RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RBM47 (Homo sapiens)

Ensembl gene IDs: ENSG00000163694

Ensembl transcript IDs: ENST00000295971.12, ENST00000381793.6, ENST00000381795.10, ENST00000505220.1, ENST00000505414.5, ENST00000507180.5, ENST00000510871.5, ENST00000511598.5, ENST00000511902.5, ENST00000513044.1, ENST00000513473.5, ENST00000514014.1, ENST00000514782.5, ENST00000515053.5, ENST00000515809.1

Found 869 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTATTGGGCGGCCCTGGAAAGGTGGTGGCGTCGACACAGTGGGAATaGCAGCGGCTGCGGCGGCTGCGGCCGCGGCTGCGGCGGCAGCAG +
Preference number: 1 (lower is better)
Translates to: LLGGPGKVVASTQWE*QRLRRLRPRLRRQQ
Trigger: CTGCTGCCGCCGCAGCCGCGGCCGCAGCCGCCGCAGCCGCTGTCATTCCCACTGTGTCGACGCCACCACCTTTCCAGGGCCGCCCAATAA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR GCA 90 bp GGGGACCTGAATGGCAGCAGCAGGGAAGGCCTGAGGTATGTAGCCTaGGTATCCTCCATACATGGCGGCCGCGGCTGCCGCGTTCTTCTG +
Preference number: 1 (lower is better)
Translates to: GDLNGSSREGLRYVA*VSSIHGGRGCRVLL
Trigger: CAGAAGAACGCGGCAGCCGCGGCCGCCATGTATGGAGGATACGCAGGCTACATACCTCAGGCCTTCCCTGCTGCTGCCATTCAGGTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR CCA 90 bp ACCACGACCAGCAGAATATCCCCCGAGGTAGGAACCCCTAGGCCCTaGGGCTCTGTTGCCAGCTGCACCTCGCCCTCGGCCTCTTATGCT +
Preference number: 1 (lower is better)
Translates to: TTTSRISPEVGTPRP*GSVASCTSPSASYA
Trigger: AGCATAAGAGGCCGAGGGCGAGGTGCAGCTGGCAACAGAGCCCCAGGGCCTAGGGGTTCCTACCTCGGGGGATATTCTGCTGGTCGTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR CCA 90 bp CAGCAGGGAAGGCCTGAGGTATGTAGCCTGCGTATCCTCCATACATaGCGGCCGCGGCTGCCGCGTTCTTCTGTAGTGTGGCGATCGTGG +
Preference number: 1 (lower is better)
Translates to: QQGRPEVCSLRILHT*RPRLPRSSVVWRSW
Trigger: CCACGATCGCCACACTACAGAAGAACGCGGCAGCCGCGGCCGCCATGTATGGAGGATACGCAGGCTACATACCTCAGGCCTTCCCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR CCA 90 bp ACCAGCCTCAGTATGTCTGGTAGACGTCGGGGATGGGGACCTGAATaGCAGCAGCAGGGAAGGCCTGAGGTATGTAGCCTGCGTATCCTC +
Preference number: 1 (lower is better)
Translates to: TSLSMSGRRRGWGPE*QQQGRPEVCSLRIL
Trigger: GAGGATACGCAGGCTACATACCTCAGGCCTTCCCTGCTGCTGCCATTCAGGTCCCCATCCCCGACGTCTACCAGACATACTGAGGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR CCA 90 bp TTCGTGCTGGTCACCAGCCTCAGTATGTCTGGTAGACGTCGGGGATaGGGACCTGAATGGCAGCAGCAGGGAAGGCCTGAGGTATGTAGC +
Preference number: 1 (lower is better)
Translates to: FVLVTSLSMSGRRRG*GPEWQQQGRPEVCS
Trigger: GCTACATACCTCAGGCCTTCCCTGCTGCTGCCATTCAGGTCCCCATCCCCGACGTCTACCAGACATACTGAGGCTGGTGACCAGCACGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR TCA 90 bp CGGCGGCAGCAGCACTGGCTGGGTCTGGCTGCACAGCAATGGGGCTaGTCATGTGCTCCACTGTGTGGATTTTGCCATCTTCAATCATTT +
Preference number: 1 (lower is better)
Translates to: RRQQHWLGLAAQQWG*SCAPLCGFCHLQSF
Trigger: AAATGATTGAAGATGGCAAAATCCACACAGTGGAGCACATGATCAGCCCCATTGCTGTGCAGCCAGACCCAGCCAGTGCTGCTGCCGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR CCA 90 bp GTAACTGGCCCCGTAGATCCCGGCAGTAGGAATTCTCTGAACGTTTaGAGCCACCGTGTATACTGGAGTTATTGGGCGGCCCTGGAAAGG +
Preference number: 1 (lower is better)
Translates to: VTGPVDPGSRNSLNV*SHRVYWSYWAALER
Trigger: CCTTTCCAGGGCCGCCCAATAACTCCAGTATACACGGTGGCTCCAAACGTTCAGAGAATTCCTACTGCCGGGATCTACGGGGCCAGTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR CCA 90 bp AGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTaGTCACCAGCCTCAGTATGTCTGGTAGACGTCGGGGATGGGGAC +
Preference number: 1 (lower is better)
Translates to: SQAFLQWCLCGLSSC*SPASVCLVDVGDGD
Trigger: GTCCCCATCCCCGACGTCTACCAGACATACTGAGGCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR GCA 90 bp GCCCTGGGGCTCTGTTGCCAGCTGCACCTCGCCCTCGGCCTCTTATaGTGCCTGCTTGTAATAACAACACAAAAGATGATCAGCAACCAA +
Preference number: 1 (lower is better)
Translates to: ALGLCCQLHLALGLL*CLLVITTQKMISNQ
Trigger: TTGGTTGCTGATCATCTTTTGTGTTGTTATTACAAGCAGGCAGCATAAGAGGCCGAGGGCGAGGTGCAGCTGGCAACAGAGCCCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR GCA 90 bp CTGGGGCTCTGTTGCCAGCTGCACCTCGCCCTCGGCCTCTTATGCTaGCTGCTTGTAATAACAACACAAAAGATGATCAGCAACCAACAG +
Preference number: 1 (lower is better)
Translates to: LGLCCQLHLALGLLC*LLVITTQKMISNQQ
Trigger: CTGTTGGTTGCTGATCATCTTTTGTGTTGTTATTACAAGCAGGCAGCATAAGAGGCCGAGGGCGAGGTGCAGCTGGCAACAGAGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR GCA 90 bp AATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTaGTGGTCACCAGCCTCAGTATGTCTGGTAGACGTCGGGGATGGG +
Preference number: 1 (lower is better)
Translates to: NSQAFLQWCLCGLSS*WSPASVCLVDVGDG
Trigger: CCCATCCCCGACGTCTACCAGACATACTGAGGCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGACTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR GCA 90 bp ACGGTGCTGGAGGCAGACCTCAGCCCTCGGTTCTCGGCATTTAACTaGCCCAGTCTTAATTGCAGGTGGCTACACCTTTGCTCTTTAATA +
Preference number: 1 (lower is better)
Translates to: TVLEADLSPRFSAFN*PSLNCRWLHLCSLI
Trigger: TATTAAAGAGCAAAGGTGTAGCCACCTGCAATTAAGACTGGGGCAGTTAAATGCCGAGAACCGAGGGCTGAGGTCTGCCTCCAGCACCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR CCA 90 bp AATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTaGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCCTCAGTA +
Preference number: 1 (lower is better)
Translates to: NPTCSFFINSQAFLQ*CLCGLSSCWSPASV
Trigger: TACTGAGGCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACATGTTGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR CCA 90 bp ATAGGAACAGATAAGTCCCAGATAGGAGGCTCACTGATACTTAATTaGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGC +
Preference number: 1 (lower is better)
Translates to: IGTDKSQIGGSLILN*PCHQCLFLREFGGC
Trigger: GCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATTAAGTATCAGTGAGCCTCCTATCTGGGACTTATCTGTTCCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
3UTR CCA 90 bp TGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTaGGGTACATCATCAGGAACATTGCACAATTATTTTATGTCATTT +
Preference number: 1 (lower is better)
Translates to: CRVTHSHRFEFECSL*GTSSGTLHNYFMSF
Trigger: AAATGACATAAAATAATTGTGCAATGTTCCTGATGATGTACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR GCA 90 bp ATTACATTTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATaGAGCTTGTGGGGTACATCATCAGGAACATTGCACAATTATTTT +
Preference number: 1 (lower is better)
Translates to: ITFCRVTHSHRFEFE*SLWGTSSGTLHNYF
Trigger: AAAATAATTGTGCAATGTTCCTGATGATGTACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAAATGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR GCA 90 bp GTGTGGTCTGTCTTCGTGCTGGTCACCAGCCTCAGTATGTCTGGTAGACGTCGGGGCTCTGTTGCCAGCTaGACCTCGCCCTCGGCCTCT +
Preference number: 2 (lower is better)
Translates to: VWSVFVLVTSLSMSGRRRGSVAS*TSPSAS
Trigger: AGAGGCCGAGGGCGAGGTGCAGCTGGCAACAGAGCC...CCGACGTCTACCAGACATACTGAGGCTGGTGACCAGCACGAAGACAGACCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR CCA 90 bp GTGTGGTCTGTCTTCGTGCTGGTCACCAGCCTCAGTATGTCTGGTAGACGTCGGGGAACCCCTAGGCCCTaGGGCTCTGTTGCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: VWSVFVLVTSLSMSGRRRGTPRP*GSVASC
Trigger: GCAGCTGGCAACAGAGCCCCAGGGCCTAGGGGTTCC...CCGACGTCTACCAGACATACTGAGGCTGGTGACCAGCACGAAGACAGACCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR CCA 90 bp CCATACATGGCGGCCGCGGCTGCCGCGTTCTTCTGTAGTGTGGCGATCGTGGCTGAGCTTTCCAGTGTTTaGACTCAGAAGTGCGGCAAG +
Preference number: 2 (lower is better)
Translates to: PYMAAAAAAFFCSVAIVAELSSV*TQKCGK
Trigger: CTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTC...AGCCACGATCGCCACACTACAGAAGAACGCGGCAGCCGCGGCCGCCATGTATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR CCA 90 bp ACCAGCCTCAGTATGTCTGGTAGACGTCGGGGATGGGGACCTGAATGGCAGCAGGCCCTGGAAAGGTGGTaGCGTCGACACAGTGGGAAT +
Preference number: 2 (lower is better)
Translates to: TSLSMSGRRRGWGPEWQQALERW*RRHSGN
Trigger: ATTCCCACTGTGTCGACGCCACCACCTTTCCAGGGC...CTGCTGCCATTCAGGTCCCCATCCCCGACGTCTACCAGACATACTGAGGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR TCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGATCGACACAGTGGGAATaGCAGCGGCTGCGGCGGCTG +
Preference number: 2 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGSTQWE*QRLRRL
Trigger: CAGCCGCCGCAGCCGCTGTCATTCCCACTGTGTCGA...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR GCA 90 bp TGGAGTTATTGGGCGGCCCTGGAAAGGTGGTGGCGTCGACACAGTGGGAATGACTGCCCCAGTCTTAATTaGAGGTGGCTACACCTTTGC +
Preference number: 2 (lower is better)
Translates to: WSYWAALERWWRRHSGNDCPSLN*RWLHLC
Trigger: GCAAAGGTGTAGCCACCTGCAATTAAGACTGGGGCA...GTCATTCCCACTGTGTCGACGCCACCACCTTTCCAGGGCCGCCCAATAACTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR GCA 90 bp ACCAGCCTCAGTATGTCTGGTAGACGTCGGGGATGGGGACCTGAATGGCAGCAGATGGGGCTGATCATGTaGTCCACTGTGTGGATTTTG +
Preference number: 2 (lower is better)
Translates to: TSLSMSGRRRGWGPEWQQMGLIM*STVWIL
Trigger: CAAAATCCACACAGTGGAGCACATGATCAGCCCCAT...CTGCTGCCATTCAGGTCCCCATCCCCGACGTCTACCAGACATACTGAGGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR CCA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGTGGGATTGGGAATCTaGGGAGGAGGGGACAGGGTG +
Preference number: 2 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVVGLGI*GGGDRV
Trigger: CACCCTGTCCCCTCCTCCCCAGATTCCCAATCCCAC...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CCA 90 bp TGGAGTTATTGGGCGGCCCTGGAAAGGTGGTGGCGTCGACACAGTGGGAATGACAGGTTTAATGGCAACTaGGTTGACGGTAGGGATTTC +
Preference number: 2 (lower is better)
Translates to: WSYWAALERWWRRHSGNDRFNGN*VDGRDF
Trigger: GAAATCCCTACCGTCAACCCAGTTGCCATTAAACCT...GTCATTCCCACTGTGTCGACGCCACCACCTTTCCAGGGCCGCCCAATAACTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR GCA 90 bp AGCTGGAGCAGCAAATGGCACGTAACTGGCCCCGTAGATCCCGGCAGTAGGAATTTCTCGGCATTTAACTaGCCCAGTCTTAATTGCAGG +
Preference number: 2 (lower is better)
Translates to: SWSSKWHVTGPVDPGSRNFSAFN*PSLNCR
Trigger: CCTGCAATTAAGACTGGGGCAGTTAAATGCCGAGAA...ATTCCTACTGCCGGGATCTACGGGGCCAGTTACGTGCCATTTGCTGCTCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR GCA 90 bp AGCTGCTGGAAACATGGAATACTGAGCCCCAATGGCAGGGATGGCTACTGTACCGCCCTCGGCCTCTTATaGTGCCTGCTTGTAATAACA +
Preference number: 2 (lower is better)
Translates to: SCWKHGILSPNGRDGYCTALGLL*CLLVIT
Trigger: TGTTATTACAAGCAGGCAGCATAAGAGGCCGAGGGC...GGTACAGTAGCCATCCCTGCCATTGGGGCTCAGTATTCCATGTTTCCAGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR TCA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTAAAGGCACATGGAGAATaGGCCCCGGCTAACGGTGGC +
Preference number: 2 (lower is better)
Translates to: FVESLIPTDLSLNAACGVKAHGE*APANGG
Trigger: GCCACCGTTAGCCGGGGCTCATTCTCCATGTGCCTT...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR TCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGTCGGGGATGGGGACCTaGATGGCAGCAGCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: ARTIASLLEMYERRHAKLSGMGT*MAAAGK
Trigger: CTTCCCTGCTGCTGCCATTCAGGTCCCCATCCCCGA...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR GCA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGTCCTCCTCCTGGATGTaGACACCCCAATCCAGTTCA +
Preference number: 2 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVSSSWM*TPQSSS
Trigger: TGAACTGGATTGGGGTGTGCACATCCAGGAGGAGGA...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR GCA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCGCCCTGGGGCTCTGTTaGCAGCTGCACCTCGCCCTC +
Preference number: 2 (lower is better)
Translates to: VSYATRLKPCAYSATENSALGLC*QLHLAL
Trigger: GAGGGCGAGGTGCAGCTGGCAACAGAGCCCCAGGGC...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR CCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGTGGGATTGGGAATCTaGGGAGGAGGGGACAGGGTG +
Preference number: 2 (lower is better)
Translates to: KESFPVFGLRSAASLFNVVGLGI*GGGDRV
Trigger: CACCCTGTCCCCTCCTCCCCAGATTCCCAATCCCAC...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CCA 90 bp AAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGGTTATTGGGCGGCCCTaGAAAGGTGGTGGCGTCGAC +
Preference number: 2 (lower is better)
Translates to: KYKSHQLLYQSYLSVLGLVIGRP*KGGGVD
Trigger: GTCGACGCCACCACCTTTCCAGGGCCGCCCAATAAC...CAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTGGTGGCTTTTATACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR TCA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATAAGGCACATGGAGAATaGGCCCCGGCTAACGGTGGC +
Preference number: 2 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHKAHGE*APANGG
Trigger: GCCACCGTTAGCCGGGGCTCATTCTCCATGTGCCTT...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGGTGGGATTGGGAATCTaGGGAGGAGGGGACAGGGTG +
Preference number: 2 (lower is better)
Translates to: ARTIASLLEMYERRHAKLVGLGI*GGGDRV
Trigger: CACCCTGTCCCCTCCTCCCCAGATTCCCAATCCCAC...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR GCA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACTCCTCCTCCTGGATGTaGACACCCCAATCCAGTTCA +
Preference number: 2 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHSSSWM*TPQSSS
Trigger: TGAACTGGATTGGGGTGTGCACATCCAGGAGGAGGA...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR GCA 90 bp GGAACAGATAAGTCCCAGATAGGAGGCTCACTGATACTTAATTGGCCATGTCACTCCTCCTCCTGGATGTaGACACCCCAATCCAGTTCA +
Preference number: 2 (lower is better)
Translates to: GTDKSQIGGSLILNWPCHSSSWM*TPQSSS
Trigger: TGAACTGGATTGGGGTGTGCACATCCAGGAGGAGGA...GTGACATGGCCAATTAAGTATCAGTGAGCCTCCTATCTGGGACTTATCTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
3UTR-3UTR CCA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGAGGGGCTGGAGCTGCTaGAAACATGGAATACTGAGC +
Preference number: 2 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMRGWSC*KHGILS
Trigger: GCTCAGTATTCCATGTTTCCAGCAGCTCCAGCCCCT...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR CCA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTAAGCTGGAGCAGCAAATaGCACGTAACTGGCCCCGTA +
Preference number: 2 (lower is better)
Translates to: FVESLIPTDLSLNAACGVSWSSK*HVTGPV
Trigger: TACGGGGCCAGTTACGTGCCATTTGCTGCTCCAGCT...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR CAA 90 bp CCAATGGCAGGGATGGCTACTGTACCAGGTTTAATGGCAACTGGGTaGACGGTAGGGATTTCCAAATTCGGCACCAGTTCATATCCTTTT +
Preference number: 2 (lower is better)
Translates to: PMAGMATVPGLMATG*TVGISKFGTSSYPF
Trigger: AAAAGGATATGAACTGGTGCCGAATTTGGAAATCCCTACCGTCAACCCAGTTGCCATTAAACCTGGTACAGTAGCCATCCCTGCCATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR TCA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACCACACAGTCAGGGGATaGGGATCTGATCCGAATTAC +
Preference number: 2 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHHTVRG*GSDPNY
Trigger: GTAATTCGGATCAGATCCTCATCCCCTGACTGTGTG...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR TCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGAAACATGGAATACTaGGCCCCAATGGCAGGGATG +
Preference number: 2 (lower is better)
Translates to: KESFPVFGLRSAASLFNVGNMEY*APMAGM
Trigger: CATCCCTGCCATTGGGGCTCAGTATTCCATGTTTCC...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR CAA 90 bp ACATGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTaGTGTGGTCTGTCTTCGTGCTGGTCACCAGCCTCAGTATGTCTG +
Preference number: 2 (lower is better)
Translates to: TCSFFINSQAFLQWC*CGLSSCWSPASVCL
Trigger: CAGACATACTGAGGCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR TCA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATGCAGTAGGAATTCTCTaGACGTTTGGAGCCACCGTG +
Preference number: 2 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHAVGIL*TFGATV
Trigger: CACGGTGGCTCCAAACGTTCAGAGAATTCCTACTGC...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR GCA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTAAGGCTTGCCAAACATTaGGGTGGGATTGGGAATCTG +
Preference number: 2 (lower is better)
Translates to: FVESLIPTDLSLNAACGVRLAKH*GGIGNL
Trigger: CAGATTCCCAATCCCACCGCAATGTTTGGCAAGCCT...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CCA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGCAAGCGTTCCTTCAGTaGTGTTTGTGTGGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMQAFLQ*CLCGLS
Trigger: AGACAGACCACACAAACACCACTGAAGGAACGCTTG...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CCA 90 bp AAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGGAGCTTTCCAGTGTTTaGACTCAGAAGTGCGGCAAG +
Preference number: 2 (lower is better)
Translates to: KYKSHQLLYQSYLSVLGLELSSV*TQKCGK
Trigger: CTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTC...CAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTGGTGGCTTTTATACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CCA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCAAGCCACCGTGTATACTaGAGTTATTGGGCGGCCCTG +
Preference number: 2 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSSHRVY*SYWAAL
Trigger: CAGGGCCGCCCAATAACTCCAGTATACACGGTGGCT...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR CCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTGATCGTGGCTGTAGCTaGAGCAGCAAATGGCACGTA +
Preference number: 2 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRDRGCS*SSKWHV
Trigger: TACGTGCCATTTGCTGCTCCAGCTACAGCCACGATC...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR GCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGAGTTTGGACTCAGAAGTaGGGCAAGTCTTTTCAATGT +
Preference number: 2 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGVWTQK*GKSFQC
Trigger: ACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAAC...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR GCA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTATTTAGGGGCTGGAGCTaGTGGAAACATGGAATACTG +
Preference number: 2 (lower is better)
Translates to: FVESLIPTDLSLNAACGVFRGWS*WKHGIL
Trigger: CAGTATTCCATGTTTCCAGCAGCTCCAGCCCCTAAA...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR CCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGGAGCTTTCCAGTGTTTaGACTCAGAAGTGCGGCAAG +
Preference number: 2 (lower is better)
Translates to: ARTIASLLEMYERRHAKLELSSV*TQKCGK
Trigger: CTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTC...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGACATTGCGGTGGGATTaGGAATCTGGGGAGGAGGGG +
Preference number: 2 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKTLRWD*ESGEEG
Trigger: CCCCTCCTCCCCAGATTCCCAATCCCACCGCAATGT...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTAATCATTTTAGGGGCTaGAGCTGCTGGAAACATGGA +
Preference number: 2 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLANHFRG*SCWKHG
Trigger: TCCATGTTTCCAGCAGCTCCAGCCCCTAAAATGATT...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR TCA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTAGGCATGATCCTCTTATaGATCCACAAGAATTCAGCC +
Preference number: 2 (lower is better)
Translates to: FVESLIPTDLSLNAACGVGMILL*IHKNSA
Trigger: GGCTGAATTCTTGTGGATTCATAAGAGGATCATGCC...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR TCA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTCACACAGTCAGGGGATaGGGATCTGATCCGAATTAC +
Preference number: 2 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVHTVRG*GSDPNY
Trigger: GTAATTCGGATCAGATCCTCATCCCCTGACTGTGTG...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
3UTR-3UTR GCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGATCTTCACTTTCAGGTTaGATGTGTGAATCCAACATG +
Preference number: 2 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGSSLSG*MCESNM
Trigger: CATGTTGGATTCACACATGCAACCTGAAAGTGAAGA...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR GCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTGTTTGGACTCAGAAGTaGGGCAAGTCTTTTCAATGT +
Preference number: 2 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLAVWTQK*GKSFQC
Trigger: ACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAAC...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR GCA 90 bp AAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCTCGGCCTCTTATGCTaGCTGCTTGTAATAACAACA +
Preference number: 2 (lower is better)
Translates to: KYKSHQLLYQSYLSVLGLLGLLC*LLVITT
Trigger: TGTTGTTATTACAAGCAGGCAGCATAAGAGGCCGAG...CAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTGGTGGCTTTTATACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR GCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACATGTGGTCTGTCTTCGTaGTGGTCACCAGCCTCAGTA +
Preference number: 2 (lower is better)
Translates to: QVHSKGREAHLINIMFPTCGLSS*WSPASV
Trigger: TACTGAGGCTGGTGACCAGCACGAAGACAGACCACA...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR CCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTCAAGCGTTCCTTCAGTaGTGTTTGTGTGGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRQAFLQ*CLCGLS
Trigger: AGACAGACCACACAAACACCACTGAAGGAACGCTTG...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR TCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTTTCAGGTTGCATGTGTaGATCCAACATGTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: KESFPVFGLRSAASLFNVFRLHV*IQHVPS
Trigger: AGAAGGAACATGTTGGATTCACACATGCAACCTGAA...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR TCA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTATTCAGGTTGCATGTGTaGATCCAACATGTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: FVESLIPTDLSLNAACGVFRLHV*IQHVPS
Trigger: AGAAGGAACATGTTGGATTCACACATGCAACCTGAA...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR GCA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTCTTCACTTTCAGGTTaGATGTGTGAATCCAACATG +
Preference number: 2 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMSSLSG*MCESNM
Trigger: CATGTTGGATTCACACATGCAACCTGAAAGTGAAGA...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR GCA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTACAACTGCGTTTTACTTaGTACCTTATTGCACACCTC +
Preference number: 2 (lower is better)
Translates to: FVESLIPTDLSLNAACGVQLRFT*YLIAHL
Trigger: GAGGTGTGCAATAAGGTAGCAAGTAAAACGCAGTTG...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CCA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGCAAGCGTTCCTTCAGTaGTGTTTGTGTGGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: HSKGREAHLINIMFPTPLQAFLQ*CLCGLS
Trigger: AGACAGACCACACAAACACCACTGAAGGAACGCTTG...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACAAATACTGAGCCCCAATaGCAGGGATGGCTACTGTAC +
Preference number: 2 (lower is better)
Translates to: QVHSKGREAHLINIMFPTNTEPQ*QGWLLY
Trigger: GTACAGTAGCCATCCCTGCCATTGGGGCTCAGTATT...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR GCA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATGTTTGGACTCAGAAGTaGGGCAAGTCTTTTCAATGT +
Preference number: 2 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHVWTQK*GKSFQC
Trigger: ACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAAC...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGGAGCTGCTGGAAACATaGAATACTGAGCCCCAATGG +
Preference number: 2 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKELLET*NTEPQW
Trigger: CCATTGGGGCTCAGTATTCCATGTTTCCAGCAGCTC...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR TCA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGTTCAGGTTGCATGTGTaGATCCAACATGTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: HSKGREAHLINIMFPTPLFRLHV*IQHVPS
Trigger: AGAAGGAACATGTTGGATTCACACATGCAACCTGAA...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR TCA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTATCAACAAAAATCCCGTaGGTGGAAAATTGTATGGAT +
Preference number: 2 (lower is better)
Translates to: FVESLIPTDLSLNAACGVSTKIP*VENCMD
Trigger: ATCCATACAATTTTCCACTCACGGGATTTTTGTTGA...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTaGTGTTTGTGTGGTCTGTCT +
Preference number: 2 (lower is better)
Translates to: LHFQVACVNPTCSFFINSQAFLQ*CLCGLS
Trigger: AGACAGACCACACAAACACCACTGAAGGAACGCTTG...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
3UTR CAA 90 bp AAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTaGAGGACCATGGACAGTTTTGCAAGAAACATGGTAAGGCAACTA +
Preference number: 2 (lower is better)
Translates to: KGREAHLINIMFPTP*RTMDSFARNMVRQL
Trigger: TAGTTGCCTTACCATGTTTCTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR TCA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTTATGGATCTCTAACATaGCATAAAAACGCAACTGCG +
Preference number: 2 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVYGSLT*HKNATA
Trigger: CGCAGTTGCGTTTTTATGTCATGTTAGAGATCCATA...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
3UTR-3UTR TCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACATACTTGCTAAGGGCATaGTCCTCTTATGAATCCACA +
Preference number: 2 (lower is better)
Translates to: QVHSKGREAHLINIMFPTYLLRA*SSYEST
Trigger: TGTGGATTCATAAGAGGATCATGCCCTTAGCAAGTA...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR TCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGTTTCCTTTCCCTTCATaGTATCGGCTATATATACCA +
Preference number: 2 (lower is better)
Translates to: ARTIASLLEMYERRHAKLFPFPS*YRLYIP
Trigger: TGGTATATATAGCCGATATCATGAAGGGAAAGGAAA...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR GCA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTGAAGGCACGAACCATTaGAAGTCTTTTGGAAATGTA +
Preference number: 2 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVEGTNH*KSFGNV
Trigger: TACATTTCCAAAAGACTTGCAATGGTTCGTGCCTTC...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
3UTR-3UTR GCA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCAGAAGGCACGAACCATTaGAAGTCTTTTGGAAATGTA +
Preference number: 2 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSEGTNH*KSFGNV
Trigger: TACATTTCCAAAAGACTTGCAATGGTTCGTGCCTTC...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CCA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCACCATTGCAAGTCTTTTaGAAATGTATGAACGTAGGC +
Preference number: 2 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSPLQVF*KCMNVG
Trigger: GCCTACGTTCATACATTTCCAAAAGACTTGCAATGG...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR GCA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGTGCAAAGGTGTCTTATaGAACTCGATTAAAACCTTG +
Preference number: 2 (lower is better)
Translates to: HSKGREAHLINIMFPTPLCKGVL*NSIKTL
Trigger: CAAGGTTTTAATCGAGTTGCATAAGACACCTTTGCA...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGAGTCTTAATTGCAGGTaGCTACACCTTTGCTCTTTA +
Preference number: 2 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKSLNCR*LHLCSL
Trigger: TAAAGAGCAAAGGTGTAGCCACCTGCAATTAAGACT...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR GCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTCTTCACTTTCAGGTTaGATGTGTGAATCCAACATG +
Preference number: 2 (lower is better)
Translates to: IASLLEMYERRHAKLKIVSSLSG*MCESNM
Trigger: CATGTTGGATTCACACATGCAACCTGAAAGTGAAGA...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
3UTR GCA 72 bp GTAGGAACCCCTAGGCCCTGGGGCTCTGTTGCCAGCTaGACCTCGCCCTCGGCCTCTTATGCTGCCTGCTTG +
Preference number: 3 (lower is better)
Translates to: VGTPRPWGSVAS*TSPSASYAACL
Trigger: CAAGCAGGCAGCATAAGAGGCCGAGGGCGAGGTGCAGCTGGCAACAGAGCCCCAGGGCCTAGGGGTTCCTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR GCA 72 bp AATGGCAGCAGCAGGGAAGGCCTGAGGTATGTAGCCTaGGTATCCTCCATACATGGCGGCCGCGGCTGCCGC +
Preference number: 3 (lower is better)
Translates to: NGSSREGLRYVA*VSSIHGGRGCR
Trigger: GCGGCAGCCGCGGCCGCCATGTATGGAGGATACGCAGGCTACATACCTCAGGCCTTCCCTGCTGCTGCCATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR CCA 72 bp AGGCCTGAGGTATGTAGCCTGCGTATCCTCCATACATaGCGGCCGCGGCTGCCGCGTTCTTCTGTAGTGTGG +
Preference number: 3 (lower is better)
Translates to: RPEVCSLRILHT*RPRLPRSSVVW
Trigger: CCACACTACAGAAGAACGCGGCAGCCGCGGCCGCCATGTATGGAGGATACGCAGGCTACATACCTCAGGCCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR TCA 72 bp AGTGGGGGCATGTTTAAGGCTAAGGCACATGGAGAATaGGCCCCGGCTAACGGTGGCAAAGGAGAGCTTTCC +
Preference number: 3 (lower is better)
Translates to: SGGMFKAKAHGE*APANGGKGELS
Trigger: GGAAAGCTCTCCTTTGCCACCGTTAGCCGGGGCTCATTCTCCATGTGCCTTAGCCTTAAACATGCCCCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR GCA 72 bp GAGGCAGACCTCAGCCCTCGGTTCTCGGCATTTAACTaGCCCAGTCTTAATTGCAGGTGGCTACACCTTTGC +
Preference number: 3 (lower is better)
Translates to: EADLSPRFSAFN*PSLNCRWLHLC
Trigger: GCAAAGGTGTAGCCACCTGCAATTAAGACTGGGGCAGTTAAATGCCGAGAACCGAGGGCTGAGGTCTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR CCA 72 bp CCCGTAGATCCCGGCAGTAGGAATTCTCTGAACGTTTaGAGCCACCGTGTATACTGGAGTTATTGGGCGGCC +
Preference number: 3 (lower is better)
Translates to: PVDPGSRNSLNV*SHRVYWSYWAA
Trigger: GGCCGCCCAATAACTCCAGTATACACGGTGGCTCCAAACGTTCAGAGAATTCCTACTGCCGGGATCTACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR GCA 72 bp GCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTaGTGGTCACCAGCCTCAGTATGTCTGGTAGACGTC +
Preference number: 3 (lower is better)
Translates to: AFLQWCLCGLSS*WSPASVCLVDV
Trigger: GACGTCTACCAGACATACTGAGGCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR CCA 72 bp AGGAATTCTCTGAACGTTTGGAGCCACCGTGTATACTaGAGTTATTGGGCGGCCCTGGAAAGGTGGTGGCGT +
Preference number: 3 (lower is better)
Translates to: RNSLNVWSHRVY*SYWAALERWWR
Trigger: ACGCCACCACCTTTCCAGGGCCGCCCAATAACTCCAGTATACACGGTGGCTCCAAACGTTCAGAGAATTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR CCA 72 bp TTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTaGTCACCAGCCTCAGTATGTCTGGTAGACGTCGGG +
Preference number: 3 (lower is better)
Translates to: FLQWCLCGLSSC*SPASVCLVDVG
Trigger: CCCGACGTCTACCAGACATACTGAGGCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR CCA 72 bp GGCAGGGATGGCTACTGTACCAGGTTTAATGGCAACTaGGTTGACGGTAGGGATTTCCAAATTCGGCACCAG +
Preference number: 3 (lower is better)
Translates to: GRDGYCTRFNGN*VDGRDFQIRHQ
Trigger: CTGGTGCCGAATTTGGAAATCCCTACCGTCAACCCAGTTGCCATTAAACCTGGTACAGTAGCCATCCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR GCA 72 bp TGTTGCCAGCTGCACCTCGCCCTCGGCCTCTTATGCTaGCTGCTTGTAATAACAACACAAAAGATGATCAGC +
Preference number: 3 (lower is better)
Translates to: CCQLHLALGLLC*LLVITTQKMIS
Trigger: GCTGATCATCTTTTGTGTTGTTATTACAAGCAGGCAGCATAAGAGGCCGAGGGCGAGGTGCAGCTGGCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR GCA 72 bp CTCTGTTGCCAGCTGCACCTCGCCCTCGGCCTCTTATaGTGCCTGCTTGTAATAACAACACAAAAGATGATC +
Preference number: 3 (lower is better)
Translates to: LCCQLHLALGLL*CLLVITTQKMI
Trigger: GATCATCTTTTGTGTTGTTATTACAAGCAGGCAGCATAAGAGGCCGAGGGCGAGGTGCAGCTGGCAACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR GCA 72 bp CCTCGGTTCTCGGCATTTAACTGCCCCAGTCTTAATTaGAGGTGGCTACACCTTTGCTCTTTAATAGGCTGG +
Preference number: 3 (lower is better)
Translates to: PRFSAFNCPSLN*RWLHLCSLIGW
Trigger: CCAGCCTATTAAAGAGCAAAGGTGTAGCCACCTGCAATTAAGACTGGGGCAGTTAAATGCCGAGAACCGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR CAA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATAACATTGCGGTGGGATaGGGAATCTGGGGAGGAGGG +
Preference number: 3 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHNIAVG*GIWGGG
Trigger: CCCTCCTCCCCAGATTCCCAATCCCACCGCAATGTT...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CAA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTTTCCTTCAGTGGTGTTaGTGTGGTCTGTCTTCGTGC +
Preference number: 3 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLAFLQWC*CGLSSC
Trigger: GCACGAAGACAGACCACACAAACACCACTGAAGGAA...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CAA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGATGTTTCCAACACCCTaGAGGACCATGGACAGTTTT +
Preference number: 3 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVMFPTP*RTMDSF
Trigger: AAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACAT...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR GCA 72 bp GGCAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTaGGGCAAGTCTTTTCAATGTTGGCTTAAGGAGAGA +
Preference number: 3 (lower is better)
Translates to: GKGELSSVWTQK*GKSFQCWLKER
Trigger: TCTCTCCTTAAGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CAA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGAACATTGCGGTGGGATaGGGAATCTGGGGAGGAGGG +
Preference number: 3 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKNIAVG*GIWGGG
Trigger: CCCTCCTCCCCAGATTCCCAATCCCACCGCAATGTT...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CAA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGTTATCAGTCCTAGGCTaGCCAAACATTGCGGTGGGA +
Preference number: 3 (lower is better)
Translates to: ARTIASLLEMYERRHAKLLSVLG*PNIAVG
Trigger: TCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAA...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CAA 90 bp GGAACAGATAAGTCCCAGATAGGAGGCTCACTGATACTTAATTGGCCATGTCACGAGTCTCTGGGGGTCTaGTCTACGATAACATACATT +
Preference number: 3 (lower is better)
Translates to: GTDKSQIGGSLILNWPCHESLGV*STITYI
Trigger: AATGTATGTTATCGTAGACAAGACCCCCAGAGACTC...GTGACATGGCCAATTAAGTATCAGTGAGCCTCCTATCTGGGACTTATCTGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
3UTR GCA 72 bp TGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATaGAGCTTGTGGGGTACATCATCAGGAACATTGCAC +
Preference number: 3 (lower is better)
Translates to: CRVTHSHRFEFE*SLWGTSSGTLH
Trigger: GTGCAATGTTCCTGATGATGTACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR CCA 72 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTaGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCA +
Preference number: 3 (lower is better)
Translates to: CSFFINSQAFLQ*CLCGLSSCWSP
Trigger: TGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
3UTR-3UTR CAA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTTTCCTTCAGTGGTGTTaGTGTGGTCTGTCTTCGTGC +
Preference number: 3 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVFLQWC*CGLSSC
Trigger: GCACGAAGACAGACCACACAAACACCACTGAAGGAA...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
3UTR-3UTR CAA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCATTCCTTCAGTGGTGTTaGTGTGGTCTGTCTTCGTGC +
Preference number: 3 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSFLQWC*CGLSSC
Trigger: GCACGAAGACAGACCACACAAACACCACTGAAGGAA...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CAA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGTCCACTGTGTGGATTTaGCCATCTTCAATCATTTTA +
Preference number: 3 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVSTVWI*PSSIIL
Trigger: TAAAATGATTGAAGATGGCAAAATCCACACAGTGGA...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR CAA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACATGTATACTGGAGTTATaGGGCGGCCCTGGAAAGGTG +
Preference number: 3 (lower is better)
Translates to: QVHSKGREAHLINIMFPTCILEL*GGPGKV
Trigger: CACCTTTCCAGGGCCGCCCAATAACTCCAGTATACA...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
3UTR-3UTR CAA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGACCATTGCAAGTCTTTaGGAAATGTATGAACGTAGG +
Preference number: 3 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMTIASL*EMYERR
Trigger: CCTACGTTCATACATTTCCAAAAGACTTGCAATGGT...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CAA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTCCCACAGATTTGAGTTaGAATGCAGCTTGTGGGGTA +
Preference number: 3 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVPTDLS*NAACGV
Trigger: TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGG...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
3UTR-3UTR CAA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATTCCTTCAGTGGTGTTaGTGTGGTCTGTCTTCGTGC +
Preference number: 3 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKFLQWC*CGLSSC
Trigger: GCACGAAGACAGACCACACAAACACCACTGAAGGAA...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
3UTR-3UTR CAA 90 bp AAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGACCATTGCAAGTCTTTaGGAAATGTATGAACGTAGG +
Preference number: 3 (lower is better)
Translates to: KYKSHQLLYQSYLSVLGLTIASL*EMYERR
Trigger: CCTACGTTCATACATTTCCAAAAGACTTGCAATGGT...CAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTGGTGGCTTTTATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CAA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTAACCATTGCAAGTCTTTaGGAAATGTATGAACGTAGG +
Preference number: 3 (lower is better)
Translates to: FVESLIPTDLSLNAACGVTIASL*EMYERR
Trigger: CCTACGTTCATACATTTCCAAAAGACTTGCAATGGT...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CAA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTATGTTTCCAACACCCTaGAGGACCATGGACAGTTTT +
Preference number: 3 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVMFPTP*RTMDSF
Trigger: AAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACAT...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
3UTR-3UTR CAA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGGCAACTGCGTTTTACTaGCTACCTTATTGCACACCT +
Preference number: 3 (lower is better)
Translates to: HSKGREAHLINIMFPTPLATAFY*LPYCTP
Trigger: AGGTGTGCAATAAGGTAGCAAGTAAAACGCAGTTGC...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CAA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACAGAGTTTGAATGCAGCTaGTGGGGTACATCATCAGGA +
Preference number: 3 (lower is better)
Translates to: QVHSKGREAHLINIMFPTEFECS*WGTSSG
Trigger: TCCTGATGATGTACCCCACAAGCTGCATTCAAACTC...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CAA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTATTCCTTCAGTGGTGTTaGTGTGGTCTGTCTTCGTGC +
Preference number: 3 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLFLQWC*CGLSSC
Trigger: GCACGAAGACAGACCACACAAACACCACTGAAGGAA...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
3UTR-3UTR CAA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGGAGTCTCTGGGGGTCTaGTCTACGATAACATACATT +
Preference number: 3 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKESLGV*STITYI
Trigger: AATGTATGTTATCGTAGACAAGACCCCCAGAGACTC...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR CCA 72 bp ACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTaGGGTACATCATCAGGAACATTGCACAATTATTTT +
Preference number: 3 (lower is better)
Translates to: THSHRFEFECSL*GTSSGTLHNYF
Trigger: AAAATAATTGTGCAATGTTCCTGATGATGTACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
3UTR-3UTR CAA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGACCATTGCAAGTCTTTaGGAAATGTATGAACGTAGG +
Preference number: 3 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKTIASL*EMYERR
Trigger: CCTACGTTCATACATTTCCAAAAGACTTGCAATGGT...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp CCATACATGGCGGCCGCGGCTGCCGCGTTCTTCTGTAGTGTGGCGATCGTGGCTCATCAGCGCCAGCAGTaGTGCCTCGTTGGGCGCGCC +
Preference number: 4 (lower is better)
Translates to: PYMAAAAAAFFCSVAIVAHQRQQ*CLVGRA
Trigger: GGCGCGCCCAACGAGGCAGCACTGCTGGCGCTGATG...AGCCACGATCGCCACACTACAGAAGAACGCGGCAGCCGCGGCCGCCATGTATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR GCA 90 bp TGGAGTTATTGGGCGGCCCTGGAAAGGTGGTGGCGTCGACACAGTGGGAATGACCAGCGCCAGCAGTGCTaGCTCGTTGGGCGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: WSYWAALERWWRRHSGNDQRQQC*LVGRAR
Trigger: GCGGGCGCGCCCAACGAGGCAGCACTGCTGGCGCTG...GTCATTCCCACTGTGTCGACGCCACCACCTTTCCAGGGCCGCCCAATAACTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR TCA 90 bp ACCAGCCTCAGTATGTCTGGTAGACGTCGGGGATGGGGACCTGAATGGCAGCAGGGATGCGGCCAGGCATaGGCTTGCGGCGAGCCATGG +
Preference number: 4 (lower is better)
Translates to: TSLSMSGRRRGWGPEWQQGCGQA*ACGEPW
Trigger: CCATGGCTCGCCGCAAGCTCATGCCTGGCCGCATCC...CTGCTGCCATTCAGGTCCCCATCCCCGACGTCTACCAGACATACTGAGGCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR GCA 90 bp CCATACATGGCGGCCGCGGCTGCCGCGTTCTTCTGTAGTGTGGCGATCGTGGCTGCGCGCTTGGCCTCGTaGTTGTGGCAGTACATGACG +
Preference number: 4 (lower is better)
Translates to: PYMAAAAAAFFCSVAIVAARLAS*LWQYMT
Trigger: CGTCATGTACTGCCACAAGCACGAGGCCAAGCGCGC...AGCCACGATCGCCACACTACAGAAGAACGCGGCAGCCGCGGCCGCCATGTATGG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR GCA 90 bp TGGAGTTATTGGGCGGCCCTGGAAAGGTGGTGGCGTCGACACAGTGGGAATGACGGCTCTGTTGCCAGCTaGACCTCGCCCTCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: WSYWAALERWWRRHSGNDGSVAS*TSPSAS
Trigger: AGAGGCCGAGGGCGAGGTGCAGCTGGCAACAGAGCC...GTCATTCCCACTGTGTCGACGCCACCACCTTTCCAGGGCCGCCCAATAACTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CCA 90 bp TGGAGTTATTGGGCGGCCCTGGAAAGGTGGTGGCGTCGACACAGTGGGAATGACTCCACGGCGATCTGGTaGCCCCACAGCTGGATGCGG +
Preference number: 4 (lower is better)
Translates to: WSYWAALERWWRRHSGNDSTAIW*PHSWMR
Trigger: CCGCATCCAGCTGTGGGGCCACCAGATCGCCGTGGA...GTCATTCCCACTGTGTCGACGCCACCACCTTTCCAGGGCCGCCCAATAACTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR TCA 90 bp TGGAGTTATTGGGCGGCCCTGGAAAGGTGGTGGCGTCGACACAGTGGGAATGACCCACGCAGCCGGGGTTaGACTGGCCGAAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: WSYWAALERWWRRHSGNDPRSRG*TGRSSS
Trigger: AGAAGAGCTTCGGCCAGTTCAACCCCGGCTGCGTGG...GTCATTCCCACTGTGTCGACGCCACCACCTTTCCAGGGCCGCCCAATAACTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR TCA 90 bp CAGCTGCACCTCGCCCTCGGCCTCTTATGCTGCCTGCTTGTAATAACAACACAACGGGCTTGGCCAGCGTaGCCTCCAGGCACGAGCCCT +
Preference number: 4 (lower is better)
Translates to: QLHLALGLLCCLLVITTQRAWPA*PPGTSP
Trigger: AGGGCTCGTGCCTGGAGGTCACGCTGGCCAAGCCCG...TTGTGTTGTTATTACAAGCAGGCAGCATAAGAGGCCGAGGGCGAGGTGCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR TCA 90 bp GTGTGGTCTGTCTTCGTGCTGGTCACCAGCCTCAGTATGTCTGGTAGACGTCGGTCGACACAGTGGGAATaGCAGCGGCTGCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: VWSVFVLVTSLSMSGRRRSTQWE*QRLRRL
Trigger: CAGCCGCCGCAGCCGCTGTCATTCCCACTGTGTCGA...CCGACGTCTACCAGACATACTGAGGCTGGTGACCAGCACGAAGACAGACCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCGCTTGCGGCGAGCCATaGCAGCCGCGCGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSACGEP*QPRGGS
Trigger: AGAGCCACCGCGCGGCTGCCATGGCTCGCCGCAAGC...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp GTGTGGTCTGTCTTCGTGCTGGTCACCAGCCTCAGTATGTCTGGTAGACGTCGGTGGTGGCCCCACAGCTaGATGCGGCCAGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: VWSVFVLVTSLSMSGRRRWWPHS*MRPGMS
Trigger: GCTCATGCCTGGCCGCATCCAGCTGTGGGGCCACCA...CCGACGTCTACCAGACATACTGAGGCTGGTGACCAGCACGAAGACAGACCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR TCA 90 bp AGCTGGAGCAGCAAATGGCACGTAACTGGCCCCGTAGATCCCGGCAGTAGGAATCCCTGTTGGGCCCAATaGGCGCGTTGTAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: SWSSKWHVTGPVDPGSRNPCWAQ*ARCRGS
Trigger: GCTACCCCTACAACGCGCTCATTGGGCCCAACAGGG...ATTCCTACTGCCGGGATCTACGGGGCCAGTTACGTGCCATTTGCTGCTCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR GCA 90 bp GTGTGGTCTGTCTTCGTGCTGGTCACCAGCCTCAGTATGTCTGGTAGACGTCGGGTGGGCCGCCGTACTTaGGCTGCCCGTTCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: VWSVFVLVTSLSMSGRRRVGRRT*AARSLA
Trigger: TGCAAGAGAACGGGCAGCGCAAGTACGGCGGCCCAC...CCGACGTCTACCAGACATACTGAGGCTGGTGACCAGCACGAAGACAGACCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR GCA 90 bp TGGAGTTATTGGGCGGCCCTGGAAAGGTGGTGGCGTCGACACAGTGGGAATGACCTGGCTGGGTCTGGCTaGACAGCAATGGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: WSYWAALERWWRRHSGNDLAGSG*TAMGLI
Trigger: GATCAGCCCCATTGCTGTGCAGCCAGACCCAGCCAG...GTCATTCCCACTGTGTCGACGCCACCACCTTTCCAGGGCCGCCCAATAACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CCA 90 bp ACCAGCCTCAGTATGTCTGGTAGACGTCGGGGATGGGGACCTGAATGGCAGCAGCTGCACATTCCACAGTaGAAAGCGGGAGCGGCGACC +
Preference number: 4 (lower is better)
Translates to: TSLSMSGRRRGWGPEWQQLHIPQ*KAGAAT
Trigger: GGTCGCCGCTCCCGCTTTCCACTGTGGAATGTGCAG...CTGCTGCCATTCAGGTCCCCATCCCCGACGTCTACCAGACATACTGAGGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CCA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGCTCCCAGCCGGGCGGTaGGCCGCCGTACTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVLPAGR*AAVLAL
Trigger: CAGCGCAAGTACGGCGGCCCACCGCCCGGCTGGGAG...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp ACCAGCCTCAGTATGTCTGGTAGACGTCGGGGATGGGGACCTGAATGGCAGCAGTCTTGTCGGCCGCGCTaGCGTAGACGATCACGTCCA +
Preference number: 4 (lower is better)
Translates to: TSLSMSGRRRGWGPEWQQSCRPR*RRRSRP
Trigger: TGGACGTGATCGTCTACGCCAGCGCGGCCGACAAGA...CTGCTGCCATTCAGGTCCCCATCCCCGACGTCTACCAGACATACTGAGGCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR GCA 90 bp TGGAGTTATTGGGCGGCCCTGGAAAGGTGGTGGCGTCGACACAGTGGGAATGACCGTTCTCTTGCACCATaGTGTAGCCCGTGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: WSYWAALERWWRRHSGNDRSLAP*CSPCAP
Trigger: TGGAGCGCACGGGCTACAGCATGGTGCAAGAGAACG...GTCATTCCCACTGTGTCGACGCCACCACCTTTCCAGGGCCGCCCAATAACTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR GCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCCGTCGCGCGGGATCTTaGCCACGAAGACCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSRRAGS*PRRPRS
Trigger: GCTGCGAGGTCTTCGTGGGCAAGATCCCGCGCGACG...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp CAGCTGCACCTCGCCCTCGGCCTCTTATGCTGCCTGCTTGTAATAACAACACAAGGCGCAGCTCGTAGATaGGGCCCACGGCCTCGAACA +
Preference number: 4 (lower is better)
Translates to: QLHLALGLLCCLLVITTQGAARR*GPRPRT
Trigger: TGTTCGAGGCCGTGGGCCGCATCTACGAGCTGCGCC...TTGTGTTGTTATTACAAGCAGGCAGCATAAGAGGCCGAGGGCGAGGTGCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR GCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCGGCAGTTGTCCACGCTaGAGCACACGCCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSGSCPR*STRRAG
Trigger: GCCTGCTCGGCGTGTGCTGCAGCGTGGACAACTGCC...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCTCCACGGCGATCTGGTaGCCCCACAGCTGGATGCGG +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSSTAIW*PHSWMR
Trigger: CCGCATCCAGCTGTGGGGCCACCAGATCGCCGTGGA...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCGGAACCCCTAGGCCCTaGGGCTCTGTTGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSGTPRP*GSVASC
Trigger: GCAGCTGGCAACAGAGCCCCAGGGCCTAGGGGTTCC...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCCCAGCACGCCCTCGGTaGCCTTGGCAATCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSPARPR*PWQSPP
Trigger: TGGAGGAGATTGCCAAGGTCACCGAGGGCGTGCTGG...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATGCGGCCAGGCATaGGCTTGCGGCGAGCCATGG +
Preference number: 4 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVGCGQA*ACGEPW
Trigger: CCATGGCTCGCCGCAAGCTCATGCCTGGCCGCATCC...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCCGGCGGCCGAGTCACTaGTCATGGCTGCGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSRRPSH*SWLRWN
Trigger: ATTCCACCGCAGCCATGAGCAGTGACTCGGCCGCCG...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCGTGGGCCGCCGTACTTaGGCTGCCCGTTCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSVGRRT*AARSLA
Trigger: TGCAAGAGAACGGGCAGCGCAAGTACGGCGGCCCAC...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTACCTCGCAGCCACGCTaGGGGTGCGGGCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLATSQPR*GCGPSQ
Trigger: CTGGGAGGGCCCGCACCCGCAGCGTGGCTGCGAGGT...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GTGTGGTCTGTCTTCGTGCTGGTCACCAGCCTCAGTATGTCTGGTAGACGTCGGCCGAGTCACTGCTCATaGCTGCGGTGGAATCCTCTG +
Preference number: 4 (lower is better)
Translates to: VWSVFVLVTSLSMSGRRRPSHCS*LRWNPL
Trigger: CAGAGGATTCCACCGCAGCCATGAGCAGTGACTCGG...CCGACGTCTACCAGACATACTGAGGCTGGTGACCAGCACGAAGACAGACCACAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTCTCCCAGCCGGGCGGTaGGCCGCCGTACTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLALPAGR*AAVLAL
Trigger: CAGCGCAAGTACGGCGGCCCACCGCCCGGCTGGGAG...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGCTCCCAGCCGGGCGGTaGGCCGCCGTACTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMLPAGR*AAVLAL
Trigger: CAGCGCAAGTACGGCGGCCCACCGCCCGGCTGGGAG...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CAGCTGCACCTCGCCCTCGGCCTCTTATGCTGCCTGCTTGTAATAACAACACAACAGTCCACGGCGATCTaGTGGCCCCACAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: QLHLALGLLCCLLVITTQQSTAI*WPHSWM
Trigger: CATCCAGCTGTGGGGCCACCAGATCGCCGTGGACTG...TTGTGTTGTTATTACAAGCAGGCAGCATAAGAGGCCGAGGGCGAGGTGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR TCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCGCTTGTGGCAGTACATaGCGAAGGCGTAGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSACGST*RRRSRG
Trigger: ACCGCGGCTACGCCTTCGTCATGTACTGCCACAAGC...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGTCGACACAGTGGGAATaGCAGCGGCTGCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVSTQWE*QRLRRL
Trigger: CAGCCGCCGCAGCCGCTGTCATTCCCACTGTGTCGA...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTCAGCGCCAGCAGTGCTaGCTCGTTGGGCGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: KESFPVFGLRSAASLFNVQRQQC*LVGRAR
Trigger: GCGGGCGCGCCCAACGAGGCAGCACTGCTGGCGCTG...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTCTCCCAGCCGGGCGGTaGGCCGCCGTACTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: KESFPVFGLRSAASLFNVLPAGR*AAVLAL
Trigger: CAGCGCAAGTACGGCGGCCCACCGCCCGGCTGGGAG...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCGGTAGACGTCGGGGATaGGGACCTGAATGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSGRRRG*GPEWQQ
Trigger: CTGCTGCCATTCAGGTCCCCATCCCCGACGTCTACC...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp CAGCTGCACCTCGCCCTCGGCCTCTTATGCTGCCTGCTTGTAATAACAACACAAGTGGGATTGGGAATCTaGGGAGGAGGGGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: QLHLALGLLCCLLVITTQVGLGI*GGGDRV
Trigger: CACCCTGTCCCCTCCTCCCCAGATTCCCAATCCCAC...TTGTGTTGTTATTACAAGCAGGCAGCATAAGAGGCCGAGGGCGAGGTGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR TCA 90 bp CAGCTGCACCTCGCCCTCGGCCTCTTATGCTGCCTGCTTGTAATAACAACACAACGGTGGTCTCGATCATaGGGTTGCGCACGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: QLHLALGLLCCLLVITTQRWSRS*GCARRG
Trigger: TCCTCTACGTGCGCAACCTCATGATCGAGACCACCG...TTGTGTTGTTATTACAAGCAGGCAGCATAAGAGGCCGAGGGCGAGGTGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR TCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGAAGTCGCGGATCTTCTTaGCGCGCTCCACGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGSRGSS*RAPRSR
Trigger: CCGGCTGCGTGGAGCGCGTCAAGAAGATCCGCGACT...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTACGGGCTTGGCCAGCGTaGCCTCCAGGCACGAGCCCT +
Preference number: 4 (lower is better)
Translates to: FVESLIPTDLSLNAACGVRAWPA*PPGTSP
Trigger: AGGGCTCGTGCCTGGAGGTCACGCTGGCCAAGCCCG...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTCAGCGCCAGCAGTGCTaGCTCGTTGGGCGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRQRQQC*LVGRAR
Trigger: GCGGGCGCGCCCAACGAGGCAGCACTGCTGGCGCTG...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACCATCAGCGCCAGCAGTaGTGCCTCGTTGGGCGCGCC +
Preference number: 4 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHHQRQQ*CLVGRA
Trigger: GGCGCGCCCAACGAGGCAGCACTGCTGGCGCTGATG...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTCATCAGCGCCAGCAGTaGTGCCTCGTTGGGCGCGCC +
Preference number: 4 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLAHQRQQ*CLVGRA
Trigger: GGCGCGCCCAACGAGGCAGCACTGCTGGCGCTGATG...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTACCTCGCAGCCACGCTaGGGGTGCGGGCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRTSQPR*GCGPSQ
Trigger: CTGGGAGGGCCCGCACCCGCAGCGTGGCTGCGAGGT...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGACCTCGCAGCCACGCTaGGGGTGCGGGCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLTSQPR*GCGPSQ
Trigger: CTGGGAGGGCCCGCACCCGCAGCGTGGCTGCGAGGT...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp GTGTGGTCTGTCTTCGTGCTGGTCACCAGCCTCAGTATGTCTGGTAGACGTCGGTGTGGTCTGTCTTCGTaGTGGTCACCAGCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: VWSVFVLVTSLSMSGRRRCGLSS*WSPASV
Trigger: TACTGAGGCTGGTGACCAGCACGAAGACAGACCACA...CCGACGTCTACCAGACATACTGAGGCTGGTGACCAGCACGAAGACAGACCACAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGCTCCCAGCCGGGCGGTaGGCCGCCGTACTTGCGCTG +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLLPAGR*AAVLAL
Trigger: CAGCGCAAGTACGGCGGCCCACCGCCCGGCTGGGAG...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGCTTGCGGCGAGCCATaGCAGCCGCGCGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: KESFPVFGLRSAASLFNVACGEP*QPRGGS
Trigger: AGAGCCACCGCGCGGCTGCCATGGCTCGCCGCAAGC...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGATCCACGGCGATCTGGTaGCCCCACAGCTGGATGCGG +
Preference number: 4 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGSTAIW*PHSWMR
Trigger: CCGCATCCAGCTGTGGGGCCACCAGATCGCCGTGGA...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCGCCCTGGAAAGGTGGTaGCGTCGACACAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSALERW*RRHSGN
Trigger: ATTCCCACTGTGTCGACGCCACCACCTTTCCAGGGC...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCCAAATGGCACGTAACTaGCCCCGTAGATCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSQMARN*PRRSRQ
Trigger: CTGCCGGGATCTACGGGGCCAGTTACGTGCCATTTG...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp GTGTGGTCTGTCTTCGTGCTGGTCACCAGCCTCAGTATGTCTGGTAGACGTCGGGGTCTGTCTTCGTGCTaGTCACCAGCCTCAGTATGT +
Preference number: 4 (lower is better)
Translates to: VWSVFVLVTSLSMSGRRRGLSSC*SPASVC
Trigger: ACATACTGAGGCTGGTGACCAGCACGAAGACAGACC...CCGACGTCTACCAGACATACTGAGGCTGGTGACCAGCACGAAGACAGACCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR TCA 90 bp AGCTGCTGGAAACATGGAATACTGAGCCCCAATGGCAGGGATGGCTACTGTACCCCAGCTCAGTGCCGTTaGGGTTGTTCATGGCATGCA +
Preference number: 4 (lower is better)
Translates to: SCWKHGILSPNGRDGYCTPAQCR*GCSWHA
Trigger: TGCATGCCATGAACAACCTCAACGGCACTGAGCTGG...GGTACAGTAGCCATCCCTGCCATTGGGGCTCAGTATTCCATGTTTCCAGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR TCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGCGGGCTTGGCCAGCGTaGCCTCCAGGCACGAGCCCT +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLRAWPA*PPGTSP
Trigger: AGGGCTCGTGCCTGGAGGTCACGCTGGCCAAGCCCG...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGCCCTGGGGCTCTGTTaGCAGCTGCACCTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: KESFPVFGLRSAASLFNVALGLC*QLHLAL
Trigger: GAGGGCGAGGTGCAGCTGGCAACAGAGCCCCAGGGC...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
CDS-3UTR GCA 90 bp TGGAGTTATTGGGCGGCCCTGGAAAGGTGGTGGCGTCGACACAGTGGGAATGACTTTAGGGGCTGGAGCTaGTGGAAACATGGAATACTG +
Preference number: 4 (lower is better)
Translates to: WSYWAALERWWRRHSGNDFRGWS*WKHGIL
Trigger: CAGTATTCCATGTTTCCAGCAGCTCCAGCCCCTAAA...GTCATTCCCACTGTGTCGACGCCACCACCTTTCCAGGGCCGCCCAATAACTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGACACGCACTGCGCGCTTaGCCTCGTGCTTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGHALRA*PRACGS
Trigger: ACTGCCACAAGCACGAGGCCAAGCGCGCAGTGCGTG...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGTCTTGTCGGCCGCGCTaGCGTAGACGATCACGTCCA +
Preference number: 4 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVSCRPR*RRRSRP
Trigger: TGGACGTGATCGTCTACGCCAGCGCGGCCGACAAGA...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTGCTTGCGGCGAGCCATaGCAGCCGCGCGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRACGEP*QPRGGS
Trigger: AGAGCCACCGCGCGGCTGCCATGGCTCGCCGCAAGC...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACCGTATCCTCCATACATaGCGGCCGCGGCTGCCGCGT +
Preference number: 4 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHRILHT*RPRLPR
Trigger: ACGCGGCAGCCGCGGCCGCCATGTATGGAGGATACG...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GGAACAGATAAGTCCCAGATAGGAGGCTCACTGATACTTAATTGGCCATGTCACCGTATCCTCCATACATaGCGGCCGCGGCTGCCGCGT +
Preference number: 4 (lower is better)
Translates to: GTDKSQIGGSLILNWPCHRILHT*RPRLPR
Trigger: ACGCGGCAGCCGCGGCCGCCATGTATGGAGGATACG...GTGACATGGCCAATTAAGTATCAGTGAGCCTCCTATCTGGGACTTATCTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGAGCTGGGGCCGAGCATaGCTTGGCCGCGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLSWGRA*LGRAQA
Trigger: TGCCTGCGCGCGGCCAAGCCATGCTCGGCCCCAGCT...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514014.1
CDS-3UTR TCA 90 bp TTCATGATATCGGCTATATATACCACGACCAGCAGAATATCCCCCGAGGTAGGATGGGGATCCCGCCGATaGAGAGGCGGCAGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: FMISAIYTTTSRISPEVGWGSRR*RGGSCP
Trigger: TGGACAACTGCCGCCTCTTCATCGGCGGGATCCCCA...TCCTACCTCGGGGGATATTCTGCTGGTCGTGGTATATATAGCCGATATCATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR TCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGACATCCTCGCGGCTGGTaGAGTGCACGAAGGCGTAGT +
Preference number: 4 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGHPRGW*SARRRS
Trigger: ACTACGCCTTCGTGCACTTCACCAGCCGCGAGGATG...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTCCCTGTTGGGCCCAATaGGCGCGTTGTAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLAPCWAQ*ARCRGS
Trigger: GCTACCCCTACAACGCGCTCATTGGGCCCAACAGGG...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTATCGACACAGTGGGAATaGCAGCGGCTGCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: FVESLIPTDLSLNAACGVSTQWE*QRLRRL
Trigger: CAGCCGCCGCAGCCGCTGTCATTCCCACTGTGTCGA...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCGCAGTAGGAATTCTCTaGACGTTTGGAGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSAVGIL*TFGATV
Trigger: CACGGTGGCTCCAAACGTTCAGAGAATTCCTACTGC...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACTCGGGGATGGGGACCTaGATGGCAGCAGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHSGMGT*MAAAGK
Trigger: CTTCCCTGCTGCTGCCATTCAGGTCCCCATCCCCGA...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp ACCAGCCTCAGTATGTCTGGTAGACGTCGGGGATGGGGACCTGAATGGCAGCAGTTAACCTTGGAGACTTaGAGAGAGAAAGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TSLSMSGRRRGWGPEWQQLTLET*REKVSR
Trigger: CCTGGAGACTTTCTCTCTGCAAGTCTCCAAGGTTAA...CTGCTGCCATTCAGGTCCCCATCCCCGACGTCTACCAGACATACTGAGGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR GCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACAGCGCCAGCAGTGCTaGCTCGTTGGGCGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: QVHSKGREAHLINIMFPTQRQQC*LVGRAR
Trigger: GCGGGCGCGCCCAACGAGGCAGCACTGCTGGCGCTG...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACGTGGGCCGCCGTACTTaGGCTGCCCGTTCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHVGRRT*AARSLA
Trigger: TGCAAGAGAACGGGCAGCGCAAGTACGGCGGCCCAC...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp AAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGGGCAGTTGTCCACGCTaGAGCACACGCCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: KYKSHQLLYQSYLSVLGLGSCPR*STRRAG
Trigger: GCCTGCTCGGCGTGTGCTGCAGCGTGGACAACTGCC...CAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTGGTGGCTTTTATACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGGCCGCCGCCCCTGGCTaGCTTCTGGTAGCGCGAGTA +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLAAAPG*LLVARV
Trigger: TACTCGCGCTACCAGAAGGCAGCCAGGGGCGGCGGC...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTCTGTTGCCAGCTaGACCTCGCCCTCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KESFPVFGLRSAASLFNVGSVAS*TSPSAS
Trigger: AGAGGCCGAGGGCGAGGTGCAGCTGGCAACAGAGCC...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
CDS-3UTR GCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTGCCCTGGGGCTCTGTTaGCAGCTGCACCTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRALGLC*QLHLAL
Trigger: GAGGGCGAGGTGCAGCTGGCAACAGAGCCCCAGGGC...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
CDS-3UTR GCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCTCCTCCTCCTGGATGTaGACACCCCAATCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSSSSWM*TPQSSS
Trigger: TGAACTGGATTGGGGTGTGCACATCCAGGAGGAGGA...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTCACGCACTGCGCGCTTaGCCTCGTGCTTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLAHALRA*PRACGS
Trigger: ACTGCCACAAGCACGAGGCCAAGCGCGCAGTGCGTG...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTTCCACGGCGATCTGGTaGCCCCACAGCTGGATGCGG +
Preference number: 4 (lower is better)
Translates to: KESFPVFGLRSAASLFNVSTAIW*PHSWMR
Trigger: CCGCATCCAGCTGTGGGGCCACCAGATCGCCGTGGA...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GGAACAGATAAGTCCCAGATAGGAGGCTCACTGATACTTAATTGGCCATGTCACCAGTCCACGGCGATCTaGTGGCCCCACAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: GTDKSQIGGSLILNWPCHQSTAI*WPHSWM
Trigger: CATCCAGCTGTGGGGCCACCAGATCGCCGTGGACTG...GTGACATGGCCAATTAAGTATCAGTGAGCCTCCTATCTGGGACTTATCTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CCA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTAGGAACCCCTAGGCCCTaGGGCTCTGTTGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FVESLIPTDLSLNAACGVGTPRP*GSVASC
Trigger: GCAGCTGGCAACAGAGCCCCAGGGCCTAGGGGTTCC...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
CDS-3UTR CCA 90 bp ACCAGCCTCAGTATGTCTGGTAGACGTCGGGGATGGGGACCTGAATGGCAGCAGAGGTTTAATGGCAACTaGGTTGACGGTAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: TSLSMSGRRRGWGPEWQQRFNGN*VDGRDF
Trigger: GAAATCCCTACCGTCAACCCAGTTGCCATTAAACCT...CTGCTGCCATTCAGGTCCCCATCCCCGACGTCTACCAGACATACTGAGGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGCGGCGGCAGCAGCACTaGCTGGGTCTGGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLRRQQH*LGLAAQ
Trigger: CTGTGCAGCCAGACCCAGCCAGTGCTGCTGCCGCCG...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTGCTTGTGGCAGTACATaGCGAAGGCGTAGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLAACGST*RRRSRG
Trigger: ACCGCGGCTACGCCTTCGTCATGTACTGCCACAAGC...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp AAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAGCACGCCCTCGGTaGCCTTGGCAATCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KYKSHQLLYQSYLSVLGLPARPR*PWQSPP
Trigger: TGGAGGAGATTGCCAAGGTCACCGAGGGCGTGCTGG...CAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTGGTGGCTTTTATACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp AAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCACGCAGCCGGGGTTaGACTGGCCGAAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KYKSHQLLYQSYLSVLGLPRSRG*TGRSSS
Trigger: AGAAGAGCTTCGGCCAGTTCAACCCCGGCTGCGTGG...CAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTGGTGGCTTTTATACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTAGTCGCGGATCTTCTTaGCGCGCTCCACGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRSRGSS*RAPRSR
Trigger: CCGGCTGCGTGGAGCGCGTCAAGAAGATCCGCGACT...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAGTCGCGGATCTTCTTaGCGCGCTCCACGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLSRGSS*RAPRSR
Trigger: CCGGCTGCGTGGAGCGCGTCAAGAAGATCCGCGACT...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACGGGCTTGGCCAGCGTaGCCTCCAGGCACGAGCCCT +
Preference number: 4 (lower is better)
Translates to: QVHSKGREAHLINIMFPTRAWPA*PPGTSP
Trigger: AGGGCTCGTGCCTGGAGGTCACGCTGGCCAAGCCCG...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGTCGACACAGTGGGAATaGCAGCGGCTGCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLSTQWE*QRLRRL
Trigger: CAGCCGCCGCAGCCGCTGTCATTCCCACTGTGTCGA...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTCGGCGGCCGAGTCACTaGTCATGGCTGCGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: KESFPVFGLRSAASLFNVRRPSH*SWLRWN
Trigger: ATTCCACCGCAGCCATGAGCAGTGACTCGGCCGCCG...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTCATCAGCGCCAGCAGTaGTGCCTCGTTGGGCGCGCC +
Preference number: 4 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVHQRQQ*CLVGRA
Trigger: GGCGCGCCCAACGAGGCAGCACTGCTGGCGCTGATG...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR GCA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGCCGCCGTACTTGCGCTaGCCGTTCTCTTGCACCATG +
Preference number: 4 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMPPYLR*PFSCTM
Trigger: CATGGTGCAAGAGAACGGGCAGCGCAAGTACGGCGG...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAACCTCGCAGCCACGCTaGGGGTGCGGGCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKTSQPR*GCGPSQ
Trigger: CTGGGAGGGCCCGCACCCGCAGCGTGGCTGCGAGGT...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATGGCGCAGCTCGTAGATaGGGCCCACGGCCTCGAACA +
Preference number: 4 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHGAARR*GPRPRT
Trigger: TGTTCGAGGCCGTGGGCCGCATCTACGAGCTGCGCC...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACGTTGAGCTCACGCACTaGGCGCTTGGCCTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHVELTH*ALGLVL
Trigger: AAGCACGAGGCCAAGCGCGCAGTGCGTGAGCTCAAC...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTGCCGCCGCCCCTGGCTaGCTTCTGGTAGCGCGAGTA +
Preference number: 4 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVAAAPG*LLVARV
Trigger: TACTCGCGCTACCAGAAGGCAGCCAGGGGCGGCGGC...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR GCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGGGCTCTGTTGCCAGCTaGACCTCGCCCTCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLGSVAS*TSPSAS
Trigger: AGAGGCCGAGGGCGAGGTGCAGCTGGCAACAGAGCC...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCCTGAGGTATGTAGCCTaGGTATCCTCCATACATGGC +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSLRYVA*VSSIHG
Trigger: GCCATGTATGGAGGATACGCAGGCTACATACCTCAG...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp AAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCACGCACTGCGCGCTTaGCCTCGTGCTTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: KYKSHQLLYQSYLSVLGLHALRA*PRACGS
Trigger: ACTGCCACAAGCACGAGGCCAAGCGCGCAGTGCGTG...CAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTGGTGGCTTTTATACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACAGCTTGCGGCGAGCCATaGCAGCCGCGCGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: QVHSKGREAHLINIMFPTACGEP*QPRGGS
Trigger: AGAGCCACCGCGCGGCTGCCATGGCTCGCCGCAAGC...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATTGGTGGCCCCACAGCTaGATGCGGCCAGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHWWPHS*MRPGMS
Trigger: GCTCATGCCTGGCCGCATCCAGCTGTGGGGCCACCA...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp AAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCAGTCCACGGCGATCTaGTGGCCCCACAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: KYKSHQLLYQSYLSVLGLQSTAI*WPHSWM
Trigger: CATCCAGCTGTGGGGCCACCAGATCGCCGTGGACTG...CAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTGGTGGCTTTTATACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGCAGCCGGGGTTGAACTaGCCGAAGCTCTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVQPGLN*PKLFLM
Trigger: CATCAAGAAGAGCTTCGGCCAGTTCAACCCCGGCTG...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGAGGAGTACACGTAGCTaGGCTGCTGCGCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMRSTRS*AAALPQ
Trigger: CTGAGGCAGCGCAGCAGCCCAGCTACGTGTACTCCT...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTAGGAGTACACGTAGCTaGGCTGCTGCGCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLARSTRS*AAALPQ
Trigger: CTGAGGCAGCGCAGCAGCCCAGCTACGTGTACTCCT...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTGGAACCCCTAGGCCCTaGGGCTCTGTTGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRGTPRP*GSVASC
Trigger: GCAGCTGGCAACAGAGCCCCAGGGCCTAGGGGTTCC...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
CDS-3UTR CCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCAATACTGAGCCCCAATaGCAGGGATGGCTACTGTAC +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSNTEPQ*QGWLLY
Trigger: GTACAGTAGCCATCCCTGCCATTGGGGCTCAGTATT...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp CAGCTGCACCTCGCCCTCGGCCTCTTATGCTGCCTGCTTGTAATAACAACACAAGAGCTGCTGGAAACATaGAATACTGAGCCCCAATGG +
Preference number: 4 (lower is better)
Translates to: QLHLALGLLCCLLVITTQELLET*NTEPQW
Trigger: CCATTGGGGCTCAGTATTCCATGTTTCCAGCAGCTC...TTGTGTTGTTATTACAAGCAGGCAGCATAAGAGGCCGAGGGCGAGGTGCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CCA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACAGCACTGGCTGGGTCTaGCTGCACAGCAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHSTGWV*LHSNGA
Trigger: AGCCCCATTGCTGTGCAGCCAGACCCAGCCAGTGCT...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACGGTAGACGTCGGGGATaGGGACCTGAATGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHGRRRG*GPEWQQ
Trigger: CTGCTGCCATTCAGGTCCCCATCCCCGACGTCTACC...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGTGGGGATCCCGCCGATaGAGAGGCGGCAGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLWGSRR*RGGSCP
Trigger: TGGACAACTGCCGCCTCTTCATCGGCGGGATCCCCA...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGGGCCGAAGCTCTTCTTaGTGGTGTCCTCGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMGRSSS*WCPRWS
Trigger: AGACCACCGAGGACACCATCAAGAAGAGCTTCGGCC...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTAGTCGCGGATCTTCTTaGCGCGCTCCACGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVSRGSS*RAPRSR
Trigger: CCGGCTGCGTGGAGCGCGTCAAGAAGATCCGCGACT...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR TCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGACCAGCTCAGTGCCGTTaGGGTTGTTCATGGCATGCA +
Preference number: 4 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGPAQCR*GCSWHA
Trigger: TGCATGCCATGAACAACCTCAACGGCACTGAGCTGG...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCGGGCTTGGCCAGCGTaGCCTCCAGGCACGAGCCCT +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSRAWPA*PPGTSP
Trigger: AGGGCTCGTGCCTGGAGGTCACGCTGGCCAAGCCCG...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGCCCTGTTGGGCCCAATaGGCGCGTTGTAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLPCWAQ*ARCRGS
Trigger: GCTACCCCTACAACGCGCTCATTGGGCCCAACAGGG...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGAAACATGGAATACTaGGCCCCAATGGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVGNMEY*APMAGM
Trigger: CATCCCTGCCATTGGGGCTCAGTATTCCATGTTTCC...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGCAGTAGGAATTCTCTaGACGTTTGGAGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVAVGIL*TFGATV
Trigger: CACGGTGGCTCCAAACGTTCAGAGAATTCCTACTGC...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATTCGGGGATGGGGACCTaGATGGCAGCAGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHSGMGT*MAAAGK
Trigger: CTTCCCTGCTGCTGCCATTCAGGTCCCCATCCCCGA...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCCCAGTGGGTCAGAATTaGTTAACCTTGGAGACTTGC +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSPVGQN*LTLETC
Trigger: GCAAGTCTCCAAGGTTAAGCAATTCTGACCCACTGG...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR GCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGCGGCGGCCGAGTCACTaGTCATGGCTGCGGTGGAAT +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLRRPSH*SWLRWN
Trigger: ATTCCACCGCAGCCATGAGCAGTGACTCGGCCGCCG...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTCCGCCGTACTTGCGCTaGCCGTTCTCTTGCACCATG +
Preference number: 4 (lower is better)
Translates to: KESFPVFGLRSAASLFNVPPYLR*PFSCTM
Trigger: CATGGTGCAAGAGAACGGGCAGCGCAAGTACGGCGG...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGGTGGGCCGCCGTACTTaGGCTGCCCGTTCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLVGRRT*AARSLA
Trigger: TGCAAGAGAACGGGCAGCGCAAGTACGGCGGCCCAC...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTAACCTCGCAGCCACGCTaGGGGTGCGGGCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLTSQPR*GCGPSQ
Trigger: CTGGGAGGGCCCGCACCCGCAGCGTGGCTGCGAGGT...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTCGTCGCGCGGGATCTTaGCCACGAAGACCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVRRAGS*PRRPRS
Trigger: GCTGCGAGGTCTTCGTGGGCAAGATCCCGCGCGACG...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR GCA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGCGTCGCGCGGGATCTTaGCCACGAAGACCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: HSKGREAHLINIMFPTPLRRAGS*PRRPRS
Trigger: GCTGCGAGGTCTTCGTGGGCAAGATCCCGCGCGACG...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGTTGAGCTCACGCACTaGGCGCTTGGCCTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: KESFPVFGLRSAASLFNVVELTH*ALGLVL
Trigger: AAGCACGAGGCCAAGCGCGCAGTGCGTGAGCTCAAC...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGGGCAGTTGTCCACGCTaGAGCACACGCCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: HSKGREAHLINIMFPTPLGSCPR*STRRAG
Trigger: GCCTGCTCGGCGTGTGCTGCAGCGTGGACAACTGCC...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGAGGTTGTTCATGGCATaGACGGCATCCTCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMRLFMA*TASSRL
Trigger: CAGCCGCGAGGATGCCGTGCATGCCATGAACAACCT...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACAGCCGCCGCCCCTGGCTaGCTTCTGGTAGCGCGAGTA +
Preference number: 4 (lower is better)
Translates to: QVHSKGREAHLINIMFPTAAAPG*LLVARV
Trigger: TACTCGCGCTACCAGAAGGCAGCCAGGGGCGGCGGC...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCTTTAGGGGCTGGAGCTaGTGGAAACATGGAATACTG +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSFRGWS*WKHGIL
Trigger: CAGTATTCCATGTTTCCAGCAGCTCCAGCCCCTAAA...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGCAGCGCCAGCAGTGCTaGCTCCTCAGTGAGCCAAGG +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLQRQQC*LLSEPR
Trigger: CCTTGGCTCACTGAGGAGGCAGCACTGCTGGCGCTG...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514014.1
CDS-3UTR CCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTTCTTGTCGGCCGCGCTaGCGTAGACGATCACGTCCA +
Preference number: 4 (lower is better)
Translates to: KESFPVFGLRSAASLFNVSCRPR*RRRSRP
Trigger: TGGACGTGATCGTCTACGCCAGCGCGGCCGACAAGA...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCAGGAACCCCTAGGCCCTaGGGCTCTGTTGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSGTPRP*GSVASC
Trigger: GCAGCTGGCAACAGAGCCCCAGGGCCTAGGGGTTCC...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
CDS-3UTR CCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTAGCACTGGCTGGGTCTaGCTGCACAGCAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: KESFPVFGLRSAASLFNVSTGWV*LHSNGA
Trigger: AGCCCCATTGCTGTGCAGCCAGACCCAGCCAGTGCT...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCCGGCGGCAGCAGCACTaGCTGGGTCTGGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: VSYATRLKPCAYSATENSRRQQH*LGLAAQ
Trigger: CTGTGCAGCCAGACCCAGCCAGTGCTGCTGCCGCCG...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTAGTTATTGGGCGGCCCTaGAAAGGTGGTGGCGTCGAC +
Preference number: 4 (lower is better)
Translates to: FVESLIPTDLSLNAACGVVIGRP*KGGGVD
Trigger: GTCGACGCCACCACCTTTCCAGGGCCGCCCAATAAC...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GGAACAGATAAGTCCCAGATAGGAGGCTCACTGATACTTAATTGGCCATGTCACCAAATGGCACGTAACTaGCCCCGTAGATCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GTDKSQIGGSLILNWPCHQMARN*PRRSRQ
Trigger: CTGCCGGGATCTACGGGGCCAGTTACGTGCCATTTG...GTGACATGGCCAATTAAGTATCAGTGAGCCTCCTATCTGGGACTTATCTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CCA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGCAAATGGCACGTAACTaGCCCCGTAGATCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMQMARN*PRRSRQ
Trigger: CTGCCGGGATCTACGGGGCCAGTTACGTGCCATTTG...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGAAGCTGGAGCAGCAAATaGCACGTAACTGGCCCCGTA +
Preference number: 4 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGSWSSK*HVTGPV
Trigger: TACGGGGCCAGTTACGTGCCATTTGCTGCTCCAGCT...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GGCTACTGTACCAGGTTTAATGGCAACTGGGTTGACGGTAGGGATTTCCAAATTACATTGCGGTGGGATTaGGAATCTGGGGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GYCTRFNGNWVDGRDFQITLRWD*ESGEEG
Trigger: CCCCTCCTCCCCAGATTCCCAATCCCACCGCAATGT...AATTTGGAAATCCCTACCGTCAACCCAGTTGCCATTAAACCTGGTACAGTAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTAGGGCCGAGCATGGCTTaGCCGCGCGCAGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLGPSMA*PRAGRS
Trigger: GCTCCTGCCTGCGCGCGGCCAAGCCATGCTCGGCCC...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514014.1
CDS-3UTR CCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGCTCCGTTACCTGAGCTaGGGCCGAGCATGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLLRYLS*GRAWLG
Trigger: GCCAAGCCATGCTCGGCCCCAGCTCAGGTAACGGAG...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514014.1
3UTR CAA 72 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTaGCCAAACATTGCGGTGGGATTGGGAATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QLLYQSYLSVLG*PNIAVGLGIWG
Trigger: TCCCCAGATTCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTCGTCAAAGTCCATCATaGGGCGCAGCTCGTAGATGC +
Preference number: 4 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLARQSPS*GAARRC
Trigger: GCATCTACGAGCTGCGCCTCATGATGGACTTTGACG...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp AAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGGGATCTCGTAGTTGTTaGGCTCACGCACTGCGCGCT +
Preference number: 4 (lower is better)
Translates to: KYKSHQLLYQSYLSVLGLGSRSC*AHALRA
Trigger: AGCGCGCAGTGCGTGAGCTCAACAACTACGAGATCC...CAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTGGTGGCTTTTATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp AAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCGGTGGTCTCGATCATaGGGTTGCGCACGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: KYKSHQLLYQSYLSVLGLRWSRS*GCARRG
Trigger: TCCTCTACGTGCGCAACCTCATGATCGAGACCACCG...CAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTGGTGGCTTTTATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATCATCCTCGCGGCTGGTaGAGTGCACGAAGGCGTAGT +
Preference number: 4 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHHPRGW*SARRRS
Trigger: ACTACGCCTTCGTGCACTTCACCAGCCGCGAGGATG...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGCATCCTCGCGGCTGGTaGAGTGCACGAAGGCGTAGT +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLHPRGW*SARRRS
Trigger: ACTACGCCTTCGTGCACTTCACCAGCCGCGAGGATG...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGAGCAGTAGGAATTCTCTaGACGTTTGGAGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGAVGIL*TFGATV
Trigger: CACGGTGGCTCCAAACGTTCAGAGAATTCCTACTGC...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGCCGCCGTACTTGCGCTaGCCGTTCTCTTGCACCATG +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLPPYLR*PFSCTM
Trigger: CATGGTGCAAGAGAACGGGCAGCGCAAGTACGGCGG...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGGGCGCAGCTCGTAGATaGGGCCCACGGCCTCGAACA +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQAGAARR*GPRPRT
Trigger: TGTTCGAGGCCGTGGGCCGCATCTACGAGCTGCGCC...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATGCGCGCTTGGCCTCGTaGTTGTGGCAGTACATGACG +
Preference number: 4 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHARLAS*LWQYMT
Trigger: CGTCATGTACTGCCACAAGCACGAGGCCAAGCGCGC...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGGCGCGCTTGGCCTCGTaGTTGTGGCAGTACATGACG +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLARLAS*LWQYMT
Trigger: CGTCATGTACTGCCACAAGCACGAGGCCAAGCGCGC...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGGTTGAGCTCACGCACTaGGCGCTTGGCCTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLVELTH*ALGLVL
Trigger: AAGCACGAGGCCAAGCGCGCAGTGCGTGAGCTCAAC...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGGCCGCCGCCCCTGGCTaGCTTCTGGTAGCGCGAGTA +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKAAAPG*LLVARV
Trigger: TACTCGCGCTACCAGAAGGCAGCCAGGGGCGGCGGC...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTGCCGCCGCCCCTGGCTaGCTTCTGGTAGCGCGAGTA +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSAAAPG*LLVARV
Trigger: TACTCGCGCTACCAGAAGGCAGCCAGGGGCGGCGGC...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAGCCCTGGGGCTCTGTTaGCAGCTGCACCTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKALGLC*QLHLAL
Trigger: GAGGGCGAGGTGCAGCTGGCAACAGAGCCCCAGGGC...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGCCCTCGGCCTCTTATaGTGCCTGCTTGTAATAACA +
Preference number: 4 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVALGLL*CLLVIT
Trigger: TGTTATTACAAGCAGGCAGCATAAGAGGCCGAGGGC...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGCTGCACATTCCACAGTaGAAAGCGGGAGCGGCGACC +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLLHIPQ*KAGAAT
Trigger: GGTCGCCGCTCCCGCTTTCCACTGTGGAATGTGCAG...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR CCA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCCTCGTGCTTGTaGCAGTACATGACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMLASCL*QYMTKA
Trigger: CGCCTTCGTCATGTACTGCCACAAGCACGAGGCCAA...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GGAACAGATAAGTCCCAGATAGGAGGCTCACTGATACTTAATTGGCCATGTCACTTGGCCTCGTGCTTGTaGCAGTACATGACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: GTDKSQIGGSLILNWPCHLASCL*QYMTKA
Trigger: CGCCTTCGTCATGTACTGCCACAAGCACGAGGCCAA...GTGACATGGCCAATTAAGTATCAGTGAGCCTCCTATCTGGGACTTATCTGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTGTCGGCCGCGCTaGCGTAGACGATCACGTCCA +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLSCRPR*RRRSRP
Trigger: TGGACGTGATCGTCTACGCCAGCGCGGCCGACAAGA...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCGCTTGCGGCGAGCCATaGCAGCCGCGCGGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVACGEP*QPRGGS
Trigger: AGAGCCACCGCGCGGCTGCCATGGCTCGCCGCAAGC...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCACAGTCCACGGCGATCTaGTGGCCCCACAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSQSTAI*WPHSWM
Trigger: CATCCAGCTGTGGGGCCACCAGATCGCCGTGGACTG...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTCAGCCGGGGTTGAACTaGCCGAAGCTCTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLAQPGLN*PKLFLM
Trigger: CATCAAGAAGAGCTTCGGCCAGTTCAACCCCGGCTG...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAGGAGTACACGTAGCTaGGCTGCTGCGCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLRSTRS*AAALPQ
Trigger: CTGAGGCAGCGCAGCAGCCCAGCTACGTGTACTCCT...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCAGGTTTAATGGCAACTaGGTTGACGGTAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSRFNGN*VDGRDF
Trigger: GAAATCCCTACCGTCAACCCAGTTGCCATTAAACCT...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGAGCACTGGCTGGGTCTaGCTGCACAGCAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLSTGWV*LHSNGA
Trigger: AGCCCCATTGCTGTGCAGCCAGACCCAGCCAGTGCT...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCGGCGGCAGCAGCACTaGCTGGGTCTGGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSRRQQH*LGLAAQ
Trigger: CTGTGCAGCCAGACCCAGCCAGTGCTGCTGCCGCCG...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAACGGCGGCAGCAGCACTaGCTGGGTCTGGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKRRQQH*LGLAAQ
Trigger: CTGTGCAGCCAGACCCAGCCAGTGCTGCTGCCGCCG...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTAGCCCTGGAAAGGTGGTaGCGTCGACACAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: FVESLIPTDLSLNAACGVALERW*RRHSGN
Trigger: ATTCCCACTGTGTCGACGCCACCACCTTTCCAGGGC...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp AAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGGCCCTGGAAAGGTGGTaGCGTCGACACAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: KYKSHQLLYQSYLSVLGLALERW*RRHSGN
Trigger: ATTCCCACTGTGTCGACGCCACCACCTTTCCAGGGC...CAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTGGTGGCTTTTATACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCGCGGCCCTGGAAAGGTaGTGGCGTCGACACAGTGGG +
Preference number: 4 (lower is better)
Translates to: VSYATRLKPCAYSATENSAALER*WRRHSG
Trigger: CCCACTGTGTCGACGCCACCACCTTTCCAGGGCCGC...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATGTTATTGGGCGGCCCTaGAAAGGTGGTGGCGTCGAC +
Preference number: 4 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHVIGRP*KGGGVD
Trigger: GTCGACGCCACCACCTTTCCAGGGCCGCCCAATAAC...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGGTTATTGGGCGGCCCTaGAAAGGTGGTGGCGTCGAC +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLVIGRP*KGGGVD
Trigger: GTCGACGCCACCACCTTTCCAGGGCCGCCCAATAAC...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGAGTATACTGGAGTTATTaGGCGGCCCTGGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGVYWSY*AALERW
Trigger: CCACCTTTCCAGGGCCGCCCAATAACTCCAGTATAC...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TTCATGATATCGGCTATATATACCACGACCAGCAGAATATCCCCCGAGGTAGGAAGCCACCGTGTATACTaGAGTTATTGGGCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: FMISAIYTTTSRISPEVGSHRVY*SYWAAL
Trigger: CAGGGCCGCCCAATAACTCCAGTATACACGGTGGCT...TCCTACCTCGGGGGATATTCTGCTGGTCGTGGTATATATAGCCGATATCATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTAGCTGGAGCAGCAAATaGCACGTAACTGGCCCCGTA +
Preference number: 4 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLASWSSK*HVTGPV
Trigger: TACGGGGCCAGTTACGTGCCATTTGCTGCTCCAGCT...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGCGTATCCTCCATACATaGCGGCCGCGGCTGCCGCGT +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQARILHT*RPRLPR
Trigger: ACGCGGCAGCCGCGGCCGCCATGTATGGAGGATACG...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGAGCTTTCCAGTGTTTaGACTCAGAAGTGCGGCAAG +
Preference number: 4 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVELSSV*TQKCGK
Trigger: CTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTC...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTGTGGGATTGGGAATCTaGGGAGGAGGGGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRVGLGI*GGGDRV
Trigger: CACCCTGTCCCCTCCTCCCCAGATTCCCAATCCCAC...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTACATTGCGGTGGGATTaGGAATCTGGGGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: KESFPVFGLRSAASLFNVTLRWD*ESGEEG
Trigger: CCCCTCCTCCCCAGATTCCCAATCCCACCGCAATGT...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCCTTCGCAGCAGGGCCTaGGGCCTGGGCGCTGCTCGT +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVLRSRA*GLGAAR
Trigger: ACGAGCAGCGCCCAGGCCCCAGGCCCTGCTGCGAAG...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514014.1
3UTR CAA 72 bp GGGATGGCTACTGTACCAGGTTTAATGGCAACTGGGTaGACGGTAGGGATTTCCAAATTCGGCACCAGTTCA +
Preference number: 4 (lower is better)
Translates to: GMATVPGLMATG*TVGISKFGTSS
Trigger: TGAACTGGTGCCGAATTTGGAAATCCCTACCGTCAACCCAGTTGCCATTAAACCTGGTACAGTAGCCATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR TCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTCGTCAAAGTCCATCATaGGGCGCAGCTCGTAGATGC +
Preference number: 4 (lower is better)
Translates to: KESFPVFGLRSAASLFNVRQSPS*GAARRC
Trigger: GCATCTACGAGCTGCGCCTCATGATGGACTTTGACG...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTGCTTGTGGCAGTACATaGCGAAGGCGTAGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVACGST*RRRSRG
Trigger: ACCGCGGCTACGCCTTCGTCATGTACTGCCACAAGC...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR TCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTAGGATGCGGCCAGGCATaGGCTTGCGGCGAGCCATGG +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLGCGQA*ACGEPW
Trigger: CCATGGCTCGCCGCAAGCTCATGCCTGGCCGCATCC...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCGGATGCGGCCAGGCATaGGCTTGCGGCGAGCCATGG +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVGCGQA*ACGEPW
Trigger: CCATGGCTCGCCGCAAGCTCATGCCTGGCCGCATCC...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTCGGTGGTCTCGATCATaGGGTTGCGCACGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRRWSRS*GCARRG
Trigger: TCCTCTACGTGCGCAACCTCATGATCGAGACCACCG...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTGGCCGAAGCTCTTCTTaGTGGTGTCCTCGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRGRSSS*WCPRWS
Trigger: AGACCACCGAGGACACCATCAAGAAGAGCTTCGGCC...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGCCACGCAGCCGGGGTTaGACTGGCCGAAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQAPRSRG*TGRSSS
Trigger: AGAAGAGCTTCGGCCAGTTCAACCCCGGCTGCGTGG...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp GGAACAGATAAGTCCCAGATAGGAGGCTCACTGATACTTAATTGGCCATGTCACGGAAACATGGAATACTaGGCCCCAATGGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: GTDKSQIGGSLILNWPCHGNMEY*APMAGM
Trigger: CATCCCTGCCATTGGGGCTCAGTATTCCATGTTTCC...GTGACATGGCCAATTAAGTATCAGTGAGCCTCCTATCTGGGACTTATCTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR TCA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACGGAAACATGGAATACTaGGCCCCAATGGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHGNMEY*APMAGM
Trigger: CATCCCTGCCATTGGGGCTCAGTATTCCATGTTTCC...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTGGAAACATGGAATACTaGGCCCCAATGGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLAGNMEY*APMAGM
Trigger: CATCCCTGCCATTGGGGCTCAGTATTCCATGTTTCC...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACATCGGGGATGGGGACCTaGATGGCAGCAGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: QVHSKGREAHLINIMFPTSGMGT*MAAAGK
Trigger: CTTCCCTGCTGCTGCCATTCAGGTCCCCATCCCCGA...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp AGCTGCTGGAAACATGGAATACTGAGCCCCAATGGCAGGGATGGCTACTGTACCTTCAGGTTGCATGTGTaGATCCAACATGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SCWKHGILSPNGRDGYCTFRLHV*IQHVPS
Trigger: AGAAGGAACATGTTGGATTCACACATGCAACCTGAA...GGTACAGTAGCCATCCCTGCCATTGGGGCTCAGTATTCCATGTTTCCAGCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR GCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTCGTTCTCTTGCACCATaGTGTAGCCCGTGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRRSLAP*CSPCAP
Trigger: TGGAGCGCACGGGCTACAGCATGGTGCAAGAGAACG...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCGTCGCGCGGGATCTTaGCCACGAAGACCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSRRAGS*PRRPRS
Trigger: GCTGCGAGGTCTTCGTGGGCAAGATCCCGCGCGACG...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGGGCGCAGCTCGTAGATaGGGCCCACGGCCTCGAACA +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKGAARR*GPRPRT
Trigger: TGTTCGAGGCCGTGGGCCGCATCTACGAGCTGCGCC...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAGGCAGTTGTCCACGCTaGAGCACACGCCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKGSCPR*STRRAG
Trigger: GCCTGCTCGGCGTGTGCTGCAGCGTGGACAACTGCC...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGGGCAGTTGTCCACGCTaGAGCACACGCCGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKGSCPR*STRRAG
Trigger: GCCTGCTCGGCGTGTGCTGCAGCGTGGACAACTGCC...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAGGTTGTTCATGGCATaGACGGCATCCTCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLRLFMA*TASSRL
Trigger: CAGCCGCGAGGATGCCGTGCATGCCATGAACAACCT...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTAGGTTGTTCATGGCATaGACGGCATCCTCGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRRLFMA*TASSRL
Trigger: CAGCCGCGAGGATGCCGTGCATGCCATGAACAACCT...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTGCCCTCGGCCTCTTATaGTGCCTGCTTTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLAALGLL*CLLSQS
Trigger: ACTTTGTGAAAGCAGGCAGCATAAGAGGCCGAGGGC...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000381793.6
CDS-3UTR GCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGGGCTCTGTTGCCAGCTaGACCTCGCCCTCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKGSVAS*TSPSAS
Trigger: AGAGGCCGAGGGCGAGGTGCAGCTGGCAACAGAGCC...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
CDS-3UTR GCA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGTTTAGGGGCTGGAGCTaGTGGAAACATGGAATACTG +
Preference number: 4 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVFRGWS*WKHGIL
Trigger: CAGTATTCCATGTTTCCAGCAGCTCCAGCCCCTAAA...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGATGGGGCTGATCATGTaGTCCACTGTGTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVMGLIM*STVWIL
Trigger: CAAAATCCACACAGTGGAGCACATGATCAGCCCCAT...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGACTGAGGTATGTAGCCTaGGTATCCTCCATACATGGC +
Preference number: 4 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGLRYVA*VSSIHG
Trigger: GCCATGTATGGAGGATACGCAGGCTACATACCTCAG...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp GGAACAGATAAGTCCCAGATAGGAGGCTCACTGATACTTAATTGGCCATGTCACTGTGGTCTGTCTTCGTaGTGGTCACCAGCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: GTDKSQIGGSLILNWPCHCGLSS*WSPASV
Trigger: TACTGAGGCTGGTGACCAGCACGAAGACAGACCACA...GTGACATGGCCAATTAAGTATCAGTGAGCCTCCTATCTGGGACTTATCTGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR GCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCCAACTGCGTTTTACTTaGTACCTTATTGCACACCTC +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSQLRFT*YLIAHL
Trigger: GAGGTGTGCAATAAGGTAGCAAGTAAAACGCAGTTG...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCTTCAGGCAGCTTCCTTaGGATTCCTCTGTTCAATTT +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSFRQLP*DSSVQF
Trigger: AAATTGAACAGAGGAATCCCAAGGAAGCTGCCTGAA...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTATTGGCCTCGTGCTTGTaGCAGTACATGACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: FVESLIPTDLSLNAACGVLASCL*QYMTKA
Trigger: CGCCTTCGTCATGTACTGCCACAAGCACGAGGCCAA...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACACGCACTGCGCGCTTaGCCTCGTGCTTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: QVHSKGREAHLINIMFPTHALRA*PRACGS
Trigger: ACTGCCACAAGCACGAGGCCAAGCGCGCAGTGCGTG...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTTGGTGGCCCCACAGCTaGATGCGGCCAGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSWWPHS*MRPGMS
Trigger: GCTCATGCCTGGCCGCATCCAGCTGTGGGGCCACCA...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATGGTGGCCCCACAGCTaGATGCGGCCAGGCATGAGC +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKWWPHS*MRPGMS
Trigger: GCTCATGCCTGGCCGCATCCAGCTGTGGGGCCACCA...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTCAGCCGGGGTTGAACTaGCCGAAGCTCTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: KESFPVFGLRSAASLFNVQPGLN*PKLFLM
Trigger: CATCAAGAAGAGCTTCGGCCAGTTCAACCCCGGCTG...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTACGGCGGCAGCAGCACTaGCTGGGTCTGGCTGCACAG +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLRRQQH*LGLAAQ
Trigger: CTGTGCAGCCAGACCCAGCCAGTGCTGCTGCCGCCG...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGGCCCTGGAAAGGTGGTaGCGTCGACACAGTGGGAAT +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLALERW*RRHSGN
Trigger: ATTCCCACTGTGTCGACGCCACCACCTTTCCAGGGC...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGGCGGCCCTGGAAAGGTaGTGGCGTCGACACAGTGGG +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKAALER*WRRHSG
Trigger: CCCACTGTGTCGACGCCACCACCTTTCCAGGGCCGC...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTGCGGCCCTGGAAAGGTaGTGGCGTCGACACAGTGGG +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSAALER*WRRHSG
Trigger: CCCACTGTGTCGACGCCACCACCTTTCCAGGGCCGC...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp GGCTACTGTACCAGGTTTAATGGCAACTGGGTTGACGGTAGGGATTTCCAAATTGTATACTGGAGTTATTaGGCGGCCCTGGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GYCTRFNGNWVDGRDFQIVYWSY*AALERW
Trigger: CCACCTTTCCAGGGCCGCCCAATAACTCCAGTATAC...AATTTGGAAATCCCTACCGTCAACCCAGTTGCCATTAAACCTGGTACAGTAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR TCA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCGCTTGTGGCAGTACATaGCGAAGGCGTAGCCGCGGT +
Preference number: 4 (lower is better)
Translates to: VSYATRLKPCAYSATENSACGST*RRRSRG
Trigger: ACCGCGGCTACGCCTTCGTCATGTACTGCCACAAGC...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTTGGGGATCCCGCCGATaGAGAGGCGGCAGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSWGSRR*RGGSCP
Trigger: TGGACAACTGCCGCCTCTTCATCGGCGGGATCCCCA...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAACCAGCACGCCCTCGGTaGCCTTGGCAATCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKPARPR*PWQSPP
Trigger: TGGAGGAGATTGCCAAGGTCACCGAGGGCGTGCTGG...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCCAGCACGCCCTCGGTaGCCTTGGCAATCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSPARPR*PWQSPP
Trigger: TGGAGGAGATTGCCAAGGTCACCGAGGGCGTGCTGG...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGCATCCTCGCGGCTGGTaGAGTGCACGAAGGCGTAGT +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQAHPRGW*SARRRS
Trigger: ACTACGCCTTCGTGCACTTCACCAGCCGCGAGGATG...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGCCAGCTCAGTGCCGTTaGGGTTGTTCATGGCATGCA +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLPAQCR*GCSWHA
Trigger: TGCATGCCATGAACAACCTCAACGGCACTGAGCTGG...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGCCCTGTTGGGCCCAATaGGCGCGTTGTAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKPCWAQ*ARCRGS
Trigger: GCTACCCCTACAACGCGCTCATTGGGCCCAACAGGG...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGGCACAGCAATGGGGCTaGTCATGTGCTCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLAQQWG*SCAPLC
Trigger: ACACAGTGGAGCACATGATCAGCCCCATTGCTGTGC...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTCGACACAGTGGGAATaGCAGCGGCTGCGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVSTQWE*QRLRRL
Trigger: CAGCCGCCGCAGCCGCTGTCATTCCCACTGTGTCGA...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGAAGGCACATGGAGAATaGGCCCCGGCTAACGGTGGC +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQAKAHGE*APANGG
Trigger: GCCACCGTTAGCCGGGGCTCATTCTCCATGTGCCTT...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCAAGGCACATGGAGAATaGGCCCCGGCTAACGGTGGC +
Preference number: 4 (lower is better)
Translates to: VSYATRLKPCAYSATENSKAHGE*APANGG
Trigger: GCCACCGTTAGCCGGGGCTCATTCTCCATGTGCCTT...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGAAGCATAACTTTCTGCTaGAAAGAGTCTCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGSITFC*KESLGV
Trigger: GACCCCCAGAGACTCTTTTCAGCAGAAAGTTATGCT...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGATGTTTCCAACACCCTTaGGGACCATGGACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGCFQHP*GPWTVL
Trigger: CAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACA...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGCACACAGTCAGGGGATaGGGATCTGATCCGAATTAC +
Preference number: 4 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMHTVRG*GSDPNY
Trigger: GTAATTCGGATCAGATCCTCATCCCCTGACTGTGTG...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAGTGGGCCGCCGTACTTaGGCTGCCCGTTCTCTTGCA +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKVGRRT*AARSLA
Trigger: TGCAAGAGAACGGGCAGCGCAAGTACGGCGGCCCAC...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTAGGCGCAGCTCGTAGATaGGGCCCACGGCCTCGAACA +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLGAARR*GPRPRT
Trigger: TGTTCGAGGCCGTGGGCCGCATCTACGAGCTGCGCC...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGACTCGGCCTCTTATGCTaGCTGCTTTCACAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGLGLLC*LLSQSS
Trigger: ACTACTTTGTGAAAGCAGGCAGCATAAGAGGCCGAG...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000381793.6
CDS-3UTR GCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGCTGGCTGGGTCTGGCTaGACAGCAATGGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQALAGSG*TAMGLI
Trigger: GATCAGCCCCATTGCTGTGCAGCCAGACCCAGCCAG...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp GGCTACTGTACCAGGTTTAATGGCAACTGGGTTGACGGTAGGGATTTCCAAATTAGGCTTGCCAAACATTaGGGTGGGATTGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: GYCTRFNGNWVDGRDFQIRLAKH*GGIGNL
Trigger: CAGATTCCCAATCCCACCGCAATGTTTGGCAAGCCT...AATTTGGAAATCCCTACCGTCAACCCAGTTGCCATTAAACCTGGTACAGTAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR GCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGAAGTTCACCCATCAAGTaGACAGCAAAGGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGSSPIK*TAKEER
Trigger: CCTCTCTTCCTTTGCTGTGCACTTGATGGGTGAACT...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTTCCTCCTCCTGGATGTaGACACCCCAATCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: KESFPVFGLRSAASLFNVSSSWM*TPQSSS
Trigger: TGAACTGGATTGGGGTGTGCACATCCAGGAGGAGGA...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp GGCTACTGTACCAGGTTTAATGGCAACTGGGTTGACGGTAGGGATTTCCAAATTTGCCCCAGTCTTAATTaGAGGTGGCTACACCTTTGC +
Preference number: 4 (lower is better)
Translates to: GYCTRFNGNWVDGRDFQICPSLN*RWLHLC
Trigger: GCAAAGGTGTAGCCACCTGCAATTAAGACTGGGGCA...AATTTGGAAATCCCTACCGTCAACCCAGTTGCCATTAAACCTGGTACAGTAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CCA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGCCGAGTCACTGCTCATaGCTGCGGTGGAATCCTCTG +
Preference number: 4 (lower is better)
Translates to: HSKGREAHLINIMFPTPLPSHCS*LRWNPL
Trigger: CAGAGGATTCCACCGCAGCCATGAGCAGTGACTCGG...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCACGCACTGCGCGCTTaGCCTCGTGCTTGTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSHALRA*PRACGS
Trigger: ACTGCCACAAGCACGAGGCCAAGCGCGCAGTGCGTG...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTATCCACGGCGATCTGGTaGCCCCACAGCTGGATGCGG +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLSTAIW*PHSWMR
Trigger: CCGCATCCAGCTGTGGGGCCACCAGATCGCCGTGGA...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACAAGGAGTACACGTAGCTaGGCTGCTGCGCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: QVHSKGREAHLINIMFPTRSTRS*AAALPQ
Trigger: CTGAGGCAGCGCAGCAGCCCAGCTACGTGTACTCCT...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACAATACTGAGCCCCAATaGCAGGGATGGCTACTGTAC +
Preference number: 4 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHNTEPQ*QGWLLY
Trigger: GTACAGTAGCCATCCCTGCCATTGGGGCTCAGTATT...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
CDS-3UTR CCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGAGCACTGGCTGGGTCTaGCTGCACAGCAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQASTGWV*LHSNGA
Trigger: AGCCCCATTGCTGTGCAGCCAGACCCAGCCAGTGCT...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCGCGGCCCTGGAAAGGTaGTGGCGTCGACACAGTGGG +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVAALER*WRRHSG
Trigger: CCCACTGTGTCGACGCCACCACCTTTCCAGGGCCGC...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGGTTATTGGGCGGCCCTaGAAAGGTGGTGGCGTCGAC +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQAVIGRP*KGGGVD
Trigger: GTCGACGCCACCACCTTTCCAGGGCCGCCCAATAAC...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACAGTTATTGGGCGGCCCTaGAAAGGTGGTGGCGTCGAC +
Preference number: 4 (lower is better)
Translates to: QVHSKGREAHLINIMFPTVIGRP*KGGGVD
Trigger: GTCGACGCCACCACCTTTCCAGGGCCGCCCAATAAC...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp AAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGGTATACTGGAGTTATTaGGCGGCCCTGGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: KYKSHQLLYQSYLSVLGLVYWSY*AALERW
Trigger: CCACCTTTCCAGGGCCGCCCAATAACTCCAGTATAC...CAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTGGTGGCTTTTATACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGAGCCACCGTGTATACTaGAGTTATTGGGCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLSHRVY*SYWAAL
Trigger: CAGGGCCGCCCAATAACTCCAGTATACACGGTGGCT...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTCAAATGGCACGTAACTaGCCCCGTAGATCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVQMARN*PRRSRQ
Trigger: CTGCCGGGATCTACGGGGCCAGTTACGTGCCATTTG...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAGCTGGAGCAGCAAATaGCACGTAACTGGCCCCGTA +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLSWSSK*HVTGPV
Trigger: TACGGGGCCAGTTACGTGCCATTTGCTGCTCCAGCT...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCCGTATCCTCCATACATaGCGGCCGCGGCTGCCGCGT +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVRILHT*RPRLPR
Trigger: ACGCGGCAGCCGCGGCCGCCATGTATGGAGGATACG...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACAGGTAGACGTCGGGGATaGGGACCTGAATGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QVHSKGREAHLINIMFPTGRRRG*GPEWQQ
Trigger: CTGCTGCCATTCAGGTCCCCATCCCCGACGTCTACC...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCCCATTGCAAGTCTTTTaGAAATGTATGAACGTAGGC +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSPLQVF*KCMNVG
Trigger: GCCTACGTTCATACATTTCCAAAAGACTTGCAATGG...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGGTGGGATTGGGAATCTaGGGAGGAGGGGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQAVGLGI*GGGDRV
Trigger: CACCCTGTCCCCTCCTCCCCAGATTCCCAATCCCAC...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACAGGATCTCGTAGTTGTTaGGCTCACGCACTGCGCGCT +
Preference number: 4 (lower is better)
Translates to: QVHSKGREAHLINIMFPTGSRSC*AHALRA
Trigger: AGCGCGCAGTGCGTGAGCTCAACAACTACGAGATCC...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGGGATCTCGTAGTTGTTaGGCTCACGCACTGCGCGCT +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQAGSRSC*AHALRA
Trigger: AGCGCGCAGTGCGTGAGCTCAACAACTACGAGATCC...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTGGGGATCCCGCCGATaGAGAGGCGGCAGTTGTCCA +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVWGSRR*RGGSCP
Trigger: TGGACAACTGCCGCCTCTTCATCGGCGGGATCCCCA...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTACCAGCACGCCCTCGGTaGCCTTGGCAATCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLPARPR*PWQSPP
Trigger: TGGAGGAGATTGCCAAGGTCACCGAGGGCGTGCTGG...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGGGCCGAAGCTCTTCTTaGTGGTGTCCTCGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQAGRSSS*WCPRWS
Trigger: AGACCACCGAGGACACCATCAAGAAGAGCTTCGGCC...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTACCACGCAGCCGGGGTTaGACTGGCCGAAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLPRSRG*TGRSSS
Trigger: AGAAGAGCTTCGGCCAGTTCAACCCCGGCTGCGTGG...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCCCACGCAGCCGGGGTTaGACTGGCCGAAGCTCTTCT +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVPRSRG*TGRSSS
Trigger: AGAAGAGCTTCGGCCAGTTCAACCCCGGCTGCGTGG...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGCATCCTCGCGGCTGGTaGAGTGCACGAAGGCGTAGT +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKHPRGW*SARRRS
Trigger: ACTACGCCTTCGTGCACTTCACCAGCCGCGAGGATG...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTCCAGCTCAGTGCCGTTaGGGTTGTTCATGGCATGCA +
Preference number: 4 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVPAQCR*GCSWHA
Trigger: TGCATGCCATGAACAACCTCAACGGCACTGAGCTGG...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR TCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTACCCTGTTGGGCCCAATaGGCGCGTTGTAGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLPCWAQ*ARCRGS
Trigger: GCTACCCCTACAACGCGCTCATTGGGCCCAACAGGG...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGGCACAGCAATGGGGCTaGTCATGTGCTCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: HSKGREAHLINIMFPTPLAQQWG*SCAPLC
Trigger: ACACAGTGGAGCACATGATCAGCCCCATTGCTGTGC...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGGCAGTAGGAATTCTCTaGACGTTTGGAGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLAVGIL*TFGATV
Trigger: CACGGTGGCTCCAAACGTTCAGAGAATTCCTACTGC...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTCGGGGATGGGGACCTaGATGGCAGCAGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVSGMGT*MAAAGK
Trigger: CTTCCCTGCTGCTGCCATTCAGGTCCCCATCCCCGA...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGAAGGCACATGGAGAATaGGCCCCGGCTAACGGTGGC +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKKAHGE*APANGG
Trigger: GCCACCGTTAGCCGGGGCTCATTCTCCATGTGCCTT...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTGTTTCCAACACCCTTaGGGACCATGGACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMCFQHP*GPWTVL
Trigger: CAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACA...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGACAGGGGATGAGGATCTaGTCCGAATTACATTTTGTC +
Preference number: 4 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGQGMRI*SELHFV
Trigger: GACAAAATGTAATTCGGATCAGATCCTCATCCCCTG...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTCACACAGTCAGGGGATaGGGATCTGATCCGAATTAC +
Preference number: 4 (lower is better)
Translates to: KESFPVFGLRSAASLFNVHTVRG*GSDPNY
Trigger: GTAATTCGGATCAGATCCTCATCCCCTGACTGTGTG...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTCTCTCTATCCCAAGCTaGACATTCCACAGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLALSIPS*TFHSGK
Trigger: CTTTCCACTGTGGAATGTGCAGCTTGGGATAGAGAG...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR GCA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGCTCTCTATCCCAAGCTaGACATTCCACAGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMLSIPS*TFHSGK
Trigger: CTTTCCACTGTGGAATGTGCAGCTTGGGATAGAGAG...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR GCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTGCGCGCTTGGCCTCGTaGTTGTGGCAGTACATGACG +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSARLAS*LWQYMT
Trigger: CGTCATGTACTGCCACAAGCACGAGGCCAAGCGCGC...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGGCGCGCTTGGCCTCGTaGTTGTGGCAGTACATGACG +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKARLAS*LWQYMT
Trigger: CGTCATGTACTGCCACAAGCACGAGGCCAAGCGCGC...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTGTTGAGCTCACGCACTaGGCGCTTGGCCTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSVELTH*ALGLVL
Trigger: AAGCACGAGGCCAAGCGCGCAGTGCGTGAGCTCAAC...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAGTTGAGCTCACGCACTaGGCGCTTGGCCTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKVELTH*ALGLVL
Trigger: AAGCACGAGGCCAAGCGCGCAGTGCGTGAGCTCAAC...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp GGAACAGATAAGTCCCAGATAGGAGGCTCACTGATACTTAATTGGCCATGTCACATGGGGCTGATCATGTaGTCCACTGTGTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: GTDKSQIGGSLILNWPCHMGLIM*STVWIL
Trigger: CAAAATCCACACAGTGGAGCACATGATCAGCCCCAT...GTGACATGGCCAATTAAGTATCAGTGAGCCTCCTATCTGGGACTTATCTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR GCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGCTGGCTGGGTCTGGCTaGACAGCAATGGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKLAGSG*TAMGLI
Trigger: GATCAGCCCCATTGCTGTGCAGCCAGACCCAGCCAG...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTAGTTCACCCATCAAGTaGACAGCAAAGGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLASSPIK*TAKEER
Trigger: CCTCTCTTCCTTTGCTGTGCACTTGATGGGTGAACT...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATTCCTCCTCCTGGATGTaGACACCCCAATCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHSSSWM*TPQSSS
Trigger: TGAACTGGATTGGGGTGTGCACATCCAGGAGGAGGA...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCCCGAGTCACTGCTCATaGCTGCGGTGGAATCCTCTG +
Preference number: 4 (lower is better)
Translates to: VSYATRLKPCAYSATENSPSHCS*LRWNPL
Trigger: CAGAGGATTCCACCGCAGCCATGAGCAGTGACTCGG...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTTCTTGTCGGCCGCGCTaGCGTAGACGATCACGTCCA +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSSCRPR*RRRSRP
Trigger: TGGACGTGATCGTCTACGCCAGCGCGGCCGACAAGA...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTACAGTCCACGGCGATCTaGTGGCCCCACAGCTGGATG +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLQSTAI*WPHSWM
Trigger: CATCCAGCTGTGGGGCCACCAGATCGCCGTGGACTG...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAAGGAGTACACGTAGCTaGGCTGCTGCGCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKRSTRS*AAALPQ
Trigger: CTGAGGCAGCGCAGCAGCCCAGCTACGTGTACTCCT...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGAGGGGCTGGAGCTGCTaGAAACATGGAATACTGAGC +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLRGWSC*KHGILS
Trigger: GCTCAGTATTCCATGTTTCCAGCAGCTCCAGCCCCT...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAGGGGCTGGAGCTGCTaGAAACATGGAATACTGAGC +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLRGWSC*KHGILS
Trigger: GCTCAGTATTCCATGTTTCCAGCAGCTCCAGCCCCT...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGAGCACTGGCTGGGTCTaGCTGCACAGCAATGGGGCT +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKSTGWV*LHSNGA
Trigger: AGCCCCATTGCTGTGCAGCCAGACCCAGCCAGTGCT...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGGTATACTGGAGTTATTaGGCGGCCCTGGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLVYWSY*AALERW
Trigger: CCACCTTTCCAGGGCCGCCCAATAACTCCAGTATAC...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGAAATTCTCTGAACGTTTaGAGCCACCGTGTATACTGG +
Preference number: 4 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGNSLNV*SHRVYW
Trigger: CCAGTATACACGGTGGCTCCAAACGTTCAGAGAATT...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGGATCGTGGCTGTAGCTaGAGCAGCAAATGGCACGTA +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLDRGCS*SSKWHV
Trigger: TACGTGCCATTTGCTGCTCCAGCTACAGCCACGATC...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAGGTAGACGTCGGGGATaGGGACCTGAATGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKGRRRG*GPEWQQ
Trigger: CTGCTGCCATTCAGGTCCCCATCCCCGACGTCTACC...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTGGTCTGTCTTCGTGCTaGTCACCAGCCTCAGTATGT +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRGLSSC*SPASVC
Trigger: ACATACTGAGGCTGGTGACCAGCACGAAGACAGACC...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GGAACAGATAAGTCCCAGATAGGAGGCTCACTGATACTTAATTGGCCATGTCACCAAGCGTTCCTTCAGTaGTGTTTGTGTGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GTDKSQIGGSLILNWPCHQAFLQ*CLCGLS
Trigger: AGACAGACCACACAAACACCACTGAAGGAACGCTTG...GTGACATGGCCAATTAAGTATCAGTGAGCCTCCTATCTGGGACTTATCTGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACAACATTGCGGTGGGATTaGGAATCTGGGGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QVHSKGREAHLINIMFPTTLRWD*ESGEEG
Trigger: CCCCTCCTCCCCAGATTCCCAATCCCACCGCAATGT...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCTCACTGATACTTAATTaGCCATGTCACCAATGTTTG +
Preference number: 4 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSSLILN*PCHQCL
Trigger: CAAACATTGGTGACATGGCCAATTAAGTATCAGTGA...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CCA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGCCCTTCAAAAACCATaGCTCAGTGCTTTTGGTAAA +
Preference number: 4 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVALQKP*LSAFGK
Trigger: TTTACCAAAAGCACTGAGCCATGGTTTTTGAAGGGC...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381793.6
CDS-3UTR CCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTCCTCCCACACTCTaGCAACGGAATGCCCTTCAA +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLSPPTL*QRNALQ
Trigger: TTGAAGGGCATTCCGTTGCCAGAGTGTGGGAGGAGA...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381793.6
3UTR CAA 72 bp TTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTaGTGTGGTCTGTCTTCGTGCTGGTCACCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: FFINSQAFLQWC*CGLSSCWSPAS
Trigger: TGAGGCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR TCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGGGATCTCGTAGTTGTTaGGCTCACGCACTGCGCGCT +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKGSRSC*AHALRA
Trigger: AGCGCGCAGTGCGTGAGCTCAACAACTACGAGATCC...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTGGATCTCGTAGTTGTTaGGCTCACGCACTGCGCGCT +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSGSRSC*AHALRA
Trigger: AGCGCGCAGTGCGTGAGCTCAACAACTACGAGATCC...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCGGTGGTCTCGATCATaGGGTTGCGCACGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSRWSRS*GCARRG
Trigger: TCCTCTACGTGCGCAACCTCATGATCGAGACCACCG...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGGGCCGAAGCTCTTCTTaGTGGTGTCCTCGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKGRSSS*WCPRWS
Trigger: AGACCACCGAGGACACCATCAAGAAGAGCTTCGGCC...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAGGCCGAAGCTCTTCTTaGTGGTGTCCTCGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKGRSSS*WCPRWS
Trigger: AGACCACCGAGGACACCATCAAGAAGAGCTTCGGCC...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGGCAGTAGGAATTCTCTaGACGTTTGGAGCCACCGTG +
Preference number: 4 (lower is better)
Translates to: HSKGREAHLINIMFPTPLAVGIL*TFGATV
Trigger: CACGGTGGCTCCAAACGTTCAGAGAATTCCTACTGC...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTAGCATAACTTTCTGCTaGAAAGAGTCTCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: KESFPVFGLRSAASLFNVSITFC*KESLGV
Trigger: GACCCCCAGAGACTCTTTTCAGCAGAAAGTTATGCT...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp GGAACAGATAAGTCCCAGATAGGAGGCTCACTGATACTTAATTGGCCATGTCACGGCATGATCCTCTTATaGATCCACAAGAATTCAGCC +
Preference number: 4 (lower is better)
Translates to: GTDKSQIGGSLILNWPCHGMILL*IHKNSA
Trigger: GGCTGAATTCTTGTGGATTCATAAGAGGATCATGCC...GTGACATGGCCAATTAAGTATCAGTGAGCCTCCTATCTGGGACTTATCTGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR TCA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGCAGGGGATGAGGATCTaGTCCGAATTACATTTTGTC +
Preference number: 4 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMQGMRI*SELHFV
Trigger: GACAAAATGTAATTCGGATCAGATCCTCATCCCCTG...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGCACACAGTCAGGGGATaGGGATCTGATCCGAATTAC +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLHTVRG*GSDPNY
Trigger: GTAATTCGGATCAGATCCTCATCCCCTGACTGTGTG...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGGGACTAAAGGGCAATTaGCCTCACTCCTCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQAGLKGN*PHSSWV
Trigger: GACCCAGGAGGAGTGAGGTCAATTGCCCTTTAGTCC...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381795.10
CDS-3UTR GCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCGTTCTCTTGCACCATaGTGTAGCCCGTGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSRSLAP*CSPCAP
Trigger: TGGAGCGCACGGGCTACAGCATGGTGCAAGAGAACG...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTACCGCCGTACTTGCGCTaGCCGTTCTCTTGCACCATG +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLPPYLR*PFSCTM
Trigger: CATGGTGCAAGAGAACGGGCAGCGCAAGTACGGCGG...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCCTGGCTGGGTCTGGCTaGACAGCAATGGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVLAGSG*TAMGLI
Trigger: GATCAGCCCCATTGCTGTGCAGCCAGACCCAGCCAG...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTCTGAGGTATGTAGCCTaGGTATCCTCCATACATGGC +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRLRYVA*VSSIHG
Trigger: GCCATGTATGGAGGATACGCAGGCTACATACCTCAG...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATAGGCTTGCCAAACATTaGGGTGGGATTGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHRLAKH*GGIGNL
Trigger: CAGATTCCCAATCCCACCGCAATGTTTGGCAAGCCT...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTAGGCTTGCCAAACATTaGGGTGGGATTGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRRLAKH*GGIGNL
Trigger: CAGATTCCCAATCCCACCGCAATGTTTGGCAAGCCT...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCCATCAGCGCCAGCAGTaGTGCCTCCTCAGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVHQRQQ*CLLSEP
Trigger: TGGCTCACTGAGGAGGCAGCACTGCTGGCGCTGATG...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514014.1
CDS-3UTR CCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCCGAGTCACTGCTCATaGCTGCGGTGGAATCCTCTG +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSPSHCS*LRWNPL
Trigger: CAGAGGATTCCACCGCAGCCATGAGCAGTGACTCGG...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCCAGCCGGGGTTGAACTaGCCGAAGCTCTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: VSYATRLKPCAYSATENSQPGLN*PKLFLM
Trigger: CATCAAGAAGAGCTTCGGCCAGTTCAACCCCGGCTG...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGCAGCCGGGGTTGAACTaGCCGAAGCTCTTCTTGATG +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQAQPGLN*PKLFLM
Trigger: CATCAAGAAGAGCTTCGGCCAGTTCAACCCCGGCTG...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGAATACTGAGCCCCAATaGCAGGGATGGCTACTGTAC +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLNTEPQ*QGWLLY
Trigger: GTACAGTAGCCATCCCTGCCATTGGGGCTCAGTATT...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATGAGCTGCTGGAAACATaGAATACTGAGCCCCAATGG +
Preference number: 4 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHELLET*NTEPQW
Trigger: CCATTGGGGCTCAGTATTCCATGTTTCCAGCAGCTC...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGGAGCTGCTGGAAACATaGAATACTGAGCCCCAATGG +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLELLET*NTEPQW
Trigger: CCATTGGGGCTCAGTATTCCATGTTTCCAGCAGCTC...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGAGGGGCTGGAGCTGCTaGAAACATGGAATACTGAGC +
Preference number: 4 (lower is better)
Translates to: HSKGREAHLINIMFPTPLRGWSC*KHGILS
Trigger: GCTCAGTATTCCATGTTTCCAGCAGCTCCAGCCCCT...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGCAAATGGCACGTAACTaGCCCCGTAGATCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKQMARN*PRRSRQ
Trigger: CTGCCGGGATCTACGGGGCCAGTTACGTGCCATTTG...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTAGGTAGACGTCGGGGATaGGGACCTGAATGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLGRRRG*GPEWQQ
Trigger: CTGCTGCCATTCAGGTCCCCATCCCCGACGTCTACC...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCGTGGGATTGGGAATCTaGGGAGGAGGGGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVVGLGI*GGGDRV
Trigger: CACCCTGTCCCCTCCTCCCCAGATTCCCAATCCCAC...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAACATTGCGGTGGGATTaGGAATCTGGGGAGGAGGGG +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKTLRWD*ESGEEG
Trigger: CCCCTCCTCCCCAGATTCCCAATCCCACCGCAATGT...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGATCCTGCTAAGCACCTaGCGCTCTCTTTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: HSKGREAHLINIMFPTPLILLST*RSLSLL
Trigger: AAGCAGGGAAAGAGAGCGCCAGGTGCTTAGCAGGAT...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381793.6
CDS-3UTR CCA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGAGTCTTAATTGCAGGTaGCTACACCTTTGCTCTTTA +
Preference number: 4 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVSLNCR*LHLCSL
Trigger: TAAAGAGCAAAGGTGTAGCCACCTGCAATTAAGACT...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR TCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTACGGTGGTCTCGATCATaGGGTTGCGCACGTAGAGGA +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLRWSRS*GCARRG
Trigger: TCCTCTACGTGCGCAACCTCATGATCGAGACCACCG...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGCCAGCTCAGTGCCGTTaGGGTTGTTCATGGCATGCA +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKPAQCR*GCSWHA
Trigger: TGCATGCCATGAACAACCTCAACGGCACTGAGCTGG...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGTTTCCTTTCCCTTCATaGTATCGGCTATATATACCA +
Preference number: 4 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVFPFPS*YRLYIP
Trigger: TGGTATATATAGCCGATATCATGAAGGGAAAGGAAA...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
CDS-3UTR TCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTGCACAGCAATGGGGCTaGTCATGTGCTCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSAQQWG*SCAPLC
Trigger: ACACAGTGGAGCACATGATCAGCCCCATTGCTGTGC...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAGCACAGCAATGGGGCTaGTCATGTGCTCCACTGTGT +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKAQQWG*SCAPLC
Trigger: ACACAGTGGAGCACATGATCAGCCCCATTGCTGTGC...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATAGCATAACTTTCTGCTaGAAAGAGTCTCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHSITFC*KESLGV
Trigger: GACCCCCAGAGACTCTTTTCAGCAGAAAGTTATGCT...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACTACTTGCTAAGGGCATaGTCCTCTTATGAATCCACA +
Preference number: 4 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHYLLRA*SSYEST
Trigger: TGTGGATTCATAAGAGGATCATGCCCTTAGCAAGTA...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCACACACAGTCAGGGGATaGGGATCTGATCCGAATTAC +
Preference number: 4 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSHTVRG*GSDPNY
Trigger: GTAATTCGGATCAGATCCTCATCCCCTGACTGTGTG...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCCGTTCTCTTGCACCATaGTGTAGCCCGTGCGCTCCA +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVRSLAP*CSPCAP
Trigger: TGGAGCGCACGGGCTACAGCATGGTGCAAGAGAACG...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGGCCTCTTATGCTGCCTaGTTTCACAAAGTAGTCCCT +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLASYAA*FHKVVP
Trigger: AGGGACTACTTTGTGAAAGCAGGCAGCATAAGAGGC...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000514014.1
CDS-3UTR GCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGCTCGGCCTCTTATGCTaGCTGCTTTCACAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLLGLLC*LLSQSS
Trigger: ACTACTTTGTGAAAGCAGGCAGCATAAGAGGCCGAG...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000514014.1
CDS-3UTR GCA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCTGTGGTCTGTCTTCGTaGTGGTCACCAGCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: VSYATRLKPCAYSATENSCGLSS*WSPASV
Trigger: TACTGAGGCTGGTGACCAGCACGAAGACAGACCACA...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGAGAAGGCACGAACCATTaGAAGTCTTTTGGAAATGTA +
Preference number: 4 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGEGTNH*KSFGNV
Trigger: TACATTTCCAAAAGACTTGCAATGGTTCGTGCCTTC...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATAGTTCACCCATCAAGTaGACAGCAAAGGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHSSPIK*TAKEER
Trigger: CCTCTCTTCCTTTGCTGTGCACTTGATGGGTGAACT...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAGTTCACCCATCAAGTaGACAGCAAAGGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLSSPIK*TAKEER
Trigger: CCTCTCTTCCTTTGCTGTGCACTTGATGGGTGAACT...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATTGGCCTCGTGCTTGTaGCAGTACATGACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKLASCL*QYMTKA
Trigger: CGCCTTCGTCATGTACTGCCACAAGCACGAGGCCAA...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTAAGGTTTAATGGCAACTaGGTTGACGGTAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: FVESLIPTDLSLNAACGVRFNGN*VDGRDF
Trigger: GAAATCCCTACCGTCAACCCAGTTGCCATTAAACCT...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
CDS-3UTR CCA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTGAGCTGCTGGAAACATaGAATACTGAGCCCCAATGG +
Preference number: 4 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVELLET*NTEPQW
Trigger: CCATTGGGGCTCAGTATTCCATGTTTCCAGCAGCTC...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CCA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCAGGGGCTGGAGCTGCTaGAAACATGGAATACTGAGC +
Preference number: 4 (lower is better)
Translates to: VSYATRLKPCAYSATENSRGWSC*KHGILS
Trigger: GCTCAGTATTCCATGTTTCCAGCAGCTCCAGCCCCT...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAAGCCACCGTGTATACTaGAGTTATTGGGCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKSHRVY*SYWAAL
Trigger: CAGGGCCGCCCAATAACTCCAGTATACACGGTGGCT...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACAGATCGTGGCTGTAGCTaGAGCAGCAAATGGCACGTA +
Preference number: 4 (lower is better)
Translates to: QVHSKGREAHLINIMFPTDRGCS*SSKWHV
Trigger: TACGTGCCATTTGCTGCTCCAGCTACAGCCACGATC...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGGATCGTGGCTGTAGCTaGAGCAGCAAATGGCACGTA +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQADRGCS*SSKWHV
Trigger: TACGTGCCATTTGCTGCTCCAGCTACAGCCACGATC...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCGGTCTGTCTTCGTGCTaGTCACCAGCCTCAGTATGT +
Preference number: 4 (lower is better)
Translates to: VSYATRLKPCAYSATENSGLSSC*SPASVC
Trigger: ACATACTGAGGCTGGTGACCAGCACGAAGACAGACC...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTGAGCTTTCCAGTGTTTaGACTCAGAAGTGCGGCAAG +
Preference number: 4 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVELSSV*TQKCGK
Trigger: CTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTC...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CCA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAATACTGAGCCCCAATaGCAGGGATGGCTACTTTCA +
Preference number: 4 (lower is better)
Translates to: ARTIASLLEMYERRHAKLNTEPQ*QGWLLS
Trigger: TGAAAGTAGCCATCCCTGCCATTGGGGCTCAGTATT...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381795.10
CDS-3UTR TCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCCGTCAAAGTCCATCATaGGGCGCAGCTCGTAGATGC +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVRQSPS*GAARRC
Trigger: GCATCTACGAGCTGCGCCTCATGATGGACTTTGACG...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTGGAAACATGGAATACTaGGCCCCAATGGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSGNMEY*APMAGM
Trigger: CATCCCTGCCATTGGGGCTCAGTATTCCATGTTTCC...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGAGCATAACTTTCTGCTaGAAAGAGTCTCTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: HSKGREAHLINIMFPTPLSITFC*KESLGV
Trigger: GACCCCCAGAGACTCTTTTCAGCAGAAAGTTATGCT...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTTATGGATCTCTAACATaGCATAAAAACGCAACTGCG +
Preference number: 4 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLAYGSLT*HKNATA
Trigger: CGCAGTTGCGTTTTTATGTCATGTTAGAGATCCATA...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGCATAGTTTCATCCAGTaGAACTCTGTGACAATCCTT +
Preference number: 4 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMHSFIQ*NSVTIL
Trigger: AAGGATTGTCACAGAGTTTCACTGGATGAAACTATG...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp TTCATGATATCGGCTATATATACCACGACCAGCAGAATATCCCCCGAGGTAGGACATAGTTTCATCCAGTaGAACTCTGTGACAATCCTT +
Preference number: 4 (lower is better)
Translates to: FMISAIYTTTSRISPEVGHSFIQ*NSVTIL
Trigger: AAGGATTGTCACAGAGTTTCACTGGATGAAACTATG...TCCTACCTCGGGGGATATTCTGCTGGTCGTGGTATATATAGCCGATATCATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR TCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTGGCAAACTTGCAGGGTaGGTTTCTAGGATTGTATCT +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRGKLAG*VSRIVS
Trigger: AGATACAATCCTAGAAACTCACCCTGCAAGTTTGCC...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR GCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTTAACCTTGGAGACTTaGAGAGAGAAAGTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLLTLET*REKVSR
Trigger: CCTGGAGACTTTCTCTCTGCAAGTCTCCAAGGTTAA...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR GCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTGCCCTCGGCCTCTTATaGTGCCTGCTTTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSALGLL*CLLSQS
Trigger: ACTTTGTGAAAGCAGGCAGCATAAGAGGCCGAGGGC...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000514014.1
CDS-3UTR GCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTTGTGGTCTGTCTTCGTaGTGGTCACCAGCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSCGLSS*WSPASV
Trigger: TACTGAGGCTGGTGACCAGCACGAAGACAGACCACA...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp GGAACAGATAAGTCCCAGATAGGAGGCTCACTGATACTTAATTGGCCATGTCACTCTTCACTTTCAGGTTaGATGTGTGAATCCAACATG +
Preference number: 4 (lower is better)
Translates to: GTDKSQIGGSLILNWPCHSSLSG*MCESNM
Trigger: CATGTTGGATTCACACATGCAACCTGAAAGTGAAGA...GTGACATGGCCAATTAAGTATCAGTGAGCCTCCTATCTGGGACTTATCTGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR GCA 90 bp AAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGGTTTGGACTCAGAAGTaGGGCAAGTCTTTTCAATGT +
Preference number: 4 (lower is better)
Translates to: KYKSHQLLYQSYLSVLGLVWTQK*GKSFQC
Trigger: ACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAAC...CAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTGGTGGCTTTTATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGAGATTTGAGTTTGAATaGAGCTTGTGGGGTACATCA +
Preference number: 4 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMRFEFE*SLWGTS
Trigger: TGATGTACCCCACAAGCTGCATTCAAACTCAAATCT...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATaGAGCTTGTGGGGTACATCA +
Preference number: 4 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHRFEFE*SLWGTS
Trigger: TGATGTACCCCACAAGCTGCATTCAAACTCAAATCT...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGTTAACTCCCAGGCTCTaGGAATTCCAGTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQALTPRL*EFQWVR
Trigger: TCTGACCCACTGGAATTCCCAGAGCCTGGGAGTTAA...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR CCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTATTGGCCTCGTGCTTGTaGCAGTACATGACGAAGGCG +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLLASCL*QYMTKA
Trigger: CGCCTTCGTCATGTACTGCCACAAGCACGAGGCCAA...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGAGGTTTAATGGCAACTaGGTTGACGGTAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLRFNGN*VDGRDF
Trigger: GAAATCCCTACCGTCAACCCAGTTGCCATTAAACCT...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGGAGCTGCTGGAAACATaGAATACTGAGCCCCAATGG +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQAELLET*NTEPQW
Trigger: CCATTGGGGCTCAGTATTCCATGTTTCCAGCAGCTC...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATAATCATTTTAGGGGCTaGAGCTGCTGGAAACATGGA +
Preference number: 4 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHNHFRG*SCWKHG
Trigger: TCCATGTTTCCAGCAGCTCCAGCCCCTAAAATGATT...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTAATCATTTTAGGGGCTaGAGCTGCTGGAAACATGGA +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRNHFRG*SCWKHG
Trigger: TCCATGTTTCCAGCAGCTCCAGCCCCTAAAATGATT...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTGTATACTGGAGTTATTaGGCGGCCCTGGAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSVYWSY*AALERW
Trigger: CCACCTTTCCAGGGCCGCCCAATAACTCCAGTATAC...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTAAGCCACCGTGTATACTaGAGTTATTGGGCGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLSHRVY*SYWAAL
Trigger: CAGGGCCGCCCAATAACTCCAGTATACACGGTGGCT...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGAATTCTCTGAACGTTTaGAGCCACCGTGTATACTGG +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLNSLNV*SHRVYW
Trigger: CCAGTATACACGGTGGCTCCAAACGTTCAGAGAATT...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTAAGCTGGAGCAGCAAATaGCACGTAACTGGCCCCGTA +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLSWSSK*HVTGPV
Trigger: TACGGGGCCAGTTACGTGCCATTTGCTGCTCCAGCT...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAGATCGTGGCTGTAGCTaGAGCAGCAAATGGCACGTA +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKDRGCS*SSKWHV
Trigger: TACGTGCCATTTGCTGCTCCAGCTACAGCCACGATC...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGGGTCTGTCTTCGTGCTaGTCACCAGCCTCAGTATGT +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKGLSSC*SPASVC
Trigger: ACATACTGAGGCTGGTGACCAGCACGAAGACAGACC...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTGGTCTGTCTTCGTGCTaGTCACCAGCCTCAGTATGT +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSGLSSC*SPASVC
Trigger: ACATACTGAGGCTGGTGACCAGCACGAAGACAGACC...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCACAAGCGTTCCTTCAGTaGTGTTTGTGTGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSQAFLQ*CLCGLS
Trigger: AGACAGACCACACAAACACCACTGAAGGAACGCTTG...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGGAGCTTTCCAGTGTTTaGACTCAGAAGTGCGGCAAG +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQAELSSV*TQKCGK
Trigger: CTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTC...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp AAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGTTTGAATGCAGCTTGTaGGGTACATCATCAGGAACA +
Preference number: 4 (lower is better)
Translates to: KYKSHQLLYQSYLSVLGLFECSL*GTSSGT
Trigger: TGTTCCTGATGATGTACCCCACAAGCTGCATTCAAA...CAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTGGTGGCTTTTATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGAGTTTTTAAGGGAGTTTaGTGGTTGCCATGTTATCAT +
Preference number: 4 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGVFKGV*WLPCYH
Trigger: ATGATAACATGGCAACCACCAAACTCCCTTAAAAAC...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CCA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCACCCCAATGGCAGGGATaGCTACTTTCACAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSPQWQG*LLSQSS
Trigger: ACTACTTTGTGAAAGTAGCCATCCCTGCCATTGGGG...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381795.10
CDS-3UTR TCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTTTTCCTTTCCCTTCATaGTATCGGCTATATATACCA +
Preference number: 4 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLAFPFPS*YRLYIP
Trigger: TGGTATATATAGCCGATATCATGAAGGGAAAGGAAA...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
CDS-3UTR TCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTTCAGGTTGCATGTGTaGATCCAACATGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLFRLHV*IQHVPS
Trigger: AGAAGGAACATGTTGGATTCACACATGCAACCTGAA...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTTACTTGCTAAGGGCATaGTCCTCTTATGAATCCACA +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRYLLRA*SSYEST
Trigger: TGTGGATTCATAAGAGGATCATGCCCTTAGCAAGTA...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCATTTTGCAGTGCCCTTTaGGGCAAATCCTTATGTGGA +
Preference number: 4 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSFCSAL*GKSLCG
Trigger: TCCACATAAGGATTTGCCTCAAAGGGCACTGCAAAA...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381795.10
CDS-3UTR TCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCATTTTAGTGCGCTCTaGCCTAGAGTTACGGAGGGT +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSHFSAL*PRVTEG
Trigger: ACCCTCCGTAACTCTAGGTCAGAGCGCACTAAAATG...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514014.1
CDS-3UTR GCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACAGCCTCTTATGCTGCCTaGTTTCACAAAGTAGTCCCT +
Preference number: 4 (lower is better)
Translates to: QVHSKGREAHLINIMFPTASYAA*FHKVVP
Trigger: AGGGACTACTTTGTGAAAGCAGGCAGCATAAGAGGC...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000381793.6
CDS-3UTR GCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCGCCCTCGGCCTCTTATaGTGCCTGCTTTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVALGLL*CLLSQS
Trigger: ACTTTGTGAAAGCAGGCAGCATAAGAGGCCGAGGGC...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000514014.1
CDS-3UTR GCA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCATGGGGCTGATCATGTaGTCCACTGTGTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: VSYATRLKPCAYSATENSMGLIM*STVWIL
Trigger: CAAAATCCACACAGTGGAGCACATGATCAGCCCCAT...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAACTGAGGTATGTAGCCTaGGTATCCTCCATACATGGC +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKLRYVA*VSSIHG
Trigger: GCCATGTATGGAGGATACGCAGGCTACATACCTCAG...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTATGTGGTCTGTCTTCGTaGTGGTCACCAGCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLCGLSS*WSPASV
Trigger: TACTGAGGCTGGTGACCAGCACGAAGACAGACCACA...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp AAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGGAAGGCACGAACCATTaGAAGTCTTTTGGAAATGTA +
Preference number: 4 (lower is better)
Translates to: KYKSHQLLYQSYLSVLGLEGTNH*KSFGNV
Trigger: TACATTTCCAAAAGACTTGCAATGGTTCGTGCCTTC...CAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTGGTGGCTTTTATACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTTGCAAAGGTGTCTTATaGAACTCGATTAAAACCTTG +
Preference number: 4 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLACKGVL*NSIKTL
Trigger: CAAGGTTTTAATCGAGTTGCATAAGACACCTTTGCA...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTCAACTGCGTTTTACTTaGTACCTTATTGCACACCTC +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRQLRFT*YLIAHL
Trigger: GAGGTGTGCAATAAGGTAGCAAGTAAAACGCAGTTG...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTTTAACTCCCAGGCTCTaGGAATTCCAGTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSLTPRL*EFQWVR
Trigger: TCTGACCCACTGGAATTCCCAGAGCCTGGGAGTTAA...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR CCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAAATACTGAGCCCCAATaGCAGGGATGGCTACTGTAC +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKNTEPQ*QGWLLY
Trigger: GTACAGTAGCCATCCCTGCCATTGGGGCTCAGTATT...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCGATCGTGGCTGTAGCTaGAGCAGCAAATGGCACGTA +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVDRGCS*SSKWHV
Trigger: TACGTGCCATTTGCTGCTCCAGCTACAGCCACGATC...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTACCATTGCAAGTCTTTTaGAAATGTATGAACGTAGGC +
Preference number: 4 (lower is better)
Translates to: FVESLIPTDLSLNAACGVPLQVF*KCMNVG
Trigger: GCCTACGTTCATACATTTCCAAAAGACTTGCAATGG...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGGTTTTTAAGGGAGTTTaGTGGTTGCCATGTTATCAT +
Preference number: 4 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMVFKGV*WLPCYH
Trigger: ATGATAACATGGCAACCACCAAACTCCCTTAAAAAC...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
3UTR CAA 72 bp GTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTaGTGGGGTACATCATCAGGAACATTGCACAATTAT +
Preference number: 4 (lower is better)
Translates to: VTHSHRFEFECS*WGTSSGTLHNY
Trigger: ATAATTGTGCAATGTTCCTGATGATGTACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTTTTCCTTTCCCTTCATaGTATCGGCTATATATACCA +
Preference number: 4 (lower is better)
Translates to: KESFPVFGLRSAASLFNVFPFPS*YRLYIP
Trigger: TGGTATATATAGCCGATATCATGAAGGGAAAGGAAA...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
CDS-3UTR TCA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATCATAGTTTCATCCAGTaGAACTCTGTGACAATCCTT +
Preference number: 4 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHHSFIQ*NSVTIL
Trigger: AAGGATTGTCACAGAGTTTCACTGGATGAAACTATG...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGCATAGTTTCATCCAGTaGAACTCTGTGACAATCCTT +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLHSFIQ*NSVTIL
Trigger: AAGGATTGTCACAGAGTTTCACTGGATGAAACTATG...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTGCCTCTTATGCTGCCTaGTTTCACAAAGTAGTCCCT +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSASYAA*FHKVVP
Trigger: AGGGACTACTTTGTGAAAGCAGGCAGCATAAGAGGC...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000514014.1
CDS-3UTR GCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTTTTAGGGGCTGGAGCTaGTGGAAACATGGAATACTG +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSFRGWS*WKHGIL
Trigger: CAGTATTCCATGTTTCCAGCAGCTCCAGCCCCTAAA...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAATGGGGCTGATCATGTaGTCCACTGTGTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKMGLIM*STVWIL
Trigger: CAAAATCCACACAGTGGAGCACATGATCAGCCCCAT...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCCTGAGGTATGTAGCCTaGGTATCCTCCATACATGGC +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVLRYVA*VSSIHG
Trigger: GCCATGTATGGAGGATACGCAGGCTACATACCTCAG...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATGAAGGCACGAACCATTaGAAGTCTTTTGGAAATGTA +
Preference number: 4 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHEGTNH*KSFGNV
Trigger: TACATTTCCAAAAGACTTGCAATGGTTCGTGCCTTC...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTGAAGGCACGAACCATTaGAAGTCTTTTGGAAATGTA +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSREGTNH*KSFGNV
Trigger: TACATTTCCAAAAGACTTGCAATGGTTCGTGCCTTC...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGGAAGGCACGAACCATTaGAAGTCTTTTGGAAATGTA +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLEGTNH*KSFGNV
Trigger: TACATTTCCAAAAGACTTGCAATGGTTCGTGCCTTC...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGGTTTGGACTCAGAAGTaGGGCAAGTCTTTTCAATGT +
Preference number: 4 (lower is better)
Translates to: HSKGREAHLINIMFPTPLVWTQK*GKSFQC
Trigger: ACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAAC...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATAGATTTGAGTTTGAATaGAGCTTGTGGGGTACATCA +
Preference number: 4 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHRFEFE*SLWGTS
Trigger: TGATGTACCCCACAAGCTGCATTCAAACTCAAATCT...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGAGATTTGAGTTTGAATaGAGCTTGTGGGGTACATCA +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLRFEFE*SLWGTS
Trigger: TGATGTACCCCACAAGCTGCATTCAAACTCAAATCT...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAACTCTGGCAACGGAATaGCCTTCAAAAACCATGGCT +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKTLATE*PSKTMA
Trigger: AGCCATGGTTTTTGAAGGGCATTCCGTTGCCAGAGT...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381793.6
CDS-3UTR GCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGCTCGGCCTCTTATGCTaGCTGCTTGTAATAACAACA +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQALGLLC*LLVITT
Trigger: TGTTGTTATTACAAGCAGGCAGCATAAGAGGCCGAG...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGCAAGCGTTCCTTCAGTaGTGTTTGTGTGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKQAFLQ*CLCGLS
Trigger: AGACAGACCACACAAACACCACTGAAGGAACGCTTG...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAACAAGCGTTCCTTCAGTaGTGTTTGTGTGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKQAFLQ*CLCGLS
Trigger: AGACAGACCACACAAACACCACTGAAGGAACGCTTG...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTCCATTGCAAGTCTTTTaGAAATGTATGAACGTAGGC +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRPLQVF*KCMNVG
Trigger: GCCTACGTTCATACATTTCCAAAAGACTTGCAATGG...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGCCATTGCAAGTCTTTTaGAAATGTATGAACGTAGGC +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLPLQVF*KCMNVG
Trigger: GCCTACGTTCATACATTTCCAAAAGACTTGCAATGG...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp GGAACAGATAAGTCCCAGATAGGAGGCTCACTGATACTTAATTGGCCATGTCACTTTAAGGGAGTTTGGTaGTTGCCATGTTATCATTTT +
Preference number: 4 (lower is better)
Translates to: GTDKSQIGGSLILNWPCHFKGVW*LPCYHF
Trigger: AAAATGATAACATGGCAACCACCAAACTCCCTTAAA...GTGACATGGCCAATTAAGTATCAGTGAGCCTCCTATCTGGGACTTATCTGTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR TCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTATTTTGCAGTGCCCTTTaGGGCAAATCCAAACCTCCT +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLFCSAL*GKSKPP
Trigger: AGGAGGTTTGGATTTGCCTCAAAGGGCACTGCAAAA...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR TCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTTTGCAGTGCCCTTTaGGGCAAATCCAAACCTCCT +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVFCSAL*GKSKPP
Trigger: AGGAGGTTTGGATTTGCCTCAAAGGGCACTGCAAAA...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR TCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGTTCAGGTTGCATGTGTaGATCCAACATGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQAFRLHV*IQHVPS
Trigger: AGAAGGAACATGTTGGATTCACACATGCAACCTGAA...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR TCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTATGTTTCCAACACCCTTaGGGACCATGGACAGTTTTG +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLCFQHP*GPWTVL
Trigger: CAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACA...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCATATGGATCTCTAACATaGCATAAAAACGCAACTGCG +
Preference number: 4 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSYGSLT*HKNATA
Trigger: CGCAGTTGCGTTTTTATGTCATGTTAGAGATCCATA...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTTCAACAAAAATCCCGTaGGTGGAAAATTGTATGGAT +
Preference number: 4 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRSTKIP*VENCMD
Trigger: ATCCATACAATTTTCCACTCACGGGATTTTTGTTGA...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAGGCATGATCCTCTTATaGATCCACAAGAATTCAGCC +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKGMILL*IHKNSA
Trigger: GGCTGAATTCTTGTGGATTCATAAGAGGATCATGCC...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGTACTTGCTAAGGGCATaGTCCTCTTATGAATCCACA +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQAYLLRA*SSYEST
Trigger: TGTGGATTCATAAGAGGATCATGCCCTTAGCAAGTA...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAACAGGGGATGAGGATCTaGTCCGAATTACATTTTGTC +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKQGMRI*SELHFV
Trigger: GACAAAATGTAATTCGGATCAGATCCTCATCCCCTG...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTACTCGGCCTCTTATGCTaGCTGCTTTCACAAAGTAGT +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLLGLLC*LLSQSS
Trigger: ACTACTTTGTGAAAGCAGGCAGCATAAGAGGCCGAG...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000514014.1
CDS-3UTR GCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCATGGGGCTGATCATGTaGTCCACTGTGTGGATTTTG +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVMGLIM*STVWIL
Trigger: CAAAATCCACACAGTGGAGCACATGATCAGCCCCAT...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCATCTTCACTTTCAGGTTaGATGTGTGAATCCAACATG +
Preference number: 4 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSSSLSG*MCESNM
Trigger: CATGTTGGATTCACACATGCAACCTGAAAGTGAAGA...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTGCAAAGGTGTCTTATaGAACTCGATTAAAACCTTG +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLCKGVL*NSIKTL
Trigger: CAAGGTTTTAATCGAGTTGCATAAGACACCTTTGCA...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGCAACTGCGTTTTACTTaGTACCTTATTGCACACCTC +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQAQLRFT*YLIAHL
Trigger: GAGGTGTGCAATAAGGTAGCAAGTAAAACGCAGTTG...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCCAACTGCGTTTTACTTaGTACCTTATTGCACACCTC +
Preference number: 4 (lower is better)
Translates to: VSYATRLKPCAYSATENSQLRFT*YLIAHL
Trigger: GAGGTGTGCAATAAGGTAGCAAGTAAAACGCAGTTG...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATTCTCGGCATTTAACTaGCCCAGTCTTAATTGCAGG +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKFSAFN*PSLNCR
Trigger: CCTGCAATTAAGACTGGGGCAGTTAAATGCCGAGAA...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CCA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCTCCTTGTTAAGTTTTTaGAGCCGCCCACTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: VSYATRLKPCAYSATENSSLLSF*SRPLQK
Trigger: TTTCTGAAGTGGGCGGCTCCAAAAACTTAACAAGGA...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR CCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTAATCATTTTAGGGGCTaGAGCTGCTGGAAACATGGA +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSNHFRG*SCWKHG
Trigger: TCCATGTTTCCAGCAGCTCCAGCCCCTAAAATGATT...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGAATTCTCTGAACGTTTaGAGCCACCGTGTATACTGG +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKNSLNV*SHRVYW
Trigger: CCAGTATACACGGTGGCTCCAAACGTTCAGAGAATT...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAAATTCTCTGAACGTTTaGAGCCACCGTGTATACTGG +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKNSLNV*SHRVYW
Trigger: CCAGTATACACGGTGGCTCCAAACGTTCAGAGAATT...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTACAAGCGTTCCTTCAGTaGTGTTTGTGTGGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLQAFLQ*CLCGLS
Trigger: AGACAGACCACACAAACACCACTGAAGGAACGCTTG...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACATTTGAATGCAGCTTGTaGGGTACATCATCAGGAACA +
Preference number: 4 (lower is better)
Translates to: QVHSKGREAHLINIMFPTFECSL*GTSSGT
Trigger: TGTTCCTGATGATGTACCCCACAAGCTGCATTCAAA...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTACTGCTCGTTCAGAAGTaGCTCATTTTAGTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLLLVQK*LILVRS
Trigger: AGAGCGCACTAAAATGAGCCACTTCTGAACGAGCAG...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514014.1
CDS-3UTR TCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGTATGGATCTCTAACATaGCATAAAAACGCAACTGCG +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQAYGSLT*HKNATA
Trigger: CGCAGTTGCGTTTTTATGTCATGTTAGAGATCCATA...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACATATGGATCTCTAACATaGCATAAAAACGCAACTGCG +
Preference number: 4 (lower is better)
Translates to: QVHSKGREAHLINIMFPTYGSLT*HKNATA
Trigger: CGCAGTTGCGTTTTTATGTCATGTTAGAGATCCATA...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTTCAACAAAAATCCCGTaGGTGGAAAATTGTATGGAT +
Preference number: 4 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVSTKIP*VENCMD
Trigger: ATCCATACAATTTTCCACTCACGGGATTTTTGTTGA...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR TCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTAGGCATGATCCTCTTATaGATCCACAAGAATTCAGCC +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLGMILL*IHKNSA
Trigger: GGCTGAATTCTTGTGGATTCATAAGAGGATCATGCC...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGTACTTGCTAAGGGCATaGTCCTCTTATGAATCCACA +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKYLLRA*SSYEST
Trigger: TGTGGATTCATAAGAGGATCATGCCCTTAGCAAGTA...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGTCTTCACTTTCAGGTTaGATGTGTGAATCCAACATG +
Preference number: 4 (lower is better)
Translates to: FQVACVNPTCSFFINSQASSLSG*MCESNM
Trigger: CATGTTGGATTCACACATGCAACCTGAAAGTGAAGA...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAGTTTGGACTCAGAAGTaGGGCAAGTCTTTTCAATGT +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKVWTQK*GKSFQC
Trigger: ACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAAC...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR GCA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCATGCAAAGGTGTCTTATaGAACTCGATTAAAACCTTG +
Preference number: 4 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSCKGVL*NSIKTL
Trigger: CAAGGTTTTAATCGAGTTGCATAAGACACCTTTGCA...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTTTCAGGCAGCTTCCTTaGGATTCCTCTGTTCAATTT +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSFRQLP*DSSVQF
Trigger: AAATTGAACAGAGGAATCCCAAGGAAGCTGCCTGAA...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCAATCATTTTAGGGGCTaGAGCTGCTGGAAACATGGA +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVNHFRG*SCWKHG
Trigger: TCCATGTTTCCAGCAGCTCCAGCCCCTAAAATGATT...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCAATTCTCTGAACGTTTaGAGCCACCGTGTATACTGG +
Preference number: 4 (lower is better)
Translates to: IASLLEMYERRHAKLKIVNSLNV*SHRVYW
Trigger: CCAGTATACACGGTGGCTCCAAACGTTCAGAGAATT...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCATTGCAAGTCTTTTaGAAATGTATGAACGTAGGC +
Preference number: 4 (lower is better)
Translates to: QVHSKGREAHLINIMFPTPLQVF*KCMNVG
Trigger: GCCTACGTTCATACATTTCCAAAAGACTTGCAATGG...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTTTTGAATGCAGCTTGTaGGGTACATCATCAGGAACA +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSFECSL*GTSSGT
Trigger: TGTTCCTGATGATGTACCCCACAAGCTGCATTCAAA...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTTTAAGGGAGTTTGGTaGTTGCCATGTTATCATTTT +
Preference number: 4 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLFKGVW*LPCYHF
Trigger: AAAATGATAACATGGCAACCACCAAACTCCCTTAAA...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CCA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCATCACTGATACTTAATTaGCCATGTCACCAATGTTTG +
Preference number: 4 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSSLILN*PCHQCL
Trigger: CAAACATTGGTGACATGGCCAATTAAGTATCAGTGA...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR GCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATCTTCACTTTCAGGTTaGATGTGTGAATCCAACATG +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKSSLSG*MCESNM
Trigger: CATGTTGGATTCACACATGCAACCTGAAAGTGAAGA...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTTCTTCACTTTCAGGTTaGATGTGTGAATCCAACATG +
Preference number: 4 (lower is better)
Translates to: LHFQVACVNPTCSFFINSSSLSG*MCESNM
Trigger: CATGTTGGATTCACACATGCAACCTGAAAGTGAAGA...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR GCA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACATGCAAAGGTGTCTTATaGAACTCGATTAAAACCTTG +
Preference number: 4 (lower is better)
Translates to: QVHSKGREAHLINIMFPTCKGVL*NSIKTL
Trigger: CAAGGTTTTAATCGAGTTGCATAAGACACCTTTGCA...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTATTCAGGCAGCTTCCTTaGGATTCCTCTGTTCAATTT +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLFRQLP*DSSVQF
Trigger: AAATTGAACAGAGGAATCCCAAGGAAGCTGCCTGAA...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTATTTGAATGCAGCTTGTaGGGTACATCATCAGGAACA +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLFECSL*GTSSGT
Trigger: TGTTCCTGATGATGTACCCCACAAGCTGCATTCAAA...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCATTTAAGGGAGTTTGGTaGTTGCCATGTTATCATTTT +
Preference number: 4 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSFKGVW*LPCYHF
Trigger: AAAATGATAACATGGCAACCACCAAACTCCCTTAAA...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR TCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATCAACAAAAATCCCGTaGGTGGAAAATTGTATGGAT +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKSTKIP*VENCMD
Trigger: ATCCATACAATTTTCCACTCACGGGATTTTTGTTGA...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR TCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGTCAACAAAAATCCCGTaGGTGGAAAATTGTATGGAT +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKSTKIP*VENCMD
Trigger: ATCCATACAATTTTCCACTCACGGGATTTTTGTTGA...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CCA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGGTTTTTAAGGGAGTTTaGTGGTTGCCATGTTATCAT +
Preference number: 4 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKVFKGV*WLPCYH
Trigger: ATGATAACATGGCAACCACCAAACTCCCTTAAAAAC...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CCA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAAGGCAAATCCTTATGTaGATGGGTTCCATCTTATTT +
Preference number: 4 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKRQILM*MGSILF
Trigger: AAATAAGATGGAACCCATCCACATAAGGATTTGCCT...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381795.10
CDS-3UTR TCA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTATTTCCTTTCCCTTCATaGTATCGGCTATATATACCA +
Preference number: 4 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLFPFPS*YRLYIP
Trigger: TGGTATATATAGCCGATATCATGAAGGGAAAGGAAA...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
ENST00000514014.1
3UTR CAA 72 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTaGTCCCTACAAACTCATACTTCAAAAATGAATAAA +
Preference number: 4 (lower is better)
Translates to: VSGGLVYDNIHS*SLQTHTSKMNK
Trigger: TTTATTCATTTTTGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS GCA 90 bp TCGCGCGGGATCTTGCCCACGAAGACCTCGCAGCCACGCTGCGGGTaGGGGCCCTCCCAGCCGGGCGGTGGGCCGCCGTACTTGCGCTGC +
Preference number: 5 (lower is better)
Translates to: SRGILPTKTSQPRCG*GPSQPGGGPPYLRC
Trigger: GCAGCGCAAGTACGGCGGCCCACCGCCCGGCTGGGAGGGCCCGCACCCGCAGCGTGGCTGCGAGGTCTTCGTGGGCAAGATCCCGCGCGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000513473.5
ENST00000514014.1
ENST00000514782.5
ENST00000515053.5
CDS CCA 90 bp TGCTGTAGCCCGTGCGCTCCATCAGCGCCAGCAGTGCTGCCTCGTTaGGCGCGCCCGCCACGCCCTCGGGCACCTTGGCGGAGGACCCGG +
Preference number: 5 (lower is better)
Translates to: CCSPCAPSAPAVLPR*ARPPRPRAPWRRTR
Trigger: CCGGGTCCTCCGCCAAGGTGCCCGAGGGCGTGGCGGGCGCGCCCAACGAGGCAGCACTGCTGGCGCTGATGGAGCGCACGGGCTACAGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505220.1
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000511902.5
ENST00000513473.5
ENST00000514782.5
ENST00000515053.5
CDS GCA 90 bp GCTGCGGGTGCGGGCCCTCCCAGCCGGGCGGTGGGCCGCCGTACTTaGGCTGCCCGTTCTCTTGCACCATGCTGTAGCCCGTGCGCTCCA +
Preference number: 5 (lower is better)
Translates to: AAGAGPPSRAVGRRT*AARSLAPCCSPCAP
Trigger: TGGAGCGCACGGGCTACAGCATGGTGCAAGAGAACGGGCAGCGCAAGTACGGCGGCCCACCGCCCGGCTGGGAGGGCCCGCACCCGCAGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000513473.5
ENST00000514014.1
ENST00000514782.5
ENST00000515053.5
CDS CCA 90 bp GACCTCGCAGCCACGCTGCGGGTGCGGGCCCTCCCAGCCGGGCGGTaGGCCGCCGTACTTGCGCTGCCCGTTCTCTTGCACCATGCTGTA +
Preference number: 5 (lower is better)
Translates to: DLAATLRVRALPAGR*AAVLALPVLLHHAV
Trigger: TACAGCATGGTGCAAGAGAACGGGCAGCGCAAGTACGGCGGCCCACCGCCCGGCTGGGAGGGCCCGCACCCGCAGCGTGGCTGCGAGGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000513473.5
ENST00000514014.1
ENST00000514782.5
ENST00000515053.5
CDS GCA 90 bp CGAACACGGGCACCAGCTCGTCCTCGTACACGTCGCGCGGGATCTTaGCCACGAAGACCTCGCAGCCACGCTGCGGGTGCGGGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: RTRAPARPRTRRAGS*PRRPRSHAAGAGPP
Trigger: GGGAGGGCCCGCACCCGCAGCGTGGCTGCGAGGTCTTCGTGGGCAAGATCCCGCGCGACGTGTACGAGGACGAGCTGGTGCCCGTGTTCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000513473.5
ENST00000514014.1
ENST00000514782.5
ENST00000515053.5
CDS TCA 90 bp AGTCCACGGCGATCTGGTGGCCCCACAGCTGGATGCGGCCAGGCATaGGCTTGCGGCGAGCCATGGCAGCCGCGCGGTGGCTCTCGTACT +
Preference number: 5 (lower is better)
Translates to: SPRRSGGPTAGCGQA*ACGEPWQPRGGSRT
Trigger: AGTACGAGAGCCACCGCGCGGCTGCCATGGCTCGCCGCAAGCTCATGCCTGGCCGCATCCAGCTGTGGGGCCACCAGATCGCCGTGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS GCA 90 bp CGCCGTACTTGCGCTGCCCGTTCTCTTGCACCATGCTGTAGCCCGTaGGCTCCATCAGCGCCAGCAGTGCTGCCTCGTTGGGCGCGCCCG +
Preference number: 5 (lower is better)
Translates to: RRTCAARSLAPCCSP*APSAPAVLPRWARP
Trigger: CGGGCGCGCCCAACGAGGCAGCACTGCTGGCGCTGATGGAGCGCACGGGCTACAGCATGGTGCAAGAGAACGGGCAGCGCAAGTACGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505220.1
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000511902.5
ENST00000513473.5
ENST00000514782.5
ENST00000515053.5
CDS GCA 90 bp CGGGCGGTGGGCCGCCGTACTTGCGCTGCCCGTTCTCTTGCACCATaGTGTAGCCCGTGCGCTCCATCAGCGCCAGCAGTGCTGCCTCGT +
Preference number: 5 (lower is better)
Translates to: RAVGRRTCAARSLAP*CSPCAPSAPAVLPR
Trigger: ACGAGGCAGCACTGCTGGCGCTGATGGAGCGCACGGGCTACAGCATGGTGCAAGAGAACGGGCAGCGCAAGTACGGCGGCCCACCGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000513473.5
ENST00000514782.5
ENST00000515053.5
CDS GCA 90 bp CGGGCGGTGGGCCGCCGTACTTGCGCTGCCCGTTCTCTTGCACCATaGTGTAGCCCGTGCGCTCCATCAGCGCCAGCAGTGCTGCCTCCT +
Preference number: 5 (lower is better)
Translates to: RAVGRRTCAARSLAP*CSPCAPSAPAVLPP
Trigger: AGGAGGCAGCACTGCTGGCGCTGATGGAGCGCACGGGCTACAGCATGGTGCAAGAGAACGGGCAGCGCAAGTACGGCGGCCCACCGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514014.1
CDS CCA 90 bp ATCTCAGGTTCGGCCCAGTCCACGGCGATCTGGTGGCCCCACAGCTaGATGCGGCCAGGCATGAGCTTGCGGCGAGCCATGGCAGCCGCG +
Preference number: 5 (lower is better)
Translates to: ISGSAQSTAIWWPHS*MRPGMSLRRAMAAA
Trigger: CGCGGCTGCCATGGCTCGCCGCAAGCTCATGCCTGGCCGCATCCAGCTGTGGGGCCACCAGATCGCCGTGGACTGGGCCGAACCTGAGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS CCA 90 bp AGAGTCTCTTTCCAAGGCCTCCGTTACCTGAGCTGGGGCCGAGCATaGCTTGGCCGCGCGCAGGCAGGAGCGTCACGCGGACGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: RVSFQGLRYLSWGRA*LGRAQAGASRGRGP
Trigger: AGGGCCCCGTCCGCGTGACGCTCCTGCCTGCGCGCGGCCAAGCCATGCTCGGCCCCAGCTCAGGTAACGGAGGCCTTGGAAAGAGACTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000505220.1
ENST00000511598.5
ENST00000514014.1
CDS CCA 90 bp TCCTCGTCCACGTCGATCTCAGGTTCGGCCCAGTCCACGGCGATCTaGTGGCCCCACAGCTGGATGCGGCCAGGCATGAGCTTGCGGCGA +
Preference number: 5 (lower is better)
Translates to: SSSTSISGSAQSTAI*WPHSWMRPGMSLRR
Trigger: TCGCCGCAAGCTCATGCCTGGCCGCATCCAGCTGTGGGGCCACCAGATCGCCGTGGACTGGGCCGAACCTGAGATCGACGTGGACGAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS TCA 90 bp TGCAGCACACGCCGAGCAGGCGGCCCGGGCGGATCTCGTAGTTGTTaGGCTCACGCACTGCGCGCTTGGCCTCGTGCTTGTGGCAGTACA +
Preference number: 5 (lower is better)
Translates to: CSTRRAGGPGGSRSC*AHALRAWPRACGST
Trigger: TGTACTGCCACAAGCACGAGGCCAAGCGCGCAGTGCGTGAGCTCAACAACTACGAGATCCGCCCGGGCCGCCTGCTCGGCGTGTGCTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505414.5
ENST00000510871.5
ENST00000513473.5
ENST00000514014.1
ENST00000515053.5
CDS-3UTR CAA 90 bp CCATACATGGCGGCCGCGGCTGCCGCGTTCTTCTGTAGTGTGGCGATCGTGGCTTCACGCACTGCGCGCTaGGCCTCGTGCTTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: PYMAAAAAAFFCSVAIVASRTAR*ASCLWQ
Trigger: CTGCCACAAGCACGAGGCCAAGCGCGCAGTGCGTGA...AGCCACGATCGCCACACTACAGAAGAACGCGGCAGCCGCGGCCGCCATGTATGG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS GCA 90 bp GGGCACCTTGGCGGAGGACCCGGCGGCCGAGTCACTGCTCATGGCTaGGGTGGAATCCTCTGCGGTCATAATGTCAAAGGCATCCACAGC +
Preference number: 5 (lower is better)
Translates to: GHLGGGPGGRVTAHG*GGILCGHNVKGIHS
Trigger: GCTGTGGATGCCTTTGACATTATGACCGCAGAGGATTCCACCGCAGCCATGAGCAGTGACTCGGCCGCCGGGTCCTCCGCCAAGGTGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505220.1
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000511902.5
ENST00000513473.5
ENST00000514782.5
ENST00000515053.5
CDS GCA 90 bp GAGCAGGCGGCCCGGGCGGATCTCGTAGTTGTTGAGCTCACGCACTaGGCGCTTGGCCTCGTGCTTGTGGCAGTACATGACGAAGGCGTA +
Preference number: 5 (lower is better)
Translates to: EQAARADLVVVELTH*ALGLVLVAVHDEGV
Trigger: TACGCCTTCGTCATGTACTGCCACAAGCACGAGGCCAAGCGCGCAGTGCGTGAGCTCAACAACTACGAGATCCGCCCGGGCCGCCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505414.5
ENST00000510871.5
ENST00000513473.5
ENST00000514014.1
ENST00000515053.5
CDS GCA 90 bp CCAGGAGGACCGCTCCCCAAACCCTGGTTTCTCTCTATCCCAAGCTaGACATTCCACAGTGGAAAGCGGGAGCGGCGACCCGAAGGCAGC +
Preference number: 5 (lower is better)
Translates to: PGGPLPKPWFLSIPS*TFHSGKRERRPEGS
Trigger: GCTGCCTTCGGGTCGCCGCTCCCGCTTTCCACTGTGGAATGTGCAGCTTGGGATAGAGAGAAACCAGGGTTTGGGGAGCGGTCCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS TCA 90 bp TGTCGGCCGCGCTGGCGTAGACGATCACGTCCAGCACGCCCTCGGTaGCCTTGGCAATCTCCTCCAGGATTTCCTCGCGCTTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: CRPRWRRRSRPARPR*PWQSPPGFPRASSS
Trigger: AGATGAAGAAGCGCGAGGAAATCCTGGAGGAGATTGCCAAGGTCACCGAGGGCGTGCTGGACGTGATCGTCTACGCCAGCGCGGCCGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000513473.5
ENST00000514014.1
ENST00000515053.5
CDS-3UTR CAA 90 bp ACCAGCCTCAGTATGTCTGGTAGACGTCGGGGATGGGGACCTGAATGGCAGCAGGCGCTGCCCGTTCTCTaGCACCATGCTGTAGCCCGT +
Preference number: 5 (lower is better)
Translates to: TSLSMSGRRRGWGPEWQQALPVL*HHAVAR
Trigger: ACGGGCTACAGCATGGTGCAAGAGAACGGGCAGCGC...CTGCTGCCATTCAGGTCCCCATCCCCGACGTCTACCAGACATACTGAGGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS CCA 90 bp CCCCAAACCCTGGTTTCTCTCTATCCCAAGCTGCACATTCCACAGTaGAAAGCGGGAGCGGCGACCCGAAGGCAGCGAAGTTCTCTCGGG +
Preference number: 5 (lower is better)
Translates to: PQTLVSLYPKLHIPQ*KAGAATRRQRSSLG
Trigger: CCCGAGAGAACTTCGCTGCCTTCGGGTCGCCGCTCCCGCTTTCCACTGTGGAATGTGCAGCTTGGGATAGAGAGAAACCAGGGTTTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS CCA 90 bp GCCTTCGCAGCAGGGCCTGGGGCCTGGGCGCTGCTCGTTCAGAAGTaGCTCATTTTAGTGCGCTCTGACCTAGAGTTACGGAGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: AFAAGPGAWALLVQK*LILVRSDLELRRVS
Trigger: AGAAACCCTCCGTAACTCTAGGTCAGAGCGCACTAAAATGAGCCACTTCTGAACGAGCAGCGCCCAGGCCCCAGGCCCTGCTGCGAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000505220.1
ENST00000505414.5
ENST00000511598.5
ENST00000511902.5
ENST00000514014.1
CDS TCA 90 bp TGCCTCCTCAGTGAGCCAAGGATTGCTGATCTCTGCTGGGTGACCTaGCGCAGAGTCTCTTTCCAAGGCCTCCGTTACCTGAGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: CLLSEPRIADLCWVT*RRVSFQGLRYLSWG
Trigger: GCCCCAGCTCAGGTAACGGAGGCCTTGGAAAGAGACTCTGCGTCAGGTCACCCAGCAGAGATCAGCAATCCTTGGCTCACTGAGGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514014.1
CDS GCA 90 bp GGACCCGGCGGCCGAGTCACTGCTCATGGCTGCGGTGGAATCCTCTaGGGTCATAATGTCAAAGGCATCCACAGCTGGCGGAAACCAAAA +
Preference number: 5 (lower is better)
Translates to: GPGGRVTAHGCGGIL*GHNVKGIHSWRKPK
Trigger: TTTTGGTTTCCGCCAGCTGTGGATGCCTTTGACATTATGACCGCAGAGGATTCCACCGCAGCCATGAGCAGTGACTCGGCCGCCGGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505220.1
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000511902.5
ENST00000514782.5
ENST00000515053.5
CDS TCA 90 bp AACCTCCTCAGTGAGCCAAGGATTGCTGATCTCTGCTGGGTGACCTaGCGCAGAGTCTCTTTCCAAGGCCTCCGTTACCTGAGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: NLLSEPRIADLCWVT*RRVSFQGLRYLSWG
Trigger: GCCCCAGCTCAGGTAACGGAGGCCTTGGAAAGAGACTCTGCGTCAGGTCACCCAGCAGAGATCAGCAATCCTTGGCTCACTGAGGAGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505220.1
ENST00000511598.5
CDS-3UTR CAA 90 bp GTGTGGTCTGTCTTCGTGCTGGTCACCAGCCTCAGTATGTCTGGTAGACGTCGGAACATTGCGGTGGGATaGGGAATCTGGGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: VWSVFVLVTSLSMSGRRRNIAVG*GIWGGG
Trigger: CCCTCCTCCCCAGATTCCCAATCCCACCGCAATGTT...CCGACGTCTACCAGACATACTGAGGCTGGTGACCAGCACGAAGACAGACCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CAA 90 bp CCATACATGGCGGCCGCGGCTGCCGCGTTCTTCTGTAGTGTGGCGATCGTGGCTGTACAAGAGGCAAACTaGCAGGGTGAGTTTCTAGGA +
Preference number: 5 (lower is better)
Translates to: PYMAAAAAAFFCSVAIVAVQEAN*QGEFLG
Trigger: TCCTAGAAACTCACCCTGCAAGTTTGCCTCTTGTAC...AGCCACGATCGCCACACTACAGAAGAACGCGGCAGCCGCGGCCGCCATGTATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS TCA 90 bp TGGCAGGGATGGCTACTTTCACAAAGTAGTCCCTGTTGGGCCCAATaGGCGCGTTGTAGGGGTAGCCGTAGTAGGCCAGTGTGTAGGGGT +
Preference number: 5 (lower is better)
Translates to: WQGWLLSQSSPCWAQ*ARCRGSRSRPVCRG
Trigger: ACCCCTACACACTGGCCTACTACGGCTACCCCTACAACGCGCTCATTGGGCCCAACAGGGACTACTTTGTGAAAGTAGCCATCCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000381795.10
CDS-3UTR CAA 90 bp GTACCAGGTTTAATGGCAACTGGGTTGACGGTAGGGATTTCCAAATTCGGCACCACGTCGCGCGGGATCTaGCCCACGAAGACCTCGCAG +
Preference number: 5 (lower is better)
Translates to: VPGLMATGLTVGISKFGTTSRGI*PTKTSQ
Trigger: CTGCGAGGTCTTCGTGGGCAAGATCCCGCGCGACGT...GGTGCCGAATTTGGAAATCCCTACCGTCAACCCAGTTGCCATTAAACCTGGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CAA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCATGAAGAGGCGGCAGTaGTCCACGCTGCAGCACACG +
Preference number: 5 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSMKRRQ*STLQHT
Trigger: CGTGTGCTGCAGCGTGGACAACTGCCGCCTCTTCAT...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp TGGAGTTATTGGGCGGCCCTGGAAAGGTGGTGGCGTCGACACAGTGGGAATGACTGTATACTGGAGTTATaGGGCGGCCCTGGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: WSYWAALERWWRRHSGNDCILEL*GGPGKV
Trigger: CACCTTTCCAGGGCCGCCCAATAACTCCAGTATACA...GTCATTCCCACTGTGTCGACGCCACCACCTTTCCAGGGCCGCCCAATAACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS TCA 90 bp CTCTTATGCTGCCTGCTTTCACAAAGTAGTCCCTGTTGGGCCCAATaGGCGCGTTGTAGGGGTAGCCGTAGTAGGCCAGTGTGTAGGGGT +
Preference number: 5 (lower is better)
Translates to: LLCCLLSQSSPCWAQ*ARCRGSRSRPVCRG
Trigger: ACCCCTACACACTGGCCTACTACGGCTACCCCTACAACGCGCTCATTGGGCCCAACAGGGACTACTTTGTGAAAGCAGGCAGCATAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000514014.1
CDS-3UTR CAA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGGGTGGGCCGCCGTACTaGCGCTGCCCGTTCTCTTGC +
Preference number: 5 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMGGPPY*RCPFSC
Trigger: GCAAGAGAACGGGCAGCGCAAGTACGGCGGCCCACC...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCTCGCGCTTCTTCATCTaGGGGATCCCGCCGATGAAG +
Preference number: 5 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSSRFFI*GIPPMK
Trigger: CTTCATCGGCGGGATCCCCAAGATGAAGAAGCGCGA...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCACGCCCTCGGTGACCTaGGCAATCTCCTCCAGGATT +
Preference number: 5 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSTPSVT*AISSRI
Trigger: AATCCTGGAGGAGATTGCCAAGGTCACCGAGGGCGT...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCAACATTGCGGTGGGATaGGGAATCTGGGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSNIAVG*GIWGGG
Trigger: CCCTCCTCCCCAGATTCCCAATCCCACCGCAATGTT...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS TCA 90 bp AACCTCCTCAGTGAGCCAAGGATTGCTGATCTCTGCTGGGTGACCTaGCGCAGAGTCTCTTTCCAAGGCCTCCGTTACCTGAGCTTTCCT +
Preference number: 5 (lower is better)
Translates to: NLLSEPRIADLCWVT*RRVSFQGLRYLSFP
Trigger: AGGAAAGCTCAGGTAACGGAGGCCTTGGAAAGAGACTCTGCGTCAGGTCACCCAGCAGAGATCAGCAATCCTTGGCTCACTGAGGAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000510871.5
ENST00000513044.1
CDS TCA 90 bp AACCTCCTCAGTGAGCCAAGGATTGCTGATCTCTGCTGGGTGACCTaGCGCAGAGTCTCTTTCCAAGGCCTCCGTTACCTGAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: NLLSEPRIADLCWVT*RRVSFQGLRYLSKP
Trigger: TGGTTTGCTCAGGTAACGGAGGCCTTGGAAAGAGACTCTGCGTCAGGTCACCCAGCAGAGATCAGCAATCCTTGGCTCACTGAGGAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514782.5
CDS TCA 90 bp AACCTCCTCAGTGAGCCAAGGATTGCTGATCTCTGCTGGGTGACCTaGCGCAGAGTCTCTTTCCAAGGCCTCCGTTACCTGAGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: NLLSEPRIADLCWVT*RRVSFQGLRYLSFA
Trigger: AGCAAAGCTCAGGTAACGGAGGCCTTGGAAAGAGACTCTGCGTCAGGTCACCCAGCAGAGATCAGCAATCCTTGGCTCACTGAGGAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515053.5
CDS CCA 90 bp AGACTTGCAGAGAGAAAGTCTCCAGGAGGACCGCTCCCCAAACCCTaGTTTCTCTCTATCCCAAGCTGCACATTCCACAGTGGAAAGCGG +
Preference number: 5 (lower is better)
Translates to: RLAERKSPGGPLPKP*FLSIPSCTFHSGKR
Trigger: CCGCTTTCCACTGTGGAATGTGCAGCTTGGGATAGAGAGAAACCAGGGTTTGGGGAGCGGTCCTCCTGGAGACTTTCTCTCTGCAAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR CAA 90 bp TGGAGTTATTGGGCGGCCCTGGAAAGGTGGTGGCGTCGACACAGTGGGAATGACCTTAACCTTGGAGACTaGCAGAGAGAAAGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: WSYWAALERWWRRHSGNDLNLGD*QRESLQ
Trigger: CTGGAGACTTTCTCTCTGCAAGTCTCCAAGGTTAAG...GTCATTCCCACTGTGTCGACGCCACCACCTTTCCAGGGCCGCCCAATAACTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CAA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACTCACGCACTGCGCGCTaGGCCTCGTGCTTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHSRTAR*ASCLWQ
Trigger: CTGCCACAAGCACGAGGCCAAGCGCGCAGTGCGTGA...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCTCAGTGCCGTTGAGGTaGTTCATGGCATGCACGGCA +
Preference number: 5 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSSVPLR*FMACTA
Trigger: TGCCGTGCATGCCATGAACAACCTCAACGGCACTGA...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCTCCAGCTCAGTGCCGTaGAGGTTGTTCATGGCATGC +
Preference number: 5 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSSSSVP*RLFMAC
Trigger: GCATGCCATGAACAACCTCAACGGCACTGAGCTGGA...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTCCTTGTCCACGGGCTaGGCCAGCGTGACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMSLSTG*ASVTSR
Trigger: CCTGGAGGTCACGCTGGCCAAGCCCGTGGACAAGGA...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS GCA 90 bp GCTCTGGGAATTCCAGTGGGTCAGAATTGCTTAACCTTGGAGACTTaGAGAGAGAAAGTCTCCAGGAGGACCGCTCCCCAAACCCTGGTT +
Preference number: 5 (lower is better)
Translates to: ALGIPVGQNCLTLET*REKVSRRTAPQTLV
Trigger: AACCAGGGTTTGGGGAGCGGTCCTCCTGGAGACTTTCTCTCTGCAAGTCTCCAAGGTTAAGCAATTCTGACCCACTGGAATTCCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR CAA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACGCGCTGCCCGTTCTCTaGCACCATGCTGTAGCCCGT +
Preference number: 5 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHALPVL*HHAVAR
Trigger: ACGGGCTACAGCATGGTGCAAGAGAACGGGCAGCGC...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGGGTGGGCCGCCGTACTaGCGCTGCCCGTTCTCTTGC +
Preference number: 5 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLGGPPY*RCPFSC
Trigger: GCAAGAGAACGGGCAGCGCAAGTACGGCGGCCCACC...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTATCACGCACTGCGCGCTaGGCCTCGTGCTTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: FVESLIPTDLSLNAACGVSRTAR*ASCLWQ
Trigger: CTGCCACAAGCACGAGGCCAAGCGCGCAGTGCGTGA...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGACGCCCTCGGTGACCTaGGCAATCTCCTCCAGGATT +
Preference number: 5 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVTPSVT*AISSRI
Trigger: AATCCTGGAGGAGATTGCCAAGGTCACCGAGGGCGT...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTCCACGCAGCCGGGGTaGAACTGGCCGAAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMSTQPG*NWPKLF
Trigger: GAAGAGCTTCGGCCAGTTCAACCCCGGCTGCGTGGA...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTTCCTTGTCCACGGGCTaGGCCAGCGTGACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: KESFPVFGLRSAASLFNVSLSTG*ASVTSR
Trigger: CCTGGAGGTCACGCTGGCCAAGCCCGTGGACAAGGA...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGAACATTGCGGTGGGATaGGGAATCTGGGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVNIAVG*GIWGGG
Trigger: CCCTCCTCCCCAGATTCCCAATCCCACCGCAATGTT...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp AGCTGGAGCAGCAAATGGCACGTAACTGGCCCCGTAGATCCCGGCAGTAGGAATCAGGTGGCTACACCTTaGCTCTTTAATAGGCTGGTA +
Preference number: 5 (lower is better)
Translates to: SWSSKWHVTGPVDPGSRNQVATP*LFNRLV
Trigger: TACCAGCCTATTAAAGAGCAAAGGTGTAGCCACCTG...ATTCCTACTGCCGGGATCTACGGGGCCAGTTACGTGCCATTTGCTGCTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CAA 90 bp AAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGGCGCTGCCCGTTCTCTaGCACCATGCTGTAGCCCGT +
Preference number: 5 (lower is better)
Translates to: KYKSHQLLYQSYLSVLGLALPVL*HHAVAR
Trigger: ACGGGCTACAGCATGGTGCAAGAGAACGGGCAGCGC...CAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTGGTGGCTTTTATACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGACGTCGCGCGGGATCTaGCCCACGAAGACCTCGCAG +
Preference number: 5 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLTSRGI*PTKTSQ
Trigger: CTGCGAGGTCTTCGTGGGCAAGATCCCGCGCGACGT...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTATGAAGAGGCGGCAGTaGTCCACGCTGCAGCACACG +
Preference number: 5 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLAMKRRQ*STLQHT
Trigger: CGTGTGCTGCAGCGTGGACAACTGCCGCCTCTTCAT...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTTCCTTGTCCACGGGCTaGGCCAGCGTGACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRSLSTG*ASVTSR
Trigger: CCTGGAGGTCACGCTGGCCAAGCCCGTGGACAAGGA...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp AGCTGCTGGAAACATGGAATACTGAGCCCCAATGGCAGGGATGGCTACTGTACCTTATCAGTCCTAGGCTaGCCAAACATTGCGGTGGGA +
Preference number: 5 (lower is better)
Translates to: SCWKHGILSPNGRDGYCTLSVLG*PNIAVG
Trigger: TCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAA...GGTACAGTAGCCATCCCTGCCATTGGGGCTCAGTATTCCATGTTTCCAGCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS TCA 90 bp TTTCTAGGATTGTATCTTTCACAAAGTAGTCCCTGTTGGGCCCAATaGGCGCGTTGTAGGGGTAGCCGTAGTAGGCCAGTGTGTAGGGGT +
Preference number: 5 (lower is better)
Translates to: FLGLYLSQSSPCWAQ*ARCRGSRSRPVCRG
Trigger: ACCCCTACACACTGGCCTACTACGGCTACCCCTACAACGCGCTCATTGGGCCCAACAGGGACTACTTTGTGAAAGATACAATCCTAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS CCA 90 bp AGGGTTTCTGTTTATACAAGAGTTAAGGAGCCTCCCGCATTTCAGTaGAGCGCTAAGCCTGTTTGTAGGCGCGGAATGGGCCAACAGGAA +
Preference number: 5 (lower is better)
Translates to: RVSVYTRVKEPPAFQ*SAKPVCRRGMGQQE
Trigger: TTCCTGTTGGCCCATTCCGCGCCTACAAACAGGCTTAGCGCTCCACTGAAATGCGGGAGGCTCCTTAACTCTTGTATAAACAGAAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511598.5
CDS-3UTR CAA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCGGTGGGCCGCCGTACTaGCGCTGCCCGTTCTCTTGC +
Preference number: 5 (lower is better)
Translates to: VSYATRLKPCAYSATENSGGPPY*RCPFSC
Trigger: GCAAGAGAACGGGCAGCGCAAGTACGGCGGCCCACC...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACAGGTGGGCCGCCGTACTaGCGCTGCCCGTTCTCTTGC +
Preference number: 5 (lower is better)
Translates to: QVHSKGREAHLINIMFPTGGPPY*RCPFSC
Trigger: GCAAGAGAACGGGCAGCGCAAGTACGGCGGCCCACC...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTTCACGCACTGCGCGCTaGGCCTCGTGCTTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVSRTAR*ASCLWQ
Trigger: CTGCCACAAGCACGAGGCCAAGCGCGCAGTGCGTGA...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CAA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTAATGAAGAGGCGGCAGTaGTCCACGCTGCAGCACACG +
Preference number: 5 (lower is better)
Translates to: FVESLIPTDLSLNAACGVMKRRQ*STLQHT
Trigger: CGTGTGCTGCAGCGTGGACAACTGCCGCCTCTTCAT...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTTCGCGCTTCTTCATCTaGGGGATCCCGCCGATGAAG +
Preference number: 5 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLASRFFI*GIPPMK
Trigger: CTTCATCGGCGGGATCCCCAAGATGAAGAAGCGCGA...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTACGCCCTCGGTGACCTaGGCAATCTCCTCCAGGATT +
Preference number: 5 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLATPSVT*AISSRI
Trigger: AATCCTGGAGGAGATTGCCAAGGTCACCGAGGGCGT...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACACGCCCTCGGTGACCTaGGCAATCTCCTCCAGGATT +
Preference number: 5 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHTPSVT*AISSRI
Trigger: AATCCTGGAGGAGATTGCCAAGGTCACCGAGGGCGT...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGTCCACGCAGCCGGGGTaGAACTGGCCGAAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: ARTIASLLEMYERRHAKLSTQPG*NWPKLF
Trigger: GAAGAGCTTCGGCCAGTTCAACCCCGGCTGCGTGGA...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp AGCTGCTGGAAACATGGAATACTGAGCCCCAATGGCAGGGATGGCTACTGTACCGAATTCTCTGAACGTTaGGAGCCACCGTGTATACTG +
Preference number: 5 (lower is better)
Translates to: SCWKHGILSPNGRDGYCTEFSER*EPPCIL
Trigger: CAGTATACACGGTGGCTCCAAACGTTCAGAGAATTC...GGTACAGTAGCCATCCCTGCCATTGGGGCTCAGTATTCCATGTTTCCAGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CAA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCGAGTTTGAATGCAGCTaGTGGGGTACATCATCAGGA +
Preference number: 5 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSEFECS*WGTSSG
Trigger: TCCTGATGATGTACCCCACAAGCTGCATTCAAACTC...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCTTCGTGCTGGTCACCAGCCCCACAGATTTGAGTTaGAATGCAGCTTGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: SSVPSVVFVWSVFVLVTSPTDLS*NAACGV
Trigger: TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGG...GCTGGTGACCAGCACGAAGACAGACCACACAAACACCACTGAAGGAACGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS GCA 90 bp TTTAGGCTTAACTCCCAGGCTCTGGGAATTCCAGTGGGTCAGAATTaGTTAACCTTGGAGACTTGCAGAGAGAAAGTCTCCAGGAGGACC +
Preference number: 5 (lower is better)
Translates to: FRLNSQALGIPVGQN*LTLETCREKVSRRT
Trigger: GGTCCTCCTGGAGACTTTCTCTCTGCAAGTCTCCAAGGTTAAGCAATTCTGACCCACTGGAATTCCCAGAGCCTGGGAGTTAAGCCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS GCA 90 bp TATGTCTGGAAGGCTGCTTCATTATCTCACATGGGCTGTTCTGAGTaGCAGCGCCCACTATTTACAAGGTCCTTGGGGTGCTCATCTCAA +
Preference number: 5 (lower is better)
Translates to: YVWKAASLSHMGCSE*QRPLFTRSLGCSSQ
Trigger: TTGAGATGAGCACCCCAAGGACCTTGTAAATAGTGGGCGCTGGCACTCAGAACAGCCCATGTGAGATAATGAAGCAGCCTTCCAGACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS-3UTR CAA 90 bp AGCTGCTGGAAACATGGAATACTGAGCCCCAATGGCAGGGATGGCTACTGTACCTTCCTTGTTAAGTTTTaGGAGCCGCCCACTTCAGAA +
Preference number: 5 (lower is better)
Translates to: SCWKHGILSPNGRDGYCTFLVKF*EPPTSE
Trigger: TTCTGAAGTGGGCGGCTCCAAAAACTTAACAAGGAA...GGTACAGTAGCCATCCCTGCCATTGGGGCTCAGTATTCCATGTTTCCAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CAA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAGGTGGGCCGCCGTACTaGCGCTGCCCGTTCTCTTGC +
Preference number: 5 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKGGPPY*RCPFSC
Trigger: GCAAGAGAACGGGCAGCGCAAGTACGGCGGCCCACC...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCACGTCGCGCGGGATCTaGCCCACGAAGACCTCGCAG +
Preference number: 5 (lower is better)
Translates to: VSYATRLKPCAYSATENSTSRGI*PTKTSQ
Trigger: CTGCGAGGTCTTCGTGGGCAAGATCCCGCGCGACGT...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTTCCACGCAGCCGGGGTaGAACTGGCCGAAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVSTQPG*NWPKLF
Trigger: GAAGAGCTTCGGCCAGTTCAACCCCGGCTGCGTGGA...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CAA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGTCCTTGTCCACGGGCTaGGCCAGCGTGACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: FQVACVNPTCSFFINSQASLSTG*ASVTSR
Trigger: CCTGGAGGTCACGCTGGCCAAGCCCGTGGACAAGGA...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGTTCCTTCAGTGGTGTTaGTGTGGTCTGTCTTCGTGC +
Preference number: 5 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVFLQWC*CGLSSC
Trigger: GCACGAAGACAGACCACACAAACACCACTGAAGGAA...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTAAACATTGCGGTGGGATaGGGAATCTGGGGAGGAGGG +
Preference number: 5 (lower is better)
Translates to: FVESLIPTDLSLNAACGVNIAVG*GIWGGG
Trigger: CCCTCCTCCCCAGATTCCCAATCCCACCGCAATGTT...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS CCA 90 bp CTCTTTCCAAGGCCTCCGTTACCTGAGCTTTCCTTGTTAAGTTTTTaGAGCCGCCCACTTCAGAAATTAACACCATTCACAGCCCAGGAG +
Preference number: 5 (lower is better)
Translates to: LFPRPPLPELSLLSF*SRPLQKLTPFTAQE
Trigger: CTCCTGGGCTGTGAATGGTGTTAATTTCTGAAGTGGGCGGCTCCAAAAACTTAACAAGGAAAGCTCAGGTAACGGAGGCCTTGGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000510871.5
ENST00000513044.1
CDS-3UTR CAA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGGCGCTGCCCGTTCTCTaGCACCATGCTGTAGCCCGT +
Preference number: 5 (lower is better)
Translates to: FQVACVNPTCSFFINSQAALPVL*HHAVAR
Trigger: ACGGGCTACAGCATGGTGCAAGAGAACGGGCAGCGC...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAACGTCGCGCGGGATCTaGCCCACGAAGACCTCGCAG +
Preference number: 5 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKTSRGI*PTKTSQ
Trigger: CTGCGAGGTCTTCGTGGGCAAGATCCCGCGCGACGT...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGCGCTTGGCCTCGTGCTaGTGGCAGTACATGACGAAG +
Preference number: 5 (lower is better)
Translates to: ARTIASLLEMYERRHAKLRLASC*WQYMTK
Trigger: CTTCGTCATGTACTGCCACAAGCACGAGGCCAAGCG...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTTCACGCACTGCGCGCTaGGCCTCGTGCTTGTGGCAG +
Preference number: 5 (lower is better)
Translates to: LHFQVACVNPTCSFFINSSRTAR*ASCLWQ
Trigger: CTGCCACAAGCACGAGGCCAAGCGCGCAGTGCGTGA...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGATGAAGAGGCGGCAGTaGTCCACGCTGCAGCACACG +
Preference number: 5 (lower is better)
Translates to: HSKGREAHLINIMFPTPLMKRRQ*STLQHT
Trigger: CGTGTGCTGCAGCGTGGACAACTGCCGCCTCTTCAT...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCGCGCTTCTTCATCTaGGGGATCCCGCCGATGAAG +
Preference number: 5 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLSRFFI*GIPPMK
Trigger: CTTCATCGGCGGGATCCCCAAGATGAAGAAGCGCGA...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGTCGCGCTTCTTCATCTaGGGGATCCCGCCGATGAAG +
Preference number: 5 (lower is better)
Translates to: ARTIASLLEMYERRHAKLSRFFI*GIPPMK
Trigger: CTTCATCGGCGGGATCCCCAAGATGAAGAAGCGCGA...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTTCCAGCTCAGTGCCGTaGAGGTTGTTCATGGCATGC +
Preference number: 5 (lower is better)
Translates to: KESFPVFGLRSAASLFNVSSSVP*RLFMAC
Trigger: GCATGCCATGAACAACCTCAACGGCACTGAGCTGGA...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGTCCTTGTCCACGGGCTaGGCCAGCGTGACCTCCAGG +
Preference number: 5 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKSLSTG*ASVTSR
Trigger: CCTGGAGGTCACGCTGGCCAAGCCCGTGGACAAGGA...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp AGCTGGAGCAGCAAATGGCACGTAACTGGCCCCGTAGATCCCGGCAGTAGGAATTCCACTGTGTGGATTTaGCCATCTTCAATCATTTTA +
Preference number: 5 (lower is better)
Translates to: SWSSKWHVTGPVDPGSRNSTVWI*PSSIIL
Trigger: TAAAATGATTGAAGATGGCAAAATCCACACAGTGGA...ATTCCTACTGCCGGGATCTACGGGGCCAGTTACGTGCCATTTGCTGCTCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CAA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGAATTCTCTGAACGTTaGGAGCCACCGTGTATACTG +
Preference number: 5 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVEFSER*EPPCIL
Trigger: CAGTATACACGGTGGCTCCAAACGTTCAGAGAATTC...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGATTCCTTCAGTGGTGTTaGTGTGGTCTGTCTTCGTGC +
Preference number: 5 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGFLQWC*CGLSSC
Trigger: GCACGAAGACAGACCACACAAACACCACTGAAGGAA...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGATTATCAGTCCTAGGCTaGCCAAACATTGCGGTGGGA +
Preference number: 5 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGLSVLG*PNIAVG
Trigger: TCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAA...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGCCCACAGATTTGAGTTaGAATGCAGCTTGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVPTDLS*NAACGV
Trigger: TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGG...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS TCA 90 bp AACTCCTACCCGCTGATTGCAGGAGGGGAACCTTGGATAAGTGTCTaGTTCTGGGATCTTATGTCTGGAAGGCTGCTTCATTATCTCACA +
Preference number: 5 (lower is better)
Translates to: NSYPLIAGGEPWISV*FWDLMSGRLLHYLT
Trigger: TGTGAGATAATGAAGCAGCCTTCCAGACATAAGATCCCAGAATCAGACACTTATCCAAGGTTCCCCTCCTGCAATCAGCGGGTAGGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS-3UTR CAA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTGCGCTGCCCGTTCTCTaGCACCATGCTGTAGCCCGT +
Preference number: 5 (lower is better)
Translates to: LHFQVACVNPTCSFFINSALPVL*HHAVAR
Trigger: ACGGGCTACAGCATGGTGCAAGAGAACGGGCAGCGC...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCACGCTTGGCCTCGTGCTaGTGGCAGTACATGACGAAG +
Preference number: 5 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSRLASC*WQYMTK
Trigger: CTTCGTCATGTACTGCCACAAGCACGAGGCCAAGCG...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTCGCTTGGCCTCGTGCTaGTGGCAGTACATGACGAAG +
Preference number: 5 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVRLASC*WQYMTK
Trigger: CTTCGTCATGTACTGCCACAAGCACGAGGCCAAGCG...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CAA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCATCGCGCTTCTTCATCTaGGGGATCCCGCCGATGAAG +
Preference number: 5 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSSRFFI*GIPPMK
Trigger: CTTCATCGGCGGGATCCCCAAGATGAAGAAGCGCGA...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGTCCACGCAGCCGGGGTaGAACTGGCCGAAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKSTQPG*NWPKLF
Trigger: GAAGAGCTTCGGCCAGTTCAACCCCGGCTGCGTGGA...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTTCAGTGCCGTTGAGGTaGTTCATGGCATGCACGGCA +
Preference number: 5 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRSVPLR*FMACTA
Trigger: TGCCGTGCATGCCATGAACAACCTCAACGGCACTGA...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATTCAGTGCCGTTGAGGTaGTTCATGGCATGCACGGCA +
Preference number: 5 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHSVPLR*FMACTA
Trigger: TGCCGTGCATGCCATGAACAACCTCAACGGCACTGA...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTTGTATACTGGAGTTATaGGGCGGCCCTGGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: KESFPVFGLRSAASLFNVCILEL*GGPGKV
Trigger: CACCTTTCCAGGGCCGCCCAATAACTCCAGTATACA...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS GCA 90 bp GGACATAGCATGGAGTGTTTTCATTGCAAACTCCTACCCGCTGATTaGAGGAGGGGAACCTTGGATAAGTGTCTGATTCTGGGATCTTAT +
Preference number: 5 (lower is better)
Translates to: GHSMECFHCKLLPAD*RRGTLDKCLILGSY
Trigger: ATAAGATCCCAGAATCAGACACTTATCCAAGGTTCCCCTCCTGCAATCAGCGGGTAGGAGTTTGCAATGAAAACACTCCATGCTATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS-3UTR CAA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACCTTAACCTTGGAGACTaGCAGAGAGAAAGTCTCCAG +
Preference number: 5 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHLNLGD*QRESLQ
Trigger: CTGGAGACTTTCTCTCTGCAAGTCTCCAAGGTTAAG...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR CAA 90 bp CAAAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTCCAGTGGGTCAGAATaGCTTAACCTTGGAGACTTG +
Preference number: 5 (lower is better)
Translates to: QRRAFQCLDSEVRQVFSMSSGSE*LNLGDL
Trigger: CAAGTCTCCAAGGTTAAGCAATTCTGACCCACTGGA...CATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR CAA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTTTTTTGCAGTGCCCTTaGAGGCAAATCCAAACCTCC +
Preference number: 5 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLAFLQCP*RQIQTS
Trigger: GGAGGTTTGGATTTGCCTCAAAGGGCACTGCAAAAA...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR CAA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACTTTTTGCAGTGCCCTTaGAGGCAAATCCAAACCTCC +
Preference number: 5 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHFLQCP*RQIQTS
Trigger: GGAGGTTTGGATTTGCCTCAAAGGGCACTGCAAAAA...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR CAA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTATGAAGAGGCGGCAGTaGTCCACGCTGCAGCACACG +
Preference number: 5 (lower is better)
Translates to: LHFQVACVNPTCSFFINSMKRRQ*STLQHT
Trigger: CGTGTGCTGCAGCGTGGACAACTGCCGCCTCTTCAT...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCTGGCCGAAGCTCTTCTaGATGGTGTCCTCGGTGGTC +
Preference number: 5 (lower is better)
Translates to: VSYATRLKPCAYSATENSWPKLF*MVSSVV
Trigger: GACCACCGAGGACACCATCAAGAAGAGCTTCGGCCA...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGTGGCCGAAGCTCTTCTaGATGGTGTCCTCGGTGGTC +
Preference number: 5 (lower is better)
Translates to: FQVACVNPTCSFFINSQAWPKLF*MVSSVV
Trigger: GACCACCGAGGACACCATCAAGAAGAGCTTCGGCCA...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCATCAGTGCCGTTGAGGTaGTTCATGGCATGCACGGCA +
Preference number: 5 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSSVPLR*FMACTA
Trigger: TGCCGTGCATGCCATGAACAACCTCAACGGCACTGA...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGTCCAGCTCAGTGCCGTaGAGGTTGTTCATGGCATGC +
Preference number: 5 (lower is better)
Translates to: HSKGREAHLINIMFPTPLSSSVP*RLFMAC
Trigger: GCATGCCATGAACAACCTCAACGGCACTGAGCTGGA...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTTTCCTTCAGTGGTGTTaGTGTGGTCTGTCTTCGTGC +
Preference number: 5 (lower is better)
Translates to: KESFPVFGLRSAASLFNVFLQWC*CGLSSC
Trigger: GCACGAAGACAGACCACACAAACACCACTGAAGGAA...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGAGAGTCTCTGGGGGTCTaGTCTACGATAACATACATT +
Preference number: 5 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGESLGV*STITYI
Trigger: AATGTATGTTATCGTAGACAAGACCCCCAGAGACTC...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACGAGTTTGAATGCAGCTaGTGGGGTACATCATCAGGA +
Preference number: 5 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHEFECS*WGTSSG
Trigger: TCCTGATGATGTACCCCACAAGCTGCATTCAAACTC...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TCAGGGGATGAGGATCTGATCCGAATTACATTTTGTCGAGTCACTCATTCCCACATTCAGGCAGCTTCCTaGGGATTCCTCTGTTCAATT +
Preference number: 5 (lower is better)
Translates to: SGDEDLIRITFCRVTHSHIQAAS*GFLCSI
Trigger: AATTGAACAGAGGAATCCCAAGGAAGCTGCCTGAAT...GTGGGAATGAGTGACTCGACAAAATGTAATTCGGATCAGATCCTCATCCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAACGCTTGGCCTCGTGCTaGTGGCAGTACATGACGAAG +
Preference number: 5 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKRLASC*WQYMTK
Trigger: CTTCGTCATGTACTGCCACAAGCACGAGGCCAAGCG...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAACGCCCTCGGTGACCTaGGCAATCTCCTCCAGGATT +
Preference number: 5 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKTPSVT*AISSRI
Trigger: AATCCTGGAGGAGATTGCCAAGGTCACCGAGGGCGT...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATGGCCGAAGCTCTTCTaGATGGTGTCCTCGGTGGTC +
Preference number: 5 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKWPKLF*MVSSVV
Trigger: GACCACCGAGGACACCATCAAGAAGAGCTTCGGCCA...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTTGTATACTGGAGTTATaGGGCGGCCCTGGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVCILEL*GGPGKV
Trigger: CACCTTTCCAGGGCCGCCCAATAACTCCAGTATACA...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CAA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGTTCCTTCAGTGGTGTTaGTGTGGTCTGTCTTCGTGC +
Preference number: 5 (lower is better)
Translates to: ARTIASLLEMYERRHAKLFLQWC*CGLSSC
Trigger: GCACGAAGACAGACCACACAAACACCACTGAAGGAA...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp CAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGACCATTGCAAGTCTTTaGGAAATGTATGAACGTAGG +
Preference number: 5 (lower is better)
Translates to: QLLYQSYLSVLGLPNIAVTIASL*EMYERR
Trigger: CCTACGTTCATACATTTCCAAAAGACTTGCAATGGT...CACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATTTATCAGTCCTAGGCTaGCCAAACATTGCGGTGGGA +
Preference number: 5 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHLSVLG*PNIAVG
Trigger: TCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAA...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp GGCTACTGTACCAGGTTTAATGGCAACTGGGTTGACGGTAGGGATTTCCAAATTGAGTCTCTGGGGGTCTaGTCTACGATAACATACATT +
Preference number: 5 (lower is better)
Translates to: GYCTRFNGNWVDGRDFQIESLGV*STITYI
Trigger: AATGTATGTTATCGTAGACAAGACCCCCAGAGACTC...AATTTGGAAATCCCTACCGTCAACCCAGTTGCCATTAAACCTGGTACAGTAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CAA 90 bp GGAACAGATAAGTCCCAGATAGGAGGCTCACTGATACTTAATTGGCCATGTCACATGTTTCCAACACCCTaGAGGACCATGGACAGTTTT +
Preference number: 5 (lower is better)
Translates to: GTDKSQIGGSLILNWPCHMFPTP*RTMDSF
Trigger: AAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACAT...GTGACATGGCCAATTAAGTATCAGTGAGCCTCCTATCTGGGACTTATCTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CAA 90 bp GGCTACTGTACCAGGTTTAATGGCAACTGGGTTGACGGTAGGGATTTCCAAATTATGTTTCCAACACCCTaGAGGACCATGGACAGTTTT +
Preference number: 5 (lower is better)
Translates to: GYCTRFNGNWVDGRDFQIMFPTP*RTMDSF
Trigger: AAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACAT...AATTTGGAAATCCCTACCGTCAACCCAGTTGCCATTAAACCTGGTACAGTAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CAA 90 bp AGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTGGCTTTTTTGCAGTGCCCTTaGAGGCAAATCCTTATGTGG +
Preference number: 5 (lower is better)
Translates to: RAFQCLDSEVRQVFSMLAFLQCP*RQILMW
Trigger: CCACATAAGGATTTGCCTCAAAGGGCACTGCAAAAA...AGCCAACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000381795.10
CDS-3UTR CAA 90 bp GGAACAGATAAGTCCCAGATAGGAGGCTCACTGATACTTAATTGGCCATGTCACCAGAATTGCTTAACCTaGGAGACTTGCAGAGAGAAA +
Preference number: 5 (lower is better)
Translates to: GTDKSQIGGSLILNWPCHQNCLT*ETCREK
Trigger: TTTCTCTCTGCAAGTCTCCAAGGTTAAGCAATTCTG...GTGACATGGCCAATTAAGTATCAGTGAGCCTCCTATCTGGGACTTATCTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000295971.12
CDS-3UTR CAA 90 bp AAGGAGAGCTTTCCAGTGTTTGGACTCAGAAGTGCGGCAAGTCTTTTCAATGTTTTCCTTGTTAAGTTTTaGGAGCCGCCCACTTCAGAA +
Preference number: 5 (lower is better)
Translates to: KESFPVFGLRSAASLFNVFLVKF*EPPTSE
Trigger: TTCTGAAGTGGGCGGCTCCAAAAACTTAACAAGGAA...AACATTGAAAAGACTTGCCGCACTTCTGAGTCCAAACACTGGAAAGCTCTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR CAA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCCGCTTGGCCTCGTGCTaGTGGCAGTACATGACGAAG +
Preference number: 5 (lower is better)
Translates to: IASLLEMYERRHAKLKIVRLASC*WQYMTK
Trigger: CTTCGTCATGTACTGCCACAAGCACGAGGCCAAGCG...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTGGCCGAAGCTCTTCTaGATGGTGTCCTCGGTGGTC +
Preference number: 5 (lower is better)
Translates to: IASLLEMYERRHAKLKIVWPKLF*MVSSVV
Trigger: GACCACCGAGGACACCATCAAGAAGAGCTTCGGCCA...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGTCAGTGCCGTTGAGGTaGTTCATGGCATGCACGGCA +
Preference number: 5 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKSVPLR*FMACTA
Trigger: TGCCGTGCATGCCATGAACAACCTCAACGGCACTGA...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATCCAGCTCAGTGCCGTaGAGGTTGTTCATGGCATGC +
Preference number: 5 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKSSSVP*RLFMAC
Trigger: GCATGCCATGAACAACCTCAACGGCACTGAGCTGGA...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp TTTGTCGAGTCACTCATTCCCACAGATTTGAGTTTGAATGCAGCTTGTGGGGTATTAATGGCAACTGGGTaGACGGTAGGGATTTCCAAA +
Preference number: 5 (lower is better)
Translates to: FVESLIPTDLSLNAACGVLMATG*TVGISK
Trigger: TTTGGAAATCCCTACCGTCAACCCAGTTGCCATTAA...TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAGTGACTCGACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
CDS-3UTR CAA 90 bp GCACGAACCATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGGAATTCTCTGAACGTTaGGAGCCACCGTGTATACTG +
Preference number: 5 (lower is better)
Translates to: ARTIASLLEMYERRHAKLEFSER*EPPCIL
Trigger: CAGTATACACGGTGGCTCCAAACGTTCAGAGAATTC...CAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAATGGTTCGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTTTATCAGTCCTAGGCTaGCCAAACATTGCGGTGGGA +
Preference number: 5 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVLSVLG*PNIAVG
Trigger: TCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAA...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CAA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATGAGTTTGAATGCAGCTaGTGGGGTACATCATCAGGA +
Preference number: 5 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHEFECS*WGTSSG
Trigger: TCCTGATGATGTACCCCACAAGCTGCATTCAAACTC...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAGGGACTAAAGGGCAATaGACCTCACTCCTCCTGGGT +
Preference number: 5 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKGTKGQ*TSLLLG
Trigger: ACCCAGGAGGAGTGAGGTCAATTGCCCTTTAGTCCC...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000381795.10
CDS-3UTR CAA 90 bp TATCAGAGCTACTTATCAGTCCTAGGCTTGCCAAACATTGCGGTGGGATTGGGATATTTCAGCCTAGATTaGCATCCTAAGCATGTCTTC +
Preference number: 5 (lower is better)
Translates to: YQSYLSVLGLPNIAVGLGYFSLD*HPKHVF
Trigger: GAAGACATGCTTAGGATGCAAATCTAGGCTGAAATA...TCCCAATCCCACCGCAATGTTTGGCAAGCCTAGGACTGATAAGTAGCTCTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CAA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTATCCAGCTCAGTGCCGTaGAGGTTGTTCATGGCATGC +
Preference number: 5 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLSSSVP*RLFMAC
Trigger: GCATGCCATGAACAACCTCAACGGCACTGAGCTGGA...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGGAATTCTCTGAACGTTaGGAGCCACCGTGTATACTG +
Preference number: 5 (lower is better)
Translates to: HSKGREAHLINIMFPTPLEFSER*EPPCIL
Trigger: CAGTATACACGGTGGCTCCAAACGTTCAGAGAATTC...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGGCAACTGCGTTTTACTaGCTACCTTATTGCACACCT +
Preference number: 5 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLATAFY*LPYCTP
Trigger: AGGTGTGCAATAAGGTAGCAAGTAAAACGCAGTTGC...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGCCCACAGATTTGAGTTaGAATGCAGCTTGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: HSKGREAHLINIMFPTPLPTDLS*NAACGV
Trigger: TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGG...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp AAGTATAAAAGCCACCAGCTCCTCTATCAGAGCTACTTATCAGTCCTAGGCTTGCTCATTCCCACAGATTaGAGTTTGAATGCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: KYKSHQLLYQSYLSVLGLLIPTD*SLNAAC
Trigger: ACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAG...CAAGCCTAGGACTGATAAGTAGCTCTGATAGAGGAGCTGGTGGCTTTTATACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGTTAATGGCAACTGGGTaGACGGTAGGGATTTCCAAA +
Preference number: 5 (lower is better)
Translates to: HSKGREAHLINIMFPTPLLMATG*TVGISK
Trigger: TTTGGAAATCCCTACCGTCAACCCAGTTGCCATTAA...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
CDS-3UTR CAA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTATGTATACTGGAGTTATaGGGCGGCCCTGGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLCILEL*GGPGKV
Trigger: CACCTTTCCAGGGCCGCCCAATAACTCCAGTATACA...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTGTATACTGGAGTTATaGGGCGGCCCTGGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: IASLLEMYERRHAKLKIVCILEL*GGPGKV
Trigger: CACCTTTCCAGGGCCGCCCAATAACTCCAGTATACA...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCACAGATTTGAGTTaGAATGCAGCTTGTGGGGTA +
Preference number: 5 (lower is better)
Translates to: QVHSKGREAHLINIMFPTPTDLS*NAACGV
Trigger: TACCCCACAAGCTGCATTCAAACTCAAATCTGTGGG...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp GGGCATGATCCTCTTATGAATCCACAAGAATTCAGCCATCAACAAAAATCCCGTCTCATTCCCACAGATTaGAGTTTGAATGCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: GHDPLMNPQEFSHQQKSRLIPTD*SLNAAC
Trigger: ACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAG...ACGGGATTTTTGTTGATGGCTGAATTCTTGTGGATTCATAAGAGGATCATGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGCTCATTCCCACAGATTaGAGTTTGAATGCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLLIPTD*SLNAAC
Trigger: ACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAG...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS GCA 90 bp ATGTTAAAGTCTGTCTCAATCAGGCAAATGTGGCTTAGGGAATCATaGCCATTCTGTGGCATTAACTCTCAAGATGCTATTTTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: MLKSVSIRQMWLRES*PFCGINSQDAIFLH
Trigger: GTGCAGAAAAATAGCATCTTGAGAGTTAATGCCACAGAATGGGCATGATTCCCTAAGCCACATTTGCCTGATTGAGACAGACTTTAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS CCA 90 bp ATGGAGGTTTTGCAAATGTTAAAGTCTGTCTCAATCAGGCAAATGTaGCTTAGGGAATCATGCCCATTCTGTGGCATTAACTCTCAAGAT +
Preference number: 5 (lower is better)
Translates to: MEVLQMLKSVSIRQM*LRESCPFCGINSQD
Trigger: ATCTTGAGAGTTAATGCCACAGAATGGGCATGATTCCCTAAGCCACATTTGCCTGATTGAGACAGACTTTAACATTTGCAAAACCTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS-3UTR CAA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCATTCAGGCAGCTTCCTaGGGATTCCTCTGTTCAATT +
Preference number: 5 (lower is better)
Translates to: VSYATRLKPCAYSATENSIQAAS*GFLCSI
Trigger: AATTGAACAGAGGAATCCCAAGGAAGCTGCCTGAAT...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp CATTCTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAAGAATTCTCTGAACGTTaGGAGCCACCGTGTATACTG +
Preference number: 5 (lower is better)
Translates to: HSSLSGCMCESNMFLLHKEFSER*EPPCIL
Trigger: CAGTATACACGGTGGCTCCAAACGTTCAGAGAATTC...TTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACCATTGCAAGTCTTTaGGAAATGTATGAACGTAGG +
Preference number: 5 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHTIASL*EMYERR
Trigger: CCTACGTTCATACATTTCCAAAAGACTTGCAATGGT...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCGAGTCTCTGGGGGTCTaGTCTACGATAACATACATT +
Preference number: 5 (lower is better)
Translates to: VSYATRLKPCAYSATENSESLGV*STITYI
Trigger: AATGTATGTTATCGTAGACAAGACCCCCAGAGACTC...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCGCAACTGCGTTTTACTaGCTACCTTATTGCACACCT +
Preference number: 5 (lower is better)
Translates to: VSYATRLKPCAYSATENSATAFY*LPYCTP
Trigger: AGGTGTGCAATAAGGTAGCAAGTAAAACGCAGTTGC...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp CACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACACCCTTGCTCATTCCCACAGATTaGAGTTTGAATGCAGCTTGT +
Preference number: 5 (lower is better)
Translates to: HSKGREAHLINIMFPTPLLIPTD*SLNAAC
Trigger: ACAAGCTGCATTCAAACTCAAATCTGTGGGAATGAG...CAAGGGTGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCAGATCCGAATTACATTTaGTCGAGTCACTCATTCCCA +
Preference number: 5 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSDPNYI*SSHSFP
Trigger: TGGGAATGAGTGACTCGACAAAATGTAATTCGGATC...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp AATTGGCCATGTCACCAATGTTTGTTTTTAAGGGAGTTTGGTGGTTGCCATGTTGATCCGAATTACATTTaGTCGAGTCACTCATTCCCA +
Preference number: 5 (lower is better)
Translates to: NWPCHQCLFLREFGGCHVDPNYI*SSHSFP
Trigger: TGGGAATGAGTGACTCGACAAAATGTAATTCGGATC...AACATGGCAACCACCAAACTCCCTTAAAAACAAACATTGGTGACATGGCCAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
CDS-3UTR CAA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTTTTTTGCAGTGCCCTTaGAGGCAAATCCTGCTAAGC +
Preference number: 5 (lower is better)
Translates to: LHFQVACVNPTCSFFINSFLQCP*RQILLS
Trigger: GCTTAGCAGGATTTGCCTCAAAGGGCACTGCAAAAA...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000381793.6
CDS-3UTR CAA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTTTACCTGAGCTTTCCTaGTTAAGTTTTTGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: LHFQVACVNPTCSFFINSLPELS*LSFWSR
Trigger: GCGGCTCCAAAAACTTAACAAGGAAAGCTCAGGTAA...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR CAA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTATTCAGGCAGCTTCCTaGGGATTCCTCTGTTCAATT +
Preference number: 5 (lower is better)
Translates to: LHFQVACVNPTCSFFINSIQAAS*GFLCSI
Trigger: AATTGAACAGAGGAATCCCAAGGAAGCTGCCTGAAT...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp CTTCACTTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTTTAATGGCAACTGGGTaGACGGTAGGGATTTCCAAA +
Preference number: 5 (lower is better)
Translates to: LHFQVACVNPTCSFFINSLMATG*TVGISK
Trigger: TTTGGAAATCCCTACCGTCAACCCAGTTGCCATTAA...ACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAAGTGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp TGTTCCTTCTTCATAAATAGTCAAGCGTTCCTTCAGTGGTGTTTGTGTGGTCTGTCCACTGTGTGGATTTaGCCATCTTCAATCATTTTA +
Preference number: 5 (lower is better)
Translates to: CSFFINSQAFLQWCLCGLSTVWI*PSSIIL
Trigger: TAAAATGATTGAAGATGGCAAAATCCACACAGTGGA...CAGACCACACAAACACCACTGAAGGAACGCTTGACTATTTATGAAGAAGGAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp GGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATACTTCAACCATTGCAAGTCTTTaGGAAATGTATGAACGTAGG +
Preference number: 5 (lower is better)
Translates to: GGLVYDNIHSLSLQTHTSTIASL*EMYERR
Trigger: CCTACGTTCATACATTTCCAAAAGACTTGCAATGGT...TGAAGTATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGGCAACTGCGTTTTACTaGCTACCTTATTGCACACCT +
Preference number: 5 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKATAFY*LPYCTP
Trigger: AGGTGTGCAATAAGGTAGCAAGTAAAACGCAGTTGC...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTAGAGTTTGAATGCAGCTaGTGGGGTACATCATCAGGA +
Preference number: 5 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLEFECS*WGTSSG
Trigger: TCCTGATGATGTACCCCACAAGCTGCATTCAAACTC...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCGATCCGAATTACATTTaGTCGAGTCACTCATTCCCA +
Preference number: 5 (lower is better)
Translates to: VSYATRLKPCAYSATENSDPNYI*SSHSFP
Trigger: TGGGAATGAGTGACTCGACAAAATGTAATTCGGATC...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp GTCTCTGGGGGTCTTGTCTACGATAACATACATTCTTTGTCCCTACAAACTCATGGTGAGTTTCTAGGATaGTATCTTTCACAAAGTAGT +
Preference number: 5 (lower is better)
Translates to: VSGGLVYDNIHSLSLQTHGEFLG*YLSQSS
Trigger: ACTACTTTGTGAAAGATACAATCCTAGAAACTCACC...ATGAGTTTGTAGGGACAAAGAATGTATGTTATCGTAGACAAGACCCCCAGAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS-3UTR CAA 90 bp TTTAATAAACATAATGTTTCCAACACCCTTGAGGACCATGGACAGTTTTGCAAGCAGAATTGCTTAACCTaGGAGACTTGCAGAGAGAAA +
Preference number: 5 (lower is better)
Translates to: FNKHNVSNTLEDHGQFCKQNCLT*ETCREK
Trigger: TTTCTCTCTGCAAGTCTCCAAGGTTAAGCAATTCTG...CTTGCAAAACTGTCCATGGTCCTCAAGGGTGTTGGAAACATTATGTTTATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR CAA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTATTACCTGAGCTTTCCTaGTTAAGTTTTTGGAGCCGC +
Preference number: 5 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLLPELS*LSFWSR
Trigger: GCGGCTCCAAAAACTTAACAAGGAAAGCTCAGGTAA...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS-3UTR CAA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTAATTCAGGCAGCTTCCTaGGGATTCCTCTGTTCAATT +
Preference number: 5 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLIQAAS*GFLCSI
Trigger: AATTGAACAGAGGAATCCCAAGGAAGCTGCCTGAAT...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTATTAATGGCAACTGGGTaGACGGTAGGGATTTCCAAA +
Preference number: 5 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLLMATG*TVGISK
Trigger: TTTGGAAATCCCTACCGTCAACCCAGTTGCCATTAA...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp TTTCAGGTTGCATGTGTGAATCCAACATGTTCCTTCTTCATAAATAGTCAAGCGACCATTGCAAGTCTTTaGGAAATGTATGAACGTAGG +
Preference number: 5 (lower is better)
Translates to: FQVACVNPTCSFFINSQATIASL*EMYERR
Trigger: CCTACGTTCATACATTTCCAAAAGACTTGCAATGGT...CGCTTGACTATTTATGAAGAAGGAACATGTTGGATTCACACATGCAACCTGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp CAAGTGCACAGCAAAGGAAGAGAGGCCCATTTAATAAACATAATGTTTCCAACATCCACTGTGTGGATTTaGCCATCTTCAATCATTTTA +
Preference number: 5 (lower is better)
Translates to: QVHSKGREAHLINIMFPTSTVWI*PSSIIL
Trigger: TAAAATGATTGAAGATGGCAAAATCCACACAGTGGA...TGTTGGAAACATTATGTTTATTAAATGGGCCTCTCTTCCTTTGCTGTGCACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp GTGTCTTATGCAACTCGATTAAAACCTTGTGCTTACTCTGCTACTGAAAATAGCTCCACTGTGTGGATTTaGCCATCTTCAATCATTTTA +
Preference number: 5 (lower is better)
Translates to: VSYATRLKPCAYSATENSSTVWI*PSSIIL
Trigger: TAAAATGATTGAAGATGGCAAAATCCACACAGTGGA...GCTATTTTCAGTAGCAGAGTAAGCACAAGGTTTTAATCGAGTTGCATAAGACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp GCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTTAGATCCGAATTACATTTaGTCGAGTCACTCATTCCCA +
Preference number: 5 (lower is better)
Translates to: ASLLEMYERRHAKLKIVLDPNYI*SSHSFP
Trigger: TGGGAATGAGTGACTCGACAAAATGTAATTCGGATC...TAAGACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
CDS-3UTR CAA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCACCATTGCAAGTCTTTaGGAAATGTATGAACGTAGG +
Preference number: 5 (lower is better)
Translates to: IASLLEMYERRHAKLKIVTIASL*EMYERR
Trigger: CCTACGTTCATACATTTCCAAAAGACTTGCAATGGT...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS-3UTR CAA 90 bp ATTGCAAGTCTTTTGGAAATGTATGAACGTAGGCATGCTAAGTTGAAAATAGTCTCCACTGTGTGGATTTaGCCATCTTCAATCATTTTA +
Preference number: 5 (lower is better)
Translates to: IASLLEMYERRHAKLKIVSTVWI*PSSIIL
Trigger: TAAAATGATTGAAGATGGCAAAATCCACACAGTGGA...GACTATTTTCAACTTAGCATGCCTACGTTCATACATTTCCAAAAGACTTGCAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS TCA 72 bp CCGCGCGCAGGCAGGAGCGTCACGCGGACGGGGCCCTaGCCTTTGCCGGGGCCTTCGCAGCAGGGCCTGGGG +
Preference number: 6 (lower is better)
Translates to: PRAGRSVTRTGP*PLPGPSQQGLG
Trigger: CCCCAGGCCCTGCTGCGAAGGCCCCGGCAAAGGTCAGGGCCCCGTCCGCGTGACGCTCCTGCCTGCGCGCGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000505220.1
ENST00000505414.5
ENST00000511598.5
ENST00000511902.5
ENST00000514014.1
CDS CCA 72 bp CCGTGCGCTCCATCAGCGCCAGCAGTGCTGCCTCGTTaGGCGCGCCCGCCACGCCCTCGGGCACCTTGGCGG +
Preference number: 6 (lower is better)
Translates to: PCAPSAPAVLPR*ARPPRPRAPWR
Trigger: CCGCCAAGGTGCCCGAGGGCGTGGCGGGCGCGCCCAACGAGGCAGCACTGCTGGCGCTGATGGAGCGCACGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505220.1
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000511902.5
ENST00000513473.5
ENST00000514782.5
ENST00000515053.5
CDS GCA 72 bp ATCTTGCCCACGAAGACCTCGCAGCCACGCTGCGGGTaGGGGCCCTCCCAGCCGGGCGGTGGGCCGCCGTAC +
Preference number: 6 (lower is better)
Translates to: ILPTKTSQPRCG*GPSQPGGGPPY
Trigger: GTACGGCGGCCCACCGCCCGGCTGGGAGGGCCCGCACCCGCAGCGTGGCTGCGAGGTCTTCGTGGGCAAGAT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000513473.5
ENST00000514014.1
ENST00000514782.5
ENST00000515053.5
CDS GCA 72 bp CATGCTGTAGCCCGTGCGCTCCATCAGCGCCAGCAGTaGTGCCTCGTTGGGCGCGCCCGCCACGCCCTCGGG +
Preference number: 6 (lower is better)
Translates to: HAVARALHQRQQ*CLVGRARHALG
Trigger: CCCGAGGGCGTGGCGGGCGCGCCCAACGAGGCAGCACTGCTGGCGCTGATGGAGCGCACGGGCTACAGCATG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505220.1
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000511902.5
ENST00000513473.5
ENST00000514782.5
ENST00000515053.5
CDS GCA 72 bp GCGGGCCCTCCCAGCCGGGCGGTGGGCCGCCGTACTTaGGCTGCCCGTTCTCTTGCACCATGCTGTAGCCCG +
Preference number: 6 (lower is better)
Translates to: AGPPSRAVGRRT*AARSLAPCCSP
Trigger: CGGGCTACAGCATGGTGCAAGAGAACGGGCAGCGCAAGTACGGCGGCCCACCGCCCGGCTGGGAGGGCCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000513473.5
ENST00000514014.1
ENST00000514782.5
ENST00000515053.5
CDS CCA 72 bp AGGCCTCCGTTACCTGAGCTGGGGCCGAGCATGGCTTaGCCGCGCGCAGGCAGGAGCGTCACGCGGACGGGG +
Preference number: 6 (lower is better)
Translates to: RPPLPELGPSMA*PRAGRSVTRTG
Trigger: CCCCGTCCGCGTGACGCTCCTGCCTGCGCGCGGCCAAGCCATGCTCGGCCCCAGCTCAGGTAACGGAGGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505220.1
ENST00000511598.5
ENST00000514014.1
CDS CAA 72 bp TGGTGGCCCCACAGCTGGATGCGGCCAGGCATGAGCTaGCGGCGAGCCATGGCAGCCGCGCGGTGGCTCTCG +
Preference number: 6 (lower is better)
Translates to: WWPHSWMRPGMS*RRAMAAARWLS
Trigger: CGAGAGCCACCGCGCGGCTGCCATGGCTCGCCGCAAGCTCATGCCTGGCCGCATCCAGCTGTGGGGCCACCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS CCA 72 bp TGCCCTTTGAGGCAAATCCTGGGGCCGAGCATGGCTTaGCCGCGCGCAGGCAGGAGCGTCACGCGGACGGGG +
Preference number: 6 (lower is better)
Translates to: CPLRQILGPSMA*PRAGRSVTRTG
Trigger: CCCCGTCCGCGTGACGCTCCTGCCTGCGCGCGGCCAAGCCATGCTCGGCCCCAGGATTTGCCTCAAAGGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505414.5
ENST00000511902.5
CDS CAA 90 bp CTCCCAGCCGGGCGGTGGGCCGCCGTACTTGCGCTGCCCGTTCTCTaGCACCATGCTGTAGCCCGTGCGCTCCATCAGCGCCAGCAGTGC +
Preference number: 6 (lower is better)
Translates to: LPAGRWAAVLALPVL*HHAVARALHQRQQC
Trigger: GCACTGCTGGCGCTGATGGAGCGCACGGGCTACAGCATGGTGCAAGAGAACGGGCAGCGCAAGTACGGCGGCCCACCGCCCGGCTGGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000513473.5
ENST00000514014.1
ENST00000514782.5
ENST00000515053.5
CDS GCA 72 bp GCACCAGCTCGTCCTCGTACACGTCGCGCGGGATCTTaGCCACGAAGACCTCGCAGCCACGCTGCGGGTGCG +
Preference number: 6 (lower is better)
Translates to: APARPRTRRAGS*PRRPRSHAAGA
Trigger: CGCACCCGCAGCGTGGCTGCGAGGTCTTCGTGGGCAAGATCCCGCGCGACGTGTACGAGGACGAGCTGGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000513473.5
ENST00000514014.1
ENST00000514782.5
ENST00000515053.5
CDS CCA 72 bp TCGGCCCAGTCCACGGCGATCTGGTGGCCCCACAGCTaGATGCGGCCAGGCATGAGCTTGCGGCGAGCCATG +
Preference number: 6 (lower is better)
Translates to: SAQSTAIWWPHS*MRPGMSLRRAM
Trigger: CATGGCTCGCCGCAAGCTCATGCCTGGCCGCATCCAGCTGTGGGGCCACCAGATCGCCGTGGACTGGGCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS CCA 72 bp GGCCCTGACCTTTGCCGGGGCCTTCGCAGCAGGGCCTaGGGCCTGGGCGCTGCTCGTTCAGAAGTGGCTCAT +
Preference number: 6 (lower is better)
Translates to: GPDLCRGLRSRA*GLGAARSEVAH
Trigger: ATGAGCCACTTCTGAACGAGCAGCGCCCAGGCCCCAGGCCCTGCTGCGAAGGCCCCGGCAAAGGTCAGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000505220.1
ENST00000505414.5
ENST00000511598.5
ENST00000511902.5
ENST00000514014.1
CDS CCA 72 bp TTCCAAGGCCTCCGTTACCTGAGCTGGGGCCGAGCATaGCTTGGCCGCGCGCAGGCAGGAGCGTCACGCGGA +
Preference number: 6 (lower is better)
Translates to: FQGLRYLSWGRA*LGRAQAGASRG
Trigger: TCCGCGTGACGCTCCTGCCTGCGCGCGGCCAAGCCATGCTCGGCCCCAGCTCAGGTAACGGAGGCCTTGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505220.1
ENST00000511598.5
ENST00000514014.1
CDS CAA 72 bp GGGCGGTGGGCCGCCGTACTTGCGCTGCCCGTTCTCTaGCACCATGCTGTAGCCCGTGCGCTCCATCAGCGC +
Preference number: 6 (lower is better)
Translates to: GRWAAVLALPVL*HHAVARALHQR
Trigger: GCGCTGATGGAGCGCACGGGCTACAGCATGGTGCAAGAGAACGGGCAGCGCAAGTACGGCGGCCCACCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000513473.5
ENST00000514014.1
ENST00000514782.5
ENST00000515053.5
CDS CAA 90 bp TCGCGCTTCTTCATCTTGGGGATCCCGCCGATGAAGAGGCGGCAGTaGTCCACGCTGCAGCACACGCCGAGCAGGCGGCCCGGGCGGATC +
Preference number: 6 (lower is better)
Translates to: SRFFILGIPPMKRRQ*STLQHTPSRRPGRI
Trigger: GATCCGCCCGGGCCGCCTGCTCGGCGTGTGCTGCAGCGTGGACAACTGCCGCCTCTTCATCGGCGGGATCCCCAAGATGAAGAAGCGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000513473.5
ENST00000514014.1
ENST00000515053.5
CDS TCA 72 bp CGCCGAGCAGGCGGCCCGGGCGGATCTCGTAGTTGTTaGGCTCACGCACTGCGCGCTTGGCCTCGTGCTTGT +
Preference number: 6 (lower is better)
Translates to: RRAGGPGGSRSC*AHALRAWPRAC
Trigger: ACAAGCACGAGGCCAAGCGCGCAGTGCGTGAGCTCAACAACTACGAGATCCGCCCGGGCCGCCTGCTCGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505414.5
ENST00000510871.5
ENST00000513473.5
ENST00000514014.1
ENST00000515053.5
CDS TCA 72 bp GCGAGTACTGCTCCTTGTCCACGGGCTTGGCCAGCGTaGCCTCCAGGCACGAGCCCTCCAGCTCAGTGCCGT +
Preference number: 6 (lower is better)
Translates to: ASTAPCPRAWPA*PPGTSPPAQCR
Trigger: ACGGCACTGAGCTGGAGGGCTCGTGCCTGGAGGTCACGCTGGCCAAGCCCGTGGACAAGGAGCAGTACTCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS TCA 72 bp CCTGACGCAGAGTCTCTTTCCAAGGCCTCCGTTACCTaGGCTGGGGCCGAGCATGGCTTGGCCGCGCGCAGG +
Preference number: 6 (lower is better)
Translates to: PDAESLSKASVT*AGAEHGLAARR
Trigger: CCTGCGCGCGGCCAAGCCATGCTCGGCCCCAGCTCAGGTAACGGAGGCCTTGGAAAGAGACTCTGCGTCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000505220.1
ENST00000511598.5
ENST00000514014.1
CDS CCA 72 bp ACGTCGATCTCAGGTTCGGCCCAGTCCACGGCGATCTaGTGGCCCCACAGCTGGATGCGGCCAGGCATGAGC +
Preference number: 6 (lower is better)
Translates to: TSISGSAQSTAI*WPHSWMRPGMS
Trigger: GCTCATGCCTGGCCGCATCCAGCTGTGGGGCCACCAGATCGCCGTGGACTGGGCCGAACCTGAGATCGACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS CCA 72 bp CGCAGAGTCTCTTTCCAAGGCCTCCGTTACCTGAGCTaGGGCCGAGCATGGCTTGGCCGCGCGCAGGCAGGA +
Preference number: 6 (lower is better)
Translates to: RRVSFQGLRYLS*GRAWLGRAQAG
Trigger: TCCTGCCTGCGCGCGGCCAAGCCATGCTCGGCCCCAGCTCAGGTAACGGAGGCCTTGGAAAGAGACTCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000505220.1
ENST00000511598.5
ENST00000514014.1
CDS GCA 72 bp GTAGGAACCCCTAGGCCCTGGGGCTCTGTTGCCAGCTaGACCTCGCCCTCGGCCTCTTATGCTGCCTGCTTT +
Preference number: 6 (lower is better)
Translates to: VGTPRPWGSVAS*TSPSASYAACF
Trigger: AAAGCAGGCAGCATAAGAGGCCGAGGGCGAGGTGCAGCTGGCAACAGAGCCCCAGGGCCTAGGGGTTCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000514014.1
CDS CAA 72 bp TCCAGGCACGAGCCCTCCAGCTCAGTGCCGTTGAGGTaGTTCATGGCATGCACGGCATCCTCGCGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: SRHEPSSSVPLR*FMACTASSRLV
Trigger: CACCAGCCGCGAGGATGCCGTGCATGCCATGAACAACCTCAACGGCACTGAGCTGGAGGGCTCGTGCCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS CAA 72 bp GTGACCTCCAGGCACGAGCCCTCCAGCTCAGTGCCGTaGAGGTTGTTCATGGCATGCACGGCATCCTCGCGG +
Preference number: 6 (lower is better)
Translates to: VTSRHEPSSSVP*RLFMACTASSR
Trigger: CCGCGAGGATGCCGTGCATGCCATGAACAACCTCAACGGCACTGAGCTGGAGGGCTCGTGCCTGGAGGTCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS CAA 90 bp TTGGCCAGCGTGACCTCCAGGCACGAGCCCTCCAGCTCAGTGCCGTaGAGGTTGTTCATGGCATGCACGGCATCCTCGCGGCTGGTGAAG +
Preference number: 6 (lower is better)
Translates to: LASVTSRHEPSSSVP*RLFMACTASSRLVK
Trigger: CTTCACCAGCCGCGAGGATGCCGTGCATGCCATGAACAACCTCAACGGCACTGAGCTGGAGGGCTCGTGCCTGGAGGTCACGCTGGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS TCA 72 bp CGCTGGCGTAGACGATCACGTCCAGCACGCCCTCGGTaGCCTTGGCAATCTCCTCCAGGATTTCCTCGCGCT +
Preference number: 6 (lower is better)
Translates to: RWRRRSRPARPR*PWQSPPGFPRA
Trigger: AGCGCGAGGAAATCCTGGAGGAGATTGCCAAGGTCACCGAGGGCGTGCTGGACGTGATCGTCTACGCCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000513473.5
ENST00000514014.1
ENST00000515053.5
CDS GCA 72 bp GCCCGGGCGGATCTCGTAGTTGTTGAGCTCACGCACTaGGCGCTTGGCCTCGTGCTTGTGGCAGTACATGAC +
Preference number: 6 (lower is better)
Translates to: ARADLVVVELTH*ALGLVLVAVHD
Trigger: GTCATGTACTGCCACAAGCACGAGGCCAAGCGCGCAGTGCGTGAGCTCAACAACTACGAGATCCGCCCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505414.5
ENST00000510871.5
ENST00000513473.5
ENST00000514014.1
ENST00000515053.5
CDS GCA 72 bp CATCTGTCCGAGTCAGACGCTCGGCCCCCTTCGGGCTaGTCCGAGAAACCCAGCCAGAACCACGTTGGAGAA +
Preference number: 6 (lower is better)
Translates to: HLSESDARPPSG*SEKPSQNHVGE
Trigger: TTCTCCAACGTGGTTCTGGCTGGGTTTCTCGGAGCAGCCCGAAGGGGGCCGAGCGTCTGACTCGGACAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515053.5
CDS TCA 72 bp GCACTGCGCGCTTGGCCTCGTGCTTGTGGCAGTACATaGCGAAGGCGTAGCCGCGGTTCTTGCCGTCAAAGT +
Preference number: 6 (lower is better)
Translates to: ALRAWPRACGST*RRRSRGSCRQS
Trigger: ACTTTGACGGCAAGAACCGCGGCTACGCCTTCGTCATGTACTGCCACAAGCACGAGGCCAAGCGCGCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505414.5
ENST00000510871.5
ENST00000513473.5
ENST00000514014.1
ENST00000514782.5
ENST00000515053.5
CDS CCA 72 bp GCAGGGCCTGGGGCCTGGGCGCTGCTCGTTCAGAAGTaGCTCATTTTAGTGCGCTCTGACCTAGAGTTACGG +
Preference number: 6 (lower is better)
Translates to: AGPGAWALLVQK*LILVRSDLELR
Trigger: CCGTAACTCTAGGTCAGAGCGCACTAAAATGAGCCACTTCTGAACGAGCAGCGCCCAGGCCCCAGGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000505220.1
ENST00000505414.5
ENST00000511598.5
ENST00000511902.5
ENST00000514014.1
CDS CAA 72 bp TCGCGGATCTTCTTGACGCGCTCCACGCAGCCGGGGTaGAACTGGCCGAAGCTCTTCTTGATGGTGTCCTCG +
Preference number: 6 (lower is better)
Translates to: SRIFLTRSTQPG*NWPKLFLMVSS
Trigger: CGAGGACACCATCAAGAAGAGCTTCGGCCAGTTCAACCCCGGCTGCGTGGAGCGCGTCAAGAAGATCCGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS GCA 72 bp GCATTTAGAAACAGCAGCCAAGCCCTCGCTTCACCTTaGCTGCTCTCTGGGGAGTTGGCTCGAACCCCCACC +
Preference number: 6 (lower is better)
Translates to: AFRNSSQALASP*LLSGELARTPT
Trigger: GGTGGGGGTTCGAGCCAACTCCCCAGAGAGCAGGCAAGGTGAAGCGAGGGCTTGGCTGCTGTTTCTAAATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000505220.1
ENST00000511902.5
CDS CCA 72 bp ATCTTCTTGACGCGCTCCACGCAGCCGGGGTTGAACTaGCCGAAGCTCTTCTTGATGGTGTCCTCGGTGGTC +
Preference number: 6 (lower is better)
Translates to: IFLTRSTQPGLN*PKLFLMVSSVV
Trigger: GACCACCGAGGACACCATCAAGAAGAGCTTCGGCCAGTTCAACCCCGGCTGCGTGGAGCGCGTCAAGAAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS CAA 90 bp GTGACCTTGGCAATCTCCTCCAGGATTTCCTCGCGCTTCTTCATCTaGGGGATCCCGCCGATGAAGAGGCGGCAGTTGTCCACGCTGCAG +
Preference number: 6 (lower is better)
Translates to: VTLAISSRISSRFFI*GIPPMKRRQLSTLQ
Trigger: CTGCAGCGTGGACAACTGCCGCCTCTTCATCGGCGGGATCCCCAAGATGAAGAAGCGCGAGGAAATCCTGGAGGAGATTGCCAAGGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000513473.5
ENST00000514014.1
ENST00000515053.5
CDS GCA 72 bp AAGTCACATGCCTTTCAGACACCCAGAAGTGGCACCTaGTCCACCTGGGGGCATCTGTCCGAGTCAGACGCT +
Preference number: 6 (lower is better)
Translates to: KSHAFQTPRSGT*STWGHLSESDA
Trigger: AGCGTCTGACTCGGACAGATGCCCCCAGGTGGAGCAGGTGCCACTTCTGGGTGTCTGAAAGGCATGTGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000515053.5
CDS CAA 72 bp GCAATCTCCTCCAGGATTTCCTCGCGCTTCTTCATCTaGGGGATCCCGCCGATGAAGAGGCGGCAGTTGTCC +
Preference number: 6 (lower is better)
Translates to: AISSRISSRFFI*GIPPMKRRQLS
Trigger: GGACAACTGCCGCCTCTTCATCGGCGGGATCCCCAAGATGAAGAAGCGCGAGGAAATCCTGGAGGAGATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000513473.5
ENST00000514014.1
ENST00000515053.5
CDS CAA 72 bp TCCACGCAGCCGGGGTTGAACTGGCCGAAGCTCTTCTaGATGGTGTCCTCGGTGGTCTCGATCATGAGGTTG +
Preference number: 6 (lower is better)
Translates to: STQPGLNWPKLF*MVSSVVSIMRL
Trigger: CAACCTCATGATCGAGACCACCGAGGACACCATCAAGAAGAGCTTCGGCCAGTTCAACCCCGGCTGCGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000510871.5
ENST00000514014.1
CDS TCA 72 bp TGCCTGCTTTCACAAAGTAGTCCCTGTTGGGCCCAATaGGCGCGTTGTAGGGGTAGCCGTAGTAGGCCAGTG +
Preference number: 6 (lower is better)
Translates to: CLLSQSSPCWAQ*ARCRGSRSRPV
Trigger: CACTGGCCTACTACGGCTACCCCTACAACGCGCTCATTGGGCCCAACAGGGACTACTTTGTGAAAGCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000514014.1
CDS TCA 72 bp AGTGAGCCAAGGATTGCTGATCTCTGCTGGGTGACCTaGCGCAGAGTCTCTTTCCAAGGCCTCCGTTACCTG +
Preference number: 6 (lower is better)
Translates to: SEPRIADLCWVT*RRVSFQGLRYL
Trigger: CAGGTAACGGAGGCCTTGGAAAGAGACTCTGCGTCAGGTCACCCAGCAGAGATCAGCAATCCTTGGCTCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000295971.12
ENST00000505220.1
ENST00000510871.5
ENST00000511598.5
ENST00000513044.1
ENST00000514014.1
ENST00000514782.5
ENST00000515053.5
CDS TCA 72 bp TGGCTACTTTCACAAAGTAGTCCCTGTTGGGCCCAATaGGCGCGTTGTAGGGGTAGCCGTAGTAGGCCAGTG +
Preference number: 6 (lower is better)
Translates to: WLLSQSSPCWAQ*ARCRGSRSRPV
Trigger: CACTGGCCTACTACGGCTACCCCTACAACGCGCTCATTGGGCCCAACAGGGACTACTTTGTGAAAGTAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381795.10
CDS CAA 90 bp GGCTCTGGGAATTCCAGTGGGTCAGAATTGCTTAACCTTGGAGACTaGCAGAGAGAAAGTCTCCAGGAGGACCGCTCCCCAAACCCTGGT +
Preference number: 6 (lower is better)
Translates to: GSGNSSGSELLNLGD*QRESLQEDRSPNPG
Trigger: ACCAGGGTTTGGGGAGCGGTCCTCCTGGAGACTTTCTCTCTGCAAGTCTCCAAGGTTAAGCAATTCTGACCCACTGGAATTCCCAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS CAA 90 bp AACTCCCAGGCTCTGGGAATTCCAGTGGGTCAGAATTGCTTAACCTaGGAGACTTGCAGAGAGAAAGTCTCCAGGAGGACCGCTCCCCAA +
Preference number: 6 (lower is better)
Translates to: NSQALGIPVGQNCLT*ETCREKVSRRTAPQ
Trigger: TTGGGGAGCGGTCCTCCTGGAGACTTTCTCTCTGCAAGTCTCCAAGGTTAAGCAATTCTGACCCACTGGAATTCCCAGAGCCTGGGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS TCA 72 bp CCTGACGCAGAGTCTCTTTCCAAGGCCTCCGTTACCTaGGCTTTCCTTGTTAAGTTTTTGGAGCCGCCCACT +
Preference number: 6 (lower is better)
Translates to: PDAESLSKASVT*AFLVKFLEPPT
Trigger: AGTGGGCGGCTCCAAAAACTTAACAAGGAAAGCTCAGGTAACGGAGGCCTTGGAAAGAGACTCTGCGTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000510871.5
ENST00000513044.1
CDS TCA 72 bp CCTGACGCAGAGTCTCTTTCCAAGGCCTCCGTTACCTaGGCAAACCAGATTTTTACTCCCAACACCGGCAAC +
Preference number: 6 (lower is better)
Translates to: PDAESLSKASVT*ANQIFTPNTGN
Trigger: GTTGCCGGTGTTGGGAGTAAAAATCTGGTTTGCTCAGGTAACGGAGGCCTTGGAAAGAGACTCTGCGTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514782.5
CDS TCA 72 bp TTGTATCTTTCACAAAGTAGTCCCTGTTGGGCCCAATaGGCGCGTTGTAGGGGTAGCCGTAGTAGGCCAGTG +
Preference number: 6 (lower is better)
Translates to: LYLSQSSPCWAQ*ARCRGSRSRPV
Trigger: CACTGGCCTACTACGGCTACCCCTACAACGCGCTCATTGGGCCCAACAGGGACTACTTTGTGAAAGATACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS GCA 72 bp AAGGCTGCTTCATTATCTCACATGGGCTGTTCTGAGTaGCAGCGCCCACTATTTACAAGGTCCTTGGGGTGC +
Preference number: 6 (lower is better)
Translates to: KAASLSHMGCSE*QRPLFTRSLGC
Trigger: GCACCCCAAGGACCTTGTAAATAGTGGGCGCTGGCACTCAGAACAGCCCATGTGAGATAATGAAGCAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS CCA 72 bp GTTTATACAAGAGTTAAGGAGCCTCCCGCATTTCAGTaGAGCGCTAAGCCTGTTTGTAGGCGCGGAATGGGC +
Preference number: 6 (lower is better)
Translates to: VYTRVKEPPAFQ*SAKPVCRRGMG
Trigger: GCCCATTCCGCGCCTACAAACAGGCTTAGCGCTCCACTGAAATGCGGGAGGCTCCTTAACTCTTGTATAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511598.5
CDS CAA 90 bp ACAGGCAAATTCAGGCAGCTTCCTTGGGATTCCTCTGTTCAATTTTaGCAGTGCCCTTTGAGGCAAATCCTGGGGCCGAGCATGGCTTGG +
Preference number: 6 (lower is better)
Translates to: TGKFRQLPWDSSVQF*QCPLRQILGPSMAW
Trigger: CCAAGCCATGCTCGGCCCCAGGATTTGCCTCAAAGGGCACTGCAAAAATTGAACAGAGGAATCCCAAGGAAGCTGCCTGAATTTGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000505414.5
ENST00000511902.5
CDS TCA 72 bp CCTGACGCAGAGTCTCTTTCCAAGGCCTCCGTTACCTaGGCTTTGCTGAAGGTTCAAAGAAAATCGGCCTTG +
Preference number: 6 (lower is better)
Translates to: PDAESLSKASVT*ALLKVQRKSAL
Trigger: CAAGGCCGATTTTCTTTGAACCTTCAGCAAAGCTCAGGTAACGGAGGCCTTGGAAAGAGACTCTGCGTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515053.5
CDS TCA 72 bp CCCACTTTTCTCCCCCGCCACCGGGTTATGTGCATTTaGGTCATGGTGAAGATGATGCCAACTTACCAAACC +
Preference number: 6 (lower is better)
Translates to: PTFLPRHRVMCI*VMVKMMPTYQT
Trigger: GGTTTGGTAAGTTGGCATCATCTTCACCATGACTCAAATGCACATAACCCGGTGGCGGGGGAGAAAAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS GCA 72 bp ATTCCAGTGGGTCAGAATTGCTTAACCTTGGAGACTTaGAGAGAGAAAGTCTCCAGGAGGACCGCTCCCCAA +
Preference number: 6 (lower is better)
Translates to: IPVGQNCLTLET*REKVSRRTAPQ
Trigger: TTGGGGAGCGGTCCTCCTGGAGACTTTCTCTCTGCAAGTCTCCAAGGTTAAGCAATTCTGACCCACTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS CCA 72 bp CTGGAGCTGCTGGAAACATGGAATACTGAGCCCCAATaGCAGGGATGGCTACTTTCACAAAGTAGTCCCTGT +
Preference number: 6 (lower is better)
Translates to: LELLETWNTEPQ*QGWLLSQSSPC
Trigger: ACAGGGACTACTTTGTGAAAGTAGCCATCCCTGCCATTGGGGCTCAGTATTCCATGTTTCCAGCAGCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000381795.10
CDS CAA 72 bp AATTCCAGTGGGTCAGAATTGCTTAACCTTGGAGACTaGCAGAGAGAAAGTCTCCAGGAGGACCGCTCCCCA +
Preference number: 6 (lower is better)
Translates to: NSSGSELLNLGD*QRESLQEDRSP
Trigger: TGGGGAGCGGTCCTCCTGGAGACTTTCTCTCTGCAAGTCTCCAAGGTTAAGCAATTCTGACCCACTGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS CAA 90 bp ACAGGCAAATTCAGGCAGCTTCCTTGGGATTCCTCTGTTCAATTTTaGCAGTGCCCTTTGAGGCAAATCCTGCTAAGCACCTGGCGCTCT +
Preference number: 6 (lower is better)
Translates to: TGKFRQLPWDSSVQF*QCPLRQILLSTWRS
Trigger: AGAGCGCCAGGTGCTTAGCAGGATTTGCCTCAAAGGGCACTGCAAAAATTGAACAGAGGAATCCCAAGGAAGCTGCCTGAATTTGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000381793.6
ENST00000513473.5
CDS CAA 90 bp GTGATGTTCACCCACTTTTCTCCCCCGCCACCGGGTTATGTGCATTaGAGTCATGGTGAAGATGATGCCAACTTACCAAACCTCCTCAGT +
Preference number: 6 (lower is better)
Translates to: VMFTHFSPPPPGYVH*SHGEDDANLPNLLS
Trigger: ACTGAGGAGGTTTGGTAAGTTGGCATCATCTTCACCATGACTCAAATGCACATAACCCGGTGGCGGGGGAGAAAAGTGGGTGAACATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS TCA 72 bp CCGCTGATTGCAGGAGGGGAACCTTGGATAAGTGTCTaGTTCTGGGATCTTATGTCTGGAAGGCTGCTTCAT +
Preference number: 6 (lower is better)
Translates to: PLIAGGEPWISV*FWDLMSGRLLH
Trigger: ATGAAGCAGCCTTCCAGACATAAGATCCCAGAATCAGACACTTATCCAAGGTTCCCCTCCTGCAATCAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS GCA 72 bp AACTCCCAGGCTCTGGGAATTCCAGTGGGTCAGAATTaGTTAACCTTGGAGACTTGCAGAGAGAAAGTCTCC +
Preference number: 6 (lower is better)
Translates to: NSQALGIPVGQN*LTLETCREKVS
Trigger: GGAGACTTTCTCTCTGCAAGTCTCCAAGGTTAAGCAATTCTGACCCACTGGAATTCCCAGAGCCTGGGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000295971.12
ENST00000510871.5
CDS CAA 72 bp ACCCACTTTTCTCCCCCGCCACCGGGTTATGTGCATTaGAGTCATGGTGAAGATGATGCCAACTTACCAAAC +
Preference number: 6 (lower is better)
Translates to: THFSPPPPGYVH*SHGEDDANLPN
Trigger: GTTTGGTAAGTTGGCATCATCTTCACCATGACTCAAATGCACATAACCCGGTGGCGGGGGAGAAAAGTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS CAA 72 bp TGCAAACTCCTACCCGCTGATTGCAGGAGGGGAACCTaGGATAAGTGTCTGATTCTGGGATCTTATGTCTGG +
Preference number: 6 (lower is better)
Translates to: CKLLPADCRRGT*DKCLILGSYVW
Trigger: CCAGACATAAGATCCCAGAATCAGACACTTATCCAAGGTTCCCCTCCTGCAATCAGCGGGTAGGAGTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS CAA 90 bp CTGACGCAGAGTCTCTTTCCAAGGCCTCCGTTACCTGAGCTTTCCTaGTTAAGTTTTTGGAGCCGCCCACTTCAGAAATTAACACCATTC +
Preference number: 6 (lower is better)
Translates to: LTQSLFPRPPLPELS*LSFWSRPLQKLTPF
Trigger: GAATGGTGTTAATTTCTGAAGTGGGCGGCTCCAAAAACTTAACAAGGAAAGCTCAGGTAACGGAGGCCTTGGAAAGAGACTCTGCGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000510871.5
ENST00000513044.1
CDS CAA 90 bp ACAGGCAAATTCAGGCAGCTTCCTTGGGATTCCTCTGTTCAATTTTaGCAGTGCCCTTTGAGGCAAATCCAAACCTCCTCAGTGAGCCAA +
Preference number: 6 (lower is better)
Translates to: TGKFRQLPWDSSVQF*QCPLRQIQTSSVSQ
Trigger: TTGGCTCACTGAGGAGGTTTGGATTTGCCTCAAAGGGCACTGCAAAAATTGAACAGAGGAATCCCAAGGAAGCTGCCTGAATTTGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000295971.12
ENST00000505220.1
ENST00000510871.5
ENST00000511598.5
ENST00000514782.5
ENST00000515053.5
CDS CAA 90 bp CACTCTGGCAACGGAATGCCCTTCAAAAACCATGGCTCAGTGCTTTaGGTAAATGTTTTACGAGACACTAAACAGGCTTGTGTCCCACCC +
Preference number: 6 (lower is better)
Translates to: HSGNGMPFKNHGSVL*VNVLRDTKQACVPP
Trigger: GGGTGGGACACAAGCCTGTTTAGTGTCTCGTAAAACATTTACCAAAAGCACTGAGCCATGGTTTTTGAAGGGCATTCCGTTGCCAGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000381793.6
CDS CAA 90 bp TGTTTTCATTGCAAACTCCTACCCGCTGATTGCAGGAGGGGAACCTaGGATAAGTGTCTGATTCTGGGATCTTATGTCTGGAAGGCTGCT +
Preference number: 6 (lower is better)
Translates to: CFHCKLLPADCRRGT*DKCLILGSYVWKAA
Trigger: AGCAGCCTTCCAGACATAAGATCCCAGAATCAGACACTTATCCAAGGTTCCCCTCCTGCAATCAGCGGGTAGGAGTTTGCAATGAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS TCA 72 bp GCTGCTCGTTCAGAAGTGGCTCATTTTAGTGCGCTCTaGCCTAGAGTTACGGAGGGTTTCTGTTTATACAAG +
Preference number: 6 (lower is better)
Translates to: AARSEVAHFSAL*PRVTEGFCLYK
Trigger: CTTGTATAAACAGAAACCCTCCGTAACTCTAGGTCAGAGCGCACTAAAATGAGCCACTTCTGAACGAGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000505414.5
ENST00000511598.5
CDS GCA 72 bp GAGTGCCAGCGCCCACTATTTACAAGGTCCTTGGGGTaGTCATCTCAAGACTATCATATGAAGTCACCAAAA +
Preference number: 6 (lower is better)
Translates to: ECQRPLFTRSLG*SSQDYHMKSPK
Trigger: TTTTGGTGACTTCATATGATAGTCTTGAGATGAGCACCCCAAGGACCTTGTAAATAGTGGGCGCTGGCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS GCA 72 bp ATGGAGTGTTTTCATTGCAAACTCCTACCCGCTGATTaGAGGAGGGGAACCTTGGATAAGTGTCTGATTCTG +
Preference number: 6 (lower is better)
Translates to: MECFHCKLLPAD*RRGTLDKCLIL
Trigger: CAGAATCAGACACTTATCCAAGGTTCCCCTCCTGCAATCAGCGGGTAGGAGTTTGCAATGAAAACACTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS CCA 72 bp GATCTTATGTCTGGAAGGCTGCTTCATTATCTCACATaGGCTGTTCTGAGTGCCAGCGCCCACTATTTACAA +
Preference number: 6 (lower is better)
Translates to: DLMSGRLLHYLT*AVLSASAHYLQ
Trigger: TTGTAAATAGTGGGCGCTGGCACTCAGAACAGCCCATGTGAGATAATGAAGCAGCCTTCCAGACATAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS CAA 72 bp TGTTCTGAGTGCCAGCGCCCACTATTTACAAGGTCCTaGGGGTGCTCATCTCAAGACTATCATATGAAGTCA +
Preference number: 6 (lower is better)
Translates to: CSECQRPLFTRS*GCSSQDYHMKS
Trigger: TGACTTCATATGATAGTCTTGAGATGAGCACCCCAAGGACCTTGTAAATAGTGGGCGCTGGCACTCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS CAA 90 bp ACAGGCAAATTCAGGCAGCTTCCTTGGGATTCCTCTGTTCAATTTTaGCAGTGCCCTTTGAGGCAAATCCTTTCCAATCTTGATCTGGGT +
Preference number: 6 (lower is better)
Translates to: TGKFRQLPWDSSVQF*QCPLRQILSNLDLG
Trigger: ACCCAGATCAAGATTGGAAAGGATTTGCCTCAAAGGGCACTGCAAAAATTGAACAGAGGAATCCCAAGGAAGCTGCCTGAATTTGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507180.5
CDS TCA 72 bp GGCATCCACAGCTGGCGGAAACCAAAACCACTAATTTaGTTTGTCTGGTCCTTTATAAGTCGCAGAACGAGA +
Preference number: 6 (lower is better)
Translates to: GIHSWRKPKPLI*FVWSFISRRTR
Trigger: TCTCGTTCTGCGACTTATAAAGGACCAGACAAATCAAATTAGTGGTTTTGGTTTCCGCCAGCTGTGGATGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505220.1
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000511902.5
ENST00000514782.5
ENST00000515053.5
CDS TCA 72 bp GCCCCAATGGCAGGGATGGCTACAAAACCACTAATTTaGTTTGTCTGGTCCTTTATAAGTCGCAGAACGAGA +
Preference number: 6 (lower is better)
Translates to: APMAGMATKPLI*FVWSFISRRTR
Trigger: TCTCGTTCTGCGACTTATAAAGGACCAGACAAATCAAATTAGTGGTTTTGTAGCCATCCCTGCCATTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515809.1
CDS CCA 72 bp AGGCCTCCGTTACCTGAGCTTTCCTTGTTAAGTTTTTaGAGCCGCCCACTTCAGAAATTAACACCATTCACA +
Preference number: 6 (lower is better)
Translates to: RPPLPELSLLSF*SRPLQKLTPFT
Trigger: TGTGAATGGTGTTAATTTCTGAAGTGGGCGGCTCCAAAAACTTAACAAGGAAAGCTCAGGTAACGGAGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000295971.12
ENST00000510871.5
ENST00000513044.1
CDS CAA 72 bp AGGCATCCACAGCTGGCGGAAACCAAAACCACTAATTaGATTTGTCTGGTCCTTTATAAGTCGCAGAACGAG +
Preference number: 6 (lower is better)
Translates to: RHPQLAETKTTN*ICLVLYKSQNE
Trigger: CTCGTTCTGCGACTTATAAAGGACCAGACAAATCAAATTAGTGGTTTTGGTTTCCGCCAGCTGTGGATGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505220.1
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000511902.5
ENST00000514782.5
ENST00000515053.5
CDS CCA 72 bp ACCTTGGATAAGTGTCTGATTCTGGGATCTTATGTCTaGAAGGCTGCTTCATTATCTCACATGGGCTGTTCT +
Preference number: 6 (lower is better)
Translates to: TLDKCLILGSYV*KAASLSHMGCS
Trigger: AGAACAGCCCATGTGAGATAATGAAGCAGCCTTCCAGACATAAGATCCCAGAATCAGACACTTATCCAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS CAA 72 bp AGAACGAGAGTATACAGGCAAATTCAGGCAGCTTCCTaGGGATTCCTCTGTTCAATTTTTGCAGTGCCCTTT +
Preference number: 6 (lower is better)
Translates to: RTRVYRQIQAAS*GFLCSIFAVPF
Trigger: AAAGGGCACTGCAAAAATTGAACAGAGGAATCCCAAGGAAGCTGCCTGAATTTGCCTGTATACTCTCGTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000295971.12
ENST00000381793.6
ENST00000381795.10
ENST00000505220.1
ENST00000505414.5
ENST00000507180.5
ENST00000510871.5
ENST00000511598.5
ENST00000511902.5
ENST00000513473.5
ENST00000514782.5
ENST00000515053.5
CDS CAA 90 bp CTAGATTTGCATCCTAAGCATGTCTTCTTAGTACAAGAGGCAAACTaGCAGGGTGAGTTTCTAGGATTGTATCTTTCACAAAGTAGTCCC +
Preference number: 6 (lower is better)
Translates to: LDLHPKHVFLVQEAN*QGEFLGLYLSQSSP
Trigger: GGGACTACTTTGTGAAAGATACAATCCTAGAAACTCACCCTGCAAGTTTGCCTCTTGTACTAAGAAGACATGCTTAGGATGCAAATCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS CAA 90 bp AATAGGCTGGTAAAGATGCTTCCAACATTCTATTTCAGCCTAGATTaGCATCCTAAGCATGTCTTCTTAGTACAAGAGGCAAACTTGCAG +
Preference number: 6 (lower is better)
Translates to: NRLVKMLPTFYFSLD*HPKHVFLVQEANLQ
Trigger: CTGCAAGTTTGCCTCTTGTACTAAGAAGACATGCTTAGGATGCAAATCTAGGCTGAAATAGAATGTTGGAAGCATCTTTACCAGCCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS CAA 90 bp ACAGATCATGTACTATCACCTATAGGGTCTCATAACATGGAGGTTTaGCAAATGTTAAAGTCTGTCTCAATCAGGCAAATGTGGCTTAGG +
Preference number: 6 (lower is better)
Translates to: TDHVLSPIGSHNMEV*QMLKSVSIRQMWLR
Trigger: CCTAAGCCACATTTGCCTGATTGAGACAGACTTTAACATTTGCAAAACCTCCATGTTATGAGACCCTATAGGTGATAGTACATGATCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS CAA 72 bp CATCCTAAGCATGTCTTCTTAGTACAAGAGGCAAACTaGCAGGGTGAGTTTCTAGGATTGTATCTTTCACAA +
Preference number: 6 (lower is better)
Translates to: HPKHVFLVQEAN*QGEFLGLYLSQ
Trigger: TTGTGAAAGATACAATCCTAGAAACTCACCCTGCAAGTTTGCCTCTTGTACTAAGAAGACATGCTTAGGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS CAA 72 bp GTAAAGATGCTTCCAACATTCTATTTCAGCCTAGATTaGCATCCTAAGCATGTCTTCTTAGTACAAGAGGCA +
Preference number: 6 (lower is better)
Translates to: VKMLPTFYFSLD*HPKHVFLVQEA
Trigger: TGCCTCTTGTACTAAGAAGACATGCTTAGGATGCAAATCTAGGCTGAAATAGAATGTTGGAAGCATCTTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510871.5
CDS CAA 72 bp GTACTATCACCTATAGGGTCTCATAACATGGAGGTTTaGCAAATGTTAAAGTCTGTCTCAATCAGGCAAATG +
Preference number: 6 (lower is better)
Translates to: VLSPIGSHNMEV*QMLKSVSIRQM
Trigger: CATTTGCCTGATTGAGACAGACTTTAACATTTGCAAAACCTCCATGTTATGAGACCCTATAGGTGATAGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS CAA 90 bp TCATTTGGGGATTATCAGAGAAATGCTGTATTTCACCAGACCTGTTaGCATAAGGTGCACCGAATTTCAGACATGTTAAATTGTATGTGT +
Preference number: 6 (lower is better)
Translates to: SFGDYQRNAVFHQTC*HKVHRISDMLNCMC
Trigger: ACACATACAATTTAACATGTCTGAAATTCGGTGCACCTTATGCAAACAGGTCTGGTGAAATACAGCATTTCTCTGATAATCCCCAAATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513044.1
CDS CAA 72 bp GATTATCAGAGAAATGCTGTATTTCACCAGACCTGTTaGCATAAGGTGCACCGAATTTCAGACATGTTAAAT +
Preference number: 6 (lower is better)
Translates to: DYQRNAVFHQTC*HKVHRISDMLN
Trigger: ATTTAACATGTCTGAAATTCGGTGCACCTTATGCAAACAGGTCTGGTGAAATACAGCATTTCTCTGATAATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513044.1