Pregenerated sensors for RBM44 (Homo sapiens)
Ensembl gene IDs: ENSG00000177483Ensembl transcript IDs: ENST00000316997.9, ENST00000409864.6, ENST00000444524.2, ENST00000480583.5, ENST00000491996.1
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTGCTCAGAACCCAGCTaGCGTGGCCTAGTTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLCSEPS*RGLVLG Trigger: GCCCAGAACTAGGCCACGGCAGCTGGGTTCTGAGCA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTATCGGCCTCAGATACTaGAGGGCAGAGGCCACCAAC | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLIGLRY*RAEATN Trigger: GTTGGTGGCCTCTGCCCTTCAGTATCTGAGGCCGAT...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTAGAACCCAGCTGCCGTaGCCTAGTTCTGGGCAATCT | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLRTQLP*PSSGQS Trigger: AGATTGCCCAGAACTAGGCCACGGCAGCTGGGTTCT...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTATTTCCCTGTGTCCCTaGGACGTCAACTCCTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLISLCP*DVNSCQ Trigger: CTGACAGGAGTTGACGTCTCAGGGACACAGGGAAAT...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTGCTTACAATTCTTCTTaGCACCCTGGTCGGAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLAYNSS*HPGRKG Trigger: TCCCTTCCGACCAGGGTGTCAAGAAGAATTGTAAGC...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR GCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTAAAACCTCACTGTCTTaGTCAGAACCCAGCTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLKTSLS*SEPSCR Trigger: ACGGCAGCTGGGTTCTGAGCAAGACAGTGAGGTTTT...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTGTCTCTGCTGACTTCTaGATGCAGTTCAGCCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLVSADF*MQFSQS Trigger: AGACTGGCTGAACTGCATCCAGAAGTCAGCAGAGAC...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTGAGGTCCAGGAAGTTTaGCAATCTTTACAGGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLEVQEV*QSLQGW Trigger: CCAACCCTGTAAAGATTGTCAAACTTCCTGGACCTC...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTGTGTCTTGTTCTACTTaGTTTCCCTGTGTCCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLVSCST*FPCVPE Trigger: CTCAGGGACACAGGGAAATCAAGTAGAACAAGACAC...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR GCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTAGGTCTTGCACTTGTTaGCCTGCTGGTTGTGAAACA | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLRSCTC*PAGCET Trigger: TGTTTCACAACCAGCAGGGCAACAAGTGCAAGACCT...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR GCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTACTACAGAAGGTCTTaGACTTGTTGCCCTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLYYRRS*TCCPAG Trigger: ACCAGCAGGGCAACAAGTGCAAGACCTTCTGTAGTA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTTCTTCTTGACACCCTaGTCGGAAGGGAAAACCTCA | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLFFLTP*SEGKTS Trigger: TGAGGTTTTCCCTTCCGACCAGGGTGTCAAGAAGAA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTGAACCACTCTTAGATTaGGATTCCTGGTTTCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLEPLLD*DSWFPG Trigger: TCCAGGAAACCAGGAATCTCAATCTAAGAGTGGTTC...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTTGCCTGATTATCTCTaGCTGCGATCTTTGGTAGCA | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLLPDYL*LRSLVA Trigger: TGCTACCAAAGATCGCAGTCAGAGATAATCAGGCAA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTGGGCAGCTCTTCCAGTaGTATGCCTTTGTGTATTTT | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLGQLFQ*YAFVYF Trigger: AAAATACACAAAGGCATACCACTGGAAGAGCTGCCC...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTGTCTTCAAGTTCACTTaGCTGAAACTGAGTACTCTC | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLVFKFT*LKLSTL Trigger: GAGAGTACTCAGTTTCAGTCAAGTGAACTTGAAGAC...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTGTGATATTCCTGCTGTaGGTCTTCATCTGTATCATG | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLVIFLL*VFICIM Trigger: CATGATACAGATGAAGACTCACAGCAGGAATATCAC...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTTTGTGGTACTGCTATaGGCAACTTTTAGGGACGTA | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLFVVLL*ATFRDV Trigger: TACGTCCCTAAAAGTTGCTCATAGCAGTACCACAAA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTCTCTGCATTATCTTCTaGCAGCACATTGATGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLLCIIF*QHIDGK Trigger: TTTGCCATCAATGTGCTGTCAGAAGATAATGCAGAG...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR GCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTATCTTTTTGGAGGTTaGCTCCATTACTGTGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLYLFGG*LHYCGS Trigger: GCTACCACAGTAATGGAGGCAACCTCCAAAAAGATA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR GCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTGGTTTCCTGGAGAATTaGTTCTTAGTACACTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLGFLEN*FLVHCH Trigger: ATGGCAGTGTACTAAGAAGCAATTCTCCAGGAAACC...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTGCAGCTCTGCTTTTATaGCTCTCTGCATTATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLAALLL*LSALSS Trigger: AGAAGATAATGCAGAGAGCCATAAAAGCAGAGCTGC...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTCAGGAAAAGTCAATTTaGCTTCATCACAACCATTGG | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLQEKSI*LHHNHW Trigger: CCAATGGTTGTGATGAAGTCAAATTGACTTTTCCTG...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTTTGGAGACATGAAGTaGCTCTTCTTGTCCATAAAC | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLFGDMK*LFLSIN Trigger: GTTTATGGACAAGAAGAGTCACTTCATGTCTCCAAA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTTATCTTCTATTGCCTaGTTATCTCTGACTGCGATC | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLLSSIA*LSLTAI Trigger: GATCGCAGTCAGAGATAATCAGGCAATAGAAGATAA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTATCTCTGTGTTGCTTaGTGTAGATACTACAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLYLCVA*CRYYRR Trigger: CCTTCTGTAGTATCTACATCAAGCAACACAGAGATA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTACAATCTTCACTGTATaGCCAATCTGTACTACAAGC | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLTIFTV*PICTTS Trigger: GCTTGTAGTACAGATTGGTCATACAGTGAAGATTGT...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTGGAGAGAGATTTTCCTaGTCCTTTTGTTATAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLGERFS*SFCYSH Trigger: ATGGCTATAACAAAAGGATCAGGAAAATCTCTCTCC...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTGGTATTTTTGGAAATaGGACCTTAAATCGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLWYFWK*DLKSAS Trigger: TGAGGCCGATTTAAGGTCTCATTTCCAAAAATACCA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTTTGGAGGTATGAATTaGACGGGTGTATCAGGTAAT | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLFGGMN*TGVSGN Trigger: ATTACCTGATACACCCGTTCAATTCATACCTCCAAA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTATGTATTTGGAGGTATaGATTGAACGGGTGTATCAG | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLMYLEV*IERVYQ Trigger: CTGATACACCCGTTCAATTCATACCTCCAAATACAT...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR GCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTGTATTCTTGTTCTTCTaGACTGTGATATTCCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLVFLFF*TVIFLL Trigger: CAGCAGGAATATCACAGTGCAGAAGAACAAGAATAC...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTGAAGGTTTATCTTTTTaGAGGTTGCCTCCATTACTG | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLEGLSF*RLPPLL Trigger: CAGTAATGGAGGCAACCTCCAAAAAGATAAACCTTC...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTACAGTGTGGTACATTaGATTAGTCTCTTGTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLYSVVH*ISLLFL Trigger: AAGGAACAAGAGACTAATTCAATGTACCACACTGTA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTGTTTCTTTAGGTCTGTaGTACCACATGCTTTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLVSLGL*YHMLFL Trigger: TAAGAAAAGCATGTGGTATCACAGACCTAAAGAAAC...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTTCAGCATCTGCTTCTaGAAAGACATGTGTTTCTTT | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLFSICF*KDMCFF Trigger: AAAGAAACACATGTCTTTTCAGAAGCAGATGCTGAA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTACCTTTATCTCTTTGTaGGGGTTCAACATTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLTFISL*GFNILH Trigger: ATGAAGAATGTTGAACCCTCACAAAGAGATAAAGGT...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTTTGGAGGAAAGTGGTaGTGTATATTCTCCAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLFGGKW*CIFSKN Trigger: ATTCTTGGAGAATATACATCACCACTTTCCTCCAAA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTGTTTTTCAGAAGAGATaGAGTCATCTCCACAATAGT | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLVFQKR*SHLHNS Trigger: ACTATTGTGGAGATGACTTCATCTCTTCTGAAAAAC...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR TCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTATTATCTTGGAAGCCTaGAAGCATACACATTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLIILEA*KHTHSK Trigger: TTTGGAATGTGTATGCTTTCAGGCTTCCAAGATAAT...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR GCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTCGTATTATCTTCTATTaGCTGATTATCTCTGACTGC | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLRIIFY*LIISDC Trigger: GCAGTCAGAGATAATCAGGCAATAGAAGATAATACG...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR GCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTTTTCTTTGTGGTACTaGTATGAGCAACTTTTAGGG | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLFSLWY*YEQLLG Trigger: CCCTAAAAGTTGCTCATAGCAGTACCACAAAGAAAA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTAGCATGTTTTCTTTGTaGTACTGCTATGAGCAACTT | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLSMFSL*YCYEQL Trigger: AAGTTGCTCATAGCAGTACCACAAAGAAAACATGCT...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTATGGAGAATTCTGAGTaGATTTGTTTGTTGGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLMENSE*ICLLVL Trigger: AAGCACCAACAAACAAATCCACTCAGAATTCTCCAT...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTAGTGCATTTATAATATaGTCTCTGCTGACTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLSAFII*SLLTSG Trigger: TCCAGAAGTCAGCAGAGACCATATTATAAATGCACT...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR GCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTCTTCATCTGTATCATaGTTTTGTGTATCTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLSSSVS*FCVSSA Trigger: TGCTGAAGATACACAAAAGCATGATACAGATGAAGA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR GCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTCTCACTTCCTGAAGTaGATTTATAATATGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLSHFLK*IYNMVS Trigger: AGAGACCATATTATAAATGCACTTCAGGAAGTGAGA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTCAGAATTCTGAAATTTaGAGACATGAAGTGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLQNSEI*RHEVTL Trigger: AAGAGTCACTTCATGTCTCCAAATTTCAGAATTCTG...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CCA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTCCATCAAATACAGTGTaGTACATTGAATTAGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLPSNTV*YIELVS Trigger: AGAGACTAATTCAATGTACCACACTGTATTTGATGG...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS GCA 90 bp | CTGCTTCTGCCAGCAGAGGCCAGACTGCCCCTCGCTTGGGTCCGGTaGAGGCCGAGTCCTCCGCCCTCAGAGGCGGGACAGGGGCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLPAEARLPLAWVR*RPSPPPSEAGQGPG Trigger: GCCGGGCCCCTGTCCCGCCTCTGAGGGCGGAGGACTCGGCCTGCACCGGACCCAAGCGAGGGGCAGTCTGGCCTCTGCTGGCAGAAGCAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS CCA 90 bp | CCGCCTCCGAGTCAGTGGCGCCACCGGAGCAGCCGCGGCGCCTGTTaGGTAACAGTCACCAGCGGCCCGCCCACCGCCTGTCGGGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PPPSQWRHRSSRGAC*VTVTSGPPTACRAV Trigger: TACTGCCCGACAGGCGGTGGGCGGGCCGCTGGTGACTGTTACCCAACAGGCGCCGCGGCTGCTCCGGTGGCGCCACTGACTCGGAGGCGG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS TCA 90 bp | CGGCCCGCCCACCGCCTGTCGGGCAGTATGAAAAGTGCGGCACTGTaGTTGGCCCAGCCTGTGGGCGCGAAAGCGCGGGAAGGAGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RPAHRLSGSMKSAAL*LAQPVGAKAREGGR Trigger: GCGGCCTCCTTCCCGCGCTTTCGCGCCCACAGGCTGGGCCAATCACAGTGCCGCACTTTTCATACTGCCCGACAGGCGGTGGGCGGGCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS GCA 90 bp | CAGTCACCAGCGGCCCGCCCACCGCCTGTCGGGCAGTATGAAAAGTaGGGCACTGTGATTGGCCCAGCCTGTGGGCGCGAAAGCGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QSPAARPPPVGQYEK*GTVIGPACGRESAG Trigger: TCCCGCGCTTTCGCGCCCACAGGCTGGGCCAATCACAGTGCCGCACTTTTCATACTGCCCGACAGGCGGTGGGCGGGCCGCTGGTGACTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS GCA 90 bp | ATTCAAAGATATATAATCTCGGATCCGCTAGAAAGCCGCCGCCGCTaGCGCCTCCACGGGCCAGCGCCCCGCTCTCCGCAGCCGCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: IQRYIISDPLESRRR*RLHGPAPRSPQPPP Trigger: CGGAGGCGGCTGCGGAGAGCGGGGCGCTGGCCCGTGGAGGCGGCAGCGGCGGCGGCTTTCTAGCGGATCCGAGATTATATATCTTTGAAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000444524.2 ENST00000480583.5 |
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| CDS TCA 90 bp | GGCCCAGCCTGTGGGCGCGAAAGCGCGGGAAGGAGGCCGCCTGCTTaGATGTTGCACGACGTAGAAGAGATTGTGGGCGTCTGTCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GPACGRESAGRRPPA*MLHDVEEIVGVCLG Trigger: TCCAAGACAGACGCCCACAATCTCTTCTACGTCGTGCAACATTCAAGCAGGCGGCCTCCTTCCCGCGCTTTCGCGCCCACAGGCTGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480583.5 |
||
| CDS GCA 90 bp | GCGTCTGTCTTGGAGCGCAGAGCGGCCCCCAAGACTTTCCCGCTTTaGAGCCTGAAACCCTCGTCTGGACCGCGCAGCTCTGCAAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASVLERRAAPKTFPL*SLKPSSGPRSSAKS Trigger: TGACTTTGCAGAGCTGCGCGGTCCAGACGAGGGTTTCAGGCTGCAAAGCGGGAAAGTCTTGGGGGCCGCTCTGCGCTCCAAGACAGACGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000480583.5 |
||
| CDS GCA 90 bp | GATTGGCCCAGCCTGTGGGCGCGAAAGCGCGGGAAGGAGGCCGCCTaGTTGAATGTTGCACGACGTAGAAGAGATTGTGGGCGTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: DWPSLWARKRGKEAA*LNVARRRRDCGRLS Trigger: AGACAGACGCCCACAATCTCTTCTACGTCGTGCAACATTCAAGCAGGCGGCCTCCTTCCCGCGCTTTCGCGCCCACAGGCTGGGCCAATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480583.5 |
||
| CDS TCA 90 bp | TCTTGGAGCGCAGAGCGGCCCCCAAGACTTTCCCGCTTTGCAGCCTaGAACCCTCGTCTGGACCGCGCAGCTCTGCAAAGTCACCATATG | + |
|
Preference number: 5 (lower is better) Translates to: SWSAERPPRLSRFAA*NPRLDRAALQSHHM Trigger: CATATGGTGACTTTGCAGAGCTGCGCGGTCCAGACGAGGGTTTCAGGCTGCAAAGCGGGAAAGTCTTGGGGGCCGCTCTGCGCTCCAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS GCA 90 bp | CCCTGGTCGGAAGGGAAAACCTCACTGTCTTGCTCAGAACCCAGCTaGCGTGGCCTAGTTCTGGGCAATCTAGAAATGGAGAATTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PWSEGKTSLSCSEPS*RGLVLGNLEMENSE Trigger: CTCAGAATTCTCCATTTCTAGATTGCCCAGAACTAGGCCACGGCAGCTGGGTTCTGAGCAAGACAGTGAGGTTTTCCCTTCCGACCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 |
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| CDS GCA 90 bp | CAATTCTTCTTGACACCCTGGTCGGAAGGGAAAACCTCACTGTCTTaGTCAGAACCCAGCTGCCGTGGCCTAGTTCTGGGCAATCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QFFLTPWSEGKTSLS*SEPSCRGLVLGNLE Trigger: TTCTAGATTGCCCAGAACTAGGCCACGGCAGCTGGGTTCTGAGCAAGACAGTGAGGTTTTCCCTTCCGACCAGGGTGTCAAGAAGAATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 |
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| CDS GCA 90 bp | CCCTTTTTGGAGGTTGCCTCCATTACTGTGGTAGCCTTTACCAGATaGTGTCTCCACCACTGCAGTGGCCTGCATCATTCAAAGATATAT | + |
|
Preference number: 5 (lower is better) Translates to: PFLEVASITVVAFTR*CLHHCSGLHHSKIY Trigger: ATATATCTTTGAATGATGCAGGCCACTGCAGTGGTGGAGACAGCATCTGGTAAAGGCTACCACAGTAATGGAGGCAACCTCCAAAAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000444524.2 |
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| CDS GCA 90 bp | ATCTTTTTGGAGGTTGCCTCCATTACTGTGGTAGCCTTTACCAGATaGTGTCTCCACCACTGCAGTGGCCTGCATCATTCAAAGATATAT | + |
|
Preference number: 5 (lower is better) Translates to: IFLEVASITVVAFTR*CLHHCSGLHHSKIY Trigger: ATATATCTTTGAATGATGCAGGCCACTGCAGTGGTGGAGACAGCATCTGGTAAAGGCTACCACAGTAATGGAGGCAACCTCCAAAAAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 |
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| CDS-3UTR CAA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTGAAAACCTCACTGTCTaGCTCAGAACCCAGCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLENLTV*LRTQLP Trigger: CGGCAGCTGGGTTCTGAGCAAGACAGTGAGGTTTTC...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CAA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTATACTACAGAAGGTCTaGCACTTGTTGCCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLILQKV*HLLPCW Trigger: CCAGCAGGGCAACAAGTGCAAGACCTTCTGTAGTAT...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
||
| CDS-3UTR CAA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTCAGACCAGTCTTCGCTaGTCTCTTGGTAATGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLQTSLR*SLGNVC Trigger: GCAGACATTACCAAGAGACAAGCGAAGACTGGTCTG...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CAA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTGCTTACAATTCTTCTaGACACCCTGGTCGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLCLQFF*TPWSEG Trigger: CCCTTCCGACCAGGGTGTCAAGAAGAATTGTAAGCA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CAA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTGGAACCACTCTTAGATaGAGATTCCTGGTTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLGTTLR*RFLVSW Trigger: CCAGGAAACCAGGAATCTCAATCTAAGAGTGGTTCC...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS TCA 90 bp | AGGGCAGAGGCCACCAACATGTATCAAATAACCTTTATCTCTTTGTaGGGGTTCAACATTCTTCATTTCTCCTGTAAGATCCAAATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RAEATNMYQITFISL*GFNILHFSCKIQIP Trigger: TGGAATTTGGATCTTACAGGAGAAATGAAGAATGTTGAACCCTCACAAAGAGATAAAGGTTATTTGATACATGTTGGTGGCCTCTGCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 |
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| CDS-3UTR CAA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTCTTCTGACAGCACATaGATGGCAAATCCTTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLSSDST*MANPSL Trigger: CAGAGAAGGATTTGCCATCAATGTGCTGTCAGAAGA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CAA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTGTCTTCGCTTGTCTCTaGGTAATGTCTGCAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLVFACL*VMSAVF Trigger: AAAGACTGCAGACATTACCAAGAGACAAGCGAAGAC...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS TCA 90 bp | CAGGCAGAAATTATCGAATCATCAAAAACAGAGGTCCAGGAAGTTTaGCAATCTTTACAGGGTTGGAGTAATGTCTCTAAAGCTTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: QAEIIESSKTEVQEV*QSLQGWSNVSKALS Trigger: GGATAAAGCTTTAGAGACATTACTCCAACCCTGTAAAGATTGTCAAACTTCCTGGACCTCTGTTTTTGATGATTCGATAATTTCTGCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 |
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| CDS CCA 90 bp | TGCCGTGGCCTAGTTCTGGGCAATCTAGAAATGGAGAATTCTGAGTaGATTTGTTTGTTGGTGCTTTTCTCTAAATTATTCGAACTAATT | + |
|
Preference number: 5 (lower is better) Translates to: CRGLVLGNLEMENSE*ICLLVLFSKLFELI Trigger: AATTAGTTCGAATAATTTAGAGAAAAGCACCAACAAACAAATCCACTCAGAATTCTCCATTTCTAGATTGCCCAGAACTAGGCCACGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 |
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| CDS TCA 90 bp | GTTACTTATGTATTCTTGTTCTTCTGCACTGTGATATTCCTGCTGTaGGTCTTCATCTGTATCATGCTTTTGTGTATCTTCAGCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VTYVFLFFCTVIFLL*VFICIMLLCIFSTF Trigger: GAAAGTGCTGAAGATACACAAAAGCATGATACAGATGAAGACTCACAGCAGGAATATCACAGTGCAGAAGAACAAGAATACATAAGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 |
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| CDS-3UTR CAA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTGTCTTCAAGTTCACTaGACTGAAACTGAGTACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLCLQVH*TETEYS Trigger: AGAGTACTCAGTTTCAGTCAAGTGAACTTGAAGACA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CAA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTAGTCTCTTTATGATCTaGGTAAAGCTACGAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLSLFMI*VKLRRF Trigger: GAACCTTCGTAGCTTTACCAAGATCATAAAGAGACT...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CAA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTATCTGTATCATGCTTTaGTGTATCTTCAGCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLICIML*CIFSTF Trigger: GAAAGTGCTGAAGATACACAAAAGCATGATACAGAT...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CAA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTACAAGCCACACTTTTTaGTTTCTCATTTTGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLTSHTF*FLILPF Trigger: GAATGGCAAAATGAGAAACAAAAAAGTGTGGCTTGT...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CAA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTATTCTATTCCCATTTTaGGAGGAAAGTGGTGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLILFPF*EESGDV Trigger: TACATCACCACTTTCCTCCAAAAATGGGAATAGAAT...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS-3UTR CAA 90 bp | TTACTACTTTTTCCTAAGTGCTGTAGAACATTCTCTGAAGGAGGAAACACACTTTCTGAGTGGATTTGTTaGTTGGTGCTTTTCTCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLLFPKCCRTFSEGGNTLSEWIC*LVLFSK Trigger: TTTAGAGAAAAGCACCAACAAACAAATCCACTCAGA...AAGTGTGTTTCCTCCTTCAGAGAATGTTCTACAGCACTTAGGAAAAAGTAGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000316997.9 |
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| CDS TCA 90 bp | ATCTTGGTAAAGCTACGAAGGTTCAATGTATTTGGAGGTATGAATTaGACGGGTGTATCAGGTAATAATTTAGCAGATTCAATCTGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: ILVKLRRFNVFGGMN*TGVSGNNLADSICL Trigger: TAAGCAGATTGAATCTGCTAAATTATTACCTGATACACCCGTTCAATTCATACCTCCAAATACATTGAACCTTCGTAGCTTTACCAAGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 ENST00000491996.1 |
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| CDS CCA 90 bp | TTTCCTGGAGAATTGCTTCTTAGTACACTGCCATCAAATACAGTGTaGTACATTGAATTAGTCTCTTGTTCCTTATACTTTTCATGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FPGELLLSTLPSNTV*YIELVSCSLYFSCF Trigger: AAAGCATGAAAAGTATAAGGAACAAGAGACTAATTCAATGTACCACACTGTATTTGATGGCAGTGTACTAAGAAGCAATTCTCCAGGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 |
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| CDS CCA 72 bp | CCAGCGCCCCGCTCTCCGCAGCCGCCTCCGAGTCAGTaGCGCCACCGGAGCAGCCGCGGCGCCTGTTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: PAPRSPQPPPSQ*RHRSSRGACWV Trigger: TACCCAACAGGCGCCGCGGCTGCTCCGGTGGCGCCACTGACTCGGAGGCGGCTGCGGAGAGCGGGGCGCTGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS CAA 90 bp | GCCGCCTCCGAGTCAGTGGCGCCACCGGAGCAGCCGCGGCGCCTGTaGGGTAACAGTCACCAGCGGCCCGCCCACCGCCTGTCGGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: AASESVAPPEQPRRL*GNSHQRPAHRLSGS Trigger: ACTGCCCGACAGGCGGTGGGCGGGCCGCTGGTGACTGTTACCCAACAGGCGCCGCGGCTGCTCCGGTGGCGCCACTGACTCGGAGGCGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS CAA 72 bp | GAGTCAGTGGCGCCACCGGAGCAGCCGCGGCGCCTGTaGGGTAACAGTCACCAGCGGCCCGCCCACCGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ESVAPPEQPRRL*GNSHQRPAHRL Trigger: CAGGCGGTGGGCGGGCCGCTGGTGACTGTTACCCAACAGGCGCCGCGGCTGCTCCGGTGGCGCCACTGACTC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS GCA 72 bp | CCAGCAGAGGCCAGACTGCCCCTCGCTTGGGTCCGGTaGAGGCCGAGTCCTCCGCCCTCAGAGGCGGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: PAEARLPLAWVR*RPSPPPSEAGQ Trigger: CTGTCCCGCCTCTGAGGGCGGAGGACTCGGCCTGCACCGGACCCAAGCGAGGGGCAGTCTGGCCTCTGCTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS CCA 72 bp | AGTCAGTGGCGCCACCGGAGCAGCCGCGGCGCCTGTTaGGTAACAGTCACCAGCGGCCCGCCCACCGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SQWRHRSSRGAC*VTVTSGPPTAC Trigger: ACAGGCGGTGGGCGGGCCGCTGGTGACTGTTACCCAACAGGCGCCGCGGCTGCTCCGGTGGCGCCACTGACT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS CAA 72 bp | GCTGCTTCTGCCAGCAGAGGCCAGACTGCCCCTCGCTaGGGTCCGGTGCAGGCCGAGTCCTCCGCCCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AASASRGQTAPR*GPVQAESSALR Trigger: TCTGAGGGCGGAGGACTCGGCCTGCACCGGACCCAAGCGAGGGGCAGTCTGGCCTCTGCTGGCAGAAGCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS GCA 72 bp | TATATAATCTCGGATCCGCTAGAAAGCCGCCGCCGCTaGCGCCTCCACGGGCCAGCGCCCCGCTCTCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: YIISDPLESRRR*RLHGPAPRSPQ Trigger: CTGCGGAGAGCGGGGCGCTGGCCCGTGGAGGCGGCAGCGGCGGCGGCTTTCTAGCGGATCCGAGATTATATA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000444524.2 ENST00000480583.5 |
||
| CDS GCA 72 bp | GCGGCCCGCCCACCGCCTGTCGGGCAGTATGAAAAGTaGGGCACTGTGATTGGCCCAGCCTGTGGGCGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: AARPPPVGQYEK*GTVIGPACGRE Trigger: TTCGCGCCCACAGGCTGGGCCAATCACAGTGCCGCACTTTTCATACTGCCCGACAGGCGGTGGGCGGGCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480583.5 |
||
| CDS CAA 72 bp | CTTGGAGCGCAGAGCGGCCCCCAAGACTTTCCCGCTTaGCAGCCTGAAACCCTCGTCTGGACCGCGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LGAQSGPQDFPA*QPETLVWTAQL Trigger: GAGCTGCGCGGTCCAGACGAGGGTTTCAGGCTGCAAAGCGGGAAAGTCTTGGGGGCCGCTCTGCGCTCCAAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000480583.5 |
||
| CDS TCA 72 bp | AGGGCGTCCTACGCGTCGGTCAGGGGCACACACGCCTaGGTACGGAACGAACTTCACGTCCCCCTCTCGCTA | + |
|
Preference number: 6 (lower is better) Translates to: RASYASVRGTHA*VRNELHVPLSL Trigger: TAGCGAGAGGGGGACGTGAAGTTCGTTCCGTACTCAGGCGTGTGTGCCCCTGACCGACGCGTAGGACGCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409864.6 |
||
| CDS GCA 72 bp | TTGGAGCGCAGAGCGGCCCCCAAGACTTTCCCGCTTTaGAGCCTGAAACCCTCGTCTGGACCGCGCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LERRAAPKTFPL*SLKPSSGPRSS Trigger: AGAGCTGCGCGGTCCAGACGAGGGTTTCAGGCTGCAAAGCGGGAAAGTCTTGGGGGCCGCTCTGCGCTCCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS CAA 90 bp | GGCGTCTGTCTTGGAGCGCAGAGCGGCCCCCAAGACTTTCCCGCTTaGCAGCCTGAAACCCTCGTCTGGACCGCGCAGCTCTGCAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: GVCLGAQSGPQDFPA*QPETLVWTAQLCKV Trigger: GACTTTGCAGAGCTGCGCGGTCCAGACGAGGGTTTCAGGCTGCAAAGCGGGAAAGTCTTGGGGGCCGCTCTGCGCTCCAAGACAGACGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS CAA 90 bp | TGGCCCAGCCTGTGGGCGCGAAAGCGCGGGAAGGAGGCCGCCTGCTaGAATGTTGCACGACGTAGAAGAGATTGTGGGCGTCTGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: WPSLWARKRGKEAAC*NVARRRRDCGRLSW Trigger: CCAAGACAGACGCCCACAATCTCTTCTACGTCGTGCAACATTCAAGCAGGCGGCCTCCTTCCCGCGCTTTCGCGCCCACAGGCTGGGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS TCA 72 bp | GCAGAGCGGCCCCCAAGACTTTCCCGCTTTGCAGCCTaGAACCCTCGTCTGGACCGCGCAGCTCTGCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: AERPPRLSRFAA*NPRLDRAALQS Trigger: ACTTTGCAGAGCTGCGCGGTCCAGACGAGGGTTTCAGGCTGCAAAGCGGGAAAGTCTTGGGGGCCGCTCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS TCA 72 bp | TGTGGGCGCGAAAGCGCGGGAAGGAGGCCGCCTGCTTaGATGTTGCACGACGTAGAAGAGATTGTGGGCGTC | + |
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Preference number: 6 (lower is better) Translates to: CGRESAGRRPPA*MLHDVEEIVGV Trigger: GACGCCCACAATCTCTTCTACGTCGTGCAACATTCAAGCAGGCGGCCTCCTTCCCGCGCTTTCGCGCCCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS GCA 72 bp | AGCCTGTGGGCGCGAAAGCGCGGGAAGGAGGCCGCCTaGTTGAATGTTGCACGACGTAGAAGAGATTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: SLWARKRGKEAA*LNVARRRRDCG Trigger: CCCACAATCTCTTCTACGTCGTGCAACATTCAAGCAGGCGGCCTCCTTCCCGCGCTTTCGCGCCCACAGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS CAA 72 bp | CTGTGGGCGCGAAAGCGCGGGAAGGAGGCCGCCTGCTaGAATGTTGCACGACGTAGAAGAGATTGTGGGCGT | + |
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Preference number: 6 (lower is better) Translates to: LWARKRGKEAAC*NVARRRRDCGR Trigger: ACGCCCACAATCTCTTCTACGTCGTGCAACATTCAAGCAGGCGGCCTCCTTCCCGCGCTTTCGCGCCCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS CCA 72 bp | GTTGCACGACGTAGAAGAGATTGTGGGCGTCTGTCTTaGAGCGCAGAGCGGCCCCCAAGACTTTCCCGCTTT | + |
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Preference number: 6 (lower is better) Translates to: VARRRRDCGRLS*SAERPPRLSRF Trigger: AAAGCGGGAAAGTCTTGGGGGCCGCTCTGCGCTCCAAGACAGACGCCCACAATCTCTTCTACGTCGTGCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS CAA 72 bp | CTTGACACCCTGGTCGGAAGGGAAAACCTCACTGTCTaGCTCAGAACCCAGCTGCCGTGGCCTAGTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LDTLVGRENLTV*LRTQLPWPSSG Trigger: CCCAGAACTAGGCCACGGCAGCTGGGTTCTGAGCAAGACAGTGAGGTTTTCCCTTCCGACCAGGGTGTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 |
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| CDS GCA 72 bp | GAGGTTGCCTCCATTACTGTGGTAGCCTTTACCAGATaGTGTCTCCACCACTGCAGTGGCCTGCATCATTCA | + |
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Preference number: 6 (lower is better) Translates to: EVASITVVAFTR*CLHHCSGLHHS Trigger: TGAATGATGCAGGCCACTGCAGTGGTGGAGACAGCATCTGGTAAAGGCTACCACAGTAATGGAGGCAACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000444524.2 ENST00000480583.5 |
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| CDS GCA 72 bp | GAAGGGAAAACCTCACTGTCTTGCTCAGAACCCAGCTaGCGTGGCCTAGTTCTGGGCAATCTAGAAATGGAG | + |
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Preference number: 6 (lower is better) Translates to: EGKTSLSCSEPS*RGLVLGNLEME Trigger: CTCCATTTCTAGATTGCCCAGAACTAGGCCACGGCAGCTGGGTTCTGAGCAAGACAGTGAGGTTTTCCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 |
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| CDS CAA 90 bp | ACAATTCTTCTTGACACCCTGGTCGGAAGGGAAAACCTCACTGTCTaGCTCAGAACCCAGCTGCCGTGGCCTAGTTCTGGGCAATCTAGA | + |
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Preference number: 6 (lower is better) Translates to: TILLDTLVGRENLTV*LRTQLPWPSSGQSR Trigger: TCTAGATTGCCCAGAACTAGGCCACGGCAGCTGGGTTCTGAGCAAGACAGTGAGGTTTTCCCTTCCGACCAGGGTGTCAAGAAGAATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 |
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| CDS TCA 72 bp | CCATGTGTCTTGTTCTACTTGATTTCCCTGTGTCCCTaGGACGTCAACTCCTGTCAGGCTCTCTTTAGCATC | + |
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Preference number: 6 (lower is better) Translates to: PCVLFYLISLCP*DVNSCQALFSI Trigger: GATGCTAAAGAGAGCCTGACAGGAGTTGACGTCTCAGGGACACAGGGAAATCAAGTAGAACAAGACACATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 |
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| CDS GCA 72 bp | CCTCTGAATGACTACAGTCCAGGCCAACATCTTGACTaGAACATGAAAAACCCTGAGCTAAAACTACCCGGC | + |
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Preference number: 6 (lower is better) Translates to: PLNDYSPGQHLD*NMKNPELKLPG Trigger: GCCGGGTAGTTTTAGCTCAGGGTTTTTCATGTTGCAGTCAAGATGTTGGCCTGGACTGTAGTCATTCAGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000491996.1 |
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| CDS CCA 72 bp | TGTTTTCACTGGATTCATCATGCCAACCACGCACTGTaGCCCCTCCATGAAACTCAAGGGTTCTATTACCCT | + |
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Preference number: 6 (lower is better) Translates to: CFHWIHHANHAL*PLHETQGFYYP Trigger: AGGGTAATAGAACCCTTGAGTTTCATGGAGGGGCCACAGTGCGTGGTTGGCATGATGAATCCAGTGAAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480583.5 |
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| CDS TCA 72 bp | AGACATTTGAAGAGCCTTATGGAAGAGCCTATGTGGTaGGGAACTGAGGCCTCTTGCCAACAGACATGTGAA | + |
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Preference number: 6 (lower is better) Translates to: RHLKSLMEEPMW*GTEASCQQTCE Trigger: TTCACATGTCTGTTGGCAAGAGGCCTCAGTTCCTCACCACATAGGCTCTTCCATAAGGCTCTTCAAATGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491996.1 |
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| CDS TCA 72 bp | TGCAGCTCTGCTTTTATGGCTCTCTGCATTATCTTCTaGCAGCACATTGATGGCAAATCCTTCTCTGTATCT | + |
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Preference number: 6 (lower is better) Translates to: CSSAFMALCIIF*QHIDGKSFSVS Trigger: AGATACAGAGAAGGATTTGCCATCAATGTGCTGTCAGAAGATAATGCAGAGAGCCATAAAAGCAGAGCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000444524.2 ENST00000480583.5 |
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| CDS CAA 72 bp | ACTTCTGGATGCAGTTCAGCCAGTCTCTTTATGATCTaGGTAAAGCTACGAAGGTTCAATGTATTTGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: TSGCSSASLFMI*VKLRRFNVFGG Trigger: ACCTCCAAATACATTGAACCTTCGTAGCTTTACCAAGATCATAAAGAGACTGGCTGAACTGCATCCAGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 ENST00000491996.1 |
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| CDS TCA 72 bp | GTATTCTTGTTCTTCTGCACTGTGATATTCCTGCTGTaGGTCTTCATCTGTATCATGCTTTTGTGTATCTTC | + |
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Preference number: 6 (lower is better) Translates to: VFLFFCTVIFLL*VFICIMLLCIF Trigger: GAAGATACACAAAAGCATGATACAGATGAAGACTCACAGCAGGAATATCACAGTGCAGAAGAACAAGAATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 |
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| CDS TCA 72 bp | GTTGAAATTCCCTCTCAGGATGTTTCTTTAGGTCTGTaGTACCACATGCTTTTCTTAATTCCAGGAAATCCT | + |
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Preference number: 6 (lower is better) Translates to: VEIPSQDVSLGL*YHMLFLIPGNP Trigger: AGGATTTCCTGGAATTAAGAAAAGCATGTGGTATCACAGACCTAAAGAAACATCCTGAGAGGGAATTTCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 |
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| CDS CAA 90 bp | TGCTCTAGTGTCGAAGAATTCCAGTCATCATCAGGAAAAGTCAATTaGACTTCATCACAACCATTGGAGGATAATAACAAATTTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: CSSVEEFQSSSGKVN*TSSQPLEDNNKFSF Trigger: GAAAGAAAATTTGTTATTATCCTCCAATGGTTGTGATGAAGTCAAATTGACTTTTCCTGATGATGACTGGAATTCTTCGACACTAGAGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 |
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| CDS TCA 72 bp | ATTATCGAATCATCAAAAACAGAGGTCCAGGAAGTTTaGCAATCTTTACAGGGTTGGAGTAATGTCTCTAAA | + |
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Preference number: 6 (lower is better) Translates to: IIESSKTEVQEV*QSLQGWSNVSK Trigger: TTTAGAGACATTACTCCAACCCTGTAAAGATTGTCAAACTTCCTGGACCTCTGTTTTTGATGATTCGATAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 |
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| CDS TCA 72 bp | AAGCTACGAAGGTTCAATGTATTTGGAGGTATGAATTaGACGGGTGTATCAGGTAATAATTTAGCAGATTCA | + |
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Preference number: 6 (lower is better) Translates to: KLRRFNVFGGMN*TGVSGNNLADS Trigger: TGAATCTGCTAAATTATTACCTGATACACCCGTTCAATTCATACCTCCAAATACATTGAACCTTCGTAGCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 ENST00000491996.1 |
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| CDS GCA 72 bp | TTGTCAATATTGCTGATTTCTTTATTATTAGCTCTTTaGTCTAGTGTCGAAGAATTCCAGTCATCATCAGGA | + |
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Preference number: 6 (lower is better) Translates to: LSILLISLLLAL*SSVEEFQSSSG Trigger: TCCTGATGATGACTGGAATTCTTCGACACTAGAGCAAAGAGCTAATAATAAAGAAATCAGCAATATTGACAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000316997.9 ENST00000409864.6 ENST00000480583.5 |
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