGCAACCCACCAAAGATGGCATTGACCACAGTAACATTGGCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000475590.5
CDS CCA 72 bp CACACAGAGGCTGGGTCTAGGCTACATGAACTACAATaGTCAGATGACAAGGGTATGACAAATCCTCCTACC +
Preference number: 6 (lower is better)
Translates to: HTEAGSRLHELQ*SDDKGMTNPPT
Trigger: GGTAGGAGGATTTGTCATACCCTTGTCATCTGACCATTGTAGTTCATGTAGCCTAGACCCAGCCTCTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479275.1
ENST00000492430.1
CDS CCA 72 bp ACAGCTCATCATTGGGCCCATCCACATAGAATCCATTaGATACCAGGCAACCACACACAGGGTGTAAACACT +
Preference number: 6 (lower is better)
Translates to: TAHHWAHPHRIH*IPGNHTQGVNT
Trigger: AGTGTTTACACCCTGTGTGTGGTTGCCTGGTATCCAATGGATTCTATGTGGATGGGCCCAATGATGAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475128.5
CDS CCA 72 bp ACAGACTATTTACATAAACCAGGCAGCCAGAACAGGTaGGCGTGTCATGGAGTTCAGACATCTGCCATGACA +
Preference number: 6 (lower is better)
Translates to: TDYLHKPGSQNR*ACHGVQTSAMT
Trigger: TGTCATGGCAGATGTCTGAACTCCATGACACGCCCACCTGTTCTGGCTGCCTGGTTTATGTAAATAGTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475128.5
CDS CCA 72 bp TATAGGACAACAGGATTACCGGAGAGCCAGGTGGATTaGAGGTTTGATTATACAGCTGAGGACTCTGGGACA +
Preference number: 6 (lower is better)
Translates to: YRTTGLPESQVD*RFDYTAEDSGT
Trigger: TGTCCCAGAGTCCTCAGCTGTATAATCAAACCTCCAATCCACCTGGCTCTCCGGTAATCCTGTTGTCCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494360.5
CDS CAA 72 bp GCCAATGTTACTGTGGTCAATGCCATCTTTGGTGGGTaGCTCGTAATTCCTGCCAGTGGCAAACACACAGTT +
Preference number: 6 (lower is better)
Translates to: ANVTVVNAIFGG*LVIPASGKHTV
Trigger: AACTGTGTGTTTGCCACTGGCAGGAATTACGAGCAACCCACCAAAGATGGCATTGACCACAGTAACATTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000475590.5
CDS GCA 72 bp GGTCAATGCCATCTTTGGTGGGTTGCTCGTAATTCCTaGCAGTGGCAAACACACAGTTACTTAAAACAGCCA +
Preference number: 6 (lower is better)
Translates to: GQCHLWWVARNS*QWQTHSYLKQP
Trigger: TGGCTGTTTTAAGTAACTGTGTGTTTGCCACTGGCAGGAATTACGAGCAACCCACCAAAGATGGCATTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464988.1
ENST00000475590.5
CDS CCA 72 bp TGTTGCCAATGTTACTGTGGTCAATGCCATCTTTGGTaGGTTGCTCGTAATTCACAGTGCCGGCATCAAACT +
Preference number: 6 (lower is better)
Translates to: CCQCYCGQCHLW*VARNSQCRHQT
Trigger: AGTTTGATGCCGGCACTGTGAATTACGAGCAACCCACCAAAGATGGCATTGACCACAGTAACATTGGCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000347869.8
ENST00000464087.6
CDS CAA 72 bp TCCCTGGGCCTACCTAGAGGGCACCCAAAGAGCAATTaGTCTCACTCTGTTCCACAGACTATTTACATAAAC +
Preference number: 6 (lower is better)
Translates to: SLGLPRGHPKSN*SHSVPQTIYIN
Trigger: GTTTATGTAAATAGTCTGTGGAACAGAGTGAGACAAATTGCTCTTTGGGTGCCCTCTAGGTAGGCCCAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475128.5
CDS TCA 72 bp TTGAAGACTGGGGGAATCAGGATGTTCTTTAGGGACTaGGGTGGGAATGGGGAAGAGAACAATAATATCAGG +
Preference number: 6 (lower is better)
Translates to: LKTGGIRMFFRD*GGNGEENNNIR
Trigger: CCTGATATTATTGTTCTCTTCCCCATTCCCACCTCAGTCCCTAAAGAACATCCTGATTCCCCCAGTCTTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000433556.6
ENST00000469838.5
CDS GCA 72 bp TATTACCTTCTTCTCAAAGAGAGCAAAGCCAGCGTCTaGTGCAGCAGATTCTCTCCTTTCTTCTTCCCTCAA +
Preference number: 6 (lower is better)
Translates to: YYLLLKESKASV*CSRFSPFFFPQ
Trigger: TTGAGGGAAGAAGAAAGGAGAGAATCTGCTGCAGCAGACGCTGGCTTTGCTCTCTTTGAGAAGAAGGTAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493993.1
CDS CCA 72 bp ATCTCATCTGCTCTCACAGAAAACAAAGCCCCGACATaGAATCTATGTGCAGAAACTGCTCCAATACCCATC +
Preference number: 6 (lower is better)
Translates to: ISSALTENKAPT*NLCAETAPIPI
Trigger: GATGGGTATTGGAGCAGTTTCTGCACATAGATTCCATGTCGGGGCTTTGTTTTCTGTGAGAGCAGATGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479275.1
CDS CCA 72 bp TTGTATATAGGACAACAGGATTACCGGAGAGCCAGGTaGATTGGAGGTTTGATTATACAGCTGAGGACTCTG +
Preference number: 6 (lower is better)
Translates to: LYIGQQDYRRAR*IGGLIIQLRTL
Trigger: CAGAGTCCTCAGCTGTATAATCAAACCTCCAATCCACCTGGCTCTCCGGTAATCCTGTTGTCCTATATACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494360.5
CDS CCA 72 bp ATTAATTGTGACTTGGTTAACGCAGAATGCAAACTTTaGGCCACAGTGGGACTGACACTACCCTGCACTAAA +
Preference number: 6 (lower is better)
Translates to: INCDLVNAECKL*ATVGLTLPCTK
Trigger: TTTAGTGCAGGGTAGTGTCAGTCCCACTGTGGCCCAAAGTTTGCATTCTGCGTTAACCAAGTCACAATTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471995.5
CDS TCA 72 bp AGCCATGAGACTCAAGTTTTAGGTAAGTTCCCATCATaGCATACTGGCCATTCCTGCTATTACCTTCTTCTC +
Preference number: 6 (lower is better)
Translates to: SHETQVLGKFPS*HTGHSCYYLLL
Trigger: GAGAAGAAGGTAATAGCAGGAATGGCCAGTATGTCATGATGGGAACTTACCTAAAACTTGAGTCTCATGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493993.1
CDS CAA 72 bp ATTACTGCATGTCACACTTTAGTAATGAATCACATTTaGTCAACTGCGTGGAGCAGTCAGGTCCTTGAGTGC +
Preference number: 6 (lower is better)
Translates to: ITACHTLVMNHI*STAWSSQVLEC
Trigger: GCACTCAAGGACCTGACTGCTCCACGCAGTTGACAAAATGTGATTCATTACTAAAGTGTGACATGCAGTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479275.1
CDS TCA 72 bp ATAATAGAGCCCTGTTGTCGGATCATAGTAATATCCTaGAGATTCATCATACTGGTAAGTGGACGTGTCAGG +
Preference number: 6 (lower is better)
Translates to: IIEPCCRIIVIS*RFIILVSGRVR
Trigger: CCTGACACGTCCACTTACCAGTATGATGAATCTTCAGGATATTACTATGATCCGACAACAGGGCTCTATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000347869.8
ENST00000441812.6
ENST00000464087.6
ENST00000474818.5
ENST00000489437.1
CDS GCA 72 bp CATGAGAAAATAATGGTAGAAGCTCAAAGTTCATTGTaGCTACTGACTGCTGGTTATAACTGTCATTTCCCC +
Preference number: 6 (lower is better)
Translates to: HEKIMVEAQSSL*LLTAGYNCHFP
Trigger: GGGGAAATGACAGTTATAACCAGCAGTCAGTAGGCACAATGAACTTTGAGCTTCTACCATTATTTTCTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492472.1
CDS CAA 72 bp TCTGGGATTGCTATAATGCATTGCAATGTGCTTTCCTaGAATCACCAACTTTTTCTGATTGGCTTCCATCCA +
Preference number: 6 (lower is better)
Translates to: SGIAIMHCNVLS*NHQLFLIGFHP
Trigger: TGGATGGAAGCCAATCAGAAAAAGTTGGTGATTCAAGGAAAGCACATTGCAATGCATTATAGCAATCCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000347869.8
CDS TCA 72 bp AATGCACACACCACCTCATCCTTCAAGTCAACCATGTaGCTACAAGGACTTAGCTTTAAAAAGTCAAAATTC +
Preference number: 6 (lower is better)
Translates to: NAHTTSSFKSTM*LQGLSFKKSKF
Trigger: GAATTTTGACTTTTTAAAGCTAAGTCCTTGTAGTCACATGGTTGACTTGAAGGATGAGGTGGTGTGTGCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000464087.6